RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5180
(192 letters)
>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 89.2 bits (221), Expect = 4e-24
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQ 86
LR W+HG + R AE +++ GDFL+R+ T+ PG YVL+ + Q H ++
Sbjct: 3 QLRGEPWFHGKLSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLL------ 56
Query: 87 PDTVYERVQFQFEDDLFDTVPDLITFY 113
V + +D F++V LI+++
Sbjct: 57 ---VDPEGVVRTKDHRFESVSHLISYH 80
>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 79.2 bits (195), Expect = 3e-20
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 22 SLDNRDLRSHAWYHGAIPRSRAEEIIENEG----DFLIRDCTSQPGNYVLSCMSKTQYLH 77
SL R+ W+HG I R ++ +I +G FL+R+ P +VLS + H
Sbjct: 1 SLSAAIHRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKH 60
Query: 78 FVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
++I + F + L+ F+
Sbjct: 61 YLILP---SEEEGRLYFSMDDGQTRFTDLLQLVEFH 93
>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 97
Score = 78.0 bits (192), Expect = 7e-20
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
D+ W+H + R +AE ++ G F+IR S PG++ +S + HF + +
Sbjct: 2 DIEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMR-- 59
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + + F ++ L+ +Y
Sbjct: 60 ------DTKGNYFLWTEKFPSLNKLVDYY 82
>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10,
GRB10 {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 78.1 bits (192), Expect = 7e-20
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 29 RSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
R+ W+HG I R + II+ +G FL+RD S P +VL+ + +F I
Sbjct: 3 RTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPC- 61
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
D + F + L+ FY
Sbjct: 62 --EDDGQTFFSLDDGNTKFSDLIQLVDFY 88
>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2,
SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 78.1 bits (192), Expect = 8e-20
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIENEGD--FLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
R+L WY G++ + A+E ++ + FLIRD + +S + + I
Sbjct: 10 RELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQ 69
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFYV 114
+ + + + + FD+V LI +YV
Sbjct: 70 DGKF-RLDSIICVKSKLKQFDSVVHLIDYYV 99
>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 86
Score = 77.3 bits (190), Expect = 1e-19
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 27 DLRSHAWYHGAIPRSRAEEIIEN-----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVIN 81
+L + W+HG + R +A +++ G F+IR ++PG VL+ + + H ++
Sbjct: 1 ELSDYPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLS 60
Query: 82 KVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
Q + F +V D++ +
Sbjct: 61 L---NGHG-----QCHVQHLWFQSVFDMLRHF 84
>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 77.0 bits (189), Expect = 2e-19
Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Query: 28 LRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
L W+ + R AE + G FLIR+ S G++ LS Q V+
Sbjct: 1 LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHY 60
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I+ + F + +L+ Y
Sbjct: 61 KIRNL--DNGGFYISPRITFPGLHELVRHY 88
>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens)
[TaxId: 9606]}
Length = 109
Score = 76.0 bits (186), Expect = 7e-19
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 33 WYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV------ 84
WY G + R A +++ G FL+RD ++ PG+YVLS ++ H++IN
Sbjct: 2 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 61
Query: 85 ---IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
QP + + D FD++P L+ FY
Sbjct: 62 PSPAQPPPGVSPSRLRIGDQEFDSLPALLEFY 93
>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 74.7 bits (183), Expect = 2e-18
