Query psy5169
Match_columns 94
No_of_seqs 141 out of 1043
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 19:07:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2if5_A Zinc finger and BTB dom 99.9 5.5E-28 1.9E-32 146.2 6.5 88 6-93 2-90 (120)
2 3ohu_A Transcription regulator 99.9 2.8E-27 9.6E-32 144.0 8.9 91 2-93 5-96 (125)
3 1r29_A B-cell lymphoma 6 prote 99.9 1.7E-27 5.8E-32 145.3 7.6 90 4-93 4-94 (127)
4 2ppi_A Gigaxonin; BTB domain, 99.9 3.7E-27 1.3E-31 147.2 6.9 91 3-93 21-114 (144)
5 3fkc_A Transcriptional regulat 99.9 7.2E-27 2.5E-31 141.1 7.8 87 2-92 4-90 (116)
6 2ihc_A Transcription regulator 99.9 4.8E-27 1.6E-31 143.1 6.9 90 3-93 3-93 (124)
7 3b84_A Zinc finger and BTB dom 99.9 1.5E-27 5.2E-32 144.4 4.3 85 6-93 1-85 (119)
8 3ga1_A Nucleus accumbens-assoc 99.9 7E-27 2.4E-31 143.2 6.9 90 1-93 5-95 (129)
9 2z8h_A Transcription regulator 99.9 1E-26 3.5E-31 143.9 6.6 90 3-93 10-100 (138)
10 1buo_A POZ domain, protein (pr 99.9 1.1E-26 3.8E-31 140.9 6.5 86 4-93 3-88 (121)
11 2yy9_A Zinc finger and BTB dom 99.9 4.8E-26 1.7E-30 140.6 6.3 83 8-93 4-86 (135)
12 3hve_A Gigaxonin; ubiquitin, c 99.9 1.1E-25 3.9E-30 150.8 7.3 93 1-93 3-98 (256)
13 2vpk_A Myoneurin; transcriptio 99.9 6.8E-26 2.3E-30 136.3 5.5 82 9-93 2-85 (116)
14 2q81_A MIZ-1 protein; BTB/POZ 99.9 5.2E-26 1.8E-30 137.6 3.5 85 5-93 3-87 (119)
15 3i3n_A Kelch-like protein 11; 99.9 8.9E-25 3E-29 148.1 6.3 91 3-93 6-106 (279)
16 2vkp_A BTB/POZ domain-containi 99.9 3.6E-24 1.2E-28 127.2 4.8 72 22-93 1-76 (109)
17 3htm_A Speckle-type POZ protei 99.9 4.9E-24 1.7E-28 135.1 4.9 85 9-93 14-99 (172)
18 4eoz_A Speckle-type POZ protei 99.9 3.1E-24 1.1E-28 132.7 2.1 82 12-93 8-90 (145)
19 3m5b_A Zinc finger and BTB dom 99.9 1.4E-22 4.9E-27 122.9 7.3 79 5-93 8-86 (119)
20 3hqi_A Speckle-type POZ protei 99.9 8.2E-22 2.8E-26 135.1 6.5 81 13-93 158-239 (312)
21 4ajy_C Transcription elongatio 99.3 6.6E-12 2.2E-16 73.3 4.8 56 32-88 4-63 (97)
22 2ast_A S-phase kinase-associat 99.1 9.9E-11 3.4E-15 73.8 4.8 59 32-91 3-65 (159)
23 1hv2_A Elongin C, ELC1; protei 98.6 8.3E-08 2.9E-12 56.1 5.1 57 32-89 6-63 (99)
24 1fs1_B SKP1, cyclin A/CDK2-ass 98.5 7.7E-08 2.6E-12 59.4 3.6 55 32-90 4-59 (141)
25 2fnj_C Transcription elongatio 98.4 2.1E-07 7.1E-12 54.1 3.9 57 32-89 3-63 (96)
26 2p1m_A SKP1-like protein 1A; F 98.4 5.7E-08 1.9E-12 61.2 0.6 57 32-91 6-63 (160)
27 1vcb_B Protein (elongin C); tu 97.9 1.8E-05 6.3E-10 47.0 5.0 57 31-88 18-78 (112)
28 3v7d_A Suppressor of kinetocho 97.7 3.9E-05 1.3E-09 48.6 4.1 57 31-88 8-70 (169)
29 3drz_A BTB/POZ domain-containi 97.4 0.00016 5.4E-09 42.5 3.8 62 32-93 8-74 (107)
30 3kvt_A Potassium channel prote 95.6 0.0064 2.2E-07 36.1 2.3 62 32-93 7-70 (115)
31 3drx_A BTB/POZ domain-containi 93.5 0.025 8.6E-07 36.7 1.4 67 27-93 8-80 (202)
32 1s1g_A Potassium voltage-gated 92.1 0.14 4.9E-06 30.5 3.2 60 31-93 14-77 (124)
33 1t1d_A Protein (potassium chan 90.0 0.057 1.9E-06 31.1 -0.0 62 32-93 3-67 (100)
34 2nz0_B Potassium voltage-gated 89.9 0.22 7.5E-06 30.4 2.6 60 31-93 36-99 (140)
35 1nn7_A Potassium channel KV4.2 88.5 0.091 3.1E-06 30.4 0.1 59 32-93 2-64 (105)
36 2r9r_B Paddle chimera voltage 58.5 3.1 0.00011 30.2 0.9 59 32-93 54-118 (514)
37 1o6d_A Hypothetical UPF0247 pr 36.1 30 0.001 21.4 2.7 24 13-38 80-103 (163)
38 1ns5_A Hypothetical protein YB 33.9 29 0.001 21.2 2.4 24 13-38 81-104 (155)
39 1taf_A TFIID TBP associated fa 30.0 23 0.00079 18.7 1.3 16 73-88 17-32 (68)
40 2g2c_A Putative molybdenum cof 27.2 85 0.0029 18.9 3.8 29 9-39 51-79 (167)
41 3p04_A Uncharacterized BCR; SE 26.4 27 0.00091 19.4 1.2 24 68-91 30-54 (87)
42 2l9d_A Uncharacterized protein 24.9 4.5 0.00016 23.5 -2.3 37 51-88 49-86 (108)
43 1to0_A Hypothetical UPF0247 pr 24.8 98 0.0034 19.1 3.7 25 13-38 85-109 (167)
44 2lci_A Protein OR36; structura 23.2 1.1E+02 0.0038 17.3 4.0 39 2-40 24-62 (134)
45 3gva_A Alkyltransferase-like p 22.2 11 0.00039 22.0 -0.9 12 40-51 53-64 (116)
46 1k8k_G P16, ARP2/3 complex 16 22.1 28 0.00096 21.4 0.8 20 71-90 94-113 (151)
47 1wrj_A Methylated-DNA--protein 20.8 12 0.00042 23.0 -1.1 12 40-51 117-128 (156)
48 3l00_A SNAP-TAG; protein TAG, 20.8 14 0.00048 23.4 -0.8 13 40-52 145-157 (182)
No 1
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.95 E-value=5.5e-28 Score=146.17 Aligned_cols=88 Identities=19% Similarity=0.317 Sum_probs=78.6
Q ss_pred eeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCcc-ccCCCCHHHHHHhh
Q psy5169 6 SLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTN-FLSSFAFKIFECLV 84 (94)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~-~l~~v~~~~~~~ll 84 (94)
.++|++|++.+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.+++.|+.... .++++++++|+.+|
T Consensus 2 ~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll 81 (120)
T 2if5_A 2 GIPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALM 81 (120)
T ss_dssp CCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHH
T ss_pred CcCccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999888876655 99999999999999
Q ss_pred hhhcCCeec
Q psy5169 85 YFWTPCTVK 93 (94)
Q Consensus 85 ~fly~~~v~ 93 (94)
+|+|||++.
