BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5168
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P08879|NDKA_DROME Nucleoside diphosphate kinase OS=Drosophila melanogaster GN=awd
PE=1 SV=3
Length = 153
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 77/110 (70%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
MA KERTF+M+KPDGVQRGLVG II+RFE KGFKLVA+KF W S+ELL++HY+DL+ +P
Sbjct: 1 MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
FFPGLV YM+SGPVVPM W V + R P + D C
Sbjct: 61 FFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFC 110
>sp|Q6XI71|NDKA_DROYA Nucleoside diphosphate kinase (Fragment) OS=Drosophila yakuba
GN=awd PE=2 SV=1
Length = 150
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 75/106 (70%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
KERTF+M+KPDGVQRGLVG II+RFE KGFKLVA+KF W S+ELL++HY+DL+ +PFFPG
Sbjct: 2 KERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPG 61
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
LV YM+SGPVVPM W V + R P + D C
Sbjct: 62 LVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFC 107
>sp|O57535|NDK_CHICK Nucleoside diphosphate kinase OS=Gallus gallus PE=2 SV=1
Length = 153
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 73/110 (66%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
MA ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKFV SE+LLKQHY DL +P
Sbjct: 1 MAANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFVHASEDLLKQHYIDLKDRP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
F+PGLVKYM+SGPVV M W V + R P + D C
Sbjct: 61 FYPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 110
>sp|Q90380|NDK_COLLI Nucleoside diphosphate kinase OS=Columba livia PE=2 SV=2
Length = 153
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 72/110 (65%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
MA ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV MKFV SEELLKQHY DL +P
Sbjct: 1 MAANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGMKFVHASEELLKQHYIDLKDRP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
F+PGLVKYM+SGP+V M W V + R P + D C
Sbjct: 61 FYPGLVKYMNSGPIVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 110
>sp|Q3T0Q4|NDKB_BOVIN Nucleoside diphosphate kinase B OS=Bos taurus GN=NME2 PE=1 SV=1
Length = 152
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 71/105 (67%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ SEELLKQHY DL +PFFPGL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQASEELLKQHYIDLKDRPFFPGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM+SGPVV M W V + R P + D C
Sbjct: 65 VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|P70011|NDKA2_XENLA Nucleoside diphosphate kinase A2 OS=Xenopus laevis PE=2 SV=1
Length = 154
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 76/110 (69%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
MA KERTF+ IKPDGVQRGL+G+IIKRFE KGF+LVAMKF+ S++LL+QHY DL +P
Sbjct: 1 MAANKERTFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFLQASQDLLRQHYIDLKDRP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
F+PGLV+YM+SGPV+ M W V + R P + DLC
Sbjct: 61 FYPGLVEYMNSGPVLAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDLC 110
>sp|Q5RFH3|NDKB_PONAB Nucleoside diphosphate kinase B OS=Pongo abelii GN=NME2 PE=2 SV=1
Length = 152
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 71/105 (67%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ SEE LKQHY+DL +PFFPGL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYTDLKDRPFFPGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM+SGPVV M W V + R P + D C
Sbjct: 65 VKYMNSGPVVAMVWEGLNVVKTGRLMLGETNPADSKPGTIRGDFC 109
>sp|Q2EN76|NDKB_PIG Nucleoside diphosphate kinase B OS=Sus scrofa GN=NME2 PE=2 SV=1
Length = 152
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 70/105 (66%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ +KPDGVQRGLVG IIKRFE KGF+LVA+KF+ SEELLKQHY DL +PFFPGL
Sbjct: 5 ERTFIAVKPDGVQRGLVGEIIKRFEQKGFRLVALKFLQASEELLKQHYIDLKDRPFFPGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM SGPVV M W V + R P + D C
