BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy518
(81 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156542829|ref|XP_001608109.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Nasonia
vitripennis]
Length = 158
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 76/79 (96%)
Query: 3 TVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKR 62
+ SPSVELSSYRDQHFKGSRAEQ++LLR ++TLYVGNLS+YTTEEQ+YELFSKCGDIKR
Sbjct: 2 NINSPSVELSSYRDQHFKGSRAEQDRLLRNSTTLYVGNLSFYTTEEQIYELFSKCGDIKR 61
Query: 63 IIMGLDKYKKTPCGFCFLE 81
IIMGLDKYKKTPCGFCF+E
Sbjct: 62 IIMGLDKYKKTPCGFCFME 80
>gi|270006915|gb|EFA03363.1| hypothetical protein TcasGA2_TC013348 [Tribolium castaneum]
Length = 161
Score = 150 bits (380), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 79/81 (97%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M+T+ SPSVELSSYRDQHFKG+RAEQ++LLR ++TLYVGNLS+YTTEEQ+YELFSKCGDI
Sbjct: 1 MSTISSPSVELSSYRDQHFKGTRAEQDRLLRLSTTLYVGNLSFYTTEEQIYELFSKCGDI 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+R++MGLDKYKKTPCGFCF+E
Sbjct: 61 RRVVMGLDKYKKTPCGFCFVE 81
>gi|189237587|ref|XP_975066.2| PREDICTED: similar to Cbp20 [Tribolium castaneum]
Length = 182
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 79/81 (97%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M+T+ SPSVELSSYRDQHFKG+RAEQ++LLR ++TLYVGNLS+YTTEEQ+YELFSKCGDI
Sbjct: 1 MSTISSPSVELSSYRDQHFKGTRAEQDRLLRLSTTLYVGNLSFYTTEEQIYELFSKCGDI 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+R++MGLDKYKKTPCGFCF+E
Sbjct: 61 RRVVMGLDKYKKTPCGFCFVE 81
>gi|307197645|gb|EFN78824.1| Nuclear cap-binding protein subunit 2 [Harpegnathos saltator]
Length = 165
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 75/76 (98%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
SPSVELSSYRDQHFKGSRAEQ++LLR +STLYVGNLS+YTTEEQ+YELFSKCGD++RIIM
Sbjct: 10 SPSVELSSYRDQHFKGSRAEQDRLLRNSSTLYVGNLSFYTTEEQIYELFSKCGDVRRIIM 69
Query: 66 GLDKYKKTPCGFCFLE 81
GLDKYKKTPCGFCF+E
Sbjct: 70 GLDKYKKTPCGFCFIE 85
>gi|332030010|gb|EGI69835.1| Nuclear cap-binding protein subunit 2 [Acromyrmex echinatior]
Length = 165
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 76/81 (93%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
+ T SPSVELSSYRDQHFKG+RAEQ++LLR + TLYVGNLS+YTTEEQ+YELFSKCGDI
Sbjct: 5 LNTTSSPSVELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDI 64
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+RIIMGLDKYKKTPCGFCF+E
Sbjct: 65 RRIIMGLDKYKKTPCGFCFIE 85
>gi|380016916|ref|XP_003692414.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Apis
florea]
Length = 166
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 75/76 (98%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
SPSVELSSYRDQHFKGSRAEQ++LLR ++TLYVGNLS+YTTEEQ+YELFSKCGDI+RIIM
Sbjct: 11 SPSVELSSYRDQHFKGSRAEQDRLLRNSTTLYVGNLSFYTTEEQIYELFSKCGDIRRIIM 70
Query: 66 GLDKYKKTPCGFCFLE 81
GLDKYKKTPCGFCF+E
Sbjct: 71 GLDKYKKTPCGFCFVE 86
>gi|48142250|ref|XP_397316.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Apis
mellifera]
Length = 166
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 75/76 (98%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
SPSVELSSYRDQHFKGSRAEQ++LLR ++TLYVGNLS+YTTEEQ+YELFSKCGDI+RIIM
Sbjct: 11 SPSVELSSYRDQHFKGSRAEQDRLLRNSTTLYVGNLSFYTTEEQIYELFSKCGDIRRIIM 70
Query: 66 GLDKYKKTPCGFCFLE 81
GLDKYKKTPCGFCF+E
Sbjct: 71 GLDKYKKTPCGFCFVE 86
>gi|340712465|ref|XP_003394780.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Bombus
terrestris]
gi|350399792|ref|XP_003485640.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Bombus
impatiens]
Length = 166
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 75/76 (98%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
SPSVELSSYRDQHFKGSRAEQ++LLR ++TLYVGNLS+YTTEEQ+YELFSKCGDI+RIIM
Sbjct: 11 SPSVELSSYRDQHFKGSRAEQDRLLRISTTLYVGNLSFYTTEEQIYELFSKCGDIRRIIM 70
Query: 66 GLDKYKKTPCGFCFLE 81
GLDKYKKTPCGFCF+E
Sbjct: 71 GLDKYKKTPCGFCFVE 86
>gi|242022257|ref|XP_002431557.1| Nuclear cap-binding protein subunit, putative [Pediculus humanus
corporis]
gi|212516860|gb|EEB18819.1| Nuclear cap-binding protein subunit, putative [Pediculus humanus
corporis]
Length = 170
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 65/80 (81%), Positives = 76/80 (95%)
Query: 2 TTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIK 61
++ +PSVELSSYRDQHFKGSR EQE+LLR +STLYVGNL++YTTEEQ+YELFSKCGDIK
Sbjct: 3 SSAATPSVELSSYRDQHFKGSRGEQERLLRVSSTLYVGNLAFYTTEEQIYELFSKCGDIK 62
Query: 62 RIIMGLDKYKKTPCGFCFLE 81
RIIMGLDK++KTPCGFCF+E
Sbjct: 63 RIIMGLDKFRKTPCGFCFVE 82
>gi|322789715|gb|EFZ14881.1| hypothetical protein SINV_03383 [Solenopsis invicta]
Length = 165
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 76/81 (93%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
+ T SPSVELSSYRDQHFKG+RAEQ++LLR + TLYVGNLS+YTTEEQ+YELFSKCGDI
Sbjct: 5 VNTGSSPSVELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDI 64
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+RIIMGLDKYKKTPCGFCF+E
Sbjct: 65 RRIIMGLDKYKKTPCGFCFVE 85
>gi|307186261|gb|EFN71924.1| Nuclear cap-binding protein subunit 2 [Camponotus floridanus]
Length = 165
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/81 (80%), Positives = 77/81 (95%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
+++ + S+ELSSYRDQHFKGSRAEQ++LLR +STLYVGNLS+YTTEEQ+YELFSKCGDI
Sbjct: 5 LSSNTTSSIELSSYRDQHFKGSRAEQDRLLRNSSTLYVGNLSFYTTEEQIYELFSKCGDI 64
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+RIIMGLDKYKKTPCGFCF+E
Sbjct: 65 RRIIMGLDKYKKTPCGFCFVE 85
>gi|157112409|ref|XP_001657521.1| 20 Kd nuclear cap binding protein [Aedes aegypti]
gi|122106168|sp|Q177H0.1|NCBP2_AEDAE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|108878082|gb|EAT42307.1| AAEL006135-PA [Aedes aegypti]
Length = 159
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 76/81 (93%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
MT+V +PSV LS YRDQHFKGSR EQE+LLR TSTLY+GNLS+YTTEEQ++ELFS+CGDI
Sbjct: 1 MTSVHTPSVALSKYRDQHFKGSRHEQERLLRLTSTLYIGNLSFYTTEEQIHELFSRCGDI 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+RI+MGLDK+KKTPCGFCF+E
Sbjct: 61 RRIVMGLDKFKKTPCGFCFVE 81
>gi|170034725|ref|XP_001845223.1| nuclear cap-binding protein subunit 2 [Culex quinquefasciatus]
gi|259511394|sp|B0W939.1|NCBP2_CULQU RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|167876353|gb|EDS39736.1| nuclear cap-binding protein subunit 2 [Culex quinquefasciatus]
Length = 160
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/81 (77%), Positives = 76/81 (93%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
MT+V +PSV LS YRDQHFKGSR EQE+LLR +STLY+GNLS+YTTEEQ++ELFS+CGDI
Sbjct: 1 MTSVHTPSVALSKYRDQHFKGSRHEQERLLRNSSTLYIGNLSFYTTEEQIHELFSRCGDI 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+RI+MGLDK+KKTPCGFCF+E
Sbjct: 61 RRIVMGLDKFKKTPCGFCFVE 81
>gi|357615171|gb|EHJ69508.1| nuclear cap-binding protein subunit 2 [Danaus plexippus]
Length = 151
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/77 (81%), Positives = 74/77 (96%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
++ S+E+SSYRDQHFKGSR EQEKLLR +STLY+GNLS+YTTEEQ+YELFS+CGDI+R+I
Sbjct: 1 MNSSIEISSYRDQHFKGSRTEQEKLLRASSTLYIGNLSFYTTEEQIYELFSRCGDIRRVI 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCFLE
Sbjct: 61 MGLDKYKKTPCGFCFLE 77
>gi|118782613|ref|XP_312392.3| AGAP002547-PA [Anopheles gambiae str. PEST]
gi|259511484|sp|Q7QCB6.3|NCBP2_ANOGA RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|116129651|gb|EAA07524.3| AGAP002547-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/81 (77%), Positives = 75/81 (92%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
+ +V +PSV LS YRDQHFKGSR EQEKLLR +STLYVGNLS+YTTEEQ++ELFS+CGD+
Sbjct: 5 IQSVHTPSVSLSKYRDQHFKGSRHEQEKLLRVSSTLYVGNLSFYTTEEQIHELFSRCGDV 64
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+RIIMGLDK+KKTPCGFCF+E
Sbjct: 65 RRIIMGLDKFKKTPCGFCFVE 85
>gi|391342380|ref|XP_003745498.1| PREDICTED: nuclear cap-binding protein subunit 2-like
[Metaseiulus occidentalis]
Length = 152
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 75/76 (98%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
SPSV+LS+YRDQHFKGSRAEQE+LLRT++TLYVGNLS+YTTEEQ++ELF +CGD+KR+IM
Sbjct: 3 SPSVDLSAYRDQHFKGSRAEQERLLRTSTTLYVGNLSFYTTEEQIFELFDRCGDVKRVIM 62
Query: 66 GLDKYKKTPCGFCFLE 81
GLD+++KTPCGFCF+E
Sbjct: 63 GLDRFQKTPCGFCFVE 78
>gi|198424069|ref|XP_002127821.1| PREDICTED: similar to nuclear cap binding protein subunit 2
[Ciona intestinalis]
Length = 185
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 72/76 (94%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
P V+L++YRDQHFKGSR +QEKLL+ +STLYVGNLSYYTTEEQ+YELFSKCGD+KR++M
Sbjct: 17 DPGVDLTAYRDQHFKGSRMQQEKLLKMSSTLYVGNLSYYTTEEQIYELFSKCGDLKRVVM 76
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK+KKTPCGFCF+E
Sbjct: 77 GLDKFKKTPCGFCFVE 92
>gi|112983130|ref|NP_001037598.1| nuclear cap-binding protein subunit 2 [Bombyx mori]
gi|122119432|sp|Q1HE01.1|NCBP2_BOMMO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|95115190|gb|ABF55961.1| Cbp20 [Bombyx mori]
Length = 154
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 75/77 (97%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
++ S+E+SSYRDQHFKGSR+EQEKLL+ +STLY+GNLS+YTTEEQ+YEL+S+CGDI+R+I
Sbjct: 1 MNSSIEISSYRDQHFKGSRSEQEKLLKASSTLYMGNLSFYTTEEQIYELYSRCGDIRRVI 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|389610041|dbj|BAM18632.1| cap binding protein 20 [Papilio xuthus]
Length = 161
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 73/78 (93%)
Query: 4 VISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRI 63
++ S+E+SSYRDQHFKGSR EQEKLLR +STLY+GNLS+YTTEEQ+YELF +CG+I+R+
Sbjct: 7 TMNSSIEISSYRDQHFKGSRNEQEKLLRASSTLYIGNLSFYTTEEQIYELFMRCGEIRRV 66
Query: 64 IMGLDKYKKTPCGFCFLE 81
+MGLDKYKKTPCGFCF+E
Sbjct: 67 VMGLDKYKKTPCGFCFVE 84
>gi|346472403|gb|AEO36046.1| hypothetical protein [Amblyomma maculatum]
Length = 152
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 71/74 (95%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
S ELSSYRDQHFKGSRAEQE+LLR +STLY+GN+S+YTTEEQ+YELFSKCGD+K++IMGL
Sbjct: 2 SAELSSYRDQHFKGSRAEQERLLRCSSTLYIGNMSFYTTEEQIYELFSKCGDVKKVIMGL 61
Query: 68 DKYKKTPCGFCFLE 81
D++ KTPCGFCF+E
Sbjct: 62 DRFHKTPCGFCFVE 75
>gi|195107363|ref|XP_001998283.1| GI23717 [Drosophila mojavensis]
gi|259511685|sp|B4KCD5.1|NCBP2_DROMO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|193914877|gb|EDW13744.1| GI23717 [Drosophila mojavensis]
Length = 154
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 73/77 (94%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
+S S++LSSYRDQHFKGSR+EQE+ LR +STLYVGNLS+YTTEEQ++ELFS+CGD++ I+
Sbjct: 1 MSASIDLSSYRDQHFKGSRSEQERSLRDSSTLYVGNLSFYTTEEQIHELFSRCGDVRIIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|194900298|ref|XP_001979694.1| GG22670 [Drosophila erecta]
gi|259511301|sp|B3P0D7.1|NCBP2_DROER RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|190651397|gb|EDV48652.1| GG22670 [Drosophila erecta]
Length = 154
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 72/77 (93%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
+S SVELSSYRDQHFKGSR+EQE+ LR + TLYVGNLS+YTTEEQ++ELFS+CGD++ I+
Sbjct: 1 MSASVELSSYRDQHFKGSRSEQERSLRGSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|241116714|ref|XP_002401570.1| Cap binding protein, putative [Ixodes scapularis]
gi|259511692|sp|B7P877.1|NCBP2_IXOSC RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|215493158|gb|EEC02799.1| Cap binding protein, putative [Ixodes scapularis]
Length = 152
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 72/74 (97%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
SV+LSSYRDQHFKGSR+EQE+LLR ++TLYVGN+S+YTTEEQ+YELFSKCGD+K++IMGL
Sbjct: 2 SVDLSSYRDQHFKGSRSEQERLLRLSTTLYVGNMSFYTTEEQIYELFSKCGDVKKVIMGL 61
Query: 68 DKYKKTPCGFCFLE 81
D++ KTPCGFCF+E
Sbjct: 62 DRFHKTPCGFCFVE 75
>gi|195497527|ref|XP_002096138.1| GE25514 [Drosophila yakuba]
gi|259511690|sp|B4PL68.1|NCBP2_DROYA RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|194182239|gb|EDW95850.1| GE25514 [Drosophila yakuba]
Length = 154
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 72/77 (93%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
+S SVELSSYRDQHFKGSR+EQE+ LR + TLYVGNLS+YTTEEQ++ELFS+CGD++ I+
Sbjct: 1 MSASVELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|194743814|ref|XP_001954395.1| GF16759 [Drosophila ananassae]
gi|259511300|sp|B3LYP1.1|NCBP2_DROAN RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|190627432|gb|EDV42956.1| GF16759 [Drosophila ananassae]
Length = 154
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 73/77 (94%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
+S SV+LSSYRDQHFKGSR+EQE+ LR ++TLYVGNLS+YTTEEQ++ELFS+CGD++ I+
Sbjct: 1 MSTSVDLSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRVIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|442746885|gb|JAA65602.1| Putative nuclear cap-binding protein complex subunit cbp20 rrm
superfamily [Ixodes ricinus]
Length = 152
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 72/74 (97%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
SV+LSSYRDQHFKGSR+EQE+LLR ++TLYVGN+S+YTTEEQ+YELFSKCGD+K++IMGL
Sbjct: 2 SVDLSSYRDQHFKGSRSEQERLLRLSTTLYVGNMSFYTTEEQIYELFSKCGDVKKVIMGL 61
Query: 68 DKYKKTPCGFCFLE 81
D++ KTPCGFCF+E
Sbjct: 62 DRFHKTPCGFCFVE 75
>gi|405972529|gb|EKC37293.1| Nuclear cap-binding protein subunit 2 [Crassostrea gigas]
Length = 162
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 69/76 (90%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
S SV LS+YRDQHFKGSR EQEK L T+STLYVGNLSYYTTEEQ++ELF KCGDIKRI+M
Sbjct: 10 SGSVALSAYRDQHFKGSRTEQEKALLTSSTLYVGNLSYYTTEEQIHELFGKCGDIKRIVM 69
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK KKTPCGFCF+E
Sbjct: 70 GLDKVKKTPCGFCFVE 85
>gi|427786559|gb|JAA58731.1| Putative cap binding protein 20 [Rhipicephalus pulchellus]
Length = 152
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 71/74 (95%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
+ +LSSYRDQHFKGSRAEQE+LLR +STLY+GN+S+YTTEEQ+YELFSKCGD+K++IMGL
Sbjct: 2 TADLSSYRDQHFKGSRAEQERLLRLSSTLYIGNMSFYTTEEQIYELFSKCGDVKKVIMGL 61
Query: 68 DKYKKTPCGFCFLE 81
D++ KTPCGFCF+E
Sbjct: 62 DRFHKTPCGFCFVE 75
>gi|195055430|ref|XP_001994622.1| GH15101 [Drosophila grimshawi]
gi|259511490|sp|B4JUT1.1|NCBP2_DROGR RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|193892385|gb|EDV91251.1| GH15101 [Drosophila grimshawi]
Length = 154
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 73/77 (94%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
++ SV+LSSYRDQHFKGSR+EQE+ LR ++TLYVGNLS+YTTEEQ++ELFS+CGD++ I+
Sbjct: 1 MTASVDLSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRIIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|195389827|ref|XP_002053575.1| GJ23276 [Drosophila virilis]
gi|259511298|sp|B4LZ88.1|NCB2B_DROVI RecName: Full=Nuclear cap-binding protein subunit 2B; AltName:
Full=20 kDa nuclear cap-binding protein B; AltName:
Full=NCBP 20 kDa subunit B; Short=CBP20-B
gi|194151661|gb|EDW67095.1| GJ23276 [Drosophila virilis]
Length = 154
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 73/77 (94%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
++ S++LSSYRDQHFKGSR+EQE+ LR ++TLYVGNLS+YTTEEQ++ELFS+CGD++ I+
Sbjct: 1 MTASIDLSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRIIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|383850397|ref|XP_003700782.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Megachile
rotundata]
Length = 166
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/68 (86%), Positives = 67/68 (98%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRDQHFKGSRAEQ++LLR ++TLYVGNLS+YTTEEQ+YELFSKCGDI+RIIMGLDKYKKT
Sbjct: 19 YRDQHFKGSRAEQDRLLRNSTTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDKYKKT 78
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 79 PCGFCFVE 86
>gi|17738031|ref|NP_524396.1| cap binding protein 20 [Drosophila melanogaster]
gi|195348959|ref|XP_002041014.1| GM15280 [Drosophila sechellia]
gi|195570001|ref|XP_002102997.1| GD19204 [Drosophila simulans]
gi|75026230|sp|Q9V3L6.1|NCBP2_DROME RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|259511687|sp|B4IBA4.1|NCBP2_DROSE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|259511688|sp|B4QV17.1|NCBP2_DROSI RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|5763573|emb|CAB53185.1| cap binding protein 20 [Drosophila melanogaster]
gi|7300337|gb|AAF55496.1| cap binding protein 20 [Drosophila melanogaster]
gi|17944312|gb|AAL48049.1| RE12122p [Drosophila melanogaster]
gi|194122619|gb|EDW44662.1| GM15280 [Drosophila sechellia]
gi|194198924|gb|EDX12500.1| GD19204 [Drosophila simulans]
gi|220947948|gb|ACL86517.1| Cbp20-PA [synthetic construct]
gi|220957182|gb|ACL91134.1| Cbp20-PA [synthetic construct]
Length = 154
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 70/75 (93%)
Query: 7 PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMG 66
SVELSSYRDQHFKGSR+EQE+ LR + TLYVGNLS+YTTEEQ++ELFS+CGD++ I+MG
Sbjct: 3 ASVELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMG 62
Query: 67 LDKYKKTPCGFCFLE 81
LDKYKKTPCGFCF+E
Sbjct: 63 LDKYKKTPCGFCFVE 77
>gi|195444793|ref|XP_002070032.1| GK11244 [Drosophila willistoni]
gi|259511689|sp|B4NB54.1|NCBP2_DROWI RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|194166117|gb|EDW81018.1| GK11244 [Drosophila willistoni]
Length = 154
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 72/77 (93%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
+S SVELSSYRDQHFKGSR+EQE+ L+ + TLYVGNLS+YTTEEQ++ELFS+CGD++ I+
Sbjct: 1 MSNSVELSSYRDQHFKGSRSEQERSLKESCTLYVGNLSFYTTEEQIHELFSRCGDVRLIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|125778396|ref|XP_001359956.1| GA11577 [Drosophila pseudoobscura pseudoobscura]
gi|195157832|ref|XP_002019798.1| GL12592 [Drosophila persimilis]
gi|122109500|sp|Q293V6.1|NCBP2_DROPS RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|259511686|sp|B4GLK8.1|NCBP2_DROPE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|54639706|gb|EAL29108.1| GA11577 [Drosophila pseudoobscura pseudoobscura]
gi|194116389|gb|EDW38432.1| GL12592 [Drosophila persimilis]
Length = 154
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 72/77 (93%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
++ SVELSSYRDQHFKGSR+EQE+ L+ + TLYVGNLS+YTTEEQ++ELFS+CGD++ I+
Sbjct: 1 MATSVELSSYRDQHFKGSRSEQERSLKDSCTLYVGNLSFYTTEEQIHELFSRCGDVRLIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|195393734|ref|XP_002055508.1| GJ18756 [Drosophila virilis]
gi|259511297|sp|B4M205.1|NCB2A_DROVI RecName: Full=Nuclear cap-binding protein subunit 2-A; AltName:
Full=20 kDa nuclear cap-binding protein A; AltName:
Full=NCBP 20 kDa subunit A; Short=CBP20-A
gi|194150018|gb|EDW65709.1| GJ18756 [Drosophila virilis]
Length = 154
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 71/77 (92%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
++ S+ELSSYRDQH+KGSR EQE+ LR +STLYVGNLS+YT EEQ++ELFS+CGD++ I+
Sbjct: 1 MTTSIELSSYRDQHYKGSRFEQERSLRDSSTLYVGNLSFYTAEEQIHELFSRCGDVRMIV 60
Query: 65 MGLDKYKKTPCGFCFLE 81
MGLDKYKKTPCGFCF+E
Sbjct: 61 MGLDKYKKTPCGFCFVE 77
>gi|345489693|ref|XP_001600470.2| PREDICTED: nuclear cap-binding protein subunit 2-like [Nasonia
vitripennis]
Length = 174
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 75/79 (94%)
Query: 3 TVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKR 62
+ SP + LS+YRDQ+FKGS+++Q++LL+T++TLYVGNLS+YTTE+Q+YE+FSKCGDIKR
Sbjct: 6 NIESPLLVLSAYRDQYFKGSQSKQDELLKTSTTLYVGNLSFYTTEQQVYEVFSKCGDIKR 65
Query: 63 IIMGLDKYKKTPCGFCFLE 81
IIMGLDKYKKTPCGFCF+E
Sbjct: 66 IIMGLDKYKKTPCGFCFVE 84
>gi|344313239|gb|AEN04479.1| putative nuclear cap-binding protein subunit 2 [Plutella
xylostella]
Length = 158
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 66/68 (97%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRDQHFKGSR EQ+KLLR +STLY+GNLS+YTTEEQ+YELFSKCGD++R+IMGLDKYKKT
Sbjct: 17 YRDQHFKGSRNEQDKLLRVSSTLYIGNLSFYTTEEQIYELFSKCGDLRRVIMGLDKYKKT 76
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 77 PCGFCFVE 84
>gi|240849186|ref|NP_001155469.1| nuclear cap-binding protein subunit 2-like [Acyrthosiphon pisum]
gi|239790309|dbj|BAH71724.1| ACYPI002210 [Acyrthosiphon pisum]
Length = 159
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 69/72 (95%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++SSYRDQHFKGSR E +K+LR+++T+Y+GNL++YTTE Q+YELFSKCGDIKRI+MGLDK
Sbjct: 3 DISSYRDQHFKGSRGELDKMLRSSTTMYIGNLAFYTTEGQIYELFSKCGDIKRIVMGLDK 62
Query: 70 YKKTPCGFCFLE 81
+KKTPCGFCF+E
Sbjct: 63 FKKTPCGFCFIE 74
>gi|313233270|emb|CBY24385.1| unnamed protein product [Oikopleura dioica]
Length = 202
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 68/76 (89%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
PSVE+S+YRD FKG+R EQ++LL T+STLYVGNLS+YTTEEQL +LF KCGD+KR+IM
Sbjct: 26 DPSVEVSAYRDNQFKGTRKEQDRLLHTSSTLYVGNLSFYTTEEQLTDLFGKCGDLKRVIM 85
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK K+TPCGFCF+E
Sbjct: 86 GLDKVKRTPCGFCFVE 101
>gi|240848909|ref|NP_001155582.1| nuclear cap-binding protein subunit 2-like [Acyrthosiphon pisum]
gi|239793400|dbj|BAH72824.1| ACYPI004714 [Acyrthosiphon pisum]
Length = 159
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 68/73 (93%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
++SSYRDQHFKGSR E +K+LR ++T+Y+GNL++YTTE Q+YELFSKCGDIKRI+MGLD
Sbjct: 2 TDVSSYRDQHFKGSRGELDKILRLSTTIYIGNLAFYTTEGQIYELFSKCGDIKRIVMGLD 61
Query: 69 KYKKTPCGFCFLE 81
K+KKTPCGFCF+E
Sbjct: 62 KFKKTPCGFCFIE 74
>gi|291242692|ref|XP_002741239.1| PREDICTED: cap binding protein 20-like [Saccoglossus kowalevskii]
Length = 172
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 71/87 (81%), Gaps = 6/87 (6%)
Query: 1 MTTVISPS------VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELF 54
M + SP VEL+SYRDQHFKG+ EQE L T+STLY+GNLS+YTTEEQ++ELF
Sbjct: 1 MANLTSPVQLTDRMVELTSYRDQHFKGTLTEQEYRLSTSSTLYLGNLSFYTTEEQIHELF 60
Query: 55 SKCGDIKRIIMGLDKYKKTPCGFCFLE 81
SKCGD+KRIIMGLDK KKTPCGFCF+E
Sbjct: 61 SKCGDLKRIIMGLDKVKKTPCGFCFVE 87
>gi|432855134|ref|XP_004068089.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Oryzias
latipes]
Length = 164
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 68/73 (93%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+E+S YRDQHFKG+R EQEKLL+ ++TLYVGNLS+YTTEEQ++ELF+KCGD+KRII+GLD
Sbjct: 14 IEVSQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFAKCGDVKRIIIGLD 73
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 74 KVKKTACGFCFVE 86
>gi|53733381|gb|AAH83529.1| Ncbp2 protein [Danio rerio]
Length = 155
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 1 MTTVISPS-VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD 59
+ + S S V++S YRDQHFKG+R EQEKLL+ ++TLYVGNLS+YTTEEQ++ELF+KCGD
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQSATLYVGNLSFYTTEEQVHELFAKCGD 64
Query: 60 IKRIIMGLDKYKKTPCGFCFLE 81
+KRII+GLDK KKT CGFCF+E
Sbjct: 65 VKRIIIGLDKIKKTACGFCFVE 86
>gi|443695441|gb|ELT96352.1| hypothetical protein CAPTEDRAFT_149941 [Capitella teleta]
Length = 154
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 68/76 (89%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
S + LS+YRDQHF+G+R EQEK L T++TLY+GNLS++T EEQ++ELFS+ GD+KRIIM
Sbjct: 7 SGAAALSAYRDQHFRGNRIEQEKALLTSTTLYIGNLSFFTAEEQIHELFSRAGDVKRIIM 66
Query: 66 GLDKYKKTPCGFCFLE 81
GLDKY+KTPCGFCF+E
Sbjct: 67 GLDKYRKTPCGFCFVE 82
>gi|259511469|sp|Q8JGR6.2|NCBP2_DANRE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
Length = 155
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 1 MTTVISPS-VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD 59
+ + S S V++S YRDQHFKG+R EQEKLL+ ++TLYVGNLS+YTTEEQ++ELF+KCGD
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQSATLYVGNLSFYTTEEQVHELFAKCGD 64
Query: 60 IKRIIMGLDKYKKTPCGFCFLE 81
+KRII+GLDK KKT CGFCF+E
Sbjct: 65 VKRIIIGLDKIKKTACGFCFVE 86
>gi|260817124|ref|XP_002603437.1| hypothetical protein BRAFLDRAFT_158723 [Branchiostoma floridae]
gi|229288756|gb|EEN59448.1| hypothetical protein BRAFLDRAFT_158723 [Branchiostoma floridae]
Length = 140
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 67/76 (88%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
P+ EL +YRDQH+KGSR +QE+ L ++TLYVGNLS+YTTEEQ+YELF KCGDIKRIIM
Sbjct: 1 DPAKELGAYRDQHYKGSRTDQERRLLESTTLYVGNLSFYTTEEQIYELFGKCGDIKRIIM 60
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK ++TPCGFCF+E
Sbjct: 61 GLDKMQRTPCGFCFVE 76
>gi|259511691|sp|C1BY64.1|NCBP2_ESOLU RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|225716242|gb|ACO13967.1| Nuclear cap-binding protein subunit 2 [Esox lucius]
Length = 155
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 67/73 (91%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
V++S YRDQHFKG+R EQEKLL+ ++TLYVGNLS+YTTEEQ+YELFSK GD+KRII+GLD
Sbjct: 14 VDVSQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVYELFSKSGDVKRIIIGLD 73
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 74 KVKKTACGFCFVE 86
>gi|350537317|ref|NP_001232044.1| nuclear cap-binding protein subunit 2 [Taeniopygia guttata]
gi|259511696|sp|B5G279.1|NCBP2_TAEGU RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|197128892|gb|ACH45390.1| putative nuclear cap binding protein subunit 2 variant 1
[Taeniopygia guttata]
Length = 168
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 65/72 (90%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+S YRDQHF+GSR QEK L+ +STLYVGNLS+YTTEEQ+ ELFSKCGD+KRI+MGLDK
Sbjct: 19 EISQYRDQHFRGSRQLQEKSLKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDK 78
Query: 70 YKKTPCGFCFLE 81
KKTPCGFCF+E
Sbjct: 79 IKKTPCGFCFVE 90
>gi|259511694|sp|C0H859.1|NCBP2_SALSA RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|223646940|gb|ACN10228.1| Nuclear cap-binding protein subunit 2 [Salmo salar]
gi|223672803|gb|ACN12583.1| Nuclear cap-binding protein subunit 2 [Salmo salar]
Length = 155
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query: 1 MTTVISPS-VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD 59
+ + S S V++S YRDQHFKG+R EQEKLL+ +TLYVGNLS+YTTEEQ+YELFSK GD
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFSKSGD 64
Query: 60 IKRIIMGLDKYKKTPCGFCFLE 81
+KRII+GLDK KKT CGFCF+E
Sbjct: 65 VKRIIIGLDKVKKTACGFCFVE 86
>gi|197632247|gb|ACH70847.1| nuclear cap binding protein subunit 2 [Salmo salar]
Length = 155
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query: 1 MTTVISPS-VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD 59
+ + S S V++S YRDQHFKG+R EQEKLL+ +TLYVGNLS+YTTEEQ+YELFSK GD
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFSKSGD 64
Query: 60 IKRIIMGLDKYKKTPCGFCFLE 81
+KRII+GLDK KKT CGFCF+E
Sbjct: 65 VKRIIIGLDKVKKTACGFCFVE 86
>gi|213511937|ref|NP_001134802.1| nuclear cap-binding protein subunit 2 [Salmo salar]
gi|209736168|gb|ACI68953.1| Nuclear cap-binding protein subunit 2 [Salmo salar]
Length = 153
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query: 1 MTTVISPS-VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD 59
+ + S S V++S YRDQHFKG+R EQEKLL+ +TLYVGNLS+YTTEEQ+YELFSK GD
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFSKSGD 64
Query: 60 IKRIIMGLDKYKKTPCGFCFLE 81
+KRII+GLDK KKT CGFCF+E
Sbjct: 65 VKRIIIGLDKVKKTACGFCFVE 86
>gi|449678922|ref|XP_002166119.2| PREDICTED: nuclear cap-binding protein subunit 2-like [Hydra
magnipapillata]
Length = 169
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 67/74 (90%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
+ LS+YRDQHFKG+RAE E+ L T++TLYVGNLS+YT+EEQ+YELFSK GD+KRIIMGL
Sbjct: 11 AAGLSAYRDQHFKGTRAELERKLETSTTLYVGNLSFYTSEEQIYELFSKSGDVKRIIMGL 70
Query: 68 DKYKKTPCGFCFLE 81
D+ KKTPCGFCF+E
Sbjct: 71 DRVKKTPCGFCFVE 84
>gi|290462351|gb|ADD24223.1| Nuclear cap-binding protein subunit 2 [Lepeophtheirus salmonis]
Length = 163
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 64/68 (94%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRDQHFKGSR +QEKLL+ ++TLYVGNLS++TTE QLYELF KCGDIKRI+MGLDK+K+T
Sbjct: 19 YRDQHFKGSRGDQEKLLKLSTTLYVGNLSFFTTEGQLYELFGKCGDIKRIVMGLDKFKRT 78
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 79 PCGFCFVE 86
>gi|225712302|gb|ACO11997.1| Nuclear cap-binding protein subunit 2 [Lepeophtheirus salmonis]
gi|290561879|gb|ADD38337.1| Nuclear cap-binding protein subunit 2 [Lepeophtheirus salmonis]
Length = 161
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 64/68 (94%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRDQHFKGSR +QEKLL+ ++TLYVGNLS++TTE QLYELF KCGDIKRI+MGLDK+K+T
Sbjct: 17 YRDQHFKGSRGDQEKLLKLSTTLYVGNLSFFTTEGQLYELFGKCGDIKRIVMGLDKFKRT 76
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 77 PCGFCFVE 84
>gi|225718120|gb|ACO14906.1| Nuclear cap-binding protein subunit 2 [Caligus clemensi]
gi|225718372|gb|ACO15032.1| Nuclear cap-binding protein subunit 2 [Caligus clemensi]
Length = 161
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 64/68 (94%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRDQHFKGSR EQEKLL+ ++TLYVGNLS++TTE QLYELF KCGD+KRI+MGLDK+K+T
Sbjct: 17 YRDQHFKGSRNEQEKLLKHSTTLYVGNLSFFTTEGQLYELFGKCGDVKRIVMGLDKFKRT 76
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 77 PCGFCFVE 84
>gi|221120107|ref|XP_002160076.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Hydra
magnipapillata]
Length = 160
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 67/74 (90%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
+ LS+YRDQHFKG+RA+ EK L T++TLYVGNLS+YT+EEQ+YELFSK GDIKRIIMGL
Sbjct: 2 AAGLSAYRDQHFKGTRADLEKKLETSTTLYVGNLSFYTSEEQIYELFSKSGDIKRIIMGL 61
Query: 68 DKYKKTPCGFCFLE 81
D+ KKTPCGFCF+E
Sbjct: 62 DRIKKTPCGFCFVE 75
>gi|148665345|gb|EDK97761.1| nuclear cap binding protein subunit 2, isoform CRA_b [Mus
musculus]
Length = 200
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|57530195|ref|NP_001006430.1| nuclear cap-binding protein subunit 2 [Gallus gallus]
gi|82233852|sp|Q5ZKR5.1|NCBP2_CHICK RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|53130698|emb|CAG31678.1| hypothetical protein RCJMB04_9i16 [Gallus gallus]
Length = 168
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 65/72 (90%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+S YRDQHF+GS+ QEK L+ +STLYVGNLS+YTTEEQ+ ELFSKCGD+KRI+MGLDK
Sbjct: 19 EISRYRDQHFRGSKKLQEKFLKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDK 78
Query: 70 YKKTPCGFCFLE 81
KKTPCGFCF+E
Sbjct: 79 IKKTPCGFCFVE 90
>gi|321455647|gb|EFX66775.1| hypothetical protein DAPPUDRAFT_231808 [Daphnia pulex]
Length = 152
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 64/70 (91%)
Query: 12 SSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
S+YRDQHFKGSR EQE+LL + TLYVGNLS++TTEEQ++ELF KCGD+KRIIMGLDK+
Sbjct: 5 STYRDQHFKGSRVEQERLLSQSCTLYVGNLSFFTTEEQIHELFGKCGDVKRIIMGLDKFT 64
Query: 72 KTPCGFCFLE 81
+TPCGFCF+E
Sbjct: 65 RTPCGFCFVE 74
>gi|432118147|gb|ELK38032.1| Nuclear cap-binding protein subunit 2 [Myotis davidii]
Length = 156
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|194382258|dbj|BAG58884.1| unnamed protein product [Homo sapiens]
Length = 121
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|30583899|gb|AAP36198.1| Homo sapiens nuclear cap binding protein subunit 2, 20kDa
[synthetic construct]
gi|61371311|gb|AAX43646.1| nuclear cap binding protein subunit 2 [synthetic construct]
Length = 157
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|351694922|gb|EHA97840.1| Nuclear cap-binding protein subunit 2 [Heterocephalus glaber]
Length = 156
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|19923387|ref|NP_031388.2| nuclear cap-binding protein subunit 2 isoform 1 [Homo sapiens]
gi|77735739|ref|NP_001029568.1| nuclear cap-binding protein subunit 2 [Bos taurus]
gi|388453641|ref|NP_001252776.1| nuclear cap-binding protein subunit 2 [Macaca mulatta]
gi|57109606|ref|XP_535779.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2 [Canis
lupus familiaris]
gi|114591287|ref|XP_516977.2| PREDICTED: nuclear cap-binding protein subunit 2 isoform 3 [Pan
troglodytes]
gi|149731241|ref|XP_001501058.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Equus
caballus]
gi|296224920|ref|XP_002758268.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1
[Callithrix jacchus]
gi|297672879|ref|XP_002814513.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Pongo
abelii]
gi|301762732|ref|XP_002916818.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Ailuropoda
melanoleuca]
gi|350591869|ref|XP_003358812.2| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Sus
scrofa]
gi|395839708|ref|XP_003792724.1| PREDICTED: nuclear cap-binding protein subunit 2 [Otolemur
garnettii]
gi|397469680|ref|XP_003806473.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Pan
paniscus]
gi|410970681|ref|XP_003991806.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Felis
catus]
gi|426217648|ref|XP_004003065.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Ovis
aries]
gi|441633497|ref|XP_004089763.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2
[Nomascus leucogenys]
gi|1705651|sp|P52298.1|NCBP2_HUMAN RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=Cell proliferation-inducing gene 55 protein;
AltName: Full=NCBP 20 kDa subunit; Short=CBP20;
AltName: Full=NCBP-interacting protein 1; Short=NIP1
gi|93140455|sp|Q3ZBJ1.1|NCBP2_BOVIN RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|24987331|pdb|1H2T|Z Chain Z, Structure Of The Human Nuclear Cap-Binding-Complex (Cbc)
In Complex With A Cap Analogue M7gpppg
gi|24987334|pdb|1H2U|X Chain X, Structure Of The Human Nuclear Cap-Binding-Complex (Cbc)
In Complex With A Cap Analogue M7gpppg
gi|24987335|pdb|1H2U|Y Chain Y, Structure Of The Human Nuclear Cap-Binding-Complex (Cbc)
In Complex With A Cap Analogue M7gpppg
gi|24987337|pdb|1H2V|Z Chain Z, Structure Of The Human Nuclear Cap-Binding-Complex (Cbc)
gi|28948730|pdb|1N52|B Chain B, Cap Binding Complex
gi|28948732|pdb|1N54|B Chain B, Cap Binding Complex M7gpppg Free
gi|255917904|pdb|3FEX|B Chain B, Crystal Structure Of The Cbc-Importin Alpha Complex.
gi|255917907|pdb|3FEY|B Chain B, Crystal Structure Of The Cbc-Importin Alpha Complex.