T Consensus 82 ~~~Yt~~~~ 90 (120)
T 2if5_A 82 DFAYTATLT 90 (120)
T ss_dssp HHHHHSCCC
T ss_pred HHHcCCCCc
Confidence 999999874
No 2
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.94 E-value=2.8e-27 Score=144.04 Aligned_cols=91 Identities=23% Similarity=0.309 Sum_probs=83.4
Q ss_pred CCeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCC-CCHHHH
Q psy5169 2 PEQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSS-FAFKIF 80 (94)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~-v~~~~~ 80 (94)
+..+.+++++|...+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.+++.+ ...+.+++ +++++|
T Consensus 5 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~~~~f 83 (125)
T 3ohu_A 5 SPMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVTARGF 83 (125)
T ss_dssp CCCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCCHHHH
T ss_pred CcceeeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCCHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999998776 34458887 999999
Q ss_pred HHhhhhhcCCeec
Q psy5169 81 ECLVYFWTPCTVK 93 (94)
Q Consensus 81 ~~ll~fly~~~v~ 93 (94)
+.+|+|+|||++.
T Consensus 84 ~~~l~~iYtg~~~ 96 (125)
T 3ohu_A 84 GPLLQFAYTAKLL 96 (125)
T ss_dssp HHHHHHHTTSEEE
T ss_pred HHHHHhHcCCceE
Confidence 9999999999874
No 3
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.94 E-value=1.7e-27 Score=145.35 Aligned_cols=90 Identities=19% Similarity=0.281 Sum_probs=83.0
Q ss_pred eeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCcccc-CCCCHHHHHH
Q psy5169 4 QYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFL-SSFAFKIFEC 82 (94)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l-~~v~~~~~~~ 82 (94)
...++|++|+..+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.+++.|....+.+ +++++++|+.
T Consensus 4 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f~~ 83 (127)
T 1r29_A 4 DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNI 83 (127)
T ss_dssp -CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHH
T ss_pred CccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999998884455589 9999999999
Q ss_pred hhhhhcCCeec
Q psy5169 83 LVYFWTPCTVK 93 (94)
Q Consensus 83 ll~fly~~~v~ 93 (94)
+|+|+|||++.
T Consensus 84 ll~~~Ytg~~~ 94 (127)
T 1r29_A 84 LLDFMYTSRLN 94 (127)
T ss_dssp HHHHHHHSCCC
T ss_pred HHHHHcCCCcC
Confidence 99999999874
No 4
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.94 E-value=3.7e-27 Score=147.16 Aligned_cols=91 Identities=15% Similarity=0.233 Sum_probs=79.5
Q ss_pred CeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCC--CCC-ccccCCCCHHH
Q psy5169 3 EQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQ--SEN-TNFLSSFAFKI 79 (94)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e--~~~-~~~l~~v~~~~ 79 (94)
+.+.+++++|+..+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.+++.+ +.. .+.++++++++
T Consensus 21 ~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~ 100 (144)
T 2ppi_A 21 QSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMV 100 (144)
T ss_dssp CCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHH
T ss_pred eeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHH
Confidence 566889999999999999999999999999999999999999999999999999999987765 333 44899999999
Q ss_pred HHHhhhhhcCCeec
Q psy5169 80 FECLVYFWTPCTVK 93 (94)
Q Consensus 80 ~~~ll~fly~~~v~ 93 (94)
|+.+|+|+|||++.
T Consensus 101 f~~lL~fiYtg~~~ 114 (144)
T 2ppi_A 101 MREILDYIFSGQIR 114 (144)
T ss_dssp HHHHHHHHTTSCCC
T ss_pred HHHHHHHHhCCCCC
Confidence 99999999999874
No 5
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.94 E-value=7.2e-27 Score=141.14 Aligned_cols=87 Identities=22% Similarity=0.227 Sum_probs=80.6
Q ss_pred CCeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHH
Q psy5169 2 PEQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFE 81 (94)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~ 81 (94)
++.+.+.+++|+..+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.++ ...+.++++++++|+
T Consensus 4 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~~~~f~ 79 (116)
T 3fkc_A 4 RKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIRAEIFA 79 (116)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHH
T ss_pred CceeeecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHH
Confidence 4567888999999999999999999999999999999999999999999999999999875 344588999999999
Q ss_pred HhhhhhcCCee
Q psy5169 82 CLVYFWTPCTV 92 (94)
Q Consensus 82 ~ll~fly~~~v 92 (94)
.+|+|+|||++
T Consensus 80 ~~l~~~Ytg~~ 90 (116)
T 3fkc_A 80 EILNYIYSSKI 90 (116)
T ss_dssp HHHHHHTTSCC
T ss_pred HHHHhhcCCCc
Confidence 99999999987
No 6
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.94 E-value=4.8e-27 Score=143.12 Aligned_cols=90 Identities=22% Similarity=0.308 Sum_probs=80.5
Q ss_pred CeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCcccc-CCCCHHHHH
Q psy5169 3 EQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFL-SSFAFKIFE 81 (94)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l-~~v~~~~~~ 81 (94)
+.+.++|+.|+..+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.+++.++ ..+.+ +++++++|+
T Consensus 3 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~-~~i~l~~~v~~~~f~ 81 (124)
T 2ihc_A 3 SVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE-LNITLPEEVTVKGFE 81 (124)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C-EEEECCTTSCHHHHH
T ss_pred ceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC-ceEeecCCcCHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999987664 34467 589999999
Q ss_pred HhhhhhcCCeec
Q psy5169 82 CLVYFWTPCTVK 93 (94)
Q Consensus 82 ~ll~fly~~~v~ 93 (94)
.+|+|+|||++.
