BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5165
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90XF2|KPCI_DANRE Protein kinase C iota type OS=Danio rerio GN=prkci PE=2 SV=2
Length = 588
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 57/71 (80%)
Query: 88 SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
++ IT+ +P I+Y+ L EV++MC DQ+FT+KW+DEEGDPC +S+Q+ELEEA+RLY
Sbjct: 27 GDIMITHFEPSISYEGLCNEVRDMCSMDNDQLFTMKWIDEEGDPCTVSSQLELEEALRLY 86
Query: 148 EVNHEPELVIH 158
E+N + EL+IH
Sbjct: 87 ELNKDSELIIH 97
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 19/21 (90%)
Query: 1 MELEEAIRLYEVNHEPELVIH 21
+ELEEA+RLYE+N + EL+IH
Sbjct: 77 LELEEALRLYELNKDSELIIH 97
>sp|Q5R4K9|KPCI_PONAB Protein kinase C iota type OS=Pongo abelii GN=PRKCI PE=2 SV=2
Length = 596
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 57/71 (80%)
Query: 88 SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
++ IT+ +P I+++ L EV++MC F +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 34 GDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLY 93
Query: 148 EVNHEPELVIH 158
E+N + EL+IH
Sbjct: 94 ELNKDSELLIH 104
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 1 MELEEAIRLYEVNHEPELVIH 21
+ELEEA RLYE+N + EL+IH
Sbjct: 84 LELEEAFRLYELNKDSELLIH 104
>sp|P41743|KPCI_HUMAN Protein kinase C iota type OS=Homo sapiens GN=PRKCI PE=1 SV=2
Length = 596
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 57/71 (80%)
Query: 88 SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
++ IT+ +P I+++ L EV++MC F +Q+FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 34 GDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLY 93
Query: 148 EVNHEPELVIH 158
E+N + EL+IH
Sbjct: 94 ELNKDSELLIH 104
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 1 MELEEAIRLYEVNHEPELVIH 21
+ELEEA RLYE+N + EL+IH
Sbjct: 84 LELEEAFRLYELNKDSELLIH 104
>sp|F1M7Y5|KPCI_RAT Protein kinase C iota type OS=Rattus norvegicus GN=Prkci PE=1 SV=1
Length = 596
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 56/71 (78%)
Query: 88 SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
++ IT+ +P I+++ L EV++MC F +Q FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 34 GDIMITHFEPSISFEGLCSEVRDMCSFDNEQPFTMKWIDEEGDPCTVSSQLELEEAFRLY 93
Query: 148 EVNHEPELVIH 158
E+N + EL+IH
Sbjct: 94 ELNKDSELLIH 104
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 1 MELEEAIRLYEVNHEPELVIH 21
+ELEEA RLYE+N + EL+IH
Sbjct: 84 LELEEAFRLYELNKDSELLIH 104
>sp|Q62074|KPCI_MOUSE Protein kinase C iota type OS=Mus musculus GN=Prkci PE=1 SV=3
Length = 595
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 56/71 (78%)
Query: 88 SEVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLY 147
++ IT+ +P I+++ L EV++MC F +Q FT+KW+DEEGDPC +S+Q+ELEEA RLY
Sbjct: 34 GDIMITHFEPSISFEGLCSEVRDMCSFDNEQPFTMKWIDEEGDPCTVSSQLELEEAFRLY 93
Query: 148 EVNHEPELVIH 158
E+N + EL+IH
Sbjct: 94 ELNKDSELLIH 104
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 1 MELEEAIRLYEVNHEPELVIH 21
+ELEEA RLYE+N + EL+IH
Sbjct: 84 LELEEAFRLYELNKDSELLIH 104
>sp|Q05513|KPCZ_HUMAN Protein kinase C zeta type OS=Homo sapiens GN=PRKCZ PE=1 SV=4
Length = 592
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