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 28 LRSHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVV 84
+ + A YHG I R E+++ +G +L+RD S PG Y L + + +++
Sbjct: 1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQ-- 58
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + F + +LI+ +
Sbjct: 59 TETGSWSAETAPGVHKRYFRKIKNLISAF 87
>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 74.2 bits (182), Expect = 2e-18
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 30 SHAWYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQ 86
S AW+ G IPR++AEE++ ++G FLIR+ S PG++ LS HF + +
Sbjct: 2 SMAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRD--- 58
Query: 87 PDTVYERVQFQFEDDLFDTVPDLITFY 113
++ F+++ +L+ ++
Sbjct: 59 -----GAGKYFLWVVKFNSLNELVDYH 80
>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 109
Score = 72.7 bits (178), Expect = 1e-17
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 29 RSHAWYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
+S W+H I AE ++ +G FL R S PG+ LS H I
Sbjct: 1 KSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNT-- 58
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + F T+ +L+ +Y
Sbjct: 59 ------GDYYDLYGGEKFATLAELVQYY 80
>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 108
Score = 72.5 bits (177), Expect = 1e-17
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 33 WYHGAIPRSRAEEIIE---NEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPDT 89
W+HG + AE+++ G FL+R+ S PG++VLS + K +
Sbjct: 2 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVM 61
Query: 90 VYERV--QFQFEDDLFDTVPDLITFY 113
+ + + FD++ DL+ Y
Sbjct: 62 IRCQELKYDVGGGERFDSLTDLVEHY 87
>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 101
Score = 71.6 bits (175), Expect = 2e-17
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
L H+WYHG + R+ AE ++ + G FL+R+ S PG +S + + H+ IN
Sbjct: 2 LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRIN---- 57
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
T + + + F+T+ +L+ +
Sbjct: 58 ---TASDGKLYVSSESRFNTLAELVHHH 82
>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4,
SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}
Length = 112
Score = 71.2 bits (174), Expect = 4e-17
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
+ ++ Y G + + AE ++E EG FL+RD + + +S ++ LH I
Sbjct: 6 LQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIE-- 63
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
Q + + + L+ Y
Sbjct: 64 --QWNHNFSFDAHDPCVFHSPDITGLLEHY 91
>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 106
Score = 70.1 bits (171), Expect = 1e-16
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
+++ WY G I R +E ++ N G FL+R+ + G Y LS +
Sbjct: 2 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHY 61
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I+ + F+++ L+ +Y
Sbjct: 62 KIRKL--DSGGFYITSRTQFNSLQQLVAYY 89
>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 111
Score = 69.7 bits (170), Expect = 2e-16
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Query: 24 DNRDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDC-TSQPGNYVLSCMSKTQYLHFVI 80
+N L+ WY G I R E + + +G FL+RD T G+Y L+ I
Sbjct: 4 NNMSLQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKI 63
Query: 81 NKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ + F++V +LI Y
Sbjct: 64 FHR--------DGKYGFSDPLTFNSVVELINHY 88
>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 103
Score = 68.9 bits (168), Expect = 3e-16
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 33 WYHGAIPRSRAEEII---ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPDT 89
+YHG + + E ++ +G+FLIRD S PG L K + I + +
Sbjct: 5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFRE--KHGY 62
Query: 90 VYERVQFQFEDDLFDTVPDLITFY 113
+F + +L++ Y
Sbjct: 63 YRIETDAHTPRTIFPNLQELVSKY 86
>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 114
Score = 69.0 bits (168), Expect = 4e-16
Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
L W+ I R AE + G FLIR+ S G + LS T V +
Sbjct: 9 LEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYK 68
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ D + F T+ L+ Y
Sbjct: 69 IRSLD---NGGYYISPRITFPTLQALVQHY 95
>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor
kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}
Length = 100
Score = 68.1 bits (166), Expect = 4e-16
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 11/88 (12%)
Query: 30 SHAWYHGAIPRSRAEEIIENE----GDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
S W+ G I RS A ++ E G FLIR +YVLS H+ I +
Sbjct: 1 SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWR--- 57
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
E F ++P+L+ ++
Sbjct: 58 ----RAGGRLHLNEAVSFLSLPELVNYH 81
>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo
sapiens) [TaxId: 9606]}
Length = 104
Score = 67.8 bits (165), Expect = 6e-16
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 28 LRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
+++ WY G + R AE + G FLIR+ + G Y LS +
Sbjct: 3 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHY 62
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I+ + F+T+ L+ Y
Sbjct: 63 KIRKL--DNGGYYITTRAQFETLQQLVQHY 90
>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 67.8 bits (165), Expect = 7e-16
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Query: 33 WYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPD 88
W+ I R AE + G F+IRD + G+Y LS + I+
Sbjct: 3 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 62
Query: 89 TVYERVQFQFEDDLFDTVPDLITFY 113
+ F T+ +L+ Y
Sbjct: 63 --DNGGFYISPRSTFSTLQELVDHY 85
>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 66.6 bits (162), Expect = 2e-15
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
L W+HG I R +AE ++ G FL+R+ T+ PG+Y L + + H+ I
Sbjct: 1 LSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRI----- 55
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ E+ F+ + L+ Y
Sbjct: 56 ---MYHASKLSIDEEVYFENLMQLVEHY 80
>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 66.2 bits (161), Expect = 2e-15
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
L W+HG I A + ++ +G FL+R+ PG+YVL +H+ +
Sbjct: 1 LSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLH--- 57
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ E F + D++ Y
Sbjct: 58 -----RDGHLTIDEAVFFCNLMDMVEHY 80
>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 64.6 bits (157), Expect = 2e-14
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 33 WYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPD 88
+++G+I R+ AEE ++ +G FL+R C G YVLS + ++ HF I +
Sbjct: 8 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIER------ 61
Query: 89 TVYERVQFQFEDDLFDTVPDLITFY 113
+L FY
Sbjct: 62 -QLNGTYAIAGGKAHCGPAELCEFY 85
>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 108
Score = 63.9 bits (155), Expect = 2e-14
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 28 LRSHAWYHGAIPRSRAEEII---ENEGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINK-V 83
L ++ WY+ +I R +AE+++ EG F++RD + PG Y +S +K K
Sbjct: 3 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHY 61
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
I+ + + E +FD++P LI ++
Sbjct: 62 HIKETNDSPKRYYVAEKYVFDSIPLLIQYH 91
>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 105
Score = 63.5 bits (154), Expect = 3e-14
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 29 RSHAWYHGAIPRSRAEEIIEN---EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
S WYH ++ R++AE ++ +G FL+R Y +S ++ + H + +
Sbjct: 7 ESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNS-YAISFRAEGKIKHCRVQQ--- 62
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
E + FD++ DLI++Y
Sbjct: 63 ------EGQTVMLGNSEFDSLVDLISYY 84
>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 141