T Consensus 82 ~lL~~iYtg~~~ 93 (124)
T 2ihc_A 82 PLIQFAYTAKLI 93 (124)
T ss_dssp HHHHHHHHSEEE
T ss_pred HHHHHhcCCCcc
Confidence 999999999874
No 7
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.94 E-value=1.5e-27 Score=144.44 Aligned_cols=85 Identities=20% Similarity=0.287 Sum_probs=78.0
Q ss_pred eeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHhhh
Q psy5169 6 SLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECLVY 85 (94)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~ll~ 85 (94)
+++|++|+..+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.+++ ...+.++++++++|+.+|+
T Consensus 1 s~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~~~~f~~ll~ 77 (119)
T 3b84_A 1 SMSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGFAEIFGLLLD 77 (119)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGGHHHHHHHHH
T ss_pred CcccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCCHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999999999999865 3456889999999999999
Q ss_pred hhcCCeec
Q psy5169 86 FWTPCTVK 93 (94)
Q Consensus 86 fly~~~v~ 93 (94)
|+|||++.
T Consensus 78 ~iYtg~~~ 85 (119)
T 3b84_A 78 FFYTGHLA 85 (119)
T ss_dssp HHHHSCCC
T ss_pred HHcCCCCc
Confidence 99999874
No 8
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.94 E-value=7e-27 Score=143.16 Aligned_cols=90 Identities=18% Similarity=0.245 Sum_probs=81.6
Q ss_pred CCCeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccC-CCCHHH
Q psy5169 1 MPEQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLS-SFAFKI 79 (94)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~-~v~~~~ 79 (94)
+.+.+.++|++|...+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.++ ....+.++ ++++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~~~~ 81 (129)
T 3ga1_A 5 SAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQPQS 81 (129)
T ss_dssp --CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCCHHH
T ss_pred CCceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCCHHH
Confidence 35788999999999999999999999999999999999999999999999999999999876 33445886 999999
Q ss_pred HHHhhhhhcCCeec
Q psy5169 80 FECLVYFWTPCTVK 93 (94)
Q Consensus 80 ~~~ll~fly~~~v~ 93 (94)
|+.+|+|+|||++.
T Consensus 82 f~~ll~~iYtg~~~ 95 (129)
T 3ga1_A 82 FQQILSFCYTGRLS 95 (129)
T ss_dssp HHHHHHHHHHSEEE
T ss_pred HHHHHHHHhCCccc
Confidence 99999999999875
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.93 E-value=1e-26 Score=143.94 Aligned_cols=90 Identities=23% Similarity=0.320 Sum_probs=82.1
Q ss_pred CeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCcccc-CCCCHHHHH
Q psy5169 3 EQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFL-SSFAFKIFE 81 (94)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l-~~v~~~~~~ 81 (94)
..+.++|+.|+..+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.+++.+. ..+.+ .++++++|+
T Consensus 10 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~-~~i~l~~~v~~~~~~ 88 (138)
T 2z8h_A 10 AVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE-LTVTLPEEVTVKGFE 88 (138)
T ss_dssp CCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT-EEEECCTTSCHHHHH
T ss_pred CeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC-ceEEeCCCCCHHHHH
Confidence 4578899999999999999999999999999999999999999999999999999999987663 34577 489999999
Q ss_pred HhhhhhcCCeec
Q psy5169 82 CLVYFWTPCTVK 93 (94)
Q Consensus 82 ~ll~fly~~~v~ 93 (94)
.+|+|+|||++.
T Consensus 89 ~lL~~~Ytg~~~ 100 (138)
T 2z8h_A 89 PLIQFAYTAKLI 100 (138)
T ss_dssp HHHHHHHHSCCC
T ss_pred HHHHHhcCCCcc
Confidence 999999999874
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.93 E-value=1.1e-26 Score=140.90 Aligned_cols=86 Identities=17% Similarity=0.195 Sum_probs=79.6
Q ss_pred eeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHh
Q psy5169 4 QYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECL 83 (94)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~l 83 (94)
.+.+++++|++.+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.++ ...+.++++++++|+.+
T Consensus 3 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~~~~f~~l 78 (121)
T 1buo_A 3 MIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLSPKTFQQI 78 (121)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHHHH
T ss_pred ceeccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCCHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999874 23458899999999999
Q ss_pred hhhhcCCeec
Q psy5169 84 VYFWTPCTVK 93 (94)
Q Consensus 84 l~fly~~~v~ 93 (94)
|+|+|||++.
T Consensus 79 l~~~Ytg~~~ 88 (121)
T 1buo_A 79 LEYAYTATLQ 88 (121)
T ss_dssp HHHHHHSCCC
T ss_pred HHhhcCCCcC
Confidence 9999999874
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.93 E-value=4.8e-26 Score=140.59 Aligned_cols=83 Identities=19% Similarity=0.268 Sum_probs=72.4
Q ss_pred eeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHhhhhh
Q psy5169 8 KWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECLVYFW 87 (94)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~ll~fl 87 (94)
.+.+|...+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.+++ ...+.++++++++|+.+|+|+
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~~~~f~~lL~fi 80 (135)
T 2yy9_A 4 GSSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGFAEIFGLLLDFF 80 (135)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGGHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCCHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999876 344688999999999999999
Q ss_pred cCCeec
Q psy5169 88 TPCTVK 93 (94)
Q Consensus 88 y~~~v~ 93 (94)
|||++.
T Consensus 81 Ytg~~~ 86 (135)
T 2yy9_A 81 YTGHLA 86 (135)
T ss_dssp HHSCCC
T ss_pred hCCCCC
Confidence 999874
No 12
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.92 E-value=1.1e-25 Score=150.83 Aligned_cols=93 Identities=17% Similarity=0.231 Sum_probs=72.1
Q ss_pred CCCeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCC--CCCCc-cccCCCCH
Q psy5169 1 MPEQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLG--QSENT-NFLSSFAF 77 (94)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~--e~~~~-~~l~~v~~ 77 (94)
|+....+.+++|+..+++.+++++.++.+|||+|.+||+.|+|||+|||++|+||++||.+++. ++... +.++++++
T Consensus 3 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~ 82 (256)
T 3hve_A 3 MAEGSAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISV 82 (256)
T ss_dssp -------CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCH
T ss_pred CCCCCccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCH
Confidence 6778889999999999999999999999999999999999999999999999999999998876 34433 49999999
Q ss_pred HHHHHhhhhhcCCeec
Q psy5169 78 KIFECLVYFWTPCTVK 93 (94)
Q Consensus 78 ~~~~~ll~fly~~~v~ 93 (94)
++|+.+|+|+|||++.
