Query psy519
Match_columns 351
No_of_seqs 596 out of 2788
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 19:38:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy519.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/519hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 7.5E-48 2.6E-52 329.5 39.1 277 7-290 28-319 (321)
2 1vyh_C Platelet-activating fac 100.0 5.3E-48 1.8E-52 341.6 39.1 275 6-289 103-408 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 1.8E-46 6.2E-51 323.7 41.0 275 6-289 50-340 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 1.5E-46 5E-51 319.3 37.8 273 2-280 4-294 (304)
5 3frx_A Guanine nucleotide-bind 100.0 1.6E-45 5.4E-50 315.0 39.7 278 5-293 11-318 (319)
6 2pbi_B Guanine nucleotide-bind 100.0 1.5E-45 5E-50 319.6 39.2 274 6-284 59-352 (354)
7 1nr0_A Actin interacting prote 100.0 1.3E-45 4.3E-50 342.4 41.0 311 6-329 54-522 (611)
8 4gqb_B Methylosome protein 50; 100.0 4.9E-46 1.7E-50 320.6 35.3 276 8-293 27-332 (344)
9 4g56_B MGC81050 protein; prote 100.0 5.5E-46 1.9E-50 322.6 33.1 276 8-292 39-343 (357)
10 1nr0_A Actin interacting prote 100.0 2.9E-45 9.8E-50 340.0 39.9 314 7-331 99-569 (611)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 5E-45 1.7E-49 315.3 35.5 281 6-294 10-337 (345)
12 4ery_A WD repeat-containing pr 100.0 1.8E-43 6.3E-48 301.4 41.0 279 6-290 18-310 (312)
13 2xzm_R RACK1; ribosome, transl 100.0 1.2E-43 4.2E-48 306.5 39.7 276 5-293 15-341 (343)
14 3iz6_a 40S ribosomal protein R 100.0 4E-45 1.4E-49 320.1 29.8 279 6-292 61-375 (380)
15 3ow8_A WD repeat-containing pr 100.0 1E-43 3.4E-48 303.9 35.4 239 7-251 76-320 (321)
16 2hes_X YDR267CP; beta-propelle 100.0 3.4E-43 1.2E-47 302.0 36.9 276 5-291 8-327 (330)
17 1erj_A Transcriptional repress 100.0 2.4E-42 8.4E-47 303.8 40.7 271 9-290 62-387 (393)
18 1vyh_C Platelet-activating fac 100.0 4.5E-43 1.6E-47 310.0 35.6 241 5-251 144-410 (410)
19 4gqb_B Methylosome protein 50; 100.0 4.6E-43 1.6E-47 302.1 34.5 238 10-255 81-334 (344)
20 2ymu_A WD-40 repeat protein; u 100.0 6.6E-42 2.3E-46 315.8 44.1 303 7-326 258-577 (577)
21 2ynn_A Coatomer subunit beta'; 100.0 6.5E-42 2.2E-46 290.6 37.5 276 46-327 9-300 (304)
22 1gxr_A ESG1, transducin-like e 100.0 3.4E-41 1.1E-45 289.9 41.5 271 8-287 48-335 (337)
23 1got_B GT-beta; complex (GTP-b 100.0 1.4E-41 4.8E-46 293.2 38.9 270 46-326 51-340 (340)
24 4aow_A Guanine nucleotide-bind 100.0 2.4E-41 8.1E-46 291.4 40.0 280 5-294 32-339 (340)
25 3dm0_A Maltose-binding peripla 100.0 8.8E-42 3E-46 321.5 39.3 275 6-290 377-691 (694)
26 1gxr_A ESG1, transducin-like e 100.0 1.4E-41 4.9E-46 292.2 36.3 308 9-328 7-336 (337)
27 3frx_A Guanine nucleotide-bind 100.0 5E-41 1.7E-45 287.1 38.5 273 46-330 13-318 (319)
28 2pm9_A Protein WEB1, protein t 100.0 1.7E-42 5.9E-47 306.8 29.6 309 10-329 11-414 (416)
29 2ymu_A WD-40 repeat protein; u 100.0 1.9E-40 6.5E-45 306.0 43.1 305 7-328 217-538 (577)
30 3zwl_B Eukaryotic translation 100.0 2.2E-40 7.4E-45 288.3 40.9 277 7-294 28-348 (369)
31 2pm7_B Protein transport prote 100.0 4.8E-41 1.6E-45 284.3 35.1 243 5-252 3-285 (297)
32 3vl1_A 26S proteasome regulato 100.0 1.7E-41 6E-46 300.9 32.4 269 14-291 59-364 (420)
33 1r5m_A SIR4-interacting protei 100.0 9.3E-41 3.2E-45 296.1 36.9 306 8-328 42-424 (425)
34 4g56_B MGC81050 protein; prote 100.0 2.1E-41 7.1E-46 293.8 31.9 239 8-254 91-345 (357)
35 2pbi_B Guanine nucleotide-bind 100.0 1.8E-40 6.1E-45 287.7 37.4 271 46-326 60-354 (354)
36 4ery_A WD repeat-containing pr 100.0 6.8E-40 2.3E-44 279.3 39.8 276 46-327 19-310 (312)
37 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.7E-41 3E-45 288.7 34.4 285 46-337 11-343 (345)
38 1sq9_A Antiviral protein SKI8; 100.0 7.5E-41 2.6E-45 294.5 33.9 278 5-293 10-396 (397)
39 3k26_A Polycomb protein EED; W 100.0 2.6E-41 8.9E-46 293.9 28.1 277 5-290 12-364 (366)
40 3ei3_B DNA damage-binding prot 100.0 4E-40 1.4E-44 288.8 35.5 272 6-291 68-381 (383)
41 2pm9_A Protein WEB1, protein t 100.0 2.9E-41 1E-45 298.9 28.0 276 8-292 64-414 (416)
42 2hes_X YDR267CP; beta-propelle 100.0 3.5E-40 1.2E-44 283.2 33.1 238 9-252 56-328 (330)
43 3mkq_A Coatomer beta'-subunit; 100.0 4.1E-40 1.4E-44 315.5 37.1 279 2-286 4-299 (814)
44 3i2n_A WD repeat-containing pr 100.0 5.8E-41 2E-45 290.8 28.3 280 5-293 12-354 (357)
45 1k8k_C P40, ARP2/3 complex 41 100.0 3.9E-40 1.3E-44 287.3 33.7 240 6-252 3-274 (372)
46 2xzm_R RACK1; ribosome, transl 100.0 3.6E-39 1.2E-43 278.5 38.4 273 46-331 17-342 (343)
47 1r5m_A SIR4-interacting protei 100.0 6.3E-40 2.1E-44 290.8 33.9 269 9-285 106-421 (425)
48 3bg1_A Protein SEC13 homolog; 100.0 3.9E-41 1.3E-45 287.4 24.0 242 4-251 6-292 (316)
49 3sfz_A APAF-1, apoptotic pepti 100.0 3E-39 1E-43 322.6 40.8 313 7-331 611-1036(1249)
50 4e54_B DNA damage-binding prot 100.0 3.3E-40 1.1E-44 294.0 30.3 279 7-294 115-432 (435)
51 1erj_A Transcriptional repress 100.0 3.4E-39 1.1E-43 283.8 36.2 236 11-253 123-390 (393)
52 3iz6_a 40S ribosomal protein R 100.0 3.2E-40 1.1E-44 289.0 29.0 244 7-255 104-378 (380)
53 3vl1_A 26S proteasome regulato 100.0 2E-39 7E-44 287.6 34.5 270 12-290 98-417 (420)
54 3odt_A Protein DOA1; ubiquitin 100.0 5.3E-39 1.8E-43 273.4 34.9 271 5-294 12-298 (313)
55 3dwl_C Actin-related protein 2 100.0 4.9E-41 1.7E-45 293.8 22.8 239 5-251 5-280 (377)
56 3v7d_B Cell division control p 100.0 3.7E-38 1.3E-42 283.2 41.2 274 7-296 117-425 (464)
57 3gre_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 294.4 27.1 248 5-258 57-365 (437)
58 2oaj_A Protein SNI1; WD40 repe 100.0 3.3E-39 1.1E-43 310.2 35.7 201 7-215 13-248 (902)
59 4aez_A CDC20, WD repeat-contai 100.0 6.8E-39 2.3E-43 282.7 34.9 266 15-294 97-382 (401)
60 3dw8_B Serine/threonine-protei 100.0 2E-39 6.9E-44 289.9 31.2 264 9-280 26-438 (447)
61 3f3f_A Nucleoporin SEH1; struc 100.0 6.3E-39 2.2E-43 276.6 33.2 249 3-257 3-342 (351)
62 3jrp_A Fusion protein of prote 100.0 1.2E-38 4.1E-43 278.4 32.7 247 3-254 3-289 (379)
63 2aq5_A Coronin-1A; WD40 repeat 100.0 3.4E-38 1.2E-42 278.3 35.3 273 14-296 37-346 (402)
64 1yfq_A Cell cycle arrest prote 100.0 7.8E-39 2.7E-43 275.9 30.5 269 1-281 1-315 (342)
65 2pm7_B Protein transport prote 100.0 4.5E-38 1.5E-42 266.1 33.3 238 46-290 5-283 (297)
66 3mkq_A Coatomer beta'-subunit; 100.0 4.2E-38 1.4E-42 301.6 37.2 313 7-332 51-463 (814)
67 2j04_B YDR362CP, TAU91; beta p 100.0 5.5E-40 1.9E-44 296.7 22.0 310 11-330 133-518 (524)
68 4h5i_A Guanine nucleotide-exch 100.0 6.7E-38 2.3E-42 272.5 33.0 197 52-253 135-344 (365)
69 4a11_B DNA excision repair pro 100.0 2.4E-37 8.3E-42 272.8 37.0 283 5-296 37-369 (408)
70 3dm0_A Maltose-binding peripla 100.0 1.3E-37 4.4E-42 293.1 37.1 275 46-329 378-693 (694)
71 3sfz_A APAF-1, apoptotic pepti 100.0 6E-38 2.1E-42 313.2 36.6 315 7-333 653-1162(1249)
72 1pgu_A Actin interacting prote 100.0 3.5E-37 1.2E-41 286.0 39.3 270 6-285 13-324 (615)
73 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.5E-36 5.1E-41 271.4 41.3 303 5-329 112-442 (445)
74 4aow_A Guanine nucleotide-bind 100.0 1.2E-36 4.2E-41 261.9 37.3 276 46-332 34-340 (340)
75 3mmy_A MRNA export factor; mRN 100.0 9.8E-38 3.3E-42 271.4 30.4 285 4-298 32-355 (368)
76 3zwl_B Eukaryotic translation 100.0 1.3E-36 4.6E-41 264.3 37.2 278 46-331 28-348 (369)
77 1pgu_A Actin interacting prote 100.0 1E-36 3.5E-41 282.9 38.4 308 7-329 156-614 (615)
78 3v7d_B Cell division control p 100.0 2.5E-36 8.4E-41 271.3 38.9 268 7-289 158-462 (464)
