Query psy5171
Match_columns 180
No_of_seqs 45 out of 47
Neff 2.9
Searched_HMMs 13730
Date Fri Aug 16 19:11:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5171.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5171hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ttka_ g.3.6.1 (A:) Conotoxin 1.7 4E+02 0.029 14.1 0.8 11 169-179 6-16 (26)
2 d1h32a1 a.3.1.8 (A:1-150) Di-h 0.9 3.2E+02 0.024 19.0 -1.4 9 172-180 72-80 (150)
3 d2ef1a1 c.23.14.3 (A:45-291) A 0.8 7.2E+02 0.052 19.0 0.4 9 171-179 121-129 (247)
4 d2rdea1 b.45.2.1 (A:138-247) H 0.8 6.5E+02 0.047 17.3 0.1 6 174-179 76-81 (110)
5 d1h32b_ a.3.1.1 (B:) Mono-heme 0.7 8.5E+02 0.062 15.0 0.5 6 175-180 41-46 (138)
6 d1g31a_ b.35.1.1 (A:) GP31 co- 0.7 5.4E+02 0.04 17.7 -0.6 6 175-180 93-98 (107)
7 d1dgsa2 b.40.4.6 (A:315-400) N 0.7 7E+02 0.051 15.9 -0.1 11 170-180 33-43 (86)
8 d1ozbi_ g.74.1.1 (I:) Preprote 0.7 1.2E+03 0.087 12.1 0.9 10 171-180 10-19 (26)
9 d1r12a_ c.23.14.3 (A:) ADP rib 0.7 9.8E+02 0.072 18.1 0.8 9 171-179 117-125 (251)
10 d1xuva_ d.129.3.5 (A:) Hypothe 0.6 1.9E+03 0.14 13.2 2.0 19 61-79 145-163 (163)
No 1
>d1ttka_ g.3.6.1 (A:) Conotoxin {Sea snail (Conus magus), M VIIa [TaxId: 6492]}
Probab=1.70 E-value=4e+02 Score=14.09 Aligned_cols=11 Identities=55% Similarity=0.899 Sum_probs=8.5
Q ss_pred hcccccccccC
Q psy5171 169 AKGSKLNYTSC 179 (180)
Q Consensus 169 ~~~s~l~y~~~ 179 (180)
++-+.|.|-.|
T Consensus 6 akcsrlmydcc 16 (26)
T d1ttka_ 6 AKCSRLMYDCC 16 (26)
T ss_dssp SBCCTTTCCCT
T ss_pred ccHhHHHHHhc
Confidence 46688999877
No 2
>d1h32a1 a.3.1.8 (A:1-150) Di-heme cytochrome c SoxA {Rhodovulum sulfidophilum [TaxId: 35806]}
Probab=0.88 E-value=3.2e+02 Score=18.96 Aligned_cols=9 Identities=22% Similarity=0.549 Sum_probs=5.8
Q ss_pred cccccccCC
Q psy5171 172 SKLNYTSCH 180 (180)
Q Consensus 172 s~l~y~~~~ 180 (180)
.-+.+++||
T Consensus 72 ~g~SCasCH 80 (150)
T d1h32a1 72 EGKACADCH 80 (150)
T ss_dssp TCCCHHHHH
T ss_pred CCCCHHHHh
Confidence 455677776
No 3
>d2ef1a1 c.23.14.3 (A:45-291) ADP ribosyl cyclase {Human (Homo sapiens) [TaxId: 9606]}
Probab=0.80 E-value=7.2e+02 Score=18.97 Aligned_cols=9 Identities=67% Similarity=1.198 Sum_probs=5.5
Q ss_pred ccccccccC
Q psy5171 171 GSKLNYTSC 179 (180)
Q Consensus 171 ~s~l~y~~~ 179 (180)
.+.+||.+|
T Consensus 121 ~~g~nY~sC 129 (247)
T d2ef1a1 121 TSKINYQSC 129 (247)
T ss_dssp CCCCCCSEE
T ss_pred CCCCCCCcC
Confidence 455666666
No 4
>d2rdea1 b.45.2.1 (A:138-247) Hypothetical protein VCA0042, C-terminal domain {Vibrio cholerae O395 [TaxId: 345073]}
Probab=0.78 E-value=6.5e+02 Score=17.31 Aligned_cols=6 Identities=17% Similarity=0.163 Sum_probs=2.9
Q ss_pred cccccC
Q psy5171 174 LNYTSC 179 (180)
Q Consensus 174 l~y~~~ 179 (180)