T Consensus 83 ~~f~~ll~~~Yt~~~~ 98 (256)
T 3hve_A 83 MVMREILDYIFSGQIR 98 (256)
T ss_dssp HHHHHHHHHHHHSCCC
T ss_pred HHHHHHHhhccCCCCc
Confidence 9999999999999874
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.92 E-value=6.8e-26 Score=136.34 Aligned_cols=82 Identities=23% Similarity=0.246 Sum_probs=73.7
Q ss_pred eCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccC--CCCHHHHHHhhhh
Q psy5169 9 WNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLS--SFAFKIFECLVYF 86 (94)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~--~v~~~~~~~ll~f 86 (94)
.++|+..+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.++ +...+.++ ++++++|+.+|+|
T Consensus 2 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~~~~f~~ll~~ 78 (116)
T 2vpk_A 2 MSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVKADGFQKLLEF 78 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCCHHHHHHHHHH
Confidence 346889999999999999999999999999999999999999999999999886 23344566 9999999999999
Q ss_pred hcCCeec
Q psy5169 87 WTPCTVK 93 (94)
Q Consensus 87 ly~~~v~ 93 (94)
+|||++.
T Consensus 79 ~Yt~~~~ 85 (116)
T 2vpk_A 79 IYTGTLN 85 (116)
T ss_dssp HHHSCCC
T ss_pred HcCCCcc
Confidence 9999874
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.92 E-value=5.2e-26 Score=137.64 Aligned_cols=85 Identities=16% Similarity=0.219 Sum_probs=76.1
Q ss_pred eeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHhh
Q psy5169 5 YSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECLV 84 (94)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~ll 84 (94)
..+++++|...+++.+++++.++.+|||+|.++|+.|+|||+|||++|+||++||.++ ...+.++++++++|+.+|
T Consensus 3 ~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~~~~f~~ll 78 (119)
T 2q81_A 3 LGSDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISNAAGLGQVL 78 (119)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCCHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHHHHH
Confidence 3566788999999999999999999999999999999999999999999999999862 234588899999999999
Q ss_pred hhhcCCeec
Q psy5169 85 YFWTPCTVK 93 (94)
Q Consensus 85 ~fly~~~v~ 93 (94)
+|+|||++.
T Consensus 79 ~~~Ytg~~~ 87 (119)
T 2q81_A 79 EFMYTAKLS 87 (119)
T ss_dssp HHHHHSCCC
T ss_pred HHHcCCCCc
Confidence 999999874
No 15
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.91 E-value=8.9e-25 Score=148.12 Aligned_cols=91 Identities=13% Similarity=0.227 Sum_probs=77.4
Q ss_pred CeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEEC---CeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCcc-ccC-----
Q psy5169 3 EQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVE---GKIIQAHKVILSVCSPYFIKCPPKKLGQSENTN-FLS----- 73 (94)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~---~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~-~l~----- 73 (94)
+...+.+++|+..+++.+++++.++.+|||+|.+| |+.|+|||+|||++|+||++||.+++.|+.... .++
T Consensus 6 ~~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~ 85 (279)
T 3i3n_A 6 EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSE 85 (279)
T ss_dssp CEEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSST
T ss_pred cccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEecccccc
Confidence 45778999999999999999999999999999998 999999999999999999999999988877655 787
Q ss_pred -CCCHHHHHHhhhhhcCCeec
Q psy5169 74 -SFAFKIFECLVYFWTPCTVK 93 (94)
Q Consensus 74 -~v~~~~~~~ll~fly~~~v~ 93 (94)
++++++|+.+|+|+|||++.
T Consensus 86 ~~v~~~~f~~ll~~~Ytg~~~ 106 (279)
T 3i3n_A 86 PGPEPDTVEAVIEYMYTGRIR 106 (279)
T ss_dssp TCSCHHHHHHHHHHHHHSEEE
T ss_pred CCCCHHHHHHHHHhhCcCCcc
Confidence 89999999999999999874
No 16
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.89 E-value=3.6e-24 Score=127.22 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=60.9
Q ss_pred hhhhCCCceeEEEEECC----eEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHhhhhhcCCeec
Q psy5169 22 GLFEDEDLVDVSLAVEG----KIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECLVYFWTPCTVK 93 (94)
Q Consensus 22 ~~~~~~~~~Dv~l~~~~----~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~ll~fly~~~v~ 93 (94)
+++.++.+|||+|.++| +.|+|||.|||++|+||++||.+++.|+...+.++++++++|+.+|+|+|||++.
T Consensus 1 ~l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~ 76 (109)
T 2vkp_A 1 SMFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDEID 76 (109)
T ss_dssp CCTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------CCEEEETTSCHHHHHHHHHHHHHCCCC
T ss_pred CcccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCCCeEEeCCCCHHHHHHHHHHHcCCCcc
Confidence 36889999999999988 8999999999999999999999999888744599999999999999999999874
No 17
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.89 E-value=4.9e-24 Score=135.05 Aligned_cols=85 Identities=24% Similarity=0.354 Sum_probs=77.4
Q ss_pred eCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCcc-ccCCCCHHHHHHhhhhh
Q psy5169 9 WNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTN-FLSSFAFKIFECLVYFW 87 (94)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~-~l~~v~~~~~~~ll~fl 87 (94)
+...++.+...+++++.++.+|||+|.++|+.|+|||.||+++|+||++||.+++.++.... .++++++++|+.+|+|+
T Consensus 14 ~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~ 93 (172)
T 3htm_A 14 VKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFI 93 (172)
T ss_dssp SCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHH
Confidence 34456678999999999999999999999999999999999999999999999888876655 99999999999999999
Q ss_pred cCCeec
Q psy5169 88 TPCTVK 93 (94)
Q Consensus 88 y~~~v~ 93 (94)
||+.+.
T Consensus 94 Yt~~~~ 99 (172)
T 3htm_A 94 YTGKAP 99 (172)
T ss_dssp HHSCCT
T ss_pred hCCCCC
Confidence 999864
No 18
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.88 E-value=3.1e-24 Score=132.72 Aligned_cols=82 Identities=24% Similarity=0.383 Sum_probs=74.5
Q ss_pred chHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCcc-ccCCCCHHHHHHhhhhhcCC
Q psy5169 12 FHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTN-FLSSFAFKIFECLVYFWTPC 90 (94)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~-~l~~v~~~~~~~ll~fly~~ 90 (94)
.++.+.+.+++++.++.+|||+|.++|+.|+|||.||+++|+||++||.+++.++.... .++++++++|+.+|+|+|||
T Consensus 8 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 8 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 87 (145)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccC
Confidence 34578899999999999999999999999999999999999999999999877665444 89999999999999999999
Q ss_pred eec
Q psy5169 91 TVK 93 (94)
Q Consensus 91 ~v~ 93 (94)
++.
T Consensus 88 ~~~ 90 (145)
T 4eoz_A 88 KAP 90 (145)
T ss_dssp CCT
T ss_pred ccC
Confidence 874
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.87 E-value=1.4e-22 Score=122.90 Aligned_cols=79 Identities=16% Similarity=0.062 Sum_probs=67.5
Q ss_pred eeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHhh
Q psy5169 5 YSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECLV 84 (94)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~ll 84 (94)
.....+.+...+++.++ |.++.+|||+|.++|+.|+|||+|||++|+||++ ....+.++++++++|+.+|
T Consensus 8 ~~~~~~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~~~~f~~ll 77 (119)
T 3m5b_A 8 IRLPSPYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGISPSTFAQLL 77 (119)
T ss_dssp EEECCTTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCCHHHHHHHH
T ss_pred CCCCCCcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCCHHHHHHHH
Confidence 34455567778888886 7789999999999999999999999999999985 1234589999999999999
Q ss_pred hhhcCCeec
Q psy5169 85 YFWTPCTVK 93 (94)
Q Consensus 85 ~fly~~~v~ 93 (94)
+|+|||++.