79 4aez_A CDC20, WD repeat-contai 100.0 7.2E-37 2.5E-41 269.7 34.7 246 8-258 131-386 (401)
80 4gga_A P55CDC, cell division c 100.0 2.5E-36 8.5E-41 267.9 38.3 265 14-289 108-395 (420)
81 2oaj_A Protein SNI1; WD40 repe 100.0 2.7E-37 9.2E-42 296.9 33.2 308 10-327 97-659 (902)
82 3ei3_B DNA damage-binding prot 100.0 2E-36 6.9E-41 265.2 34.9 275 46-329 69-382 (383)
83 1k8k_C P40, ARP2/3 complex 41 100.0 2E-36 6.9E-41 263.8 32.7 277 48-332 6-364 (372)
84 3k26_A Polycomb protein EED; W 100.0 3.1E-37 1.1E-41 268.2 27.3 238 9-252 67-366 (366)
85 3vu4_A KMHSV2; beta-propeller 100.0 5.7E-36 2E-40 259.5 35.0 272 8-294 16-341 (355)
86 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-37 5.2E-42 275.1 25.2 251 8-281 12-290 (588)
87 3bg1_A Protein SEC13 homolog; 100.0 2.5E-37 8.5E-42 263.8 24.9 239 46-291 9-292 (316)
88 4e54_B DNA damage-binding prot 100.0 5.3E-37 1.8E-41 273.4 28.0 280 46-331 115-432 (435)
89 1p22_A F-BOX/WD-repeat protein 100.0 8.6E-36 2.9E-40 265.6 35.7 264 8-294 130-416 (435)
90 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-35 1.2E-39 262.5 39.0 268 7-290 155-440 (445)
91 4ggc_A P55CDC, cell division c 100.0 7.1E-35 2.4E-39 248.5 37.7 263 14-290 28-313 (318)
92 3dw8_B Serine/threonine-protei 100.0 4.5E-36 1.5E-40 268.2 31.6 243 47-298 25-379 (447)
93 2j04_B YDR362CP, TAU91; beta p 100.0 2.2E-37 7.4E-42 279.8 23.2 273 8-287 204-515 (524)
94 3dwl_C Actin-related protein 2 100.0 8.7E-38 3E-42 273.2 19.9 227 49-280 10-273 (377)
95 3jro_A Fusion protein of prote 100.0 1E-36 3.5E-41 288.8 27.9 244 5-253 3-286 (753)
96 1sq9_A Antiviral protein SKI8; 100.0 1.1E-35 3.8E-40 261.5 32.0 274 46-330 12-396 (397)
97 3odt_A Protein DOA1; ubiquitin 100.0 6E-35 2E-39 248.3 34.3 238 7-258 55-302 (313)
98 3gre_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 268.4 27.6 263 17-295 33-362 (437)
99 4gga_A P55CDC, cell division c 100.0 8.1E-35 2.8E-39 258.1 36.1 243 8-256 144-399 (420)
100 3i2n_A WD repeat-containing pr 100.0 9.2E-36 3.2E-40 258.1 29.0 275 46-330 14-354 (357)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.8E-35 1.3E-39 262.5 33.9 258 11-275 4-371 (450)
102 3jrp_A Fusion protein of prote 100.0 2.4E-35 8.3E-40 257.4 31.7 240 46-292 7-287 (379)
103 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-35 4.2E-40 256.4 27.7 262 16-285 41-329 (343)
104 2xyi_A Probable histone-bindin 100.0 2.1E-35 7.3E-40 262.6 30.1 241 8-253 125-411 (430)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-35 7E-40 260.5 28.3 247 6-256 76-346 (402)
106 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-34 4.4E-39 249.5 32.1 204 46-253 7-250 (351)
107 4a11_B DNA excision repair pro 100.0 2E-34 6.9E-39 254.1 31.2 290 34-333 22-369 (408)
108 2xyi_A Probable histone-bindin 100.0 8.2E-34 2.8E-38 252.4 31.0 271 12-286 46-407 (430)
109 1l0q_A Surface layer protein; 100.0 4.7E-32 1.6E-36 238.0 40.9 301 12-322 32-372 (391)
110 4ggc_A P55CDC, cell division c 100.0 1.2E-32 4E-37 234.8 35.8 240 8-253 64-316 (318)
111 3bws_A Protein LP49; two-domai 100.0 7.9E-33 2.7E-37 246.2 36.2 269 12-289 123-429 (433)
112 2j04_A TAU60, YPL007P, hypothe 100.0 6.3E-34 2.1E-38 252.1 27.9 271 8-318 49-351 (588)
113 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-33 3.7E-38 252.1 29.7 235 6-257 168-419 (435)
114 4gq1_A NUP37; propeller, trans 100.0 4.6E-34 1.6E-38 250.9 23.5 234 11-251 89-388 (393)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.1E-33 3.1E-37 247.1 32.3 234 50-290 4-337 (450)
116 1yfq_A Cell cycle arrest prote 100.0 3E-33 1E-37 241.0 27.6 232 8-250 53-322 (342)
117 3jro_A Fusion protein of prote 100.0 1.5E-33 5.3E-38 267.0 27.5 239 46-291 5-284 (753)
118 4gq1_A NUP37; propeller, trans 100.0 7E-34 2.4E-38 249.8 22.1 271 12-289 16-389 (393)
119 1l0q_A Surface layer protein; 100.0 4.9E-31 1.7E-35 231.5 38.1 260 25-296 2-279 (391)
120 3bws_A Protein LP49; two-domai 100.0 2.8E-32 9.5E-37 242.7 30.4 310 11-328 60-431 (433)
121 4h5i_A Guanine nucleotide-exch 100.0 2.9E-32 1E-36 237.0 26.3 197 9-210 131-344 (365)
122 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-32 8.2E-37 235.8 25.4 223 58-292 44-292 (343)
123 3mmy_A MRNA export factor; mRN 100.0 2.2E-30 7.4E-35 225.0 35.1 270 46-326 35-343 (368)
124 2w18_A PALB2, fancn, partner a 100.0 2.2E-31 7.4E-36 222.1 25.7 237 5-250 80-355 (356)
125 3vu4_A KMHSV2; beta-propeller 100.0 4E-30 1.4E-34 222.7 26.8 229 13-253 60-337 (355)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-29 4E-34 224.2 27.0 277 11-294 62-389 (415)
127 1nir_A Nitrite reductase; hemo 100.0 7.8E-28 2.7E-32 218.9 36.0 311 18-337 144-522 (543)
128 1nir_A Nitrite reductase; hemo 100.0 1E-27 3.4E-32 218.2 31.1 291 14-311 181-533 (543)
129 2ecf_A Dipeptidyl peptidase IV 100.0 6.2E-28 2.1E-32 229.0 29.0 296 11-315 36-442 (741)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 4E-27 1.4E-31 208.0 32.1 241 25-271 143-410 (415)
131 2w18_A PALB2, fancn, partner a 100.0 2.7E-27 9.2E-32 197.5 28.9 171 111-289 155-354 (356)
132 3vgz_A Uncharacterized protein 100.0 1.6E-26 5.5E-31 199.7 34.5 261 12-280 41-335 (353)
133 1xfd_A DIP, dipeptidyl aminope 100.0 1E-27 3.5E-32 226.8 23.2 297 12-313 17-425 (723)
134 3u4y_A Uncharacterized protein 100.0 1.6E-25 5.5E-30 191.9 33.2 268 18-294 4-306 (331)
135 2ojh_A Uncharacterized protein 100.0 2.8E-26 9.6E-31 192.8 25.6 244 31-280 18-293 (297)
136 2z3z_A Dipeptidyl aminopeptida 100.0 4.2E-26 1.4E-30 215.3 27.9 275 12-294 82-437 (706)
137 1ri6_A Putative isomerase YBHE 99.9 4E-24 1.4E-28 183.7 33.1 265 25-296 4-314 (343)
138 1k32_A Tricorn protease; prote 99.9 3E-25 1E-29 217.6 29.2 305 13-331 246-639 (1045)
139 1ri6_A Putative isomerase YBHE 99.9 1.5E-24 5.2E-29 186.4 29.8 237 10-255 36-313 (343)
140 1pby_B Quinohemoprotein amine 99.9 1.4E-24 4.9E-29 186.1 29.2 258 26-296 2-314 (337)
141 3u4y_A Uncharacterized protein 99.9 3.6E-24 1.2E-28 183.5 31.3 268 57-331 4-306 (331)
142 2ecf_A Dipeptidyl peptidase IV 99.9 7.4E-25 2.5E-29 207.8 28.3 273 12-290 109-457 (741)
143 3o4h_A Acylamino-acid-releasin 99.9 4E-25 1.4E-29 204.0 25.4 264 11-291 21-314 (582)
144 2z3z_A Dipeptidyl aminopeptida 99.9 7.7E-25 2.6E-29 206.6 27.7 309 14-331 28-437 (706)
145 1xfd_A DIP, dipeptidyl aminope 99.9 3.9E-25 1.3E-29 209.2 25.6 265 13-281 62-432 (723)
146 1k32_A Tricorn protease; prote 99.9 1.8E-24 6.1E-29 212.2 29.6 274 10-294 294-639 (1045)
147 3vgz_A Uncharacterized protein 99.9 3.2E-23 1.1E-27 178.9 34.1 262 49-314 39-330 (353)
148 2ojh_A Uncharacterized protein 99.9 1.1E-24 3.6E-29 183.2 22.7 227 9-243 39-293 (297)
149 1jmx_B Amine dehydrogenase; ox 99.9 1.2E-23 4.1E-28 181.3 27.8 233 16-261 4-334 (349)
150 3hfq_A Uncharacterized protein 99.9 1.9E-22 6.4E-27 174.0 33.5 262 34-300 15-327 (347)
151 1pby_B Quinohemoprotein amine 99.9 2.2E-23 7.6E-28 178.7 25.9 237 13-261 35-319 (337)
152 3hfq_A Uncharacterized protein 99.9 1.2E-22 4.2E-27 175.1 29.6 240 12-257 40-324 (347)
153 2oit_A Nucleoporin 214KDA; NH2 99.9 6.9E-24 2.4E-28 188.0 21.8 234 11-251 36-332 (434)
154 1z68_A Fibroblast activation p 99.9 3.8E-24 1.3E-28 202.3 18.1 257 15-279 19-376 (719)
155 3scy_A Hypothetical bacterial 99.9 4.7E-21 1.6E-25 166.2 34.9 266 25-295 13-342 (361)
156 3scy_A Hypothetical bacterial 99.9 1.8E-21 6.1E-26 168.8 31.6 240 10-257 48-344 (361)
157 3pe7_A Oligogalacturonate lyas 99.9 5.2E-22 1.8E-26 173.8 28.1 260 17-280 41-372 (388)
158 2oit_A Nucleoporin 214KDA; NH2 99.9 1.5E-23 5.2E-28 185.8 18.3 212 35-253 23-279 (434)
