BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5171
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6
Length = 2803
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 1 MEQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQT 60
++Q ++EQ +EQ + +EQ + ++E +E+ ++EQ E+ ++EQ
Sbjct: 1401 VKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQK 1460
Query: 61 KSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQT---KSSMEQTK 117
+++EQ ++E + +EQ +EQ + E+ +++Q S+E + E
Sbjct: 1461 DTALEQKDKALEPKDKDLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKD 1520
Query: 118 RFMEQTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQ 164
R +EQT EQ + EQ E+ +EQ ++ Q ++EQ
Sbjct: 1521 RDLEQTDKAPEQKHQAQEQKDKVSEKKDQALEQKYWALGQKDEALEQ 1567
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 17/187 (9%)
Query: 1 MEQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQT 60
+EQ +EQ +++EQ +E + +E+ ++EQ E+ +EQ ++EQ
Sbjct: 1408 LEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQK 1467
Query: 61 KSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNS-----------------MEQTK 103
++E +EQ R +EQ + E+ ++Q S +EQT
Sbjct: 1468 DKALEPKDKDLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTD 1527
Query: 104 SSMEQTKSSMEQTKRFMEQTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSME 163
+ EQ + EQ + E+ +EQ ++ Q ++EQ +E+ + EQ E
Sbjct: 1528 KAPEQKHQAQEQKDKVSEKKDQALEQKYWALGQKDEALEQNIQALEENHQTQEQESLVQE 1587
Query: 164 QTKLQAK 170
+ K
Sbjct: 1588 DKTRKPK 1594
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 66/134 (49%)
Query: 10 QTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQNKS 69
Q K + K +E ++++ Q ++ +++Q +EQ +EQ +++EQ
Sbjct: 1368 QQKDKTLEHKEVVEPKDTAIYQKDEALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDK 1427
Query: 70 SMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFMEQTKSTMEQ 129
++E + +E+ +EQ E+ ++EQ +++EQ ++E + +EQ +EQ
Sbjct: 1428 ALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKDRVLEQ 1487
Query: 130 TKNSMEQTKNSMEQ 143
+ E+ +++Q
Sbjct: 1488 KEKIPEEKDKALDQ 1501
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 1 MEQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQT 60
+E ++ Q ++ ++Q + ++EQ +EQ ++EQ +E +E+
Sbjct: 1380 VEPKDTAIYQKDEALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEK 1439
Query: 61 KSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFM 120
++EQ E+ + +EQ + +EQ +E +EQ +EQ + E+ + +
Sbjct: 1440 DKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKDRVLEQKEKIPEEKDKAL 1499
Query: 121 EQTKSTMEQ----------TKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQ 164
+Q ++E +EQT + EQ EQ E+ ++EQ
Sbjct: 1500 DQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQAQEQKDKVSEKKDQALEQ 1553
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 1 MEQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQT---KSFMEQTKNSM 57