T Consensus 78 ~fiYtg~~~ 86 (119)
T 3m5b_A 78 NFVYGESVE 86 (119)
T ss_dssp HHHTTCCEE
T ss_pred HHHcCCCcC
Confidence 999999874
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.85 E-value=8.2e-22 Score=135.11 Aligned_cols=81 Identities=25% Similarity=0.404 Sum_probs=70.6
Q ss_pred hHHHHHHHHhhhhCCCceeEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCcc-ccCCCCHHHHHHhhhhhcCCe
Q psy5169 13 HANLTTGFHGLFEDEDLVDVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTN-FLSSFAFKIFECLVYFWTPCT 91 (94)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~-~l~~v~~~~~~~ll~fly~~~ 91 (94)
++.+.+.+.+++.++.+|||+|.++|++|+|||+|||++|+||++||.+++.|+.... .++++++++|+.+|+|+||++
T Consensus 158 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~ 237 (312)
T 3hqi_A 158 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGK 237 (312)
T ss_dssp CCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred CchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCC
Confidence 3468899999999999999999999999999999999999999999999988877665 999999999999999999997
Q ss_pred ec
Q psy5169 92 VK 93 (94)
Q Consensus 92 v~ 93 (94)
+.
T Consensus 238 ~~ 239 (312)
T 3hqi_A 238 AP 239 (312)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.26 E-value=6.6e-12 Score=73.35 Aligned_cols=56 Identities=11% Similarity=0.176 Sum_probs=44.3
Q ss_pred EEEEE-CCeEEEhhHHHHhhcCHHHHhcCCC--CCCCCCCc-cccCCCCHHHHHHhhhhhc
Q psy5169 32 VSLAV-EGKIIQAHKVILSVCSPYFIKCPPK--KLGQSENT-NFLSSFAFKIFECLVYFWT 88 (94)
Q Consensus 32 v~l~~-~~~~~~~Hk~vLa~~S~yF~~~f~~--~~~e~~~~-~~l~~v~~~~~~~ll~fly 88 (94)
|+|+. +|++|++||.+ |++|+||++||.+ ++.|+... ++|++|++.+++.+++|+|
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~ 63 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 63 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHH
Confidence 56665 88999999999 9999999999987 45554444 4999999999999999999
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.09 E-value=9.9e-11 Score=73.77 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=48.1
Q ss_pred EEEEE-CCeEEEhhHHHHhhcCHHHHhcCCC-CCC-CCCC-ccccCCCCHHHHHHhhhhhcCCe
Q psy5169 32 VSLAV-EGKIIQAHKVILSVCSPYFIKCPPK-KLG-QSEN-TNFLSSFAFKIFECLVYFWTPCT 91 (94)
Q Consensus 32 v~l~~-~~~~~~~Hk~vLa~~S~yF~~~f~~-~~~-e~~~-~~~l~~v~~~~~~~ll~fly~~~ 91 (94)
|+|+. +|+.|++||.+ |++|+||++||.+ +.. |+.. .++|++|++.+|+.+++|+|+..
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~ 65 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 65 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcC
Confidence 67765 89999999999 8999999999987 544 3333 45999999999999999998764
No 23
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.59 E-value=8.3e-08 Score=56.07 Aligned_cols=57 Identities=19% Similarity=0.189 Sum_probs=47.2
Q ss_pred EEEEE-CCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHhhhhhcC
Q psy5169 32 VSLAV-EGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECLVYFWTP 89 (94)
Q Consensus 32 v~l~~-~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~ll~fly~ 89 (94)
|+|+. +|+.|.+++.+ |.+|.++++|+..+.......++|++|+..+++.+++|++.
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~ 63 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNY 63 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHH
Confidence 67766 89999999997 88999999999875522224459999999999999999863
No 24
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.51 E-value=7.7e-08 Score=59.43 Aligned_cols=55 Identities=15% Similarity=0.099 Sum_probs=46.7
Q ss_pred EEEEE-CCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHhhhhhcCC
Q psy5169 32 VSLAV-EGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECLVYFWTPC 90 (94)
Q Consensus 32 v~l~~-~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~ll~fly~~ 90 (94)
|+|+. +|+.|.+|+.+ |.+|.++++|+.... ...+++++|+..+++.+++|+|..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~~~iL~kVieyc~~h 59 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVNAAILKKVIQWCTHH 59 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcCHHHHHHHHHHHHHh
Confidence 67776 88999999998 889999999997632 345699999999999999999753
No 25
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.43 E-value=2.1e-07 Score=54.07 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=44.5
Q ss_pred EEEEE-CCeEEEhhHHHHhhcCHHHHhcCCCC--CCCCC-CccccCCCCHHHHHHhhhhhcC
Q psy5169 32 VSLAV-EGKIIQAHKVILSVCSPYFIKCPPKK--LGQSE-NTNFLSSFAFKIFECLVYFWTP 89 (94)
Q Consensus 32 v~l~~-~~~~~~~Hk~vLa~~S~yF~~~f~~~--~~e~~-~~~~l~~v~~~~~~~ll~fly~ 89 (94)
|+++. +|..|.+++.+ |..|.++++|+... ..|+. ..++|++|+..+++.+++|++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~ 63 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTY 63 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHH
Confidence 56665 89999999997 88999999999752 23333 3459999999999999999863
No 26
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.38 E-value=5.7e-08 Score=61.19 Aligned_cols=57 Identities=12% Similarity=0.179 Sum_probs=28.0
Q ss_pred EEEEE-CCeEEEhhHHHHhhcCHHHHhcCCCCCCCCCCccccCCCCHHHHHHhhhhhcCCe
Q psy5169 32 VSLAV-EGKIIQAHKVILSVCSPYFIKCPPKKLGQSENTNFLSSFAFKIFECLVYFWTPCT 91 (94)
Q Consensus 32 v~l~~-~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e~~~~~~l~~v~~~~~~~ll~fly~~~ 91 (94)
|+|+. +|+.|.+|+.+ |.+|+++++||.... ....++|++|+..+|+.+++|+|...