gi|984139|emb|CAA58962.1| subunit of the dimeric cap binding complex CBC [Homo sapiens]
gi|12654825|gb|AAH01255.1| Nuclear cap binding protein subunit 2, 20kDa [Homo sapiens]
gi|30582523|gb|AAP35488.1| nuclear cap binding protein subunit 2, 20kDa [Homo sapiens]
gi|56267986|gb|AAV85455.1| cell proliferation-inducing gene 55 [Homo sapiens]
gi|60654827|gb|AAX31978.1| nuclear cap binding protein subunit 2 [synthetic construct]
gi|73586797|gb|AAI03268.1| Nuclear cap binding protein subunit 2, 20kDa [Bos taurus]
gi|119574009|gb|EAW53624.1| nuclear cap binding protein subunit 2, 20kDa, isoform CRA_d [Homo
sapiens]
gi|123979600|gb|ABM81629.1| nuclear cap binding protein subunit 2, 20kDa [synthetic
construct]
gi|123994423|gb|ABM84813.1| nuclear cap binding protein subunit 2, 20kDa [synthetic
construct]
gi|189067583|dbj|BAG38188.1| unnamed protein product [Homo sapiens]
gi|261861032|dbj|BAI47038.1| nuclear cap binding protein subunit 2, 20kDa [synthetic
construct]
gi|296491293|tpg|DAA33356.1| TPA: nuclear cap-binding protein subunit 2 [Bos taurus]
gi|355560151|gb|EHH16879.1| hypothetical protein EGK_12250 [Macaca mulatta]
gi|380783325|gb|AFE63538.1| nuclear cap-binding protein subunit 2 isoform 1 [Macaca mulatta]
gi|383413327|gb|AFH29877.1| nuclear cap-binding protein subunit 2 isoform 1 [Macaca mulatta]
gi|384944072|gb|AFI35641.1| nuclear cap-binding protein subunit 2 isoform 1 [Macaca mulatta]
gi|410211392|gb|JAA02915.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410211394|gb|JAA02916.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410262784|gb|JAA19358.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410302104|gb|JAA29652.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334569|gb|JAA36231.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334571|gb|JAA36232.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334573|gb|JAA36233.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334575|gb|JAA36234.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334577|gb|JAA36235.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|440904397|gb|ELR54920.1| Nuclear cap-binding protein subunit 2 [Bos grunniens mutus]
gi|444709950|gb|ELW50945.1| Nuclear cap-binding protein subunit 2 [Tupaia chinensis]
gi|1582342|prf||2118330A cap-binding protein
Length = 156
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|1060899|dbj|BAA09599.1| NCBP interacting protein 1 [Homo sapiens]
Length = 156
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|291400455|ref|XP_002716573.1| PREDICTED: nuclear cap binding protein subunit 2, 20kDa isoform 1
[Oryctolagus cuniculus]
Length = 156
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KVKKTACGFCFVE 87
>gi|13386056|ref|NP_080830.1| nuclear cap-binding protein subunit 2 [Mus musculus]
gi|157817217|ref|NP_001102995.1| nuclear cap-binding protein subunit 2 [Rattus norvegicus]
gi|354465948|ref|XP_003495438.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cricetulus
griseus]
gi|392352130|ref|XP_003751123.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Rattus
norvegicus]
gi|46395967|sp|Q9CQ49.1|NCBP2_MOUSE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|259511693|sp|B1WC40.1|NCBP2_RAT RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|12843496|dbj|BAB26004.1| unnamed protein product [Mus musculus]
gi|12849552|dbj|BAB28389.1| unnamed protein product [Mus musculus]
gi|26346763|dbj|BAC37030.1| unnamed protein product [Mus musculus]
gi|74150972|dbj|BAE27620.1| unnamed protein product [Mus musculus]
gi|111599293|gb|AAI18927.1| Nuclear cap binding protein subunit 2 [Mus musculus]
gi|148665344|gb|EDK97760.1| nuclear cap binding protein subunit 2, isoform CRA_a [Mus
musculus]
gi|149060738|gb|EDM11452.1| rCG52909, isoform CRA_b [Rattus norvegicus]
gi|171847096|gb|AAI61994.1| Similar to nuclear cap binding protein subunit 2 [Rattus
norvegicus]
gi|344240263|gb|EGV96366.1| Nuclear cap-binding protein subunit 2 [Cricetulus griseus]
Length = 156
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|281338661|gb|EFB14245.1| hypothetical protein PANDA_004893 [Ailuropoda melanoleuca]
Length = 134
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|355706568|gb|AES02677.1| nuclear cap binding protein subunit 2, 20kDa [Mustela putorius
furo]
Length = 154
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|344282445|ref|XP_003412984.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Loxodonta africana]
Length = 156
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|348582770|ref|XP_003477149.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cavia
porcellus]
Length = 156
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|119574006|gb|EAW53621.1| nuclear cap binding protein subunit 2, 20kDa, isoform CRA_b [Homo
sapiens]
Length = 172
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|348543047|ref|XP_003458995.1| PREDICTED: nuclear cap-binding protein subunit 2-like
[Oreochromis niloticus]
Length = 164
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 67/73 (91%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+++S YRDQHFKG+R EQEKLL+ ++TLYVGNLS+YTTEEQ++ELFSK GD+KRII+GLD
Sbjct: 14 IDISQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLD 73
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 74 KIKKTACGFCFVE 86
>gi|225717612|gb|ACO14652.1| Nuclear cap-binding protein subunit 2 [Caligus clemensi]
Length = 161
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 63/68 (92%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRDQHFKGSR EQEKLL+ ++TLYVGNLS++TTE QLYELF KCGD+KR +MGLDK+K+T
Sbjct: 17 YRDQHFKGSRNEQEKLLKHSTTLYVGNLSFFTTEGQLYELFGKCGDVKRFVMGLDKFKRT 76
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 77 PCGFCFVE 84
>gi|27545255|ref|NP_775356.1| nuclear cap-binding protein subunit 2 [Danio rerio]
gi|20977581|gb|AAM28218.1| nuclear cap binding protein subunit 2 [Danio rerio]
Length = 155
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 67/73 (91%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
V++S YRDQHFKG+R EQEKLL+ ++TLYVGNLS+YTTEEQ++ LF+KCGD+KRII+GLD
Sbjct: 14 VDVSQYRDQHFKGNRYEQEKLLKQSATLYVGNLSFYTTEEQVHVLFAKCGDVKRIIIGLD 73
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 74 KIKKTACGFCFVE 86
>gi|31873246|emb|CAD97614.1| hypothetical protein [Homo sapiens]
Length = 119
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 34 VELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 93
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 94 KMKKTACGFCFVE 106
>gi|149060737|gb|EDM11451.1| rCG52909, isoform CRA_a [Rattus norvegicus]
Length = 173
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|355747180|gb|EHH51794.1| hypothetical protein EGM_11239 [Macaca fascicularis]
Length = 156
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQH++G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELSQYRDQHWRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KMKKTACGFCFVE 87
>gi|291290891|ref|NP_001167476.1| nuclear cap binding protein subunit 2, 20kDa [Xenopus laevis]
gi|259016297|sp|P52299.2|NCBP2_XENLA RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|49117075|gb|AAH72902.1| Unknown (protein for MGC:80352) [Xenopus laevis]
Length = 153
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 66/73 (90%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
V+LS YRDQHF+G+R++QE LL+ + TLYVGNLS+YTTEEQ++ELFSK GD+KRI+MGLD
Sbjct: 12 VDLSQYRDQHFRGNRSDQESLLKQSCTLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLD 71
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 72 KVKKTACGFCFVE 84
>gi|291401398|ref|XP_002717013.1| PREDICTED: nuclear cap binding protein subunit 2, 20kDa isoform 1
[Oryctolagus cuniculus]
Length = 156
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 64/76 (84%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
VELS YRDQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YEL+SK GDIK+IIM
Sbjct: 12 DSHVELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELYSKSGDIKKIIM 71
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK KKT CGFCF+E
Sbjct: 72 GLDKVKKTACGFCFVE 87
>gi|984260|emb|CAA59259.1| CAP binding protein [Xenopus laevis]
gi|1582343|prf||2118330B cap-binding protein
Length = 148
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 66/73 (90%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
V+LS YRDQHF+G+R++QE LL+ + TLYVGNLS+YTTEEQ++ELFSK GD+KRI+MGLD
Sbjct: 7 VDLSQYRDQHFRGNRSDQESLLKQSCTLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLD 66
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 67 KVKKTACGFCFVE 79
>gi|47211818|emb|CAF95006.1| unnamed protein product [Tetraodon nigroviridis]
Length = 154
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 66/73 (90%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+++S YRDQHFKG +EQEKLL+TT TLYVGNLS+YTTEEQ++ELFSK GD+KRII+GLD
Sbjct: 14 IDISQYRDQHFKGKCSEQEKLLKTTHTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLD 73
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 74 KVKKTACGFCFVE 86
>gi|259511695|sp|A2SW84.1|NCBP2_SINCH RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|86212470|gb|ABC87764.1| nuclear cap binding protein [Siniperca chuatsi]
Length = 165
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 66/73 (90%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+++S YRDQHFKG+R +QEKLL+ + TLYVGNLS+YTTEEQ++ELFSK GD+KRII+GLD
Sbjct: 14 IDVSQYRDQHFKGNRYDQEKLLKQSHTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLD 73
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 74 KVKKTACGFCFVE 86
>gi|410921882|ref|XP_003974412.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Takifugu
rubripes]
Length = 164
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 66/73 (90%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+++S YRDQHFKG +EQEKLL++T TLYVGNLS+YTTEEQ++ELFSK GD+KRII+GLD
Sbjct: 14 IDISQYRDQHFKGKCSEQEKLLKSTHTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLD 73
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 74 KVKKTACGFCFVE 86
>gi|229367868|gb|ACQ58914.1| Nuclear cap-binding protein subunit 2 [Anoplopoma fimbria]
Length = 123
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 71/82 (86%), Gaps = 1/82 (1%)
Query: 1 MTTVISPS-VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD 59
+ +IS S V++S YRDQHFKG+R +QEKLL+ + TLYVGNLS+Y+TE+Q++E+FSK GD
Sbjct: 5 LNALISDSYVDVSQYRDQHFKGNRYDQEKLLKQSHTLYVGNLSFYSTEDQVHEIFSKSGD 64
Query: 60 IKRIIMGLDKYKKTPCGFCFLE 81
+KRI++GLDK KKT CGFCF+E
Sbjct: 65 VKRIVIGLDKVKKTACGFCFVE 86
>gi|312071976|ref|XP_003138855.1| nuclear cap binding protein subunit 2 [Loa loa]
gi|307765978|gb|EFO25212.1| nuclear cap binding protein subunit 2 [Loa loa]
Length = 160
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 5/86 (5%)
Query: 1 MTTVIS-----PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFS 55
M++VI+ + L YRDQ FKGS EQEKLL + TLYVGNLSYYTTEEQ YELFS
Sbjct: 1 MSSVINFRAKDDASSLGPYRDQRFKGSLREQEKLLLNSKTLYVGNLSYYTTEEQTYELFS 60
Query: 56 KCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ GDIKRIIMG+D++KKTPCGFCF+E
Sbjct: 61 RAGDIKRIIMGIDRFKKTPCGFCFVE 86
>gi|363737175|ref|XP_422700.3| PREDICTED: nuclear cap-binding protein subunit 2 [Gallus gallus]
Length = 159
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 65/73 (89%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
V+LS YRDQHF+G+R +QE+LLR + TLYVGNLS+YTTEEQ++ELF K GDIK+IIMGLD
Sbjct: 16 VDLSQYRDQHFRGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFGKSGDIKKIIMGLD 75
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 76 KVKKTACGFCFVE 88
>gi|327288494|ref|XP_003228961.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Anolis
carolinensis]
Length = 168
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 65/72 (90%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+S YRDQ FKGSR Q+K L+++ TLYVGNLS+YTTEEQ++ELFSKCGD+KRI+MGLDK
Sbjct: 19 EISCYRDQQFKGSRYLQKKALKSSCTLYVGNLSFYTTEEQIHELFSKCGDVKRIVMGLDK 78
Query: 70 YKKTPCGFCFLE 81
KKTPCGFCF+E
Sbjct: 79 LKKTPCGFCFVE 90
>gi|170572372|ref|XP_001892082.1| nuclear cap binding protein subunit 2 [Brugia malayi]
gi|158602907|gb|EDP39101.1| nuclear cap binding protein subunit 2, putative [Brugia malayi]
Length = 160
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 5/86 (5%)
Query: 1 MTTVIS-----PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFS 55
M++VI+ + L YRDQ FKGS EQEKLL T+ TLYVGNLSYYTTEEQ YELFS
Sbjct: 1 MSSVINFRAKDDASSLGPYRDQRFKGSLREQEKLLLTSKTLYVGNLSYYTTEEQTYELFS 60
Query: 56 KCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ GDIKRIIMG+D++KK PCGFCF+E
Sbjct: 61 RAGDIKRIIMGIDRFKKIPCGFCFVE 86
>gi|224060489|ref|XP_002188900.1| PREDICTED: nuclear cap-binding protein subunit 2 [Taeniopygia
guttata]
Length = 157
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
ELS YRDQHF+G+R +QE+LLR + TLYVGNLS+YTTEEQ++ELF K GDIK++IMGLD
Sbjct: 16 AELSQYRDQHFRGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFGKSGDIKKVIMGLD 75
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 76 KVKKTACGFCFVE 88
>gi|55742232|ref|NP_001006879.1| nuclear cap-binding protein subunit 2 [Xenopus (Silurana)
tropicalis]
gi|82235814|sp|Q6DES0.1|NCBP2_XENTR RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|49903766|gb|AAH77024.1| nuclear cap binding protein subunit 2, 20kDa [Xenopus (Silurana)
tropicalis]
gi|89266769|emb|CAJ81729.1| nuclear cap binding protein subunit 2, 20kDa [Xenopus (Silurana)
tropicalis]
Length = 153
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 66/73 (90%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VELS YRDQHF+G+R++QE LL+ + TLYVGNLS+YTTEEQ++ELFSK GD+K+I+MGLD
Sbjct: 12 VELSQYRDQHFRGNRSDQECLLKHSCTLYVGNLSFYTTEEQIHELFSKSGDVKKIVMGLD 71
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 72 KIKKTACGFCFVE 84
>gi|126310731|ref|XP_001371322.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Monodelphis domestica]
gi|395535208|ref|XP_003769622.1| PREDICTED: nuclear cap-binding protein subunit 2-like
[Sarcophilus harrisii]
Length = 156
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 63/73 (86%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VEL YRDQHF+G +QEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELGWYRDQHFRGKMDDQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KVKKTACGFCFVE 87
>gi|72067816|ref|XP_802051.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 165
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 63/72 (87%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
ELS+YRDQHF GS QE+ L+ STLY+GNLS++TTEEQ+YE+FSKCG IKR++MGLDK
Sbjct: 10 ELSAYRDQHFGGSMDNQERKLKEASTLYIGNLSFFTTEEQIYEVFSKCGSIKRVVMGLDK 69
Query: 70 YKKTPCGFCFLE 81
K+TPCGFCF+E
Sbjct: 70 IKRTPCGFCFVE 81
>gi|195995469|ref|XP_002107603.1| hypothetical protein TRIADDRAFT_19119 [Trichoplax adhaerens]
gi|190588379|gb|EDV28401.1| hypothetical protein TRIADDRAFT_19119 [Trichoplax adhaerens]
Length = 163
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 63/74 (85%)
Query: 7 PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMG 66
SV LS+YRDQ FKG+ EQE L+ T T+YVGNLS+YTTE QLYE+FSK GD+KRI+MG
Sbjct: 10 DSVSLSAYRDQQFKGTVTEQESKLKLTCTMYVGNLSFYTTESQLYEVFSKVGDVKRIVMG 69
Query: 67 LDKYKKTPCGFCFL 80
LD++KKTPCGFCFL
Sbjct: 70 LDRFKKTPCGFCFL 83
>gi|344286334|ref|XP_003414914.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Loxodonta
africana]
Length = 207
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 63/76 (82%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
++ELS YRDQ F G+ EQEKLL+ +STLYVGNLS+YTTE+Q+YELF +CGDIK + M
Sbjct: 56 DSALELSEYRDQQFNGNNDEQEKLLKESSTLYVGNLSFYTTEDQIYELFGRCGDIKNVFM 115
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK KKT CGFCF+E
Sbjct: 116 GLDKIKKTACGFCFVE 131
>gi|126338527|ref|XP_001373445.1| PREDICTED: nuclear cap-binding protein subunit 2-like
[Monodelphis domestica]
Length = 157
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
V+L YRDQHF+G + +QEKLL+ + TLYVGNLS+YTTEEQ+YELF K GDIK+I+MGLD
Sbjct: 15 VQLGQYRDQHFRGDKKDQEKLLQKSCTLYVGNLSFYTTEEQIYELFGKSGDIKKIVMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KVKKTACGFCFVE 87
>gi|312374367|gb|EFR21936.1| hypothetical protein AND_16009 [Anopheles darlingi]
Length = 622
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/63 (77%), Positives = 61/63 (96%)
Query: 19 FKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFC 78
F+GSR EQEKLLR ++TLYVGNLS+YTTEEQ++ELFS+CGD++RI+MGLDK+KKTPCGFC
Sbjct: 482 FEGSRHEQEKLLRLSATLYVGNLSFYTTEEQIHELFSRCGDVRRIVMGLDKFKKTPCGFC 541
Query: 79 FLE 81
F+E
Sbjct: 542 FVE 544
>gi|156380921|ref|XP_001632015.1| predicted protein [Nematostella vectensis]
gi|156219065|gb|EDO39952.1| predicted protein [Nematostella vectensis]
Length = 157
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 64/73 (87%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+LS+YRDQHF+G+R E E L T+STLYVGNLS+YT+E+Q+YELF + G++K+IIMGLD
Sbjct: 2 ADLSAYRDQHFRGTRQELESRLETSSTLYVGNLSFYTSEQQIYELFGRAGELKKIIMGLD 61
Query: 69 KYKKTPCGFCFLE 81
K +KTPCGFCF+E
Sbjct: 62 KVRKTPCGFCFVE 74
>gi|209489440|gb|ACI49201.1| hypothetical protein Csp3_JD03.010 [Caenorhabditis angaria]
Length = 361
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 64/72 (88%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++S+YRDQ ++GS +QE LRT++TLYVGNLSY+T E+Q+YELF + GD++R+IMGLD+
Sbjct: 13 DVSAYRDQRYQGSLRDQEIALRTSTTLYVGNLSYFTKEDQVYELFGRAGDVRRVIMGLDR 72
Query: 70 YKKTPCGFCFLE 81
+KKTPCGFCF+E
Sbjct: 73 FKKTPCGFCFVE 84
>gi|341880669|gb|EGT36604.1| CBN-NCBP-2 protein [Caenorhabditis brenneri]
Length = 157
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 63/72 (87%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++S+YRDQ ++GS +QE LRT+ TLYVGNLSYYT E+Q+YELF + GD++R+IMGLD+
Sbjct: 13 DISAYRDQRYQGSVRDQENALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDR 72
Query: 70 YKKTPCGFCFLE 81
+KKTPCGFCF+E
Sbjct: 73 FKKTPCGFCFVE 84
>gi|324533059|gb|ADY49280.1| Nuclear cap-binding protein subunit 2, partial [Ascaris suum]
Length = 185
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 63/74 (85%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
++ S YRDQ FKG+ EQ +LL +STLYVGNLSY+TTEEQ+YELFS+ G I+RIIMG+
Sbjct: 41 ALRHSDYRDQRFKGTSREQSRLLAVSSTLYVGNLSYFTTEEQVYELFSRAGRIRRIIMGI 100
Query: 68 DKYKKTPCGFCFLE 81
D++KKTPCGFCF+E
Sbjct: 101 DRFKKTPCGFCFVE 114
>gi|324521958|gb|ADY47964.1| Nuclear cap-binding protein subunit 2 [Ascaris suum]
Length = 157
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 63/74 (85%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
++ S YRDQ FKG+ EQ +LL +STLYVGNLSY+TTEEQ+YELFS+ G I+RIIMG+
Sbjct: 13 ALRHSDYRDQRFKGTSREQSRLLAVSSTLYVGNLSYFTTEEQVYELFSRAGRIRRIIMGI 72
Query: 68 DKYKKTPCGFCFLE 81
D++KKTPCGFCF+E
Sbjct: 73 DRFKKTPCGFCFVE 86
>gi|392886211|ref|NP_001250552.1| Protein NCBP-2, isoform a [Caenorhabditis elegans]
gi|408360164|sp|Q93594.2|NCBP2_CAEEL RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|345107386|emb|CCD31067.1| Protein NCBP-2, isoform a [Caenorhabditis elegans]
Length = 158
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 3 TVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKR 62
T+ +P E+S+YRDQ ++G+ +QE LRT+ TLYVGNLSYYT E+Q+YELF + GD++R
Sbjct: 7 TLDNPK-EISAYRDQRYQGTVRDQETALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRR 65
Query: 63 IIMGLDKYKKTPCGFCFLE 81
+IMGLD++KKTPCGFCF+E
Sbjct: 66 VIMGLDRFKKTPCGFCFVE 84
>gi|308476832|ref|XP_003100631.1| CRE-NCBP-2 protein [Caenorhabditis remanei]
gi|308264649|gb|EFP08602.1| CRE-NCBP-2 protein [Caenorhabditis remanei]
Length = 189
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 63/72 (87%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++S+YRDQ ++GS +QE LRT+ TLYVGNLSYYT E+Q+YELF + GD++R+IMGLD+
Sbjct: 13 DISAYRDQRYQGSVRDQEVALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDR 72
Query: 70 YKKTPCGFCFLE 81
+KKTPCGFCF+E
Sbjct: 73 FKKTPCGFCFVE 84
>gi|259511471|sp|A8Y1R8.2|NCBP2_CAEBR RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
Length = 157
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 63/72 (87%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++S+YRDQ ++GS +QE LRT+ TLYVGNLSYYT E+Q+YELF + GD++R+IMGLD+
Sbjct: 13 DISAYRDQRYQGSVRDQELALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDR 72
Query: 70 YKKTPCGFCFLE 81
+KKTPCGFCF+E
Sbjct: 73 FKKTPCGFCFVE 84
>gi|268563881|ref|XP_002638958.1| C. briggsae CBR-NCBP-2 protein [Caenorhabditis briggsae]
Length = 153
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 63/72 (87%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++S+YRDQ ++GS +QE LRT+ TLYVGNLSYYT E+Q+YELF + GD++R+IMGLD+
Sbjct: 13 DISAYRDQRYQGSVRDQELALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDR 72
Query: 70 YKKTPCGFCFLE 81
+KKTPCGFCF+E
Sbjct: 73 FKKTPCGFCFVE 84
>gi|126322009|ref|XP_001367568.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Monodelphis domestica]
gi|126322013|ref|XP_001367656.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Monodelphis domestica]
Length = 156
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 61/73 (83%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
VEL YRDQ F+G +QEKLL+ + TL VGNLS+YTTEEQ+YELFSK GDIK+IIMGLD
Sbjct: 15 VELGWYRDQQFRGKMEDQEKLLKKSCTLCVGNLSFYTTEEQIYELFSKSGDIKKIIMGLD 74
Query: 69 KYKKTPCGFCFLE 81
K KKT CGFCF+E
Sbjct: 75 KVKKTACGFCFVE 87
>gi|302814995|ref|XP_002989180.1| hypothetical protein SELMODRAFT_129288 [Selaginella
moellendorffii]
gi|300143080|gb|EFJ09774.1| hypothetical protein SELMODRAFT_129288 [Selaginella
moellendorffii]
Length = 159
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 65/80 (81%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + E+S+Y+D+ F G++ E E+ L+T+ T+YVGNLS+YTTEEQLYELFS+CG+I
Sbjct: 1 MIARAAQKKEISAYKDRRFAGTQVEYEEALQTSVTVYVGNLSFYTTEEQLYELFSRCGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
KRI+MGLDK KTPCGFCF+
Sbjct: 61 KRIVMGLDKNNKTPCGFCFI 80
>gi|302811225|ref|XP_002987302.1| hypothetical protein SELMODRAFT_125790 [Selaginella
moellendorffii]
gi|300144937|gb|EFJ11617.1| hypothetical protein SELMODRAFT_125790 [Selaginella
moellendorffii]
Length = 159
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 65/80 (81%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + E+S+Y+D+ F G++ E E+ L+T+ T+YVGNLS+YTTEEQLYELFS+CG+I
Sbjct: 1 MIARAAQKKEISAYKDRRFAGTQVEYEEALQTSVTVYVGNLSFYTTEEQLYELFSRCGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
KRI+MGLDK KTPCGFCF+
Sbjct: 61 KRIVMGLDKNNKTPCGFCFI 80
>gi|15241430|ref|NP_199233.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|145334719|ref|NP_001078705.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|75338554|sp|Q9XFD1.1|NCBP2_ARATH RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=AtCBP20
gi|4768968|gb|AAD29697.1|AF140219_1 nuclear cap-binding protein [Arabidopsis thaliana]
gi|9759521|dbj|BAB10987.1| nuclear cap-binding protein; CBP20 [Arabidopsis thaliana]
gi|28466941|gb|AAO44079.1| At5g44200 [Arabidopsis thaliana]
gi|110735694|dbj|BAE99827.1| nuclear cap-binding protein [Arabidopsis thaliana]
gi|332007690|gb|AED95073.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|332007691|gb|AED95074.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
Length = 257
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 65/80 (81%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ F G++ E ++ LR ++T+Y+GN+S+YTTEEQLYELFS+ G+I
Sbjct: 1 MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFV 80
>gi|359081817|ref|XP_003588184.1| PREDICTED: LOW QUALITY PROTEIN: nuclear cap-binding protein subunit
2-like [Bos taurus]
Length = 220
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 60/74 (81%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
S+ELS Y DQ F G EQE+LL +STLYVGNLS+YTT+EQ+YELFS+CGDI+ + MGL
Sbjct: 57 SLELSEYWDQKFSGDNDEQERLLMESSTLYVGNLSFYTTKEQIYELFSRCGDIENVYMGL 116
Query: 68 DKYKKTPCGFCFLE 81
DK KK CGFCF+E
Sbjct: 117 DKIKKMGCGFCFVE 130
>gi|444731186|gb|ELW71548.1| Nuclear cap-binding protein subunit 2 [Tupaia chinensis]
Length = 134
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 60/73 (82%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+ELS +R++HF+G EQEKLL+ + LYVGNLS+YTTEEQ+YEL SK GDIK+IIM LD
Sbjct: 15 MELSQFRNRHFRGDNEEQEKLLKESCMLYVGNLSFYTTEEQIYELLSKSGDIKKIIMDLD 74
Query: 69 KYKKTPCGFCFLE 81
K KK CGFCF+E
Sbjct: 75 KMKKIACGFCFVE 87
>gi|413937758|gb|AFW72309.1| hypothetical protein ZEAMMB73_547300, partial [Zea mays]
Length = 215
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ FKG++ E E L ++TLY+GN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEATLHASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|116791485|gb|ABK25999.1| unknown [Picea sitchensis]
Length = 235
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 64/80 (80%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
MTT+ +S+YRD+ F G++ E E LRT+ T+YVGNLS+YTTEEQ+YELFS+ G++
Sbjct: 1 MTTLFKDPTLISAYRDRRFNGTQEEFEHALRTSITVYVGNLSFYTTEEQVYELFSRAGEV 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K++IMGLDK KTPCGFCF+
Sbjct: 61 KKLIMGLDKNTKTPCGFCFV 80
>gi|440900334|gb|ELR51494.1| Nuclear cap-binding protein subunit 2, partial [Bos grunniens
mutus]
Length = 153
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 59/76 (77%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
S+ELS Y D F G EQE+LL +STLYVGNLS+YTT+EQ+YELFS+CGDI+ + M
Sbjct: 10 DSSLELSEYWDHKFSGDNDEQERLLMESSTLYVGNLSFYTTKEQIYELFSRCGDIENVYM 69
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK KK CGFCF+E
Sbjct: 70 GLDKIKKMGCGFCFVE 85
>gi|226492429|ref|NP_001147247.1| LOC100280855 [Zea mays]
gi|195609038|gb|ACG26349.1| nuclear cap-binding protein subunit 2 [Zea mays]
gi|219886131|gb|ACL53440.1| unknown [Zea mays]
gi|413923017|gb|AFW62949.1| nuclear cap-binding protein subunit 2 [Zea mays]
Length = 242
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ FKG++ E E L ++TLY+GN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|440792651|gb|ELR13860.1| RNA recognition domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 244
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 62/81 (76%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + + S+Y+D F+GS+ + + LL ++T YVGNLS+YTTEEQ+Y LFSKCG+I
Sbjct: 1 MANLYREQAQQSTYKDVRFEGSQEDWDALLNKSTTFYVGNLSFYTTEEQIYALFSKCGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
KRIIMGLD+ KTPCGFCF+E
Sbjct: 61 KRIIMGLDRVSKTPCGFCFVE 81
>gi|242065748|ref|XP_002454163.1| hypothetical protein SORBIDRAFT_04g025800 [Sorghum bicolor]
gi|241933994|gb|EES07139.1| hypothetical protein SORBIDRAFT_04g025800 [Sorghum bicolor]
Length = 242
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ FKG++ E E L ++TLY+GN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEATLLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|224031685|gb|ACN34918.1| unknown [Zea mays]
gi|413923018|gb|AFW62950.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 273
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/80 (58%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ FKG++ E E L ++TLY+GN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|223948439|gb|ACN28303.1| unknown [Zea mays]
gi|413923015|gb|AFW62947.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 141
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ FKG++ E E L ++TLY+GN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|226502054|ref|NP_001150096.1| LOC100283725 [Zea mays]
gi|195636696|gb|ACG37816.1| nuclear cap-binding protein subunit 2 [Zea mays]
Length = 243
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+Y+D+ FKG++ E E L ++TLY+GN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSAYKDRRFKGTQEEYEATLHASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|449438721|ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
gi|449476391|ref|XP_004154724.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
Length = 251
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 64/80 (80%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS YRD+ F GS+ E E L+T++T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|297791443|ref|XP_002863606.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
gi|297309441|gb|EFH39865.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 65/80 (81%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ F G++ E ++ LR ++T+Y+GN+S+YTTEEQLYELFS+ G+I
Sbjct: 1 MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFV 80
>gi|224092924|ref|XP_002309756.1| predicted protein [Populus trichocarpa]
gi|118488601|gb|ABK96113.1| unknown [Populus trichocarpa]
gi|222852659|gb|EEE90206.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 64/80 (80%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ F G++ E E L+T +T+Y+GN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDLTKLSAYRDRRFPGNQEEFEHALQTATTVYIGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|413923014|gb|AFW62946.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 92
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ FKG++ E E L ++TLY+GN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|224133438|ref|XP_002328042.1| predicted protein [Populus trichocarpa]
gi|222837451|gb|EEE75830.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 66/80 (82%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ F G++ E E+ L+T++T+Y+GN+S+Y+TEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDLTKLSAYRDRRFPGNQEEFEQALQTSTTVYIGNMSFYSTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|326924281|ref|XP_003208358.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Meleagris
gallopavo]
Length = 141
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 56/62 (90%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
+GS+ QEK L+ +STLYVGNLS+YTTEEQ+ ELFSKCGD+KRI+MGLDK KKTPCGFCF
Sbjct: 2 RGSKKLQEKFLKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDKIKKTPCGFCF 61
Query: 80 LE 81
+E
Sbjct: 62 VE 63
>gi|15988386|pdb|1H6K|Z Chain Z, Nuclear Cap Binding Complex
gi|253722193|pdb|1H6K|X Chain X, Nuclear Cap Binding Complex
gi|253722194|pdb|1H6K|Y Chain Y, Nuclear Cap Binding Complex
Length = 98
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 16 DQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPC 75
DQHF+G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLDK KT C
Sbjct: 1 DQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKM-KTAC 59
Query: 76 GFCFLE 81
GFCF+E
Sbjct: 60 GFCFVE 65
>gi|413923016|gb|AFW62948.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 248
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/80 (58%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ FKG++ E E L ++TLY+GN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|402578571|gb|EJW72525.1| nuclear cap-binding protein subunit 2, partial [Wuchereria
bancrofti]
Length = 107
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 55/61 (90%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
GS EQEKLL T+ TLYVGNLSYYTTEEQ YELFS+ GDIKRIIMG+D++KKTPCGFCF+
Sbjct: 1 GSLREQEKLLLTSKTLYVGNLSYYTTEEQTYELFSRAGDIKRIIMGIDRFKKTPCGFCFV 60
Query: 81 E 81
E
Sbjct: 61 E 61
>gi|302692632|ref|XP_003035995.1| hypothetical protein SCHCODRAFT_81360 [Schizophyllum commune
H4-8]
gi|300109691|gb|EFJ01093.1| hypothetical protein SCHCODRAFT_81360 [Schizophyllum commune
H4-8]
Length = 218
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V++P + S+Y+D + R +Q +LL +STLYVGNLS+YTTEEQ+YELFSKC
Sbjct: 1 MAHVVTPLDQPSNYKDSQARFDRQKQNELLEKSSTLYVGNLSFYTTEEQIYELFSKCARP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVE 87
>gi|388501070|gb|AFK38601.1| unknown [Lotus japonicus]
Length = 253
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 64/80 (80%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M T+ +LS+YRD+ F G++ E E+ L ++T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MATLFKDLTKLSAYRDRRFPGTQDEFEQALLASTTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFV 80
>gi|115447265|ref|NP_001047412.1| Os02g0612300 [Oryza sativa Japonica Group]
gi|75327885|sp|Q84L14.1|NCBP2_ORYSJ RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|30692291|gb|AAP33448.1| cap-binding protein CBP20 [Oryza sativa Japonica Group]
gi|47497621|dbj|BAD19690.1| cap-binding protein CBP20 [Oryza sativa Japonica Group]
gi|113536943|dbj|BAF09326.1| Os02g0612300 [Oryza sativa Japonica Group]
gi|215715365|dbj|BAG95116.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 62/80 (77%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS+YRD+ F G++ E E L+ + T+YVGN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPTKLSAYRDRRFTGTQEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
++IIMGLDK KTPCGFCF+
Sbjct: 61 RKIIMGLDKNSKTPCGFCFI 80
>gi|255553647|ref|XP_002517864.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
gi|223542846|gb|EEF44382.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
Length = 255
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + +LS+YRD+ F G++ E E L T++T+Y+GN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MALLFKDPAKLSAYRDRKFPGNQEEFEHALLTSTTVYIGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFV 80
>gi|426200543|gb|EKV50467.1| hypothetical protein AGABI2DRAFT_190786 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V++P + S+Y+D + R++Q +LL +STLY+GNLS+YTTEEQ++ELFSKC
Sbjct: 1 MAHVVTPLDQPSNYKDSQARVDRSKQAELLGKSSTLYIGNLSFYTTEEQIFELFSKCANA 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLDK +TPCGFCF+E
Sbjct: 61 EDGGGIKRIIMGLDKNTRTPCGFCFVE 87
>gi|320164899|gb|EFW41798.1| nuclear cap binding protein subunit 2 [Capsaspora owczarzaki ATCC
30864]
Length = 359
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/81 (56%), Positives = 60/81 (74%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M +VI S YRDQ FKG + EQ + L ++TLYVGNLS+ TTE Q+ ELFSKCG +
Sbjct: 1 MASVIPIDFTESQYRDQRFKGEKEEQSRKLANSTTLYVGNLSFTTTEPQMVELFSKCGPV 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+R++MGLD+ K+TPCGF F+E
Sbjct: 61 RRVVMGLDRIKRTPCGFAFVE 81
>gi|46949206|gb|AAT07459.1| cap-binding protein [Mirabilis jalapa]
Length = 147
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 65/80 (81%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ + ++S+YRD+ F G++ E E+ L+ ++TLY+GN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDATKISAYRDRRFPGNQEEFEEALKKSTTLYIGNMSFYTTEEQVYELFSRVGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+I MGLDK KTPCGFCF+
Sbjct: 61 KKITMGLDKNSKTPCGFCFV 80
>gi|409082675|gb|EKM83033.1| hypothetical protein AGABI1DRAFT_111556 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 227
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V++P + S+Y+D + R++Q +LL +STLY+GNLS+YTTEEQ++ELFSKC
Sbjct: 1 MAHVVTPLDQPSNYKDSQARVDRSKQAELLGKSSTLYIGNLSFYTTEEQIFELFSKCANA 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLDK +TPCGFCF+E
Sbjct: 61 EDGGGIKRIIMGLDKNTRTPCGFCFVE 87
>gi|449267909|gb|EMC78800.1| Nuclear cap-binding protein subunit 2, partial [Columba livia]
Length = 108
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 56/62 (90%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
+GS+ QEK L+ +STLYVGNLS+YTTEEQ+ ELFSKCGD+KRI+MGLDK KKTPCGFCF
Sbjct: 1 QGSKQLQEKSLKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDKIKKTPCGFCF 60
Query: 80 LE 81
+E
Sbjct: 61 VE 62
>gi|452819639|gb|EME26694.1| nuclear cap-binding protein subunit 2 [Galdieria sulphuraria]
Length = 195
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 60/68 (88%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRD+ F+G++ E E + T+ TLYVGNLS+YT+EEQ++ELFS CG++KRIIMGLD++++T
Sbjct: 13 YRDRRFQGTQEEYEHRIATSKTLYVGNLSFYTSEEQIWELFSLCGELKRIIMGLDRFRRT 72
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 73 PCGFCFVE 80
>gi|390598028|gb|EIN07427.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 227
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V++P + S+Y+D + R +Q +LL ++TLYVGNLS+YTTEEQ+YELFSKC
Sbjct: 1 MAHVVTPLDQPSNYKDSQARLDRQKQNELLSKSTTLYVGNLSFYTTEEQIYELFSKCASL 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G +KRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EDGGGVKRIIMGLDRNTRTPCGFCFVE 87
>gi|363808374|ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycine max]
gi|255647255|gb|ACU24095.1| unknown [Glycine max]
Length = 235
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + ++S+YRD+ F G++ E E L T++T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MALLFKDPSKISAYRDRRFPGTQEEFEHALLTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFV 80
>gi|409046123|gb|EKM55603.1| hypothetical protein PHACADRAFT_209115 [Phanerochaete carnosa
HHB-10118-sp]
Length = 225
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V+ P + S+Y+D + R +Q +LL ++TLY+GNLS+YTTEEQ+YELFSKC
Sbjct: 1 MAHVVQPLDQPSNYKDSQARVDRQKQNELLAKSTTLYIGNLSFYTTEEQIYELFSKCASP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EEGGGIKRIIMGLDRNTRTPCGFCFVE 87
>gi|392558511|gb|EIW51698.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 228
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M +I+P + S+Y+D + R Q LL +STLYVGNLS+YTTEEQ+YELFSKC
Sbjct: 1 MAHIITPLDQPSNYKDSQSRVDRQTQNDLLAKSSTLYVGNLSFYTTEEQIYELFSKCTTP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVE 87
>gi|432099893|gb|ELK28800.1| Nuclear cap-binding protein subunit 2 [Myotis davidii]
Length = 143
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+ELS + QHF E EKLL+ + TLYVGNLS T+EEQ++ELFS+CGDI+ + MGLD
Sbjct: 14 LELSKDQSQHFSADNREHEKLLKESCTLYVGNLSICTSEEQIFELFSRCGDIRNVFMGLD 73
Query: 69 KYKKTPCGFCFLE 81
K KKTPCGFCF+E
Sbjct: 74 KLKKTPCGFCFVE 86
>gi|395333541|gb|EJF65918.1| RNA-binding domain-containing protein [Dichomitus squalens
LYAD-421 SS1]
Length = 224
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M VI+P + S+Y+D + R Q +LL ++TLYVGNLS+YTTEEQ+YELFSKC
Sbjct: 1 MAHVITPLDQPSNYKDSQSRVDRQTQNELLSKSTTLYVGNLSFYTTEEQIYELFSKCTTP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVE 87
>gi|356549892|ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine
max]
Length = 258
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 63/80 (78%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + ++S+YRD+ F G++ E E L T++T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MALLFKDPSKISAYRDRRFPGTQEEFEHALVTSTTVYVGNMSFYTTEEQVYELFSRTGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFV 80
>gi|338729448|ref|XP_003365896.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Equus
caballus]
Length = 221
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 56/76 (73%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
S S ELS + DQ F G E E+LL+ +STLYVGNLS+YTTEE + ELFS+CGD+K + M
Sbjct: 68 SSSQELSEHGDQQFGGGNEEHERLLKESSTLYVGNLSFYTTEEHVLELFSRCGDVKNVFM 127
Query: 66 GLDKYKKTPCGFCFLE 81
GL K KK C FCF+E
Sbjct: 128 GLGKVKKAACNFCFVE 143
>gi|119574008|gb|EAW53623.1| nuclear cap binding protein subunit 2, 20kDa, isoform CRA_c [Homo
sapiens]
Length = 176
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 61/89 (68%), Gaps = 8/89 (8%)
Query: 1 MTTVISPSVELSSYRDQHFK--------GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYE 52
+ IS + R Q FK G EQEKLL+ + TLYVGNLS+YTTEEQ+YE
Sbjct: 19 LVRTISQYILWKKGRQQIFKVDFSVSAEGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYE 78
Query: 53 LFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LFSK GDIK+IIMGLDK KKT CGFCF+E
Sbjct: 79 LFSKSGDIKKIIMGLDKMKKTACGFCFVE 107
>gi|403415700|emb|CCM02400.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V++P + S+Y+D + R +Q ++L +STLY+GNLS+YTTEEQ+YE+FSKC
Sbjct: 1 MAHVVTPLDQPSNYKDSQARLDRQKQNEMLARSSTLYIGNLSFYTTEEQIYEIFSKCTSP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EEGGGIKRIIMGLDRNTRTPCGFCFVE 87
>gi|384248092|gb|EIE21577.1| cap-binding protein, partial [Coccomyxa subellipsoidea C-169]
Length = 145
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 59/70 (84%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
+S YRD+ F G++ + EK LR ++TLYVGNLS+YTTEEQ+YE+FS+ GDIKRIIMGLDK
Sbjct: 1 ISQYRDRRFVGTQEDFEKCLRESTTLYVGNLSFYTTEEQIYEVFSRAGDIKRIIMGLDKN 60
Query: 71 KKTPCGFCFL 80
+ TPCGF F+
Sbjct: 61 QLTPCGFAFV 70
>gi|395734618|ref|XP_003776446.1| PREDICTED: nuclear cap-binding protein subunit 2 [Pongo abelii]
gi|397469682|ref|XP_003806474.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2 [Pan
paniscus]
gi|194387106|dbj|BAG59919.1| unnamed protein product [Homo sapiens]
gi|221045194|dbj|BAH14274.1| unnamed protein product [Homo sapiens]
Length = 138
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 54/63 (85%)
Query: 19 FKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFC 78
+ G EQEKLL+ + TLYVGNLS+YTTEEQ+YELFSK GDIK+IIMGLDK KKT CGFC
Sbjct: 7 YAGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFC 66
Query: 79 FLE 81
F+E
Sbjct: 67 FVE 69
>gi|395528326|ref|XP_003766281.1| PREDICTED: nuclear cap-binding protein subunit 2-like
[Sarcophilus harrisii]
Length = 138
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 55/63 (87%)
Query: 19 FKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFC 78
F+G + +QEKLL+ + TLYVGNLS+YTTEEQ+YELF K GDIK+IIMGLDK KKT CGFC
Sbjct: 6 FQGDKKDQEKLLKKSCTLYVGNLSFYTTEEQIYELFGKSGDIKKIIMGLDKVKKTACGFC 65
Query: 79 FLE 81
F+E
Sbjct: 66 FVE 68
>gi|302143335|emb|CBI21896.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 62/80 (77%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + +LS+YRD+ F G++ + E L T+ T+Y+GN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MALLFKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|225446445|ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Vitis vinifera]
gi|359485224|ref|XP_003633238.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Vitis vinifera]
gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 3
[Vitis vinifera]
Length = 253
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 62/80 (77%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + +LS+YRD+ F G++ + E L T+ T+Y+GN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MALLFKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNSKTPCGFCFV 80
>gi|449547414|gb|EMD38382.1| hypothetical protein CERSUDRAFT_113542 [Ceriporiopsis
subvermispora B]
Length = 228
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V++P + S+Y+D + R +Q ++L ++TLYVGNLS+YTTEEQ+YE+FSKC
Sbjct: 1 MAHVVTPLDQPSNYKDSQARIDRTKQNEILTKSTTLYVGNLSFYTTEEQIYEVFSKCTNP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVE 87
>gi|378734572|gb|EHY61031.1| hypothetical protein HMPREF1120_08971 [Exophiala dermatitidis
NIH/UT8656]
Length = 166
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 59/66 (89%)
Query: 16 DQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPC 75
D+ G++AE++ L+ +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD+++KTPC
Sbjct: 20 DRDGAGNKAEEDDELKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPC 79
Query: 76 GFCFLE 81
GFCF+E
Sbjct: 80 GFCFVE 85
>gi|339240227|ref|XP_003376039.1| nuclear cap-binding protein subunit 2 [Trichinella spiralis]
gi|316975267|gb|EFV58716.1| nuclear cap-binding protein subunit 2 [Trichinella spiralis]
Length = 148
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 59/68 (86%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRD FKG+ + +KLL+++ST+YVGNLS+ +TE+Q+Y LFS+ GDI+R+IMGLD+ K+T
Sbjct: 10 YRDSRFKGTDEQWQKLLKSSSTIYVGNLSFCSTEDQIYALFSRAGDIRRVIMGLDREKRT 69
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 70 PCGFCFVE 77
>gi|340369394|ref|XP_003383233.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Amphimedon
queenslandica]
Length = 180
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 58/71 (81%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
LS+YRD + ++LL ++TLYVGNLS+YTTEEQ+YELFS GD+KR+IMGLD++
Sbjct: 7 LSNYRDHKADIDPDDYQQLLVQSTTLYVGNLSFYTTEEQIYELFSMAGDVKRVIMGLDRH 66
Query: 71 KKTPCGFCFLE 81
KKTPCGFCF+E
Sbjct: 67 KKTPCGFCFVE 77
>gi|158513766|sp|A6PVI3.1|NCB2L_HUMAN RecName: Full=Nuclear cap-binding protein subunit 2-like
Length = 153
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
P++ELS YRD F G + +QEKLL+ +STL +GNLS+YTTEE+++ELFS+ DI+ I M
Sbjct: 11 DPALELSCYRDHQFSGRKFQQEKLLKESSTLNMGNLSFYTTEEKIHELFSR-SDIRNIFM 69
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK KKT CGFCF+E
Sbjct: 70 GLDKIKKTACGFCFVE 85
>gi|220936494|gb|ACL83596.1| CBP20 [Hordeum vulgare]
gi|326508016|dbj|BAJ86751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 241
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS YRD+ F G++ E E L + T+YVGN+S+YTTEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSVYRDRRFPGTQEEFEGALLASLTVYVGNMSFYTTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFI 80
>gi|388857120|emb|CCF49335.1| probable nuclear cap binding protein subunit 2 [Ustilago hordei]
Length = 269
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M+ ++ P SSYRD S+AEQ LR TSTLY+GNLS+YTTEEQ+YE+F +
Sbjct: 1 MSHILEPLDAPSSYRDSRSAASKAEQHAQLRATSTLYLGNLSFYTTEEQIYEVFGRVASL 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+Y KTPCGF F+E
Sbjct: 61 STGGGIKRIIMGLDRYAKTPCGFAFVE 87
>gi|281338812|gb|EFB14396.1| hypothetical protein PANDA_011618 [Ailuropoda melanoleuca]
Length = 153
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
S+ELS YRDQHF EQEK L+ +STLYVGNLS++TT++Q++ELF +CG+ K + M
Sbjct: 11 DSSLELSQYRDQHFDVDDDEQEKSLKESSTLYVGNLSFHTTDKQIHELFGRCGNTKHVFM 70
Query: 66 GLDKYKKTPCGFCFLE 81
G+DK KK C FCF+E
Sbjct: 71 GVDKIKKKACSFCFVE 86
>gi|224460059|gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ ++S+YRD+ F G++ E E L + T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+I+MGLDK KTPCGFCF+
Sbjct: 61 KKIVMGLDKNSKTPCGFCFI 80
>gi|219944397|gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|219944399|gb|ACL54981.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|224460063|gb|ACN43582.1| nuclear cap-binding protein [Solanum tuberosum]
gi|262065509|gb|ACY07775.1| CBP20 protein [Solanum tuberosum]
Length = 255
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ ++S+YRD+ F G++ E E L + T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+I+MGLDK KTPCGFCF+
Sbjct: 61 KKIVMGLDKNSKTPCGFCFI 80
>gi|219944401|gb|ACL54982.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|219944403|gb|ACL54983.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|224460057|gb|ACN43579.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ ++S+YRD+ F G++ E E L + T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+I+MGLDK KTPCGFCF+
Sbjct: 61 KKIVMGLDKNSKTPCGFCFI 80
>gi|449270094|gb|EMC80813.1| Nuclear cap-binding protein subunit 2, partial [Columba livia]
Length = 131
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 56/62 (90%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
+G+R +QE+LLR + TLYVGNLS+YTTEEQ++ELFSK GDIK++IMGLDK KKT CGFCF
Sbjct: 1 QGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFSKSGDIKKVIMGLDKVKKTACGFCF 60
Query: 80 LE 81
+E
Sbjct: 61 VE 62
>gi|226897447|gb|ACO90183.1| nuclear cap-binding protein 20 [Nicotiana tabacum]
Length = 171
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ ++S+YRD+ F G++ E E L +T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLKATTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+I+MGLDK KTPCGFCF+
Sbjct: 61 KKIVMGLDKNCKTPCGFCFV 80
>gi|301774438|ref|XP_002922645.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Ailuropoda
melanoleuca]
Length = 175
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 58/74 (78%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
S+ELS YRDQHF EQEK L+ +STLYVGNLS++TT++Q++ELF +CG+ K + MG+
Sbjct: 27 SLELSQYRDQHFDVDDDEQEKSLKESSTLYVGNLSFHTTDKQIHELFGRCGNTKHVFMGV 86
Query: 68 DKYKKTPCGFCFLE 81
DK KK C FCF+E
Sbjct: 87 DKIKKKACSFCFVE 100
>gi|307106138|gb|EFN54385.1| hypothetical protein CHLNCDRAFT_14225, partial [Chlorella
variabilis]
Length = 148
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 65/76 (85%), Gaps = 2/76 (2%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
++P++ S Y+D+ F G++ E E+ L T++T+YVGNLS++TTE+Q++E+FSK GD+KRI+
Sbjct: 8 LNPAI--SQYKDRRFCGTQQEFEECLHTSTTVYVGNLSFFTTEDQIFEVFSKVGDVKRIV 65
Query: 65 MGLDKYKKTPCGFCFL 80
MGLDK++ TPCGFCF+
Sbjct: 66 MGLDKHRSTPCGFCFV 81
>gi|229368112|gb|ACQ59036.1| Nuclear cap-binding protein subunit 2 [Anoplopoma fimbria]
Length = 94
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
Query: 1 MTTVISPS-VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD 59
+ +IS S V++S YRDQHFKG+R +QEKLL+ + TLYVGNLS+Y+TE+Q++E+FSK G
Sbjct: 5 LNALISDSYVDVSQYRDQHFKGNRYDQEKLLKQSHTLYVGNLSFYSTEDQVHEIFSKSGG 64
Query: 60 IKRIIMGLDKYKKT 73
+KRI++GLDK KKT
Sbjct: 65 VKRIVIGLDKVKKT 78
>gi|357150102|ref|XP_003575342.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Brachypodium distachyon]
Length = 240
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS YRD+ F G++ E E L + T+YVGN+S+YTTEEQ YELF++ G+I
Sbjct: 1 MASLFKDPSKLSVYRDRRFSGTQEEFEAALLASLTVYVGNMSFYTTEEQAYELFTRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFV 80
>gi|326925913|ref|XP_003209151.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Meleagris
gallopavo]
Length = 154
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
G+R +QE+LLR + TLYVGNLS+YTTEEQ++ELF K GDIK+IIMGLDK KKT CGFCF+
Sbjct: 25 GTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFGKSGDIKKIIMGLDKVKKTACGFCFV 84
Query: 81 E 81
E
Sbjct: 85 E 85
>gi|224460055|gb|ACN43578.1| nuclear cap-binding protein [Nicotiana tabacum]
gi|261866539|gb|ACY02034.1| cap binding protein 20 [Nicotiana tabacum]
Length = 254
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ ++S+YRD+ F G++ E E L +T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLKATTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+I+MGLDK KTPCGFCF+
Sbjct: 61 KKIVMGLDKNCKTPCGFCFV 80
>gi|367049898|ref|XP_003655328.1| hypothetical protein THITE_42108 [Thielavia terrestris NRRL 8126]
gi|347002592|gb|AEO68992.1| hypothetical protein THITE_42108 [Thielavia terrestris NRRL 8126]
Length = 188
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 52/56 (92%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E LL+ +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 46 EEDLLKNATTLYVGNLSFYTTEEQIYELFSKCGEIKRLVMGLDRFNKTPCGFCFVE 101
>gi|168472717|gb|ACA24134.1| cap-binding protein CBP20 [Lolium temulentum]
Length = 231
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 60/80 (75%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS YRD+ F G++ E E L + T+YVGN+S+Y+TEEQ YELFS+ G+I
Sbjct: 1 MASLFKDPSKLSVYRDRRFPGTQEEFEAALLASLTVYVGNMSFYSTEEQAYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK +TPCGFCF+
Sbjct: 61 KKIIMGLDKNTRTPCGFCFV 80
>gi|336367021|gb|EGN95366.1| hypothetical protein SERLA73DRAFT_186286 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379746|gb|EGO20900.1| hypothetical protein SERLADRAFT_475254 [Serpula lacrymans var.