++FIT + T++ L EEV++MC+ T+KWVD EGDPC +S+QMELEEA RL
Sbjct: 25 DIFITSVDAATTFEELCEEVRDMCRLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLAR 84
Query: 149 VNHEPELVIH 158
+ L+IH
Sbjct: 85 QCRDEGLIIH 94
>sp|P09217|KPCZ_RAT Protein kinase C zeta type OS=Rattus norvegicus GN=Prkcz PE=1 SV=2
Length = 592
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
++ IT + P T+ L EEV++MC T+KWVD EGDPC +S+QMELEEA RL
Sbjct: 25 DILITSVDPTTTFQDLCEEVRDMCGLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLAC 84
Query: 149 VNHEPELVIH 158
+ L+IH
Sbjct: 85 QGRDEVLIIH 94
>sp|Q02956|KPCZ_MOUSE Protein kinase C zeta type OS=Mus musculus GN=Prkcz PE=1 SV=2
Length = 592
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
++ IT + T+ L EEV++MC T+KWVD EGDPC +S+QMELEEA RL
Sbjct: 25 DILITSVDAMTTFKDLCEEVRDMCGLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLVC 84
Query: 149 VNHEPELVIH 158
+ L+IH
Sbjct: 85 QGRDEVLIIH 94
>sp|O19111|KPCZ_RABIT Protein kinase C zeta type OS=Oryctolagus cuniculus GN=PRKCZ PE=2
SV=1
Length = 591
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
++FIT + T++ L EEV++MC T+KWVD EGDP +S+QMEL EA RL
Sbjct: 25 DIFITSVDAATTFEELCEEVRDMCGLHQHHPLTLKWVDSEGDPRTVSSQMELGEAFRLAG 84
Query: 149 VNHEPELVIH 158
+ + L++H
Sbjct: 85 QHRDDGLILH 94
>sp|A8WUG4|KPC3_CAEBR Protein kinase C-like 3 OS=Caenorhabditis briggsae GN=pkc-3 PE=3
SV=1
Length = 597
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
+V + Y +P + D +++ CK Q TVKW+DE+GDP I +QMEL+EA+R
Sbjct: 22 QVVVLYARPPLILDDFFALLRDACKQHAKQDITVKWIDEDGDPISIDSQMELDEAVRCLN 81
Query: 149 VNHEPELVIH 158
V+ E EL IH
Sbjct: 82 VSQEAELNIH 91
>sp|Q19266|KPC3_CAEEL Protein kinase C-like 3 OS=Caenorhabditis elegans GN=pkc-3 PE=1
SV=1
Length = 597
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
+V + Y +P + D +K+ CK Q TVKW+DE+GDP I +QMEL+EA+R
Sbjct: 22 QVVVLYARPPLILDDFFALLKDACKQHKKQDITVKWIDEDGDPISIDSQMELDEAVRCLN 81
Query: 149 VNHEPELVIH 158
+ E EL IH
Sbjct: 82 SSQEAELNIH 91
>sp|Q86IW5|Y7911_DICDI Transmembrane protein DDB_G0274347 OS=Dictyostelium discoideum
GN=DDB_G0274347 PE=4 SV=1
Length = 704
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 43 LFGITIFIVWQYSRKLQHRELVRKKRSYCKFLHISFTL 80
LFG+ +F+VW ++ +L +E++ K +FLH TL
Sbjct: 378 LFGVILFVVWLFATRLAEKEIIIKSNLPLQFLHSILTL 415
>sp|Q10S83|NLP1_ORYSJ Protein NLP1 OS=Oryza sativa subsp. japonica GN=NLP1 PE=2 SV=1
Length = 942
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 89 EVFITYIKPDITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYE 148
E I ++P + RL+EE+ + S D +K++D+E + L++ +L E I +Y+
Sbjct: 854 ERCIFRLQPSWGFQRLKEEIVKRFGISQDTHVDLKYLDDESEWVLLTCDADLLECIDVYK 913
>sp|Q5R8D5|TM183_PONAB Transmembrane protein 183 OS=Pongo abelii GN=TMEM183 PE=2 SV=2
Length = 387
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 102 DRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLI---STQMELEE 142
+ +Q+EVK +C QV T + + G+PC I S +ME +E
Sbjct: 61 NAVQQEVKSLCGLEASQVPTEEALSGAGEPCDIIDSSDEMEAQE 104
>sp|P97432|NBR1_MOUSE Next to BRCA1 gene 1 protein OS=Mus musculus GN=Nbr1 PE=1 SV=1
Length = 988
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 107 EVKEMCKFSTD-QVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTY 163