159 1z68_A Fibroblast activation p 99.9 4.1E-23 1.4E-27 195.2 21.6 278 14-296 62-447 (719)
160 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-21 3.7E-26 169.0 27.4 229 55-295 4-328 (349)
161 3pe7_A Oligogalacturonate lyas 99.9 1.1E-21 3.8E-26 171.7 25.9 258 56-315 41-368 (388)
162 4a5s_A Dipeptidyl peptidase 4 99.9 2E-21 7E-26 184.0 28.1 262 11-279 16-383 (740)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 4.8E-21 1.6E-25 166.4 25.1 237 12-253 40-342 (365)
164 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.6E-20 8.7E-25 161.8 28.5 238 51-293 40-342 (365)
165 1q7f_A NHL, brain tumor CG1071 99.9 4.5E-19 1.5E-23 148.6 34.9 237 8-254 26-282 (286)
166 3c5m_A Oligogalacturonate lyas 99.9 1.3E-21 4.5E-26 171.5 19.9 259 14-280 38-372 (396)
167 3o4h_A Acylamino-acid-releasin 99.9 5.9E-21 2E-25 176.1 24.8 225 50-286 21-273 (582)
168 4a5s_A Dipeptidyl peptidase 4 99.9 1E-20 3.4E-25 179.3 23.7 241 52-298 18-359 (740)
169 3fvz_A Peptidyl-glycine alpha- 99.9 2.2E-19 7.6E-24 153.5 29.5 235 11-252 23-322 (329)
170 3azo_A Aminopeptidase; POP fam 99.9 1.9E-19 6.5E-24 168.6 29.0 284 8-298 20-375 (662)
171 2dg1_A DRP35, lactonase; beta 99.9 2.9E-18 9.9E-23 146.8 30.7 265 12-280 6-301 (333)
172 3fvz_A Peptidyl-glycine alpha- 99.8 6.8E-18 2.3E-22 144.3 30.5 234 49-286 22-319 (329)
173 3c5m_A Oligogalacturonate lyas 99.8 7.7E-20 2.6E-24 160.3 16.6 260 52-313 37-366 (396)
174 1rwi_B Serine/threonine-protei 99.8 1.7E-17 5.7E-22 137.6 28.3 238 13-256 25-268 (270)
175 2xdw_A Prolyl endopeptidase; a 99.8 3.8E-18 1.3E-22 160.9 27.2 246 5-254 118-416 (710)
176 2gop_A Trilobed protease; beta 99.8 1E-17 3.6E-22 144.1 27.7 250 12-282 15-323 (347)
177 1q7f_A NHL, brain tumor CG1071 99.8 1E-16 3.6E-21 134.1 33.1 233 46-290 25-278 (286)
178 2oiz_A Aromatic amine dehydrog 99.8 1.2E-17 3.9E-22 144.6 26.5 239 25-271 15-360 (361)
179 2z2n_A Virginiamycin B lyase; 99.8 3.6E-15 1.2E-19 125.2 39.9 233 10-254 13-256 (299)
180 3e5z_A Putative gluconolactona 99.8 9.1E-17 3.1E-21 135.2 28.7 234 10-256 26-290 (296)
181 3azo_A Aminopeptidase; POP fam 99.8 9.5E-18 3.3E-22 157.0 25.0 234 16-258 81-375 (662)
182 1qks_A Cytochrome CD1 nitrite 99.8 1.5E-15 5.2E-20 138.0 38.3 310 25-337 167-546 (567)
183 2bkl_A Prolyl endopeptidase; m 99.8 9.2E-18 3.1E-22 157.9 24.2 246 6-256 115-401 (695)
184 2xdw_A Prolyl endopeptidase; a 99.8 1.7E-16 5.7E-21 149.7 31.8 245 48-294 122-416 (710)
185 3dsm_A Uncharacterized protein 99.8 2.9E-16 9.9E-21 134.1 30.4 256 33-296 15-305 (328)
186 2bkl_A Prolyl endopeptidase; m 99.8 5.5E-17 1.9E-21 152.6 28.1 272 19-299 75-404 (695)
187 2gop_A Trilobed protease; beta 99.8 5.2E-17 1.8E-21 139.8 24.5 220 13-251 60-330 (347)
188 2dg1_A DRP35, lactonase; beta 99.8 1.1E-15 3.8E-20 130.7 32.0 226 10-243 43-301 (333)
189 3e5z_A Putative gluconolactona 99.8 5.6E-16 1.9E-20 130.3 28.3 222 50-279 27-277 (296)
190 1qks_A Cytochrome CD1 nitrite 99.8 3.4E-15 1.2E-19 135.7 33.7 292 13-311 198-557 (567)
191 2qc5_A Streptogramin B lactona 99.8 8.4E-14 2.9E-18 116.9 39.3 253 11-273 19-286 (300)
192 3no2_A Uncharacterized protein 99.8 9.6E-16 3.3E-20 127.2 26.4 208 25-240 5-231 (276)
193 3dsm_A Uncharacterized protein 99.8 1.2E-15 4.1E-20 130.2 27.3 234 13-258 45-307 (328)
194 2oiz_A Aromatic amine dehydrog 99.8 1.4E-15 4.9E-20 131.4 27.5 135 69-208 29-181 (361)
195 1rwi_B Serine/threonine-protei 99.8 1.3E-15 4.6E-20 126.1 26.1 230 52-286 25-261 (270)
196 1yr2_A Prolyl oligopeptidase; 99.7 2.2E-16 7.6E-21 149.5 23.8 245 6-255 157-444 (741)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 5.8E-15 2E-19 125.0 29.1 233 12-252 18-299 (314)
198 3no2_A Uncharacterized protein 99.7 2.9E-15 9.8E-20 124.4 26.3 209 59-276 3-230 (276)
199 2z2n_A Virginiamycin B lyase; 99.7 1.1E-13 3.8E-18 116.1 35.0 231 11-253 56-296 (299)
200 1yr2_A Prolyl oligopeptidase; 99.7 5.1E-15 1.7E-19 140.2 29.6 272 19-296 114-445 (741)
201 3g4e_A Regucalcin; six bladed 99.7 4.1E-14 1.4E-18 119.0 29.6 228 7-241 8-261 (297)
202 3hrp_A Uncharacterized protein 99.7 2.4E-13 8.2E-18 119.3 30.6 228 51-285 131-406 (409)
203 3iuj_A Prolyl endopeptidase; h 99.7 2.1E-14 7.2E-19 134.8 24.4 248 2-256 119-409 (693)
204 2mad_H Methylamine dehydrogena 99.7 2.7E-12 9.2E-17 111.1 35.4 266 17-296 26-354 (373)
205 3hrp_A Uncharacterized protein 99.7 3.1E-13 1.1E-17 118.6 29.2 232 12-250 131-408 (409)
206 2mad_H Methylamine dehydrogena 99.7 1.4E-12 4.7E-17 112.9 32.6 255 72-335 48-356 (373)
207 2qc5_A Streptogramin B lactona 99.6 2.3E-12 7.9E-17 108.1 33.1 228 11-250 61-298 (300)
208 2ghs_A AGR_C_1268P; regucalcin 99.6 8.5E-13 2.9E-17 112.4 29.7 218 14-241 51-291 (326)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 8E-13 2.7E-17 111.8 28.1 221 51-278 18-287 (314)
210 3sjl_D Methylamine dehydrogena 99.6 1.7E-13 5.8E-18 117.4 23.2 243 16-269 82-384 (386)
211 3sjl_D Methylamine dehydrogena 99.6 6.6E-13 2.3E-17 113.7 25.1 268 16-296 37-367 (386)
212 3g4e_A Regucalcin; six bladed 99.6 4.5E-12 1.6E-16 106.4 29.8 222 52-279 14-262 (297)
213 3dr2_A Exported gluconolactona 99.6 7.5E-13 2.6E-17 111.7 25.0 217 12-243 45-298 (305)
214 1xip_A Nucleoporin NUP159; bet 99.6 7.4E-14 2.5E-18 120.1 17.6 170 52-238 39-230 (388)
215 3c75_H MADH, methylamine dehyd 99.6 1E-12 3.4E-17 114.6 24.7 270 60-336 82-409 (426)
216 3iuj_A Prolyl endopeptidase; h 99.6 1.9E-12 6.5E-17 121.6 27.6 255 39-299 117-412 (693)
217 2qe8_A Uncharacterized protein 99.6 7E-13 2.4E-17 113.8 22.4 232 12-249 17-318 (343)
218 1xip_A Nucleoporin NUP159; bet 99.6 1.3E-13 4.4E-18 118.6 17.3 168 12-197 38-232 (388)
219 3c75_H MADH, methylamine dehyd 99.6 4.1E-12 1.4E-16 110.8 25.5 227 25-258 84-408 (426)
220 2ece_A 462AA long hypothetical 99.5 3.8E-11 1.3E-15 103.7 30.3 217 60-277 93-399 (462)
221 3dr2_A Exported gluconolactona 99.5 8.3E-12 2.8E-16 105.3 25.9 222 50-279 44-297 (305)
222 2ghs_A AGR_C_1268P; regucalcin 99.5 4.8E-11 1.7E-15 101.5 30.1 219 53-279 51-292 (326)
223 1yiq_A Quinohemoprotein alcoho 99.4 4.3E-11 1.5E-15 111.9 25.4 248 25-277 121-536 (689)
224 1fwx_A Nitrous oxide reductase 99.4 5.1E-11 1.7E-15 106.4 24.5 236 61-300 100-439 (595)
225 1kb0_A Quinohemoprotein alcoho 99.4 3.5E-11 1.2E-15 112.2 24.2 247 25-276 128-537 (677)
226 2qe8_A Uncharacterized protein 99.4 9.9E-11 3.4E-15 100.4 24.5 224 51-277 17-309 (343)
227 1mda_H Methylamine dehydrogena 99.4 3.7E-11 1.3E-15 103.0 20.3 258 65-339 36-356 (368)
228 2hz6_A Endoplasmic reticulum t 99.4 5.9E-14 2E-18 121.6 2.4 185 61-258 9-198 (369)
229 2ece_A 462AA long hypothetical 99.4 3.1E-10 1.1E-14 98.0 25.2 221 18-240 88-399 (462)
230 1npe_A Nidogen, entactin; glyc 99.4 8.2E-09 2.8E-13 85.0 32.6 239 26-270 2-262 (267)
231 1yiq_A Quinohemoprotein alcoho 99.4 4.2E-10 1.4E-14 105.2 26.2 266 25-298 70-511 (689)
232 1mda_H Methylamine dehydrogena 99.4 6.2E-11 2.1E-15 101.6 18.9 227 27-261 34-355 (368)
233 2iwa_A Glutamine cyclotransfer 99.4 1E-09 3.4E-14 89.2 24.5 194 52-253 22-238 (266)
234 1kb0_A Quinohemoprotein alcoho 99.3 1.1E-09 3.8E-14 102.2 27.1 264 25-297 77-512 (677)
235 3q7m_A Lipoprotein YFGL, BAMB; 99.3 6.3E-09 2.2E-13 90.2 30.1 255 25-296 53-341 (376)
236 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.5E-09 5E-14 94.3 25.8 224 25-261 103-346 (376)
237 2iwa_A Glutamine cyclotransfer 99.3 1.3E-09 4.6E-14 88.5 23.5 200 82-289 10-237 (266)
238 1npe_A Nidogen, entactin; glyc 99.3 1.3E-08 4.3E-13 83.9 30.0 216 12-234 36-263 (267)