lacrymans S7.9]
Length = 225
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V+ + S+Y+D + R++Q +LL ++TLY+GNLS+YTTEEQ+YELF+KC
Sbjct: 1 MAHVVQALDQPSNYKDSQARVDRSKQNELLSRSTTLYIGNLSFYTTEEQIYELFTKCASP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVE 87
>gi|402225704|gb|EJU05765.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M +++P S+Y+D R+ Q ++L + TLY+GNLS+YTTEEQ+YELFSKC
Sbjct: 1 MAHIVTPLDRPSTYKDSRSNIERSHQAEMLSKSCTLYIGNLSFYTTEEQIYELFSKCANP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G +KRIIMGLD+ +KTPCGFCF+E
Sbjct: 61 EDGGGLKRIIMGLDRNQKTPCGFCFVE 87
>gi|170094038|ref|XP_001878240.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646694|gb|EDR10939.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 228
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V+S + S+Y+D + R +Q ++L ++TLY+GNLS+YTTEEQ+YELF+KC
Sbjct: 1 MAHVVSSLDQPSNYKDSQTRVDRMKQNEMLSKSTTLYIGNLSFYTTEEQIYELFTKCASP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVE 87
>gi|346971258|gb|EGY14710.1| nuclear cap-binding protein subunit 2 [Verticillium dahliae
VdLs.17]
Length = 186
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 15 RDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
R++ A QE L ++TLYVGNLS+YTTEEQ+YELF+KCG+IKR++MGLD++ KTP
Sbjct: 31 REEEADAPPAPQEDPLANSTTLYVGNLSFYTTEEQVYELFAKCGEIKRLVMGLDRFNKTP 90
Query: 75 CGFCFLE 81
CGFCF+E
Sbjct: 91 CGFCFVE 97
>gi|255087756|ref|XP_002505801.1| predicted protein [Micromonas sp. RCC299]
gi|226521071|gb|ACO67059.1| predicted protein [Micromonas sp. RCC299]
Length = 146
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 62/81 (76%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + S L+ Y+D+ FKGS E LR+++TLYVGN+S++T+EEQ++ LF+KCG +
Sbjct: 1 MARLFLDSEPLTQYKDRLFKGSMEEYLDRLRSSATLYVGNVSFFTSEEQIWSLFAKCGVV 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
K +IMGLDK+K TPCGFCF+E
Sbjct: 61 KTVIMGLDKHKLTPCGFCFVE 81
>gi|320590561|gb|EFX03004.1| small subunit of nuclear cap-binding protein complex [Grosmannia
clavigera kw1407]
Length = 218
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 6/73 (8%)
Query: 15 RDQHFKGSRAEQEKL------LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
RD H +G +K LR +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD
Sbjct: 28 RDNHGRGEDEVPDKPQAIDDPLRNATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLD 87
Query: 69 KYKKTPCGFCFLE 81
++ KTPCGFCF+E
Sbjct: 88 RFNKTPCGFCFVE 100
>gi|345569023|gb|EGX51892.1| hypothetical protein AOL_s00043g626 [Arthrobotrys oligospora ATCC
24927]
Length = 220
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
Query: 12 SSYRDQHFKGSR---AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
S+Y D+ K +R A +E L+ +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD
Sbjct: 71 STYYDKSGKRTRDDAANKEDPLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLD 130
Query: 69 KYKKTPCGFCFLE 81
++ KTPCGFCF+E
Sbjct: 131 RFAKTPCGFCFVE 143
>gi|357150105|ref|XP_003575343.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Brachypodium distachyon]
Length = 248
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ +LS YRD+ F G++ E E L + T+YVGN+S+YTTEEQ YELF++ G+I
Sbjct: 1 MASLFKDPSKLSVYRDRRFSGTQEEFEAALLASLTVYVGNMSFYTTEEQAYELFTRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+IIMGLDK KTPCGFCF+
Sbjct: 61 KKIIMGLDKNTKTPCGFCFV 80
>gi|149393013|gb|ABR26569.1| cap-binding protein CPB20 [Lolium perenne]
Length = 218
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
PS +LS YRD+ F G++ E E L + T+YVGN+S+Y+TEEQ YELFS+ G+IK+IIM
Sbjct: 1 DPS-KLSVYRDRRFTGTQEEFEAALLASLTVYVGNMSFYSTEEQAYELFSRAGEIKKIIM 59
Query: 66 GLDKYKKTPCGFCFL 80
GLDK KTPCGFCF+
Sbjct: 60 GLDKNTKTPCGFCFV 74
>gi|407921598|gb|EKG14739.1| hypothetical protein MPH_08014 [Macrophomina phaseolina MS6]
Length = 173
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 57/70 (81%), Gaps = 6/70 (8%)
Query: 18 HFKGSRAEQEKL------LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
H +G E+EK L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD+Y+
Sbjct: 30 HVEGDHEEREKTPDFEEKLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRYQ 89
Query: 72 KTPCGFCFLE 81
KTPCGFCF+E
Sbjct: 90 KTPCGFCFVE 99
>gi|189188792|ref|XP_001930735.1| nuclear cap-binding protein subunit 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|330939415|ref|XP_003305844.1| hypothetical protein PTT_18794 [Pyrenophora teres f. teres 0-1]
gi|187972341|gb|EDU39840.1| nuclear cap-binding protein subunit 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|311316986|gb|EFQ86077.1| hypothetical protein PTT_18794 [Pyrenophora teres f. teres 0-1]
Length = 168
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
+G E LR +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD+++KTPCGFCF
Sbjct: 34 RGRSPSPEDKLRDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPCGFCF 93
Query: 80 LE 81
+E
Sbjct: 94 VE 95
>gi|393245473|gb|EJD52983.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M ++ P S Y+D + R Q L ++TLYVGNLS+YTTEEQ+YELFS+C
Sbjct: 1 MAHIVQPLDSPSGYKDSQHRLDRQRQLDQLSRSTTLYVGNLSFYTTEEQIYELFSRCTNP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ KTPCGFCF+E
Sbjct: 61 EEGGGIKRIIMGLDRNTKTPCGFCFVE 87
>gi|393216904|gb|EJD02394.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 223
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V+ + S+Y+D K R +Q LL ++TLYVGNLS+YTTEEQ+YELFSK
Sbjct: 1 MAHVVPSLDQPSNYKDSQSKVDRQKQNDLLSKSTTLYVGNLSFYTTEEQIYELFSKAASP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G +KRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EEGGGVKRIIMGLDRNTRTPCGFCFVE 87
>gi|226483675|emb|CAX74138.1| Nuclear cap-binding protein subunit 2 [Schistosoma japonicum]
Length = 158
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%)
Query: 4 VISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRI 63
++ S S YRD+ S E K LR T+TLY+GNLS+YT EEQ++ELFS+ G+IKR+
Sbjct: 10 ILDASFYKSPYRDRRNDHSPRELSKCLRETTTLYIGNLSFYTREEQIWELFSRAGEIKRV 69
Query: 64 IMGLDKYKKTPCGFCFLE 81
IMGL ++ KTPCGFCF+E
Sbjct: 70 IMGLHRFDKTPCGFCFVE 87
>gi|358334772|dbj|GAA53215.1| nuclear cap-binding protein subunit 2 [Clonorchis sinensis]
Length = 159
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%)
Query: 4 VISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRI 63
++ + S YRD+ S + ++ LR ++TLYVGNLS+YT EEQ++ELFS+ G+IKR+
Sbjct: 10 ILDSAFYKSPYRDRRNDASSKQLQRALRQSTTLYVGNLSFYTREEQIWELFSRAGEIKRV 69
Query: 64 IMGLDKYKKTPCGFCFLE 81
IMGL ++ KTPCGFCF+E
Sbjct: 70 IMGLHRFHKTPCGFCFVE 87
>gi|367028146|ref|XP_003663357.1| hypothetical protein MYCTH_2062826 [Myceliophthora thermophila ATCC
42464]
gi|347010626|gb|AEO58112.1| hypothetical protein MYCTH_2062826 [Myceliophthora thermophila ATCC
42464]
Length = 188
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 51/56 (91%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E L+ +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 46 EEDPLKNATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVE 101
>gi|443900036|dbj|GAC77363.1| CCR4-NOT transcriptional regulation complex, NOT5 subunit
[Pseudozyma antarctica T-34]
Length = 250
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M+ ++ P SSYRD S+ EQ++ LR T+TLY+GNLS+YTTEEQ+YE+F +
Sbjct: 1 MSHILEPLDAPSSYRDSRSHSSKHEQQQALRQTATLYLGNLSFYTTEEQIYEVFGRVANV 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +KTPCGF F+E
Sbjct: 61 GAGGGIKRIIMGLDRNQKTPCGFAFVE 87
>gi|226468430|emb|CAX69892.1| Nuclear cap-binding protein subunit 2 [Schistosoma japonicum]
Length = 144
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%)
Query: 4 VISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRI 63
++ S S YRD+ S E K LR T+TLY+GNLS+YT EEQ++ELFS+ G+IKR+
Sbjct: 10 ILDASFYKSPYRDRRNDHSPRELSKCLRETTTLYIGNLSFYTREEQIWELFSRAGEIKRV 69
Query: 64 IMGLDKYKKTPCGFCFLE 81
IMGL ++ KTPCGFCF+E
Sbjct: 70 IMGLHRFDKTPCGFCFVE 87
>gi|302410829|ref|XP_003003248.1| nuclear cap-binding protein subunit 2 [Verticillium albo-atrum
VaMs.102]
gi|261358272|gb|EEY20700.1| nuclear cap-binding protein subunit 2 [Verticillium albo-atrum
VaMs.102]
Length = 186
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 51/56 (91%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
QE L ++TLYVGNLS+YTTEEQ+YELF+KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 42 QEDPLANSTTLYVGNLSFYTTEEQVYELFAKCGEIKRLVMGLDRFNKTPCGFCFVE 97
>gi|392595729|gb|EIW85052.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 226
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Query: 1 MTTVISPSVELSSYRD-QHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC-- 57
M V+ + S+Y+D Q+ R+ Q+ LL ++TLY+GNLS+YTTEEQ+YELFSKC
Sbjct: 1 MAHVVQRMDQPSNYKDSQNRSMDRSTQQDLLTKSTTLYIGNLSFYTTEEQIYELFSKCAS 60
Query: 58 ----GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ +TPCGFCF+E
Sbjct: 61 PEDGGGIKRIIMGLDRNTRTPCGFCFVE 88
>gi|389748735|gb|EIM89912.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 226
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V++ + S+Y+D + R +Q +L ++TLYVGNLS+YTTEEQ++++FSKC
Sbjct: 1 MANVVTSLDKPSNYKDSQARYDRRQQNDMLSQSTTLYVGNLSFYTTEEQIHDIFSKCANP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G +KRIIMGLD+ +TPCGFCF+E
Sbjct: 61 EDGGGVKRIIMGLDRNTRTPCGFCFVE 87
>gi|224460061|gb|ACN43581.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/80 (53%), Positives = 61/80 (76%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M ++ ++S+YRD+ F G++ E E L + T+YVGN+S+YTTEEQ+YELFS+ G+I
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 61 KRIIMGLDKYKKTPCGFCFL 80
K+I+MGLDK KTP GFCF+
Sbjct: 61 KKIVMGLDKNSKTPWGFCFI 80
>gi|396474113|ref|XP_003839494.1| hypothetical protein LEMA_P031670.1 [Leptosphaeria maculans JN3]
gi|312216063|emb|CBX96015.1| hypothetical protein LEMA_P031670.1 [Leptosphaeria maculans JN3]
Length = 170
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 51/55 (92%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E LR +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD+++KTPCGFCF+E
Sbjct: 43 EDKLRDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPCGFCFVE 97
>gi|449018759|dbj|BAM82161.1| similar to nuclear cap-binding protein; CBP20 [Cyanidioschyzon
merolae strain 10D]
Length = 143
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 58/71 (81%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
+S+YRD+ + G+ ++E+ L T T+YVGNLS YTTEEQ+Y++F G++KR++MGLD++
Sbjct: 12 VSTYRDRQYVGTYEQREEQLLKTQTVYVGNLSVYTTEEQIYQVFGMAGEVKRVVMGLDRF 71
Query: 71 KKTPCGFCFLE 81
K TPCGFCF+E
Sbjct: 72 KLTPCGFCFVE 82
>gi|301103105|ref|XP_002900639.1| elicitin-like protein [Phytophthora infestans T30-4]
gi|262101902|gb|EEY59954.1| elicitin-like protein [Phytophthora infestans T30-4]
Length = 355
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/68 (60%), Positives = 56/68 (82%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S AEQ++ + +STLYVGNLS++T+E Q+YELFS+ G +KR+IMGLD++KKT
Sbjct: 140 YWDRKTFSSFAEQQRAMERSSTLYVGNLSFFTSEAQIYELFSRVGHVKRVIMGLDRFKKT 199
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 200 PCGFCFVE 207
>gi|159464685|ref|XP_001690572.1| hypothetical protein CHLREDRAFT_169371 [Chlamydomonas
reinhardtii]
gi|158280072|gb|EDP05831.1| predicted protein [Chlamydomonas reinhardtii]
Length = 156
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
Query: 4 VISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRI 63
V++P++ + YRD+ F+G+ A+ E L +++T+YVGNL++ T EEQLY++F + G IKRI
Sbjct: 16 VLNPAI--TQYRDRRFEGTEADWEHALTSSTTVYVGNLAFTTREEQLYDVFGRVGHIKRI 73
Query: 64 IMGLDKYKKTPCGFCF 79
+MGLDK +KTPCGF F
Sbjct: 74 VMGLDKVQKTPCGFAF 89
>gi|171685652|ref|XP_001907767.1| hypothetical protein [Podospora anserina S mat+]
gi|170942787|emb|CAP68440.1| unnamed protein product [Podospora anserina S mat+]
Length = 186
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 51/57 (89%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E + L+ +TLYVGNLS++TTEEQ+YELFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 48 EDDDPLKNATTLYVGNLSFFTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVE 104
>gi|302830043|ref|XP_002946588.1| hypothetical protein VOLCADRAFT_79141 [Volvox carteri f.
nagariensis]
gi|300268334|gb|EFJ52515.1| hypothetical protein VOLCADRAFT_79141 [Volvox carteri f.
nagariensis]
Length = 284
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/76 (52%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
Query: 4 VISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRI 63
V++P++ + YRD+ F+GS + E L T++T+YVGNL++ T EEQLY++F + G IKRI
Sbjct: 3 VLNPAI--TQYRDRRFEGSETDWENALATSTTIYVGNLAFTTREEQLYDVFGRVGHIKRI 60
Query: 64 IMGLDKYKKTPCGFCF 79
+MGLDK ++TPCGF F
Sbjct: 61 VMGLDKIQRTPCGFAF 76
>gi|340516274|gb|EGR46523.1| predicted protein [Trichoderma reesei QM6a]
Length = 178
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS+YTTEEQ+YELFSKCG+IKRIIMGLD++ KTPCGFCF+E
Sbjct: 51 LANATTLYVGNLSFYTTEEQVYELFSKCGEIKRIIMGLDRFNKTPCGFCFVE 102
>gi|169612940|ref|XP_001799887.1| hypothetical protein SNOG_09598 [Phaeosphaeria nodorum SN15]
gi|160702614|gb|EAT82863.2| hypothetical protein SNOG_09598 [Phaeosphaeria nodorum SN15]
Length = 150
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 52/57 (91%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E E L+ +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD+++KTPCGFCF+E
Sbjct: 22 EPEDKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPCGFCFVE 78
>gi|296423836|ref|XP_002841458.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637698|emb|CAZ85649.1| unnamed protein product [Tuber melanosporum]
Length = 156
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
+TTV S + + + S + + L+ STLYVGNLS+YTTEEQ++ELFSKCG+I
Sbjct: 3 ITTVQRLDAPSSYFEKRERRRSTSPKPDPLKDASTLYVGNLSFYTTEEQIHELFSKCGEI 62
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
KR++MGLD++ KTPCGFCF+E
Sbjct: 63 KRLVMGLDRFTKTPCGFCFVE 83
>gi|340959251|gb|EGS20432.1| hypothetical protein CTHT_0022620 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 190
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD+Y KTPCGFCF+E
Sbjct: 50 LQNATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRYTKTPCGFCFVE 101
>gi|451850516|gb|EMD63818.1| hypothetical protein COCSADRAFT_91061 [Cochliobolus sativus
ND90Pr]
Length = 168
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Query: 15 RDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
RD+ S + ++KL + +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD+++KTP
Sbjct: 30 RDEERARSPSPEDKL-KDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTP 88
Query: 75 CGFCFLE 81
CGFCF+E
Sbjct: 89 CGFCFVE 95
>gi|400601593|gb|EJP69236.1| nuclear cap-binding protein subunit 2 [Beauveria bassiana ARSEF
2860]
Length = 177
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 49/56 (87%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
Q L +TLYVGNLS+YTTEEQ+YELFSKCG+IKR+IMGLD++ KTPCGFCF+E
Sbjct: 47 QPDPLADATTLYVGNLSFYTTEEQVYELFSKCGEIKRLIMGLDRFSKTPCGFCFVE 102
>gi|310789500|gb|EFQ25033.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 190
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E L +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 52 EDPLANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVE 106
>gi|109131846|ref|XP_001091350.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Macaca
mulatta]
gi|355705055|gb|EHH30980.1| Nuclear cap-binding protein subunit 2-like protein [Macaca
mulatta]
gi|355757604|gb|EHH61129.1| Nuclear cap-binding protein subunit 2-like protein [Macaca
fascicularis]
Length = 153
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
P +ELS RD F GS+ +QEKLL+ +ST+ + NLS+YTTEE+++ELFS+ DI+ I M
Sbjct: 11 DPVLELSCCRDHQFSGSKFQQEKLLKESSTMNMRNLSFYTTEEKIHELFSR-SDIRNIFM 69
Query: 66 GLDKYKKTPCGFCFLE 81
GLDK KKT CGFCF+E
Sbjct: 70 GLDKIKKTACGFCFVE 85
>gi|452000551|gb|EMD93012.1| hypothetical protein COCHEDRAFT_1097649 [Cochliobolus
heterostrophus C5]
Length = 168
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Query: 15 RDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
RD+ S + ++KL + +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD+++KTP
Sbjct: 30 RDEDRARSPSPEDKL-KDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTP 88
Query: 75 CGFCFLE 81
CGFCF+E
Sbjct: 89 CGFCFVE 95
>gi|71001020|ref|XP_755191.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus Af293]
gi|66852829|gb|EAL93153.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus Af293]
gi|159129280|gb|EDP54394.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus A1163]
Length = 184
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD+Y KTPCGFCF+E
Sbjct: 51 LKNATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRYNKTPCGFCFVE 102
>gi|402911091|ref|XP_003918176.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Papio
anubis]
Length = 153
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 7 PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMG 66
P +ELS RD F GS+ +QEKLL+ +ST+ + NLS+YTTEE+++ELFS+ DI+ I MG
Sbjct: 12 PVLELSCCRDHQFSGSKFQQEKLLKESSTMNMRNLSFYTTEEKIHELFSR-SDIRNIFMG 70
Query: 67 LDKYKKTPCGFCFLE 81
LDK KKT CGFCF+E
Sbjct: 71 LDKIKKTACGFCFVE 85
>gi|358379360|gb|EHK17040.1| hypothetical protein TRIVIDRAFT_41964 [Trichoderma virens Gv29-8]
Length = 178
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS+YTTEEQ+YELFSKCG+IKR+IMGLD++ KTPCGFCF+E
Sbjct: 52 LANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLIMGLDRFNKTPCGFCFVE 103
>gi|348671723|gb|EGZ11543.1| hypothetical protein PHYSODRAFT_303573 [Phytophthora sojae]
Length = 249
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 40/68 (58%), Positives = 56/68 (82%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S AEQ++ + +STLY+GNLS++T+E Q+YELFS+ G +KR+IMGLD++KKT
Sbjct: 24 YWDRKTFSSFAEQQRAMARSSTLYIGNLSFFTSEAQIYELFSRVGHVKRVIMGLDRFKKT 83
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 84 PCGFCFVE 91
>gi|429860697|gb|ELA35423.1| nuclear cap binding protein subunit 2 [Colletotrichum
gloeosporioides Nara gc5]
Length = 174
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 12 SSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
+ +RD E L +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD++
Sbjct: 28 NDHRDDEDSRPAEPAEDPLAHATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFN 87
Query: 72 KTPCGFCFLE 81
KTPCGFCF+E
Sbjct: 88 KTPCGFCFVE 97
>gi|358369812|dbj|GAA86425.1| small subunit of nuclear cap-binding protein complex [Aspergillus
kawachii IFO 4308]
Length = 176
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 68/94 (72%), Gaps = 13/94 (13%)
Query: 1 MTTVISPSVEL----SSY---RDQHFKGSRAEQEKL------LRTTSTLYVGNLSYYTTE 47
M+T++ +VE S+Y +++ K S E EK L+ +TLYVGNLS+YTTE
Sbjct: 1 MSTLVHNTVERLDRPSAYYLGKNKRRKFSHDEAEKPEDPVDNLKDATTLYVGNLSFYTTE 60
Query: 48 EQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ++ELF+KCG+IKR++MGLD+Y KTPCGFCF+E
Sbjct: 61 EQIHELFAKCGEIKRLVMGLDRYNKTPCGFCFVE 94
>gi|406864547|gb|EKD17592.1| nuclear cap binding protein subunit 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 178
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 50/55 (90%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E L+ +TLYVGNLS+YTTEEQ++ELFSKCG+IKR+IMGLD++ KTPCGFCF+E
Sbjct: 43 EDPLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLIMGLDRFSKTPCGFCFVE 97
>gi|440633794|gb|ELR03713.1| nuclear cap-binding protein subunit 2 [Geomyces destructans
20631-21]
Length = 177
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 50/56 (89%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
QE L+ +TLYVGNLS+YTTEEQ++ELF KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 41 QEDPLKDAATLYVGNLSFYTTEEQIHELFVKCGEIKRLVMGLDRFNKTPCGFCFVE 96
>gi|242776508|ref|XP_002478850.1| small subunit of nuclear cap-binding protein complex [Talaromyces
stipitatus ATCC 10500]
gi|218722469|gb|EED21887.1| small subunit of nuclear cap-binding protein complex [Talaromyces
stipitatus ATCC 10500]
Length = 174
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 50/52 (96%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LR +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD+++KTPCGFCF+E
Sbjct: 42 LRNATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTPCGFCFVE 93
>gi|389639318|ref|XP_003717292.1| nuclear cap-binding protein subunit 2 [Magnaporthe oryzae 70-15]
gi|351643111|gb|EHA50973.1| nuclear cap-binding protein subunit 2 [Magnaporthe oryzae 70-15]
gi|440468875|gb|ELQ38009.1| nuclear cap-binding protein subunit 2 [Magnaporthe oryzae Y34]
gi|440480932|gb|ELQ61564.1| nuclear cap-binding protein subunit 2 [Magnaporthe oryzae P131]
Length = 185
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L ++TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 44 LANSTTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVE 95
>gi|212532775|ref|XP_002146544.1| small subunit of nuclear cap-binding protein complex [Talaromyces
marneffei ATCC 18224]
gi|210071908|gb|EEA25997.1| small subunit of nuclear cap-binding protein complex [Talaromyces
marneffei ATCC 18224]
Length = 174
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 50/52 (96%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LR +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD+++KTPCGFCF+E
Sbjct: 42 LRNATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTPCGFCFVE 93
>gi|322699589|gb|EFY91349.1| nuclear cap binding protein subunit 2 [Metarhizium acridum CQMa
102]
Length = 175
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS+YTTEEQ+YELFSKCG+IKR+IMGLD+++KTPCGFCF+E
Sbjct: 47 LANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLIMGLDRFQKTPCGFCFVE 98
>gi|119480671|ref|XP_001260364.1| small subunit of nuclear cap-binding protein complex [Neosartorya
fischeri NRRL 181]
gi|119408518|gb|EAW18467.1| small subunit of nuclear cap-binding protein complex [Neosartorya
fischeri NRRL 181]
Length = 196
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD+Y KTPCGFCF+E
Sbjct: 63 LKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRYNKTPCGFCFVE 114
>gi|327303374|ref|XP_003236379.1| nuclear cap binding protein subunit 2 [Trichophyton rubrum CBS
118892]
gi|326461721|gb|EGD87174.1| nuclear cap binding protein subunit 2 [Trichophyton rubrum CBS
118892]
gi|326478905|gb|EGE02915.1| nuclear cap-binding protein subunit 2 [Trichophyton equinum CBS
127.97]
Length = 168
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 56/70 (80%), Gaps = 6/70 (8%)
Query: 18 HFKGSRAEQ------EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
H +G R E + L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD+++
Sbjct: 29 HDRGEREEDKPQADFDASLKEATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQ 88
Query: 72 KTPCGFCFLE 81
KTPCGFCF+E
Sbjct: 89 KTPCGFCFVE 98
>gi|296812787|ref|XP_002846731.1| nuclear cap binding protein subunit 2 [Arthroderma otae CBS
113480]
gi|238841987|gb|EEQ31649.1| nuclear cap binding protein subunit 2 [Arthroderma otae CBS
113480]
Length = 178
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 59/71 (83%), Gaps = 8/71 (11%)
Query: 18 HFKGSRAEQEKL-------LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
H +G R E++K+ L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++
Sbjct: 30 HDRGDR-EEDKIQGDFDVSLKEATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRF 88
Query: 71 KKTPCGFCFLE 81
+KTPCGFCF+E
Sbjct: 89 QKTPCGFCFVE 99
>gi|326469569|gb|EGD93578.1| nuclear cap binding protein subunit 2 [Trichophyton tonsurans CBS
112818]
Length = 168
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 56/70 (80%), Gaps = 6/70 (8%)
Query: 18 HFKGSRAEQ------EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
H +G R E + L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD+++
Sbjct: 29 HDRGEREEDKPQADFDASLKEATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQ 88
Query: 72 KTPCGFCFLE 81
KTPCGFCF+E
Sbjct: 89 KTPCGFCFVE 98
>gi|145246436|ref|XP_001395467.1| nuclear cap-binding protein subunit 2 [Aspergillus niger CBS
513.88]
gi|134080183|emb|CAK46163.1| unnamed protein product [Aspergillus niger]
gi|350636821|gb|EHA25179.1| hypothetical protein ASPNIDRAFT_211639 [Aspergillus niger ATCC
1015]
Length = 176
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 68/94 (72%), Gaps = 13/94 (13%)
Query: 1 MTTVISPSVEL----SSY---RDQHFKGSRAEQEKL------LRTTSTLYVGNLSYYTTE 47
M+T++ +VE S+Y +++ K S E EK L+ +TLYVGNLS+YTTE
Sbjct: 1 MSTLVHNTVERLDRPSAYYLGKNKRRKFSHDEGEKPEDPTDNLKDATTLYVGNLSFYTTE 60
Query: 48 EQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ++ELF+KCG+IKR++MGLD+Y KTPCGFCF+E
Sbjct: 61 EQIHELFAKCGEIKRLVMGLDRYNKTPCGFCFVE 94
>gi|303312473|ref|XP_003066248.1| Nuclear cap binding protein subunit 2 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105910|gb|EER24103.1| Nuclear cap binding protein subunit 2 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320033670|gb|EFW15617.1| nuclear cap binding protein subunit 2 [Coccidioides posadasii str.
Silveira]
Length = 187
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 51/57 (89%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E E L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 50 EAEDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFVE 106
>gi|322709267|gb|EFZ00843.1| nuclear cap binding protein subunit 2 [Metarhizium anisopliae
ARSEF 23]
Length = 175
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD+++KTPCGFCF+E
Sbjct: 47 LANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFQKTPCGFCFVE 98
>gi|358059162|dbj|GAA95101.1| hypothetical protein E5Q_01756 [Mixia osmundae IAM 14324]
Length = 204
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 56/70 (80%)
Query: 12 SSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
S Y+D+ S +Q+ L +++TLYVGN+S++TTEEQ+YELFS+ G IKRIIMGLD+
Sbjct: 14 SGYKDRQSILSYEDQQAKLASSTTLYVGNMSFFTTEEQIYELFSRTGSIKRIIMGLDRMN 73
Query: 72 KTPCGFCFLE 81
KTPCGFCF+E
Sbjct: 74 KTPCGFCFVE 83
>gi|119192920|ref|XP_001247066.1| hypothetical protein CIMG_00837 [Coccidioides immitis RS]
gi|392863699|gb|EAS35532.2| nuclear cap-binding protein subunit 2 [Coccidioides immitis RS]
Length = 187
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 51/57 (89%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E E L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 50 EAEDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFVE 106
>gi|392577307|gb|EIW70436.1| hypothetical protein TREMEDRAFT_18663, partial [Tremella
mesenterica DSM 1558]
Length = 206
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M+ V+S SSYRD + R + +LL ++TLYVGNLS+YTTE Q+YE+FS C
Sbjct: 1 MSQVVSSLDVPSSYRDNRSELDRETERRLLARSTTLYVGNLSFYTTETQMYEVFSACARP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G +KRIIMGLD+++KTPCGF F+E
Sbjct: 61 EEGGGVKRIIMGLDRHQKTPCGFAFVE 87
>gi|452843109|gb|EME45044.1| hypothetical protein DOTSEDRAFT_70923 [Dothistroma septosporum
NZE10]
Length = 187
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 59/76 (77%)
Query: 6 SPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
+P+ + + RD+ ++ + E L+ +TLYVGNLS+YTTEEQ++ LFS CG+IKR++M
Sbjct: 33 NPNDDSTEDRDRDRSDNQPDIEDKLKHATTLYVGNLSFYTTEEQIHTLFSSCGEIKRLVM 92
Query: 66 GLDKYKKTPCGFCFLE 81
GLD++ KTPCGFCF+E
Sbjct: 93 GLDRFSKTPCGFCFVE 108
>gi|315050526|ref|XP_003174637.1| nuclear cap-binding protein subunit 2 [Arthroderma gypseum CBS
118893]
gi|311339952|gb|EFQ99154.1| nuclear cap-binding protein subunit 2 [Arthroderma gypseum CBS
118893]
Length = 167
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 57/67 (85%)
Query: 15 RDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
R++ +A+ + L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD+++KTP
Sbjct: 31 REREEDKPQADFDATLKEATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTP 90
Query: 75 CGFCFLE 81
CGFCF+E
Sbjct: 91 CGFCFVE 97
>gi|255935633|ref|XP_002558843.1| Pc13g04070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583463|emb|CAP91476.1| Pc13g04070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 178
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 15 RDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
RD+ + ++ L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTP
Sbjct: 31 RDEDEPQQEEKPDEKLKNATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFNKTP 90
Query: 75 CGFCFLE 81
CGFCF+E
Sbjct: 91 CGFCFVE 97
>gi|302903969|ref|XP_003048974.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729908|gb|EEU43261.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 176
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 45 LANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFSKTPCGFCFVE 96
>gi|343426290|emb|CBQ69821.1| probable nuclear cap binding protein subunit 2 [Sporisorium
reilianum SRZ2]
Length = 260
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELF------ 54
M+ ++ P SSYRD ++ EQ+ LR T+TLY+GNLS+YTTEEQ+YE+F
Sbjct: 1 MSHILDPLDAPSSYRDSRSSQNKHEQQAALRQTATLYLGNLSFYTTEEQIYEVFGRVASV 60
Query: 55 SKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S G IKRIIMGLD+ KTPCGF F+E
Sbjct: 61 SSGGGIKRIIMGLDRNTKTPCGFAFVE 87
>gi|336263214|ref|XP_003346387.1| hypothetical protein SMAC_05283 [Sordaria macrospora k-hell]
gi|380089899|emb|CCC12209.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 194
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ+YELFSKCG+IKR++MGLD+ +KTPCGFCF+E
Sbjct: 53 LKDATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRLQKTPCGFCFVE 104
>gi|346319665|gb|EGX89266.1| nuclear cap binding protein subunit 2 [Cordyceps militaris CM01]
Length = 172
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 49/56 (87%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
Q L +TLYVGNLS+YTTEEQ+YELF+KCG+IKR+IMGLD++ KTPCGFCF+E
Sbjct: 39 QPDPLADATTLYVGNLSFYTTEEQVYELFTKCGEIKRLIMGLDRFSKTPCGFCFVE 94
>gi|425766493|gb|EKV05102.1| Small subunit of nuclear cap-binding protein complex [Penicillium
digitatum Pd1]
gi|425775339|gb|EKV13617.1| Small subunit of nuclear cap-binding protein complex [Penicillium
digitatum PHI26]
Length = 197
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 55/67 (82%)
Query: 15 RDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
RD+ + + + L+ +TLYVGNLS+YTTEEQ++ELF+KCG++KR++MGLD++ KTP
Sbjct: 31 RDEEEPQQQEKADDKLKNATTLYVGNLSFYTTEEQIHELFAKCGEVKRLVMGLDRFNKTP 90
Query: 75 CGFCFLE 81
CGFCF+E
Sbjct: 91 CGFCFVE 97
>gi|408397109|gb|EKJ76259.1| hypothetical protein FPSE_03514 [Fusarium pseudograminearum
CS3096]
Length = 173
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS+YTTEEQ+YELF+KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 44 LANATTLYVGNLSFYTTEEQVYELFAKCGEIKRLVMGLDRFNKTPCGFCFVE 95
>gi|46122221|ref|XP_385664.1| hypothetical protein FG05488.1 [Gibberella zeae PH-1]
Length = 173
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS+YTTEEQ+YELF+KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 44 LANATTLYVGNLSFYTTEEQVYELFAKCGEIKRLVMGLDRFNKTPCGFCFVE 95
>gi|402077280|gb|EJT72629.1| nuclear cap-binding protein subunit 2 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 186
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS++TTEEQ+YELFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 42 LAKATTLYVGNLSFFTTEEQIYELFSKCGEIKRLVMGLDRFNKTPCGFCFVE 93
>gi|156033107|ref|XP_001585390.1| hypothetical protein SS1G_13629 [Sclerotinia sclerotiorum 1980]
gi|154699032|gb|EDN98770.1| hypothetical protein SS1G_13629 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 181
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR+IMGLD++ KTPCGFCF+E
Sbjct: 49 LKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPCGFCFVE 100
>gi|154315645|ref|XP_001557145.1| nuclear cap binding protein subunit 2 [Botryotinia fuckeliana
B05.10]
gi|347840058|emb|CCD54630.1| similar to nuclear cap binding protein subunit 2 [Botryotinia
fuckeliana]
Length = 181
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR+IMGLD++ KTPCGFCF+E
Sbjct: 49 LKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPCGFCFVE 100
>gi|303289110|ref|XP_003063843.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454911|gb|EEH52216.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 147
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
L+ Y+D+ F+GS E + LRT++TLYVGN+S++TTEEQ++ELF+K G ++ I+MGLDK
Sbjct: 11 LTQYKDRSFQGSMDEYLEKLRTSTTLYVGNVSFFTTEEQIWELFAKVGVLRMIVMGLDKN 70
Query: 71 KKTPCGFCFLE 81
KTPCGF F+E
Sbjct: 71 AKTPCGFSFVE 81
>gi|295660180|ref|XP_002790647.1| nuclear cap-binding protein subunit 2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226281522|gb|EEH37088.1| nuclear cap-binding protein subunit 2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 217
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 53/61 (86%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
G++ + L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+
Sbjct: 76 GTQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFV 135
Query: 81 E 81
E
Sbjct: 136 E 136
>gi|358398124|gb|EHK47482.1| hypothetical protein TRIATDRAFT_157468 [Trichoderma atroviride
IMI 206040]
Length = 177
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L +TLYVGNLS+YTTEEQ++ELFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 44 LANATTLYVGNLSFYTTEEQVHELFSKCGEIKRLVMGLDRFNKTPCGFCFVE 95
>gi|330803417|ref|XP_003289703.1| hypothetical protein DICPUDRAFT_154090 [Dictyostelium purpureum]
gi|325080213|gb|EGC33778.1| hypothetical protein DICPUDRAFT_154090 [Dictyostelium purpureum]
Length = 213
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 53/60 (88%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++ E +K + +ST+YVG LS+YTTEEQLYELFSKCG+IKRIIMGLD+ +KTPCGFCF+E
Sbjct: 20 TQDEFKKAIEKSSTIYVGYLSFYTTEEQLYELFSKCGEIKRIIMGLDRNQKTPCGFCFVE 79
>gi|239606356|gb|EEQ83343.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
ER-3]
gi|327353068|gb|EGE81925.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
ATCC 18188]
Length = 203
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 71 LKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFVE 122
>gi|238493741|ref|XP_002378107.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
gi|317157348|ref|XP_003190832.1| nuclear cap-binding protein subunit 2 [Aspergillus oryzae RIB40]
gi|220696601|gb|EED52943.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
Length = 177
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ++ELFSKCG++KR++MGLD++ KTPCGFCF+E
Sbjct: 44 LKNATTLYVGNLSFYTTEEQIHELFSKCGEVKRLVMGLDRFTKTPCGFCFVE 95
>gi|328877034|gb|EGG25397.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 200
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 50/55 (90%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+K + ++T+YVG LS+YTTEEQLYELFSKCG+IKRIIMGLD+ +KTPCGFCF+E
Sbjct: 25 QKAIEVSTTIYVGYLSFYTTEEQLYELFSKCGEIKRIIMGLDRLQKTPCGFCFVE 79
>gi|225678865|gb|EEH17149.1| nuclear cap-binding protein subunit 2 [Paracoccidioides
brasiliensis Pb03]
Length = 177
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 53/61 (86%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
G++ + L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+
Sbjct: 29 GTQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFV 88
Query: 81 E 81
E
Sbjct: 89 E 89
>gi|412985686|emb|CCO19132.1| predicted protein [Bathycoccus prasinos]
Length = 203
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
M + L+ Y+D+ F+G+ E LRT++TLYVGN+S++TTEEQ++ELF+ CG +
Sbjct: 1 MARLFLDQEPLTQYKDRRFEGNLEEYLDRLRTSTTLYVGNVSFFTTEEQIHELFTLCGPV 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
K+I MGLDK K TPCGF F+E
Sbjct: 61 KKITMGLDKQKMTPCGFTFVE 81
>gi|226293700|gb|EEH49120.1| nuclear cap-binding protein subunit 2 [Paracoccidioides
brasiliensis Pb18]
Length = 170
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 53/61 (86%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
G++ + L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+
Sbjct: 29 GTQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFV 88
Query: 81 E 81
E
Sbjct: 89 E 89
>gi|261190116|ref|XP_002621468.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
SLH14081]
gi|239591296|gb|EEQ73877.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
SLH14081]
Length = 177
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 52/61 (85%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
G + + L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+
Sbjct: 63 GPQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFV 122
Query: 81 E 81
E
Sbjct: 123 E 123
>gi|325188042|emb|CCA22585.1| elicitinlike protein putative [Albugo laibachii Nc14]
Length = 251
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 54/68 (79%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S EQ+ ++ +STLY+GNLS+YT+E QL ELFS+ G IKR+IMGLD++KKT
Sbjct: 23 YWDRKTYKSLEEQQSAIKQSSTLYIGNLSFYTSENQLCELFSRVGTIKRVIMGLDRFKKT 82
Query: 74 PCGFCFLE 81
PCGFCF+E
Sbjct: 83 PCGFCFVE 90
>gi|225559401|gb|EEH07684.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus
G186AR]
Length = 172
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 40 LKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFVE 91
>gi|154274135|ref|XP_001537919.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus
NAm1]
gi|150415527|gb|EDN10880.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus
NAm1]
gi|240282339|gb|EER45842.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus
H143]
gi|325088474|gb|EGC41784.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus
H88]
Length = 171
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 49/52 (94%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNLS+YTTEEQ++ELF+KCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 39 LKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFAKTPCGFCFVE 90
>gi|428174824|gb|EKX43717.1| hypothetical protein GUITHDRAFT_153153 [Guillardia theta
CCMP2712]
Length = 230
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 56/72 (77%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E + Y D+H + E + + ++ LY+GNLSY+TTE Q+YE FS+CG++KR+IMGLD+
Sbjct: 9 ERTPYFDRHSGMTYEEYHQAIEKSTCLYIGNLSYFTTEAQIYEFFSRCGEVKRVIMGLDR 68
Query: 70 YKKTPCGFCFLE 81
++KTPCGFCF+E
Sbjct: 69 FQKTPCGFCFVE 80
>gi|367005466|ref|XP_003687465.1| hypothetical protein TPHA_0J02110 [Tetrapisispora phaffii CBS
4417]
gi|357525769|emb|CCE65031.1| hypothetical protein TPHA_0J02110 [Tetrapisispora phaffii CBS
4417]
Length = 259
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/56 (69%), Positives = 48/56 (85%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
EQ + + T+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 38 EQLRESTKSGTIYVGNLSFYTSEEQIYELFSKCGFIKRIIMGLDRFKFTPCGFCFV 93
>gi|328766429|gb|EGF76483.1| hypothetical protein BATDEDRAFT_14710, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 156
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L ++TLY+GNLS++TTEEQ+YELFSKCG+IKRIIMGLD+ KKTPCGF F+E
Sbjct: 1 LEKSTTLYIGNLSFFTTEEQIYELFSKCGEIKRIIMGLDRIKKTPCGFSFVE 52