+EQ ++E +EQ +EQ E E+ +++Q S+E + E +
Sbjct: 1464 LEQKDKALEPKDKDLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDL 1523
Query: 58 EQTKSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTK 117
EQT + EQ + EQ + E+ +EQ + Q ++EQ ++E+ + EQ
Sbjct: 1524 EQTDKAPEQKHQAQEQKDKVSEKKDQALEQKYWALGQKDEALEQNIQALEENHQTQEQES 1583
Query: 118 RFME-QTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKS 153
E +T+ + S E+ K E+ ++ +E+TK+
Sbjct: 1584 LVQEDKTRKPKMLEEKSPEKVKAMEEKLEALLEKTKA 1620
Score = 37.0 bits (84), Expect = 0.070, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 23 EQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQNKSSMEQTKRFMEQTK 82
E + +EQT + EQ + EQ E+ ++EQ ++ Q ++EQ + +E+
Sbjct: 1517 EMKDRDLEQTDKAPEQKHQAQEQKDKVSEKKDQALEQKYWALGQKDEALEQNIQALEENH 1576
Query: 83 STMEQTKSFME-QTKNSMEQTKSSMEQTKSSMEQTKRFMEQTKS-----TMEQTKNSMEQ 136
T EQ E +T+ + S E+ K+ E+ + +E+TK+ ++ Q + EQ
Sbjct: 1577 QTQEQESLVQEDKTRKPKMLEEKSPEKVKAMEEKLEALLEKTKALGLEESLVQEGRAREQ 1636
Query: 137 TKNSMEQTKSFMEQTKSSMEQTKSSMEQTKL 167
+ E ++S + + + EQ +L
Sbjct: 1637 EEKYWRGQDVVQEWQETSPTREEPAGEQKEL 1667
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 1 MEQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQT 60
+EQT + EQ + EQ E+ + ++EQ ++ Q ++EQ +E+ + EQ
Sbjct: 1523 LEQTDKAPEQKHQAQEQKDKVSEKKDQALEQKYWALGQKDEALEQNIQALEENHQTQEQE 1582
Query: 61 KSSME-QNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRF 119
E + + ++ E+ K+ E+ ++ +E+TK + S+ Q + EQ +++
Sbjct: 1583 SLVQEDKTRKPKMLEEKSPEKVKAMEEKLEALLEKTK--ALGLEESLVQEGRAREQEEKY 1640
Query: 120 MEQTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQ 157
E + S + + + EQ + +S EQ
Sbjct: 1641 WRGQDVVQEWQETSPTREEPAGEQKELAPAWEDTSPEQ 1678
>sp|Q1D823|AGLZ_MYXXD Adventurous-gliding motility protein Z OS=Myxococcus xanthus
(strain DK 1622) GN=aglZ PE=1 SV=1
Length = 1395
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 93/150 (62%)
Query: 1 MEQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQT 60
+E T ++ QT+ ++ QT+ + T++++ T+ ++ +T+ ++ T ++QT+ ++ QT
Sbjct: 677 LEATSQTLAQTQQTLAQTEQQLADTQNTLASTEGALAETRGELDATSQTLQQTQQTLAQT 736
Query: 61 KSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFM 120
+ ++ + + ++ T + + QT+ T+ QT+ + T+N++ T+ ++ +T+ +E T + +
Sbjct: 737 EGALAETRGELDATSQTLAQTQQTLAQTEQQLADTQNTLASTEGTLAETRGELEATSQTL 796
Query: 121 EQTKSTMEQTKNSMEQTKNSMEQTKSFMEQ 150
+QT + +E T+ ++++T +++ T +Q
Sbjct: 797 QQTHAALEDTRGALQETSDTLAHTTRERDQ 826
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 98/165 (59%)
Query: 1 MEQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQT 60
+ Q + ++E + + + + +E T ++ QT+ ++ QT+ + T+N++ T
Sbjct: 649 VSQRESTIESLQGDVAARDQRISELSGDLEATSQTLAQTQQTLAQTEQQLADTQNTLAST 708
Query: 61 KSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFM 120