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~~~iL~kVieyc~~h~ 63 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVTSKILAKVIEYCKRHV 63 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSCHHHHHHHHHC-----
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCcHHHHHHHHHHHHHcc
Confidence 56664 89999999998 889999999998643 23356999999999999999998754
No 27
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.93 E-value=1.8e-05 Score=47.03 Aligned_cols=57 Identities=12% Similarity=0.160 Sum_probs=43.9
Q ss_pred eEEEEE-CCeEEEhhHHHHhhcCHHHHhcCCCC--CCCCC-CccccCCCCHHHHHHhhhhhc
Q psy5169 31 DVSLAV-EGKIIQAHKVILSVCSPYFIKCPPKK--LGQSE-NTNFLSSFAFKIFECLVYFWT 88 (94)
Q Consensus 31 Dv~l~~-~~~~~~~Hk~vLa~~S~yF~~~f~~~--~~e~~-~~~~l~~v~~~~~~~ll~fly 88 (94)
-|+|+. +|..|.+.+.+ |..|..++.|+... +.+.. ..++|++|+..+|+.+++|++
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~ 78 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHH
Confidence 366764 88999999995 77899999999853 22332 345999999999999999985
No 28
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.70 E-value=3.9e-05 Score=48.58 Aligned_cols=57 Identities=14% Similarity=0.088 Sum_probs=43.9
Q ss_pred eEEEEE-CCeEEEhhHHHHhhcCHHHHhcCCCCCCC----C-CCccccCCCCHHHHHHhhhhhc
Q psy5169 31 DVSLAV-EGKIIQAHKVILSVCSPYFIKCPPKKLGQ----S-ENTNFLSSFAFKIFECLVYFWT 88 (94)
Q Consensus 31 Dv~l~~-~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e----~-~~~~~l~~v~~~~~~~ll~fly 88 (94)
-|+|+. +|..|.+++.+ |..|..++.|+.....+ . ...++|++|+..+|+.+++|++
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~ 70 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAE 70 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHH
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHH
Confidence 466765 88999999998 77899999999753321 1 1445899999999999999974
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.41 E-value=0.00016 Score=42.45 Aligned_cols=62 Identities=13% Similarity=0.157 Sum_probs=46.7
Q ss_pred EEEEECCeEEEhhHHHHhhcC-HHHHhcCCCCCC----CCCCccccCCCCHHHHHHhhhhhcCCeec
Q psy5169 32 VSLAVEGKIIQAHKVILSVCS-PYFIKCPPKKLG----QSENTNFLSSFAFKIFECLVYFWTPCTVK 93 (94)
Q Consensus 32 v~l~~~~~~~~~Hk~vLa~~S-~yF~~~f~~~~~----e~~~~~~l~~v~~~~~~~ll~fly~~~v~ 93 (94)
|.|.|||+.|...+..|+... .+|.+||.+... ........-|-+|..|+.+|+|+.+|.+.
T Consensus 8 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~l~ 74 (107)
T 3drz_A 8 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLV 74 (107)
T ss_dssp EEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEecCChHHHHHHHHHhCCCeeC
Confidence 677899999999999999875 478888876421 11122233368999999999999988763
No 30
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.63 E-value=0.0064 Score=36.06 Aligned_cols=62 Identities=11% Similarity=0.154 Sum_probs=43.8
Q ss_pred EEEEECCeEEEhhHHHHhhcCH-HHHhcCCCCCC-CCCCccccCCCCHHHHHHhhhhhcCCeec
Q psy5169 32 VSLAVEGKIIQAHKVILSVCSP-YFIKCPPKKLG-QSENTNFLSSFAFKIFECLVYFWTPCTVK 93 (94)
Q Consensus 32 v~l~~~~~~~~~Hk~vLa~~S~-yF~~~f~~~~~-e~~~~~~l~~v~~~~~~~ll~fly~~~v~ 93 (94)
|+|.|||..|...+..|+.... .+.+|+..... ........-|-++..|+.+|+|+-+|++.
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiDRdp~~F~~ILnylR~G~l~ 70 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGKLH 70 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEECSCTTTHHHHHHHHHHSCBC
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEecChHHHHHHHHHhcCCCCC
Confidence 6788999999999999987643 45666654321 11122233358999999999999888763
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=93.54 E-value=0.025 Score=36.73 Aligned_cols=67 Identities=12% Similarity=0.151 Sum_probs=46.9
Q ss_pred CCcee-EEEEECCeEEEhhHHHHhhcC-HHHHhcCCCCCC----CCCCccccCCCCHHHHHHhhhhhcCCeec
Q psy5169 27 EDLVD-VSLAVEGKIIQAHKVILSVCS-PYFIKCPPKKLG----QSENTNFLSSFAFKIFECLVYFWTPCTVK 93 (94)
Q Consensus 27 ~~~~D-v~l~~~~~~~~~Hk~vLa~~S-~yF~~~f~~~~~----e~~~~~~l~~v~~~~~~~ll~fly~~~v~ 93 (94)
|...+ |.|.|||..|...+..|+... .+|.+||.+... ........-|-+|..|+.+|+|+-+|.+.
T Consensus 8 g~~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~L~ 80 (202)
T 3drx_A 8 GSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLV 80 (202)
T ss_dssp SCCCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEECSCSTTHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEecCChHHHHHHHHHhcCCccC
Confidence 33444 566799999999999998764 377888875421 11122233368999999999999888763
No 32
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=92.12 E-value=0.14 Score=30.52 Aligned_cols=60 Identities=13% Similarity=0.261 Sum_probs=40.4
Q ss_pred eEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCC----CCCCccccCCCCHHHHHHhhhhhcCCeec
Q psy5169 31 DVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLG----QSENTNFLSSFAFKIFECLVYFWTPCTVK 93 (94)
Q Consensus 31 Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~----e~~~~~~l~~v~~~~~~~ll~fly~~~v~ 93 (94)
=|.|.|||..|..-+..|+..- ..+|..... ........-|=++..|+.+|+|+-+|.+.
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~ 77 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLH 77 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSCBC
T ss_pred EEEEEeCCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhcCCCC
Confidence 3677899999999999998643 234433110 11122233357999999999999888763
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=89.99 E-value=0.057 Score=31.12 Aligned_cols=62 Identities=11% Similarity=0.201 Sum_probs=38.7
Q ss_pred EEEEECCeEEEhhHHHHhhcCH-HHHhcCCCCC-CCCCCccccCCCCHHHHHHhhhhhcC-Ceec
Q psy5169 32 VSLAVEGKIIQAHKVILSVCSP-YFIKCPPKKL-GQSENTNFLSSFAFKIFECLVYFWTP-CTVK 93 (94)
Q Consensus 32 v~l~~~~~~~~~Hk~vLa~~S~-yF~~~f~~~~-~e~~~~~~l~~v~~~~~~~ll~fly~-~~v~ 93 (94)
|+|.|||..|...+..|+..-. .+.+|+.... .........=|=++..|+.+|+|+-+ |++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDRdp~~F~~ILnflR~~G~l~ 67 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLR 67 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECSCSTTHHHHHHHHHTTSCCC
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcCChHHHHHHHHHHhcCCccc
Confidence 6788999999999999975421 1222221100 00112222336799999999999987 7653
No 34
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=89.93 E-value=0.22 Score=30.37 Aligned_cols=60 Identities=13% Similarity=0.261 Sum_probs=40.6
Q ss_pred eEEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCC----CCCCccccCCCCHHHHHHhhhhhcCCeec
Q psy5169 31 DVSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLG----QSENTNFLSSFAFKIFECLVYFWTPCTVK 93 (94)
Q Consensus 31 Dv~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~----e~~~~~~l~~v~~~~~~~ll~fly~~~v~ 93 (94)
=|+|.|||..|...+..|...- ..+|..... ........-|=++..|+.+|+|+-+|.+.