>gi|66807277|ref|XP_637361.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996750|sp|Q54KR9.1|NCBP2_DICDI RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|60465797|gb|EAL63873.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 234
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 29 LLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +ST+YVG LS+YTTEEQLYELFSKCG+IKRIIMGLD+ +KTPCGFCF+E
Sbjct: 27 AIDKSSTIYVGYLSFYTTEEQLYELFSKCGEIKRIIMGLDRNQKTPCGFCFVE 79
>gi|321257087|ref|XP_003193465.1| 20 kDa nuclear cap binding protein (ncbp) [Cryptococcus gattii
WM276]
gi|317459935|gb|ADV21678.1| 20 kDa nuclear cap binding protein (ncbp), putative [Cryptococcus
gattii WM276]
Length = 226
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V+ SSYRD + R + +LL +STLY+GNLS+YTTE Q+Y+LFS C
Sbjct: 1 MAQVVPSLDHPSSYRDSRSEIDRETERRLLAQSSTLYIGNLSFYTTETQMYQLFSTCAKP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ KTPCGF F+E
Sbjct: 61 EIGGGIKRIIMGLDRNTKTPCGFAFVE 87
>gi|156848818|ref|XP_001647290.1| hypothetical protein Kpol_1002p79 [Vanderwaltozyma polyspora DSM
70294]
gi|156117975|gb|EDO19432.1| hypothetical protein Kpol_1002p79 [Vanderwaltozyma polyspora DSM
70294]
Length = 209
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++T+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 46 SATIYVGNLSFYTSEEQIYELFSKCGSIKRIIMGLDRFKYTPCGFCFI 93
>gi|294917415|ref|XP_002778459.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239886859|gb|EER10254.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 231
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
++PS + Y D+ +R E L+ +STLYVGNLS+YTTEEQ+ ELFSKCG +K++
Sbjct: 8 LTPSTK---YYDKKSGLTREEWYDSLQRSSTLYVGNLSFYTTEEQIMELFSKCGKVKKVT 64
Query: 65 MGLDKYKKTPCGFCFLE 81
MGL+++KK+PCGFCF+E
Sbjct: 65 MGLNRFKKSPCGFCFVE 81
>gi|449298181|gb|EMC94198.1| hypothetical protein BAUCODRAFT_74746 [Baudoinia compniacensis
UAMH 10762]
Length = 178
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+ L + +TLYVGNLS+YTTEEQ++ LFSKCG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 42 EEKLSSATTLYVGNLSFYTTEEQIHALFSKCGEIKRLVMGLDRFTKTPCGFCFVE 96
>gi|453085264|gb|EMF13307.1| nuclear cap binding protein subunit 2 [Mycosphaerella populorum
SO2202]
Length = 177
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%)
Query: 16 DQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPC 75
D + + + E+ L+ +TLYVGNLS+YTTEEQ++ LFS CG+IKR++MGLD++ KTPC
Sbjct: 32 DGSARAASPDLEEKLQNATTLYVGNLSFYTTEEQIHSLFSTCGEIKRLVMGLDRFAKTPC 91
Query: 76 GFCFLE 81
GFCF+E
Sbjct: 92 GFCFVE 97
>gi|410074847|ref|XP_003955006.1| hypothetical protein KAFR_0A04360 [Kazachstania africana CBS
2517]
gi|372461588|emb|CCF55871.1| hypothetical protein KAFR_0A04360 [Kazachstania africana CBS
2517]
Length = 208
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 46/49 (93%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRI+MGLD++K TPCGFCF+
Sbjct: 45 VSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIVMGLDRFKFTPCGFCFV 93
>gi|444313691|ref|XP_004177503.1| hypothetical protein TBLA_0A01830 [Tetrapisispora blattae CBS
6284]
gi|387510542|emb|CCH57984.1| hypothetical protein TBLA_0A01830 [Tetrapisispora blattae CBS
6284]
Length = 228
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 46 SSTIYVGNLSFYTSEEQIYELFSKCGVIKRIIMGLDRFKFTPCGFCFV 93
>gi|190407783|gb|EDV11048.1| nuclear cap binding complex subunit [Saccharomyces cerevisiae
RM11-1a]
Length = 208
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>gi|365762733|gb|EHN04266.1| Cbc2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 208
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>gi|366993070|ref|XP_003676300.1| hypothetical protein NCAS_0D03580 [Naumovozyma castellii CBS
4309]
gi|342302166|emb|CCC69939.1| hypothetical protein NCAS_0D03580 [Naumovozyma castellii CBS
4309]
Length = 245
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/48 (77%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++T+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 46 SATIYVGNLSFYTSEEQIYELFSKCGFIKRIIMGLDRFKFTPCGFCFV 93
>gi|6325079|ref|NP_015147.1| Cbc2p [Saccharomyces cerevisiae S288c]
gi|74676483|sp|Q08920.1|NCBP2_YEAST RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|6649544|gb|AAF21454.1|U39665_1 CBP20 homolog [Saccharomyces cerevisiae]
gi|1370375|emb|CAA97885.1| SAE1 [Saccharomyces cerevisiae]
gi|51013349|gb|AAT92968.1| YPL178W [Saccharomyces cerevisiae]
gi|207340672|gb|EDZ68953.1| YPL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274244|gb|EEU09152.1| Cbc2p [Saccharomyces cerevisiae JAY291]
gi|285815364|tpg|DAA11256.1| TPA: Cbc2p [Saccharomyces cerevisiae S288c]
gi|392296259|gb|EIW07362.1| Cbc2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 208
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>gi|151942621|gb|EDN60967.1| nuclear cap binding complex subunit [Saccharomyces cerevisiae
YJM789]
gi|259149978|emb|CAY86781.1| Cbc2p [Saccharomyces cerevisiae EC1118]
gi|323302684|gb|EGA56490.1| Cbc2p [Saccharomyces cerevisiae FostersB]
gi|323306947|gb|EGA60231.1| Cbc2p [Saccharomyces cerevisiae FostersO]
gi|323346135|gb|EGA80425.1| Cbc2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323351960|gb|EGA84499.1| Cbc2p [Saccharomyces cerevisiae VL3]
gi|349581640|dbj|GAA26797.1| K7_Cbc2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 208
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>gi|323335299|gb|EGA76588.1| Cbc2p [Saccharomyces cerevisiae Vin13]
Length = 208
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>gi|50285625|ref|XP_445241.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524545|emb|CAG58147.1| unnamed protein product [Candida glabrata]
Length = 236
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYVGNLSFYTSEEQIYELFSKCGFIKRIIMGLDRFKFTPCGFCFI 92
>gi|45198469|ref|NP_985498.1| AFL050Wp [Ashbya gossypii ATCC 10895]
gi|74693047|sp|Q754W7.1|NCBP2_ASHGO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|44984420|gb|AAS53322.1| AFL050Wp [Ashbya gossypii ATCC 10895]
gi|374108727|gb|AEY97633.1| FAFL050Wp [Ashbya gossypii FDAG1]
Length = 218
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 47/49 (95%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T++T+YVGNLS+YT+EEQLYELFSKCG I++IIMGLD++K TPCGFCF+
Sbjct: 44 TSATIYVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTPCGFCFI 92
>gi|452984797|gb|EME84554.1| hypothetical protein MYCFIDRAFT_214779 [Pseudocercospora fijiensis
CIRAD86]
Length = 178
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 16 DQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPC 75
D+ + + E+ L +TLYVGNLS+YTTEEQ++ LFS CG+IKR++MGLD++ KTPC
Sbjct: 36 DESKRAPSPDLEEKLANATTLYVGNLSFYTTEEQIHSLFSTCGEIKRLVMGLDRFAKTPC 95
Query: 76 GFCFLE 81
GFCF+E
Sbjct: 96 GFCFVE 101
>gi|323331161|gb|EGA72579.1| Cbc2p [Saccharomyces cerevisiae AWRI796]
Length = 208
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>gi|71021555|ref|XP_761008.1| hypothetical protein UM04861.1 [Ustilago maydis 521]
gi|46100928|gb|EAK86161.1| hypothetical protein UM04861.1 [Ustilago maydis 521]
Length = 211
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M+ ++ P SSYRD + SR EQ++ LR TSTLY+GNLS+YTTEEQ+YE+F +
Sbjct: 1 MSHILEPLDAPSSYRDSRSQSSRQEQQQALRQTSTLYLGNLSFYTTEEQIYEVFGRVSSV 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ KTPCGF F+E
Sbjct: 61 STGGGIKRIIMGLDRNTKTPCGFAFVE 87
>gi|210076238|ref|XP_504544.2| YALI0E29293p [Yarrowia lipolytica]
gi|199426969|emb|CAG80148.2| YALI0E29293p [Yarrowia lipolytica CLIB122]
Length = 170
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Query: 12 SSYRDQHFKGSRAEQEKL--LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
SSY + + SR +E L L T+TLYVGNLS++TTEEQ++ELF+K +K+IIMGLD+
Sbjct: 23 SSYVLRQARRSRQGEEDLAALDVTTTLYVGNLSFFTTEEQIHELFTKIAKVKKIIMGLDR 82
Query: 70 YKKTPCGFCFLE 81
Y+KTPCGFCF+E
Sbjct: 83 YQKTPCGFCFVE 94
>gi|403216390|emb|CCK70887.1| hypothetical protein KNAG_0F02200 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 50/56 (89%), Gaps = 2/56 (3%)
Query: 27 EKLLRTT--STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+L R+T +T+YVGNLS+YT+EEQLYELFSKCG IKRIIMGLD++K TPCGF F+
Sbjct: 37 EELRRSTKSATIYVGNLSFYTSEEQLYELFSKCGTIKRIIMGLDRFKFTPCGFSFI 92
>gi|134115853|ref|XP_773409.1| hypothetical protein CNBI2540 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256034|gb|EAL18762.1| hypothetical protein CNBI2540 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 226
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC--- 57
M V+ SSYRD + R + +LL +STLY+GNLS+YTTE Q+Y+LFS C
Sbjct: 1 MAQVVPCLDHPSSYRDSRSEIDRETERRLLALSSTLYIGNLSFYTTETQMYQLFSTCAKP 60
Query: 58 ---GDIKRIIMGLDKYKKTPCGFCFLE 81
G IKRIIMGLD+ KTPCGF F+E
Sbjct: 61 EIGGGIKRIIMGLDRNTKTPCGFAFVE 87
>gi|401623287|gb|EJS41391.1| cbc2p [Saccharomyces arboricola H-6]
Length = 209
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+Y GNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYAGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>gi|19113206|ref|NP_596414.1| nuclear cap-binding complex small subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698255|sp|Q9P383.1|NCBP2_SCHPO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|9453827|emb|CAB99394.1| nuclear cap-binding complex small subunit (predicted)
[Schizosaccharomyces pombe]
Length = 182
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 48/52 (92%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++ ++ +YVGNLS+YTTEEQ+Y LFSKCG+I+RIIMG+D++ KTPCGFCF+E
Sbjct: 28 VKQSNCVYVGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGFCFVE 79
>gi|367015406|ref|XP_003682202.1| hypothetical protein TDEL_0F01800 [Torulaspora delbrueckii]
gi|359749864|emb|CCE92991.1| hypothetical protein TDEL_0F01800 [Torulaspora delbrueckii]
Length = 219
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 46/48 (95%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++T+YVGNLS+YT+EEQ+YELFSKCG IKRI+MGLD++K TPCGFCF+
Sbjct: 45 SATVYVGNLSFYTSEEQIYELFSKCGTIKRIVMGLDRFKFTPCGFCFV 92
>gi|365758094|gb|EHM99955.1| Cbc2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|401842435|gb|EJT44647.1| CBC2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 209
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ST+Y GNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 45 SSTIYAGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>gi|363749183|ref|XP_003644809.1| hypothetical protein Ecym_2246 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888442|gb|AET37992.1| Hypothetical protein Ecym_2246 [Eremothecium cymbalariae
DBVPG#7215]
Length = 236
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++T+YVGNLS+YT+EEQLYELF+KCG I+RIIMGLD++K TPCGFCF+
Sbjct: 44 VSATIYVGNLSFYTSEEQLYELFNKCGTIERIIMGLDRFKFTPCGFCFI 92
>gi|301761424|ref|XP_002916135.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Ailuropoda
melanoleuca]
Length = 226
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
+VELS YRD F+G EQEKLL+ L YTTE +YE FSK G IK+I+MG
Sbjct: 19 NVELSQYRDPPFRGDNEEQEKLLKKRCRFDARKLPVYTTEGHIYEFFSKSGSIKKIVMGP 78
Query: 68 DKYKKTPCGFCFLE 81
DK K+T CGFCF+E
Sbjct: 79 DKMKRTACGFCFVE 92
>gi|254586545|ref|XP_002498840.1| ZYRO0G19844p [Zygosaccharomyces rouxii]
gi|238941734|emb|CAR29907.1| ZYRO0G19844p [Zygosaccharomyces rouxii]
Length = 218
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 45/48 (93%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ T+YVGNLS+YT+EEQ+YELFSKCG I+RI+MGLD++K TPCGFCF+
Sbjct: 45 SGTVYVGNLSFYTSEEQIYELFSKCGTIQRIVMGLDRFKFTPCGFCFV 92
>gi|328853553|gb|EGG02691.1| hypothetical protein MELLADRAFT_38424 [Melampsora larici-populina
98AG31]
Length = 209
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 49/60 (81%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S EQ+ L +ST+YVGNLS++TTEEQ++ELFSK IKRIIMGLD+ KTPCGFCF+E
Sbjct: 32 SYTEQQSELSKSSTVYVGNLSFFTTEEQIFELFSKIAPIKRIIMGLDRNSKTPCGFCFVE 91
>gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri]
gi|116054781|emb|CAL56858.1| putative endonuclease (ISS), partial [Ostreococcus tauri]
Length = 820
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 53/71 (74%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
L+ Y+D+ F+G+ LR ++TLYVGNLS+YT+E Q LF++CG ++RI+ GLD+
Sbjct: 657 LTQYKDRAFEGTIEAYLDALRASATLYVGNLSFYTSETQARALFARCGVVRRIVFGLDRE 716
Query: 71 KKTPCGFCFLE 81
++TPCGF F+E
Sbjct: 717 RRTPCGFAFVE 727
>gi|218191155|gb|EEC73582.1| hypothetical protein OsI_08043 [Oryza sativa Indica Group]
Length = 127
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 23 RAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ E E L+ + T+YVGN+S+YTTEEQ YELFS+ G+I++IIMGLDK KTPCGFCF+
Sbjct: 6 KEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFI 63
>gi|213403115|ref|XP_002172330.1| nuclear cap-binding protein subunit 2 [Schizosaccharomyces
japonicus yFS275]
gi|212000377|gb|EEB06037.1| nuclear cap-binding protein subunit 2 [Schizosaccharomyces
japonicus yFS275]
Length = 181
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 47/52 (90%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++ + +YVGNLS+YTTE+Q+Y LFSKCG+IKRIIMG+D++ KTPCGFCF+E
Sbjct: 28 VKESCCVYVGNLSFYTTEDQIYALFSKCGEIKRIIMGIDRFTKTPCGFCFVE 79
>gi|365990227|ref|XP_003671943.1| hypothetical protein NDAI_0I01310 [Naumovozyma dairenensis CBS
421]
gi|343770717|emb|CCD26700.1| hypothetical protein NDAI_0I01310 [Naumovozyma dairenensis CBS
421]
Length = 277
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 44/46 (95%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+YVGNLS+YT+EEQ+YELFSKCG IKRIIMGLD++K TPCGFCF+
Sbjct: 47 TIYVGNLSFYTSEEQIYELFSKCGFIKRIIMGLDRFKFTPCGFCFI 92
>gi|281200605|gb|EFA74823.1| RNA-binding region RNP-1 domain-containing protein
[Polysphondylium pallidum PN500]
Length = 202
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 47/52 (90%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ ++T+YVG LS+YTTEEQLYELFSKCG+IK+IIMGLD+ KTPCGFCF+E
Sbjct: 28 IERSTTVYVGFLSFYTTEEQLYELFSKCGEIKKIIMGLDRIHKTPCGFCFVE 79
>gi|406602546|emb|CCH45862.1| Nuclear cap-binding protein subunit 2 [Wickerhamomyces ciferrii]
Length = 251
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++T+YVGNLS+YTTEEQ+YELFSK G IK+IIMGLD++ TPCGFCF+
Sbjct: 45 SATIYVGNLSFYTTEEQIYELFSKVGPIKQIIMGLDRFNYTPCGFCFV 92
>gi|281350701|gb|EFB26285.1| hypothetical protein PANDA_004179 [Ailuropoda melanoleuca]
Length = 145
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
+VELS YRD F+G EQEKLL+ L YTTE +YE FSK G IK+I+MG
Sbjct: 7 NVELSQYRDPPFRGDNEEQEKLLKKRCRFDARKLPVYTTEGHIYEFFSKSGSIKKIVMGP 66
Query: 68 DKYKKTPCGFCFLE 81
DK K+T CGFCF+E
Sbjct: 67 DKMKRTACGFCFVE 80
>gi|255730519|ref|XP_002550184.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132141|gb|EER31699.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 206
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ T+YVGNLS++TTEEQ++ELFSKCG I RIIMGLD+ K TPCGFCF+
Sbjct: 38 TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFV 86
>gi|238879057|gb|EEQ42695.1| hypothetical protein CAWG_00916 [Candida albicans WO-1]
Length = 224
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ T+YVGNLS++TTEEQ++ELFSKCG I RIIMGLD+ K TPCGFCF+
Sbjct: 38 TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFV 86
>gi|68484939|ref|XP_713608.1| hypothetical protein CaO19.8383 [Candida albicans SC5314]
gi|68485014|ref|XP_713573.1| hypothetical protein CaO19.763 [Candida albicans SC5314]
gi|46435078|gb|EAK94468.1| hypothetical protein CaO19.763 [Candida albicans SC5314]
gi|46435114|gb|EAK94503.1| hypothetical protein CaO19.8383 [Candida albicans SC5314]
Length = 224
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ T+YVGNLS++TTEEQ++ELFSKCG I RIIMGLD+ K TPCGFCF+
Sbjct: 38 TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFV 86
>gi|255719652|ref|XP_002556106.1| KLTH0H05214p [Lachancea thermotolerans]
gi|238942072|emb|CAR30244.1| KLTH0H05214p [Lachancea thermotolerans CBS 6340]
Length = 200
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 49/56 (87%), Gaps = 2/56 (3%)
Query: 27 EKLLRT--TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E L R+ ++T+YVGNLS+YT+EEQ+YELFSK G IKRIIMGLD++K TPCGFCF+
Sbjct: 37 EDLRRSMRSATIYVGNLSFYTSEEQIYELFSKSGVIKRIIMGLDRFKFTPCGFCFV 92
>gi|241948801|ref|XP_002417123.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223640461|emb|CAX44713.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 224
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ T+YVGNLS++TTEEQ++ELFSKCG I RIIMGLD+ K TPCGFCF+
Sbjct: 38 TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFV 86
>gi|50304093|ref|XP_451996.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641128|emb|CAH02389.1| KLLA0B10472p [Kluyveromyces lactis]
Length = 198
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 44/46 (95%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+YVGNLS+YT+EEQ+YELFSKCG IK+IIMGLD++K TPCGFCF+
Sbjct: 48 TVYVGNLSFYTSEEQIYELFSKCGTIKKIIMGLDRFKFTPCGFCFI 93
>gi|344231941|gb|EGV63820.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ T+YVGNLS +TTEEQL+ELFSKCG+I RIIMGLD+ K TPCGFCF+
Sbjct: 40 TSKTIYVGNLSNFTTEEQLFELFSKCGNIDRIIMGLDRNKLTPCGFCFV 88
>gi|403158869|ref|XP_003319546.2| hypothetical protein PGTG_01720 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166496|gb|EFP75127.2| hypothetical protein PGTG_01720 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 196
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 9/69 (13%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
SY DQ + SR +ST+YVGNLS++TTEEQ++ELFSK IKRIIMGLD+ K
Sbjct: 22 SYEDQQLQLSR---------SSTVYVGNLSFFTTEEQIFELFSKAALIKRIIMGLDRNSK 72
Query: 73 TPCGFCFLE 81
TPCGFCF+E
Sbjct: 73 TPCGFCFVE 81
>gi|344304827|gb|EGW35059.1| hypothetical protein SPAPADRAFT_131749 [Spathaspora passalidarum
NRRL Y-27907]
Length = 209
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ T+YVGNLS++TTEEQ++ELFSKCG I RIIMGLD+ K TPCGFCF+
Sbjct: 41 TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFV 89
>gi|342879103|gb|EGU80377.1| hypothetical protein FOXB_09125 [Fusarium oxysporum Fo5176]
Length = 186
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 13/69 (18%)
Query: 26 QEKLLRTTSTLYVGNL-------------SYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
Q L +TLYVGNL S+YTTEEQ+YELF+KCG+IKR++MGLD++ K
Sbjct: 40 QADPLANATTLYVGNLDQLHKADFHRANRSFYTTEEQVYELFAKCGEIKRLVMGLDRFNK 99
Query: 73 TPCGFCFLE 81
TPCGFCF+E
Sbjct: 100 TPCGFCFVE 108
>gi|388580502|gb|EIM20816.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 175
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD- 59
M+ VI P S+Y+D + +Q ++L ++TLY GNLS+YTTEEQ+YELF++
Sbjct: 1 MSDVIQPLDGPSTYKDTRSRIDPEKQREMLERSTTLYCGNLSFYTTEEQIYELFARVASG 60
Query: 60 --IKRIIMGLDKYKKTPCGFCFLE 81
IKRIIMGLD+ K PCGF F+E
Sbjct: 61 QGIKRIIMGLDRNTKHPCGFAFVE 84
>gi|290973266|ref|XP_002669370.1| predicted protein [Naegleria gruberi]
gi|284082916|gb|EFC36626.1| predicted protein [Naegleria gruberi]
Length = 358
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 49/61 (80%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
G+ + E+ L +ST+YV NLS+YT EEQ+YELF KCG++KR++MGL++ TPCGFCF+
Sbjct: 33 GNEEDFERALSQSSTIYVENLSFYTKEEQIYELFEKCGEVKRVVMGLNRNTLTPCGFCFV 92
Query: 81 E 81
E
Sbjct: 93 E 93
>gi|299115883|emb|CBN75892.1| nuclear cap-binding protein subunit 2 [Ectocarpus siliculosus]
Length = 196
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI 60
MT ++ Y D+ S ++ L+ +STLYVGNLS+YT E Q+Y LF + G +
Sbjct: 1 MTEMLDFGWSERPYWDRKNWSSLEAYKEALKKSSTLYVGNLSFYTQESQIYALFDQVGAV 60
Query: 61 KRIIMGLDKYKKTPCGFCFLE 81
+R+IMGLD+ KK+PCGFCF+E
Sbjct: 61 RRVIMGLDRVKKSPCGFCFVE 81
>gi|150951548|ref|XP_001387884.2| small subunit of the nuclear mRNA cap-binding protein complex CBC
[Scheffersomyces stipitis CBS 6054]
gi|149388685|gb|EAZ63861.2| small subunit of the nuclear mRNA cap-binding protein complex
CBC, partial [Scheffersomyces stipitis CBS 6054]
Length = 167
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ T+YVGNLS++TTEEQ++ELFSKCG I RIIMGLD+ K TPCGFCF+
Sbjct: 41 SKTVYVGNLSHFTTEEQIHELFSKCGSIDRIIMGLDRNKLTPCGFCFV 88
>gi|190348560|gb|EDK41032.2| hypothetical protein PGUG_05130 [Meyerozyma guilliermondii ATCC
6260]
Length = 198
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 44/48 (91%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ T+YVGNLS++TTEEQ++ELFSKCG I RIIMGLD+++ TPCGFCF+
Sbjct: 41 SKTVYVGNLSHFTTEEQVHELFSKCGRIDRIIMGLDRHRLTPCGFCFV 88
>gi|294656317|ref|XP_458582.2| DEHA2D02618p [Debaryomyces hansenii CBS767]
gi|199431377|emb|CAG86716.2| DEHA2D02618p [Debaryomyces hansenii CBS767]
Length = 225
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 43/48 (89%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ T+YVGNLS++T+EEQ++ELFSKCG I RIIMGLD+ K TPCGFCF+
Sbjct: 41 SKTVYVGNLSHFTSEEQIHELFSKCGTIDRIIMGLDRNKLTPCGFCFV 88
>gi|354543799|emb|CCE40521.1| hypothetical protein CPAR2_105570 [Candida parapsilosis]
Length = 216
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
AE E+ + T+ T+YVGNLS++TTEEQ++ELF KCG I +IIMGLD+ K TPCGFCF+
Sbjct: 31 AELERAM-TSRTVYVGNLSHFTTEEQIHELFMKCGAIDKIIMGLDRNKLTPCGFCFV 86
>gi|405119689|gb|AFR94461.1| 20 kda nuclear cap binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 210
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 6/66 (9%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC------GDIKRIIMGLDKYKKTPC 75
R + +LL +STLY+GNLS+YTTE Q+Y+LFS C G IKRIIMGLD+ KTPC
Sbjct: 6 DRETERRLLAQSSTLYIGNLSFYTTETQMYQLFSTCAKPEIGGGIKRIIMGLDRNTKTPC 65
Query: 76 GFCFLE 81
GF F+E
Sbjct: 66 GFAFVE 71
>gi|448097632|ref|XP_004198719.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
gi|359380141|emb|CCE82382.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
Length = 188
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 7/76 (9%)
Query: 6 SPSVELSSYRDQHFKG-SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
SP + + R Q+F+ S+A K T+YVGNLS++TTEEQ++ELFS CG I RII
Sbjct: 19 SPYLIKKAVRRQNFENLSKAMHSK------TVYVGNLSHFTTEEQIHELFSSCGTIDRII 72
Query: 65 MGLDKYKKTPCGFCFL 80
MGLD+ K TPCGFCF+
Sbjct: 73 MGLDRNKLTPCGFCFV 88
>gi|448101474|ref|XP_004199569.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
gi|359380991|emb|CCE81450.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
Length = 187
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 7/76 (9%)
Query: 6 SPSVELSSYRDQHFKG-SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
SP + + R Q+F+ S+A K T+YVGNLS++TTEEQ++ELFS CG I RII
Sbjct: 19 SPYLIKKAVRRQNFENLSKAMHSK------TVYVGNLSHFTTEEQIHELFSSCGTIDRII 72
Query: 65 MGLDKYKKTPCGFCFL 80
MGLD+ K TPCGFCF+
Sbjct: 73 MGLDRNKLTPCGFCFV 88
>gi|260950073|ref|XP_002619333.1| hypothetical protein CLUG_00492 [Clavispora lusitaniae ATCC
42720]
gi|238846905|gb|EEQ36369.1| hypothetical protein CLUG_00492 [Clavispora lusitaniae ATCC
42720]
Length = 194
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 43/48 (89%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ T+YVGNL+++TTEEQ++ELFSKCG I RIIMGLD+ K TPCGFCF+
Sbjct: 41 SKTVYVGNLTHFTTEEQIHELFSKCGTIDRIIMGLDRNKLTPCGFCFV 88
>gi|146414409|ref|XP_001483175.1| hypothetical protein PGUG_05130 [Meyerozyma guilliermondii ATCC
6260]
Length = 198
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 43/48 (89%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ T+YVGNLS++TTEEQ++ELF KCG I RIIMGLD+++ TPCGFCF+
Sbjct: 41 SKTVYVGNLSHFTTEEQVHELFLKCGRIDRIIMGLDRHRLTPCGFCFV 88
>gi|448517553|ref|XP_003867824.1| Cbc2 protein [Candida orthopsilosis Co 90-125]
gi|380352163|emb|CCG22387.1| Cbc2 protein [Candida orthopsilosis]
Length = 216
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ T+YVGNLS++TTEEQ++ELF KCG I +IIMGLD+ K TPCGFCF+
Sbjct: 38 TSRTVYVGNLSHFTTEEQIHELFMKCGAIDKIIMGLDRNKLTPCGFCFV 86
>gi|145356920|ref|XP_001422671.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582914|gb|ABP00988.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
L+ Y+D+ F G+ E LR ++TLYVGN+S+YTTE Q++ LF G ++ I++GLD
Sbjct: 11 LTQYKDRRFNGTLDEYLDRLRASTTLYVGNVSFYTTENQMHALFRSVGVVRAIVVGLDSA 70
Query: 71 KKTPCGFCFLE 81
++TPCGF F+E
Sbjct: 71 RRTPCGFAFVE 81
>gi|116208124|ref|XP_001229871.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183952|gb|EAQ91420.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 164
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 15/69 (21%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
S RDQ GS +E +S+YTTEEQ+YELFSKCG+IKR++MGLD++ K
Sbjct: 23 SVRDQTAAGSHSE---------------MSFYTTEEQVYELFSKCGEIKRLVMGLDRFNK 67
Query: 73 TPCGFCFLE 81
TPCGFCF+E
Sbjct: 68 TPCGFCFVE 76
>gi|378755337|gb|EHY65364.1| nuclear cap-binding protein subunit 2 [Nematocida sp. 1 ERTm2]
Length = 168
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ + G+ + K L T+ T+YVGNLS TTE QLY LFS+CG IKR+IMGLD K T
Sbjct: 40 YFDRRYTGTEDDYFKELLTSGTIYVGNLSKKTTEAQLYTLFSQCGRIKRVIMGLDAKKYT 99
Query: 74 PCGFCFLE 81
PCGF F+
Sbjct: 100 PCGFAFVH 107
>gi|328706453|ref|XP_003243101.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706455|ref|XP_003243102.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 210
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
+V LS Y D FKG+R E K L ++T+YVGNL+ +TE +++LFSK G IK IIMGL
Sbjct: 81 NVGLSKYFDCKFKGTRTEYSKKLEESTTVYVGNLNLLSTEADVHKLFSKAGKIKTIIMGL 140
Query: 68 DKYKKTPCGFCFLE 81
DK P GFCF+E
Sbjct: 141 DKQTLCPGGFCFVE 154
>gi|160331123|ref|XP_001712269.1| ncbP2 [Hemiselmis andersenii]
gi|159765716|gb|ABW97944.1| ncbP2 [Hemiselmis andersenii]
Length = 143
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 44/50 (88%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++T+YVGNLS++T EEQ++ELF + G+IKRII+GL++Y TPCGFCF+E
Sbjct: 34 NSNTVYVGNLSFHTREEQIWELFFRIGNIKRIIIGLNRYNYTPCGFCFIE 83
>gi|320580051|gb|EFW94274.1| nuclear cap binding complex subunit [Ogataea parapolymorpha DL-1]
Length = 239
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++ST+Y+G LS+ TTEEQL+ELFS CG I RIIMGLDK+K TP GFCF+
Sbjct: 47 SSSTVYIGKLSFDTTEEQLFELFSNCGTIVRIIMGLDKHKLTPTGFCFI 95
>gi|387592249|gb|EIJ87273.1| nuclear cap-binding protein subunit 2 [Nematocida parisii ERTm3]
gi|387597410|gb|EIJ95030.1| nuclear cap-binding protein subunit 2 [Nematocida parisii ERTm1]
Length = 149
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ + G+ + K L T+ T+YVGNLS TE+QLY LFS+CG IKR+I+GLD K T
Sbjct: 21 YFDKRYTGTEDDYFKELLTSGTIYVGNLSKKITEDQLYTLFSQCGKIKRVIIGLDAKKFT 80
Query: 74 PCGFCFLE 81
PCGF F++
Sbjct: 81 PCGFAFVQ 88
>gi|72390047|ref|XP_845318.1| nuclear cap binding protein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62359293|gb|AAX79735.1| nuclear cap binding protein, putative [Trypanosoma brucei]
gi|70801853|gb|AAZ11759.1| nuclear cap binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 187
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
QE+L ++T T+YVGNLS+YTTE+Q++E FS+CG I+ ++MGL + +TPCGFCF+
Sbjct: 35 QEQLNKST-TVYVGNLSFYTTEDQIWEHFSRCGHIRDLVMGLSEVTRTPCGFCFV 88
>gi|261328713|emb|CBH11691.1| nuclear cap binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 187
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
QE+L ++T T+YVGNLS+YTTE+Q++E FS+CG I+ ++MGL + +TPCGFCF+
Sbjct: 35 QEQLNKST-TVYVGNLSFYTTEDQIWEHFSRCGHIRDLVMGLSEVTRTPCGFCFV 88
>gi|149244846|ref|XP_001526966.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449360|gb|EDK43616.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 209
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ T+YVGNLS++TTEEQ++ELF K G I +IIMGLD+ K TPCGFCF+
Sbjct: 38 TSRTVYVGNLSHFTTEEQIHELFMKSGPIDKIIMGLDRNKLTPCGFCFV 86
>gi|403371443|gb|EJY85602.1| Nuclear cap-binding protein subunit 2 [Oxytricha trifallax]
Length = 248
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 12 SSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
S Y D+ S+ + ++ L ++TLYVGNLS+YT+E QL E F CG++ +IMGL++ K
Sbjct: 16 SIYFDKRSGLSQDQYKEKLSNSTTLYVGNLSFYTSETQLLEFFQLCGEVVNLIMGLNREK 75
Query: 72 KTPCGFCFLE 81
K PCGFCF+E
Sbjct: 76 KQPCGFCFVE 85
>gi|146093580|ref|XP_001466901.1| putative nuclear cap binding protein [Leishmania infantum JPCM5]
gi|398019212|ref|XP_003862770.1| nuclear cap binding protein, putative [Leishmania donovani]
gi|134071265|emb|CAM69950.1| putative nuclear cap binding protein [Leishmania infantum JPCM5]
gi|322501001|emb|CBZ36078.1| nuclear cap binding protein, putative [Leishmania donovani]
Length = 188
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 14/91 (15%)
Query: 1 MTTVISPSVELSSYRDQH-----------FKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQ 49
M++ + +V Y D+H F+ R EQ L ++T+YVGNLS+YTTEEQ
Sbjct: 1 MSSDLVDTVPRMEYVDRHELLRSLLTTEEFRERRQEQ---LNYSATVYVGNLSFYTTEEQ 57
Query: 50 LYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+Y FS CG I+ I+MGL++ + PCGFCF+
Sbjct: 58 VYNHFSPCGHIRDIVMGLNEATRCPCGFCFV 88
>gi|154341487|ref|XP_001566695.1| putative nuclear cap binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064020|emb|CAM40211.1| putative nuclear cap binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 188
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Query: 17 QHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCG 76
+ F+ R EQ L ++T+YVGNLS+YTTEEQLY FS CG I+ I+MGL++ + PCG
Sbjct: 28 EEFQERRQEQ---LNYSTTVYVGNLSFYTTEEQLYSHFSPCGHIRDIVMGLNEATRCPCG 84
Query: 77 FCFL 80
FCF+
Sbjct: 85 FCFV 88
>gi|401425433|ref|XP_003877201.1| putative nuclear cap binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493446|emb|CBZ28734.1| putative nuclear cap binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 188
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Query: 17 QHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCG 76
+ F+ R EQ L ++T+YVGNLS+YTTEEQ+Y FS CG ++ I+MGL++ ++PCG
Sbjct: 28 EEFRERRQEQ---LNYSTTVYVGNLSFYTTEEQVYNHFSPCGHVRDIVMGLNEETRSPCG 84
Query: 77 FCFL 80
FCF+
Sbjct: 85 FCFV 88
>gi|71416346|ref|XP_810208.1| nuclear cap binding protein [Trypanosoma cruzi strain CL Brener]
gi|70874706|gb|EAN88357.1| nuclear cap binding protein, putative [Trypanosoma cruzi]
Length = 188
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
QE+L R+T T+YVGNLS+YTTE Q++E F+ CG ++ ++MGL++ +TPCGFCF+
Sbjct: 35 QEQLERST-TVYVGNLSFYTTEGQIWEHFASCGHVRDVVMGLNEATRTPCGFCFV 88
>gi|342181442|emb|CCC90921.1| putative nuclear cap binding protein [Trypanosoma congolense
IL3000]
gi|343476365|emb|CCD12517.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 187
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
L ++T+YVGNLS+YTTEEQ++E FS CG ++ ++MGL +TPCGFCF+
Sbjct: 38 LDKSTTVYVGNLSFYTTEEQIWEYFSGCGHVRDVVMGLSDVTRTPCGFCFI 88
>gi|385303244|gb|EIF47332.1| cbc2p [Dekkera bruxellensis AWRI1499]
Length = 341
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 42/49 (85%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+++T+Y+G L++ TTEEQL+ELF+ CG IK+IIMGLDK K TP GFCF+
Sbjct: 46 SSATIYIGGLTFTTTEEQLFELFNDCGSIKQIIMGLDKKKLTPAGFCFI 94
>gi|403340450|gb|EJY69510.1| Nuclear cap-binding protein subunit 2 [Oxytricha trifallax]
Length = 541
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDI-KRIIMGLDKYK 71
+Y D+ ++ E + ++T++TLYVGNLS+YT E+QL FS C I R+IMGL+
Sbjct: 16 TYYDRKQGLTQEEYFQKIKTSTTLYVGNLSFYTREDQLLNYFSLCSQILPRLIMGLNNQT 75
Query: 72 KTPCGFCFLE 81
KTPCGFCF+E
Sbjct: 76 KTPCGFCFVE 85
>gi|124505443|ref|XP_001351463.1| nuclear cap-binding protein, putative [Plasmodium falciparum 3D7]
gi|23498221|emb|CAD49192.1| nuclear cap-binding protein, putative [Plasmodium falciparum 3D7]
Length = 234
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E + +R + T+Y+GNLS YTT++Q+YE SK GD++ IIMGL + +K+PCGFCF+
Sbjct: 25 EWQDKIRESKTVYIGNLSIYTTQQQIYEHMSKAGDVENIIMGLHRTEKSPCGFCFV 80
>gi|430812623|emb|CCJ29971.1| unnamed protein product [Pneumocystis jirovecii]
Length = 173
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%), Gaps = 8/70 (11%)
Query: 12 SSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
S+Y D++ + R+ ++ L +ST + YTTEEQ+YELFSKCG++KRIIMGLD++
Sbjct: 11 STYVDRYSR--RSNKDPSLNNSSTFF------YTTEEQIYELFSKCGEVKRIIMGLDRFS 62
Query: 72 KTPCGFCFLE 81
KT CGFCF+E
Sbjct: 63 KTYCGFCFVE 72
>gi|336469743|gb|EGO57905.1| hypothetical protein NEUTE1DRAFT_146404 [Neurospora tetrasperma
FGSC 2508]
Length = 187
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%), Gaps = 7/52 (13%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+ +TLYVGNL Q+YELFSKCG+IKR++MGLD+ +KTPCGFCF+E
Sbjct: 53 LKDATTLYVGNL-------QVYELFSKCGEIKRLVMGLDRLQKTPCGFCFVE 97
>gi|340054058|emb|CCC48352.1| putative nuclear cap binding protein, fragment, partial
[Trypanosoma vivax Y486]
Length = 184
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 44/55 (80%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+++ L ++T+YVGNLS+YTTEEQ++ FS CG I+ ++MGL + +TPCGFCF+
Sbjct: 34 RQQQLNKSTTVYVGNLSFYTTEEQIWVHFSSCGHIRDLVMGLSEATRTPCGFCFV 88
>gi|121698319|ref|XP_001267782.1| small subunit of nuclear cap-binding protein complex [Aspergillus
clavatus NRRL 1]
gi|119395924|gb|EAW06356.1| small subunit of nuclear cap-binding protein complex [Aspergillus
clavatus NRRL 1]
Length = 138
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 39/40 (97%)
Query: 42 SYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S+YTTEEQ++ELFSKCG++KR++MGLD++ KTPCGFCF+E
Sbjct: 17 SFYTTEEQIHELFSKCGEVKRLVMGLDRFNKTPCGFCFVE 56
>gi|157872191|ref|XP_001684644.1| putative nuclear cap binding protein [Leishmania major strain
Friedlin]
gi|68127714|emb|CAJ05923.1| putative nuclear cap binding protein [Leishmania major strain
Friedlin]
Length = 188
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 14/91 (15%)
Query: 1 MTTVISPSVELSSYRDQH-----------FKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQ 49
M++ + +V Y D+H F+ R EQ L ++T+YVGNLS+YTTEEQ
Sbjct: 1 MSSDLVDTVPRMEYVDRHELLRSLLTAEEFRERRQEQ---LNYSTTVYVGNLSFYTTEEQ 57
Query: 50 LYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ FS CG I+ I+MGL++ + PCGFCF+
Sbjct: 58 VCNHFSPCGHIRDIVMGLNEATRCPCGFCFV 88
>gi|195659473|gb|ACG49204.1| nuclear cap-binding protein subunit 2 [Zea mays]
gi|413923013|gb|AFW62945.1| nuclear cap-binding protein subunit 2 [Zea mays]
Length = 202
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 36/40 (90%)
Query: 41 LSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+S+YTTEEQ YELFS+ G+IK+IIMGLDK KTPCGFCF+
Sbjct: 1 MSFYTTEEQAYELFSRAGEIKKIIMGLDKNSKTPCGFCFV 40
>gi|402469520|gb|EJW04342.1| hypothetical protein EDEG_01398 [Edhazardia aedis USNM 41457]
Length = 159
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 7 PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMG 66
P E Y D+ F+G+ E ++LL ++TLYVG + EE ++ELFS G +KR+IMG
Sbjct: 12 PKREPYQYIDKKFQGTDEEFKELLNKSTTLYVGEVCPAIKEECIWELFSLVGPVKRVIMG 71
Query: 67 LDKYKKTPCGFCFLE 81
+++ + PCGFCF+E
Sbjct: 72 INRNDRRPCGFCFVE 86
>gi|237838167|ref|XP_002368381.1| nuclear cap-binding protein, putative [Toxoplasma gondii ME49]
gi|211966045|gb|EEB01241.1| nuclear cap-binding protein, putative [Toxoplasma gondii ME49]
gi|221484348|gb|EEE22644.1| 20 kD nuclear cap binding protein, putative [Toxoplasma gondii
GT1]
gi|221505675|gb|EEE31320.1| 20 kD nuclear cap binding protein, putative [Toxoplasma gondii
VEG]
Length = 282
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 50/69 (72%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
+Y D+ S+ + ++ + + +YVGNL++ TTE++LYE+FS+ G I+R++MGL++ +
Sbjct: 13 TYYDRRTARSKEDWQEKVSRSCVVYVGNLNFSTTEDELYEVFSQAGLIRRVVMGLNRQTR 72
Query: 73 TPCGFCFLE 81
PCGF F+E
Sbjct: 73 APCGFAFVE 81
>gi|70946005|ref|XP_742761.1| nuclear cap-binding protein [Plasmodium chabaudi chabaudi]
gi|56521923|emb|CAH80634.1| nuclear cap-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 241
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 42/51 (82%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++ + T+Y+GNLS YTTE+Q+YE SK G+++ IIMGL + +K+PCGFCF+
Sbjct: 30 IQYSKTVYIGNLSIYTTEQQIYEHMSKAGEVENIIMGLHRTEKSPCGFCFV 80
>gi|300122266|emb|CBK22839.2| unnamed protein product [Blastocystis hominis]
Length = 188
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YRD + S+ +Q L+++ST+YVGNL++ TTEE+++ FS CG I ++IMG+++
Sbjct: 16 YRD--YFSSKEDQLNALKSSSTIYVGNLNFSTTEERIFAAFSCCGPIDKVIMGINRRTLA 73
Query: 74 PCGFCFL 80
PCGFCF+
Sbjct: 74 PCGFCFV 80
>gi|123455280|ref|XP_001315386.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121898061|gb|EAY03163.1| hypothetical protein TVAG_345370 [Trichomonas vaginalis G3]
Length = 155
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 1 MTTVISPS----VELSSYRDQHFKGSRAEQEKLLRT-TSTLYVGNLSYYTTEEQLYELFS 55
M ++I+ S V S Y D H G Q K+L + +ST+YVGNL++ TTE +Y +FS
Sbjct: 1 MASLIALSEFGKVRHSEYVD-HKSGIDDMQLKILMSRSSTIYVGNLNFSTTEAAIYSVFS 59
Query: 56 KCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ G IKRII G++K TPCGFCF+E
Sbjct: 60 QFGPIKRIIRGVNKLTLTPCGFCFVE 85
>gi|401401970|ref|XP_003881139.1| putative nuclear cap-binding protein [Neospora caninum Liverpool]
gi|325115551|emb|CBZ51106.1| putative nuclear cap-binding protein [Neospora caninum Liverpool]
Length = 287
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 48/69 (69%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
+Y D+ S E + + + +YVGNL++ TTE++LYE+FS G ++R++MGL++ +
Sbjct: 13 TYYDRRSANSLEEWKAKVARSCVVYVGNLNFSTTEDELYEVFSHAGLVRRVVMGLNRQTR 72
Query: 73 TPCGFCFLE 81
+PCGF F+E
Sbjct: 73 SPCGFAFVE 81
>gi|68075801|ref|XP_679820.1| nuclear cap-binding protein [Plasmodium berghei strain ANKA]
gi|56500646|emb|CAH95740.1| nuclear cap-binding protein, putative [Plasmodium berghei]
Length = 222
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 42/51 (82%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++ + T+Y+G+LS YTTE+Q+YE +K GD++ IIMGL + +K+PCGFCF+
Sbjct: 30 IQYSKTVYIGDLSIYTTEQQIYEHMNKAGDVENIIMGLHRTEKSPCGFCFV 80
>gi|440492742|gb|ELQ75283.1| Nuclear cap-binding protein complex, subunit CBP20 (RRM
superfamily) [Trachipleistophora hominis]
Length = 193
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 7 PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMG 66
P +YRD+ F G+ + EKLL TT TLY+GNL TTEE+L+ +F+ I+RIIMG
Sbjct: 6 PQPSKKAYRDRTFSGTDEQYEKLLSTTCTLYIGNLPLSTTEERLWTVFADL-PIRRIIMG 64
Query: 67 LDKYKKTPCGFCFLE 81
L++ CGF F+E
Sbjct: 65 LNRNNLLFCGFAFVE 79
>gi|413923012|gb|AFW62944.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 52
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 36/40 (90%)
Query: 41 LSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+S+YTTEEQ YELFS+ G+IK+IIMGLDK KTPCGFCF+
Sbjct: 1 MSFYTTEEQAYELFSRAGEIKKIIMGLDKNSKTPCGFCFV 40
>gi|219120813|ref|XP_002185638.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582487|gb|ACI65108.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 127
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 18 HFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGF 77
H+K S A+Q + L +STLY+GNL++ T + F++ G ++ + MGLD+ KKTPCGF
Sbjct: 6 HYK-SPAQQMEALAKSSTLYIGNLAFSTRSRHVRAHFAQIGPVRSVQMGLDRLKKTPCGF 64
Query: 78 CFLE 81
CF+E
Sbjct: 65 CFVE 68
>gi|429963902|gb|ELA45900.1| hypothetical protein VCUG_02606 [Vavraia culicis 'floridensis']