+ ++ + + ++ T + ++QT+ T+ QT+ + +T+ ++ T ++ QT+ ++ QT++ +
Sbjct: 709 EGALAETRGELDATSQTLQQTQQTLAQTEGALAETRGELDATSQTLAQTQQTLAQTEQQL 768
Query: 121 EQTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQT 165
T++T+ T+ ++ +T+ +E T ++QT +++E T+ ++++T
Sbjct: 769 ADTQNTLASTEGTLAETRGELEATSQTLQQTHAALEDTRGALQET 813
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 89/157 (56%)
Query: 8 MEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQN 67
+ + +E T + QT+ ++ QT+ + T+N++ T+ + +T+ ++ T +++Q
Sbjct: 670 ISELSGDLEATSQTLAQTQQTLAQTEQQLADTQNTLASTEGALAETRGELDATSQTLQQT 729
Query: 68 KSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFMEQTKSTM 127
+ ++ QT+ + +T+ ++ T + QT+ ++ QT+ + T++++ T+ + +T+ +
Sbjct: 730 QQTLAQTEGALAETRGELDATSQTLAQTQQTLAQTEQQLADTQNTLASTEGTLAETRGEL 789
Query: 128 EQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQ 164
E T +++QT ++E T+ +++T ++ T +Q
Sbjct: 790 EATSQTLQQTHAALEDTRGALQETSDTLAHTTRERDQ 826
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 97/164 (59%)
Query: 3 QTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKS 62
Q + ++ Q +S++E + + + + + +E T ++ QT+ + QT+ + T++
Sbjct: 644 QLEDTVSQRESTIESLQGDVAARDQRISELSGDLEATSQTLAQTQQTLAQTEQQLADTQN 703
Query: 63 SMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFMEQ 122
++ + ++ +T+ ++ T T++QT+ + QT+ ++ +T+ ++ T ++ QT++ + Q
Sbjct: 704 TLASTEGALAETRGELDATSQTLQQTQQTLAQTEGALAETRGELDATSQTLAQTQQTLAQ 763
Query: 123 TKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQTK 166
T+ + T+N++ T+ ++ +T+ +E T +++QT +++E T+
Sbjct: 764 TEQQLADTQNTLASTEGTLAETRGELEATSQTLQQTHAALEDTR 807
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 90/164 (54%)
Query: 2 EQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTK 61
EQ + Q + ++ Q +S +E + + + + +E T + QT+ ++ QT+
Sbjct: 636 EQLSARVAQLEDTVSQRESTIESLQGDVAARDQRISELSGDLEATSQTLAQTQQTLAQTE 695
Query: 62 SSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFME 121
+ ++++ T+ + +T+ ++ T ++QT+ ++ QT+ ++ +T+ ++ T + +
Sbjct: 696 QQLADTQNTLASTEGALAETRGELDATSQTLQQTQQTLAQTEGALAETRGELDATSQTLA 755
Query: 122 QTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQT 165
QT+ T+ QT+ + T+N++ T+ + +T+ +E T +++QT
Sbjct: 756 QTQQTLAQTEQQLADTQNTLASTEGTLAETRGELEATSQTLQQT 799
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 101/180 (56%)
Query: 1 MEQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQT 60
+E+T+ ++ ++ + EQ + + Q E ++ Q +S++E + + + + +E T
Sbjct: 621 LEETQRQLDDSQRTGEQLSARVAQLEDTVSQRESTIESLQGDVAARDQRISELSGDLEAT 680
Query: 61 KSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFM 120
++ Q + ++ QT++ + T++T+ T+ + +T+ ++ T +++QT+ ++ QT+ +
Sbjct: 681 SQTLAQTQQTLAQTEQQLADTQNTLASTEGALAETRGELDATSQTLQQTQQTLAQTEGAL 740
Query: 121 EQTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQTKLQAKGSKLNYTSCH 180
