RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5180
(192 letters)
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development,
SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding,
nucleus, phosphoprotein; NMR {Homo sapiens}
Length = 116
Score = 110 bits (278), Expect = 6e-32
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 40/140 (28%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
+ L WYHGAIPR A+E+++ +GDFL+R+ +PG YVLS S Q HF+I
Sbjct: 12 KPLAEQDWYHGAIPRIEAQELLKKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQ---- 67
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQFEDDLFDTVPDLITFYV 145
Y ++FE F +P LI +
Sbjct: 68 ------------------------------------YVDNMYRFEGTGFSNIPQLIDHHY 91
Query: 146 GSGKPISSLSGAKIKSPKNR 165
+ + I+ SG + +P +
Sbjct: 92 TTKQVITKKSGVVLLNPIPK 111
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth
regulation, transforming protein, alternative
initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB:
1tce_A*
Length = 104
Score = 109 bits (275), Expect = 1e-31
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQ 86
LR W+HG + R AE +++ GDFL+R+ T+ PG YVL+ + Q H ++
Sbjct: 3 QLRGEPWFHGKLSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLL------ 56
Query: 87 PDTVYERVQFQFEDDLFDTVPDLITFYV 114
V + +D F++V LI++++
Sbjct: 57 ---VDPEGVVRTKDHRFESVSHLISYHM 81
>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain,
feline sarcoma oncogene, structural genomics; NMR {Homo
sapiens} PDB: 2dcr_A
Length = 114
Score = 104 bits (260), Expect = 2e-29
Identities = 30/141 (21%), Positives = 50/141 (35%), Gaps = 41/141 (29%)
Query: 25 NRDLRSHAWYHGAIPRSRAEEIIENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
+ L WYHGAIPR+ E++ + GDFL+R+ YVLS + HF+I
Sbjct: 10 QKPLHEQLWYHGAIPRAEVAELLVHSGDFLVRESQG-KQEYVLSVLWDGLPRHFIIQS-- 66
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 144
++ E + F ++P LI
Sbjct: 67 --------------------------------------LDNLYRLEGEGFPSIPLLIDHL 88
Query: 145 VGSGKPISSLSGAKIKSPKNR 165
+ + +P++ SG +
Sbjct: 89 LSTQQPLTKKSGVVLHRAVPS 109
>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein
binding/transferase complex; HET: PTR; NMR {Homo
sapiens} SCOP: d.93.1.1
Length = 109
Score = 97.6 bits (243), Expect = 8e-27
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 32 AWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV------ 83
+WY G + R A +++ G FL+RD ++ PG+YVLS ++ H++IN
Sbjct: 1 SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPV 60
Query: 84 ---VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
QP + + D FD++P L+ FY
Sbjct: 61 PPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFY 93
>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 111
Score = 87.3 bits (217), Expect = 7e-23
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
AWY G + R A+ ++ G FL+RD ++ PG+YVLS ++ H++IN +
Sbjct: 15 SSDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSL- 73
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+F+ D FD +P L+ FY
Sbjct: 74 -------PNRRFKIGDQEFDHLPALLEFY 95
>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide
binding protein; HET: PTR; 1.80A {Mus musculus} SCOP:
d.93.1.1 PDB: 1r1q_A* 1r1s_A*
Length = 100
Score = 83.8 bits (208), Expect = 1e-21
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
D+ W+H + R +AE ++ G F+IR S PG++ +S + HF + +
Sbjct: 5 DIEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRD- 63
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + + F ++ L+ +Y
Sbjct: 64 -------TKGNYFLWTEKFPSLNKLVDYY 85
>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine,
tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo
sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A
Length = 117
Score = 83.9 bits (208), Expect = 2e-21
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 22 SLDNRDLRSHAWYHGAIPRSRAEEIIENE----GDFLIRDCTSQPGNYVLSCMSKTQYLH 77
SL R+ W+HG I R ++ +I + G FL+R+ P +VLS + H
Sbjct: 5 SLSAAIHRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKH 64
Query: 78 FVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
++I + F + L+ F+
Sbjct: 65 YLILP---SEEEGRLYFSMDDGQTRFTDLLQLVEFH 97
>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain,
protein protein interactions, PTR residues, HYDR peptide
complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A*
1aya_A* 1ayb_A* 1ayc_A* 1ayd_A
Length = 109
Score = 82.7 bits (205), Expect = 4e-21
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 11/90 (12%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
+ S W+H I AE ++ +G FL R S PG++ LS H I
Sbjct: 3 HMTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNT 62
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + F T+ +L+ +Y
Sbjct: 63 --------GDYYDLYGGEKFATLAELVQYY 84
>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform;
adapter protein, signaling protein; 2.00A {Mus musculus}
PDB: 2hdx_A* 1rpy_A 1rqq_C*
Length = 111
Score = 82.7 bits (205), Expect = 5e-21
Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 28 LRSHAWYHGAIPRSRAEEII-----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINK 82
L + W+HG + R +A +++ + G FL+R ++ G VL+ + + H +
Sbjct: 6 LSGYPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRL-- 63
Query: 83 VVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
++ Q + + F ++ D++ +
Sbjct: 64 ------SLNAAGQCRVQHLHFQSIFDMLEHF 88
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein;
1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A
Length = 105
Score = 81.9 bits (203), Expect = 8e-21
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 29 RSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
R+ W+HG I R + II+ +G FL+RD S P +VL+ + +F I
Sbjct: 3 RTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPC- 61
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
D + F + L+ FY