239 2hz6_A Endoplasmic reticulum t 99.3 8.9E-13 3E-17 114.2 2.7 214 25-254 9-238 (369)
240 2fp8_A Strictosidine synthase; 99.3 6.5E-09 2.2E-13 88.2 26.0 232 13-253 20-314 (322)
241 3nol_A Glutamine cyclotransfer 99.2 3.8E-09 1.3E-13 84.8 21.9 181 52-242 44-245 (262)
242 1fwx_A Nitrous oxide reductase 99.2 8.5E-10 2.9E-14 98.6 19.7 225 21-254 99-433 (595)
243 3hxj_A Pyrrolo-quinoline quino 99.2 1.4E-09 4.8E-14 92.4 20.6 214 26-253 108-325 (330)
244 3nol_A Glutamine cyclotransfer 99.2 4.9E-09 1.7E-13 84.1 21.8 170 82-260 32-209 (262)
245 3hxj_A Pyrrolo-quinoline quino 99.2 1.3E-09 4.6E-14 92.5 19.3 212 26-256 31-247 (330)
246 3nok_A Glutaminyl cyclase; bet 99.2 4.4E-09 1.5E-13 84.4 20.3 179 52-241 56-254 (268)
247 2p4o_A Hypothetical protein; p 99.2 1.8E-07 6.1E-12 78.6 29.5 224 12-243 32-279 (306)
248 3mbr_X Glutamine cyclotransfer 99.2 7E-08 2.4E-12 76.8 24.7 182 51-241 21-223 (243)
249 3nok_A Glutaminyl cyclase; bet 99.1 2.3E-08 7.8E-13 80.3 21.9 165 82-258 44-216 (268)
250 1kv9_A Type II quinohemoprotei 99.1 1.7E-08 6E-13 94.0 23.9 243 25-273 117-515 (668)
251 2ad6_A Methanol dehydrogenase 99.1 4.8E-08 1.6E-12 89.3 24.5 229 25-260 115-502 (571)
252 1w6s_A Methanol dehydrogenase 99.1 8.1E-08 2.8E-12 87.8 24.3 242 28-276 124-533 (599)
253 3qqz_A Putative uncharacterize 99.1 7.3E-07 2.5E-11 72.0 27.2 198 47-250 23-251 (255)
254 4a2l_A BT_4663, two-component 99.0 6.9E-06 2.4E-10 78.4 38.3 249 11-273 309-600 (795)
255 3mbr_X Glutamine cyclotransfer 99.0 2.8E-07 9.6E-12 73.3 23.8 169 82-259 10-186 (243)
256 1kv9_A Type II quinohemoprotei 99.0 1.7E-07 6E-12 87.3 25.2 264 25-297 66-493 (668)
257 2fp8_A Strictosidine synthase; 99.0 2.2E-06 7.4E-11 72.5 29.7 200 52-257 20-273 (322)
258 3v64_C Agrin; beta propeller, 99.0 6.1E-06 2.1E-10 70.6 31.6 235 15-257 37-280 (349)
259 4a2l_A BT_4663, two-component 99.0 1.6E-05 5.4E-10 75.9 37.8 232 11-255 262-529 (795)
260 2p4o_A Hypothetical protein; p 99.0 9.9E-07 3.4E-11 74.0 26.0 220 51-280 32-279 (306)
261 1k3i_A Galactose oxidase precu 99.0 6.3E-08 2.2E-12 90.3 19.8 261 16-278 190-530 (656)
262 2xe4_A Oligopeptidase B; hydro 98.9 2.6E-07 8.8E-12 87.5 23.6 240 13-256 175-462 (751)
263 3v65_B Low-density lipoprotein 98.9 7.5E-06 2.6E-10 71.0 30.6 221 34-258 95-324 (386)
264 2ad6_A Methanol dehydrogenase 98.9 5.7E-06 1.9E-10 75.6 30.4 231 61-297 115-499 (571)
265 2xe4_A Oligopeptidase B; hydro 98.9 1E-06 3.4E-11 83.5 26.2 245 47-296 169-462 (751)
266 1flg_A Protein (quinoprotein e 98.9 6.8E-07 2.3E-11 81.8 24.0 248 25-278 117-548 (582)
267 3p5b_L Low density lipoprotein 98.9 1.8E-05 6.2E-10 68.9 31.8 230 26-258 84-326 (400)
268 1ijq_A LDL receptor, low-densi 98.9 2E-05 7E-10 66.3 32.1 225 28-257 4-243 (316)
269 4hw6_A Hypothetical protein, I 98.9 5E-06 1.7E-10 73.2 28.4 234 13-251 140-432 (433)
270 3tc9_A Hypothetical hydrolase; 98.9 4.6E-06 1.6E-10 73.4 27.0 232 13-251 138-429 (430)
271 1w6s_A Methanol dehydrogenase 98.8 4.5E-06 1.5E-10 76.4 27.2 190 25-217 62-350 (599)
272 3v64_C Agrin; beta propeller, 98.8 1.2E-05 4.1E-10 68.7 28.3 200 13-217 74-283 (349)
273 3v9f_A Two-component system se 98.8 9.2E-05 3.2E-09 70.5 38.0 251 11-273 312-597 (781)
274 3v65_B Low-density lipoprotein 98.8 9.4E-06 3.2E-10 70.4 27.0 201 12-217 116-326 (386)
275 1flg_A Protein (quinoprotein e 98.8 9E-06 3.1E-10 74.4 27.4 234 61-298 117-522 (582)
276 3v9f_A Two-component system se 98.8 2.1E-05 7.3E-10 74.9 31.1 230 12-255 363-614 (781)
277 4hw6_A Hypothetical protein, I 98.8 8.2E-06 2.8E-10 71.8 26.1 197 51-254 139-375 (433)
278 3qqz_A Putative uncharacterize 98.8 1E-05 3.4E-10 65.3 24.4 192 9-207 24-251 (255)
279 3p5b_L Low density lipoprotein 98.7 7.9E-05 2.7E-09 64.9 30.8 202 11-217 111-328 (400)
280 3tc9_A Hypothetical hydrolase; 98.7 1.9E-05 6.4E-10 69.5 27.1 151 52-208 138-300 (430)
281 3sov_A LRP-6, low-density lipo 98.7 3.8E-05 1.3E-09 64.6 27.8 227 27-257 6-243 (318)
282 3sov_A LRP-6, low-density lipo 98.7 4.4E-05 1.5E-09 64.2 27.6 201 12-217 35-246 (318)
283 1ijq_A LDL receptor, low-densi 98.7 9.5E-05 3.3E-09 62.2 29.8 200 12-217 30-246 (316)
284 3amr_A 3-phytase; beta-propell 98.7 2.3E-05 7.9E-10 65.7 24.2 187 64-258 43-270 (355)
285 2p9w_A MAL S 1 allergenic prot 98.6 4.3E-05 1.5E-09 63.5 23.2 194 54-252 16-265 (334)
286 3kya_A Putative phosphatase; s 98.6 0.00017 5.8E-09 63.9 28.3 237 13-254 140-477 (496)
287 3m0c_C LDL receptor, low-densi 98.6 0.00033 1.1E-08 66.1 31.9 227 27-257 397-637 (791)
288 1k3i_A Galactose oxidase precu 98.5 6.4E-06 2.2E-10 76.8 17.8 226 14-241 245-530 (656)
289 2xbg_A YCF48-like protein; pho 98.5 0.00047 1.6E-08 58.2 29.4 225 11-250 79-320 (327)
290 3m0c_C LDL receptor, low-densi 98.4 0.00064 2.2E-08 64.3 30.0 203 11-217 423-640 (791)
291 3kya_A Putative phosphatase; s 98.4 0.00051 1.7E-08 60.8 27.2 199 52-254 140-411 (496)
292 2xbg_A YCF48-like protein; pho 98.4 0.00058 2E-08 57.7 32.5 253 11-280 35-313 (327)
293 1n7d_A LDL receptor, low-densi 98.4 3.9E-06 1.3E-10 78.5 12.7 223 34-258 385-620 (699)
294 3amr_A 3-phytase; beta-propell 98.4 0.00029 1E-08 59.1 22.5 199 16-219 30-274 (355)
295 2p9w_A MAL S 1 allergenic prot 98.3 0.00098 3.3E-08 55.4 24.9 164 89-253 10-216 (334)
296 2ism_A Putative oxidoreductase 98.3 0.00046 1.6E-08 58.9 23.0 215 51-274 31-330 (352)
297 1n7d_A LDL receptor, low-densi 98.2 1.6E-05 5.5E-10 74.4 13.7 201 12-217 406-622 (699)
298 3s94_A LRP-6, low-density lipo 98.2 0.0016 5.6E-08 59.9 26.8 219 34-255 17-246 (619)
299 2ism_A Putative oxidoreductase 98.2 0.0019 6.7E-08 55.0 25.0 216 13-240 32-333 (352)
300 3s94_A LRP-6, low-density lipo 98.2 0.00098 3.4E-08 61.4 24.6 198 11-213 39-247 (619)
301 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0042 1.4E-07 57.3 31.9 223 26-254 7-239 (628)
302 2vpj_A Kelch-like protein 12; 98.1 0.00093 3.2E-08 55.5 21.8 222 25-256 15-282 (301)
303 2g8s_A Glucose/sorbosone dehyd 98.1 0.0029 9.8E-08 54.0 25.7 229 12-245 18-347 (353)
304 2xzh_A Clathrin heavy chain 1; 98.0 0.0037 1.3E-07 51.6 30.5 223 35-261 49-299 (365)
305 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0092 3.1E-07 55.0 30.5 194 12-212 37-240 (628)
306 3sre_A PON1, serum paraoxonase 98.0 0.005 1.7E-07 52.2 23.3 192 53-249 52-295 (355)
307 2xn4_A Kelch-like protein 2; s 98.0 0.0028 9.4E-08 52.7 21.6 222 25-255 16-279 (302)
308 3ii7_A Kelch-like protein 7; p 98.0 0.0048 1.6E-07 51.3 23.0 222 25-257 12-277 (306)
309 3pbp_A Nucleoporin NUP82; beta 98.0 0.0019 6.5E-08 55.4 19.8 145 99-248 28-208 (452)
310 3sre_A PON1, serum paraoxonase 98.0 0.0015 5.1E-08 55.4 19.3 187 14-208 52-297 (355)
311 3a9g_A Putative uncharacterize 97.9 0.0091 3.1E-07 50.9 24.7 219 51-275 29-328 (354)
312 2vpj_A Kelch-like protein 12; 97.9 0.0086 2.9E-07 49.6 23.2 180 71-258 31-237 (301)
313 1bpo_A Protein (clathrin); cla 97.8 0.013 4.4E-07 50.5 31.7 225 34-262 47-299 (494)
314 2xzh_A Clathrin heavy chain 1; 97.8 0.012 4E-07 48.8 27.9 233 17-255 72-335 (365)
315 3pbp_A Nucleoporin NUP82; beta 97.7 0.0049 1.7E-07 52.9 18.5 142 60-205 30-208 (452)
316 2xn4_A Kelch-like protein 2; s 97.7 0.015 5.2E-07 48.1 21.6 187 65-258 20-235 (302)
317 4asc_A Kelch repeat and BTB do 97.7 0.0069 2.4E-07 50.6 19.3 220 27-255 7-280 (315)
318 1zgk_A Kelch-like ECH-associat 97.7 0.012 4.2E-07 48.9 20.6 224 25-257 25-292 (308)
319 2g8s_A Glucose/sorbosone dehyd 97.7 0.02 6.7E-07 48.8 24.5 220 52-273 19-337 (353)
320 3a9g_A Putative uncharacterize 97.7 0.021 7.3E-07 48.6 29.5 221 12-240 29-330 (354)