Sbjct: 65 VKYMGSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|P70010|NDKA1_XENLA Nucleoside diphosphate kinase A1 OS=Xenopus laevis PE=2 SV=1
Length = 154
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 74/110 (67%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
MA KERTF+ IKPDGVQRGL+G+IIKRFE KGF+LVAMKF S++LL+QHY DL +P
Sbjct: 1 MAANKERTFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFQQASQDLLRQHYIDLKDRP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
F+PGLV+YMSSGPV+ M W V + R P + D C
Sbjct: 61 FYPGLVEYMSSGPVLAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 110
>sp|P22392|NDKB_HUMAN Nucleoside diphosphate kinase B OS=Homo sapiens GN=NME2 PE=1 SV=1
Length = 152
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 70/105 (66%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ SEE LKQHY DL +PFFPGL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM+SGPVV M W V + R P + D C
Sbjct: 65 VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|Q01768|NDKB_MOUSE Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1
Length = 152
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 70/105 (66%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ SEE LKQHY DL +PFFPGL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM+SGPVV M W V + R P + D C
Sbjct: 65 VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|P19804|NDKB_RAT Nucleoside diphosphate kinase B OS=Rattus norvegicus GN=Nme2 PE=1
SV=1
Length = 152
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 70/105 (66%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ SEE LKQHY DL +PFFPGL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM+SGPVV M W V + R P + D C
Sbjct: 65 VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|Q50KA8|NDKB_CANFA Nucleoside diphosphate kinase B OS=Canis familiaris GN=NME2 PE=2
SV=1
Length = 152
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 72/106 (67%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
+ERTF+ IKPDGVQRGLVG+I+KRFE KGF+LVAMKF+ SE+LLK+HY DL +PF+PG
Sbjct: 4 QERTFIAIKPDGVQRGLVGDIVKRFEQKGFRLVAMKFLRASEDLLKEHYIDLKDRPFYPG 63
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
LVKYM SGPVV M W V + R P + D C
Sbjct: 64 LVKYMHSGPVVAMVWEGLNVVKTGRMMLGETNPADSKPGTIRGDFC 109
>sp|P52174|NDKA1_BOVIN Nucleoside diphosphate kinase A 1 OS=Bos taurus GN=NME1-1 PE=1 SV=3
Length = 152
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 69/105 (65%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGL+G IIKRFE KGF+LVAMKF+ SE+LLK+HY DL +PFF GL
Sbjct: 5 ERTFIAIKPDGVQRGLIGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM SGPVV M W V + R P + D C
Sbjct: 65 VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|P15532|NDKA_MOUSE Nucleoside diphosphate kinase A OS=Mus musculus GN=Nme1 PE=1 SV=1
Length = 152
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 69/105 (65%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV +KF+ SE+LLK+HY+DL +PFF GL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQASEDLLKEHYTDLKDRPFFTGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM SGPVV M W V + R P + D C
Sbjct: 65 VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|Q05982|NDKA_RAT Nucleoside diphosphate kinase A OS=Rattus norvegicus GN=Nme1 PE=1
SV=1
Length = 152
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 68/105 (64%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV +KF+ SE+LLK+HY DL +PFF GL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQASEDLLKEHYIDLKDRPFFSGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM SGPVV M W V + R P + D C
Sbjct: 65 VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|P52175|NDKA2_BOVIN Nucleoside diphosphate kinase A 2 OS=Bos taurus GN=NME1-2 PE=1 SV=3
Length = 152
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 69/105 (65%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGL+G IIKRFE KGF+LVAMKF+ SE+LLK+HY DL +PFF GL