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~l~ 99 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLH 99 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEECSCHHHHHHHHHHHHHSSBC
T ss_pred EEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEEeCCcHHHHHHHHHHhcCCcC
Confidence 4677899999999999998643 334443111 01122233357999999999999888763
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=88.47 E-value=0.091 Score=30.43 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=39.9
Q ss_pred EEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCCC----CCCccccCCCCHHHHHHhhhhhcCCeec
Q psy5169 32 VSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLGQ----SENTNFLSSFAFKIFECLVYFWTPCTVK 93 (94)
Q Consensus 32 v~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~e----~~~~~~l~~v~~~~~~~ll~fly~~~v~ 93 (94)
|.|.|||..|...+..|+.... .+|...... .......-|=++..|+.+|+|+-+|.+.
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~ 64 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLH 64 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBC
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEeCCcHHHHHHHHHHhcCCCC
Confidence 6788999999999999986432 344431110 0112222357999999999999888753
No 36
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=58.47 E-value=3.1 Score=30.24 Aligned_cols=59 Identities=8% Similarity=0.163 Sum_probs=38.8
Q ss_pred EEEEECCeEEEhhHHHHhhcCHHHHhcCCCCCC-----CCCCccccCCCCHHHHHHhhhhhcC-Ceec
Q psy5169 32 VSLAVEGKIIQAHKVILSVCSPYFIKCPPKKLG-----QSENTNFLSSFAFKIFECLVYFWTP-CTVK 93 (94)
Q Consensus 32 v~l~~~~~~~~~Hk~vLa~~S~yF~~~f~~~~~-----e~~~~~~l~~v~~~~~~~ll~fly~-~~v~ 93 (94)
|.|-|||..|...+..|+.. -..++..... ........=|=++..|+.+|+|+-+ |++.
T Consensus 54 v~lNVgG~~f~t~~~tL~~~---p~s~l~~~~~~~~~~~~~~~~~f~DR~~~~F~~IL~~~r~~g~l~ 118 (514)
T 2r9r_B 54 VVINISGLRFETQLKTLAQF---PETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLR 118 (514)
T ss_dssp EEEEETTEEEEEEHHHHTTS---TTSTTTCHHHHGGGEETTTTEEEECSCHHHHHHHHHHHHHTSCCC
T ss_pred EEEEeCCEEEEecHHHHhcC---CCCcccccccCCcccCCCCCCEEEcCChHHHHHHHHHHhcCCccc
Confidence 66679999999999999753 2333332110 1112233336899999999999987 7653
No 37
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=36.07 E-value=30 Score=21.43 Aligned_cols=24 Identities=13% Similarity=0.234 Sum_probs=18.5
Q ss_pred hHHHHHHHHhhhhCCCceeEEEEECC
Q psy5169 13 HANLTTGFHGLFEDEDLVDVSLAVEG 38 (94)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~Dv~l~~~~ 38 (94)
+..+.+.+.++..+| +|++|++||
T Consensus 80 S~~fA~~l~~~~~~G--~~i~FvIGG 103 (163)
T 1o6d_A 80 SEEFADFLKDLEMKG--KDITILIGG 103 (163)
T ss_dssp HHHHHHHHHHHHHHT--CCEEEEECC
T ss_pred HHHHHHHHHHHHhcC--CeEEEEEEC
Confidence 345557778888888 699999988
No 38
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=33.90 E-value=29 Score=21.21 Aligned_cols=24 Identities=29% Similarity=0.329 Sum_probs=18.3
Q ss_pred hHHHHHHHHhhhhCCCceeEEEEECC
Q psy5169 13 HANLTTGFHGLFEDEDLVDVSLAVEG 38 (94)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~Dv~l~~~~ 38 (94)
+..+.+.+.++..+| +|++|++||
T Consensus 81 S~~fA~~l~~~~~~g--~~i~FvIGG 104 (155)
T 1ns5_A 81 TPQLAAELERWKLDG--RDVSLLIGG 104 (155)
T ss_dssp HHHHHHHHHHHHHHC--SCEEEEECB
T ss_pred HHHHHHHHHHHHhcC--CeEEEEEEC
Confidence 345556777777788 699999988
No 39
>1taf_A TFIID TBP associated factor 42; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=29.95 E-value=23 Score=18.67 Aligned_cols=16 Identities=13% Similarity=0.221 Sum_probs=13.6
Q ss_pred CCCCHHHHHHhhhhhc
Q psy5169 73 SSFAFKIFECLVYFWT 88 (94)
Q Consensus 73 ~~v~~~~~~~ll~fly 88 (94)
+.+++.+...|++|+|
T Consensus 17 ~~~~~~v~~~L~e~~~ 32 (68)
T 1taf_A 17 QEYEPRVVNQLLEFTF 32 (68)
T ss_dssp CCBCTHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHH
Confidence 4688999999999985
No 40
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=27.20 E-value=85 Score=18.88 Aligned_cols=29 Identities=3% Similarity=0.015 Sum_probs=21.5
Q ss_pred eCCchHHHHHHHHhhhhCCCceeEEEEECCe
Q psy5169 9 WNNFHANLTTGFHGLFEDEDLVDVSLAVEGK 39 (94)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~ 39 (94)
..+....+.+.+.++..++ +|++|..||-
T Consensus 51 v~Dd~~~I~~~l~~a~~~~--~DlVittGG~ 79 (167)
T 2g2c_A 51 VPEGYDTVVEAIATALKQG--ARFIITAGGT 79 (167)
T ss_dssp ECSSHHHHHHHHHHHHHTT--CSEEEEESCC
T ss_pred eCCCHHHHHHHHHHHHhCC--CCEEEECCCC
Confidence 3455677888888877644 8999999873
No 41
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=26.44 E-value=27 Score=19.36 Aligned_cols=24 Identities=13% Similarity=-0.081 Sum_probs=19.7
Q ss_pred Ccc-ccCCCCHHHHHHhhhhhcCCe
Q psy5169 68 NTN-FLSSFAFKIFECLVYFWTPCT 91 (94)
Q Consensus 68 ~~~-~l~~v~~~~~~~ll~fly~~~ 91 (94)
..+ .+.+++.+.-+.+++|+-|..