Sbjct: 62 --EDDGQTFFSLDDGNTKFSDLIQLVDFY 88
>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 121
Score = 80.0 bits (198), Expect = 5e-20
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVI--- 80
L++ W+ GAI R+ AE+ + G FLIR+ SQ G++ LS + + H+ I
Sbjct: 13 LQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRL 72
Query: 81 --NKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ V F T+ + + +Y
Sbjct: 73 DEGGFFLTRRKV------------FSTLNEFVNYY 95
>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain,
signal transduction inhibitor nuclear protein; 1.9A
{Homo sapiens} SCOP: a.271.1.1 d.93.1.1
Length = 169
Score = 81.0 bits (200), Expect = 7e-20
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 21 LSLDNRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHF 78
L+ R+L WY G++ + A+E ++ EG FLIRD + +S + +
Sbjct: 7 LAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNL 66
Query: 79 VINKVVIQPD---TVYERVQFQFEDDLFDTVPDLITFYV 114
I D + + + + FD+V LI +YV
Sbjct: 67 RIE----YQDGKFRLDSIICVKSKLKQFDSVVHLIDYYV 101
>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*
Length = 138
Score = 79.7 bits (197), Expect = 1e-19
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
+DL H WY G + R+ AE I+ N +G FL+R + +S + H I
Sbjct: 21 QDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMT- 79
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ +Y E F + +L+ FY
Sbjct: 80 ---AEGLY----RITEKKAFRGLTELVEFY 102
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine
kinase, signal transduction, peptide recognition,
signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1
PDB: 1d1z_A 1d4w_A* 1m27_A*
Length = 104
Score = 78.1 bits (193), Expect = 2e-19
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 28 LRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
+ + A YHG I R E+++ +G +L+RD S PG Y L + + +++
Sbjct: 1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQT- 59
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + F + +LI+ +
Sbjct: 60 -ETGSWSAETAPGVHKRYFRKIKNLISAF 87
>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2
subdomain, PEST motif, protein complex, cytokine
regulator; HET: PTR; NMR {Mus musculus}
Length = 164
Score = 80.0 bits (197), Expect = 2e-19
Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 19/105 (18%)
Query: 20 ELSLDNRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLH 77
+ R L+ +Y A+ A ++ G FLIRD + Q + LS +++ +
Sbjct: 12 LVVNAVRKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKN 71
Query: 78 FVINKVVIQPDTVYERVQFQFEDD--------LFDTVPDLITFYV 114
I E F + D FD V L+ Y+
Sbjct: 72 LRIQ---------CEGGSFSLQSDPRSTQPVPRFDCVLKLVHHYM 107
>1jyr_A Growth factor receptor-bound protein 2; receptor binding,
regulatory, inhibitor, signaling protein-I complex; HET:
PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A*
1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E*
1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*
Length = 96
Score = 77.6 bits (192), Expect = 3e-19
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 30 SHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQ 86
S AW+ G IPR++AEE++ ++G FLIR+ S PG++ LS HF + +
Sbjct: 2 SMAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRD--- 58
Query: 87 PDTVYERVQFQFEDDLFDTVPDLITFY 113
++ F+++ +L+ ++
Sbjct: 59 -----GAGKYFLWVVKFNSLNELVDYH 80
>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal
transduction inhibitor, KIT regula phosphotyrosine,
signaling protein; HET: PTR; 1.45A {Homo sapiens}
Length = 141
Score = 78.3 bits (193), Expect = 4e-19
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Query: 24 DNRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVIN 81
+ + L WY G I R AE + N +G FL+RD + LS S + LH I
Sbjct: 17 ELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIE 76
Query: 82 KVVIQPDTVYERVQFQFEDDLFDTVPDLITFYV 114
+ + Q + + ++ DLI +
Sbjct: 77 ----HSNGRF-SFYEQPDVEGHTSIVDLIEHSI 104
>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding
domain, protein tyrosine kinase, signal transduction,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 77.7 bits (192), Expect = 4e-19
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
L H+WYHG + RS AE ++ + G FL+R+ S PG +S + + H+ IN
Sbjct: 13 LEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINT--- 69
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
D + + F T+ +L+ +
Sbjct: 70 TADGKV----YVTAESRFSTLAELVHHH 93
>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation,
binding specificity; HET: PTR MPD; 1.45A {Homo sapiens}
PDB: 1z3k_A 2ci9_A* 2ci8_A*
Length = 102
Score = 76.9 bits (190), Expect = 5e-19
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 33 WYHGAIPRSRAEEI---IENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPDT 89
WY+G + R +AE EGDFLIRD S P ++ +S + + HF + D
Sbjct: 7 WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQ----LVDN 62
Query: 90 VYERVQFQFEDDLFDTVPDLITFY 113
VY F T+ +L+ Y
Sbjct: 63 VY-----CIGQRRFHTMDELVEHY 81
>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune
system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB:
1ka7_A
Length = 128
Score = 77.8 bits (192), Expect = 5e-19
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 28 LRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
+ + A YHG I R E+++ +G +L+RD S PG Y L + + +++
Sbjct: 1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQT- 59
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + F + +LI+ +
Sbjct: 60 -ETGSWSAETAPGVHKRYFRKIKNLISAF 87
>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain,
phosphotyrosine binding, signaling protein, signaling
protein-antagonist complex; HET: PTR; 1.60A {Homo
sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A*
3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A*
2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A*
1fyr_A* ...