+T+ ++ T ++ QT+ ++ QT+ + T++++ T+ ++ +T+ + + + H
Sbjct: 741 AETRGELDATSQTLAQTQQTLAQTEQQLADTQNTLASTEGTLAETRGELEATSQTLQQTH 800
Score = 37.4 bits (85), Expect = 0.050, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 91/159 (57%)
Query: 8 MEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQN 67
++ S +E+T+ ++ ++ + EQ + + Q ++++ Q +S +E + + + +
Sbjct: 614 IQALTSQLEETQRQLDDSQRTGEQLSARVAQLEDTVSQRESTIESLQGDVAARDQRISEL 673
Query: 68 KSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFMEQTKSTM 127
+E T + + QT+ T+ QT+ + T+N++ T+ ++ +T+ ++ T + ++QT+ T+
Sbjct: 674 SGDLEATSQTLAQTQQTLAQTEQQLADTQNTLASTEGALAETRGELDATSQTLQQTQQTL 733
Query: 128 EQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQTK 166
QT+ ++ +T+ ++ T + QT+ ++ QT+ + T+
Sbjct: 734 AQTEGALAETRGELDATSQTLAQTQQTLAQTEQQLADTQ 772
Score = 33.5 bits (75), Expect = 0.81, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 87/154 (56%)
Query: 15 MEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQNKSSMEQT 74
++ S +E+T+ ++ ++ + EQ + Q + + Q ++++E + + + +
Sbjct: 614 IQALTSQLEETQRQLDDSQRTGEQLSARVAQLEDTVSQRESTIESLQGDVAARDQRISEL 673
Query: 75 KRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFMEQTKSTMEQTKNSM 134
+E T T+ QT+ + QT+ + T++++ T+ ++ +T+ ++ T T++QT+ ++
Sbjct: 674 SGDLEATSQTLAQTQQTLAQTEQQLADTQNTLASTEGALAETRGELDATSQTLQQTQQTL 733
Query: 135 EQTKNSMEQTKSFMEQTKSSMEQTKSSMEQTKLQ 168
QT+ ++ +T+ ++ T ++ QT+ ++ QT+ Q
Sbjct: 734 AQTEGALAETRGELDATSQTLAQTQQTLAQTEQQ 767
>sp|P22006|SVS2_RAT Seminal vesicle secretory protein 2 OS=Rattus norvegicus GN=Svs2
PE=1 SV=1
Length = 414
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 79/169 (46%), Gaps = 30/169 (17%)
Query: 7 SMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQ 66
S Q K+S Q KSF Q ++S Q KS Q K+S Q KSF Q K+S Q KS Q
Sbjct: 145 SFGQVKASGSQLKSF-GQVKASGSQLKS-YGQMKSSGSQVKSF-GQMKSSGSQVKS-FGQ 200
Query: 67 NKSSMEQTKRF------------------MEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQ 108
K+S Q K F QTKS Q KSF Q K+ Q KSS Q
Sbjct: 201 MKASESQIKSFGQRKSQGGQLQSYGQMKSYGQTKSLESQAKSF-GQVKSQSGQMKSSYGQ 259
Query: 109 TKSSMEQT--KRFME--QTKSTME---QTKNSMEQTKNSMEQTKSFMEQ 150
KS E+T K F + Q KS + Q ++S Q K+ Q KSF +Q
Sbjct: 260 RKSYGEETQLKSFDQDAQLKSYGQQKSQKQSSFSQVKSQSAQLKSFGQQ 308
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 7 SMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQ 66
S Q KSS Q KSF Q ++S Q KS Q K S Q KS+ Q K+S Q KS Q
Sbjct: 132 SFGQVKSSESQLKSF-GQVKASGSQLKS-FGQVKASGSQLKSY-GQMKSSGSQVKS-FGQ 187
Query: 67 NKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKS-----SMEQTKSSMEQTKRFME 121
KSS Q K F Q K++ Q KSF Q K+ Q +S S QTKS Q K F
Sbjct: 188 MKSSGSQVKSF-GQMKASESQIKSF-GQRKSQGGQLQSYGQMKSYGQTKSLESQAKSF-G 244
Query: 122 QTKSTMEQTKNSMEQTKNSMEQT--KSF-------------------MEQTKSSMEQTKS 160
Q KS Q K+S Q K+ E+T KSF Q KS Q KS