321 3ii7_A Kelch-like protein 7; p 97.6 0.023 7.9E-07 47.1 23.1 187 65-258 16-231 (306)
322 3ott_A Two-component system se 97.4 0.082 2.8E-06 50.0 31.9 228 11-255 21-263 (758)
323 1bpo_A Protein (clathrin); cla 97.4 0.046 1.6E-06 47.1 28.0 234 17-256 71-335 (494)
324 1tl2_A L10, protein (tachylect 97.4 0.0065 2.2E-07 47.2 13.4 144 92-246 41-204 (236)
325 1zgk_A Kelch-like ECH-associat 97.4 0.03 1E-06 46.5 18.9 179 71-257 39-245 (308)
326 4asc_A Kelch repeat and BTB do 97.4 0.047 1.6E-06 45.5 22.3 185 65-258 9-227 (315)
327 1xi4_A Clathrin heavy chain; a 97.4 0.046 1.6E-06 54.3 21.9 224 34-261 47-298 (1630)
328 2woz_A Kelch repeat and BTB do 97.3 0.032 1.1E-06 46.5 18.3 220 26-255 17-290 (318)
329 3das_A Putative oxidoreductase 97.2 0.071 2.4E-06 45.0 29.3 223 12-240 32-326 (347)
330 1tl2_A L10, protein (tachylect 97.2 0.033 1.1E-06 43.3 15.3 141 51-202 41-203 (236)
331 2be1_A Serine/threonine-protei 97.1 0.0057 2E-07 51.4 11.9 190 62-257 11-236 (339)
332 3s25_A Hypothetical 7-bladed b 97.0 0.11 3.7E-06 43.1 24.3 230 25-276 25-279 (302)
333 3das_A Putative oxidoreductase 97.0 0.12 4.2E-06 43.5 27.4 222 50-275 31-324 (347)
334 1xi4_A Clathrin heavy chain; a 97.0 0.088 3E-06 52.4 19.6 233 17-255 71-334 (1630)
335 2uvk_A YJHT; unknown function, 96.9 0.096 3.3E-06 44.4 18.2 225 25-258 20-348 (357)
336 3sbq_A Nitrous-oxide reductase 96.9 0.2 6.9E-06 44.7 24.3 254 28-285 73-461 (638)
337 1cru_A Protein (soluble quinop 96.9 0.19 6.6E-06 44.2 23.8 107 91-197 26-162 (454)
338 3s25_A Hypothetical 7-bladed b 96.8 0.16 5.4E-06 42.1 24.1 188 70-277 36-241 (302)
339 2woz_A Kelch repeat and BTB do 96.7 0.2 6.8E-06 41.6 22.6 187 65-258 20-237 (318)
340 2uvk_A YJHT; unknown function, 96.5 0.33 1.1E-05 41.0 19.4 90 61-153 19-127 (357)
341 2zwa_A Leucine carboxyl methyl 96.4 0.29 9.8E-06 45.8 18.5 187 25-213 398-639 (695)
342 3qhy_B Beta-lactamase inhibito 96.3 0.34 1.2E-05 39.6 18.6 218 13-253 25-247 (282)
343 2zwa_A Leucine carboxyl methyl 96.3 0.27 9.4E-06 45.9 17.8 192 61-256 397-639 (695)
344 3ei3_A DNA damage-binding prot 96.1 1.2 4.2E-05 44.1 30.3 218 52-279 515-757 (1158)
345 2be1_A Serine/threonine-protei 96.1 0.066 2.3E-06 45.0 11.2 146 104-253 11-184 (339)
346 3ei3_A DNA damage-binding prot 96.1 1.3 4.4E-05 44.0 34.5 235 11-253 553-874 (1158)
347 1cru_A Protein (soluble quinop 96.1 0.68 2.3E-05 40.7 20.6 105 133-240 26-162 (454)
348 3ott_A Two-component system se 96.1 1 3.4E-05 42.6 31.4 221 12-248 63-303 (758)
349 2wg3_C Hedgehog-interacting pr 95.2 1.5 5.2E-05 38.6 27.4 224 13-240 15-354 (463)
350 3sbq_A Nitrous-oxide reductase 95.1 0.33 1.1E-05 43.3 12.1 103 134-241 323-454 (638)
351 3qhy_B Beta-lactamase inhibito 93.7 2.4 8.1E-05 34.5 15.5 178 13-209 64-246 (282)
352 1suu_A DNA gyrase subunit A; t 88.9 8.8 0.0003 31.7 22.5 186 61-252 7-231 (312)
353 4gq2_M Nucleoporin NUP120; bet 88.2 20 0.00068 34.9 19.9 37 93-129 237-273 (950)
354 3q6k_A 43.2 kDa salivary prote 85.5 16 0.00055 31.1 23.7 186 50-239 86-341 (381)
355 3b7f_A Glycosyl hydrolase, BNR 84.1 19 0.00064 30.6 24.7 206 26-239 23-296 (394)
356 3zwu_A Alkaline phosphatase PH 84.0 5.8 0.0002 36.0 9.4 59 181-239 478-548 (592)
357 3uc1_A DNA gyrase subunit A; D 83.7 18 0.00061 30.1 25.3 154 50-208 94-278 (327)
358 2wg3_C Hedgehog-interacting pr 82.7 24 0.00083 30.9 28.0 102 52-153 15-158 (463)
359 4a9v_A PHOX; hydrolase, beta-p 81.7 12 0.00039 33.9 10.1 61 180-240 477-549 (592)
360 4hvt_A Ritya.17583.B, post-pro 81.2 36 0.0012 31.8 24.0 234 14-254 131-431 (711)
361 1suu_A DNA gyrase subunit A; t 77.9 28 0.00095 28.6 27.5 180 21-208 6-230 (312)
362 3uc1_A DNA gyrase subunit A; D 77.6 29 0.001 28.7 23.7 222 25-251 3-278 (327)
363 3l6v_A GYRA, DNA gyrase subuni 77.2 33 0.0011 29.1 24.2 187 60-252 5-265 (370)
364 3b7f_A Glycosyl hydrolase, BNR 76.9 33 0.0011 29.0 21.1 180 61-249 22-259 (394)
365 4hvt_A Ritya.17583.B, post-pro 76.8 49 0.0017 30.9 23.9 199 52-254 130-383 (711)
366 1wp5_A Topoisomerase IV; broke 74.0 37 0.0012 28.1 20.4 187 60-252 3-225 (323)
367 1zi0_A DNA gyrase subunit A; b 73.8 36 0.0012 27.9 26.4 178 25-207 3-224 (307)
368 4a9v_A PHOX; hydrolase, beta-p 73.2 23 0.0008 31.9 9.6 60 51-110 476-549 (592)
369 1zi0_A DNA gyrase subunit A; b 71.5 41 0.0014 27.5 22.3 185 61-251 2-225 (307)
370 3no0_A DNA gyrase subunit A; D 71.3 39 0.0013 27.2 20.9 180 63-251 37-245 (276)
371 4fhn_B Nucleoporin NUP120; pro 66.8 19 0.00066 35.8 8.5 37 52-88 239-276 (1139)
372 3no0_A DNA gyrase subunit A; D 66.6 49 0.0017 26.6 21.6 156 92-252 24-196 (276)
373 3zwu_A Alkaline phosphatase PH 64.8 28 0.00097 31.6 8.5 59 94-152 478-549 (592)
374 1wp5_A Topoisomerase IV; broke 64.7 59 0.002 26.8 26.4 182 21-208 3-224 (323)
375 4fhn_B Nucleoporin NUP120; pro 64.7 1.2E+02 0.004 30.3 14.7 36 223-258 239-274 (1139)
376 3f7f_A Nucleoporin NUP120; nuc 59.2 1.2E+02 0.004 28.4 17.0 71 181-253 224-306 (729)
377 3f7f_A Nucleoporin NUP120; nuc 52.1 1.2E+02 0.0041 28.3 10.3 37 52-89 223-259 (729)
378 4gq2_M Nucleoporin NUP120; bet 48.4 2E+02 0.0069 27.9 22.8 39 180-218 237-275 (950)
379 3l6v_A GYRA, DNA gyrase subuni 44.6 1.4E+02 0.0049 25.1 25.8 142 19-166 3-179 (370)
380 3al9_A Plexin-A2; beta-propell 35.8 1E+02 0.0034 27.7 7.2 67 181-247 402-476 (539)
381 1q47_A Semaphorin 3A; beta pro 33.9 1.3E+02 0.0045 26.6 7.5 56 192-247 423-487 (495)
382 3kci_A Probable E3 ubiquitin-p 32.2 2.3E+02 0.0077 23.8 26.5 219 25-252 10-293 (389)
383 3kci_A Probable E3 ubiquitin-p 30.8 2.4E+02 0.0082 23.7 30.2 220 25-253 62-346 (389)
384 3ol2_B Plexin-B1; beta-propell 29.5 1.2E+02 0.0043 27.0 6.6 57 191-247 401-461 (528)
385 2zux_A YESW protein; beta-prop 27.1 3.5E+02 0.012 24.4 21.4 178 71-256 151-404 (591)
386 1q47_A Semaphorin 3A; beta pro 26.5 3.3E+02 0.011 24.0 9.6 67 93-162 405-487 (495)
387 4gz8_A Semaphorin-3A; multi-do 25.8 2.7E+02 0.0093 25.7 8.3 57 191-247 430-495 (667)
388 3nvq_A Semaphorin-7A; beta-pro 25.4 2.7E+02 0.0093 25.2 8.1 57 191-247 381-444 (590)
389 1zvt_A Topoisomerase IV subuni 24.8 2.5E+02 0.0087 22.0 15.7 143 105-252 4-163 (256)
390 3q6k_A 43.2 kDa salivary prote 23.3 3.4E+02 0.012 23.0 23.2 143 50-196 151-341 (381)
391 3mvd_K Regulator of chromosome 23.2 3.4E+02 0.012 22.9 29.9 217 25-253 84-375 (423)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-48 Score=329.45 Aligned_cols=277 Identities=18% Similarity=0.279 Sum_probs=252.5
Q ss_pred CCCCccceEEeeecCCc--cccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCCCcEEEE
Q psy519 7 NHGDHKHFIQNSFKPET--VEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLW 76 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~--~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw 76 (351)
..+|...|.+++|+|+. .+++|++|+.|+.|++|++... +.+|...|.+++|++++.+ ++++.|++|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 107 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 46899999999999851 1568999999999999998755 6789999999999999988 999999999999
Q ss_pred eCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCC
Q psy519 77 SLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 77 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
|+++++.+..+..|...+.+++|+|++++|++++.||.+++||+++++....+..+...+.+++|+|++++|++++.
T Consensus 108 d~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~--- 184 (321)
T 3ow8_A 108 DLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI--- 184 (321)
T ss_dssp ETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET---