Length = 117
Score = 76.9 bits (190), Expect = 8e-19
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
+++ H W+ G IPR++AEE++ ++G FLIR+ S PG++ LS HF KV
Sbjct: 2 EMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHF---KV 58
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ ++ F+++ +L+ ++
Sbjct: 59 LRDGAG-----KYFLWVVKFNSLNELVDYH 83
>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2
domain, signaling protein; 2.30A {Homo sapiens}
Length = 126
Score = 77.0 bits (190), Expect = 1e-18
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
RS W+H I R A+ +I +G FL+RD S P +VLS + HF I V
Sbjct: 23 HRSQPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPV 82
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + F + L+ FY
Sbjct: 83 EDDGEMFH---TLDDGHTRFTDLIQLVEFY 109
>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding
protein, antibody mimic, protein-protein SH2 domain,
ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB:
3uyo_A 3t04_A 1ab2_A
Length = 112
Score = 76.1 bits (188), Expect = 1e-18
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
L H+WYHG + R+ AE ++ + G FL+R+ S PG +S + + H+ IN
Sbjct: 2 LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINT--- 58
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
D + + F+T+ +L+ +
Sbjct: 59 ASDGKL----YVSSESRFNTLAELVHHH 82
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 81.1 bits (201), Expect = 1e-18
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 25 NRDLRSHAWYHGAIPRSRAEEIIENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
+ L WYHGAIPR+ E++ + GDFL+R+ + YVLS + HF+I +
Sbjct: 7 QKPLHEQLWYHGAIPRAEVAELLVHSGDFLVRE-SQGKQEYVLSVLWDGLPRHFIIQSL- 64
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
D +Y + E + F ++P LI
Sbjct: 65 ---DNLY-----RLEGEGFPSIPLLIDHL 85
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A
2eyw_A
Length = 230
Score = 78.8 bits (193), Expect = 2e-18
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV- 83
+WY G + R A +++ G FL+RD ++ PG+YVLS ++ H++IN
Sbjct: 9 SEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSG 68
Query: 84 --------VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
QP + + D FD++P L+ FY
Sbjct: 69 PRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFY 106
>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 119
Score = 75.4 bits (186), Expect = 4e-18
Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 11/89 (12%)
Query: 28 LRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
W+HG I + A ++ FL+R + PG+Y L + F I
Sbjct: 13 HEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPT- 71
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
QF ++++ D+I Y
Sbjct: 72 -------PNNQFMMGGRYYNSIGDIIDHY 93
>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 119
Score = 74.7 bits (184), Expect = 7e-18
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
W+HGAI R AE ++E+ G FLIR S G Y LS +++ HF++
Sbjct: 12 QDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKL-- 68
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
D + E ++ L+TF+
Sbjct: 69 -LDDGTF---MIPGEKVAHTSLDALVTFH 93
>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor,
growth regulation, signal transduction, SH2 domain,
nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1
d.93.1.1
Length = 187
Score = 76.1 bits (187), Expect = 9e-18
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Query: 24 DNRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVIN 81
D + ++ Y G + + AE ++E EG FL+RD + + +S ++ LH I
Sbjct: 27 DLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIE 86
Query: 82 KVVIQPDTVYERVQFQFEDDLFDTVPDLITFYV 114
Q + + + L+ Y
Sbjct: 87 ----QWNHNFSFDAHDPCVFHSPDITGLLEHYK 115
>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 119
Score = 74.2 bits (183), Expect = 9e-18
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 31 HAWYHGAIPRSRAEEIIENE---GDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQP 87
W HG I RS+AEE++ G FL+R S Y L + + + I +
Sbjct: 10 PCWNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPN--ED 67
Query: 88 DTVYERVQFQFEDDLFDTVPDLITFY 113
D + F + LI FY
Sbjct: 68 DKFTVQASEGVSMRFFTKLDQLIEFY 93
>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced,
ATP-binding, cell membrane, cytoplasm, membrane,
nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens}
PDB: 3eac_A
Length = 106
Score = 73.0 bits (180), Expect = 2e-17
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVI---- 80
L W+HG I R +AE ++ G FL+R+ T+ PG+Y L S + H+ I
Sbjct: 4 KLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHA 63
Query: 81 NKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+K+ I + F+ + L+ Y
Sbjct: 64 SKLSIDEEV------------YFENLMQLVEHY 84
>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 73.1 bits (180), Expect = 2e-17
Identities = 15/89 (16%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
D ++ W+ G + R + + ++++ G +LIR+ ++ + +S + H + +
Sbjct: 12 DYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEK- 70
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ E FD++ +L+ +Y
Sbjct: 71 -------DNWIHITEAKKFDSLLELVEYY 92
>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal
transduction lymphocyte, signaling protein; HET: PTR;
2.15A {Mus musculus} SCOP: d.93.1.1
Length = 103
Score = 72.7 bits (179), Expect = 2e-17
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 33 WYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPDT 89
+YHG + + E ++ +G+FLIRD S PG L K + I + +
Sbjct: 5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFRE--KHGY 62
Query: 90 VYERVQFQFEDDLFDTVPDLITFY 113
+F + +L++ Y
Sbjct: 63 YRIETDAHTPRTIFPNLQELVSKY 86
>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain,
signaling protein, structural genomics, joint CE
structural genomics, JCSG; 1.50A {Homo sapiens} PDB:
1jwo_A
Length = 98
Score = 72.2 bits (178), Expect = 3e-17
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Query: 28 LRSHAWYHGAIPRSRAEEIIENEGD--FLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
L W+HG I A + ++ D FL+R+ PG+YVL +H+ +