T Consensus 30 ~VvvNL~~ld~~~AqRivDF~sG~~ 54 (87)
T 3p04_A 30 AVVFDMSLLSREEARRIVDFAAGLC 54 (87)
T ss_dssp CEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHhccce
Confidence 444 888999999999999987643
No 42
>2l9d_A Uncharacterized protein; PG9854E, structural genomics, PSI-biology, protein structure initiative, unknown function; NMR {Methylobacillus flagellatus}
Probab=24.93 E-value=4.5 Score=23.55 Aligned_cols=37 Identities=22% Similarity=0.150 Sum_probs=23.2
Q ss_pred cCHHHHhcCCCCCCCCCCcc-ccCCCCHHHHHHhhhhhc
Q psy5169 51 CSPYFIKCPPKKLGQSENTN-FLSSFAFKIFECLVYFWT 88 (94)
Q Consensus 51 ~S~yF~~~f~~~~~e~~~~~-~l~~v~~~~~~~ll~fly 88 (94)
.|+|-+-+..++.+ .--.. .|..++|.+++-+++|.-
T Consensus 49 YSp~~~P~~i~Gvk-cVvVd~~L~~~~P~af~fvm~FA~ 86 (108)
T 2l9d_A 49 YSPYLKPRVIEGVR-CLAVDLKLKDTNPEGFNQLMHFAT 86 (108)
T ss_dssp CCTTEEECCBTTBC-CEEEETHHHHHCHHHHHHHHHHHH
T ss_pred eCCcccceeeCCee-EEEECcHhhhcChHHHHHHHHHHH
Confidence 46666655543322 11111 677899999999999863
No 43
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=24.79 E-value=98 Score=19.07 Aligned_cols=25 Identities=16% Similarity=0.247 Sum_probs=17.5
Q ss_pred hHHHHHHHHhhhhCCCceeEEEEECC
Q psy5169 13 HANLTTGFHGLFEDEDLVDVSLAVEG 38 (94)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~Dv~l~~~~ 38 (94)
+..+.+.+.++..+|. +|++|++||
T Consensus 85 S~~fA~~l~~~~~~G~-~~i~FvIGG 109 (167)
T 1to0_A 85 SEELADTIDKLATYGK-SKVTFVIGG 109 (167)
T ss_dssp HHHHHHHHHHHHTTTC-CEEEEEECC
T ss_pred HHHHHHHHHHHHhcCC-ceEEEEEEC
Confidence 3445566777776664 399999988
No 44
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=23.23 E-value=1.1e+02 Score=17.34 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=33.2
Q ss_pred CCeeeeeeCCchHHHHHHHHhhhhCCCceeEEEEECCeE
Q psy5169 2 PEQYSLKWNNFHANLTTGFHGLFEDEDLVDVSLAVEGKI 40 (94)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~Dv~l~~~~~~ 40 (94)
++.|++.+.+-+..+...+.++-....|-.+.|..+++.
T Consensus 24 nqgyqvrdvndsdelkkemkklaeeknfekiliisndkq 62 (134)
T 2lci_A 24 NQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIISNDKQ 62 (134)
T ss_dssp TTTCEEEEECSHHHHHHHHHHHHHCCSCCCEEEEESCHH
T ss_pred ccCeeeeecCchHHHHHHHHHHHhhcCcceEEEEcCcHH
Confidence 456788888888899999999999999999999888864
No 45
>3gva_A Alkyltransferase-like protein 1; alkylated DNA damage repair, DNA damage, DNA repair, DNA- binding, DNA binding protein; 2.00A {Schizosaccharomyces pombe} PDB: 3gx4_X* 3gyh_X* 4enj_A* 4enk_A* 4enm_A* 4enn_A* 4hdu_A* 4hdv_A*
Probab=22.20 E-value=11 Score=22.01 Aligned_cols=12 Identities=33% Similarity=0.235 Sum_probs=9.8
Q ss_pred EEEhhHHHHhhc
Q psy5169 40 IIQAHKVILSVC 51 (94)
Q Consensus 40 ~~~~Hk~vLa~~ 51 (94)
.+||||+|=+..
T Consensus 53 ~IPCHRVV~s~G 64 (116)
T 3gva_A 53 HVPWHRVINSRG 64 (116)
T ss_dssp SSCGGGBCCTTS
T ss_pred CCCceEEECCCC
Confidence 489999997765
No 46
>1k8k_G P16, ARP2/3 complex 16 kDa subunit, P16-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: a.118.13.1 PDB: 1tyq_G* 1u2v_G* 2p9i_G* 2p9k_G* 2p9l_G 2p9n_G* 2p9p_G* 2p9s_G* 2p9u_G* 3rse_G 3dxm_G* 3dxk_G
Probab=22.13 E-value=28 Score=21.36 Aligned_cols=20 Identities=10% Similarity=0.006 Sum_probs=17.2
Q ss_pred ccCCCCHHHHHHhhhhhcCC
Q psy5169 71 FLSSFAFKIFECLVYFWTPC 90 (94)
Q Consensus 71 ~l~~v~~~~~~~ll~fly~~ 90 (94)
.+..++.+....|+.|||.|
T Consensus 94 ~v~~L~~e~~D~LMKYiYkG 113 (151)
T 1k8k_G 94 AVQSLDKNGVDLLMKYIYKG 113 (151)
T ss_dssp HHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHhChhhhhHHHHHHHHh
Confidence 56678899999999999965
No 47
>1wrj_A Methylated-DNA--protein-cysteine methyltransferase; 2.00A {Sulfolobus tokodaii}
Probab=20.79 E-value=12 Score=23.00 Aligned_cols=12 Identities=42% Similarity=0.517 Sum_probs=9.3
Q ss_pred EEEhhHHHHhhc
Q psy5169 40 IIQAHKVILSVC 51 (94)
Q Consensus 40 ~~~~Hk~vLa~~ 51 (94)
.+||||+|=+..
T Consensus 117 ~iPcHRVv~~~G 128 (156)
T 1wrj_A 117 IIPCHRVIGEKS 128 (156)
T ss_dssp TSCGGGEECSSS
T ss_pred ccCCCeEECCCC
Confidence 479999987654
No 48
>3l00_A SNAP-TAG; protein TAG, protein engineering, benzylguanine, benzylated transferase; HET: BCS; 1.70A {Homo sapiens} PDB: 3kzy_A* 3kzz_A* 1yfh_A* 1t39_A* 1qnt_A 1t38_A*
Probab=20.77 E-value=14 Score=23.38 Aligned_cols=13 Identities=23% Similarity=0.442 Sum_probs=10.2
Q ss_pred EEEhhHHHHhhcC
Q psy5169 40 IIQAHKVILSVCS 52 (94)
Q Consensus 40 ~~~~Hk~vLa~~S 52 (94)
.+||||+|=+..+
T Consensus 145 ~iPCHRVv~~~G~ 157 (182)
T 3l00_A 145 LIPCHRVVQGDLD 157 (182)
T ss_dssp TBCGGGEESBTTB
T ss_pred eeCceEEECCCCC
Confidence 4899999977653
Done!