Length = 193
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 7 PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMG 66
P +YRD+ F G+ + EKLL TT TLY+GNL TTEE+L+ +F ++R+IMG
Sbjct: 6 PQPPKKAYRDRTFTGTDEQYEKLLSTTCTLYIGNLPLSTTEERLWTVFGDV-PVRRVIMG 64
Query: 67 LDKYKKTPCGFCFLE 81
+++ + CGF F+E
Sbjct: 65 VNRNNRLFCGFAFVE 79
>gi|24954104|gb|AAN64583.1| RNA-binding protein [Babesia bovis]
Length = 172
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S E ++ +ST+YVGNLS+ T EE+++E+FS+ G I RI++GL+ +K
Sbjct: 14 YWDKKLCSSPEEWNYRIQRSSTVYVGNLSFATPEERIHEIFSQAGRIHRIVLGLNSIEKK 73
Query: 74 PCGFCFL 80
PCGF F+
Sbjct: 74 PCGFAFV 80
>gi|156086648|ref|XP_001610733.1| nuclear cap-binding protein [Babesia bovis T2Bo]
gi|154797986|gb|EDO07165.1| nuclear cap-binding protein, putative [Babesia bovis]
Length = 172
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S E ++ +ST+YVGNLS+ T EE+++E+FS+ G I RI++GL+ +K
Sbjct: 14 YWDKKLCSSPEEWNYRIQRSSTVYVGNLSFATPEERIHEIFSQAGRIHRIVLGLNSIEKK 73
Query: 74 PCGFCFL 80
PCGF F+
Sbjct: 74 PCGFAFV 80
>gi|156098007|ref|XP_001615036.1| nuclear cap-binding protein [Plasmodium vivax Sal-1]
gi|148803910|gb|EDL45309.1| nuclear cap-binding protein, putative [Plasmodium vivax]
Length = 236
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ T+Y+GNLS YTTE+Q+YE + G+++ IIMGL + +K+PCGFCF+
Sbjct: 33 SKTVYIGNLSIYTTEQQIYEHMRQAGNVENIIMGLHRTEKSPCGFCFV 80
>gi|389582530|dbj|GAB65268.1| nuclear cap-binding protein [Plasmodium cynomolgi strain B]
Length = 238
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ T+Y+GNLS YTTE+Q+YE + G+++ IIMGL + +K+PCGFCF+
Sbjct: 33 SKTVYIGNLSIYTTEQQIYEHMRQAGNVENIIMGLHRTEKSPCGFCFV 80
>gi|221053662|ref|XP_002258205.1| nuclear cap-binding protein [Plasmodium knowlesi strain H]
gi|193808038|emb|CAQ38742.1| nuclear cap-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 236
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 41/51 (80%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++ + T+Y+GNLS YTTE+Q+YE + G+++ IIMGL + +K+PCGFCF+
Sbjct: 30 IQFSKTVYIGNLSIYTTEQQIYEHMRQAGNVENIIMGLHRTEKSPCGFCFV 80
>gi|254565377|ref|XP_002489799.1| Small subunit of the heterodimeric cap binding complex that also
contains Sto1p [Komagataella pastoris GS115]
gi|238029595|emb|CAY67518.1| Small subunit of the heterodimeric cap binding complex that also
contains Sto1p [Komagataella pastoris GS115]
gi|328350216|emb|CCA36616.1| Nuclear cap-binding protein subunit 2 [Komagataella pastoris CBS
7435]
Length = 281
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++T+YVG + Y TEEQ++ELFS+CG I+ IIMGL+ ++P GFCF+
Sbjct: 47 SATVYVGRIGVYVTEEQIHELFSRCGKIREIIMGLNAKTQSPAGFCFV 94
>gi|84998178|ref|XP_953810.1| RNA binding protein [Theileria annulata]
gi|65304807|emb|CAI73132.1| RNA binding protein, putative [Theileria annulata]
Length = 177
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S E ++ + +ST+YVGNL++ T EE+++E+ G+I RI++GL+ KK+
Sbjct: 14 YWDKKSCSSIEEWKEKIANSSTVYVGNLAFSTPEERIHEVLQAAGEIDRIVLGLNSIKKS 73
Query: 74 PCGFCFL 80
PCGF F+
Sbjct: 74 PCGFAFV 80
>gi|71033685|ref|XP_766484.1| nuclear cap-binding protein [Theileria parva strain Muguga]
gi|68353441|gb|EAN34201.1| nuclear cap-binding protein, putative [Theileria parva]
Length = 219
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S E ++ + +ST+YVGNL++ T EE+++E+ G+I RI++GL+ KK+
Sbjct: 56 YWDKKSCSSIEEWKEKIANSSTVYVGNLAFSTPEERIHEVLQAAGEIDRIVLGLNSIKKS 115
Query: 74 PCGFCFL 80
PCGF F+
Sbjct: 116 PCGFAFV 122
>gi|209878472|ref|XP_002140677.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
gi|209556283|gb|EEA06328.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
Length = 209
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
SY D+ A EK+ ++T T+YVGNLS++T E +YELF+ CG +K++IMGL+
Sbjct: 13 SYFDKKNYSKEAWLEKISKST-TVYVGNLSFFTPEHIIYELFNSCGPVKQVIMGLNSQTL 71
Query: 73 TPCGFCFLE 81
CGFCF++
Sbjct: 72 QFCGFCFVQ 80
>gi|401825699|ref|XP_003886944.1| RNA-binding protein [Encephalitozoon hellem ATCC 50504]
gi|392998101|gb|AFM97963.1| RNA-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 157
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YR++ F G+ E + + +ST++V N+ EE+++ELF CGD+KR+IMGL++
Sbjct: 17 YREKTFVGTDEEYIEAKKNSSTIFVSNIPTSVREERIWELFLLCGDVKRVIMGLNRNTLR 76
Query: 74 PCGFCFLE 81
CGFCF+E
Sbjct: 77 FCGFCFVE 84
>gi|58261140|ref|XP_567980.1| 20 kda nuclear cap binding protein (ncbp) [Cryptococcus
neoformans var. neoformans JEC21]
gi|57230062|gb|AAW46463.1| 20 kda nuclear cap binding protein (ncbp), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 195
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
R + +LL +STLY+GNLS+YTTE Q+Y+ + IIMGLD+ KTPCGF F+E
Sbjct: 5 DRETERRLLALSSTLYIGNLSFYTTETQMYQ--------RGIIMGLDRNTKTPCGFAFVE 56
>gi|429962100|gb|ELA41644.1| hypothetical protein VICG_01277 [Vittaforma corneae ATCC 50505]
Length = 140
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y ++ FKG++ E K L + T+YV N+ EE+L+ LFS G++KR+IMG+++ T
Sbjct: 16 YIEKSFKGTQEEYLKALEDSKTIYVSNIDENIKEERLWMLFSMVGEVKRVIMGINRGLLT 75
Query: 74 PCGFCFLE 81
CGFCF+E
Sbjct: 76 FCGFCFVE 83
>gi|443925825|gb|ELU44587.1| RNA recognition motif domain-containing protein [Rhizoctonia
solani AG-1 IA]
Length = 224
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 25/101 (24%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYV--------------------GN 40
M V++P + S+YRD + + ++LL +STLYV GN
Sbjct: 1 MAQVVNPLDQASTYRDSQSRLDAQKTQELLDRSSTLYVCFVVRPVKYIAELLDTLKQVGN 60
Query: 41 LSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LS+YTTEEQ+Y+LF KC + G+ KTPCGFCF+E
Sbjct: 61 LSFYTTEEQIYDLFQKCASPE-DGGGV----KTPCGFCFVE 96
>gi|300707377|ref|XP_002995899.1| hypothetical protein NCER_101089 [Nosema ceranae BRL01]
gi|239605135|gb|EEQ82228.1| hypothetical protein NCER_101089 [Nosema ceranae BRL01]
Length = 144
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 7 PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMG 66
P+V S YR++ F G+ E +L+ ++T+Y+ N+ + E +++EL G++KR+IMG
Sbjct: 10 PTVPTSFYREKTFTGTDEEYLELINNSTTVYINNIDHSVDETRIWELAMLFGEVKRVIMG 69
Query: 67 LDKYKKTPCGFCFLE 81
+++ T CGFCF+E
Sbjct: 70 INRNFLTFCGFCFVE 84
>gi|19173034|ref|NP_597585.1| similarity to 20kDa NUCLEAR CAP BINDING PROTEIN [Encephalitozoon
cuniculi GB-M1]
gi|19168701|emb|CAD26220.1| similarity to 20kDa NUCLEAR CAP BINDING PROTEIN [Encephalitozoon
cuniculi GB-M1]
gi|449329712|gb|AGE95982.1| 20kDa nuclear cap binding protein [Encephalitozoon cuniculi]
Length = 157
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YR++ F G+ E + R++ST++V N+S EE+++ELF CG ++R++MGL++
Sbjct: 17 YREKTFVGTDEEYLEAKRSSSTVFVSNISTSVREERIWELFLLCGPVRRVVMGLNRNTLR 76
Query: 74 PCGFCFLE 81
CGFCF+E
Sbjct: 77 FCGFCFVE 84
>gi|428673197|gb|EKX74110.1| nuclear cap binding protein family member protein [Babesia equi]
Length = 170
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 42/56 (75%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E + + +ST+YVGNL++ T EE+++E+ G+I+RI++GL+ +K+PCGF F+
Sbjct: 25 EWNEKIAKSSTVYVGNLAFTTPEERIHEVLQAAGEIERIVLGLNSIQKSPCGFAFV 80
>gi|361130115|gb|EHL01969.1| putative Nuclear cap-binding protein subunit 2 [Glarea lozoyensis
74030]
Length = 104
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 33/34 (97%)
Query: 42 SYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPC 75
S+YTTEEQ++ELF+KCG+IKR+IMGLD++ KTPC
Sbjct: 6 SFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPC 39
>gi|145532481|ref|XP_001451996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419673|emb|CAK84599.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCG-DIKRIIMGLDK 69
+S Y D+ +R E L ++TLY+GNLS YTTEEQ++ELF++ G ++R+IMG +K
Sbjct: 17 ISQYYDKSSNLTREEYFYKLSISTTLYLGNLSIYTTEEQIFELFNRVGAGVRRLIMGRNK 76
Query: 70 YKKTPCGFCFLE 81
GFCF+E
Sbjct: 77 ETGKAIGFCFIE 88
>gi|145531505|ref|XP_001451519.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419174|emb|CAK84122.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCG-DIKRIIMGLDK 69
+S Y D+ +R E L ++TLY+GNLS YTTEEQ++ELF++ G ++R+IMG +K
Sbjct: 17 ISQYYDKSSNLTREEYFYKLSISTTLYLGNLSIYTTEEQIFELFNRVGAGVRRLIMGRNK 76
Query: 70 YKKTPCGFCFLE 81
GFCF+E
Sbjct: 77 ETGKAIGFCFIE 88
>gi|403221324|dbj|BAM39457.1| uncharacterized protein TOT_010000912 [Theileria orientalis
strain Shintoku]
Length = 176
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ ++ E + +ST+YVGNL++ T EE+++E+ G+I RI++GL+ +K+
Sbjct: 14 YWDKKSCSTKNEWLDKIAHSSTVYVGNLAFSTPEERIHEVLQAAGEIDRIVLGLNSIQKS 73
Query: 74 PCGFCFL 80
PCGF F+
Sbjct: 74 PCGFAFV 80
>gi|118401473|ref|XP_001033057.1| nuclear cap binding protein [Tetrahymena thermophila]
gi|89287403|gb|EAR85394.1| nuclear cap binding protein [Tetrahymena thermophila SB210]
Length = 236
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 1 MTTVISPSVELSS-YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGD 59
M + + S++ S Y D+ + S + +K L TT+T+YVGNL + T E LYELFS+ G
Sbjct: 1 MASFLYDSLQPQSLYYDKKSELSEQDYKKRLETTTTVYVGNLHFQTRESALYELFSRAGQ 60
Query: 60 IKRIIMGLDKYKKTPCGFCFL 80
IK +IMG++K + GFCF+
Sbjct: 61 IKDLIMGINK-EGQSAGFCFV 80
>gi|396081066|gb|AFN82685.1| putative RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 157
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YR++ F G+ E + + +ST+++ N+ EE+++ELF CG++KR+IMGL++
Sbjct: 17 YREKTFVGTDEEYVEAKKNSSTVFISNIPISVREERIWELFLLCGEVKRVIMGLNRNTLR 76
Query: 74 PCGFCFLE 81
CGFCF+E
Sbjct: 77 FCGFCFVE 84
>gi|85080737|ref|XP_956595.1| nuclear cap binding protein subunit 2 [Neurospora crassa OR74A]
gi|28917665|gb|EAA27359.1| nuclear cap binding protein subunit 2 [Neurospora crassa OR74A]
gi|350290593|gb|EGZ71807.1| nuclear cap binding protein subunit 2 [Neurospora tetrasperma
FGSC 2509]
Length = 145
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 32/33 (96%)
Query: 49 QLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YELFSKCG+IKR++MGLD+ +KTPCGFCF+E
Sbjct: 23 KVYELFSKCGEIKRLVMGLDRLQKTPCGFCFVE 55
>gi|66475440|ref|XP_627536.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
gi|32398753|emb|CAD98713.1| nuclear cap-binding protein, possible [Cryptosporidium parvum]
gi|46228990|gb|EAK89839.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
Length = 213
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ ++T+YVGNLS++TTEE + E+F CG IK I +GL+ PCGFCF++
Sbjct: 29 ISKSTTVYVGNLSFFTTEEIISEVFGLCGPIKAIYLGLNHQTMQPCGFCFVQ 80
>gi|67601215|ref|XP_666381.1| nuclear cap-binding protein [Cryptosporidium hominis TU502]
gi|54657364|gb|EAL36149.1| nuclear cap-binding protein [Cryptosporidium hominis]
Length = 213
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ ++T+YVGNLS++TTEE + E+F CG IK I +GL+ PCGFCF++
Sbjct: 29 ISKSTTVYVGNLSFFTTEEIIGEVFGLCGPIKAIYLGLNHQTMQPCGFCFVQ 80
>gi|303388671|ref|XP_003072569.1| putative RNA-binding protein [Encephalitozoon intestinalis ATCC
50506]
gi|303301710|gb|ADM11209.1| putative RNA-binding protein [Encephalitozoon intestinalis ATCC
50506]
Length = 157
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
YR++ F G+ E + + +ST++V N+ EE+++ELF CG +KR+IMGL++
Sbjct: 17 YREKTFVGTDEEYLEAKKNSSTIFVSNVPTNVREERIWELFLLCGAVKRVIMGLNRNTLR 76
Query: 74 PCGFCFLE 81
CGFCF+E
Sbjct: 77 FCGFCFVE 84
>gi|259479666|tpe|CBF70098.1| TPA: small subunit of nuclear cap-binding protein complex
(AFU_orthologue; AFUA_2G08570) [Aspergillus nidulans
FGSC A4]
Length = 185
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 12/83 (14%)
Query: 11 LSSYRDQHFKGSRAEQEK----LLRTTSTLYVGNLSYYTTEEQLYELFS--------KCG 58
LS + + + +E++K LR +TLYVGNLS ++ + + + +CG
Sbjct: 21 LSKNKRRKYSSDESEEQKDPMEGLRDATTLYVGNLSTSSSPSSVSQPHNPDLLLTRFRCG 80
Query: 59 DIKRIIMGLDKYKKTPCGFCFLE 81
+IKR++MGLD+Y KTPCGFCF+E
Sbjct: 81 EIKRLVMGLDRYNKTPCGFCFVE 103
>gi|407035052|gb|EKE37504.1| RNA recognition motif domain containing protein [Entamoeba
nuttalli P19]
Length = 184
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ T++TLYVGN+S+ ++++Y LF + G+I R+IMG++ + PCGFCF+E
Sbjct: 29 ISTSTTLYVGNVSHSMNDKRVYTLFGRFGNINRVIMGVN-HSNEPCGFCFVE 79
>gi|67474332|ref|XP_652915.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56469819|gb|EAL47528.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449704767|gb|EMD44946.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 184
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ T++TLYVGN+S+ ++++Y LF + G+I R+IMG++ + PCGFCF+E
Sbjct: 29 ISTSTTLYVGNVSHSMNDKRVYTLFGRFGNINRVIMGVN-HSNEPCGFCFVE 79
>gi|167377977|ref|XP_001734617.1| nuclear cap-binding protein subunit [Entamoeba dispar SAW760]
gi|165903822|gb|EDR29251.1| nuclear cap-binding protein subunit, putative [Entamoeba dispar
SAW760]
Length = 184
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ T++TLYVGN+S+ ++++Y LF + G+I R+IMG++ + PCGFCF+E
Sbjct: 29 ISTSTTLYVGNVSHSMNDKRVYTLFGRFGNINRVIMGVN-HSNEPCGFCFVE 79
>gi|67539944|ref|XP_663746.1| hypothetical protein AN6142.2 [Aspergillus nidulans FGSC A4]
gi|40738738|gb|EAA57928.1| hypothetical protein AN6142.2 [Aspergillus nidulans FGSC A4]
Length = 145
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFS--------KCGDIKRIIMGLDKYKKTPCGFCFLE 81
LR +TLYVGNLS ++ + + + +CG+IKR++MGLD+Y KTPCGFCF+E
Sbjct: 4 LRDATTLYVGNLSTSSSPSSVSQPHNPDLLLTRFRCGEIKRLVMGLDRYNKTPCGFCFVE 63
>gi|224001402|ref|XP_002290373.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973795|gb|EED92125.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 125
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S Q + L +ST+YVGNL++ T L F + G + + +GLD++KKT
Sbjct: 8 YWDRSHYDSPESQIRALAHSSTVYVGNLAFSTRTIHLRRHFEQLGPVADVQVGLDRFKKT 67
Query: 74 PCGFCFLE 81
PCGF F+E
Sbjct: 68 PCGFAFVE 75
>gi|256086199|ref|XP_002579291.1| nuclear cap binding protein [Schistosoma mansoni]
Length = 149
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 4 VISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRI 63
++ S S YRD+ S E + LR T+TLY+GNLS+YT EE
Sbjct: 10 ILDASFYKSPYRDRRNDFSPRELSQCLRETTTLYIGNLSFYTREEXXXXX---------X 60
Query: 64 IMGLDKYKKTPCGFCFLE 81
+GL ++ KTPCGFCF+E
Sbjct: 61 XLGLHRFDKTPCGFCFVE 78
>gi|195635371|gb|ACG37154.1| hypothetical protein [Zea mays]
Length = 58
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 1 MTTVISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKC 57
M ++ +LS+YRD+ FKG++ E E L ++TLY+GN+S+YTTEEQ L +KC
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEATLHASTTLYIGNMSFYTTEEQAL-LDAKC 56
>gi|399217437|emb|CCF74324.1| unnamed protein product [Babesia microti strain RI]
Length = 166
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 14 YRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKT 73
Y D+ S AE L T T+YVGNL++ T EE+++++F G I + MGL+ +
Sbjct: 14 YWDKKSCSSPAEWFDKLDRTCTVYVGNLTFTTPEERIHQVFRMVGQIDHVTMGLNSVTLS 73
Query: 74 PCGFCFL 80
PCGF F+
Sbjct: 74 PCGFAFV 80
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 16 DQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPC 75
D+ S E+E+ + ++YVGN+ Y T E+L +LF CG I R+ + DK+ + P
Sbjct: 62 DETGDASMTEEEREAIDSRSIYVGNVDYGATPEELQQLFKDCGTINRVTILCDKFTRHPK 121
Query: 76 GFCFLE 81
GF ++E
Sbjct: 122 GFAYVE 127
>gi|115443016|ref|XP_001218315.1| nuclear cap binding protein subunit 2 [Aspergillus terreus
NIH2624]
gi|114188184|gb|EAU29884.1| nuclear cap binding protein subunit 2 [Aspergillus terreus
NIH2624]
Length = 115
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 27/28 (96%)
Query: 54 FSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
FS+CG+IKR++MGLD++ KTPCGFCF+E
Sbjct: 6 FSRCGEIKRLVMGLDRFTKTPCGFCFVE 33
>gi|167517171|ref|XP_001742926.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778025|gb|EDQ91640.1| predicted protein [Monosiga brevicollis MX1]
Length = 95
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y TEE++ LF CG +KRI + DK+ P GFC++E
Sbjct: 12 SIYVGNVEYAATEEEIQALFKDCGVVKRIKIMRDKFTGHPKGFCYVE 58
>gi|269860401|ref|XP_002649922.1| RNA-binding protein, predicted [Enterocytozoon bieneusi H348]
gi|220066682|gb|EED44156.1| RNA-binding protein, predicted [Enterocytozoon bieneusi H348]
Length = 135
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 12 SSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
++Y D+ F G++ E LL + T+Y+ N+ + EE+L+ LF DI+ +IMG+D
Sbjct: 9 TTYIDKKFPGTKEEYCNLLGKSKTIYITNIPLHVREERLWNLFGIINDIEHLIMGVDNEL 68
Query: 72 KTPCGFCFL 80
K GFCF+
Sbjct: 69 KF-AGFCFI 76
>gi|162606412|ref|XP_001713236.1| nuclear cap binding protein subunit 2 [Guillardia theta]
gi|12580702|emb|CAC27020.1| nuclear cap binding protein subunit 2 [Guillardia theta]
Length = 97
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++ + T+YVG+LS E L+ FS+ G IKR+I+G++ PCGFCF+E
Sbjct: 1 MKLSKTIYVGSLSKKLKENFLWYFFSRLGKIKRLIIGINNKTLLPCGFCFVE 52
>gi|325972386|ref|YP_004248577.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027624|gb|ADY14383.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 95
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDI--KRIIMGLDKYKKTPCGFCFLE 81
+YVGN+SY TTEE LY LF++ GD+ RIIM D+ P GF F+E
Sbjct: 5 IYVGNMSYQTTEEALYSLFAQYGDVMSARIIM--DRDTNRPKGFAFVE 50
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y + E+L E F CG I+RI + +DKY P GF ++E
Sbjct: 117 SIYVGNVDYGSAPEELQEHFKSCGSIQRITIMVDKYSGHPKGFAYIE 163
>gi|427712046|ref|YP_007060670.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
gi|427376175|gb|AFY60127.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
Length = 81
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
TLYVGNLSY TEE L E+F+K G +KR+++ +D+ GF F+
Sbjct: 2 TLYVGNLSYDATEENLREIFAKHGTVKRVVLPVDRETGKRRGFAFV 47
>gi|22298986|ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
Length = 90
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TLY+GNLSY TE L E+F K G I+RI++ +D+ GF F+E
Sbjct: 2 TLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFVE 48
>gi|340509145|gb|EGR34706.1| nuclear cap-binding protein, putative [Ichthyophthirius
multifiliis]
Length = 269
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 12 SSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYK 71
S Y D+ S E + L T+T+YVGNL ++E LYELF + G +K IIMG+ +
Sbjct: 13 SQYYDKRSNLSEKEYAEKLLNTTTVYVGNLHCNSSENSLYELFQRAGQVKDIIMGVTENG 72
Query: 72 KTPCGFCFL 80
+ GFCF+
Sbjct: 73 EF-AGFCFV 80
>gi|321474302|gb|EFX85267.1| hypothetical protein DAPPUDRAFT_98779 [Daphnia pulex]
Length = 283
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TL++GNLSY TT+E + F+KCG IK + + L+K P GF ++E
Sbjct: 161 TLFIGNLSYDTTKEDILRHFAKCGPIKNVRIPLEKETNQPRGFGYIE 207
>gi|440292957|gb|ELP86129.1| nuclear cap-binding protein subunit, putative [Entamoeba invadens
IP1]
Length = 191
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++TLYVGNL T+++L LF + GD+ RIIMG++ ++ CGFCF+E
Sbjct: 31 STTLYVGNLGPSVTDKELNYLFGEYGDLTRIIMGVN-HRNEYCGFCFVE 78
>gi|448113963|ref|XP_004202460.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359383328|emb|CCE79244.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 211
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
EL+S + + +E++K + + S +YVGN+ Y T +L + FS CG + R+ + L+K
Sbjct: 66 ELNSKLNTEVDNATSEEKKDIDSRS-IYVGNVDYGATPLELQQHFSGCGVVNRVTIPLNK 124
Query: 70 YKKTPCGFCFLE 81
+ +P GF +LE
Sbjct: 125 FSGSPKGFAYLE 136
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EKL + ++YVGN+ Y T E+L + F+ CG I R+ + DKY P GF ++E
Sbjct: 129 EEKLESDSRSVYVGNVDYQATAEELGQHFNGCGSINRVTILCDKYSGHPKGFAYVE 184
>gi|213409842|ref|XP_002175691.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003738|gb|EEB09398.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 174
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ D+ + R ++E L ++YVGN+ Y T E+L F++CG I R+ + DK
Sbjct: 36 EMQEQLDKESEALRNDKEAL--DAQSVYVGNVDYSVTPEELQAHFAECGPINRVTILCDK 93
Query: 70 YKKTPCGFCFLE 81
+ P GF ++E
Sbjct: 94 FTGHPKGFAYIE 105
>gi|448522951|ref|XP_003868821.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis Co
90-125]
gi|380353161|emb|CCG25917.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis]
Length = 178
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 10 ELSSYRDQHFKGSRAE----QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
E S R Q RAE QE++ + ++YVGN+ Y +T EQL E F G I+R+ +
Sbjct: 8 ERRSSRPQETDEERAERLAKQEEV--DSRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTI 65
Query: 66 GLDKYKKTPCGFCFLE 81
DKY P G+ ++E
Sbjct: 66 LFDKYSGLPKGYAYVE 81
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E+EK+ ++YVGN+ Y T E++ + F CG I R+ + DK+ P GF ++E
Sbjct: 83 SEEEKMEVDGRSIYVGNVDYGATPEEIQQHFQSCGTINRVTILCDKFTGHPKGFAYVE 140
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ +G + ++E + +++VGN+ Y + E+L F CG I R+ + LDK
Sbjct: 50 EMQASMDQERQGLQDDKEDI--DNRSVFVGNVDYSASPEELQSHFGDCGSINRVTILLDK 107
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 108 FTGQPKGYAYVE 119
>gi|428205820|ref|YP_007090173.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428007741|gb|AFY86304.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 104
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TEE L +F++ G IKRI++ +D+ GF F++
Sbjct: 2 TIYVGNLSYRATEEDLRTVFAEYGAIKRIVLPMDRETGRMRGFAFVD 48
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ + ++YVGN+ Y +T E+L F CG + R+ + DKY P GF ++E
Sbjct: 83 EEKIEADSRSIYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKYTGHPKGFAYIE 138
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DKY P GF ++E
Sbjct: 90 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIE 145
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY EE L E+F++ G +KR+ + DK P GF F+E
Sbjct: 2 SIYVGNLSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVE 48
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DKY P GF ++E
Sbjct: 90 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIE 145
>gi|448520521|ref|XP_003868297.1| hypothetical protein CORT_0C00140 [Candida orthopsilosis Co 90-125]
gi|380352637|emb|CCG25393.1| hypothetical protein CORT_0C00140 [Candida orthopsilosis]
Length = 327
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 19 FKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFC 78
F+G R E+E L + L+VGNLS+ TTE+ L E F CGDI RI M + GF
Sbjct: 162 FEG-RPEKESKLPPSRILFVGNLSFDTTEDNLREHFQHCGDIVRIRMATFQDTGKCKGFA 220
Query: 79 FLE 81
F++
Sbjct: 221 FID 223
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DKY P GF ++E
Sbjct: 53 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIE 108
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+S L+VGNLS+ TE+QL+E+FS G +K + M D+ P GF ++E
Sbjct: 408 SSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVE 456
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 23 RAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
R +EK+ ++YVGN+ Y T EQL F+ CG I R+ + DK+ P G+ ++E
Sbjct: 130 RMTEEKVEADQRSIYVGNVDYGGTAEQLESHFNNCGKINRVTILCDKFSGHPKGYAYIE 188
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+EK + ++YVGN+ Y T E++ + F CG I R+ + DK+ P G+ ++E
Sbjct: 68 EEEKAATDSRSIYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVE 124
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L E+F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVE 48
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L + F CG I R+ + DK+ P GF ++E
Sbjct: 113 EEKIEVDARSIYVGNVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIE 168
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EQEK ++YVGN+ Y T E+L + F CG + R+ + DK+ P GF ++E
Sbjct: 58 SEQEKKEIDQRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIE 115
>gi|443322691|ref|ZP_21051708.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442787558|gb|ELR97274.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 96
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY +E+L E+F++ G +KR+ + L++ P GF F+E
Sbjct: 2 SIYVGNLSYDVKQEELAEVFAEYGTVKRVHIPLERETSRPRGFAFVE 48
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DKY P GF ++E
Sbjct: 90 EEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIE 145
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GN+ Y TT E+L E FSK G I R+ + D++ P G+ ++E
Sbjct: 73 SVYIGNVDYNTTPEELEEFFSKIGTINRVTILFDRFTGRPKGYAYVE 119
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L + F CG I R+ + DK+ P GF ++E
Sbjct: 113 EEKIEVDARSIYVGNVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIE 168
>gi|220905698|ref|YP_002481009.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219862309|gb|ACL42648.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 90
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TE L E+F++ G IKRI + +D+ GF F+E
Sbjct: 2 TIYIGNLSYQATENDLREVFAEYGTIKRITLPIDRETGRMRGFAFVE 48
>gi|355672297|gb|AER95015.1| BCL2-like 2 [Mustela putorius furo]
Length = 216
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 149 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 204
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L + F CG I R+ + +KY P GF ++E
Sbjct: 89 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIE 144
>gi|374314656|ref|YP_005061084.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359350300|gb|AEV28074.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 92
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGN+SY TTE+ L ELFS+ G++ + +D+ + P GF F+E
Sbjct: 5 IYVGNMSYNTTEDDLRELFSQYGNVLSATIIMDRETRRPKGFGFVE 50
>gi|210076154|ref|XP_504024.2| YALI0E16500p [Yarrowia lipolytica]
gi|199426927|emb|CAG79617.2| YALI0E16500p [Yarrowia lipolytica CLIB122]
Length = 184
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T ++L + F KCG ++R+ + +DK+ P G+ ++E
Sbjct: 69 SIYVGNVDYGATPQELEKHFEKCGSVQRVTILMDKFTGNPKGYAYIE 115
>gi|345307423|ref|XP_001512125.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 412
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 4 VISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRI 63
V++ S LS+ F G+ +EK+ ++YVGN+ Y T E+L F+ CG+I R+
Sbjct: 128 VVTDSFFLSTDAGALFPGT--PKEKMEADNRSVYVGNVDYGGTAEELESHFNSCGEINRV 185
Query: 64 IMGLDKYKKTPCGFCFLE 81
+ DK+ P G+ ++E
Sbjct: 186 TILCDKFSGHPKGYAYIE 203
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVG++ Y E+L E F CG I+RI + +DKY P GF ++E
Sbjct: 102 SVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIE 148
>gi|168700972|ref|ZP_02733249.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 117
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LYVGN+S+ TTE++L ELFS+ G + + + +D+ P GF F+E
Sbjct: 2 NLYVGNMSFSTTEDELRELFSQYGTVTKAQIVMDRETGRPRGFAFVE 48
>gi|149240135|ref|XP_001525943.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450066|gb|EDK44322.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y +T EQ+ ELF K G ++R+ + DK+ P G+ ++E
Sbjct: 67 SVYVGNVDYQSTPEQIEELFHKVGIVERVTILFDKFSGLPKGYAYVE 113
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L + F CG I R+ + +KY P GF ++E
Sbjct: 90 EEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIE 145
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L + F CG I R+ + +KY P GF ++E
Sbjct: 90 EEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIE 145
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
K + A +K +S L+VGNLS+ TE+ L+E F++ GDIK + + D+ P GF +
Sbjct: 130 KRAEAYGDKASEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAY 189
Query: 80 LE 81
+E
Sbjct: 190 VE 191
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQATLDQQSENLREDKEEI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FSGQPKGYAYVE 114
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TE+ L +FS+ G I R+ + +D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVE 48
>gi|448101244|ref|XP_004199515.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359380937|emb|CCE81396.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 213
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
EL+S + + +E++K + + S +Y+GN+ Y T +L + FS CG + R+ + L+K
Sbjct: 66 ELNSKLNTEVDNATSEEKKDIDSRS-IYIGNVDYGATPLELQQHFSGCGVVNRVTIPLNK 124
Query: 70 YKKTPCGFCFLE 81
+ +P G+ +LE
Sbjct: 125 FSGSPKGYAYLE 136
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L F+K G++KR+ + D+ P GF F+E
Sbjct: 2 SVYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVE 48
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+G++ Y +T E+L E F CG I RI + +DKY P GF ++E
Sbjct: 62 SVYIGSVDYGSTPEELQEHFKSCGQINRITILVDKYSGHPKGFAYVE 108
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 47 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 102
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
G + +EK ++YVGN+ Y T E+L + F CG + R+ + DK+ P GF ++
Sbjct: 27 GPKTFEEKAEVDARSVYVGNVDYSATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYV 86
Query: 81 E 81
E
Sbjct: 87 E 87
>gi|354568213|ref|ZP_08987379.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353541178|gb|EHC10648.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TEE L +F++ G +KR+++ D+ GF F+E
Sbjct: 13 TIYVGNLSYSATEEDLKAVFAEYGQVKRVVLPTDRDTGRLRGFAFVE 59
>gi|428313300|ref|YP_007124277.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254912|gb|AFZ20871.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 97
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TEE L +F+ G +KR+++ D+ GF F+E
Sbjct: 2 TIYVGNLSYQATEEDLRTVFADYGTVKRVVLPTDRETGRMRGFAFVE 48
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 36 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 91
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 36 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 91
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DKY P GF ++E
Sbjct: 90 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIE 145
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQASLDQQTENLREDKEDI--DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGHPKGYAYVE 114
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQASLDQQTENLREDKEDI--DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGHPKGYAYVE 114
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y +T E++ F+ CG + R+ + +DKY P GF +LE
Sbjct: 95 SVFVGNVDYSSTPEEVQAHFASCGTVNRVTILVDKYTGHPKGFAYLE 141
>gi|427419443|ref|ZP_18909626.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425762156|gb|EKV03009.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 86
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN++Y ++E + E+F+ G +KR+ + +D+ P GF F+E
Sbjct: 2 SIYVGNIAYTVSQEDIQEVFADYGTVKRVTVPMDRETGRPRGFAFVE 48
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 94 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIE 149
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQASLDQQTENLREDKEDI--DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGHPKGYAYVE 114
>gi|223995751|ref|XP_002287549.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976665|gb|EED94992.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 76
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++VGNL++ TTEEQLY FS+ G I ++ M D P GF F+E
Sbjct: 1 VFVGNLAFSTTEEQLYTAFSELGRIVKVRMVSDNDTGKPRGFAFIE 46
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 52 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 107
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 52 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 107
>gi|50414059|ref|XP_457358.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
gi|49653023|emb|CAG85362.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
Length = 190
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 15 RDQHFKGSRAE----QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
R Q + RAE QE++ + ++YVGN+ Y +T EQL F G I+RI + DKY
Sbjct: 33 RPQETEEERAERLAKQEEI--DSRSVYVGNVDYQSTPEQLESFFKAVGVIERITILFDKY 90
Query: 71 KKTPCGFCFLE 81
P G+ ++E
Sbjct: 91 SGLPKGYAYVE 101
>gi|428301078|ref|YP_007139384.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428237622|gb|AFZ03412.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 105
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++YVGNLSY EE L +F++ G++KR+ M +D+ P GF F+
Sbjct: 2 SIYVGNLSYEVEEEDLKRVFAEYGNVKRVQMPVDRETGRPRGFAFV 47
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 22 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 77
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E+ R ++L V NL Y T+ +QL FS+ G+I+ + + LD Y + P GF F+E
Sbjct: 4 RERHDRRHASLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVE 59
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 66 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 121
>gi|223999207|ref|XP_002289276.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
gi|220974484|gb|EED92813.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EK + ++YVG + Y TT E+L F CG ++R+ + DK+ P GF +LE
Sbjct: 65 EKASKDGHSIYVGQVDYSTTPEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLE 119
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQATLDQQSESLREDKEEI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGQPKGYAYVE 114
>gi|443318092|ref|ZP_21047374.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442782317|gb|ELR92375.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 108
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TEE L E+F + G +KR+ + +D+ GF F+E
Sbjct: 2 TVYVGNLSYNATEEDLTEVFKEYGAVKRVQVPVDRETGRMRGFAFVE 48
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 48 EMQATLDQQSENLREDKEEI--DARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 105
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 106 FTGQPKGYAYVE 117
>gi|401400261|ref|XP_003880750.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
gi|325115161|emb|CBZ50717.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
Length = 285
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y +T +L E F CG I RI + +DKY P G+ ++E
Sbjct: 147 SVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIE 193
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQATLDQQSENLREDKEEI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGQPKGYAYVE 114
>gi|294878913|ref|XP_002768513.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871063|gb|EER01231.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 196
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVG++ Y E+L E F CG I+RI + +DKY P GF ++E
Sbjct: 100 SVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIE 146
>gi|158335180|ref|YP_001516352.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359460290|ref|ZP_09248853.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158305421|gb|ABW27038.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 82
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TE + E+F++ G +KR+++ +D+ GF F+E
Sbjct: 2 TIYIGNLSYQATENDVREVFNEYGTVKRVVLPVDRETGRMRGFAFVE 48
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQATLDQQSESLREDKEEI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGQPKGYAYVE 114
>gi|427417658|ref|ZP_18907841.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760371|gb|EKV01224.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T E + E+F + G + R+ + +D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTREDIEEVFKEYGRVNRVSLPMDRESGRPRGFAFVE 48
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQASLDQQTENLREDKEDI--DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGHPKGYAYVE 114
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
LYVGNLS+ TT E L F+ G+++ I M D+ P GF F+
Sbjct: 5 LYVGNLSFSTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFV 49
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GNLSY TE+ L ++F+ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVE 48
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 70 EMQATLDQQSESLREDKEEI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 127
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 128 FTGQPKGYAYVE 139
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EQEK ++YVGN+ Y T E+L F CG I R+ + +K+ P GF ++E
Sbjct: 185 SEQEKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIE 242
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNL Y T E L E+FS+ G +KR+ + D+ P GF F+E
Sbjct: 2 TIYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVE 48
>gi|443312655|ref|ZP_21042271.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442777374|gb|ELR87651.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TEE L +F++ G IKRI++ D+ GF F++
Sbjct: 2 TIYVGNLSYRATEEDLRTVFAEYGAIKRIVLPTDRETGRLRGFAFVD 48
>gi|172035929|ref|YP_001802430.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354556024|ref|ZP_08975322.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171697383|gb|ACB50364.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353552023|gb|EHC21421.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 98
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNL Y T E L E+FS+ G +KR+ + D+ P GF F+E
Sbjct: 2 TIYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVE 48
>gi|331215415|ref|XP_003320388.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299378|gb|EFP75969.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 195
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+ K + + ++YVGN+ Y +T E++ F+ CG I RI + DK+ P GF ++E
Sbjct: 72 EENKEVVDSRSVYVGNVDYGSTAEEIQAHFASCGTINRITILCDKFTGQPKGFAYIE 128
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DKY P GF ++E
Sbjct: 155 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIE 210
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQATLDQQSENLREDKEEI--DARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGQPKGYAYVE 114
>gi|162450147|ref|YP_001612514.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161160729|emb|CAN92034.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 95
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
LYVGNLS+ TT E L F+ G+++ I M D+ P GF F+
Sbjct: 5 LYVGNLSFNTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFV 49
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y T+ E+L F CG I R+ + LDK+ P G+ ++E
Sbjct: 73 SRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 121
>gi|434393135|ref|YP_007128082.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428264976|gb|AFZ30922.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 103
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E + +F + G++K++ + D+ P GFCF+E
Sbjct: 2 SIYVGNLSYQVTQEDILAVFGEYGNVKQVQVPTDRETGRPRGFCFVE 48
>gi|395508493|ref|XP_003758545.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Sarcophilus
harrisii]
Length = 384
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EKL ++YVGN+ Y T E+L F+ CG+I R+ + DKY P G+ ++E
Sbjct: 162 EKLEADHRSVYVGNVDYSGTAEELESHFNCCGEINRVTILCDKYSGHPKGYAYIE 216
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L + F CG I R+ + +K+ P GF ++E
Sbjct: 89 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIE 144
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L + F++ G + R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVE 48
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L + F CG I R+ + +K+ P GF ++E
Sbjct: 89 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIE 144
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EKL ++YVGN+ Y E+L + F CG I R+ + +KY P GF ++E
Sbjct: 87 EEKLEVDNRSIYVGNVDYGANAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIE 142
>gi|336373392|gb|EGO01730.1| hypothetical protein SERLA73DRAFT_70899 [Serpula lacrymans var.