Sbjct: 245 QVKSQSGQMKSSYGQRKSYGEETQLKSFDQDAQLKSYGQQKSQKQSSFSQVKSQSAQLKS 304
Query: 161 SMEQTKLQA 169
+Q L+
Sbjct: 305 FGQQKSLKG 313
>sp|Q9X0N0|MCP3_THEMA Methyl-accepting chemotaxis protein 3 OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=mcp3 PE=1 SV=1
Length = 539
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 2 EQTKISMEQTKSSMEQTKSFMEQTESSMEQTK-----SSMEQTKNS---------MEQTK 47
E TK ++ + S E S ++ S EQT +++E + ++ +
Sbjct: 339 ENTKQALNRLLSMAENINSIVDTINSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEIR 398
Query: 48 SFMEQTKNSMEQTKSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSME 107
E++K + +Q + + + + + + +E T S +E+T S +E K+ E + +ME
Sbjct: 399 KLAEESKAATQQIGEILGKLRDEINNSSKIVESTASAIEETASLVESIKDVFESIRIAME 458
Query: 108 QTKSSMEQTKRFMEQTKSTMEQTKNSMEQTKNSMEQTKSFMEQTK-------SSMEQTKS 160
+S +E ST EQ+ S+E+ + + + +T+ S++++ +
Sbjct: 459 DVQSRVESV------AASTQEQSA-SLEELSAGVTRLTELLNKTRENTSSANSALQEANA 511
Query: 161 SMEQ 164
++E+
Sbjct: 512 ALEE 515
>sp|Q9HK21|SMC_THEAC Chromosome partition protein Smc OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=smc PE=3 SV=1
Length = 1140
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/157 (18%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 20 SFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTK---------SSMEQNKSS 70
S ++Q +S +E+ K+ +E +ME ++ +++ + ++E+ + ++ + K
Sbjct: 158 SGVDQFDSEIERVKADIEAVSRNMEINQTIIDEKRQNLERLRTEKEKKERYDALLKRKRD 217
Query: 71 MEQT-----KRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSM-----EQTKRFM 120
+E T K ME+ K T+E S + + +E+ +S +E+ ++ + KR
Sbjct: 218 VEYTEILNRKNAMERQKRTIEGQISDLTKEIAQLEERRSDLEKRSEAIRIRREDVAKRID 277
Query: 121 EQTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQ 157
+ T M + K + + + + + +++ +ME+
Sbjct: 278 DLTSGEMNRVKTDLHSVEVDIAKIRGIIDEKNRNMEK 314
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 48 SFMEQTKNSMEQTKSSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSME 107
S+ Q + + + S ++Q S +E+ K +E ME ++ +++ + ++E+ ++ E
Sbjct: 144 SYSGQERRKLIERISGVDQFDSEIERVKADIEAVSRNMEINQTIIDEKRQNLERLRTEKE 203
Query: 108 --QTKSSMEQTKRFMEQTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQ 164
+ ++ + KR +E T+ + KN+ME+ K ++E S + + + +E+ +S +E+
Sbjct: 204 KKERYDALLKRKRDVEYTE--ILNRKNAMERQKRTIEGQISDLTKEIAQLEERRSDLEK 260
>sp|P70194|CLC4F_MOUSE C-type lectin domain family 4 member F OS=Mus musculus GN=Clec4f
PE=1 SV=1
Length = 548
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/184 (17%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 12 KSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQT---KNSMEQTKSSMEQNK 68
K M+ S ++ S +E + + QTK+ ++++ + +T ++S+E + + +
Sbjct: 127 KYQMDNVSSLVQLLGSHLEDVNADILQTKDVLKESGALALETQALRSSLEVASADIHSLR 186
Query: 69 SSMEQTKRFMEQTKSTM----EQTKSFMEQTKNSMEQTKSSMEQTKSSME-------QTK 117