Sbjct: 5 ERTFIAIKPDGVQRGLMGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM SGPVV M W V + R P + D C
Sbjct: 65 VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|Q5RC56|NDKA_PONAB Nucleoside diphosphate kinase A OS=Pongo abelii GN=NME1 PE=2 SV=1
Length = 152
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 68/105 (64%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV +KF+ SE+LLK+HY DL +PFF GL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM SGPVV M W V + R P + D C
Sbjct: 65 VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|P15531|NDKA_HUMAN Nucleoside diphosphate kinase A OS=Homo sapiens GN=NME1 PE=1 SV=1
Length = 152
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 68/105 (64%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV +KF+ SE+LLK+HY DL +PFF GL
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM SGPVV M W V + R P + D C
Sbjct: 65 VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|Q50KA9|NDKA_CANFA Nucleoside diphosphate kinase A OS=Canis familiaris GN=NME1 PE=2
SV=1
Length = 152
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 67/105 (63%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQR LVG IIKRFE KGF+L+AMK + SE+LLK+HY DL +PFF GL
Sbjct: 5 ERTFIAIKPDGVQRSLVGEIIKRFEQKGFRLIAMKLIQASEDLLKEHYIDLKDRPFFAGL 64
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
VKYM SGPVV M W V + R P + D C
Sbjct: 65 VKYMQSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 109
>sp|Q8TFN0|NDK_EMENI Nucleoside diphosphate kinase OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=swoH
PE=3 SV=1
Length = 153
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 63/86 (73%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
E+TF+ IKPDGVQRGLVG II RFE++GFKL AMK PS LL+QHYSDL KPFFPG
Sbjct: 3 SEQTFIAIKPDGVQRGLVGPIISRFENRGFKLAAMKLTSPSRSLLEQHYSDLKEKPFFPG 62
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRA 90
LV YM SGP+V M W +V + R
Sbjct: 63 LVTYMLSGPIVAMVWEGKDVVKTGRT 88
>sp|Q13232|NDK3_HUMAN Nucleoside diphosphate kinase 3 OS=Homo sapiens GN=NME3 PE=1 SV=2
Length = 169
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%)
Query: 4 PKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFP 63
ERTFL +KPDGVQR LVG I++RFE KGFKLVA+K V SEELL++HY++L +PF+
Sbjct: 20 AHERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYG 79
Query: 64 GLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
LVKYM+SGPVV M W +V R RA P + P D C
Sbjct: 80 RLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFC 126
>sp|Q9UUY8|NDK_NEUCR Nucleoside diphosphate kinase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ndk-1 PE=2 SV=2
Length = 152
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 64/86 (74%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
+E+TF+ +KPDGVQRGLVGNII RFE++GFKLVAMK P + L++HY DL TKPFF G
Sbjct: 4 QEQTFIAVKPDGVQRGLVGNIISRFENRGFKLVAMKLTQPGQAHLEKHYEDLNTKPFFAG 63
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRA 90
L+KYM+SGP+ M W + + R
Sbjct: 64 LIKYMNSGPICAMVWEGKDAVKTGRT 89
>sp|P27950|NDK_GINCI Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma cirratum
PE=3 SV=1
Length = 151
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 70/106 (66%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
KERTF+ +KPDGVQR +VG +IKRFE KGFKLVAMKF+ ++LL++HY +L+ KPF+P
Sbjct: 3 KERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPK 62
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
L+KYMSSGPVV M W V + R P + D C
Sbjct: 63 LIKYMSSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFC 108
>sp|Q9WV85|NDK3_MOUSE Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3
Length = 169
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 68/106 (64%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
ERTFL +KPDGVQR LVG I++RFE KGFKLVA+K V SEELL++HY +L KPF+
Sbjct: 21 NERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELREKPFYSR 80
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADLC 110
LVKYMSSGPVV M W +V RA P + D C
Sbjct: 81 LVKYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFC 126