lacrymans S7.3]
Length = 346
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+EK L + +++VGN+ Y T E++ F CG I R+ + DK+ P G+ ++E
Sbjct: 74 EEEKALSDSRSVFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVE 130
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T + L E F CG I RI + +DK+ P G+ ++E
Sbjct: 42 SVYVGNVEYSATPQNLQEYFKSCGQINRITIMVDKWTGHPKGYAYIE 88
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GN+ Y +T EQL FS G +KR+ + DK+ P G+ ++E
Sbjct: 52 SIYIGNVDYQSTPEQLENFFSTVGAVKRVTILFDKFSGFPKGYAYVE 98
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T++ L E+F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVE 48
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DKY P GF ++E
Sbjct: 90 EEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIE 145
>gi|221483800|gb|EEE22112.1| RNA-binding protein, putative [Toxoplasma gondii GT1]
Length = 268
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y +T +L E F CG I RI + +DKY P G+ ++E
Sbjct: 140 SVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIE 186
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TE+ L +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVE 48
>gi|338723296|ref|XP_001488137.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Equus
caballus]
Length = 271
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EK+ ++YVGN+ Y T E+L F++CG+I+R+ + DK+ P G+ ++E
Sbjct: 133 EKVQADHRSIYVGNVDYGGTAEELEAYFNQCGEIRRVTILCDKFSGHPKGYAYIE 187
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 90 EEKIEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIE 145
>gi|237843899|ref|XP_002371247.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211968911|gb|EEB04107.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221504196|gb|EEE29871.1| hypothetical protein TGVEG_008880 [Toxoplasma gondii VEG]
Length = 268
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y +T +L E F CG I RI + +DKY P G+ ++E
Sbjct: 140 SVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIE 186
>gi|427728558|ref|YP_007074795.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427364477|gb|AFY47198.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 94
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE L +F+ G++KR+++ D+ GF F+E
Sbjct: 2 TIYVGNLSYRATEADLRAVFADYGEVKRVVLPTDRETGRMRGFAFVE 48
>gi|428773895|ref|YP_007165683.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
gi|428688174|gb|AFZ48034.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
Length = 90
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L +FS G +KR+ + +D+ K GF F+E
Sbjct: 2 SIYVGNLSYDVTEEDLQTVFSDYGQVKRVYLPVDRETKRMRGFGFVE 48
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+E+ + ++YVGN+ Y T E++ + F CG I R+ + DK+ P GF ++E
Sbjct: 89 EEEREEVDSRSIYVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVE 145
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ S LYVGNLS+ TTEE+L F + G + + + +DK P GF F+
Sbjct: 2 SNSKLYVGNLSFKTTEEELRSAFGQFGSVTDVYVAMDKMTGRPRGFAFV 50
>gi|353235207|emb|CCA67223.1| related to poly(a) binding protein II [Piriformospora indica DSM
11827]
Length = 173
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T E++ F+ CG I R+ + LDK+ P G+ ++E
Sbjct: 91 SIYVGNVDYGATPEEIQAHFASCGTINRVTILLDKFTGHPKGYAYVE 137
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++ L+VGNLS+ TE+ L+E FS+ GD+K + + D+ +P GF ++E
Sbjct: 413 SAVLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVE 461
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E++ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 47 EERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 102
>gi|395644710|ref|ZP_10432570.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM
4140]
gi|395441450|gb|EJG06207.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM
4140]
Length = 86
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%), Gaps = 2/34 (5%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIK--RII 64
+STLYVGNL+Y TTEEQL ELFS GD+K RII
Sbjct: 3 SSTLYVGNLNYETTEEQLSELFSAYGDVKSARII 36
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E++K ++YVGN+ Y T E++ + F CG I R+ + DK+ P G+ ++E
Sbjct: 44 EEDKAAADARSIYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVE 100
>gi|395645925|ref|ZP_10433785.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM
4140]
gi|395442665|gb|EJG07422.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM
4140]
Length = 86
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TS LYVGNL+Y TE+QL ELFS+ GD+K + + DK GF F+E
Sbjct: 3 TSRLYVGNLTYSVTEKQLEELFSQYGDVKSVKIIGDK------GFGFVE 45
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L +F++ G ++R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVE 48
>gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
gi|46098206|gb|EAK83439.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
Length = 204
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+E+ + ++YVGN+ Y T E++ + F CG I R+ + DK+ P GF ++E
Sbjct: 86 EEEREEVDSRSIYVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVE 142
>gi|332710459|ref|ZP_08430406.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332350790|gb|EGJ30383.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 93
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE+ L +F G +KR++M D+ GF F+E
Sbjct: 2 TIYVGNLSYQATEDDLKTVFGDYGTVKRVVMPTDRETGKMRGFAFVE 48
>gi|428208524|ref|YP_007092877.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010445|gb|AFY89008.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 105
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++YVGNLSY EE+L ++FS+ G +KR+ + D+ P GF F+
Sbjct: 2 SVYVGNLSYQVAEEELSKVFSEYGTVKRVQLPTDRETGRPRGFAFV 47
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+S L+VGNLS+ TEEQL+E+FS G IK + M + P GF ++E
Sbjct: 138 SSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVE 186
>gi|145499158|ref|XP_001435565.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402698|emb|CAK68168.1| unnamed protein product [Paramecium tetraurelia]
Length = 601
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
+VE + RDQ + + Q+ ++T +VGNLS+Y TE+ LY +F CG IK + +
Sbjct: 423 TVEKTKPRDQ--RPQQGGQQGGQGESTTCFVGNLSFYATEDSLYPIFEDCGKIKEVRIAK 480
Query: 68 DKYKKTPCGFCFLE 81
D K+ GF ++E
Sbjct: 481 DAEGKSR-GFGYVE 493
>gi|334118594|ref|ZP_08492683.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
gi|333459601|gb|EGK88214.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
Length = 95
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TEE L +F++ G +KR+++ D+ GF F+E
Sbjct: 2 TIYIGNLSYRATEEDLTAVFAEYGTVKRVVLPTDRETGRMRGFAFVE 48
>gi|290988331|ref|XP_002676875.1| predicted protein [Naegleria gruberi]
gi|284090479|gb|EFC44131.1| predicted protein [Naegleria gruberi]
Length = 260
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM-GLDKYKK-TPCGFCFLE 81
T+ TL+VGN+ Y T+EEQ+ E+F K G I R+ M +DK KK + +CF+E
Sbjct: 58 TSRTLFVGNIPYETSEEQIREIFDKFGPIIRVAMCSMDKKKKESGYAYCFVE 109
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++Y+G + Y +T E+L + F CG + R+ + DKY P GF ++E
Sbjct: 80 EEKVDADNRSIYIGQVDYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKGFAYIE 135
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVG + Y TT E+L + F CG + R+ + DK+ P GF ++E
Sbjct: 82 EEKMETDNRSIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIE 137
>gi|428320405|ref|YP_007118287.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
gi|428244085|gb|AFZ09871.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
Length = 95
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TEE L +F++ G +KR+++ D+ GF F+E
Sbjct: 2 TIYIGNLSYRATEEDLKAVFAEYGTVKRVVLPTDRETGRMRGFAFVE 48
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ + ++YVGN+ Y +T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 83 EDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIE 138
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVG + Y TT E+L + F CG + R+ + DK+ P GF ++E
Sbjct: 82 EEKMETDNRSIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIE 137
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 44 EMQASLDQQSESLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|402217494|gb|EJT97574.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T + F+ CG I R+ + DK+ P GFC++E
Sbjct: 95 SVYVGNVDYSATPTDISNHFASCGQINRVTIVCDKFSGHPKGFCYIE 141
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 31 RTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
R + ++VGN+ + TTEEQL+E+FS+ G I I + LD P GF F+E
Sbjct: 6 RDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVE 56
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ + ++YVGN+ Y +T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 83 EDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIE 138
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
A+QE+ + ++YVGN+ Y T EQL E F G I R+ + DKY P G+ ++E
Sbjct: 27 AKQEEA--DSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTILFDKYSGLPKGYAYVE 82
>gi|354545626|emb|CCE42354.1| hypothetical protein CPAR2_809030 [Candida parapsilosis]
Length = 345
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 19 FKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFC 78
F+G R E+E L + L+VGNLS+ TTE+ L E F CGDI RI M + GF
Sbjct: 161 FEG-RPEKESKLPPSRILFVGNLSFDTTEDNLREHFQHCGDIVRIRMATFQDTGKCKGFA 219
Query: 79 FLE 81
F++
Sbjct: 220 FID 222
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DKY P GF ++E
Sbjct: 126 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIE 181
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 44 EMQASLDQQSESLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY EE L +F + G +KRI + D+ P GF F+E
Sbjct: 2 SIYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVE 48
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNLSY TEE+L E+F++ G+I + + DKY GF F+E
Sbjct: 2 NIYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFVE 48
>gi|427708129|ref|YP_007050506.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427360634|gb|AFY43356.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE L +F+ G++KR+++ D+ GF F+E
Sbjct: 2 TIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVE 48
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ + ++YVGN+ Y +T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 83 EDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIE 138
>gi|240281788|gb|EER45291.1| RNP domain-containing protein [Ajellomyces capsulatus H143]
Length = 188
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 44 EMQASLDQQSESLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y T+ E+L F CG I R+ + LDK+ P G+ ++E
Sbjct: 62 SIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 108
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 23 RAEQEKLLRTTSTL------------YVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
RA QE+L T L YVGN+ Y T E+L F+ CG + R+ + DK+
Sbjct: 32 RAMQEQLDNETEALRNDKESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKF 91
Query: 71 KKTPCGFCFLE 81
P GF ++E
Sbjct: 92 TGHPKGFAYIE 102
>gi|367041013|ref|XP_003650887.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
gi|346998148|gb|AEO64551.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
Length = 193
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y T+ E+L F CG I R+ + LDK+ P G+ ++E
Sbjct: 69 SIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGHPKGYAYVE 115
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GNLSY T+E L E F++ G + R+ + D+ P GF F+E
Sbjct: 2 SIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVE 48
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGN+SY T E L E+F G +KR+ + D+ P GF F+E
Sbjct: 2 TIYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVE 48
>gi|443895148|dbj|GAC72494.1| splicing factor RNPS1, partial [Pseudozyma antarctica T-34]
Length = 160
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E+E+ + ++YVGN+ Y T E+L + F CG I R+ + DK+ P G+ ++E
Sbjct: 82 SEEEREEVDSRSIYVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVE 139
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L +F + G + R+ M D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVE 48
>gi|218246364|ref|YP_002371735.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257059410|ref|YP_003137298.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166842|gb|ACK65579.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589576|gb|ACV00463.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 92
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TE L +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTEADLNSVFAEYGSVKRVHVPTDRDTGRPRGFAFVE 48
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EQEK ++YVGN+ Y T E+L F CG I R+ + +K+ P GF ++E
Sbjct: 102 SEQEKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIE 159
>gi|126136038|ref|XP_001384543.1| hypothetical protein PICST_45495 [Scheffersomyces stipitis CBS
6054]
gi|126091741|gb|ABN66514.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 155
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
A+QE++ ++YVGN+ Y +T EQL E F G I+R+ + D+Y P G+ ++E
Sbjct: 26 AKQEEI--DGRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRYSGLPKGYAYVE 81
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 230 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 285
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 246
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 246
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 196 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 251
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 219
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L +F++ G +K++ + D+ P GF F+E
Sbjct: 2 SVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVE 48
>gi|434395314|ref|YP_007130261.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267155|gb|AFZ33101.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE+ L +F++ G +KRI++ D+ GF F++
Sbjct: 2 TIYVGNLSYRATEDDLRAVFAEYGTVKRIVLPTDRETGRMRGFAFVD 48
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L F++ G + R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVE 48
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 246
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L FS+ G + R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVE 48
>gi|209877356|ref|XP_002140120.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555726|gb|EEA05771.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 206
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GN+ Y T +L ELF CG I RI + DK P GF +LE
Sbjct: 67 SIYIGNVDYGTKPTELQELFKSCGSINRITIMNDKRTGMPKGFAYLE 113
>gi|225558865|gb|EEH07148.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 150
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 44 EMQASLDQQSESLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|254414476|ref|ZP_05028242.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196178706|gb|EDX73704.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TE+ L +F+ G +KR+++ D+ GF F+E
Sbjct: 2 TIYIGNLSYQATEDDLQTVFADYGTVKRVVLPTDRETGRVRGFAFVE 48
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 246
>gi|325087930|gb|EGC41240.1| RNP domain-containing protein [Ajellomyces capsulatus H88]
Length = 170
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 44 EMQASLDQQSESLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+E+ + ++YVGN+ Y T E+L + F CG I R+ + DK+ P G+ ++E
Sbjct: 87 EEEREEVDSRSIYVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVE 143
>gi|17231514|ref|NP_488062.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75907900|ref|YP_322196.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|81818528|sp|Q44556.3|RBPD_NOSS1 RecName: Full=Putative RNA-binding protein RbpD
gi|1064779|dbj|BAA08403.1| RNA-binding protein [Anabaena variabilis]
gi|17133157|dbj|BAB75721.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75701625|gb|ABA21301.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 94
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE L +F+ G++KR+++ D+ GF F+E
Sbjct: 2 TIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVE 48
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ ++YVGN+ Y T E+L F CG I R+ + DK+ P GF ++E
Sbjct: 40 EDKMEADGRSVYVGNVDYGATAEELEAHFHGCGSINRVTILCDKFTGHPKGFAYIE 95
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E E+ ++++GN+ Y +T E++ + F CG I R+ + DK+ P GF ++E
Sbjct: 73 EDERAQADQRSIFIGNVDYASTPEEIQQHFQACGTINRVTILCDKFTGHPKGFAYVE 129
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EQEK ++YVGN+ Y T E+L F CG I R+ + +K+ P GF ++E
Sbjct: 102 SEQEKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIE 159
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 223 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 278
>gi|344299871|gb|EGW30224.1| hypothetical protein SPAPADRAFT_144523 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 23 RAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ ++EK ++Y+GN+ Y +T +L + FS CG + R+ + ++K+ P GF +LE
Sbjct: 83 QTDEEKRDVDARSIYIGNVDYGSTPLELQQHFSSCGIVNRVTILMNKHTGQPKGFAYLE 141
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L +F++ G ++R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVE 48
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 219
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 246
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 246
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++++ ++YVGN+ Y+ T E++ + F+ CG I R+ + DKY P G+ ++E
Sbjct: 105 SDEDRQAVDARSIYVGNVDYHATPEEIQQHFASCGTINRVTILFDKYTG-PKGYAYVE 161
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 162 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 217
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 215
>gi|162455777|ref|YP_001618144.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161166359|emb|CAN97664.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 107
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
LYVGNLSY T+ E L F+ G+++ + M D+ P GF F+
Sbjct: 5 LYVGNLSYNTSRESLEAAFAGSGEVREVAMPTDRETGQPRGFAFV 49
>gi|66475216|ref|XP_627424.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
Length = 262
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
S D GS A+ E++ R+ +Y+GN+ Y T +L +LF CG I RI + DK
Sbjct: 93 SMMDTDLPGS-ADDEEMKRS---IYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTG 148
Query: 73 TPCGFCFLE 81
P GF +LE
Sbjct: 149 MPKGFAYLE 157
>gi|344292774|ref|XP_003418100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Loxodonta africana]
Length = 280
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
QEK ++YVGN+ Y T E+L F+ CG+I R+ + DK+ P G+ ++E
Sbjct: 141 QEKEEVDHRSIYVGNVDYGATAEELEAYFNPCGEIHRVTILCDKFSGHPKGYAYIE 196
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TE+ L +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTEQDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVE 48
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 215
>gi|411119073|ref|ZP_11391453.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710936|gb|EKQ68443.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 85
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY T + L E+F++ G +KR+ + +D+ GF F+E
Sbjct: 2 TIYVGNLSYRATADDLTEVFAEYGAVKRVSLPMDRETGKMRGFAFVE 48
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++Y+GN+ Y T E+L + F CG I R+ + +K+ P GF ++E
Sbjct: 88 EEKIETDNRSVYIGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIE 143
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S++YVG + Y +T E+L LF CG I R+ + DK+ P G+ ++E
Sbjct: 111 SSVYVGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIE 158
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 215
>gi|341904125|gb|EGT59958.1| hypothetical protein CAEBREN_16301 [Caenorhabditis brenneri]
Length = 336
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++E
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSRHPKGFAYVE 125
>gi|189219581|ref|YP_001940222.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
gi|189186439|gb|ACD83624.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
Length = 117
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T++ LYVGNL Y T+ L+E+F+K G IK + + D+ GF F+E
Sbjct: 29 TSNKLYVGNLPYNLTDSDLFEIFAKIGPIKNVEIVRDRKSNRTKGFGFVE 78
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L + F CG I R+ + +++ P GF ++E
Sbjct: 92 EEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNRFDGHPKGFAYIE 147
>gi|282898657|ref|ZP_06306645.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281196525|gb|EFA71434.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 96
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TE L +F+ G++KR+++ D+ GF F+E
Sbjct: 2 TIYIGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGKMRGFAFVE 48
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+STL+VGNLS+ +E+ L+E F+ GD+K + M D+ P GF +++
Sbjct: 399 SSTLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPKGFAYVD 447
>gi|336386223|gb|EGO27369.1| hypothetical protein SERLADRAFT_446592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 338
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+EK L + +++VGN+ Y T E++ F CG I R+ + DK+ P G+ ++E
Sbjct: 74 EEEKALSDSRSVFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVE 130
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ + +++VGN+ Y T EQL F CG I R+ + D+Y P GF ++E
Sbjct: 79 EEKIEVDSRSVFVGNVDYGATAEQLEAHFHGCGAINRVTILCDRYSGRPKGFAYVE 134
>gi|67969697|dbj|BAE01197.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + D++ P GF ++E
Sbjct: 4 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDEFSGHPKGFAYIE 59
>gi|392592926|gb|EIW82252.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 16 DQHFKGSRAE-----QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKY 70
DQ +G E ++K + ++YVGN+ Y T E++ F CG I R+ + DK+
Sbjct: 60 DQSGEGGSGEAMDTLEDKQAADSRSVYVGNVDYGATPEEIQAHFQACGTINRVTILCDKF 119
Query: 71 KKTPCGFCFLE 81
P GF ++E
Sbjct: 120 TGHPKGFAYVE 130
>gi|328860711|gb|EGG09816.1| hypothetical protein MELLADRAFT_29239 [Melampsora larici-populina
98AG31]
Length = 150
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+++ + ++YVGN+ Y +T E++ FS CG I RI + DK+ P G+ ++E
Sbjct: 44 EEDREAVDSRSVYVGNVDYGSTAEEIQAHFSSCGTINRITILCDKFTGQPKGYAYIE 100
>gi|321477676|gb|EFX88634.1| hypothetical protein DAPPUDRAFT_206317 [Daphnia pulex]
Length = 222
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ +++VGN+ Y T E+L + F CG I R+ + +K+ P GF ++E
Sbjct: 89 EEKMEVDARSVFVGNVDYGATAEELEQHFHGCGSINRVTILCNKWDGQPKGFAYIE 144
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+L +++++VGNL + T++ LYE+F CG I R M D+ P GF +++
Sbjct: 609 HHELGEKSASVFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYID 664
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ QE + R+ S +++GNL + T+E L ++FS CGDI+R+ + D GF FL+
Sbjct: 503 SAQESVERSKS-VFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLD 559
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 154 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIE 209
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK ++YVGN+ Y T E++ + F CG + R+ + D++ P GF ++E
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVE 125
>gi|300869358|ref|ZP_07113948.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
gi|300332657|emb|CBN59146.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
Length = 106
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+LYVGNLSY T+E + +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SLYVGNLSYQVTQEDIITVFAEYGTVKRVHLPTDRETGRPRGFGFVE 48
>gi|330836185|ref|YP_004410826.1| RNP-1 like RNA-binding protein [Sphaerochaeta coccoides DSM
17374]
gi|329748088|gb|AEC01444.1| RNP-1 like RNA-binding protein [Sphaerochaeta coccoides DSM
17374]
Length = 91
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGN++Y TTE+QL +LF++ G + + +D+ P GF F+E
Sbjct: 5 IYVGNMNYRTTEDQLRDLFAQYGTVSSANIIIDRETHRPKGFAFVE 50
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P GF ++E
Sbjct: 74 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVE 120
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P GF ++E
Sbjct: 94 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVE 140
>gi|164651984|gb|ABY64767.1| ePABP2 [Homo sapiens]
Length = 278
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S +EK+ ++YVGN+ Y + E+L FS+CG++ R+ + DK+ P G+ ++E
Sbjct: 135 SGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIE 194
>gi|312283705|ref|NP_001073956.2| embryonic polyadenylate-binding protein 2 [Homo sapiens]
gi|205716472|sp|A6NDY0.1|EPAB2_HUMAN RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
Length = 278
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S +EK+ ++YVGN+ Y + E+L FS+CG++ R+ + DK+ P G+ ++E
Sbjct: 135 SGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIE 194
>gi|151555091|gb|AAI48674.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|162319022|gb|AAI56596.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|261860988|dbj|BAI47016.1| Embryonic polyadenylate-binding protein 2 [synthetic construct]
Length = 289
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S +EK+ ++YVGN+ Y + E+L FS+CG++ R+ + DK+ P G+ ++E
Sbjct: 135 SGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIE 194
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ R ++E + + +++VGN+ Y + E + F CG I R+ + LDK
Sbjct: 44 EMQATLDQQSTDLREDKEDI--DSRSIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 155 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIE 210
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
S D GS A+ E++ R+ +Y+GN+ Y T +L +LF CG I RI + DK
Sbjct: 94 SMMDTDLPGS-ADDEEMKRS---IYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTG 149
Query: 73 TPCGFCFLE 81
P GF +LE
Sbjct: 150 MPKGFAYLE 158
>gi|282896900|ref|ZP_06304906.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198309|gb|EFA73199.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 92
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TE L +F+ G++KR+++ D+ GF F+E
Sbjct: 2 TIYIGNLSYRATEADLKSVFADYGEVKRVVLPTDRETGKMRGFAFVE 48
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 166 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 221
>gi|126140476|ref|XP_001386760.1| hypothetical protein PICST_50467 [Scheffersomyces stipitis CBS
6054]
gi|126094044|gb|ABN68731.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 10 ELSSYRDQHFKGS----RAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
EL S D+ KG + ++EK + ++Y+GN+ Y +T +L + FS G +KR+ +
Sbjct: 61 ELHSQLDEQQKGGDGIPQTDEEKRDIDSRSVYIGNVDYGSTPLELQQHFSSAGIVKRVTI 120
Query: 66 GLDKYKKTPCGFCFLE 81
+K+ P GF +LE
Sbjct: 121 LTNKFTGQPKGFAYLE 136
>gi|384915859|ref|ZP_10016064.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
gi|384526721|emb|CCG91935.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
Length = 255
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L T++ LYVGNL Y T+ L+E+F+K G IK + + D+ GF F+E
Sbjct: 165 LVTSNKLYVGNLPYNLTDSDLFEIFAKVGPIKNVEIIRDRRTNRTKGFGFVE 216
>gi|425440323|ref|ZP_18820628.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
gi|389719274|emb|CCH96866.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
Length = 97
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L ++F++ G +KR+ + LDK + GF F+E
Sbjct: 2 SIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPLDKETQRKRGFAFVE 48
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 219
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL+Y TEE L +F++ G ++R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVE 48
>gi|395748220|ref|XP_003778730.1| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Pongo abelii]
Length = 278
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + E+L FS+CG++ R+ + DK+ P G+ ++E
Sbjct: 139 EEKVEAXHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIE 194
>gi|217032518|ref|ZP_03438009.1| hypothetical protein HPB128_180g17 [Helicobacter pylori B128]
gi|298736531|ref|YP_003729057.1| hypothetical protein HPB8_1036 [Helicobacter pylori B8]
gi|385216062|ref|YP_005776019.1| RNA binding protein [Helicobacter pylori F32]
gi|420467211|ref|ZP_14965966.1| RNA binding protein [Helicobacter pylori Hp H-9]
gi|216945796|gb|EEC24419.1| hypothetical protein HPB128_180g17 [Helicobacter pylori B128]
gi|298355721|emb|CBI66593.1| conserved hypothetical protein [Helicobacter pylori B8]
gi|317180591|dbj|BAJ58377.1| RNA binding protein [Helicobacter pylori F32]
gi|393084039|gb|EJB84736.1| RNA binding protein [Helicobacter pylori Hp H-9]
Length = 82
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y TT EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSTTSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 9 VELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+E S+ D H AE+++ + T L+V NL Y TEE+L ELF K G++ + + LD
Sbjct: 305 IEQSAEGDAHVAPVLAEEQESVSETGRLFVRNLPYTATEEELAELFGKFGELSEVHLVLD 364
Query: 69 KYKKTPCGFCFL 80
K K F+
Sbjct: 365 KTTKRSKAMAFV 376
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 219
>gi|862465|dbj|BAA04177.1| ss-DNA binding protein 12RNP2 precursor [Synechococcus elongatus
PCC 6301]
Length = 100
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLS+ TEE + E+F++ G + R+ + +D+ GF F+E
Sbjct: 2 TIYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIE 48
>gi|156059388|ref|XP_001595617.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980]
gi|154701493|gb|EDO01232.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 182
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ R ++E + + +++VGN+ Y + E + F CG I R+ + LDK
Sbjct: 44 EMQATLDQQSTDLREDKEDI--DSRSIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + E+L FS+CG++ R+ + DK+ P G+ ++E
Sbjct: 136 EEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIE 191
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 146 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 201
>gi|397468279|ref|XP_003805819.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan paniscus]
Length = 278
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + E+L FS+CG++ R+ + DK+ P G+ ++E
Sbjct: 139 EEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIE 194
>gi|332846661|ref|XP_003315290.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan
troglodytes]
Length = 266
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + E+L FS+CG++ R+ + DK+ P G+ ++E
Sbjct: 139 EEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIE 194
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 133 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 188
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 219
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T E+L + F CG + R+ + DK+ P GF ++E
Sbjct: 12 SVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIE 58
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y +T E+L F +CG I R+ + DK+ P GF ++E
Sbjct: 73 SVYVGNVDYGSTPEELQAHFKECGTINRVTILCDKFTGHPKGFAYIE 119
>gi|428298449|ref|YP_007136755.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428234993|gb|AFZ00783.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE L +F+ G++KR+++ D+ GF F++
Sbjct: 2 TIYVGNLSYRATEADLRAVFADYGEVKRVVLPTDRESGRLRGFAFVD 48
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 131 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 186
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK ++YVGN+ Y T E++ + F CG + R+ + DK+ P GF ++E
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVE 125
>gi|425444904|ref|ZP_18824945.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
gi|389735245|emb|CCI01218.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
Length = 97
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L ++F++ G +KR+ + LDK + GF F+E
Sbjct: 2 SIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPLDKDTQRKRGFAFVE 48
>gi|344302535|gb|EGW32809.1| hypothetical protein SPAPADRAFT_60154 [Spathaspora passalidarum
NRRL Y-27907]
Length = 171
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 7 PSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMG 66
P E +S D A+QE++ + ++YVGN+ Y +T EQL + F G I+R+ +
Sbjct: 8 PVQESNSQSDVDNAEKLAKQEEI--DSRSIYVGNVDYQSTPEQLEQFFHVVGIIERVTIL 65
Query: 67 LDKYKKTPCGFCFLE 81
D++ P G+ ++E
Sbjct: 66 FDRFSGLPKGYAYIE 80
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ ++YVGN+ Y T E+L + F CG I R+ + +K+ P GF ++E
Sbjct: 92 EDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIE 147
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK ++YVGN+ Y T E++ + F CG + R+ + DK+ P GF ++E
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVE 125
>gi|374316448|ref|YP_005062876.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359352092|gb|AEV29866.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 92
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGN+SY T+EE+L +LFS+ G + + +D+ + P GF F+E
Sbjct: 5 IYVGNMSYNTSEEELRDLFSQYGTVLSASIIIDRETRRPKGFGFVE 50
>gi|325972712|ref|YP_004248903.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027950|gb|ADY14709.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 92
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNLSY T+EE+L +LF++ G + + +D+ + P GF F+E
Sbjct: 5 IYVGNLSYNTSEEELRDLFAQYGTVVSANIIIDRETRRPKGFGFVE 50
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + ++E + +++VGN+ Y T+ E+L F CG I R+ + LDK
Sbjct: 105 EMQASLDQARQDLSEDKEDI--DNRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDK 162
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 163 FTGQPKGYAYVE 174
>gi|255569758|ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein, putative [Ricinus communis]
Length = 198
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ S +D S+A +E++ + +++VGN+ Y T E++ + F CG + RI + DK
Sbjct: 48 EMGSSQDPTAAASQANREEV--DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK 105
Query: 70 YKKTPCGFCFLE 81
Y + P G+ ++E
Sbjct: 106 YGQ-PKGYAYVE 116
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain
Of Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain
Of Xenopus Laevis Epabp2
Length = 124
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
AE++K + S +YVGN+ Y +T + L FS CG I RI + DK+ P G+ ++E
Sbjct: 28 AEEKKEIDKRS-VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIE 84
>gi|428208904|ref|YP_007093257.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010825|gb|AFY89388.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 103
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L ++F+ G + R+ + +D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVE 48
>gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35211955|dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 122
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TL+VGNL + TE+++ E F++ G++K + + +D+ P GF F++
Sbjct: 2 TLFVGNLPFSATEQEIVEAFTEYGEVKSVKIPMDRETGRPRGFAFVD 48
>gi|341895192|gb|EGT51127.1| hypothetical protein CAEBREN_00953 [Caenorhabditis brenneri]
Length = 205
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK ++YVGN+ Y T E++ + F CG + R+ + DK+ P GF ++E
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVE 125
>gi|425444903|ref|ZP_18824944.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
gi|389735244|emb|CCI01217.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
Length = 97
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L E+F++ G +KR+ + +DK + GF F+E
Sbjct: 2 SIFVGNLSYDISQEDLVEVFAEYGKVKRVHIPVDKETQRKRGFAFVE 48
>gi|302791513|ref|XP_002977523.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
gi|300154893|gb|EFJ21527.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
Length = 233
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TL++G LSY TTE +L F + G +KR+ + DK+ P G+ F+E
Sbjct: 97 TLFIGKLSYDTTEHRLQREFERYGPVKRVRLVHDKHTDKPRGYAFVE 143
>gi|71026927|ref|XP_763107.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350060|gb|EAN30824.1| RNA binding protein, putative [Theileria parva]
Length = 151
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T ++L E F G I RI + +DKY P G+ ++E
Sbjct: 43 SIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKYTGHPKGYAYVE 89
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+ S LYVGN+S+ T+E++L F + G++ + + +DK P GF F+
Sbjct: 2 SNSKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFV 50
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 93 EDKVEVDARSVYVGNVDYSATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIE 148
>gi|443311860|ref|ZP_21041483.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442778096|gb|ELR88366.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 107
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++YVGNLSY EE + +F + G++K++ + +D+ P GFCF+
Sbjct: 2 SIYVGNLSYQVNEEDVTAVFKEYGNVKQVQVPMDRETGRPRGFCFV 47
>gi|384099683|ref|ZP_10000766.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
gi|383832219|gb|EID71694.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
Length = 92
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++VGNLS+ T+EEQL ++F+ G++ + + +D Y GF F+E
Sbjct: 2 NIFVGNLSFQTSEEQLLDVFTPFGEVSSVKVIVDGYSNRSRGFAFVE 48
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E++ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 224 EERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 279
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 75 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 130
>gi|186681440|ref|YP_001864636.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186463892|gb|ACC79693.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 106
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTQEDLSGIFAEYGTVKRVQVPTDRETGRPRGFAFVE 48
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 90 EEKIEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIE 145
>gi|334120717|ref|ZP_08494795.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
gi|333455989|gb|EGK84627.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
Length = 110
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E + +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYQVTQEDITTVFAEYGTVKRVHLPTDRETSRPRGFGFVE 48
>gi|428319314|ref|YP_007117196.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
gi|428242994|gb|AFZ08780.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
Length = 108
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E + +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYQVTQEDITTVFAEYGTVKRVHLPTDRETSRPRGFGFVE 48
>gi|432874359|ref|XP_004072458.1| PREDICTED: probable RNA-binding protein 19-like [Oryzias latipes]
Length = 921
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T L+V NL Y TEE + ELFSK G + ++ +D K P GF F+
Sbjct: 397 TGRLFVRNLPYTCTEEDIRELFSKHGPLSEVLFPIDNLTKKPKGFAFV 444
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIK 61
STL++ NLS+ TTEE+L E FSKCG +K
Sbjct: 696 STLFIKNLSFITTEEKLQETFSKCGKVK 723
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E + +F++ G ++R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVE 48
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + + ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 46 EMQATLDQQSESLKEDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 103
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 104 FTGQPKGYAYVE 115
>gi|56752106|ref|YP_172807.1| RRM type RNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81300808|ref|YP_401016.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
gi|56687065|dbj|BAD80287.1| RRM type RNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81169689|gb|ABB58029.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
Length = 95
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLS+ TEE + E+F++ G + R+ + +D+ GF F+E
Sbjct: 2 TIYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIE 48
>gi|68483054|ref|XP_714561.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
gi|46436140|gb|EAK95508.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
Length = 163
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
A+QE++ ++YVGN+ Y +T EQL E F G I+R+ + D++ P G+ ++E
Sbjct: 20 AKQEEI--DGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIE 75
>gi|428305437|ref|YP_007142262.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246972|gb|AFZ12752.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 102
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L E+F++ G +KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYQVTEEDLTEVFAEYGTVKRVQLPTDRETGRMRGFGFVE 48
>gi|341898366|gb|EGT54301.1| hypothetical protein CAEBREN_10290 [Caenorhabditis brenneri]
Length = 223
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK ++YVGN+ Y T E++ + F CG + R+ + DK+ P GF ++E
Sbjct: 88 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVE 143
>gi|326482748|gb|EGE06758.1| RNP domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 122
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQASLDQQTENLREDKEDI--DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGF 77
+ P GF
Sbjct: 103 FTGHPKGF 110
>gi|241952250|ref|XP_002418847.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223642186|emb|CAX44153.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 163
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 26 QEKLLRTTS----TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
QE+L + ++YVGN+ Y +T EQL E F G I+R+ + D++ P G+ ++E
Sbjct: 16 QERLAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIE 75
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 133 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 188
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 15 RDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
R Q F R+ +TLY+G LSY E+ +YE F GDI+R+ + D+ P
Sbjct: 298 RAQKFNDQRSA------PAATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAP 351
Query: 75 CGFCFLE 81
GF ++E
Sbjct: 352 KGFGYVE 358
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 133 EEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 188
>gi|384494630|gb|EIE85121.1| hypothetical protein RO3G_09831 [Rhizopus delemar RA 99-880]
Length = 203
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
K E++K + ++YVGN+ Y + E+L F CG I R+ + DK+ P G+ +
Sbjct: 65 KSMHPEEDKEAVDSRSVYVGNVDYGASPEELQAHFQSCGTINRVTILCDKFTGHPKGYAY 124
Query: 80 LE 81
+E
Sbjct: 125 VE 126
>gi|434386342|ref|YP_007096953.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus
PCC 6605]
gi|428017332|gb|AFY93426.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus
PCC 6605]
Length = 95
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TEE L +F G +KR+++ D+ GF F+E
Sbjct: 2 TIYIGNLSYQATEEDLKTVFEDYGTVKRVVLPTDRETGRMRGFAFVE 48
>gi|297284777|ref|XP_001117810.2| PREDICTED: embryonic polyadenylate-binding protein 2-like,
partial [Macaca mulatta]
Length = 147
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + E+L FS CG++ R+ + DK+ P G+ ++E
Sbjct: 8 EEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIE 63
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GNL Y T ++L + F CG I RI + +K+ P GF ++E
Sbjct: 125 SVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIE 171
>gi|428768443|ref|YP_007160233.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682722|gb|AFZ52189.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY +E L +F+ G++KR+ + LD+ K GF F+E
Sbjct: 2 SIYVGNLSYDISENDLQSVFADYGEVKRVYLPLDRETKRKRGFGFVE 48
>gi|405978177|gb|EKC42587.1| Polyadenylate-binding protein 2 [Crassostrea gigas]
Length = 244
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +EK+ ++YVGN+ Y T E+L + F CG + R+ + DK+ P GF ++E
Sbjct: 91 SAEEKMDADARSVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFTGHPKGFAYVE 148
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL+Y T+ L +FS G +KRI + D+ P GF F+E
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRIHIPTDRETGRPRGFAFVE 48
>gi|68482858|ref|XP_714655.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|46436241|gb|EAK95607.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|238883823|gb|EEQ47461.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 163
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
A+QE++ ++YVGN+ Y +T EQL E F G I+R+ + D++ P G+ ++E
Sbjct: 20 AKQEEI--DGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIE 75
>gi|355710480|gb|EHH31944.1| hypothetical protein EGK_13114 [Macaca mulatta]
Length = 241
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + E+L FS CG++ R+ + DK+ P G+ ++E
Sbjct: 152 EEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIE 207
>gi|427719763|ref|YP_007067757.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427352199|gb|AFY34923.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 94
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE L +F+ G++KR+++ D+ GF F++
Sbjct: 2 TIYVGNLSYRATEADLRAVFADYGEVKRVVLPTDRETGRLRGFAFVD 48
>gi|434406111|ref|YP_007148996.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
gi|428260366|gb|AFZ26316.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
Length = 94
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE L +F+ G++KR+++ D+ GF F++
Sbjct: 2 TIYVGNLSYQATEADLKSVFADYGEVKRVVLPTDRETGRLRGFAFVD 48
>gi|346326841|gb|EGX96437.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 201
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 78 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVE 124
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
AE++K + S +YVGN+ Y +T + L FS CG I RI + DK+ P G+ ++E
Sbjct: 84 AEEKKEIDKRS-VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIE 140
>gi|328768093|gb|EGF78140.1| hypothetical protein BATDEDRAFT_91010 [Batrachochytrium
dendrobatidis JAM81]
Length = 182
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GN+ Y T E++ F CG I R+ + DK+ P GF +LE
Sbjct: 70 SVYIGNVDYSATPEEIQAHFQSCGTINRVTILCDKFTGHPKGFAYLE 116
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + D+ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 44 EMQASLDKQSENLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++KL + ++++GN+ Y T E+L F CG + R + DK+ P GF ++E
Sbjct: 36 EDKLDADSRSIWIGNVDYAATAEELGSHFHGCGSVNRATILCDKFSGHPKGFAYVE 91
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++ L+VGNLS+ TE+Q++E+F + GD+K + + D+ P GF ++E
Sbjct: 396 SAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVE 444
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ ++YVGN+ Y T E+L + F CG + R+ + +K+ P GF ++E
Sbjct: 92 EDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIE 147
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
AE++K + S +YVGN+ Y +T + L FS CG I RI + DK+ P G+ ++E
Sbjct: 84 AEEKKEIDKRS-VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIE 140
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + D+ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 44 EMQASLDKQSENLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ ++E + + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQASLDQQSSEMHDDKEDI--DSRSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGQPKGYAYVE 114
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ ++YVGN+ Y T E+L + F CG + R+ + +K+ P GF ++E
Sbjct: 92 EDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIE 147
>gi|302659609|ref|XP_003021492.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
gi|291185395|gb|EFE40874.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
Length = 126
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQASLDQQTENLREDKEDI--DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFC 78
+ P GF
Sbjct: 103 FTGHPKGFV 111
>gi|270010528|gb|EFA06976.1| hypothetical protein TcasGA2_TC009936 [Tribolium castaneum]
Length = 469
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 31 RTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++ ++VGNL + T+E++ E FSK GDI+ + + DK+ P GF ++E
Sbjct: 336 KSRYVVFVGNLPFDATKEEIVEHFSKAGDIRHVRIPTDKHSNKPRGFAYVE 386
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
AE++K + S +YVGN+ Y +T + L FS CG I RI + DK+ P G+ ++E
Sbjct: 84 AEEKKEIDKRS-VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIE 140
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + D+ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 44 EMQASLDKQSENLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 101
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 102 FTGHPKGYAYVE 113
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ ++YVGN+ Y T E+L + F CG + R+ + +K+ P GF ++E
Sbjct: 92 EDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIE 147
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ ++YVGN+ Y T E+L + F CG + R+ + +K+ P GF ++E
Sbjct: 92 EDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIE 147
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++K+ ++YVGN+ Y T E+L + F CG + R+ + +K+ P GF ++E
Sbjct: 92 EDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIE 147
>gi|422302285|ref|ZP_16389648.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
gi|389788536|emb|CCI15746.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
Length = 106
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L E+F G +KR+ + +DK GF F+E
Sbjct: 2 SIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPIDKATSRKRGFAFVE 48
>gi|198438310|ref|XP_002131910.1| PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)-binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) [Ciona intestinalis]
Length = 225
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ + +++VGN+ Y T E+L + F G I R+ + D+Y P GF ++E
Sbjct: 93 EEKVEADSRSVFVGNVDYGATAEELEQHFHGTGSINRVTILCDRYSGHPKGFAYVE 148
>gi|254410328|ref|ZP_05024107.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182534|gb|EDX77519.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T E L +F+ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTAEDLSAVFADYGAVKRVQLPTDRETGRPRGFGFVE 48
>gi|428671247|gb|EKX72165.1| conserved hypothetical protein [Babesia equi]
Length = 146
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T ++L E F G I RI + +DK+ P G+ ++E
Sbjct: 39 SVYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKWTGHPKGYAYIE 85
>gi|395856895|ref|XP_003800852.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Otolemur
garnettii]
Length = 274
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y T E+L F+ CG+I R+ + DK+ P G+ ++E
Sbjct: 135 EEKMEADHRSIYVGNVDYGGTAEELEAHFNCCGEIHRVTILCDKFSGHPKGYAYIE 190
>gi|223999511|ref|XP_002289428.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974636|gb|EED92965.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 81
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+S+ TE +L F G +K++ + LDK + P GF F++
Sbjct: 1 SIYVGNISFDATESELRSAFESHGAVKKLTLPLDKNTQRPRGFAFVQ 47
>gi|425459046|ref|ZP_18838532.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9808]
gi|440754722|ref|ZP_20933924.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389823286|emb|CCI28617.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9808]
gi|440174928|gb|ELP54297.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L E+F G +KR+ + +DK + GF F+E
Sbjct: 2 SIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKETQRKRGFAFVE 48
>gi|226291492|gb|EEH46920.1| hypothetical protein PADG_03018 [Paracoccidioides brasiliensis
Pb18]
Length = 264
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 120 EMQASLDQQSESLREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 177
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 178 FTGHPKGYAYVE 189
>gi|126304970|ref|XP_001376941.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Monodelphis domestica]
Length = 322
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EK+ ++YVGN+ Y T ++L FS CG+I R+ + DKY P G+ ++E
Sbjct: 163 EKVESDQRSVYVGNVDYSGTAKELESHFSCCGEINRVTILCDKYSGHPKGYAYIE 217
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
Length = 98
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL + +E + E+F + G+IKR+ + +D+ K GF F+E
Sbjct: 2 SIYVGNLPFEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVE 48
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LYVGNLSY TEE + ++F G + + M D+ P GF F+E
Sbjct: 3 LYVGNLSYDATEEDVRQIFEGVGPVSSVNMITDRDTGRPKGFAFVE 48
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 13 SYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
++RD+ S+ R+ +++VGN+SY EEQL ++FS+ G + + + D+
Sbjct: 2 AFRDREGAASKTSTSSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETG 61
Query: 73 TPCGFCFLE 81
P G+ F E
Sbjct: 62 KPKGYGFCE 70
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 74 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 120
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
S LYVGNLS+ T+E L FS CG + + + D+ P GF F+
Sbjct: 3 SKLYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFV 49
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E+L ++YVGN+ Y T E+L F+ CG++ R+ + DK+ P G+ ++E
Sbjct: 139 EQLESDHRSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKGYAYIE 193
>gi|400601143|gb|EJP68786.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 194
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 72 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVE 118
>gi|328952775|ref|YP_004370109.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
gi|328453099|gb|AEB08928.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
Length = 97
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LYVGNLS+ TEEQL LFS+ G + + D+ P GF F+E
Sbjct: 5 LYVGNLSFEMTEEQLGTLFSEAGPVTSAKIITDRQTGQPRGFGFVE 50
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 74 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 120
>gi|428173619|gb|EKX42520.1| hypothetical protein GUITHDRAFT_88058 [Guillardia theta CCMP2712]
Length = 213
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 31 RTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
R + ++++GN+ + + E++ LF+ CG+I I + +DK+ GF +LE
Sbjct: 88 RDSRSIFIGNVDFAASVEEVQALFADCGEINAITIPVDKFTGRAKGFAYLE 138
>gi|50420005|ref|XP_458535.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
gi|49654202|emb|CAG86667.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
Length = 218
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
EL S +E+E+ + ++Y+GN+ Y +T +L + FS G + R+ + L+K
Sbjct: 65 ELHSQLSNDSNNDPSEEERRDIDSRSVYIGNVDYGSTPLELQQHFSSGGVVNRVTIPLNK 124
Query: 70 YKKTPCGFCFLE 81
+ P GF +LE
Sbjct: 125 FTGQPKGFAYLE 136
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E++ ++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 164 EERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 219
>gi|1666299|emb|CAA63557.1| RNA-binding protein [Anabaena variabilis]
Length = 102
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TE L +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTENDLKGVFAEYGTVKRVQVPQDRETGRPRGFAFVE 48
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T E L ++F + G++ R+ + D+ P GF F++
Sbjct: 2 SIYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFVD 48
>gi|119490270|ref|ZP_01622783.1| RNA binding protein [Lyngbya sp. PCC 8106]
gi|119454156|gb|EAW35309.1| RNA binding protein [Lyngbya sp. PCC 8106]
Length = 105
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GNLSY +EE L +F++ G ++R+ + D+ P GF F+E
Sbjct: 2 SVYIGNLSYDVSEEDLKSVFAEYGTVRRVQIPTDRETGRPRGFAFVE 48
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN + TTEEQ+ + FS G + + + D+ P GF F+E
Sbjct: 6 SVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVE 52
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 90 SRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 138
>gi|428310915|ref|YP_007121892.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428252527|gb|AFZ18486.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 104
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T E L E+F + G + R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTAEDLGEIFKEYGTVGRVQLPTDRETGRPRGFAFVE 48
>gi|443647612|ref|ZP_21129748.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026368|emb|CAO88919.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335466|gb|ELS49937.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 97
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L E+F G +KR+ + +DK + GF F+E
Sbjct: 2 SIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKDTQRKRGFAFVE 48
>gi|126660986|ref|ZP_01732073.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126617726|gb|EAZ88508.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 81
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL+Y T+ L +FS G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRVHIPTDRETGRPRGFAFVE 48