Sbjct: 2 LSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHR-- 59
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ E F + D++ Y
Sbjct: 60 ------DGHLTIDEAVFFCNLMDMVEHY 81
>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET:
PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A*
1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L*
1cwe_A*
Length = 105
Score = 72.3 bits (178), Expect = 4e-17
Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Query: 28 LRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
L W+ + R AE + G FLIR+ S G++ LS Q V+
Sbjct: 1 LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHY 60
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I+ + F + +L+ Y
Sbjct: 61 KIRNLD--NGGFYISPRITFPGLHELVRHY 88
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A
2l3q_A 2ggr_A
Length = 304
Score = 76.2 bits (186), Expect = 5e-17
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
+WY G + R A +++ G FL+RD ++ PG+YVLS ++ H++IN
Sbjct: 7 SEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSG 66
Query: 85 ---------IQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDT 120
QP + + D FD++P L+ FY + DT
Sbjct: 67 PRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDT 111
>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1,
solution structure, cell junctio membrane, hydrolase,
membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A
Length = 131
Score = 72.2 bits (177), Expect = 8e-17
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 12/98 (12%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
S WY + R +A ++++ G FLIRD S G Y L+ T K
Sbjct: 17 DTSKFWYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDP 76
Query: 86 QPDTVY--------ERVQFQFEDD--LFDTVPDLITFY 113
V + V+ + F ++ L++ +
Sbjct: 77 VEQLVRHFLIETGPKGVKIKGCPSEPYFGSLSALVSQH 114
>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction,
peptide complex, complex (proto-oncogene/early protein);
HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*
Length = 106
Score = 71.5 bits (176), Expect = 8e-17
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Query: 28 LRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVIN-- 81
+++ WY G + R AE + G FLIR+ + G Y LS +
Sbjct: 2 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHY 61
Query: 82 KVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
K+ + Y + F+T+ L+ Y
Sbjct: 62 KIRKLDNGGY----YITTRAQFETLQQLVQHY 89
>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide
complex, cytokine regulator; HET: PTR; 2.00A {Mus
musculus}
Length = 152
Score = 72.7 bits (178), Expect = 1e-16
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 21 LSLDNRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHF 78
+ R L+ +Y A+ A ++ G FLIRD + Q + LS +++ +
Sbjct: 24 VVNAVRKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNL 83
Query: 79 VI----NKVVIQPDTVYERVQFQFEDDLFDTVPDLITFYV 114
I +Q D + + FD V L+ Y+
Sbjct: 84 RIQXEGGSFSLQSDPRSTQPVPR-----FDXVLKLVHHYM 118
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 76.0 bits (187), Expect = 1e-16
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
L H+WYHG + R+ AE ++ + G FL+R+ S PG +S + + H+ IN
Sbjct: 102 LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASD 161
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
V +F T+ +L+ +
Sbjct: 162 GKLYVSSESRFN-------TLAELVHHH 182
>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS
proline, domain swapped dimer, SH transferase; HET: CIT;
2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A
1lum_A 1lun_A 2k79_B 2k7a_B
Length = 118
Score = 71.2 bits (175), Expect = 1e-16
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 28 LRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
L ++ WY+ +I R +AE+++ EG F++RD + PG Y +S +K K
Sbjct: 6 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHY 64
Query: 85 -IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I+ + + E +FD++P LI ++
Sbjct: 65 HIKETNDSPKRYYVAEKYVFDSIPLLIQYH 94
>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell
adapter containing SH2 domain protein; NMR {Mus
musculus}
Length = 141
Score = 71.8 bits (176), Expect = 1e-16
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGN--YVLSCMSKTQYLHFVIN 81
+L WY GA R AEE + +G FLIR + Y L + + +
Sbjct: 19 ELLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVR 78
Query: 82 KVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I+ Y + + ++ F +V +++ +
Sbjct: 79 F--IEATKQYALGKKKNGEEYFGSVVEIVNSH 108
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6
(PTK6/BRK), SRC homology 2(S domain, solution structure,
backbone dynamics, transferase; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 100
Score = 70.7 bits (174), Expect = 2e-16
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 21/93 (22%)
Query: 30 SHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVI----- 80
S W+ G I RS A + G FLIR +YVLS H+ I
Sbjct: 1 SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAG 60
Query: 81 NKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
++ + F ++P+L+ ++
Sbjct: 61 GRLHLNEAVS------------FLSLPELVNYH 81
>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit;
transferase, polymorphism, UBL conjugation,
phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo
sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A
1oo4_A* 2pna_A 2pnb_A
Length = 120
Score = 70.8 bits (174), Expect = 2e-16
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 25 NRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDC-TSQPGNYVLSCMSKTQYLHFVIN 81
N L++ WY G I R E + + +G FL+RD T G+Y L+ I
Sbjct: 5 NMSLQNAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKI- 63
Query: 82 KVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
D Y + F +V +LI Y
Sbjct: 64 ---FHRDGKY----GFSDPLTFSSVVELINHY 88
>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex
(phosphotransferase/receptor), phosphotransferase, SH2
domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1
PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A
Length = 112