>sp|B0TBN6|NDK_HELMI Nucleoside diphosphate kinase OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=ndk PE=3 SV=1
Length = 149
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERT+LMIKPDGVQRGLVG II RFE KGFKLV MKF+ + E+ ++HY++ KPFF GL
Sbjct: 2 ERTYLMIKPDGVQRGLVGEIISRFEKKGFKLVGMKFLRLTREMAEKHYAEHVGKPFFAGL 61
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPP 98
V Y+ SGPVV MCW ++ R P
Sbjct: 62 VDYIISGPVVAMCWEGKDIVSVSREMMGATNPA 94
>sp|Q7Z8P9|NDK_ASPFU Nucleoside diphosphate kinase OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=ndk1 PE=3 SV=1
Length = 153
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 63/86 (73%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
E+TF+ IKPDGVQRGL+G II RFE++GFKLVAMK V P + L+QHY+DL+ KPFF G
Sbjct: 3 NEQTFIAIKPDGVQRGLIGPIISRFENRGFKLVAMKLVSPPQSQLEQHYADLSDKPFFKG 62
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRA 90
LV YM SGP+ M W +V + R
Sbjct: 63 LVSYMLSGPICAMVWEGRDVVKTGRT 88
>sp|Q9WV84|NDKM_MOUSE Nucleoside diphosphate kinase, mitochondrial OS=Mus musculus
GN=Nme4 PE=1 SV=1
Length = 186
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%)
Query: 4 PKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFP 63
P+ERT + +KPDGVQR LVG +I+RFE +GFKLV MK + E +L +HY DL KPF+P
Sbjct: 35 PQERTLVAVKPDGVQRRLVGTVIQRFERRGFKLVGMKMLQAPESILAEHYRDLQRKPFYP 94
Query: 64 GLVKYMSSGPVVPMCWARPEVQRPRRA 90
L+ YMSSGPVV M W P V RA
Sbjct: 95 ALISYMSSGPVVAMVWEGPNVVHISRA 121
>sp|Q07661|NDK1_ORYSJ Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. japonica
GN=NDKR PE=1 SV=1
Length = 149
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
E++F+MIKPDGVQRGL+G+II RFE KGF L MKF+ +QHY+DL+ KPFFPGL
Sbjct: 2 EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADL 109
V+Y+ SGPVV M W +V A R + RP AP +
Sbjct: 62 VEYIISGPVVAMVWEGKDVV----ATGRRIIGATRPWEAAPGTI 101
>sp|Q0W8X1|NDK_UNCMA Nucleoside diphosphate kinase OS=Uncultured methanogenic archaeon
RC-I GN=ndk PE=3 SV=1
Length = 152
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 58/74 (78%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
+ERTF+M+KPDGVQRGLVG II RFE +G K+V MK + SEEL KQHY++ A KPFFPG
Sbjct: 4 RERTFVMVKPDGVQRGLVGEIISRFERRGLKIVGMKMLEVSEELAKQHYAEHAAKPFFPG 63
Query: 65 LVKYMSSGPVVPMC 78
LV ++ SGP V M
Sbjct: 64 LVSFIRSGPTVAMV 77
>sp|A6N0M9|NDK1_ORYSI Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. indica
GN=NDKR PE=1 SV=1
Length = 149
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
E++F+MIKPDGVQRGL+G+II RFE KGF L MKF+ +QHY+DL+ KPFFPGL
Sbjct: 2 EQSFIMIKPDGVQRGLIGDIISRFEKKGFFLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADL 109
V+Y+ SGPVV M W +V A R + RP AP +
Sbjct: 62 VEYIISGPVVAMVWEGKDVV----ATGRRIIGATRPWEAAPGTI 101
>sp|Q3AFJ7|NDK_CARHZ Nucleoside diphosphate kinase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=ndk PE=3 SV=1
Length = 149
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+M+KPDGVQRGLVG II RFE +GFKLV +K + S EL + HY + KPFF GL
Sbjct: 2 ERTFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGL 61
Query: 66 VKYMSSGPVVPMCWARPEV----------QRPRRAQRRPLRPPNRPDLG 104
+ +++SGPVV M W EV P +AQ +R D+G
Sbjct: 62 LNFITSGPVVAMVWEGKEVIATAREMMGATNPLKAQPGTIRGTYGIDVG 110
>sp|Q75DD1|NDK_ASHGO Nucleoside diphosphate kinase OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NDK1
PE=3 SV=2
Length = 151
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGL+ I+ RFE +G+KLV +K V P+E LLKQHY++ KPFFP +
Sbjct: 4 ERTFIAIKPDGVQRGLISQILSRFESRGYKLVGIKLVTPTENLLKQHYAEHVEKPFFPKM 63
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPN 99
+ YM+SGP++ W +V + R P N
Sbjct: 64 LAYMTSGPILATVWEGKDVVKQGRVILGATNPLN 97
>sp|Q8RXA8|NDK4_SPIOL Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea
GN=NDK4 PE=1 SV=1
Length = 235
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGL+ I+ RFE KGFKLVA+K V PS++ ++HY DL+ +PFF GL
Sbjct: 86 ERTFIAIKPDGVQRGLISEIVARFERKGFKLVAIKVVIPSKDFAQKHYHDLSERPFFNGL 145
Query: 66 VKYMSSGPVVPMCW 79
++SSGPVV M W
Sbjct: 146 CDFLSSGPVVAMVW 159