T ss_pred ECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC---
Confidence 99999999999999999999999999999999999999999999999999889889999999999999999999999
Q ss_pred CCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEE
Q psy519 157 DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETL 236 (351)
Q Consensus 157 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 236 (351)
|+.|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++||+++++....+. .|...|.+++|+|++++|
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc-CCCCceEEEEECCCCCEE
Confidence 9999999999999999999999999999999999999999999999999999998888775 567889999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeeec
Q psy519 237 VTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMHE 290 (351)
Q Consensus 237 ~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
++++.|+.|++||+.+++.+.. ..+..++|+|++..+++++.++. +++|+.
T Consensus 264 ~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~---i~vwd~ 319 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE---IHIYDC 319 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCC---EEEEEC
T ss_pred EEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCe---EEEEeC
Confidence 9999999999999999987765 45678999999999999988874 556653
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-48 Score=341.57 Aligned_cols=275 Identities=18% Similarity=0.298 Sum_probs=256.0
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~ 79 (351)
...+|..+|.+++|+|+ +++|++|+.||.|++||+.+. +.+|...|.+++|+|++.+ ++|+.|++|++||+.
T Consensus 103 ~l~gh~~~V~~~~~~p~--~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPV--FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp EEECCSSCEEEEEECSS--SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eecccCCcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 35689999999999999 999999999999999999876 7789999999999999988 999999999999999
Q ss_pred CCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 80 QMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 80 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++..+..+.+|...|.+++++|++.++++++. |+.
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~---D~~ 257 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN---DQT 257 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET---TSC
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcC---CCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred EEEEEccCCceeEEeccCCCCEEEEEECCC--------------------CcEEEEEcCCCeEEEEEcCCCcEEEEeecc
Q psy519 160 VRLWSITDGASVRVFSDHVSPVLSIAFSPC--------------------GKYLASGGEDGLVLTHELTTGRVISRFHLQ 219 (351)
Q Consensus 160 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 219 (351)
|++||+++++....+..|...|.+++|+|+ +.+|++|+.|+.|++||+++++.+..+. .
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~-~ 336 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-G 336 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE-C
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE-C
Confidence 999999999999999999999999999996 6789999999999999999999888875 5
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeee
Q psy519 220 EHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMH 289 (351)
Q Consensus 220 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
|...|.+++|+|++++|++|+.||.|++||+.+++.+.. ..+..++|+|++..+++++.|+. +++|+
T Consensus 337 h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~---i~vW~ 408 (410)
T 1vyh_C 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT---VKVWE 408 (410)
T ss_dssp CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSE---EEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCc---EEEEe
Confidence 778899999999999999999999999999998876654 45678999999999999988874 55565
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-46 Score=323.73 Aligned_cols=275 Identities=21% Similarity=0.313 Sum_probs=248.3
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~ 79 (351)
...+|..+|.+++|+|+ +++|++++.||.|++||.... ...|...|.+++|+|++.+ ++++.|+.+++|++.
T Consensus 50 ~l~gH~~~v~~~~~s~d--~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTD--SRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp EECCCSSCEEEEEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred eecCCCCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 35789999999999999 999999999999999998876 5678999999999999988 999999999999998
Q ss_pred CC----eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCC
Q psy519 80 QM----YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGS 155 (351)
Q Consensus 80 ~~----~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 155 (351)
+. +....+.+|...|.++.|++++. +++++.|+.|++||+++++.+..+.+|...|.+++|+|+++++++++.
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~-- 204 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC-- 204 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC--
Confidence 65 35567789999999999998765 889999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC-CCCEEEEEEcCCCC
Q psy519 156 YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQE-HEPVTSLVWSVTGE 234 (351)
Q Consensus 156 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 234 (351)
|+.|++||+++++....+..|...|.+++|+|++++|++++.||.|++||+++++.+..+.... ...|.+++|+|+++
T Consensus 205 -d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 205 -DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp -TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred -CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence 9999999999999999999999999999999999999999999999999999988877664222 24799999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeee
Q psy519 235 TLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMH 289 (351)
Q Consensus 235 ~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
+|++|+.||.|++||+.+++.+.. ..+..++|+|++..+++++.++. +++|+
T Consensus 284 ~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~---i~iWd 340 (340)
T 1got_B 284 LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF---LKIWN 340 (340)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC---EEEEC
T ss_pred EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc---EEecC
Confidence 999999999999999998877654 46678999999999999998875 45553
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-46 Score=319.30 Aligned_cols=273 Identities=19% Similarity=0.243 Sum_probs=242.5
Q ss_pred CCCCcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEE
Q psy519 2 DLSHLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARL 75 (351)
Q Consensus 2 ~~~~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~v 75 (351)
++.....+|...|.+++|+|+ +++|++++.||.|++||+.+. +..|..+|.+++|+|++++ ++|+.|++|++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~--~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPT--EPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eeEEeecCCCCceEEEEECCC--CCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 445667889999999999999 999999999999999999876 6678999999999999988 99999999999
Q ss_pred EeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-ceeEEeccCCCCeEEEEEcc-CCCEEEEEec
Q psy519 76 WSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG-ASVRVFSDHVSPVLSIAFSP-CGKYLASGGT 153 (351)
Q Consensus 76 w~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 153 (351)
||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||++++ .....+.+|...|.+++|+| ++..|++++.