Score = 70.0 bits (172), Expect = 3e-16
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
W G+ R++AE ++ +G FL+R+ +S+ G Y S + + H VINK
Sbjct: 6 HHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRE-SSKQGCYACSVVVDGEVKHCVINK-- 62
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
F +L+ ++ +L+ Y
Sbjct: 63 -----TATGYGFAEPYNLYSSLKELVLHY 86
>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; 2.50A {Mus musculus}
Length = 138
Score = 69.9 bits (171), Expect = 6e-16
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 28 LRSHAWYHGAIP-RSRAEEIIEN--------EGDFLIRDCTSQPGNYVLSCMSKTQYLHF 78
W+H + R+ AE++++ +G FL+R+ + P +Y LS + H
Sbjct: 19 HFGEKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHC 78
Query: 79 VINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I + Y + ++ F+++ LI Y
Sbjct: 79 RIRSTMENGVMKY----YLTDNLTFNSIYALIQHY 109
>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase;
NMR {Homo sapiens}
Length = 125
Score = 69.3 bits (170), Expect = 7e-16
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 28 LRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYL------HF 78
+ + WY + RS+AE++++ EG F++RD S+ G Y +S +K+ H+
Sbjct: 8 IEMYEWYSKHMTRSQAEQLLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHY 66
Query: 79 VINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
V+ P + Y + E LF T+P+LI ++
Sbjct: 67 VVCST---PQSQY----YLAEKHLFSTIPELINYH 94
>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70,
tyrosine kinase, transferase; HET: PTR; 1.90A {Homo
sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A
Length = 254
Score = 71.9 bits (176), Expect = 1e-15
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 30 SHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
+++G+I R+ AEE + +G FL+R C G YVLS + ++ HF I +
Sbjct: 5 HLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIER--- 61
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
Q + Y +L FY
Sbjct: 62 QLNGTY----AIAGGKAHCGPAELCEFY 85
Score = 62.6 bits (152), Expect = 2e-12
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 19 WELSLDNRDLRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQ 74
E + WYH ++ R AE + + +G FL+R G Y LS +
Sbjct: 147 VEKLIATTAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKT 205
Query: 75 YLHFVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
H++I++ + E + FDT+ L+ +
Sbjct: 206 VYHYLISQDKAGKYCIPEGTK-------FDTLWQLVEYL 237
>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 110
Score = 68.4 bits (168), Expect = 1e-15
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 28 LRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYL------HF 78
L + W+ G I RS++E+++ EG F++R+ SQ G Y +S SK H+
Sbjct: 8 LDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHY 66
Query: 79 VINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
++ + + E+ FD++P LI ++
Sbjct: 67 HVHT---NAENKL----YLAENYCFDSIPKLIHYH 94
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 72.7 bits (178), Expect = 2e-15
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
+++G+I R+ AEE ++ +G FL+R C G YVLS + ++ HF I +
Sbjct: 5 AAHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIER- 63
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
Q + Y +L FY
Sbjct: 64 --QLNGTY----AIAGGKAHCGPAELCEFY 87
Score = 58.8 bits (142), Expect = 1e-10
Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 12/159 (7%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
WYH ++ R AE + + +G FL+R G Y LS + H++I++
Sbjct: 158 HERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQD 216
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQFEDDLFDTVPDLITF 143
+ E +F T+ L+ + + +Y + +
Sbjct: 217 KAGKYCIPEGTKFD-------TLWQLVEYLKLKADGLIYCLKEACPNSSASNASGAAAPT 269
Query: 144 YVGSGKPISSLSGAKIKSPKNRYSCDILVVSNAKQSKSL 182
++ + Y+ + +++ + + +
Sbjct: 270 LPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPM 308
>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain;
HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1
PDB: 1csy_A* 1csz_A*
Length = 254
Score = 70.7 bits (173), Expect = 3e-15
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 11/90 (12%)
Query: 28 LRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
++ G I R AE+ + ++G +L+R + G + LS + H+ I +
Sbjct: 2 ANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIER- 60
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + Y + DL ++
Sbjct: 61 --ELNGTY----AIAGGRTHASPADLCHYH 84
Score = 64.2 bits (156), Expect = 7e-13
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 12/99 (12%)
Query: 19 WELSLDNRDLRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQ 74
E + W+HG I R +E+I+ + G FLIR + G+Y L + + +
Sbjct: 146 LEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHEGK 204
Query: 75 YLHFVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
LH+ I+K E FDT+ L+ Y
Sbjct: 205 VLHYRIDK---DKTGKL----SIPEGKKFDTLWQLVEHY 236
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5-
triphosphate, wortmannin, H1047R, ATP-binding, disease
mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB:
3hiz_B 2rd0_B 4a55_B* 3mtt_A
Length = 373
Score = 71.0 bits (173), Expect = 6e-15
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query: 24 DNRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDC-TSQPGNYVLSCMSKTQYLHFVI 80
+N L++ WY G I R E + + +G FL+RD T G+Y L+ I
Sbjct: 3 NNMSLQNAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKI 62
Query: 81 NKVVIQPDTVYERVQFQFEDDL-FDTVPDLITFY 113
+ ++ F D L F +V +LI Y
Sbjct: 63 ---------FHRDGKYGFSDPLTFSSVVELINHY 87
Score = 59.1 bits (142), Expect = 7e-11
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 19 WELSLDNRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYL 76
E D W G+ R++AE ++ +G FL+R+ +S+ G Y S + +
Sbjct: 289 VEDDEDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRE-SSKQGCYACSVVVDGEVK 347
Query: 77 HFVINKVVIQPDTVYERVQFQFEDDLFDTVPDL 109
H VIN + T Y F +L+ ++ +L
Sbjct: 348 HCVIN----KTATGY---GFAEPYNLYSSLKEL 373
>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 125
Score = 66.9 bits (164), Expect = 6e-15