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + +E + + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 57 EMQASLDQQSRELSENKEDI--DSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDK 114
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 115 FTGQPKGYAYVE 126
>gi|403223382|dbj|BAM41513.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 150
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T ++L E F G I RI + +DK+ P G+ ++E
Sbjct: 43 SIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKWTGHPKGYAYVE 89
>gi|390439660|ref|ZP_10228043.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389836940|emb|CCI32167.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL + +E + E+F++ G IKR+ + +D+ K GF F+E
Sbjct: 2 SIYVGNLPFEVNQEDVVEVFTEYGKIKRVHLPIDRETKKKRGFAFVE 48
>gi|159026366|emb|CAO88917.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 97
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L E+F G +KR+ + +DK + GF F+E
Sbjct: 2 SIFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKDTQRKRGFAFVE 48
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + +E + + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 57 EMQASLDQQSRELSENKEDI--DSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDK 114
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 115 FTGQPKGYAYVE 126
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 99 SRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 147
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 99 SRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 147
>gi|387782183|ref|YP_005792896.1| RNA binding protein [Helicobacter pylori 51]
gi|261837942|gb|ACX97708.1| RNA binding protein [Helicobacter pylori 51]
Length = 82
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVLNVKLIYDRETKKPKGFGFVE 49
>gi|452825397|gb|EME32394.1| RNA-binding protein [Galdieria sulphuraria]
Length = 152
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++VGNL + +EE++Y++FS CG++K + M D+ GF F+
Sbjct: 12 VFVGNLPFDCSEEEVYDVFSSCGNVKEVRMPFDREANRLKGFAFV 56
>gi|298490385|ref|YP_003720562.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298232303|gb|ADI63439.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 99
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE L +F+ G++KR+++ ++ GF F+E
Sbjct: 2 TIYVGNLSYRATEADLKAVFADYGEVKRVVLPTERETGRMRGFAFVE 48
>gi|440793313|gb|ELR14500.1| RNA recognition motif domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 139
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 30 LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L L+VGNL+ EE L E+F + G + R+ +G D+ P GF ++E
Sbjct: 72 LAQPKKLHVGNLTRNVNEEHLREIFGQWGKLLRVELGWDRRIDQPKGFAYVE 123
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN Y TTE+++ + FS G + + + LD+ P GF F+E
Sbjct: 7 SIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVE 53
>gi|386761306|ref|YP_006234941.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi PAGU611]
gi|385146322|dbj|BAM11830.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi PAGU611]
gi|396078441|dbj|BAM31817.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi ATCC
BAA-847]
Length = 81
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TLYVGNL Y T+++L ELFS+ G++ + + D+ P GF F+E
Sbjct: 3 TLYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRPKGFGFVE 49
>gi|449301196|gb|EMC97207.1| hypothetical protein BAUCODRAFT_68306 [Baudoinia compniacensis UAMH
10762]
Length = 223
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + D +G R +E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 51 EMQASIDAQTEGLRESKEDI--DGRSVFVGNVDYGASPEEIQAHFQTCGSINRVTILLDK 108
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 109 FTGHPKGYAYVE 120
>gi|443713406|gb|ELU06276.1| hypothetical protein CAPTEDRAFT_174932 [Capitella teleta]
Length = 184
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++KL +++VGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 103 EDKLDADNRSIWVGNVDYTATAEELEAHFHGCGCVNRVTILCDKFSGHPKGFAYVE 158
>gi|308804285|ref|XP_003079455.1| RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 (ISS)
[Ostreococcus tauri]
gi|116057910|emb|CAL54113.1| RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 (ISS)
[Ostreococcus tauri]
Length = 100
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 17 QHFKGS-RAEQEKL-LRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
H G RA +E+ + ++ + NLSY EE L E FS+ G+I + + LD+ + P
Sbjct: 33 HHRDGDDRARRERPDVNDLVSVKIDNLSYDAREEDLREAFSRYGEIGDVYVPLDRETRRP 92
Query: 75 CGFCFLE 81
GFCF +
Sbjct: 93 RGFCFRD 99
>gi|219120225|ref|XP_002180856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407572|gb|EEC47508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 97
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVG + Y TT E+L F CG ++R+ + DK+ P GF +LE
Sbjct: 4 SIYVGQVDYSTTPEELLAHFEACGTVERVTIVCDKFTGKPKGFAYLE 50
>gi|428224332|ref|YP_007108429.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
gi|427984233|gb|AFY65377.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
Length = 90
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TEE + +F++ G ++R+++ D+ GF F++
Sbjct: 2 TIYVGNLSYQATEEDVRSVFAEYGTVERVVLPTDRETGRMRGFAFVD 48
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L+V NL Y +TEE+L +LFSK G + + +D K P GF F+
Sbjct: 393 EEEEDLADSGRLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFAFI 448
>gi|384897532|ref|YP_005772960.1| Nucleotide binding protein [Helicobacter pylori Lithuania75]
gi|317012637|gb|ADU83245.1| Nucleotide binding protein [Helicobacter pylori Lithuania75]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFIE 49
>gi|261824468|pdb|2KI2|A Chain A, Solution Structure Of Ss-Dna Binding Protein 12rnp2
Precursor, Hp0827(O25501_helpy) Form Helicobacter
Pylori
Length = 90
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|15645446|ref|NP_207620.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori
26695]
gi|410024053|ref|YP_006893306.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori
Rif1]
gi|410501820|ref|YP_006936347.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori
Rif2]
gi|410682339|ref|YP_006934741.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori
26695]
gi|419417638|ref|ZP_13958055.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori P79]
gi|2313961|gb|AAD07877.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori
26695]
gi|384372572|gb|EIE28156.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori P79]
gi|409893980|gb|AFV42038.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori
26695]
gi|409895710|gb|AFV43632.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori
Rif1]
gi|409897371|gb|AFV45225.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori
Rif2]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 82 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 128
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GNLSY TEE L F++ G + R+ + D+ P GF F+E
Sbjct: 2 SIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVE 48
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 85 SRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 133
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 85 SRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 133
>gi|294882258|ref|XP_002769662.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873262|gb|EER02380.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 214
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
QE + R+ S +++GNL + T+E L ++FS CGDI+R+ + D GF FL+
Sbjct: 89 QESVERSKS-VFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLD 143
>gi|210135027|ref|YP_002301466.1| RNA-binding protein [Helicobacter pylori P12]
gi|386746017|ref|YP_006219234.1| RNA-binding protein [Helicobacter pylori HUP-B14]
gi|210132995|gb|ACJ07986.1| RNA-binding protein [Helicobacter pylori P12]
gi|384552266|gb|AFI07214.1| RNA-binding protein [Helicobacter pylori HUP-B14]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|388582273|gb|EIM22578.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 202
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 19 FKGSRAEQEKLLRTTS------TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK 72
F+G AE +++ +S ++YVGN+ Y T E L + F+ CG I R+ + DK+
Sbjct: 73 FEGQDAE---MMQESSEDVDGRSVYVGNVDYSATPEDLQKHFAACGTINRVTILCDKFTG 129
Query: 73 TPCGFCFLE 81
P G+ ++E
Sbjct: 130 HPKGYAYIE 138
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 82 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 128
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
LYV LS+ TTE L + F K GD+ + + +D+ K P GF FL
Sbjct: 67 LYVSGLSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGFAFL 111
>gi|420396656|ref|ZP_14895875.1| RNA binding protein [Helicobacter pylori CPY1313]
gi|393013514|gb|EJB14690.1| RNA binding protein [Helicobacter pylori CPY1313]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRKTKKPKGFGFVE 49
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of
Hypothetical Polyadenylate-Binding Protein (Pabpn1)
From Homo Sapiens At 1.95 A Resolution
Length = 89
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 8 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 54
>gi|301097894|ref|XP_002898041.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
gi|262106486|gb|EEY64538.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
Length = 225
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++Y+G + Y +T E+L LF CG I R+ + DK+ P G+ ++E
Sbjct: 104 TSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIE 151
>gi|171909603|ref|ZP_02925073.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+YVGNL + TE+ + LFS G+++ + M D+ P GF F+
Sbjct: 5 MYVGNLPWTATEDDVRSLFSAHGEVREVNMPTDRTSGRPRGFAFV 49
>gi|420455069|ref|ZP_14953899.1| RNA binding protein [Helicobacter pylori Hp A-14]
gi|393073419|gb|EJB74193.1| RNA binding protein [Helicobacter pylori Hp A-14]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 67 SRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 115
>gi|75906353|ref|YP_320649.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75700078|gb|ABA19754.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E + +F++ G +KR+++ D+ GF F+E
Sbjct: 2 SIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVE 48
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 15 RDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTP 74
R + F SR+E ++TL+VGNL++ T++ +YELF G++ + + D+ P
Sbjct: 359 RAKAFGDSRSE------PSATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQP 412
Query: 75 CGFCFLE 81
GF ++E
Sbjct: 413 KGFGYVE 419
>gi|420450495|ref|ZP_14949355.1| RNA binding protein [Helicobacter pylori Hp H-45]
gi|393067028|gb|EJB67842.1| RNA binding protein [Helicobacter pylori Hp H-45]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|17229803|ref|NP_486351.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|81859085|sp|Q9WX39.3|RBPF_NOSS1 RecName: Full=Putative RNA-binding protein RbpF
gi|4850345|dbj|BAA77713.1| RNA binding protein [Anabaena variabilis]
gi|17131403|dbj|BAB74010.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 105
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E + +F++ G +KR+++ D+ GF F+E
Sbjct: 2 SIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVE 48
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 81 SRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 129
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
S AE + + L+V NL Y TE+ L LFSK G + + M +DK K P GF F+
Sbjct: 595 SAAEGSVSIAESGRLFVRNLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTGFAFV 653
>gi|255725524|ref|XP_002547691.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
gi|240135582|gb|EER35136.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
Length = 137
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y +T EQL E F G I+R+ + D++ P G+ ++E
Sbjct: 30 SVYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRFSGLPKGYAYIE 76
>gi|350585423|ref|XP_003356120.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
Q+K+ ++YVGN+ Y T +L F+ CG+I R+ + DK+ P G+ ++E
Sbjct: 144 QQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIE 199
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
Q+K+ ++YVGN+ Y T +L F+ CG+I R+ + DK+ P G+ ++E
Sbjct: 144 QQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIE 199
>gi|255539947|ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 234
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
GS + EK + ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++
Sbjct: 108 GSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYV 166
Query: 81 E 81
E
Sbjct: 167 E 167
>gi|218245910|ref|YP_002371281.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058958|ref|YP_003136846.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166388|gb|ACK65125.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589124|gb|ACV00011.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 98
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL+Y TEE L ++F++ G +KR+ + +D+ + GF F+E
Sbjct: 2 SIYVGNLAYEITEEDLTQVFAEYGTVKRVHLPVDRETQKMRGFGFVE 48
>gi|406860694|gb|EKD13751.1| polyadenylate-binding protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 194
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y T E + F CG I R+ + LDK+ P G+ ++E
Sbjct: 66 SIFVGNVDYSATPEDIQAHFESCGSINRVTILLDKFTGHPKGYAYVE 112
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 74 SRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 122
>gi|268569440|ref|XP_002640523.1| Hypothetical protein CBG18685 [Caenorhabditis briggsae]
Length = 84
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN Y TTE+++ + F+ G++ + + LD+ P GF F+E
Sbjct: 7 SVYVGNAPYQTTEQEMGDFFATAGEVTNVRIVLDRETGRPRGFAFVE 53
>gi|15611833|ref|NP_223484.1| hypothetical protein jhp0766 [Helicobacter pylori J99]
gi|308182986|ref|YP_003927113.1| hypothetical protein HPPC_04185 [Helicobacter pylori PeCan4]
gi|384891210|ref|YP_005765343.1| Rna-binding protein [Helicobacter pylori 908]
gi|385219078|ref|YP_005780553.1| hypothetical protein HPGAM_04265 [Helicobacter pylori
Gambia94/24]
gi|385223882|ref|YP_005783808.1| RNA-binding protein [Helicobacter pylori 2017]
gi|385231731|ref|YP_005791650.1| Rna-binding protein [Helicobacter pylori 2018]
gi|420410367|ref|ZP_14909510.1| RNA binding protein [Helicobacter pylori NQ4200]
gi|420423822|ref|ZP_14922893.1| RNA binding protein [Helicobacter pylori Hp A-4]
gi|420425526|ref|ZP_14924586.1| RNA binding protein [Helicobacter pylori Hp A-5]
gi|420428841|ref|ZP_14927876.1| RNA binding protein [Helicobacter pylori Hp A-17]
gi|420432321|ref|ZP_14931336.1| RNA binding protein [Helicobacter pylori Hp H-16]
gi|420434102|ref|ZP_14933107.1| RNA binding protein [Helicobacter pylori Hp H-24]
gi|420438854|ref|ZP_14937828.1| RNA binding protein [Helicobacter pylori Hp H-29]
gi|420442404|ref|ZP_14941343.1| RNA binding protein [Helicobacter pylori Hp H-36]
gi|420443837|ref|ZP_14942764.1| RNA binding protein [Helicobacter pylori Hp H-41]
gi|420445549|ref|ZP_14944460.1| RNA binding protein [Helicobacter pylori Hp H-42]
gi|420448979|ref|ZP_14947854.1| RNA binding protein [Helicobacter pylori Hp H-44]
gi|420452152|ref|ZP_14951001.1| RNA binding protein [Helicobacter pylori Hp A-6]
gi|420453662|ref|ZP_14952498.1| RNA binding protein [Helicobacter pylori Hp A-8]
gi|420457177|ref|ZP_14955995.1| RNA binding protein [Helicobacter pylori Hp A-16]
gi|420458675|ref|ZP_14957485.1| RNA binding protein [Helicobacter pylori Hp A-26]
gi|420462274|ref|ZP_14961058.1| RNA binding protein [Helicobacter pylori Hp H-3]
gi|420463694|ref|ZP_14962470.1| RNA binding protein [Helicobacter pylori Hp H-4]
gi|420465558|ref|ZP_14964324.1| RNA binding protein [Helicobacter pylori Hp H-6]
gi|420469006|ref|ZP_14967733.1| RNA binding protein [Helicobacter pylori Hp H-10]
gi|420472436|ref|ZP_14971127.1| RNA binding protein [Helicobacter pylori Hp H-18]
gi|420475805|ref|ZP_14974474.1| RNA binding protein [Helicobacter pylori Hp H-21]
gi|420477256|ref|ZP_14975915.1| RNA binding protein [Helicobacter pylori Hp H-23]
gi|420479395|ref|ZP_14978044.1| RNA binding protein [Helicobacter pylori Hp H-34]
gi|420480866|ref|ZP_14979508.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-1]
gi|420482402|ref|ZP_14981039.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-2]
gi|420486027|ref|ZP_14984642.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-4]
gi|420487540|ref|ZP_14986144.1| RNA binding protein [Helicobacter pylori Hp P-8]
gi|420489317|ref|ZP_14987912.1| RNA binding protein [Helicobacter pylori Hp P-11]
gi|420497833|ref|ZP_14996393.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-25]
gi|420502707|ref|ZP_15001244.1| RNA binding protein [Helicobacter pylori Hp P-41]
gi|420504481|ref|ZP_15003007.1| RNA binding protein [Helicobacter pylori Hp P-62]
gi|420507868|ref|ZP_15006377.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp H-24b]
gi|420509736|ref|ZP_15008234.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp H-24c]
gi|420511362|ref|ZP_15009849.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-1b]
gi|420512823|ref|ZP_15011306.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-2b]
gi|420516503|ref|ZP_15014964.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-4c]
gi|420518386|ref|ZP_15016837.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-4d]
gi|420519803|ref|ZP_15018243.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp H-5b]
gi|420521322|ref|ZP_15019753.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-8b]
gi|420523073|ref|ZP_15021494.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-11b]
gi|420528196|ref|ZP_15026588.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-25c]
gi|420530064|ref|ZP_15028449.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-25d]
gi|420531405|ref|ZP_15029778.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-28b]
gi|420533286|ref|ZP_15031647.1| RNA binding protein [Helicobacter pylori Hp M1]
gi|420536571|ref|ZP_15034913.1| RNA binding protein [Helicobacter pylori Hp M3]
gi|420538365|ref|ZP_15036692.1| RNA binding protein [Helicobacter pylori Hp M4]
gi|420540101|ref|ZP_15038418.1| RNA binding protein [Helicobacter pylori Hp M5]
gi|420541765|ref|ZP_15040073.1| RNA binding protein [Helicobacter pylori Hp M6]
gi|420543282|ref|ZP_15041574.1| RNA binding protein [Helicobacter pylori Hp M9]
gi|421711941|ref|ZP_16151282.1| RNA recognition motif family protein [Helicobacter pylori R030b]
gi|421721787|ref|ZP_16161061.1| RNA recognition motif family protein [Helicobacter pylori R055a]
gi|425432301|ref|ZP_18812867.1| hypothetical protein HMPREF1391_00444 [Helicobacter pylori
GAM100Ai]
gi|4155331|gb|AAD06345.1| putative [Helicobacter pylori J99]
gi|307637519|gb|ADN79969.1| Rna-binding protein [Helicobacter pylori 908]
gi|308065171|gb|ADO07063.1| hypothetical protein HPPC_04185 [Helicobacter pylori PeCan4]
gi|317014236|gb|ADU81672.1| hypothetical protein HPGAM_04265 [Helicobacter pylori
Gambia94/24]
gi|325996108|gb|ADZ51513.1| Rna-binding protein [Helicobacter pylori 2018]
gi|325997704|gb|ADZ49912.1| RNA-binding protein [Helicobacter pylori 2017]
gi|393028680|gb|EJB29766.1| RNA binding protein [Helicobacter pylori NQ4200]
gi|393040424|gb|EJB41442.1| RNA binding protein [Helicobacter pylori Hp A-5]
gi|393041544|gb|EJB42560.1| RNA binding protein [Helicobacter pylori Hp A-4]
gi|393046500|gb|EJB47480.1| RNA binding protein [Helicobacter pylori Hp A-17]
gi|393047480|gb|EJB48454.1| RNA binding protein [Helicobacter pylori Hp H-16]
gi|393050517|gb|EJB51477.1| RNA binding protein [Helicobacter pylori Hp H-24]
gi|393056454|gb|EJB57366.1| RNA binding protein [Helicobacter pylori Hp H-29]
gi|393058341|gb|EJB59233.1| RNA binding protein [Helicobacter pylori Hp H-36]
gi|393060037|gb|EJB60911.1| RNA binding protein [Helicobacter pylori Hp H-41]
gi|393062107|gb|EJB62966.1| RNA binding protein [Helicobacter pylori Hp H-42]
gi|393064408|gb|EJB65246.1| RNA binding protein [Helicobacter pylori Hp H-44]
gi|393068870|gb|EJB69669.1| RNA binding protein [Helicobacter pylori Hp A-6]
gi|393069411|gb|EJB70208.1| RNA binding protein [Helicobacter pylori Hp A-8]
gi|393074003|gb|EJB74768.1| RNA binding protein [Helicobacter pylori Hp A-16]
gi|393076196|gb|EJB76950.1| RNA binding protein [Helicobacter pylori Hp A-26]
gi|393078920|gb|EJB79657.1| RNA binding protein [Helicobacter pylori Hp H-3]
gi|393079176|gb|EJB79909.1| RNA binding protein [Helicobacter pylori Hp H-4]
gi|393081189|gb|EJB81912.1| RNA binding protein [Helicobacter pylori Hp H-6]
gi|393085655|gb|EJB86336.1| RNA binding protein [Helicobacter pylori Hp H-10]
gi|393088924|gb|EJB89568.1| RNA binding protein [Helicobacter pylori Hp H-18]
gi|393091671|gb|EJB92298.1| RNA binding protein [Helicobacter pylori Hp H-21]
gi|393093906|gb|EJB94521.1| RNA binding protein [Helicobacter pylori Hp H-23]
gi|393095637|gb|EJB96241.1| RNA binding protein [Helicobacter pylori Hp H-34]
gi|393095987|gb|EJB96586.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-1]
gi|393099636|gb|EJC00218.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-2]
gi|393100629|gb|EJC01203.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-4]
gi|393102117|gb|EJC02683.1| RNA binding protein [Helicobacter pylori Hp P-8]
gi|393106157|gb|EJC06702.1| RNA binding protein [Helicobacter pylori Hp P-11]
gi|393114112|gb|EJC14630.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-25]
gi|393117721|gb|EJC18222.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp H-24b]
gi|393117971|gb|EJC18469.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp H-24c]
gi|393119846|gb|EJC20336.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-1b]
gi|393121849|gb|EJC22327.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-4d]
gi|393122567|gb|EJC23040.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-4c]
gi|393125682|gb|EJC26135.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp H-5b]
gi|393127909|gb|EJC28354.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-8b]
gi|393129071|gb|EJC29510.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-11b]
gi|393134091|gb|EJC34506.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-25c]
gi|393136393|gb|EJC36784.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-25d]
gi|393137077|gb|EJC37464.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-28b]
gi|393137747|gb|EJC38130.1| RNA binding protein [Helicobacter pylori Hp M1]
gi|393143079|gb|EJC43424.1| RNA binding protein [Helicobacter pylori Hp M4]
gi|393144219|gb|EJC44563.1| RNA binding protein [Helicobacter pylori Hp M3]
gi|393146318|gb|EJC46647.1| RNA binding protein [Helicobacter pylori Hp M5]
gi|393148385|gb|EJC48709.1| RNA binding protein [Helicobacter pylori Hp M6]
gi|393151929|gb|EJC52231.1| RNA binding protein [Helicobacter pylori Hp P-41]
gi|393154327|gb|EJC54610.1| RNA binding protein [Helicobacter pylori Hp P-62]
gi|393157886|gb|EJC58147.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-2b]
gi|393159337|gb|EJC59590.1| RNA binding protein [Helicobacter pylori Hp M9]
gi|407211433|gb|EKE81301.1| RNA recognition motif family protein [Helicobacter pylori R030b]
gi|407224248|gb|EKE94025.1| RNA recognition motif family protein [Helicobacter pylori R055a]
gi|410715134|gb|EKQ72565.1| hypothetical protein HMPREF1391_00444 [Helicobacter pylori
GAM100Ai]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|385249345|ref|YP_005777564.1| RNA binding protein [Helicobacter pylori F57]
gi|317182140|dbj|BAJ59924.1| RNA binding protein [Helicobacter pylori F57]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|17228236|ref|NP_484784.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75910838|ref|YP_325134.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|81818536|sp|Q44560.3|RBPA_NOSS1 RecName: Full=Putative RNA-binding protein RbpA
gi|532033|dbj|BAA04563.1| RNA-binding protein [Anabaena variabilis]
gi|17130086|dbj|BAB72698.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75704563|gb|ABA24239.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 102
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T++ L +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVE 48
>gi|356550257|ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 31 RTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
R + L+V LS+YTT+EQL +LFS G + + + LD K P GF F+
Sbjct: 4 RIGTKLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFV 53
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + + +E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 49 EMQADLDQQSESLQENKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 106
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 107 FSGQPKGYAYVE 118
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T E+L F CG + R+ + DK+ P GF ++E
Sbjct: 7 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIE 53
>gi|402909310|ref|XP_003917365.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Papio anubis]
Length = 291
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + E+L FS CG++ R+ + DK+ P G+ ++E
Sbjct: 152 EEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIE 207
>gi|297284668|ref|XP_001100533.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Macaca
mulatta]
Length = 322
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + E+L FS CG++ R+ + DK+ P G+ ++E
Sbjct: 152 EEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIE 207
>gi|108563238|ref|YP_627554.1| RNA binding protein [Helicobacter pylori HPAG1]
gi|207092180|ref|ZP_03239967.1| RNA binding protein [Helicobacter pylori HPKX_438_AG0C1]
gi|207108722|ref|ZP_03242884.1| RNA binding protein [Helicobacter pylori HPKX_438_CA4C1]
gi|208434741|ref|YP_002266407.1| RNA binding protein [Helicobacter pylori G27]
gi|217034126|ref|ZP_03439546.1| hypothetical protein HP9810_868g19 [Helicobacter pylori 98-10]
gi|254779200|ref|YP_003057305.1| Nucleotide binding protein [Helicobacter pylori B38]
gi|308184614|ref|YP_003928747.1| Nucleotide binding protein [Helicobacter pylori SJM180]
gi|383749509|ref|YP_005424612.1| Nucleotide binding protein [Helicobacter pylori ELS37]
gi|384887524|ref|YP_005762035.1| RNA binding protein [Helicobacter pylori 52]
gi|384895891|ref|YP_005769880.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 35A]
gi|384898869|ref|YP_005774248.1| RNA binding protein [Helicobacter pylori F30]
gi|385217292|ref|YP_005778768.1| RNA binding protein [Helicobacter pylori F16]
gi|385220355|ref|YP_005781827.1| Nucleotide binding protein [Helicobacter pylori India7]
gi|385222267|ref|YP_005771400.1| Nucleotide binding protein [Helicobacter pylori SouthAfrica7]
gi|385225221|ref|YP_005785146.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 83]
gi|385227064|ref|YP_005786988.1| Nucleotide binding protein [Helicobacter pylori SNT49]
gi|419417835|ref|ZP_13958228.1| Nucleotide binding protein [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|420395503|ref|ZP_14894730.1| RNA binding protein [Helicobacter pylori CPY1124]
gi|420399055|ref|ZP_14898266.1| RNA binding protein [Helicobacter pylori CPY1962]
gi|420400434|ref|ZP_14899635.1| RNA binding protein [Helicobacter pylori CPY3281]
gi|420401957|ref|ZP_14901148.1| RNA binding protein [Helicobacter pylori CPY6081]
gi|420404863|ref|ZP_14904043.1| RNA binding protein [Helicobacter pylori CPY6271]
gi|420407014|ref|ZP_14906184.1| RNA binding protein [Helicobacter pylori CPY6311]
gi|420412407|ref|ZP_14911536.1| RNA binding protein [Helicobacter pylori NQ4228]
gi|420413838|ref|ZP_14912960.1| RNA binding protein [Helicobacter pylori NQ4099]
gi|420415205|ref|ZP_14914320.1| RNA binding protein [Helicobacter pylori NQ4053]
gi|420417163|ref|ZP_14916268.1| RNA binding protein [Helicobacter pylori NQ4044]
gi|420418773|ref|ZP_14917865.1| RNA binding protein [Helicobacter pylori NQ4076]
gi|420420101|ref|ZP_14919188.1| RNA binding protein [Helicobacter pylori NQ4161]
gi|420422177|ref|ZP_14921255.1| RNA binding protein [Helicobacter pylori NQ4110]
gi|420426823|ref|ZP_14925872.1| RNA binding protein [Helicobacter pylori Hp A-9]
gi|420430627|ref|ZP_14929655.1| RNA binding protein [Helicobacter pylori Hp A-20]
gi|420436121|ref|ZP_14935117.1| RNA binding protein [Helicobacter pylori Hp H-27]
gi|420437247|ref|ZP_14936231.1| RNA binding protein [Helicobacter pylori Hp H-28]
gi|420447180|ref|ZP_14946074.1| RNA binding protein [Helicobacter pylori Hp H-43]
gi|420460332|ref|ZP_14959131.1| RNA binding protein [Helicobacter pylori Hp A-27]
gi|420470696|ref|ZP_14969405.1| RNA binding protein [Helicobacter pylori Hp H-11]
gi|420492854|ref|ZP_14991428.1| RNA binding protein [Helicobacter pylori Hp P-15]
gi|420494347|ref|ZP_14992916.1| RNA binding protein [Helicobacter pylori Hp P-16]
gi|420496128|ref|ZP_14994692.1| RNA binding protein [Helicobacter pylori Hp P-23]
gi|420501620|ref|ZP_15000164.1| RNA binding protein [Helicobacter pylori Hp P-30]
gi|420506658|ref|ZP_15005173.1| RNA binding protein [Helicobacter pylori Hp P-74]
gi|420526874|ref|ZP_15025275.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-15b]
gi|421710341|ref|ZP_16149698.1| RNA recognition motif family protein [Helicobacter pylori R018c]
gi|421713144|ref|ZP_16152475.1| RNA recognition motif family protein [Helicobacter pylori R32b]
gi|421715106|ref|ZP_16154424.1| RNA recognition motif family protein [Helicobacter pylori R036d]
gi|421716926|ref|ZP_16156234.1| RNA recognition motif family protein [Helicobacter pylori R037c]
gi|421718446|ref|ZP_16157745.1| RNA recognition motif family protein [Helicobacter pylori R038b]
gi|421719578|ref|ZP_16158862.1| RNA recognition motif family protein [Helicobacter pylori R046Wa]
gi|421723617|ref|ZP_16162871.1| RNA recognition motif family protein [Helicobacter pylori R056a]
gi|444373958|ref|ZP_21173265.1| Nucleotide binding protein [Helicobacter pylori A45]
gi|107837011|gb|ABF84880.1| RNA binding protein [Helicobacter pylori HPAG1]
gi|208432670|gb|ACI27541.1| RNA binding protein [Helicobacter pylori G27]
gi|216943410|gb|EEC22866.1| hypothetical protein HP9810_868g19 [Helicobacter pylori 98-10]
gi|254001111|emb|CAX29066.1| Nucleotide binding protein [Helicobacter pylori B38]
gi|261839354|gb|ACX99119.1| RNA binding protein [Helicobacter pylori 52]
gi|308060534|gb|ADO02430.1| Nucleotide binding protein [Helicobacter pylori SJM180]
gi|315586507|gb|ADU40888.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 35A]
gi|317009162|gb|ADU79742.1| Nucleotide binding protein [Helicobacter pylori India7]
gi|317011046|gb|ADU84793.1| Nucleotide binding protein [Helicobacter pylori SouthAfrica7]
gi|317177341|dbj|BAJ55130.1| RNA binding protein [Helicobacter pylori F16]
gi|317178812|dbj|BAJ56600.1| RNA binding protein [Helicobacter pylori F30]
gi|332673367|gb|AEE70184.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 83]
gi|344331977|gb|AEN17007.1| Nucleotide binding protein [Helicobacter pylori SNT49]
gi|380874255|gb|AFF20036.1| Nucleotide binding protein [Helicobacter pylori ELS37]
gi|384375356|gb|EIE30653.1| Nucleotide binding protein [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|393013284|gb|EJB14461.1| RNA binding protein [Helicobacter pylori CPY1962]
gi|393013939|gb|EJB15113.1| RNA binding protein [Helicobacter pylori CPY1124]
gi|393017379|gb|EJB18532.1| RNA binding protein [Helicobacter pylori CPY3281]
gi|393017776|gb|EJB18928.1| RNA binding protein [Helicobacter pylori CPY6081]
gi|393023851|gb|EJB24965.1| RNA binding protein [Helicobacter pylori CPY6311]
gi|393024733|gb|EJB25843.1| RNA binding protein [Helicobacter pylori CPY6271]
gi|393027399|gb|EJB28488.1| RNA binding protein [Helicobacter pylori NQ4099]
gi|393028065|gb|EJB29153.1| RNA binding protein [Helicobacter pylori NQ4228]
gi|393032673|gb|EJB33738.1| RNA binding protein [Helicobacter pylori NQ4053]
gi|393033599|gb|EJB34662.1| RNA binding protein [Helicobacter pylori NQ4076]
gi|393034994|gb|EJB36044.1| RNA binding protein [Helicobacter pylori NQ4044]
gi|393037337|gb|EJB38373.1| RNA binding protein [Helicobacter pylori NQ4161]
gi|393038695|gb|EJB39729.1| RNA binding protein [Helicobacter pylori NQ4110]
gi|393043780|gb|EJB44783.1| RNA binding protein [Helicobacter pylori Hp A-9]
gi|393047324|gb|EJB48299.1| RNA binding protein [Helicobacter pylori Hp A-20]
gi|393050006|gb|EJB50967.1| RNA binding protein [Helicobacter pylori Hp H-27]
gi|393053561|gb|EJB54505.1| RNA binding protein [Helicobacter pylori Hp H-28]
gi|393064153|gb|EJB64993.1| RNA binding protein [Helicobacter pylori Hp H-43]
gi|393077434|gb|EJB78183.1| RNA binding protein [Helicobacter pylori Hp A-27]
gi|393086129|gb|EJB86808.1| RNA binding protein [Helicobacter pylori Hp H-11]
gi|393107293|gb|EJC07836.1| RNA binding protein [Helicobacter pylori Hp P-15]
gi|393111148|gb|EJC11672.1| RNA binding protein [Helicobacter pylori Hp P-16]
gi|393112439|gb|EJC12960.1| RNA binding protein [Helicobacter pylori Hp P-23]
gi|393116163|gb|EJC16673.1| RNA binding protein [Helicobacter pylori Hp P-74]
gi|393132179|gb|EJC32602.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-15b]
gi|393150426|gb|EJC50734.1| RNA binding protein [Helicobacter pylori Hp P-30]
gi|407210532|gb|EKE80411.1| RNA recognition motif family protein [Helicobacter pylori R018c]
gi|407215960|gb|EKE85798.1| RNA recognition motif family protein [Helicobacter pylori R036d]
gi|407216510|gb|EKE86347.1| RNA recognition motif family protein [Helicobacter pylori R32b]
gi|407219501|gb|EKE89316.1| RNA recognition motif family protein [Helicobacter pylori R037c]
gi|407220901|gb|EKE90706.1| RNA recognition motif family protein [Helicobacter pylori R046Wa]
gi|407221712|gb|EKE91516.1| RNA recognition motif family protein [Helicobacter pylori R038b]
gi|407224640|gb|EKE94416.1| RNA recognition motif family protein [Helicobacter pylori R056a]
gi|443621182|gb|ELT81621.1| Nucleotide binding protein [Helicobacter pylori A45]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|430811633|emb|CCJ30944.1| unnamed protein product [Pneumocystis jirovecii]
Length = 176
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ ++YVGN+ Y T E++ F CG I R+ + D+Y P GF ++E
Sbjct: 62 SRSVYVGNVDYGATPEEIQAHFQTCGTINRVTILCDRYSGHPKGFAYIE 110
>gi|409080136|gb|EKM80497.1| hypothetical protein AGABI1DRAFT_100088 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 343
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E++K L + ++YVGN+ Y T E++ F CG I R+ + DK+ P G+ ++E
Sbjct: 72 EEDKNLIDSRSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVE 128
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
K +R +K TL++G+LS+ TE+Q+YE F + GD++ + + D+ P GF +
Sbjct: 282 KRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGY 341
Query: 80 LE 81
++
Sbjct: 342 VQ 343
>gi|325970873|ref|YP_004247064.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324026111|gb|ADY12870.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 90
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGN+SY T+EE+L +LF++ G + + +D+ + P GF F+E
Sbjct: 5 IYVGNMSYNTSEEELRDLFAQYGTVLSANIIIDRETRRPKGFGFVE 50
>gi|255539953|ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 231
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
GS + EK + ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++
Sbjct: 92 GSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYV 150
Query: 81 E 81
E
Sbjct: 151 E 151
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + + +E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 49 EMQADLDQQTESLQENKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 106
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 107 FSGQPKGYAYVE 118
>gi|365153971|ref|ZP_09350405.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
gi|158605004|gb|EAT99377.3| 31 kDa ribonucleoprotein, (RNA-binding proteinRNP-T) (RNA-binding
protein 1/2/3) (AtRBP33) (RNA-binding proteincp31)
[Campylobacter concisus 13826]
gi|363650683|gb|EHL89770.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
Length = 81
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNLSY TTE +L E F++ G+++R + D+ GF F+E
Sbjct: 2 NIYVGNLSYRTTEAELKEAFAQFGEVRRAKIVKDRETDRSKGFGFVE 48
>gi|427727788|ref|YP_007074025.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427363707|gb|AFY46428.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 101
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++Y+GNLSY TEE L F++ G + R+ + D+ P GF F+
Sbjct: 2 SIYIGNLSYQVTEEDLKRAFAEYGKVNRVQLPTDRETGRPRGFAFV 47
>gi|434405771|ref|YP_007148656.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
gi|428260026|gb|AFZ25976.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
Length = 103
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L F + G + R+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYQVTEEDLKLAFKEYGTVNRVQLPTDRETGRPRGFAFVE 48
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L+V NL Y +TEE L +LFSK G + + +D K P GF F+
Sbjct: 367 EEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFV 422
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK---TPCGFCFLE 81
T+++ NL++ TTEE L E+FSK G +K + K K GF F+E
Sbjct: 705 TVFIKNLNFSTTEETLKEVFSKVGMVKSCSISRKKSKTGELLSMGFGFVE 754
>gi|406603845|emb|CCH44661.1| hypothetical protein BN7_4230 [Wickerhamomyces ciferrii]
Length = 180
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S ++EK ++YVGN+ Y ++ E+L + F G I R+ + L+K+ P GF ++E
Sbjct: 58 SETQEEKSDIDARSIYVGNVDYDSSPEELQKHFQSVGVINRVTILLNKFTGQPKGFAYIE 117
>gi|386749770|ref|YP_006222977.1| RNA-binding protein [Helicobacter cetorum MIT 00-7128]
gi|384556013|gb|AFI04347.1| RNA-binding protein [Helicobacter cetorum MIT 00-7128]
Length = 82
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T E++ ELFSK G++ + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATNEEVKELFSKFGEVFSVKLICDRETKRPKGFGFVE 49
>gi|302697041|ref|XP_003038199.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune
H4-8]
gi|300111896|gb|EFJ03297.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune
H4-8]
Length = 344
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E++K ++YVGN+ Y T E + F CG I R+ + DK+ P G+ ++E
Sbjct: 41 EEDKTAADNRSIYVGNVDYSATPEDIQAHFQACGTINRVTILCDKFTGHPKGYAYVE 97
>gi|386394181|ref|ZP_10078962.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
gi|385735059|gb|EIG55257.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
Length = 92
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +YVGNL + TTE+ + +LF++ GD++ + + D+ P GF F+E
Sbjct: 2 SKNIYVGNLPFRTTEDSVRDLFARYGDVQSVKLISDRETGKPRGFGFVE 50
>gi|145492248|ref|XP_001432122.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399231|emb|CAK64725.1| unnamed protein product [Paramecium tetraurelia]
Length = 559
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
+VE + RDQ + + Q+ ++T ++GN+S+Y TE+ LY +F CG IK + +
Sbjct: 381 TVEKTKPRDQ--RPQQGGQQGGSGESTTCFIGNMSFYATEDSLYPVFEDCGKIKEVRIAK 438
Query: 68 DKYKKTPCGFCFLE 81
D K+ GF ++E
Sbjct: 439 DAEGKSR-GFGYVE 451
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
K +R +K TL++G+LS+ TE+Q+YE F + GD++ + + D+ P GF +
Sbjct: 279 KRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGY 338
Query: 80 LE 81
++
Sbjct: 339 VQ 340
>gi|381207415|ref|ZP_09914486.1| RNA-binding region RNP-1 (RNA recognition motif) [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 117
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL+Y TEEQL + F + G++ ++ + +D+ GF F+E
Sbjct: 28 NIYVGNLAYSVTEEQLRDAFGQFGEVDKVSIIMDRMTGRSKGFGFVE 74
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GNLSY TEE L F++ G + R+ + D+ P GF F+E
Sbjct: 2 SIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVE 48
>gi|17230420|ref|NP_486968.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75907197|ref|YP_321493.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|81818505|sp|Q44554.3|RBPB_NOSS1 RecName: Full=Putative RNA-binding protein RbpB
gi|304057|gb|AAA67898.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|801736|dbj|BAA09050.1| RNA-binding protein RbpB [Anabaena variabilis]
gi|17132022|dbj|BAB74627.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75700922|gb|ABA20598.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L +F++ G +KR+ + +D+ GF F+E
Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVE 48
>gi|398389564|ref|XP_003848243.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
gi|339468117|gb|EGP83219.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
Length = 199
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
EL + D R +E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 52 ELQANIDSQADNLRENKEDI--DARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 109
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 110 FTGHPKGYAYVE 121
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
AE++K + S +YVGN+ Y T + L FS CG I RI + DK+ P G+ ++E
Sbjct: 84 AEEKKEIDKRS-VYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIE 140
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EK+ + +++VGN+ Y E+L F CG I RI + D+Y P GF ++E
Sbjct: 57 EKVEADSRSVFVGNVDYGAAAEELEAHFHGCGAINRITILCDRYSGRPKGFAYIE 111
>gi|188527327|ref|YP_001910014.1| RNA binding protein [Helicobacter pylori Shi470]
gi|384889464|ref|YP_005763766.1| RNA binding protein [Helicobacter pylori v225d]
gi|384892850|ref|YP_005766943.1| RNA binding protein [Helicobacter pylori Cuz20]
gi|384894130|ref|YP_005768179.1| RNA binding protein [Helicobacter pylori Sat464]
gi|385228550|ref|YP_005788483.1| RNA binding protein [Helicobacter pylori Puno120]
gi|385230107|ref|YP_005790023.1| RNA binding protein [Helicobacter pylori Puno135]
gi|386751215|ref|YP_006224435.1| RNA binding protein [Helicobacter pylori Shi417]
gi|386754059|ref|YP_006227277.1| RNA binding protein [Helicobacter pylori Shi112]
gi|420403683|ref|ZP_14902869.1| RNA binding protein [Helicobacter pylori CPY6261]
gi|425789412|ref|YP_007017332.1| RNA binding protein [Helicobacter pylori Aklavik117]
gi|188143567|gb|ACD47984.1| RNA binding protein [Helicobacter pylori Shi470]
gi|297380030|gb|ADI34917.1| RNA binding protein [Helicobacter pylori v225d]
gi|308062147|gb|ADO04035.1| RNA binding protein [Helicobacter pylori Cuz20]
gi|308063384|gb|ADO05271.1| RNA binding protein [Helicobacter pylori Sat464]
gi|344334988|gb|AEN15432.1| RNA binding protein [Helicobacter pylori Puno120]
gi|344336545|gb|AEN18506.1| RNA binding protein [Helicobacter pylori Puno135]
gi|384557473|gb|AFH97941.1| RNA binding protein [Helicobacter pylori Shi417]
gi|384560317|gb|AFI00784.1| RNA binding protein [Helicobacter pylori Shi112]
gi|393020849|gb|EJB21988.1| RNA binding protein [Helicobacter pylori CPY6261]
gi|425627727|gb|AFX91195.1| RNA binding protein [Helicobacter pylori Aklavik117]
Length = 82
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|541310|pir||S41505 12RNP2 protein - Synechococcus sp. (PCC 6301)
gi|961511|dbj|BAA09863.1| 12kDa RNA-binding, 12RNP2 [Synechococcus elongatus PCC 7942]
Length = 100
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLS+ TEE + E+F++ G + R+ + D+ GF F+E
Sbjct: 2 TIYVGNLSFRATEEDVREVFAEYGPVSRVSLPDDRETGRLRGFAFIE 48
>gi|313143724|ref|ZP_07805917.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
gi|313128755|gb|EFR46372.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
Length = 91
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TLYVGNL Y T+++L ELFS+ G++ + + D+ P GF F+E
Sbjct: 13 TLYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRPKGFGFVE 59
>gi|284929630|ref|YP_003422152.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810074|gb|ADB95771.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 96
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L E+F+ G++KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYDVTKEDLNEVFTDYGEVKRVHIPTDRDTGRMRGFAFVE 48
>gi|172038249|ref|YP_001804750.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554398|ref|ZP_08973703.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171699703|gb|ACB52684.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353554077|gb|EHC23468.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 97
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L E+F+ G++KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYDVTKEDLSEVFTDYGEVKRVHIPTDRDTGRMRGFAFVE 48
>gi|420408967|ref|ZP_14908122.1| RNA binding protein [Helicobacter pylori NQ4216]
gi|393023129|gb|EJB24244.1| RNA binding protein [Helicobacter pylori NQ4216]
Length = 82
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S+AE+E++ ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++E
Sbjct: 84 SQAEKEEV--DARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVE 140
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 44 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 90
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++ + +D ++AE+E++ ++YVGN+ Y T E++ + F CG + R+ + DK
Sbjct: 25 DMGAVQDAGSSATQAEKEEV--DGRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 82
Query: 70 YKKTPCGFCFLE 81
+ + P GF ++E
Sbjct: 83 FGQ-PKGFAYVE 93
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E++ ++YVGN+ Y T ++L F+ CG + R+ + D++ P GF ++E
Sbjct: 52 EERIDADNRSIYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIE 107
>gi|50290493|ref|XP_447678.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526988|emb|CAG60615.1| unnamed protein product [Candida glabrata]
Length = 211
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+T+YVGN+ T+E LYELF++ G +K++ DK + GF F+E
Sbjct: 6 ATIYVGNIDTKVTKELLYELFTQVGQVKKVKYPKDKISQEYQGFAFIE 53
>gi|449550073|gb|EMD41038.1| hypothetical protein CERSUDRAFT_62981 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E++K + +++VGN+ Y T E++ F CG I R+ + DK+ P G+ ++E
Sbjct: 73 EEDKAAADSRSIFVGNVDYSATPEEIQVHFQSCGVINRVTILCDKFTGHPKGYAYVE 129
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
K +R +K TL++G+LS+ TE+Q+YE F + GD++ + + D+ P GF +
Sbjct: 282 KRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGY 341
Query: 80 LE 81
++
Sbjct: 342 VQ 343
>gi|78213170|ref|YP_381949.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|78197629|gb|ABB35394.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
Length = 95
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLS+ +E L++LFS+ G++K + LD+ GF F+E
Sbjct: 2 TIYIGNLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVE 48
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+L +++++VGNL + T+E L E+F CG I R M D+ P GF +++
Sbjct: 393 HHELGEKSASVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYID 448
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ QE + R+ S ++VGNL + T+E L ++FS CGDI+R+ + D GF FL+
Sbjct: 285 SAQESVERSKS-VFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLD 341
>gi|33865457|ref|NP_897016.1| rna-binding protein RbpD [Synechococcus sp. WH 8102]
gi|33632626|emb|CAE07438.1| putativeRNA-binding protein RbpD [Synechococcus sp. WH 8102]
Length = 96
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLS+ +E L++LFS+ G++K + LD+ GF F+E
Sbjct: 2 TIYIGNLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVE 48
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S+AE+E++ ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++E
Sbjct: 60 SQAEKEEV--DARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVE 116
>gi|168702843|ref|ZP_02735120.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 94
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+VGN+S+ T EEQL E F++ G + ++ + D+ P GF F+E
Sbjct: 4 NLFVGNMSFATGEEQLREAFAQYGTVTKVQVVTDRETGRPRGFGFVE 50
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 45 SIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 91
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 45 SIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 91
>gi|449684562|ref|XP_002161704.2| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Hydra magnipapillata]
Length = 131
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++LY+ NLS T + L +F+K G I+ I + LD Y + P GFC+++
Sbjct: 11 NTSLYIRNLSSSTRSDDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQ 59
>gi|149242977|ref|XP_001526491.1| hypothetical protein LELG_03049 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450614|gb|EDK44870.1| hypothetical protein LELG_03049 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 356
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 17 QHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCG 76
+ F+G + E L + L+VGNL + TTE+ L E F CGDI RI M + G
Sbjct: 146 KSFEGRPEKTESKLPPSRILFVGNLGFDTTEDNLEEHFRHCGDIARIRMATFQDTGKCKG 205
Query: 77 FCFLE 81
F F++
Sbjct: 206 FAFID 210
>gi|85000163|ref|XP_954800.1| RNA poly(A)-binding protein [Theileria annulata strain Ankara]
gi|65302946|emb|CAI75324.1| RNA poly(A)-binding protein, putative [Theileria annulata]
Length = 176
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T ++L E F G I RI + +DKY P G+ ++E
Sbjct: 43 SIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKYTGHPKGYAYVE 89
>gi|425472294|ref|ZP_18851145.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9701]
gi|389881662|emb|CCI37811.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9701]
Length = 97
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL + +E + E+F + G+IKR+ +D+ K GF F+E
Sbjct: 2 SIYVGNLPFEVDQEDVVEVFKEYGEIKRVHFPMDRETKRKRGFAFVE 48
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+ L ++F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVE 48
>gi|146413939|ref|XP_001482940.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
gi|146392639|gb|EDK40797.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
Length = 220
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
KG E+E+ + ++Y+GN+ Y T +L + FS G + R+ + +K+ P GF +
Sbjct: 85 KGGDTEEERRDIDSRSIYIGNVDYGATPLELQQHFSSSGVVNRVTILTNKHTGQPKGFAY 144
Query: 80 LE 81
LE
Sbjct: 145 LE 146
>gi|348679138|gb|EGZ18955.1| hypothetical protein PHYSODRAFT_409429 [Phytophthora sojae]
Length = 167
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++Y+G + Y +T E+L LF CG I R+ + DK+ P G+ ++E
Sbjct: 78 TSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIE 125
>gi|426198097|gb|EKV48023.1| hypothetical protein AGABI2DRAFT_68353, partial [Agaricus bisporus
var. bisporus H97]
Length = 332
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E++K L + ++YVGN+ Y T E++ F CG I R+ + DK+ P G+ ++E
Sbjct: 44 EEDKNLIDSRSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVE 100
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma
virens Gv29-8]
Length = 171
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 45 SIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVE 91
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S+AE+E++ ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++E
Sbjct: 84 SQAEKEEV--DARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVE 140
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T ++L F CG I RI + DK+ P G+ ++E
Sbjct: 80 SVYVGNVDYAVTPQELQAHFQSCGPINRITILCDKFTGHPKGYAYIE 126
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
AE++K + S +YVGN+ Y T + L FS CG I RI + DK+ P G+ ++E
Sbjct: 84 AEEKKEIDKRS-VYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIE 140
>gi|320580999|gb|EFW95221.1| RNA-binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 343
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 19 FKGSRAEQEKLLRT---TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPC 75
F+G + E+ L + L+VGNLS+ TTEE L E F CG+I RI M +
Sbjct: 154 FEGRPQKAEEPLSKNPPSRVLFVGNLSFDTTEELLEEHFRHCGEIVRIRMATFEDSGKCK 213
Query: 76 GFCFLE 81
GFCF++
Sbjct: 214 GFCFID 219
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
QE+L T+TL++GNL + T++ +YE FS+ GDI + + D + GF ++E
Sbjct: 493 QEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVE 548
>gi|255732796|ref|XP_002551321.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
gi|240131062|gb|EER30623.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
Length = 409
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
L+VGNLS+ TTE+ L E F CGDI RI M + GF F++
Sbjct: 218 LFVGNLSFDTTEDNLEEHFRHCGDITRIRMATFQDTGKCKGFAFID 263
>gi|67623141|ref|XP_667853.1| splicing factor [Cryptosporidium hominis TU502]
gi|32399025|emb|CAD98265.1| splicing factor, probable [Cryptosporidium parvum]
gi|54659016|gb|EAL37616.1| splicing factor [Cryptosporidium hominis]
Length = 213
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+TLY GNL EE L ELFS+CG +K + + DK GF F+E
Sbjct: 20 ATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIE 67
>gi|449679958|ref|XP_002163300.2| PREDICTED: polyadenylate-binding protein 2-like [Hydra
magnipapillata]
Length = 224
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T +L + F CG + R+ + DK+ P GF ++E
Sbjct: 92 SVYVGNVDYSATASELEQHFHGCGSVNRVTILCDKFSGHPKGFAYVE 138
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+L V NL+Y TT E L +F +CGD+ I + D+Y + GF F+
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 60
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +YVGNLSY TTE++L FS+ GD++ + D+ GF F+E
Sbjct: 2 TNIYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVE 49
>gi|116747535|ref|YP_844222.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans
MPOB]
gi|116696599|gb|ABK15787.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans
MPOB]
Length = 122
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LYVGNLS+ T+ EQL ELFS+ G ++ + D+ GF F+E
Sbjct: 5 LYVGNLSFQTSSEQLRELFSQVGTVESATVVEDRESGRSRGFGFVE 50
>gi|50290735|ref|XP_447800.1| hypothetical protein [Candida glabrata CBS 138]
gi|38603385|dbj|BAD02472.1| hypothetical protein [Candida glabrata]
gi|49527111|emb|CAG60749.1| unnamed protein product [Candida glabrata]
Length = 144
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++Y+GN+S TT E++ E F CG IKRI M DK G+ ++E
Sbjct: 46 SIYIGNISLDTTPEEIDEHFKSCGVIKRITMLYDKNTGPSIGYAYVE 92
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L+V NL Y +TEE L +LFSK G + + +D K P GF F+
Sbjct: 395 EEEEDLADSGRLFVRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFV 450
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 6 SPSVE-LSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
SPSV+ + R + + Q++ L + L+V NL Y TE+ L +LFSK G I I
Sbjct: 357 SPSVQSKAESRPWEQRDKQELQQEDLSESGRLFVRNLPYSCTEDDLDKLFSKYGPISEIH 416
Query: 65 MGLDKYKKTPCGFCFL 80
+D K P GF F+
Sbjct: 417 FPIDSLTKKPKGFAFV 432
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPC---GFCFLE 81
TL++ NL++ T+EE L E+FSK G +K + K K GF F+E
Sbjct: 696 TLFIKNLNFSTSEETLKEVFSKVGTVKSCSISKKKDKSGSLLSMGFGFVE 745
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++ LYVGNL + TE +L ++F++ G + + + +DK+ P GF F+
Sbjct: 2 STKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFV 49
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ ++YVGN+ + T +L E F CG + R+ + +DK P GF ++E
Sbjct: 87 SKSIYVGNVDFSATPGELAEHFKTCGTVNRVTILMDKVTGRPKGFAYVE 135
>gi|218885302|ref|YP_002434623.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|347730840|ref|ZP_08863950.1| RNA recognition motif family protein [Desulfovibrio sp. A2]
gi|218756256|gb|ACL07155.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|347520346|gb|EGY27481.1| RNA recognition motif family protein [Desulfovibrio sp. A2]
Length = 88
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ LYVGNL + ++E L LFS G+++ + + +D+ P GF F+E
Sbjct: 2 SKKLYVGNLPFSSSESDLRALFSNHGEVQSVALIMDRETGRPRGFGFVE 50
>gi|449664457|ref|XP_002164882.2| PREDICTED: uncharacterized protein LOC100207209 [Hydra
magnipapillata]
Length = 1297
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 31 RTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++T LYVGNL+Y + E+ EL S+CG I+RI + DK G+ F+E
Sbjct: 103 QSTFMLYVGNLAYDCSLEKFRELASQCGAIERIFLVYDKKSGLSKGYGFVE 153
>gi|434391462|ref|YP_007126409.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428263303|gb|AFZ29249.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLS+ T++ L +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSFEVTQDDLSSIFAEYGTVKRVQLPTDRETGLPRGFGFVE 48
>gi|409243|gb|AAA27362.1| RNA-binding protein [Synechococcus sp.]