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999887 45567888999999999999 6789999999
Q ss_pred CCCCCeEEEEEccCCceeEEec-cCCCCEEEEEECC--CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEc
Q psy519 154 GSYDKAVRLWSITDGASVRVFS-DHVSPVLSIAFSP--CGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWS 230 (351)
Q Consensus 154 ~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 230 (351)
|+.|++||++++.....+. .|...+..+.|+| ++.+|++++.|+.|++||+++++.+..+. .|...|..++|+
T Consensus 162 ---D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~h~~~v~~~~~~ 237 (304)
T 2ynn_A 162 ---DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAVFH 237 (304)
T ss_dssp ---TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEC
T ss_pred ---CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC-CCCCCEEEEEEC
Confidence 9999999998877665554 5667899999987 77899999999999999999999988886 577899999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeeee-----ecceeEEecCCce--eeeeeccc
Q psy519 231 VTGETLVTGSLTGTVQFYGWPSASKIGIG-----VYPRCAAQPVGFE--AATLAANS 280 (351)
Q Consensus 231 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-----~~~~~~~s~~~~~--~~~~~~~~ 280 (351)
|++++|++|+.||.|++||+.+++..... .+..++++|++.. ++++..++
T Consensus 238 p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g 294 (304)
T 2ynn_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (304)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc
Confidence 99999999999999999999999877653 4457888998863 55554443
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.6e-45 Score=315.00 Aligned_cols=278 Identities=23% Similarity=0.302 Sum_probs=246.2
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----------cCCCccceEEEEECCCCcE-EEEeCCCcE
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------TSGHDMTVWSVEACSKGLA-LTGSRDTTA 73 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i 73 (351)
....+|...|.+++|+|+. +++|++++.|++|++|++... +.+|...|.+++|+|++.+ ++++.|++|
T Consensus 11 ~~l~gH~~~V~~l~~~~~~-~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQ-PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEccccceEEEEEccCCC-ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 3457999999999999961 489999999999999998642 6789999999999999988 999999999
Q ss_pred EEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccC------CCE
Q psy519 74 RLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC------GKY 147 (351)
Q Consensus 74 ~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~------~~~ 147 (351)
++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||++ ++.+..+.+|...|.+++|+|. +..
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 999999999999999999999999999999999999999999999986 5677788889999999999985 448
Q ss_pred EEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEE
Q psy519 148 LASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSL 227 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 227 (351)
+++++. |+.|++||+++.+....+.+|..+|.+++|+|++++|++++.||.|++||+++++.+..+. ....+.++
T Consensus 169 l~s~~~---d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~ 243 (319)
T 3frx_A 169 IISAGN---DKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS--AQDEVFSL 243 (319)
T ss_dssp EEEEET---TSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--CCSCEEEE
T ss_pred EEEEeC---CCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCcEEEE
Confidence 999998 9999999999999999999999999999999999999999999999999999999888775 45789999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeee-------------eecceeEEecCCceeeeeeccceeeEEEeeeceeC
Q psy519 228 VWSVTGETLVTGSLTGTVQFYGWPSASKIGI-------------GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVG 293 (351)
Q Consensus 228 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g 293 (351)
+|+|++.+|++++.+ .+++|++.....+.. ..+.+++|+|+|+.+++++.++ .+++|+..++
T Consensus 244 ~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg---~i~vWd~~t~ 318 (319)
T 3frx_A 244 AFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDN---VIRVWQVMTA 318 (319)
T ss_dssp EECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTS---CEEEEEEEEC
T ss_pred EEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCc---eEEEEEEeec
Confidence 999999999988754 699999987665543 2345789999999999998887 4566665543
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-45 Score=319.62 Aligned_cols=274 Identities=20% Similarity=0.280 Sum_probs=246.2
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~ 79 (351)
...+|...|.+++|+|+ +++|++++.|+.|++||.... ...|...|.+++|+|++.+ ++++.|+.+++|++.
T Consensus 59 ~l~gH~~~V~~~~~s~d--~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKD--KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp EEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred EecCCCCeEEEEEECCC--CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 45789999999999999 999999999999999998766 5567889999999999988 999999999999986
Q ss_pred CC------eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEcc--CCCEEEEE
Q psy519 80 QM------YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSP--CGKYLASG 151 (351)
Q Consensus 80 ~~------~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~ 151 (351)
.. .....+..|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.+++|+| ++++|+++
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEE
T ss_pred ccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEE
Confidence 43 34456778999999999999999999999999999999999999999999999999999988 57899999
Q ss_pred ecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC-CCCEEEEEEc
Q psy519 152 GTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQE-HEPVTSLVWS 230 (351)
Q Consensus 152 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~ 230 (351)
+. |+.|++||+++++.+..+..|...|.+++|+|++.+|++++.|+.|++||++.++.+..+.... ...+.+++|+
T Consensus 217 s~---Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 217 GC---DKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp ET---TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred eC---CCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 99 9999999999999999999999999999999999999999999999999999888776664322 2478999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeE
Q psy519 231 VTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRT 284 (351)
Q Consensus 231 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~ 284 (351)
|++++|++|+.|+.|++||+.+++.+.. ..+..++|+|+|..+++++.++.++.
T Consensus 294 ~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 294 LSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEe
Confidence 9999999999999999999998887654 56778999999999999998885443
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-45 Score=342.42 Aligned_cols=311 Identities=16% Similarity=0.155 Sum_probs=262.5
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCC----CcE
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRD----TTA 73 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d----~~i 73 (351)
...+|...|.+++|||+ |++||+|+.|++|++||+... +.+|.+.|.+++|+|++++ ++++.+ +.|
T Consensus 54 ~~~~h~~~v~~~~~spd--g~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPS--GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp EECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred EecCCCCceEEEEECCC--CcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEE
Confidence 45689999999999999 999999999999999998643 5678999999999999988 666654 367
Q ss_pred EEEeCCCCeeeEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEe
Q psy519 74 RLWSLEQMYPLRIFVGHKQDVTCARFHPKIT-YIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGG 152 (351)
Q Consensus 74 ~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 152 (351)
++|| .++....+.+|...|.+++|+|++. .|++++.|++|++||..+++....+.+|...|.+++|+|++++|++++
T Consensus 132 ~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 132 FLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp EETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE
Confidence 7777 4566778899999999999999987 699999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEccCCceeEEec-------cCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee--------
Q psy519 153 TGSYDKAVRLWSITDGASVRVFS-------DHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH-------- 217 (351)
Q Consensus 153 ~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------- 217 (351)
. |+.|++||+++++.+..+. +|...|.+++|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 210 ~---D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~ 286 (611)
T 1nr0_A 210 G---DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ 286 (611)
T ss_dssp T---TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred C---CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccce
Confidence 9 9999999999999888874 799999999999999999999999999999999877655432
Q ss_pred ----------------------------------ccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-----
Q psy519 218 ----------------------------------LQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----- 258 (351)
Q Consensus 218 ----------------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----- 258 (351)
..|...|.+++|+|++++|++++.|+.|++||+.+++....
T Consensus 287 ~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h 366 (611)
T 1nr0_A 287 QLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH 366 (611)
T ss_dssp EEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSC
T ss_pred eEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCC
Confidence 13557899999999999999999999999999876543211
Q ss_pred --------------------------------------------------------------------------------
Q psy519 259 -------------------------------------------------------------------------------- 258 (351)
Q Consensus 259 -------------------------------------------------------------------------------- 258 (351)
T Consensus 367 ~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~ 446 (611)
T 1nr0_A 367 ATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVP 446 (611)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEE
T ss_pred cceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeee
Confidence
Q ss_pred --eecceeEEecCCceeeeeeccceeeEEEeeeceeC---------ceEEEeeEEEEecCCceeeccEEEecCCccccce
Q psy519 259 --GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVG---------PVVVVESFIVEIRPDKWYEANLIVLDDDLKECNL 327 (351)
Q Consensus 259 --~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 327 (351)
..+..++|+|+|+.+++++.++. +++|+...+ +...+.+ +.|+|++.++... ..+..++.|++
T Consensus 447 ~~~~v~~va~spdg~~lasgs~D~~---v~lwd~~~~~~~~~~~~~h~~~v~~--v~fspdg~~las~-s~d~~v~~w~~ 520 (611)
T 1nr0_A 447 ISYNSSCVALSNDKQFVAVGGQDSK---VHVYKLSGASVSEVKTIVHPAEITS--VAFSNNGAFLVAT-DQSRKVIPYSV 520 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSE---EEEEEEETTEEEEEEEEECSSCEEE--EEECTTSSEEEEE-ETTSCEEEEEG
T ss_pred cCCCceEEEEeCCCCEEEEeCCCCe---EEEEEccCCceeeeeccCCCCceEE--EEECCCCCEEEEE-cCCCCEEEEEc
Confidence 01235789999999999988875 555554433 2223444 7899999987654 67888999988
Q ss_pred ee
Q psy519 328 ET 329 (351)
Q Consensus 328 ~~ 329 (351)
..