Score = 63.8 bits (155), Expect = 5e-14
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 23 LDNRDLRSHAWYHGAIPRSRAEEIIEN-EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVIN 81
++NR +HG I R +A+E++ EG +++R+ QPG Y L+ Q L++ +
Sbjct: 27 VENRPKYYGREFHGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRL- 85
Query: 82 KVVIQPDTVYERVQFQFEDDLFDTVPDLITFYVV 115
+ + + F+++ DL+T ++
Sbjct: 86 ---------FHDGKHFVGEKRFESIHDLVTDGLI 110
>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 129
Score = 63.9 bits (155), Expect = 5e-14
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 11/85 (12%)
Query: 33 WYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPD 88
++ G I R AE+ + +G +L+R + G + LS + H+ I +
Sbjct: 7 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIER------ 60
Query: 89 TVYERVQFQFEDDLFDTVPDLITFY 113
+ DL ++
Sbjct: 61 -ELNGTYAIAGGRTHASPADLCHYH 84
>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium
discoideum [TaxId: 44689]}
Length = 131
Score = 63.8 bits (155), Expect = 5e-14
Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 9/100 (9%)
Query: 26 RDLRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
L +G + R + ++N G F+IR PG + ++ +
Sbjct: 4 STLWQEGIIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYL- 62
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYE 123
+QP+ + D + + F ++Q
Sbjct: 63 -VQPND--TAAAKK---TFPDFLSEHSQFVNLLQWTKDTN 96
>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Cow (Bos taurus) [TaxId: 9913]}
Length = 107
Score = 63.1 bits (153), Expect = 5e-14
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVI 85
W G+ R++AE ++ +G FL+R+ +S+ G Y S + + H VINK
Sbjct: 6 HDEKTWNVGSSNRNKAENLLRGKRDGTFLVRE-SSKQGCYACSVVVDGEVKHCVINK--- 61
Query: 86 QPDTVYERVQFQFEDDLFDTVPDLITFY 113
F +L+ ++ +L+ Y
Sbjct: 62 ----TATGYGFAEPYNLYSSLKELVLHY 85
>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 60.9 bits (147), Expect = 5e-13
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 12/100 (12%)
Query: 18 EWELSLDNRDLRSHAWYHGAIPRSRAEEII----ENEGDFLIRDCTSQPGNYVLSCMSKT 73
+ E + W+HG I R +E+I+ + G FLIR + G+Y L + +
Sbjct: 16 QLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHEG 74
Query: 74 QYLHFVINKVVIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
+ LH+ + D E FDT+ L+ Y
Sbjct: 75 KVLHY-------RIDKDKTGKLSIPEGKKFDTLWQLVEHY 107
>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 59.7 bits (144), Expect = 1e-12
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN----EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKV 83
WYH ++ R AE + + +G FL+R G Y LS + H++I++
Sbjct: 26 HERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQ- 83
Query: 84 VIQPDTVYERVQFQFEDDLFDTVPDLITFY 113
E FDT+ L+ +
Sbjct: 84 ------DKAGKYCIPEGTKFDTLWQLVEYL 107
>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing
protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 59.3 bits (143), Expect = 1e-12
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 33 WYHGAIPRSRAEEIIEN--EGDFLIRDCTSQPGNYVLSCMSKTQYLHFVINKVVIQPDTV 90
W+HGAI R AE ++E+ G FLIR S G Y LS +++ HF V + D
Sbjct: 11 WFHGAISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHF---MVKLLDDGT 66
Query: 91 YERVQFQFEDDLFDTVPDLITFY 113
+ E ++ L+TF+
Sbjct: 67 F---MIPGEKVAHTSLDALVTFH 86
>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 141
Score = 58.0 bits (140), Expect = 9e-12
Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 13/99 (13%)
Query: 28 LRSHAWYHGAIPRSRAEEIIEN--EGDFLIRDC-TSQPGNYVLSCMSKTQYLHFVINKVV 84
L + + G I + R I+ G FL+R +S+ G + + K I V
Sbjct: 4 LWNEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSV- 62
Query: 85 IQPDTVYERVQFQFEDDLFDTVPDLITFYVVIQPDTVYE 123
+P T + + ++I Y ++ +
Sbjct: 63 -EPYT--------KQQLNNMSFAEIIMGYKIMDATNILV 92
>d2o3ia1 e.73.1.1 (A:2-390) Hypothetical protein CV3147
{Chromobacterium violaceum [TaxId: 536]}
Length = 389
Score = 28.8 bits (64), Expect = 0.37