Length = 100
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLS+ TEE + E+F++ G + R+ + +D+ F F+E
Sbjct: 2 TIYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRAFAFIE 48
>gi|392402152|ref|YP_006438764.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390610106|gb|AFM11258.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 117
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL+Y TE+ L + FS+ G ++ M +D+ P GF F+E
Sbjct: 2 NIYVGNLAYSVTEQDLKQAFSEFGTVQSAKMIMDRDTGRPKGFAFVE 48
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E + F CG I R+ + LDK+ P G+ ++E
Sbjct: 83 SIFVGNVDYSASPEDIQSHFQSCGSINRVTILLDKFTGQPKGYAYVE 129
>gi|66475928|ref|XP_627780.1| U2 snRNP. Hsh49p, RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|46229319|gb|EAK90168.1| U2 snRNP. Hsh49p, RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 216
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+TLY GNL EE L ELFS+CG +K + + DK GF F+E
Sbjct: 23 ATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIE 70
>gi|420491020|ref|ZP_14989602.1| RNA binding protein [Helicobacter pylori Hp P-13]
gi|420524849|ref|ZP_15023256.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-13b]
gi|393106480|gb|EJC07024.1| RNA binding protein [Helicobacter pylori Hp P-13]
gi|393131120|gb|EJC31544.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-13b]
Length = 82
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+Y+GNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYIGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|170076900|ref|YP_001733538.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169884569|gb|ACA98282.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 84
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL Y E+ L E+F+ G +KR+ + +D+ + GF F+E
Sbjct: 2 SIYVGNLDYAVEEDDLREVFNDYGKVKRVYLPVDRETQRKRGFGFVE 48
>gi|431838574|gb|ELK00506.1| Embryonic polyadenylate-binding protein 2 [Pteropus alecto]
Length = 308
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EK+ ++YVGN+ Y T ++L F+ CG+++R+ + DK+ P G+ ++E
Sbjct: 179 EKMEVDHRSIYVGNVDYGGTAKELEAYFNHCGEVQRVTILCDKFSGHPKGYAYVE 233
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T E+L + F CG + R+ + +K+ P GF ++E
Sbjct: 101 SIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIE 147
>gi|428221393|ref|YP_007105563.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
7502]
gi|427994733|gb|AFY73428.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
7502]
Length = 96
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY ++E L E+F+ G +KR+ + D+ GF F++
Sbjct: 2 TIYVGNLSYQASQEDLMEVFNDYGKVKRVQLPTDRETGRMRGFAFVD 48
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 68 SIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVE 114
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 68 SIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVE 114
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 98
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL + ++ + E+F + G+IKR+ + +D+ K GF F+E
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVE 48
>gi|50307397|ref|XP_453677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642811|emb|CAH00773.1| KLLA0D13772p [Kluyveromyces lactis]
Length = 345
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 8 SVELSSYRDQHFKGSRAEQ-EKLLRTTS-TLYVGNLSYYTTEEQLYELFSKCGDIKRIIM 65
+V+ +S + H SRAE+ EK + S +++VGN++ T E L E F CG++ R+ +
Sbjct: 75 NVKTNSGKKDHHHQSRAERLEKQIELDSRSIFVGNITTEATAETLEEHFKDCGEVVRVTI 134
Query: 66 GLDKYKKTPCGFCFLE 81
+K P G+ ++E
Sbjct: 135 LYNKLTGAPKGYAYIE 150
>gi|172036857|ref|YP_001803358.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554661|ref|ZP_08973965.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171698311|gb|ACB51292.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553470|gb|EHC22862.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL Y TE L +FS G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVE 48
>gi|427738497|ref|YP_007058041.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427373538|gb|AFY57494.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 95
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY ++E L E+F++ G +KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYEVSQEGLNEVFAEYGTVKRVQIPTDRETGRVRGFAFVE 48
>gi|397625742|gb|EJK67902.1| hypothetical protein THAOC_10991, partial [Thalassiosira oceanica]
Length = 525
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVG + Y +T E+L F CG ++R+ + DK+ P GF +LE
Sbjct: 402 SVYVGQVDYSSTPEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLE 448
>gi|120537458|gb|AAI30002.1| LOC390748 protein [Homo sapiens]
Length = 255
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFC 78
S +EK+ ++YVGN+ Y + E+L FS+CG++ R+ + DK+ P G C
Sbjct: 135 SGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGCC 191
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E++ ++YVGN+ Y T ++L F+ CG + R+ + +++ P GF ++E
Sbjct: 29 EERIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIE 84
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + D+ R ++E + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 43 EMQATLDKETNELREDKEDI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 100
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 101 FTGHPKGYAYVE 112
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 34 STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++++V L + TTEEQL LF G + R+ + D+ P GF F+E
Sbjct: 2 TSIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVE 49
>gi|307353314|ref|YP_003894365.1| RNP-1 like RNA-binding protein [Methanoplanus petrolearius DSM
11571]
gi|307156547|gb|ADN35927.1| RNP-1 like RNA-binding protein [Methanoplanus petrolearius DSM
11571]
Length = 87
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TS LYVGNL+Y TE+QL ELFS+ GD+K + + K GF F+E
Sbjct: 3 TSKLYVGNLTYSVTEKQLEELFSQYGDVKSVRIIERK------GFGFVE 45
>gi|355715636|gb|AES05391.1| RNA binding motif protein 19 [Mustela putorius furo]
Length = 823
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L++ NL Y +TEE L +LFSK G + + +D K P GF F+
Sbjct: 397 EEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFV 452
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK---TPCGFCFLE 81
TL++ NL++ TTEE L ++FSK G +K + K K GF F+E
Sbjct: 736 TLFIKNLNFNTTEETLKDVFSKAGTVKSCSVSKKKNKAGALLSMGFGFVE 785
>gi|224140775|ref|XP_002323754.1| predicted protein [Populus trichocarpa]
gi|222866756|gb|EEF03887.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ S +D + ++ K + +++VGN+ Y T E++ + F CG + R+ + DK
Sbjct: 47 EMGSVQDPSASATASQANKEEVDSRSVFVGNVDYACTPEEVQQHFQACGTVNRVTIRSDK 106
Query: 70 YKKTPCGFCFLE 81
Y + P G+ ++E
Sbjct: 107 YGQ-PKGYAYVE 117
>gi|156082802|ref|XP_001608885.1| RNA binding protein [Babesia bovis T2Bo]
gi|154796135|gb|EDO05317.1| RNA binding protein, putative [Babesia bovis]
Length = 163
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T L E F G I RI + +DK+ P G+ ++E
Sbjct: 43 SIYVGNVDYSTKPHDLQEFFKASGQINRITIMVDKWTGKPKGYAYIE 89
>gi|425434851|ref|ZP_18815315.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389675575|emb|CCH95322.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
Length = 97
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L ++F + G++KR+ + +DK GF F+E
Sbjct: 2 SIFVGNLSYEISQEALVDVFREYGEVKRVHIPVDKETGRKRGFAFVE 48
>gi|195153805|ref|XP_002017814.1| GL17107 [Drosophila persimilis]
gi|194113610|gb|EDW35653.1| GL17107 [Drosophila persimilis]
Length = 225
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK T ++YVGN+ Y + E+L F CG I R+ + +K P GF F+E
Sbjct: 88 EEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAFIE 143
>gi|146421021|ref|XP_001486462.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
gi|146389877|gb|EDK38035.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
Length = 159
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y +T QL E FS G ++R+ + D+Y GF ++E
Sbjct: 40 SIYVGNVEYLSTPGQLEEFFSAVGTVERVTILFDRYSGLSKGFAYIE 86
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + D R +E + + +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 47 EMQASVDAQTDNLRESKEDI--DSRSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 104
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 105 FTGHPKGYAYVE 116
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EQ + ++ +++VGN+ Y TEE+L E+FS+ G + + + D+ P GF F E
Sbjct: 7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
>gi|388498186|gb|AFK37159.1| unknown [Lotus japonicus]
Length = 217
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++ + +D ++AE+E++ ++YVGN+ Y T E++ + F CG + R+ + DK
Sbjct: 71 DMGAVQDAGSSATQAEKEEV--DGRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 128
Query: 70 YKKTPCGFCFLE 81
+ + P GF ++E
Sbjct: 129 FGQ-PKGFAYVE 139
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L+V NL Y +TEE L +LFSK G + I +D K P GF F+
Sbjct: 393 EEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKFGPLSEIHYPIDSLIKKPKGFAFV 448
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+L V NL+Y TT E L +F +CGD+ I + D+Y + GF F+
Sbjct: 3 SLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 48
>gi|386752810|ref|YP_006226029.1| RNA binding protein [Helicobacter pylori Shi169]
gi|384559068|gb|AFH99535.1| RNA binding protein [Helicobacter pylori Shi169]
Length = 82
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+Y+GNL Y T EQ+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYIGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++ + +D ++AE+E++ ++YVGN+ Y T E++ + F CG + R+ + DK
Sbjct: 71 DMGAVQDAGSSATQAEKEEV--DGRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 128
Query: 70 YKKTPCGFCFLE 81
+ + P GF ++E
Sbjct: 129 FGQ-PKGFAYVE 139
>gi|386747352|ref|YP_006220560.1| RNA-binding protein [Helicobacter cetorum MIT 99-5656]
gi|384553594|gb|AFI05350.1| RNA-binding protein [Helicobacter cetorum MIT 99-5656]
Length = 82
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T E++ ELFS+ G++ + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATNEEVKELFSQFGEVFSVKLISDRETKRPKGFGFVE 49
>gi|409992615|ref|ZP_11275795.1| RNA-binding protein [Arthrospira platensis str. Paraca]
gi|291568118|dbj|BAI90390.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409936532|gb|EKN78016.1| RNA-binding protein [Arthrospira platensis str. Paraca]
Length = 94
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L E+F++ G +KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYDVTDEDLKEVFAEYGTVKRVHLPTDRETGKFRGFAFVE 48
>gi|284108895|ref|ZP_06386469.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283829840|gb|EFC34132.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 90
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNLSY TT+++L +LF++ G ++ + D+Y GF F+E
Sbjct: 5 IYVGNLSYSTTDQELQDLFAQHGTVQSANVVTDRYTGRSRGFGFVE 50
>gi|219519920|gb|AAI45635.1| Pabpnl1 protein [Mus musculus]
Length = 288
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
SR +E + +++VGN+ Y + +L FS CG+I R+ + DK+ P G+ ++E
Sbjct: 146 SRTSKENVEADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 205
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L++ NL Y +TEE L +LFSK G + + +D K P GF F+
Sbjct: 395 EEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFV 450
>gi|300865997|ref|ZP_07110731.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
gi|300335988|emb|CBN55889.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
Length = 101
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L + F++ G +KR+ + D+ + GF F+E
Sbjct: 2 SIYVGNLSYEVTQEHLSQTFAEYGTVKRVQLPTDRETGSLRGFAFVE 48
>gi|323337227|gb|EGA78481.1| Sgn1p [Saccharomyces cerevisiae Vin13]
Length = 166
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
S+E + Q +L + +++VGN++ T EQ+ + F CG IKRI +
Sbjct: 38 SIEGTPQVSQKLSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLY 97
Query: 68 DKYKKTPCGFCFLE 81
D+ TP G+ ++E
Sbjct: 98 DRNTGTPKGYGYIE 111
>gi|209527711|ref|ZP_03276207.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376007663|ref|ZP_09784855.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209491832|gb|EDZ92191.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375323983|emb|CCE20608.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 95
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L E+F++ G +KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYDVTDEDLKEVFAEYGTVKRVHLPTDRETGKFRGFAFVE 48
>gi|218847772|ref|NP_001136383.1| small nuclear ribonucleoprotein 35kDa (U11/U12) [Xenopus
(Silurana) tropicalis]
gi|195539787|gb|AAI67878.1| Unknown (protein for MGC:135224) [Xenopus (Silurana) tropicalis]
Length = 264
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TLYV LS TTEE+L E+FS+ GDIKRI + D G+ F+E
Sbjct: 52 TLYVARLSQQTTEEKLKEVFSRYGDIKRIRLVRDFITGFSKGYAFIE 98
>gi|260434962|ref|ZP_05788932.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260412836|gb|EEX06132.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 95
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLS+ +E L++LFS+ G++K + LD+ GF F+E
Sbjct: 2 TIYIGNLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVE 48
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++AE+E++ + ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++
Sbjct: 97 ATQAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYV 153
Query: 81 E 81
E
Sbjct: 154 E 154
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++VGNL++ TTEEQL ++FS G + + + D P GF F+E
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVE 46
>gi|115402163|ref|XP_001217158.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
gi|114189004|gb|EAU30704.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
Length = 185
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + DQ + R ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQATLDQQSENLREDKEEI--DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGF 77
+ P G
Sbjct: 103 FTGQPKGM 110
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 95
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L ++F++ G +KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVE 48
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+ L+VG LS+YTTE+ L E FS+ G++ + + +D+ + GF F++
Sbjct: 31 TTKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQ 79
>gi|126656762|ref|ZP_01727976.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126621982|gb|EAZ92690.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 83
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL Y TE L +FS G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVE 48
>gi|18423239|ref|NP_568751.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|15809838|gb|AAL06847.1| AT5g51120/MWD22_6 [Arabidopsis thaliana]
gi|15982733|gb|AAL09819.1| unknown protein [Arabidopsis thaliana]
gi|19310785|gb|AAL85123.1| unknown protein [Arabidopsis thaliana]
gi|21358850|gb|AAM47151.1| unknown protein [Arabidopsis thaliana]
gi|332008655|gb|AED96038.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 227
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S AE+E++ + ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++E
Sbjct: 93 SAAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVE 149
>gi|323304471|gb|EGA58240.1| Sgn1p [Saccharomyces cerevisiae FostersB]
Length = 141
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
S+E + Q +L + +++VGN++ T EQ+ + F CG IKRI +
Sbjct: 38 SIEGTPQVSQKLSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKBCGQIKRITLLY 97
Query: 68 DKYKKTPCGFCFLE 81
D+ TP G+ ++E
Sbjct: 98 DRNTGTPKGYGYIE 111
>gi|148679749|gb|EDL11696.1| poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 288
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
SR +E + +++VGN+ Y + +L FS CG+I R+ + DK+ P G+ ++E
Sbjct: 146 SRTSKENVEADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 205
>gi|21536704|gb|AAM61036.1| contains similarity to poly(A)-binding protein II [Arabidopsis
thaliana]
Length = 227
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
++ + +D S AE+E++ + ++YVGN+ Y T E++ + F CG + R+ + DK
Sbjct: 81 DMGASQDPSGGVSAAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 138
Query: 70 YKKTPCGFCFLE 81
+ + P GF ++E
Sbjct: 139 FGQ-PKGFAYVE 149
>gi|348550266|ref|XP_003460953.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Cavia
porcellus]
Length = 273
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y T E+L F +CG++ R+ + DK+ P G+ ++E
Sbjct: 143 SIYVGNVDYGGTAEELEAHFHRCGEVHRVTILCDKFSGHPKGYAYVE 189
>gi|428214973|ref|YP_007088117.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428003354|gb|AFY84197.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 106
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L +F++ G +KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYEVTQEDLNAVFAEYGSVKRVNLPTDRETGRVRGFAFVE 48
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+L V NL+Y TT E L +F +CGD+ I + D+Y + GF F+
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFV 60
>gi|354465338|ref|XP_003495137.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 2
[Cricetulus griseus]
Length = 281
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + +L FS CG+I R+ + DK+ P G+ ++E
Sbjct: 142 KEKVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 197
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 ELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDK 69
E+ + D+ + ++E++ +++VGN+ Y + E++ F CG I R+ + LDK
Sbjct: 45 EMQANLDKENDNLKEDKEEI--DARSIFVGNVDYGASPEEIQTHFQSCGSINRVTILLDK 102
Query: 70 YKKTPCGFCFLE 81
+ P G+ ++E
Sbjct: 103 FTGQPKGYAYVE 114
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L++ NL Y +TEE L +LFSK G + + +D K P GF F+
Sbjct: 383 EEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFV 438
>gi|126654754|ref|ZP_01726288.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126623489|gb|EAZ94193.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 97
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E L E+F+ G +KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYDVTKEDLSEVFTDYGQVKRVHIPTDRDTGRMRGFAFVE 48
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
L++ NL Y TEE+L +LFSK G + ++ +D K P G+ F+
Sbjct: 390 LFIRNLPYTCTEEELQDLFSKHGPLAEVVFPIDNLTKKPKGYAFV 434
>gi|428305785|ref|YP_007142610.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428247320|gb|AFZ13100.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 102
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY E L +F++ G +KR+ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVKEGDLSHIFAEYGTVKRVQLPTDRETGRPRGFGFVE 48
>gi|47230518|emb|CAF99711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 172
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFC 78
+E++ ++YVGN+ Y T ++L F+ CG + R+ + D++ P GFC
Sbjct: 50 EERIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFC 102
>gi|428203044|ref|YP_007081633.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980476|gb|AFY78076.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 103
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TE +L +F++ G +KR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYEVTEAELNSVFAEYGSVKRVHLPTDRETGRMRGFAFVE 48
>gi|403357954|gb|EJY78612.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403360696|gb|EJY80032.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403365989|gb|EJY82785.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403375247|gb|EJY87595.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 183
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++V N+ Y +L + F +CG++KR+ + +DK + P G F+E
Sbjct: 64 SVFVKNVDYSAEPAELKDHFKECGEVKRVTIPVDKASQQPKGHAFIE 110
>gi|313225726|emb|CBY07200.1| unnamed protein product [Oikopleura dioica]
Length = 247
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LY G+LSY TTEE++ ELF G+I + M D KK GF F+E
Sbjct: 31 LYAGSLSYDTTEEEIKELFESYGEITSLTMSYDVEKKHHKGFAFVE 76
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T E L FSK G++ ++ + D+ P GF F+E
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVE 48
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNLSY TE +L E+FS G++ R + DK GF F+E
Sbjct: 3 NIYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVE 49
>gi|55925591|ref|NP_001007463.1| embryonic polyadenylate-binding protein 2 [Mus musculus]
gi|81910338|sp|Q5XFR0.1|EPAB2_MOUSE RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|54111431|tpg|DAA02003.1| TPA_exp: embryonic poly(A) binding protein 2 [Mus musculus]
gi|223461244|gb|AAI41318.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
gi|223461425|gb|AAI41317.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 273
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
SR +E + +++VGN+ Y + +L FS CG+I R+ + DK+ P G+ ++E
Sbjct: 131 SRTSKENVEADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 190
>gi|425448845|ref|ZP_18828689.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|389767706|emb|CCI06978.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
Length = 97
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L E+F G+++R+ + +DK GF F+E
Sbjct: 2 SIFVGNLSYEISQEDLVEVFKDYGEVQRVHIPVDKETGRKRGFAFVE 48
>gi|403416120|emb|CCM02820.1| predicted protein [Fibroporia radiculosa]
Length = 255
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E +K + +++VGN+ Y T E++ F CG I R+ + DK+ P GF ++E
Sbjct: 73 EDDKAAADSRSIFVGNVDYAATPEEIQMHFQACGVINRVTILCDKFTGHPKGFAYVE 129
>gi|345489249|ref|XP_001601106.2| PREDICTED: hypothetical protein LOC100116671 [Nasonia vitripennis]
Length = 299
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
L V LS T+E+ LY +FSK G ++R+++ +D K P GFCF+
Sbjct: 136 LGVFGLSICTSEQSLYHIFSKYGPVERVVVVIDAKTKRPKGFCFV 180
>gi|313212200|emb|CBY36213.1| unnamed protein product [Oikopleura dioica]
Length = 247
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LY G+LSY TTEE++ ELF G+I + M D KK GF F+E
Sbjct: 31 LYAGSLSYDTTEEEIKELFESYGEITSLTMSYDVEKKHHKGFAFVE 76
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLSY TE+ L +F++ G++K++ + +D+ GF F+E
Sbjct: 2 TVYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFVE 48
>gi|440908773|gb|ELR58758.1| Embryonic polyadenylate-binding protein 2, partial [Bos grunniens
mutus]
Length = 272
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EK ++YVGN+ Y T ++L F+ CG+I R+ + DK+ P G+ ++E
Sbjct: 134 EKAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIE 188
>gi|37522099|ref|NP_925476.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35213098|dbj|BAC90471.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 123
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T++VGNL + TE+ + E FS+ G +K + + D+ P GF F+E
Sbjct: 2 TVFVGNLPFSVTEQDITEAFSEYGTVKSVKIPTDRETGRPRGFAFVE 48
>gi|392412892|ref|YP_006449499.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390626028|gb|AFM27235.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 109
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNLS+ T+E+QL ELF G ++ + DK P GF F++
Sbjct: 5 NIYVGNLSFQTSEDQLKELFESFGQVESATIISDKTTGRPRGFGFVK 51
>gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
gi|297309932|gb|EFH40356.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S AE+E++ + ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++E
Sbjct: 95 SAAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVE 151
>gi|296478138|tpg|DAA20253.1| TPA: ePABP2-like [Bos taurus]
Length = 272
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EK ++YVGN+ Y T ++L F+ CG+I R+ + DK+ P G+ ++E
Sbjct: 134 EKAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIE 188
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E++ ++YVGN+ Y T ++L F+ CG + R+ + +++ P GF ++E
Sbjct: 58 EERIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIE 113
>gi|452824970|gb|EME31969.1| nucleolar RNA-binding protein [Galdieria sulphuraria]
Length = 254
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 5 ISPSVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRII 64
I+ S+ S ++++H K R E+ + ++VGNL + +EQ+YE+FSK G +K +
Sbjct: 97 IALSLNGSVFQNKHLKIDRDERPTV-SVGYCIFVGNLPFDVEDEQVYEVFSKIGSVKYVR 155
Query: 65 MGLDKYKKTPCGF---CFLE 81
+ DK+ GF CF E
Sbjct: 156 IVRDKHTGFGKGFGYVCFKE 175
>gi|443328295|ref|ZP_21056895.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442792141|gb|ELS01628.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 96
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T+E + E+F++ G IKR+ + D+ GF F+E
Sbjct: 2 SIYVGNLSYEVTKEDIEEVFNEYGTIKRVHLPTDRETGRFRGFAFVE 48
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L+V NL Y +TEE+L +LFS+ G + + +D K P GF F+
Sbjct: 395 EEEEDLADSGRLFVRNLPYTSTEEELEQLFSRYGPLSELHYPIDGLTKKPKGFAFV 450
>gi|224134274|ref|XP_002321779.1| predicted protein [Populus trichocarpa]
gi|222868775|gb|EEF05906.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 17 QHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCG 76
Q ++AE+E++ + ++YVGN+ Y T E++ + F CG + R+ + DK+ + P G
Sbjct: 82 QGASATQAEKEEV--DSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKG 138
Query: 77 FCFLE 81
F ++E
Sbjct: 139 FAYVE 143
>gi|387169522|gb|AFJ66183.1| hypothetical protein 11M19.19 [Arabidopsis halleri]
Length = 228
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 22 SRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
S AE+E++ + ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++E
Sbjct: 95 SAAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVE 151
>gi|307151256|ref|YP_003886640.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306981484|gb|ADN13365.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 97
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL + E+ + E+F+ G +KR+ M +DK GF F+E
Sbjct: 2 SIYVGNLPFEVEEKHINEIFADYGQVKRVYMPVDKETGRRRGFAFVE 48
>gi|354568550|ref|ZP_08987714.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540273|gb|EHC09750.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 106
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY EE L E+F++ G +K++ + D+ GF F+E
Sbjct: 2 SIYVGNLSYQVREEDLREVFAEYGTVKKVQLPTDRDTGRVRGFAFVE 48
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T E L FSK G++ ++ + DK P GF F++
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVD 48
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 25 EQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
E+E+ L + L+V NL Y +TEE L +LFS+ G + + +D K P GF F+
Sbjct: 386 EEEEDLADSGRLFVRNLPYSSTEEDLEQLFSRFGPLSELHYPIDSLTKKPKGFAFV 441
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKK---TPCGFCFLE 81
TL++ NL++ TTEE L E+FS+ G +K + K K GF F+E
Sbjct: 723 TLFIKNLNFTTTEETLKEVFSRVGMVKSCSVSKKKNKTGELLSMGFGFVE 772
>gi|282896133|ref|ZP_06304159.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281199051|gb|EFA73926.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 98
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY T++ L +FS+ G++KR+ + D+ GF F+E
Sbjct: 2 SVYVGNLSYEVTQDALTAVFSEYGEVKRVQIPTDRETGRVRGFAFVE 48
>gi|354465336|ref|XP_003495136.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 1
[Cricetulus griseus]
Length = 275
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + +L FS CG+I R+ + DK+ P G+ ++E
Sbjct: 136 KEKVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 191
>gi|386755840|ref|YP_006229057.1| hypothetical protein HPPC18_04085 [Helicobacter pylori PeCan18]
gi|420440632|ref|ZP_14939587.1| RNA binding protein [Helicobacter pylori Hp H-30]
gi|420474344|ref|ZP_14973020.1| RNA binding protein [Helicobacter pylori Hp H-19]
gi|420484188|ref|ZP_14982814.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-3]
gi|420499955|ref|ZP_14998507.1| RNA binding protein [Helicobacter pylori Hp P-26]
gi|420514547|ref|ZP_15013018.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-3b]
gi|384562098|gb|AFI02564.1| hypothetical protein HPPC18_04085 [Helicobacter pylori PeCan18]
gi|393055787|gb|EJB56700.1| RNA binding protein [Helicobacter pylori Hp H-30]
gi|393089480|gb|EJB90120.1| RNA binding protein [Helicobacter pylori Hp H-19]
gi|393101055|gb|EJC01628.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-3]
gi|393149189|gb|EJC49501.1| RNA binding protein [Helicobacter pylori Hp P-26]
gi|393156693|gb|EJC56956.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-3b]
Length = 82
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T +Q+ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSDQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
>gi|225454892|ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++AE+E++ + ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++
Sbjct: 88 ATQAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYV 144
Query: 81 E 81
E
Sbjct: 145 E 145
>gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1]
Length = 208
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E + F CG I R+ + LDK+ P G+ ++E
Sbjct: 85 SIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKFTGQPKGYAYVE 131
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+L V NL Y T+ +++ LFS+ G+I+ + + LD Y K P GF F+E
Sbjct: 14 SLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVE 60
>gi|344237967|gb|EGV94070.1| Embryonic polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+EK+ ++YVGN+ Y + +L FS CG+I R+ + DK+ P G+ ++E
Sbjct: 136 KEKVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 191
>gi|159490330|ref|XP_001703132.1| hypothetical protein CHLREDRAFT_108674 [Chlamydomonas
reinhardtii]
gi|158270762|gb|EDO96597.1| predicted protein [Chlamydomonas reinhardtii]
Length = 68
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
L++G LS+ TTEE+L E F+K G+++ +++ D+ + P GF F+
Sbjct: 3 LFLGGLSWDTTEEKLKEYFAKYGEVQDVVVMRDRVTRKPRGFGFI 47
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGN+ Y +T E+L F CG + R+ + DK+ P G+ ++E
Sbjct: 47 SVYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKGYAYIE 93
>gi|427734808|ref|YP_007054352.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427369849|gb|AFY53805.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 98
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+YVGNLSY TE L +F+ G++ R+++ D+ GF F++
Sbjct: 2 TIYVGNLSYRATEADLRAVFTDYGEVTRVVLPTDRETGRMRGFAFVD 48
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 36 LYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
LYVGNLSY TTE+ L LFS+ G++ + D+ + GF F+E
Sbjct: 5 LYVGNLSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIE 50
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
+L V NL+Y TT E L +F +CG++ I + D+Y + GF F+
Sbjct: 24 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 69
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
++AE+E++ ++YVGN+ Y T E++ + F CG + R+ + DK+ + P GF ++
Sbjct: 79 ATQAEKEEV--DARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYV 135
Query: 81 E 81
E
Sbjct: 136 E 136
>gi|239607722|gb|EEQ84709.1| nucleic acid-binding protein [Ajellomyces dermatitidis ER-3]
Length = 153
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
+GS + + T TL++GNLS+ T+ +L E+F ++K + + +DK P GF
Sbjct: 16 RGSTEPKTRATGPTKTLFIGNLSFEMTDRELNEMFKDIPNVKDVRVSVDKRTGRPRGFAH 75
Query: 80 LE 81
+
Sbjct: 76 AD 77
>gi|209882389|ref|XP_002142631.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
gi|209558237|gb|EEA08282.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
Length = 213
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 11 LSSYRDQHFKGSRAEQEKLLRTT--STLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLD 68
+S +QH+ E +++ +TLY GNL EE L ELF++ G IK + + D
Sbjct: 2 ISQNTNQHYVRPVTEIQQIFDKNQEATLYCGNLDNRVDEELLAELFAQTGPIKSVYIPRD 61
Query: 69 KYKKTPCGFCFLE 81
K T GF F+E
Sbjct: 62 KVTGTHSGFGFIE 74
>gi|206901421|ref|YP_002251463.1| RNA-binding region RNP-1 [Dictyoglomus thermophilum H-6-12]
gi|206740524|gb|ACI19582.1| RNA-binding region RNP-1 [Dictyoglomus thermophilum H-6-12]
Length = 96
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
TLYVGNLS+ TTEE + LF G+I+ + + D+ GF F+E
Sbjct: 4 TLYVGNLSWQTTEEDIKGLFGGEGEIQSVRLITDRNTGRSKGFAFVE 50
>gi|393246337|gb|EJD53846.1| RNA-binding domain-containing protein, partial [Auricularia
delicata TFB-10046 SS5]
Length = 170
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 24 AEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
E++K ++YVGN+ Y + E++ F CG I R+ + DK+ P G+ ++E
Sbjct: 39 GEEDKDAVDARSVYVGNVDYSASPEEIQAHFQSCGTINRVTILCDKFTGHPKGYAYVE 96
>gi|254581722|ref|XP_002496846.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
gi|238939738|emb|CAR27913.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
Length = 289
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+S T E + E F++CG+IKRI + DK+ P G+ +++
Sbjct: 83 SIFVGNISPDVTPEIIEEHFAECGEIKRITLLHDKHTGVPKGYAYVQ 129
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
S LYV LS+ TTEE L F + G + + + +++ K P GF FL
Sbjct: 65 AASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFL 113
>gi|428204727|ref|YP_007083316.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427982159|gb|AFY79759.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 98
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNLSY TEE L +F++ G ++R+ + D GF F+E
Sbjct: 2 SIYVGNLSYEVTEEALNSVFAEFGSVRRVHLPTDHETGRVRGFAFVE 48
>gi|427723348|ref|YP_007070625.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355068|gb|AFY37791.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 83
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
++YVGNL Y E+ L E+F+ G +KR+ + +D+ GF F+E
Sbjct: 2 SIYVGNLDYAVEEDDLKEVFADYGTVKRVYLPMDRETNRKRGFGFVE 48
>gi|408396974|gb|EKJ76125.1| hypothetical protein FPSE_03600 [Fusarium pseudograminearum CS3096]
Length = 207
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E + F CG I R+ + LDK+ P G+ ++E
Sbjct: 84 SIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKFTGQPKGYAYVE 130
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGN+ Y + E++ F CG I R+ + LDK+ P G+ ++E
Sbjct: 92 SVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVE 138
>gi|426243462|ref|XP_004015574.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Ovis aries]
Length = 272
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 27 EKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
EK ++YVGN+ Y T ++L F+ CG+I R+ + DK+ P G+ ++E
Sbjct: 134 EKAEADHRSVYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIE 188
>gi|357635300|ref|ZP_09133178.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|357583854|gb|EHJ49187.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
Length = 92
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 33 TSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+ +YVGNL + TTE+ + +LF++ G+++ + + D+ P GF F+E
Sbjct: 2 SKNIYVGNLPFRTTEDSVRDLFARYGEVQSVKLISDRETGKPRGFGFVE 50
>gi|116073022|ref|ZP_01470284.1| RNA-binding protein RbpD [Synechococcus sp. RS9916]
gi|116068327|gb|EAU74079.1| RNA-binding protein RbpD [Synechococcus sp. RS9916]
Length = 107
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
T+Y+GNLS+ +E L +LFS+ G++K + LD+ GF F+E
Sbjct: 2 TIYIGNLSFQAEQEDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVE 48
>gi|425440322|ref|ZP_18820627.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
gi|389719273|emb|CCH96865.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
Length = 98
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+++VGNLSY ++E L ++F + G++KR+ + +D+ GF F+E
Sbjct: 2 SIFVGNLSYEISQEALVDVFREYGEVKRVHIPVDRETGRKRGFAFVE 48
>gi|323354513|gb|EGA86350.1| Sgn1p [Saccharomyces cerevisiae VL3]
gi|365765027|gb|EHN06542.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 141
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 8 SVELSSYRDQHFKGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGL 67
S+E + Q +L + +++VGN++ T EQ+ + F CG IKRI +
Sbjct: 38 SIEGTPQVSQKLSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLY 97
Query: 68 DKYKKTPCGFCFLE 81
D+ TP G+ ++E
Sbjct: 98 DRNTGTPKGYGYIE 111
>gi|226466604|emb|CAX69437.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[Schistosoma japonicum]
Length = 414
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E +T +++VGN+ Y TEE+L ELFSK G + + D+ P G+ F E
Sbjct: 8 KEAAEKTARSIFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCE 63
>gi|256085765|ref|XP_002579083.1| rna recognition motif containing protein [Schistosoma mansoni]
gi|360043212|emb|CCD78624.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 412
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 26 QEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+E +T +++VGN+ Y TEE+L ELFSK G + + D+ P G+ F E
Sbjct: 8 KEAAEKTARSIFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCE 63
>gi|196230311|ref|ZP_03129174.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196225908|gb|EDY20415.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 185
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 32 TTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
T+ LYVGNLSY TE L ELF+ G +K + KY + GF F+
Sbjct: 96 TSPKLYVGNLSYDATESDLSELFNGVGTVKSAEIVSHKYNEKSKGFGFV 144
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 20 KGSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCF 79
K ++ +K TL++G+LS+ TE+Q+YE F + GD++ + + D+ P GF +
Sbjct: 280 KRAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGY 339
Query: 80 LE 81
++
Sbjct: 340 VQ 341
>gi|170054071|ref|XP_001862961.1| cleavage stimulation factor 64 kDa subunit [Culex
quinquefasciatus]
gi|167874431|gb|EDS37814.1| cleavage stimulation factor 64 kDa subunit [Culex
quinquefasciatus]
Length = 400
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 21 GSRAEQEKLLRTTSTLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFL 80
G +++Q + ++ +++VGN+ Y TEE+L ++FS+ G + + + D+ P G+ F
Sbjct: 2 GDKSDQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVISLKLVFDRESGKPKGYGFC 61
Query: 81 E 81
E
Sbjct: 62 E 62
>gi|425790737|ref|YP_007018654.1| RNA-binding protein [Helicobacter pylori Aklavik86]
gi|425629052|gb|AFX89592.1| RNA-binding protein [Helicobacter pylori Aklavik86]
Length = 82
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 35 TLYVGNLSYYTTEEQLYELFSKCGDIKRIIMGLDKYKKTPCGFCFLE 81
+YVGNL Y T E++ ELFS+ G + + + D+ K P GF F+E
Sbjct: 3 NIYVGNLVYSATSEEVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE 49
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,198,640,340
Number of Sequences: 23463169
Number of extensions: 39328462
Number of successful extensions: 126184
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4989
Number of HSP's successfully gapped in prelim test: 719
Number of HSP's that attempted gapping in prelim test: 119234
Number of HSP's gapped (non-prelim): 7623
length of query: 81
length of database: 8,064,228,071
effective HSP length: 52
effective length of query: 29
effective length of database: 6,844,143,283
effective search space: 198480155207
effective search space used: 198480155207
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)