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGNYVLSCMSKTQYL------HF 78
L + WYH I R++AE ++ EG F++RD G+Y +S + H+
Sbjct: 13 LEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDS-RHLGSYTISVFMGARRSTEAAIKHY 71
Query: 79 VINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I K + + E F ++P+LI ++
Sbjct: 72 QIKK---NDSGQW----YVAERHAFQSIPELIWYH 99
>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase,
phosphotransferase, phosphorylation; NMR {Mus musculus}
SCOP: d.93.1.1 PDB: 1blk_A
Length = 114
Score = 66.2 bits (162), Expect = 8e-15
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVIN-K 82
L W+ I R AE + G FLIR+ S G + LS T V + K
Sbjct: 9 LEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYK 68
Query: 83 VVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + Y + F T+ L+ Y
Sbjct: 69 IRSLDNGGY----YISPRITFPTLQALVQHY 95
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 68.5 bits (168), Expect = 4e-14
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 25 NRDLRSHAWYHGAIPRSRAEEII--ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINK 82
L W+HG I R +AE ++ G FL+R+ T+ PG+Y L + + H+ I
Sbjct: 74 GTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMY 133
Query: 83 VVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ E+ F+ + L+ Y
Sbjct: 134 ---HASKLSI-----DEEVYFENLMQLVEHY 156
>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2;
SH2, phosphoinositide phospholipase C, PLC-gamma-2,
phospholipase C-gamma-2; NMR {Rattus norvegicus}
Length = 124
Score = 65.0 bits (159), Expect = 4e-14
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 27 DLRSHAWYHGAIPRSRAEEII---ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
S WY+ + R AE+++ +G FLIR +Y ++ ++ + H IN+
Sbjct: 15 PHESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREG-TDSYAITFRARGKVKHCRINRD 73
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
R F+++ +L+++Y
Sbjct: 74 --------GRHFVLGTSAYFESLVELVSYY 95
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase,
phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus
musculus}
Length = 302
Score = 66.6 bits (162), Expect = 1e-13
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
WY G I R++AEE++ +G FLIR+ SQ G Y S + H VI +
Sbjct: 191 HEERTWYVGKINRTQAEEMLSGKRDGTFLIRES-SQRGCYACSVVVDGDTKHCVIYR--- 246
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
F +L+ ++ +L+ Y
Sbjct: 247 TATGFG----FAEPYNLYGSLKELVLHY 270
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 67.0 bits (164), Expect = 2e-13
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIENEGD----FLIRDCTSQPGNYVLSCMSKT-----QYL 76
L + W+ I R AE + G+ F+IRD + G+Y LS
Sbjct: 65 DSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVK 124
Query: 77 HFVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
H+ I + + + F T+ +L+ Y
Sbjct: 125 HYKIRT---LDNGGF----YISPRSTFSTLQELVDHY 154
>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition,
tandem SH2 domains, A analog, ATP-binding,
craniosynostosis, disease mutation; HET: PTR DVT ACP;
2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A*
Length = 226
Score = 65.3 bits (159), Expect = 2e-13
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 31 HAWYHGAIPRSRAEEI---IENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQP 87
WYH ++ R++AE + + +G FL+R ++P +Y +S ++ + H + +
Sbjct: 122 KEWYHASLTRAQAEHMLMRVPRDGAFLVRK-RNEPNSYAISFRAEGKIKHCRVQQ----- 175
Query: 88 DTVYERVQFQFEDDLFDTVPDLITFY 113
E + FD++ DLI++Y
Sbjct: 176 ----EGQTVMLGNSEFDSLVDLISYY 197
Score = 64.9 bits (158), Expect = 3e-13
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 17/113 (15%)
Query: 30 SHAWYHGAI-----PRSRAEEIIENE--------GDFLIRDCTSQPGNYVLSCMSKTQYL 76
S W+HG + R AE ++ G FL+R+ + G+Y LS +
Sbjct: 3 SEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQ 62
Query: 77 HFVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQF 129
H I+ F ++ +FD++ DLIT Y + ++
Sbjct: 63 HCRIHSR----QDAGTPKFFLTDNLVFDSLYDLITHYQQVPLRCNEFEMRLSE 111
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 64.3 bits (155), Expect = 9e-13
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
AWY G + R A+ ++ G FL+RD ++ PG+YVLS ++ H++IN +
Sbjct: 8 SSDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSL- 66
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+F+ D FD +P L+ FY
Sbjct: 67 -------PNRRFKIGDQEFDHLPALLEFY 88
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 63.7 bits (155), Expect = 2e-12
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 16/96 (16%)
Query: 27 DLRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLS-----CMSKTQYLH 77
+++ WY G I R +E ++ G FL+R+ + G Y LS H
Sbjct: 144 SIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKH 203
Query: 78 FVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ I K+ + R Q F+++ L+ +Y
Sbjct: 204 YKIRKLDSGGFYITSRTQ-------FNSLQQLVAYY 232
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 61.7 bits (150), Expect = 1e-11
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 27 DLRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLS-----CMSKTQYLH 77
+++ WY G I R +E ++ G FL+R+ + G Y LS H
Sbjct: 61 SIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKH 120
Query: 78 FVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ I K+ + + F+++ L+ +Y
Sbjct: 121 YKIRKL---DSGGF----YITSRTQFNSLQQLVAYY 149
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 53.7 bits (128), Expect = 5e-09
Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 9/112 (8%)
Query: 28 LRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYL---HFVI 80
++Y + R A +++ + G FL+RD +S+PG Y L+ + H++I
Sbjct: 38 FEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRD-SSRPGEYSLTVREADEGNAVCHYLI 96
Query: 81 NKVVIQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQFEDD 132
+ + D + + F +P L+ + + ++
Sbjct: 97 ERGEPKEDGTAAA-GVKIANQSFPDIPALLNHFKMRVLTEASLLAAYKKPII 147
>3maz_A Signal-transducing adaptor protein 1; modular domain,
phosphotyrosine, specificity, cytoplasm, phosphoprotein,
SH2 domain, signaling protein; HET: PTR; 1.90A {Homo
sapiens}