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 13/74 (17%)
Query: 114 VVIQPDTVYERVQFQFE---------DDLFDTVPDLITFY-VGSGKPISS---LSGAKIK 160
VV++ V +Q E T PD I+++ G G+ + S LSG
Sbjct: 283 VVLEDGERRCTVLYQNESLLAWDSALSHPLATAPDAISYFVEGEGQHVFSNGDLSGNDHG 342
Query: 161 SPKNRYSCDILVVS 174
+ V++
Sbjct: 343 LDPSVRGRKAAVIA 356
Score = 26.1 bits (57), Expect = 2.8
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 9/44 (20%)
Query: 77 HFVINKVVIQPDTVYERVQFQFE---------DDLFDTVPDLIT 111
F + KVV++ V +Q E T PD I+
Sbjct: 277 GFDLGKVVLEDGERRCTVLYQNESLLAWDSALSHPLATAPDAIS 320
>d1p4ua_ b.1.10.2 (A:) ADP-ribosylation factor binding protein Gga3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 145
Score = 25.6 bits (56), Expect = 3.3
Identities = 9/50 (18%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 85 IQPDTVYE----RVQFQFEDDLFDTVPDLITFYVVIQPDTVYERVQFQFE 130
P T Y+ R+ F F + PD++ V + +
Sbjct: 18 ALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNMAPLPVKSIVLQ 67
>d2qgsa1 a.211.1.1 (A:1-216) Uncharacterized protein SE1688
{Staphylococcus epidermidis [TaxId: 1282]}
Length = 216
Score = 25.8 bits (56), Expect = 3.4
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 11 LQLKKALEWELSLDNRDLRSHAWYHGAIPRSRAEEIIENEG 51
+++KKA E+ S D H H + A I + E
Sbjct: 5 MKIKKAYEYMKSFHQHDTTGHDIAHVERVYNNACYIAKREN 45
>d3djba1 a.211.1.1 (A:2-214) Uncharacterized protein BT9727_1981
{Bacillus thuringiensis [TaxId: 1428]}
Length = 213
Score = 25.0 bits (54), Expect = 6.0
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 12 QLKKALEWELSLDNRDLRSHAWYHGAIPRSRAEEIIENEG 51
+++K + + + +D H WYH A + E EG
Sbjct: 5 KIEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEG 44
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase
(MetRS) {Pyrococcus abyssi [TaxId: 29292]}
Length = 361
Score = 25.4 bits (54), Expect = 6.0
Identities = 11/63 (17%), Positives = 22/63 (34%)
Query: 123 ERVQFQFEDDLFDTVPDLITFYVGSGKPISSLSGAKIKSPKNRYSCDILVVSNAKQSKSL 182
+ F +D++ F + GK A+ P + + + L + K S S
Sbjct: 255 RVIHFIGKDNIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSR 314
Query: 183 SNI 185
+
Sbjct: 315 NWA 317
>d1wh0a_ b.15.1.3 (A:) Ubiquitin carboxyl-terminal hydrolase 19,
USP19 {Human (Homo sapiens) [TaxId: 9606]}
Length = 134
Score = 24.2 bits (52), Expect = 7.9
Identities = 8/60 (13%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 92 ERVQFQFEDDLFD-TVPDLITFYVVIQPDTVYERVQFQFEDDLFDTV-PDLITFYVGSGK 149
+ + F + F ++ + P F+++ L + + P+ TF + +
Sbjct: 44 DTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHT-TFRWQVKLRNLIEPEQCTFCFTASR 102
>d2bm3a1 b.2.2.2 (A:5-166) Scaffolding dockerin binding protein A,
SdbA {Clostridium thermocellum [TaxId: 1515]}
Length = 162
Score = 24.4 bits (53), Expect = 8.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 102 LFDTVPDLITFYVVIQPD 119
LFD ++IT Y VIQPD
Sbjct: 145 LFDWDGEVITGYEVIQPD 162
>d1ey1a_ a.79.1.1 (A:) Antitermination factor NusB {Escherichia coli
[TaxId: 562]}
Length = 139
Score = 23.9 bits (51), Expect = 9.5
Identities = 7/68 (10%), Positives = 20/68 (29%)
Query: 18 EWELSLDNRDLRSHAWYHGAIPRSRAEEIIENEGDFLIRDCTSQPGNYVLSCMSKTQYLH 77
E ++ + A + + +++ L+ + + + +
Sbjct: 37 EQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRS 96
Query: 78 FVINKVVI 85
V KV I
Sbjct: 97 DVPYKVAI 104
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.415
Gapped
Lambda K H
0.267 0.0551 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 762,161
Number of extensions: 36170
Number of successful extensions: 197
Number of sequences better than 10.0: 1
Number of HSP's gapped: 132
Number of HSP's successfully gapped: 57
Length of query: 192
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 112
Effective length of database: 1,309,196
Effective search space: 146629952
Effective search space used: 146629952
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.4 bits)