+V+ M K S D +K++DEE + I++Q E EEA+++ + +L + Y
Sbjct: 30 DVEAMVKVSFDLNTIQIKYLDEENEEISINSQGEYEEALKMANIKQGNQLQMQVHEGY 87
>sp|A1WSZ8|RF3_HALHL Peptide chain release factor 3 OS=Halorhodospira halophila (strain
DSM 244 / SL1) GN=prfC PE=3 SV=1
Length = 517
Score = 32.0 bits (71), Expect = 2.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 98 DITYDRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCL 133
D+ RLQ+E C F QV+T +WV E + L
Sbjct: 435 DVAAYRLQKEYGVECTFEGVQVYTARWVSAEDEKAL 470
>sp|Q501R9|NBR1_RAT Next to BRCA1 gene 1 protein OS=Rattus norvegicus GN=Nbr1 PE=1 SV=1
Length = 983
Score = 31.6 bits (70), Expect = 2.8, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 107 EVKEMCKFSTD-QVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPEL 155
+V+ M K S D +K++DEE + I++Q E EEA+++ + +L
Sbjct: 30 DVEAMVKVSFDLNTIQIKYLDEENEEISINSQGEYEEALKMANIKQGNQL 79
>sp|Q04958|NTE1_YEAST Lysophospholipase NTE1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NTE1 PE=1 SV=1
Length = 1679
Score = 30.8 bits (68), Expect = 4.8, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 26 TWQWWNKFWRTWAPVPTLFGITIFIVWQYSRKLQHRELVR-KKRSYCKFLHISFTLHCYF 84
TW + F +W + G + I ++Y L L+R K + K H+ FTL +
Sbjct: 50 TWSLSSLFNFSWVVSYFVMGASRMI-FRYGWYLATLSLLRIPKWIFFKLHHVQFTLSFWL 108
Query: 85 IIFSEVFITYIKPDITYDRLQEEVKEM 111
I+F+ I ++ I +R+ + K +
Sbjct: 109 ILFALAVIVFVTYTIMKERILSQYKRL 135
>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1
Length = 730
Score = 30.4 bits (67), Expect = 5.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 117 DQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPELVIHGKSTY 163
+Q+ T+ ++D+EGD + + +L EAI L P L + G + +
Sbjct: 610 EQLVTLTYIDDEGDVVELVSDSDLREAILLARRRGLPRLEVRGVAAF 656
>sp|Q14596|NBR1_HUMAN Next to BRCA1 gene 1 protein OS=Homo sapiens GN=NBR1 PE=1 SV=3
Length = 966
Score = 30.4 bits (67), Expect = 6.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 107 EVKEMCKFSTD-QVFTVKWVDEEGDPCLISTQMELEEAIRL 146
+++ M K S D +K++DEE + I++Q E EEA+++
Sbjct: 30 DIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEALKM 70
>sp|Q5RC94|NBR1_PONAB Next to BRCA1 gene 1 protein OS=Pongo abelii GN=NBR1 PE=2 SV=1
Length = 894
Score = 30.4 bits (67), Expect = 6.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 107 EVKEMCKFSTD-QVFTVKWVDEEGDPCLISTQMELEEAIRL 146
+++ M K S D +K++DEE + I++Q E EEA+++
Sbjct: 30 DIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEALKM 70
>sp|Q6FY25|SP110_CANGA Spindle pole body component 110 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPC110 PE=3 SV=1
Length = 872
Score = 29.6 bits (65), Expect = 8.9, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 102 DRLQEEVKEMCKFSTDQVFTVKWVDEEGDPCLISTQMELEEAIRLYEVNHEPEL 155
D+L EEV E K V+ +DEE L ++Q EL++A + EV+HE E+
Sbjct: 495 DQLSEEVVEKDKEIDQLKHRVQRLDEE----LRTSQAELDKATKNREVDHELEI 544
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.467
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,178,829
Number of Sequences: 539616
Number of extensions: 2652970
Number of successful extensions: 7979
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7949
Number of HSP's gapped (non-prelim): 40
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)