Length = 125
Score = 51.4 bits (123), Expect = 5e-09
Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 13/93 (13%)
Query: 28 LRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYL---HFVIN 81
L + R A E+++ + G+ ++R S NY ++ + H+ +
Sbjct: 12 LNPMPACFYTVSRKEATEMLQKNPSLGNMILRPG-SDSRNYSITIRQEIDIPRIKHYKVM 70
Query: 82 KVVIQPDTVYERVQFQFEDDLFDTVPDLITFYV 114
V Y + + +I ++V
Sbjct: 71 SV----GQNY--TIELEKPVTLPNLFSVIDYFV 97
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 48.7 bits (116), Expect = 3e-07
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
++S W+H I AE ++ +G FL R S PG+ LS H I
Sbjct: 1 MKSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTG 60
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFYV 114
D + + F T+ +L+ +Y+
Sbjct: 61 DYYDL--------YGGEKFATLAELVQYYM 82
Score = 41.0 bits (96), Expect = 1e-04
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 23 LDNRDLRSHAWYHGAIPRSRAEEIIENEGD---FLIRDCTSQPGNYVLS 68
L+ D S W+HG + AE+++ +G FL+R+ S PG++VLS
Sbjct: 102 LNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLS 150
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 47.0 bits (111), Expect = 4e-07
Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 18 EWELSLDNRDLRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKT 73
+ L W+ + R AE + G FLIR+ S G++ LS
Sbjct: 61 PFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFD 120
Query: 74 QYLHFVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
Q V+ I+ + F + +L+ Y
Sbjct: 121 QNQGEVVKHYKIRNLD--NGGFYISPRITFPGLHELVRHY 158
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 46.3 bits (109), Expect = 6e-07
Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 9/108 (8%)
Query: 30 SHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSK---TQYLHFVINK 82
++Y + R A +++ + G FL+RD +S+PG Y L+ H++I +
Sbjct: 11 WRSFYFPGMSREEAHKLLGEPQVSIGTFLMRD-SSRPGEYSLTVREADEGNAVCHYLIER 69
Query: 83 VVIQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQFE 130
+ + + F +P L+ + + ++
Sbjct: 70 GE-PKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEASLLAAYKKP 116
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 46.6 bits (110), Expect = 9e-07
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 30 SHAWYHGAIPRSRAEEII---ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQ 86
H W+ G IPR++AEE++ ++G FLIR+ S PG++ LS HF + +
Sbjct: 57 PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRD--- 113
Query: 87 PDTVYERVQFQFEDDLFDTVPDLITFY 113
++ F+++ +L+ ++
Sbjct: 114 -----GAGKYFLWVVKFNSLNELVDYH 135
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 46.8 bits (111), Expect = 1e-06
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 33 WYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPDT 89
W+H + AE +++ G FL R G++ LS Q H + IQ
Sbjct: 4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTH-----IRIQNSG 58
Query: 90 VYERVQFQFEDDLFDTVPDLITFYV 114
+ + + + F T+ +L+ +Y
Sbjct: 59 DFYDL---YGGEKFATLTELVEYYT 80
Score = 36.8 bits (85), Expect = 0.003
Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 34/172 (19%)
Query: 33 WYHGAIPRSRAEEIIENE---GDFLIRDCTSQPGNYVLS---------CMSKTQYLHFVI 80
WYHG + +AE +++ + FL+R+ SQPG++VLS S + H +
Sbjct: 110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKV 169
Query: 81 NK--------VVIQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQFEDD 132
+ D++ + V+ + + + + V +
Sbjct: 170 MCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLE 229
Query: 133 LFDTVPDLITFYVGSGKPISSLSGAKIKS-------------PKNRYSCDIL 171
L T G + SL ++K+ KNRY +IL
Sbjct: 230 LNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYK-NIL 280
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 46.5 bits (110), Expect = 2e-06
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 33 WYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPDT 89
W+H + AE +++ G FL R G++ LS Q H + IQ
Sbjct: 4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTH-----IRIQNSG 58
Query: 90 VYERVQFQFEDDLFDTVPDLITFY 113
+ + + + F T+ +L+ +Y
Sbjct: 59 DFYDL---YGGEKFATLTELVEYY 79
Score = 33.8 bits (77), Expect = 0.031
Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 34/172 (19%)
Query: 33 WYHGAIPRSRAEEIIENE---GDFLIRDCTSQPGNYVLS---------CMSKTQYLHFVI 80
WYHG + +AE +++ + FL+R+ SQPG++VLS S + H +
Sbjct: 110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKV 169
Query: 81 NK--------VVIQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQFEDD 132
+ D++ + V+ + + + + V +
Sbjct: 170 MCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLE 229
Query: 133 LFDTVPDLITFYVGSGKPISSLSGAKIKS-------------PKNRYSCDIL 171
L T G + SL ++K+ KNRY +IL
Sbjct: 230 LNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYK-NIL 280
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC,
gtpas activation, metal-binding, phorbol-ester binding,
SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Length = 463
Score = 43.0 bits (101), Expect = 2e-05
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 34 YHGAIPRSRAEEIIEN-EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPDTVYE 92
+HG I R A++++ EG +LIR+ QPG Y L+ +Q +F +Y
Sbjct: 54 FHGMISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNF----------RLYY 103
Query: 93 RVQFQFEDDLFDTVPD-----LITFYV 114
+ + F+++ D LIT Y+
Sbjct: 104 DGKHFVGEKRFESIHDLVTDGLITLYI 130
>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine
binding domain, protein tyrosine kinase, signal
transduction, structural genomics; NMR {Homo sapiens}
Length = 118
Score = 38.2 bits (88), Expect = 3e-04
Identities = 11/100 (11%), Positives = 30/100 (30%), Gaps = 21/100 (21%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYL----HF 78
R + R A+ ++E G+ L+R ++ H+
Sbjct: 16 RRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHY 75
Query: 79 VINKV----VIQPDTVYERVQFQFEDDLFDTVPDLITFYV 114
+ + VI + + ++ ++ ++V
Sbjct: 76 KVKREGPKYVIDVEQPFS----------CTSLDAVVNYFV 105
>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 126
Score = 33.6 bits (76), Expect = 0.013
Identities = 12/94 (12%), Positives = 35/94 (37%), Gaps = 15/94 (15%)