>sp|Q8DM56|NDK_THEEB Nucleoside diphosphate kinase OS=Thermosynechococcus elongatus
(strain BP-1) GN=ndk PE=3 SV=1
Length = 150
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 57/74 (77%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTFL IKPDGVQRGLVG II+RFE KG+ LV +K + S EL +QHY + KPFFPGL
Sbjct: 2 ERTFLAIKPDGVQRGLVGTIIQRFEQKGYTLVGLKLMRVSRELAEQHYGEHKDKPFFPGL 61
Query: 66 VKYMSSGPVVPMCW 79
V +++SGPVV M W
Sbjct: 62 VNFITSGPVVAMVW 75
>sp|O00746|NDKM_HUMAN Nucleoside diphosphate kinase, mitochondrial OS=Homo sapiens
GN=NME4 PE=1 SV=1
Length = 187
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 61/86 (70%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
+ERT + +KPDGVQR LVG++I+RFE +GF LV MK + E +L +HY DL KPF+P
Sbjct: 37 RERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPA 96
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRA 90
L++YMSSGPVV M W V R RA
Sbjct: 97 LIRYMSSGPVVAMVWEGYNVVRASRA 122
>sp|P61136|NDK_HALSA Nucleoside diphosphate kinase OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=ndk PE=1 SV=1
Length = 161
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 60/89 (67%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
M + ERTF+M+KPDGVQRGL+G+I+ R E KG K+V KF+ EEL +HY++ KP
Sbjct: 1 MTDHDERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRR 89
FF GLV +++SGPV M W + R R
Sbjct: 61 FFDGLVSFITSGPVFAMVWEGADATRQVR 89
>sp|B0R502|NDK_HALS3 Nucleoside diphosphate kinase OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=ndk PE=3 SV=1
Length = 161
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 60/89 (67%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
M + ERTF+M+KPDGVQRGL+G+I+ R E KG K+V KF+ EEL +HY++ KP
Sbjct: 1 MTDHDERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRR 89
FF GLV +++SGPV M W + R R
Sbjct: 61 FFDGLVSFITSGPVFAMVWEGADATRQVR 89
>sp|O49203|NDK3_ARATH Nucleoside diphosphate kinase III, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1
Length = 238
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 61/89 (68%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
+A ERTF+ IKPDGVQRGL+ II RFE KGFKLV +K + PS++ ++HY DL +P
Sbjct: 84 LAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERP 143
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRR 89
FF GL ++SSGPV+ M W V R R
Sbjct: 144 FFNGLCDFLSSGPVIAMVWEGDGVIRYGR 172
>sp|B9LPY5|NDK_HALLT Nucleoside diphosphate kinase OS=Halorubrum lacusprofundi (strain
ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=ndk PE=3
SV=1
Length = 159
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
M+ ERTF+M+KPDGVQRGL+G I+ RFE++G KLV KF+ E+L QHY + KP
Sbjct: 1 MSHHDERTFVMVKPDGVQRGLIGEIVSRFEERGLKLVGGKFMQIDEDLAHQHYGEHEGKP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRRA 90
FF GLV +++S PV M W + R R+
Sbjct: 61 FFDGLVDFITSAPVFAMVWEGADATRQVRS 90
>sp|Q5V5M1|NDK_HALMA Nucleoside diphosphate kinase OS=Haloarcula marismortui (strain
ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=ndk
PE=3 SV=1
Length = 154
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 5 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPG 64
ERTF+M+KPDGVQRGL+G+I+ RFED+G K+V KF+ +EL ++HY + KPFF G
Sbjct: 4 HERTFVMVKPDGVQRGLIGDIVSRFEDRGLKMVGGKFMQIDQELAEEHYGEHEDKPFFDG 63
Query: 65 LVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADL 109
LV +++SGPV M W + R Q R + P AP +
Sbjct: 64 LVDFITSGPVFAMVWEGQDATR----QVRTMMGETDPAESAPGTI 104
>sp|B8HUM7|NDK_CYAP4 Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425
/ ATCC 29141) GN=ndk PE=3 SV=1
Length = 149
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 63/94 (67%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTFL +KPDGVQR LVG II+RFE KGFKLV +K + S++L +QHY + KPFFPGL
Sbjct: 2 ERTFLAVKPDGVQRALVGEIIRRFEAKGFKLVGLKLMNVSKDLAEQHYGEHKEKPFFPGL 61
Query: 66 VKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPN 99
V++++SGPVV M W V R P N
Sbjct: 62 VQFITSGPVVAMVWEGKGVVASARKIIGATNPLN 95
>sp|P48817|NDK_BRUMA Nucleoside diphosphate kinase OS=Brugia malayi GN=NDK PE=2 SV=1