+E+ QT+ + E T + + +E+ +S ++ + S++ QT+
Sbjct: 187 GDLEKANAMTSQTRGLLKSSTENTSAELHVLGRGLEEAQSEIQALRGSLQSANDLSSQTQ 246
Query: 118 RF----MEQTKSTMEQTKNSMEQTKNSMEQTKSFME-------QTKSSMEQTKSSMEQTK 166
F M+ + ++ ++ ME+ M K +E + +EQT + ++ K
Sbjct: 247 GFLQHSMDNISAQIQTVRDGMERAGEKMNSLKKELETLTAQTQKANGHLEQTDAQIQGLK 306
Query: 167 LQAK 170
+ K
Sbjct: 307 AELK 310
>sp|P80544|PLS_STAAU Surface protein OS=Staphylococcus aureus GN=pls PE=1 SV=2
Length = 1637
Score = 33.5 bits (75), Expect = 0.82, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 67/161 (41%)
Query: 4 TKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSS 63
TK + EQ + + + TE + T+ + + E T + E+T +
Sbjct: 92 TKDTTEQASTEEKANTTEQASTEEKADTTEQATTEEAPKAEGTDKVETEEAPKAEETDKA 151
Query: 64 MEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFMEQT 123
+ E+T + E+ T E K+ E+ + E +K++ E+ + E +K E+
Sbjct: 152 TTEEAPKAEETDKATEEAPKTEETDKATTEEAPAAEETSKAATEEAPKAEETSKAATEEA 211
Query: 124 KSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQ 164
E K + E+ + E K E+ + E +K++ E+
Sbjct: 212 PKAEETEKTATEEAPKTEETDKVETEEAPKAEETSKAATEK 252
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 68/166 (40%)
Query: 2 EQTKISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTK 61
EQ + + T+ + TE + + E T + E+T + +
Sbjct: 97 EQASTEEKANTTEQASTEEKADTTEQATTEEAPKAEGTDKVETEEAPKAEETDKATTEEA 156
Query: 62 SSMEQNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFME 121
E+ + E+ + E K+T E+ + E +K + E+ + E +K++ E+ + E
Sbjct: 157 PKAEETDKATEEAPKTEETDKATTEEAPAAEETSKAATEEAPKAEETSKAATEEAPKAEE 216
Query: 122 QTKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSMEQTKL 167
K+ E+ + E K E+ E +K++ E+ + E K+
Sbjct: 217 TEKTATEEAPKTEETDKVETEEAPKAEETSKAATEKAPKAEETNKV 262
Score = 31.6 bits (70), Expect = 2.9, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 64/138 (46%)
Query: 23 EQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQNKSSMEQTKRFMEQTK 82
E+T+ + + E+T + E+ E K + E+ ++ E +K++ E+ + E +K
Sbjct: 146 EETDKATTEEAPKAEETDKATEEAPKTEETDKATTEEAPAAEETSKAATEEAPKAEETSK 205
Query: 83 STMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFMEQTKSTMEQTKNSMEQTKNSME 142
+ E+ E K + E+ + E K E+ + E +K+ E+ + E K E
Sbjct: 206 AATEEAPKAEETEKTATEEAPKTEETDKVETEEAPKAEETSKAATEKAPKAEETNKVETE 265
Query: 143 QTKSFMEQTKSSMEQTKS 160
+ + E K++ E+T +
Sbjct: 266 EAPAAEETNKAATEETPA 283
Score = 30.4 bits (67), Expect = 6.0, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 68/153 (44%)
Query: 9 EQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSMEQNK 68
E+T + + E+T+ + E+ + E K + E+ + E +K + E+ + E +K
Sbjct: 146 EETDKATTEEAPKAEETDKATEEAPKTEETDKATTEEAPAAEETSKAATEEAPKAEETSK 205
Query: 69 SSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFMEQTKSTME 128
++ E+ + E K+ E+ E K E+ + E +K++ E+ + E K E
Sbjct: 206 AATEEAPKAEETEKTATEEAPKTEETDKVETEEAPKAEETSKAATEKAPKAEETNKVETE 265