Query: 28 LRSHAWYHGAIPRSRAEEIIENE--------GDFLIRDCTSQPGNYVLSCMSKTQYLHFV 79
++ + E + + G + IR+ +++ G + + + + V
Sbjct: 14 PLPNSVFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVL---VVWDETSNKV 70
Query: 80 INKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
N + + D+ + + + LF +V ++ Y
Sbjct: 71 RNYRIFEKDSKF----YLEGEVLFVSVGSMVEHY 100
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched
library, clone:9530076O17...; SH3_1 domain; NMR {Mus
musculus}
Length = 109
Score = 31.7 bits (72), Expect = 0.044
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 26 RDLRSHAWYHGAIPRSRAEEI 46
+++ WY G + R AE
Sbjct: 85 DSIQAEEWYFGKMGRKDAESG 105
>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal
transduction, transducer, transcription factor; HET:
PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1
b.2.5.5 d.93.1.1 PDB: 1uus_A*
Length = 473
Score = 32.6 bits (73), Expect = 0.076
Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 9/100 (9%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIENE--GDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
L +G + R + ++N+ G F+IR PG + ++ + V
Sbjct: 346 STLWQEGIIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLV 405
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYE 123
QP+ + D + + F ++Q
Sbjct: 406 --QPNDTAAAKK-----TFPDFLSEHSQFVNLLQWTKDTN 438
>1xiw_B T-cell surface glycoprotein CD3 delta chain; CD3-epsilon,
CD3-delta, UCHT1-SCFV, immunoglobulin fold,
antibody-antigen complex; 1.90A {Homo sapiens} SCOP:
b.1.1.4
Length = 79
Score = 29.9 bits (67), Expect = 0.13
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 156 GAKIKSPKNRYSCDILVVSNAKQSKSLSNIRMCINC 191
G +I P+ Y C+ + K+S + RMC +C
Sbjct: 40 GKRILDPRGIYRCNGTDIYKDKESTVQVHYRMCQSC 75
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 30.0 bits (67), Expect = 0.53
Identities = 31/163 (19%), Positives = 52/163 (31%), Gaps = 72/163 (44%)
Query: 73 TQYLHFVINKVVIQPDTVYERVQF------QFEDD-LFDT-------------------V 106
++L +V + V +P V + Q +FE+ L
Sbjct: 62 GKFLGYVSSLV--EPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKT 119
Query: 107 PDLITFY-----VVIQPDT-----------------VYERVQF--Q------FED--DLF 134
+LI Y + +P + F Q FE+ DL+
Sbjct: 120 KELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLV--AIFGGQGNTDDYFEELRDLY 177
Query: 135 DT----VPDLITFYVGSGKPISSLSGAKIKSPKNRYS--CDIL 171
T V DLI F S + +S L + + K ++ +IL
Sbjct: 178 QTYHVLVGDLIKF---SAETLSELIRTTLDAEK-VFTQGLNIL 216
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein
prenylation, metal-binding, prenyltransferase, zinc,
phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A*
3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A*
3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A*
Length = 331
Score = 29.0 bits (64), Expect = 0.88
Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 10/89 (11%)
Query: 14 KKALEWELSLDNRDLRS-----HAWYHGAIPRSRAEEIIENEGDFLIRDCTSQPGNYVLS 68
+ EL L R L + H W + ++A E F T NY S
Sbjct: 123 EPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY--S 180
Query: 69 CMSKTQYLHFVINKVVIQPDTVYERVQFQ 97
Y ++ ++ QPD+ + +
Sbjct: 181 SWH---YRSCLLPQLHPQPDSGPQGRLPE 206
>2azj_A Geranylgeranyl pyrophosphate synthetase; hexpps,
trans-prenyltransferase; 2.40A {Sulfolobus solfataricus}
PDB: 2azk_A
Length = 289
Score = 27.7 bits (62), Expect = 2.3
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 127 FQFEDDLFDTVPDLITFYVGSGKPI 151
+Q DD D + GS K +
Sbjct: 204 YQVIDDFVDYKTKKVEEIDGSAKQL 228
>1gku_B Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea,
helicase; 2.7A {Archaeoglobus fulgidus} SCOP: c.37.1.16
c.37.1.16 e.10.1.1 PDB: 1gl9_B*
Length = 1054
Score = 28.1 bits (63), Expect = 2.4
Identities = 11/48 (22%), Positives = 20/48 (41%)
Query: 14 KKALEWELSLDNRDLRSHAWYHGAIPRSRAEEIIENEGDFLIRDCTSQ 61
+ ++ +YHG IP+ E ++N +F I T+Q
Sbjct: 117 ETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQ 164
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A
{Antonospora locustae}
Length = 178
Score = 26.4 bits (58), Expect = 4.8
Identities = 7/90 (7%), Positives = 27/90 (30%), Gaps = 13/90 (14%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIENEGD--FLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
+ +++HA Y + + + + PG + + + ++ +
Sbjct: 96 KSIKAHAKYFNSPEDAEKLLSSFDGSKVVYAFYFSRKYPGKLTFAYNNGS-----ILEEY 150
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ D + + F + + +
Sbjct: 151 IGVSD------MLTYNNSTFKDIDSFVAYR 174
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST
genomics, protein structure initiative; HET: PLP; 2.00A
{Rhodobacter sphaeroides 2}
Length = 476
Score = 26.8 bits (60), Expect = 5.5
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 22/67 (32%)
Query: 100 DDLFDTVPDLITF-------YV----VIQPDTVYERVQFQFEDDLFDTVPDLITFYVG-- 146
+ +F VPD+ITF YV + + V + F G
Sbjct: 277 EKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVL--------ARISGENAKGSWFTNGYT 328
Query: 147 -SGKPIS 152
S +P++
Sbjct: 329 YSNQPVA 335
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase;
HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP:
c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A*
1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A*
1d7r_A* 1d7v_A* 1z3z_A*
Length = 433
Score = 26.7 bits (60), Expect = 5.5
Identities = 6/21 (28%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Query: 134 FDTVPDLITF--YVGSGKPIS 152
PD++T +G+G P++
Sbjct: 261 DGVTPDILTLSKTLGAGLPLA 281
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.137 0.415
Gapped
Lambda K H
0.267 0.0533 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,040,057
Number of extensions: 181723
Number of successful extensions: 629
Number of sequences better than 10.0: 1
Number of HSP's gapped: 479
Number of HSP's successfully gapped: 113
Length of query: 192
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 104
Effective length of database: 4,244,745
Effective search space: 441453480
Effective search space used: 441453480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.0 bits)