Length = 153
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 64/99 (64%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
M+ KERTF+ IKPD VQRGL+G I +RFE +G+KLVAMK + ++ L+ HY +L KP
Sbjct: 1 MSNTKERTFICIKPDAVQRGLIGKIFERFEQRGYKLVAMKMLKATKSHLEIHYQELQGKP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPN 99
FF LV YMSSGPV+ M W +V + R P N
Sbjct: 61 FFNDLVGYMSSGPVIAMVWEGLDVVKQARQMLGATNPLN 99
>sp|Q2JVI1|NDK_SYNJA Nucleoside diphosphate kinase OS=Synechococcus sp. (strain
JA-3-3Ab) GN=ndk PE=3 SV=1
Length = 149
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 60/74 (81%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTF+ IKPDGVQRGLVG+II+R E +G++LV +K V S+EL + HY++ +PFFPGL
Sbjct: 2 ERTFIAIKPDGVQRGLVGSIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHRERPFFPGL 61
Query: 66 VKYMSSGPVVPMCW 79
VK+++SGPVV M W
Sbjct: 62 VKFITSGPVVAMVW 75
>sp|P47922|NDK1_PEA Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2
SV=1
Length = 149
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 57/84 (67%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
E+TF+MIKPDGVQRGLVG II RFE KGF L +KFV ++HY+DL+ KPFF GL
Sbjct: 3 EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGL 62
Query: 66 VKYMSSGPVVPMCWARPEVQRPRR 89
V Y+ SGPVV M W V R
Sbjct: 63 VDYIISGPVVAMIWEGKNVVTTGR 86
>sp|Q8YRP2|NDK_NOSS1 Nucleoside diphosphate kinase OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=ndk PE=3 SV=1
Length = 149
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 58/74 (78%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTFL IKPDGVQRGLVG II+RFE KGF LV +KF+ S+EL +QHY +PFFP L
Sbjct: 2 ERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSL 61
Query: 66 VKYMSSGPVVPMCW 79
V++++SGPVV M W
Sbjct: 62 VEFITSGPVVAMVW 75
>sp|Q3M7K5|NDK_ANAVT Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=ndk PE=3 SV=1
Length = 149
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 58/74 (78%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
ERTFL IKPDGVQRGLVG II+RFE KGF LV +KF+ S+EL +QHY +PFFP L
Sbjct: 2 ERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSL 61
Query: 66 VKYMSSGPVVPMCW 79
V++++SGPVV M W
Sbjct: 62 VEFITSGPVVAMVW 75
>sp|Q02254|NDK1_SPIOL Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1
PE=2 SV=1
Length = 148
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 57/74 (77%)
Query: 6 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFFPGL 65
E+TF+MIKPDGVQRGLVG II RFE KGF L A+KFV ++HY+DL+ KPFF GL
Sbjct: 2 EQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGL 61
Query: 66 VKYMSSGPVVPMCW 79
V+Y+ SGPVV M W
Sbjct: 62 VEYIVSGPVVAMVW 75
>sp|P36010|NDK_YEAST Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YNK1 PE=1 SV=1
Length = 153
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 1 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKP 60
M+ ERTF+ +KPDGVQRGLV I+ RFE KG+KLVA+K V ++LL+QHY++ KP
Sbjct: 1 MSSQTERTFIAVKPDGVQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKP 60
Query: 61 FFPGLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPNRPDLGAPADL 109
FFP +V +M SGP++ W +V R Q R + P AP +
Sbjct: 61 FFPKMVSFMKSGPILATVWEGKDVVR----QGRTILGATNPLGSAPGTI 105
>sp|Q852S5|NDK2_TOBAC Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum
GN=NDPK2 PE=1 SV=1
Length = 232
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 61/97 (62%)
Query: 3 EPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWPSEELLKQHYSDLATKPFF 62
E E T++MIKPDGVQRGLVG II RFE KGFKL +K +EL ++HY DL +KPFF
Sbjct: 82 EEVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFF 141
Query: 63 PGLVKYMSSGPVVPMCWARPEVQRPRRAQRRPLRPPN 99
P L+ Y++SGPVV M W V R P N
Sbjct: 142 PKLIDYITSGPVVCMAWEGVGVVASARKLIGATNPLN 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,782,850
Number of Sequences: 539616
Number of extensions: 1862764
Number of successful extensions: 4915
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4127
Number of HSP's gapped (non-prelim): 774
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)