Query: 129 QTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSS 161
+ + E K + E+T + + S + S
Sbjct: 266 EAPAAEETNKAATEETPAVEDTNAKSNSNAQPS 298
>sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acanthamoeba castellanii PE=3
SV=1
Length = 1509
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 90/182 (49%), Gaps = 28/182 (15%)
Query: 8 MEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQ---TKSFMEQTKNSME----QT 60
+ +TK ++ ++ E S ++ T+ + +N ++ TK +E+TK S+E QT
Sbjct: 1012 LRETKDALADAENISETLRSKLKNTERGADDVRNELDDVTATKLQLEKTKKSLEEELAQT 1071
Query: 61 KSSMEQNKSSME-------QTKRFMEQTKSTMEQTKSFMEQTKNSM----EQTKSSMEQ- 108
++ +E+ KS E Q + +E +S ++ KS + + S+ +Q + EQ
Sbjct: 1072 RAQLEEEKSGKEAASSKAKQLGQQLEDARSEVDSLKSKLSAAEKSLKTAKDQNRDLDEQL 1131
Query: 109 -----TKSSMEQTKRFMEQTKSTMEQTKNSMEQTKNSMEQ----TKSFMEQTKSSMEQTK 159
++++++ K+ +E + +E +++ KN+ K+ +++TK +E+ +
Sbjct: 1132 EDERTVRANVDKQKKALEAKLTELEDQVTALDGQKNAAAAQAKTLKTQVDETKRRLEEAE 1191
Query: 160 SS 161
+S
Sbjct: 1192 AS 1193
Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 10 QTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSM----EQTKSFMEQTKNSMEQTKSSME 65
+ K+S+E+ E+ ++++ K+ +E +N + E + + K E +
Sbjct: 958 ELKASLEEE----ERNRKALQEAKTKVESERNELQDKYEDEAAAHDSLKKKEEDLSRELR 1013
Query: 66 QNKSSMEQTKRFMEQTKSTMEQTKSFMEQTKNSMEQ---TKSSMEQTKSSMEQTKRFMEQ 122
+ K ++ + E +S ++ T+ + +N ++ TK +E+TK S+E+ + Q
Sbjct: 1014 ETKDALADAENISETLRSKLKNTERGADDVRNELDDVTATKLQLEKTKKSLEEE---LAQ 1070
Query: 123 TKSTMEQTKNSMEQTKNSMEQTKSFMEQTKSSMEQTKSSM 162
T++ +E+ K+ E + +Q +E +S ++ KS +
Sbjct: 1071 TRAQLEEEKSGKEAASSKAKQLGQQLEDARSEVDSLKSKL 1110
Score = 30.0 bits (66), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 82/172 (47%), Gaps = 11/172 (6%)
Query: 6 ISMEQTKSSMEQTKSFMEQTESSMEQTKSSMEQTKNSMEQTKSFMEQTKNSMEQTKSSME 65
+ +E K+ +E+ + +++ + +E+ N + + K +E K ++ + E
Sbjct: 908 LDLEGEKADLEEDNALLQKKVAGLEEELQEETSASNDILEQKRKLEAEKGELKASLEEEE 967
Query: 66 QNKSSMEQTKRFMEQTKSTM----EQTKSFMEQTKNSMEQTKSSMEQTKSSMEQTKRFME 121
+N+ ++++ K +E ++ + E + + K E + +TK ++ + E
Sbjct: 968 RNRKALQEAKTKVESERNELQDKYEDEAAAHDSLKKKEEDLSRELRETKDALADAENISE 1027
Query: 122 QTKSTMEQTKNSMEQTKNSMEQ---TKSFMEQTKSSME----QTKSSMEQTK 166
+S ++ T+ + +N ++ TK +E+TK S+E QT++ +E+ K
Sbjct: 1028 TLRSKLKNTERGADDVRNELDDVTATKLQLEKTKKSLEEELAQTRAQLEEEK 1079
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.292 0.0996 0.230
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,182,736
Number of Sequences: 539616
Number of extensions: 1041008
Number of successful extensions: 27934
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 1464
Number of HSP's that attempted gapping in prelim test: 11783
Number of HSP's gapped (non-prelim): 9630
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.8 bits)
S2: 57 (26.6 bits)