.|||.|
T Consensus 76 ~hyary 81 (110)
T d2rdea1 76 LHHARY 81 (110)
T ss_dssp SSCEEE
T ss_pred hccccc
Confidence 455544
No 5
>d1h32b_ a.3.1.1 (B:) Mono-heme c-type cytochrome SoxX {Rhodovulum sulfidophilum [TaxId: 35806]}
Probab=0.74 E-value=8.5e+02 Score=15.00 Aligned_cols=6 Identities=50% Similarity=1.182 Sum_probs=3.2
Q ss_pred ccccCC
Q psy5171 175 NYTSCH 180 (180)
Q Consensus 175 ~y~~~~ 180 (180)
+-+.||
T Consensus 41 ~C~aCH 46 (138)
T d1h32b_ 41 NCIACH 46 (138)
T ss_dssp CGGGTC
T ss_pred CcccCC
Confidence 445566
No 6
>d1g31a_ b.35.1.1 (A:) GP31 co-chaperonin {Bacteriophage T4 [TaxId: 10665]}
Probab=0.72 E-value=5.4e+02 Score=17.67 Aligned_cols=6 Identities=33% Similarity=1.381 Sum_probs=2.6
Q ss_pred ccccCC
Q psy5171 175 NYTSCH 180 (180)
Q Consensus 175 ~y~~~~ 180 (180)
-|..||
T Consensus 93 ~~vt~H 98 (107)
T d1g31a_ 93 KFVTCH 98 (107)
T ss_dssp CEEEEE
T ss_pred heeehh
Confidence 344444
No 7
>d1dgsa2 b.40.4.6 (A:315-400) NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}
Probab=0.69 E-value=7e+02 Score=15.90 Aligned_cols=11 Identities=27% Similarity=0.549 Sum_probs=5.8
Q ss_pred cccccccccCC
Q psy5171 170 KGSKLNYTSCH 180 (180)
Q Consensus 170 ~~s~l~y~~~~ 180 (180)
+|....||++|
T Consensus 33 ~G~~V~~atlh 43 (86)
T d1dgsa2 33 EGSEVSRVTLH 43 (86)
T ss_dssp TTEEEEEEECC
T ss_pred cCceEeEEecC
Confidence 34455555555
No 8
>d1ozbi_ g.74.1.1 (I:) Preprotein translocase SecA C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=0.69 E-value=1.2e+03 Score=12.14 Aligned_cols=10 Identities=50% Similarity=1.052 Sum_probs=5.7
Q ss_pred ccccccccCC
Q psy5171 171 GSKLNYTSCH 180 (180)
Q Consensus 171 ~s~l~y~~~~ 180 (180)
||.-.|--||
T Consensus 10 gSgkkyK~C~ 19 (26)
T d1ozbi_ 10 GSGKKYKHCH 19 (26)
T ss_dssp TCSSBGGGTT
T ss_pred CCCccHHHcC
Confidence 3445566666
No 9
>d1r12a_ c.23.14.3 (A:) ADP ribosyl cyclase {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=0.69 E-value=9.8e+02 Score=18.11 Aligned_cols=9 Identities=22% Similarity=0.497 Sum_probs=5.8
Q ss_pred ccccccccC
Q psy5171 171 GSKLNYTSC 179 (180)
Q Consensus 171 ~s~l~y~~~ 179 (180)
.+.++|.+|
T Consensus 117 ~~g~ny~sC 125 (251)
T d1r12a_ 117 NPGFNEKVC 125 (251)
T ss_dssp TTSBCSSCC
T ss_pred CCCCCcccC
Confidence 455777776
No 10
>d1xuva_ d.129.3.5 (A:) Hypothetical protein MM0500 {Methanosarcina mazei [TaxId: 2209]}
Probab=0.61 E-value=1.9e+03 Score=13.18 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=0.0
Q ss_pred hhHHHhhhhhhhhhhhhhh
Q psy5171 61 KSSMEQNKSSMEQTKRFME 79 (180)
Q Consensus 61 ~sSl~Q~~sSldQ~~sSl~ 79 (180)
...|++++.=++..+.++|
T Consensus 145 ~~~L~~L~~~le~~~~~~~ 163 (163)
T d1xuva_ 145 NDSYERLDELLEKMKKLEH 163 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccC
Done!