T Consensus 521 ~~ 522 (611)
T 1nr0_A 521 AN 522 (611)
T ss_dssp GG
T ss_pred CC
Confidence 75
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.9e-46 Score=320.65 Aligned_cols=276 Identities=14% Similarity=0.157 Sum_probs=231.9
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----------------cCCCccceEEEEECCCCcEEEEeCCC
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------------TSGHDMTVWSVEACSKGLALTGSRDT 71 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------------~~~~~~~i~~~~~~~~~~~~~~~~d~ 71 (351)
..|...|.+++|+|| |++|++++ |+++++|+.... ...+...|.+++|+|++.+++++.||
T Consensus 27 ~~~~~~v~~~~fs~d--G~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg 103 (344)
T 4gqb_B 27 ACMERQLEAARYRSD--GALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSG 103 (344)
T ss_dssp SSCCSEEEEEEECTT--SCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTS
T ss_pred ccccCCEEEEEECCC--CCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCC
Confidence 346788999999999 99999876 778888873211 22345679999999999889999999
Q ss_pred cEEEEeCCCCeeeEE----eeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCC-
Q psy519 72 TARLWSLEQMYPLRI----FVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGK- 146 (351)
Q Consensus 72 ~i~vw~~~~~~~~~~----~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~- 146 (351)
+|+|||+++++.+.. ..+|...|++++|+|++++|++|+.|++|++||+++++.+..+.+|...|.+++|+|++.
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 999999998875443 358999999999999999999999999999999999999999999999999999999885
Q ss_pred EEEEEecCCCCCeEEEEEccCCceeEEec--cCCCCEEEEEECC-CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCC
Q psy519 147 YLASGGTGSYDKAVRLWSITDGASVRVFS--DHVSPVLSIAFSP-CGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEP 223 (351)
Q Consensus 147 ~l~~~~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 223 (351)
+|++++. |+.|++||+++++....+. .+...+.+++|+| ++++|++|+.||.|++||+++++.+..+. .|...
T Consensus 184 ~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~~~ 259 (344)
T 4gqb_B 184 VFLSCSE---DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHSQC 259 (344)
T ss_dssp EEEEEET---TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCSSC
T ss_pred ceeeecc---ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCCCC
Confidence 6788888 9999999999998888764 4556789999999 55789999999999999999999988886 57789
Q ss_pred EEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeee----eecceeEEecCCce-eeeeeccceeeEEEeeeceeC
Q psy519 224 VTSLVWSVTG-ETLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPVGFE-AATLAANSRVRTLREMHEIVG 293 (351)
Q Consensus 224 v~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~g 293 (351)
|.+++|+|++ ++|++|+.|+.|++||+.+++.... ..+.+++|+|++.. +++++.|+. +++|+..+.
T Consensus 260 v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~---v~~w~v~~~ 332 (344)
T 4gqb_B 260 VTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ---VVHHVVPTE 332 (344)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSC---EEEEECCC-
T ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe---EEEEECCCC
Confidence 9999999998 5799999999999999999877643 56778999999875 556666764 556665443
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.5e-46 Score=322.59 Aligned_cols=276 Identities=17% Similarity=0.141 Sum_probs=233.3
Q ss_pred CCCccceEEeeecCCccccEEEEecC------CCceEEEecCCc---------cCCCccceEEEEECCCCcEEEEeCCCc
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLES------QKNLQSRYLPYY---------TSGHDMTVWSVEACSKGLALTGSRDTT 72 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~------~~~i~i~~~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~d~~ 72 (351)
..|...|.+++|||| |++||+++. |+.|++|+.... ..+|...|.+++|+|++.+++++.|++
T Consensus 39 ~~H~~~V~~v~fSpD--G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~ 116 (357)
T 4g56_B 39 ACMEVQIGAVRYRRD--GALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGA 116 (357)
T ss_dssp -CCCSEEEEEEECSS--SCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSC
T ss_pred ccccCCEEEEEECCC--CCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCE
Confidence 458999999999999 999999987 678999987665 346888999999999999999999999
Q ss_pred EEEEeCCCCeeeE----EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCC-E
Q psy519 73 ARLWSLEQMYPLR----IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGK-Y 147 (351)
Q Consensus 73 i~vw~~~~~~~~~----~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 147 (351)
|++||+.+++... ...+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|++. +
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 9999998876542 3347999999999999999999999999999999999999999999999999999999875 7
Q ss_pred EEEEecCCCCCeEEEEEccCCceeEEec--cCCCCEEEEEECCC-CcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCE
Q psy519 148 LASGGTGSYDKAVRLWSITDGASVRVFS--DHVSPVLSIAFSPC-GKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPV 224 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 224 (351)
+++++. |+.|++||+++++....+. .+...+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+. .+...|
T Consensus 197 ~~s~~~---dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~-~~~~~v 272 (357)
T 4g56_B 197 FLSCGE---DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA-VHSQNI 272 (357)
T ss_dssp EEEEET---TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC-CCSSCE
T ss_pred eeeecc---CCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe-ccceeE
Confidence 888888 9999999999987766543 46678999999997 5689999999999999999999888875 566899
Q ss_pred EEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeee----eecceeEEec-CCceeeeeeccceeeEEEeeecee
Q psy519 225 TSLVWSVTG-ETLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQP-VGFEAATLAANSRVRTLREMHEIV 292 (351)
Q Consensus 225 ~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~ 292 (351)
.+++|+|++ ++|++|+.|+.|+|||+++++.+.. ..+..++|+| ++..+++++.|+ .+++|+..+
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg---~v~iW~~~~ 343 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDH---KVLHHHLPS 343 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS---CEEEEECC-
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCC---eEEEEECCC
Confidence 999999987 5799999999999999999887754 5677899999 788899988887 456666543
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.9e-45 Score=340.04 Aligned_cols=314 Identities=19% Similarity=0.196 Sum_probs=263.9
Q ss_pred CCCCccceEEeeecCCccccEEEEecCC----CceEEEecCCc---cCCCccceEEEEECCCCc--EEEEeCCCcEEEEe
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQ----KNLQSRYLPYY---TSGHDMTVWSVEACSKGL--ALTGSRDTTARLWS 77 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~----~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~--~~~~~~d~~i~vw~ 77 (351)
..+|..+|.+++|+|+ +++|++++.+ +.|++|+.... +.+|...|++++|+|++. +++++.|++|++||
T Consensus 99 ~~~~~~~v~~v~fs~d--g~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd 176 (611)
T 1nr0_A 99 IPVFSGPVKDISWDSE--SKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFE 176 (611)
T ss_dssp EECSSSCEEEEEECTT--SCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEE
T ss_pred ecccCCceEEEEECCC--CCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEE
Confidence 3578899999999999 9999988765 47888886544 789999999999999985 59999999999999
Q ss_pred CCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEec-------cCCCCeEEEEEccCCCEEEE
Q psy519 78 LEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFS-------DHVSPVLSIAFSPCGKYLAS 150 (351)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~ 150 (351)
..+++....+.+|...|.+++|+|++++|++++.|++|++||+.+++....+. +|...|.+++|+|++++|++
T Consensus 177 ~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s 256 (611)
T 1nr0_A 177 GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS 256 (611)
T ss_dssp TTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE
T ss_pred CCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999888874 69999999999999999999
Q ss_pred EecCCCCCeEEEEEccCCceeE-------------------------------------------EeccCCCCEEEEEEC
Q psy519 151 GGTGSYDKAVRLWSITDGASVR-------------------------------------------VFSDHVSPVLSIAFS 187 (351)
Q Consensus 151 ~~~~~~d~~i~i~d~~~~~~~~-------------------------------------------~~~~~~~~i~~~~~~ 187 (351)
++. |+.|++||+++++.+. .+.+|...|.+++|+
T Consensus 257 ~s~---D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~s 333 (611)
T 1nr0_A 257 ASA---DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSS 333 (611)
T ss_dssp EET---TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EeC---CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEe
Confidence 999 9999999998775443 334688899999999
Q ss_pred CCCcEEEEEcCCCeEEEEEcCCCcEEEEee--------------------------------------------------
Q psy519 188 PCGKYLASGGEDGLVLTHELTTGRVISRFH-------------------------------------------------- 217 (351)
Q Consensus 188 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------------------------------------- 217 (351)
|++++|++++.|+.|++||+.+++....+.
T Consensus 334 pdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~ 413 (611)
T 1nr0_A 334 ADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQ 413 (611)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSC
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCC
Confidence 999999999999999999998765432210
Q ss_pred -------------------------------ccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee------eeee
Q psy519 218 -------------------------------LQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKI------GIGV 260 (351)
Q Consensus 218 -------------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~------~~~~ 260 (351)
..+...+.+++|+|+|++|++|+.|+.|++||+.+++.. +...
T Consensus 414 ~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~ 493 (611)
T 1nr0_A 414 PLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAE 493 (611)
T ss_dssp EEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSC
T ss_pred CcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCc
Confidence 001234678999999999999999999999999876432 2245
Q ss_pred cceeEEecCCceeeeeeccceeeEEEeeecee-----------CceEEEeeEEEEecCCceeeccEEEecCCccccceee
Q psy519 261 YPRCAAQPVGFEAATLAANSRVRTLREMHEIV-----------GPVVVVESFIVEIRPDKWYEANLIVLDDDLKECNLET 329 (351)
Q Consensus 261 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 329 (351)
+.+++|+|+|+.+++++.++.+ ++|+... +|...+.+ +.|+|++.++... ..|..+++|+++.
T Consensus 494 v~~v~fspdg~~las~s~d~~v---~~w~~~~~~~~~~~~~~~~H~~~V~~--v~fspdg~~lasg-s~D~~v~lW~~~~ 567 (611)
T 1nr0_A 494 ITSVAFSNNGAFLVATDQSRKV---IPYSVANNFELAHTNSWTFHTAKVAC--VSWSPDNVRLATG-SLDNSVIVWNMNK 567 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCE---EEEEGGGTTEESCCCCCCCCSSCEEE--EEECTTSSEEEEE-ETTSCEEEEETTC
T ss_pred eEEEEECCCCCEEEEEcCCCCE---EEEEcCCCCceeeeeeeeecccceeE--EEECCCCCEEEEE-ECCCcEEEEECCC
Confidence 7789999999999999888755 4555443 24445555 8899999987655 6889999999976
Q ss_pred ee
Q psy519 330 YS 331 (351)
Q Consensus 330 ~~ 331 (351)
..
T Consensus 568 ~~ 569 (611)
T 1nr0_A 568 PS 569 (611)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5e-45 Score=315.34 Aligned_cols=281 Identities=20% Similarity=0.245 Sum_probs=238.9
Q ss_pred cCCCCcc-ceEEeeecCCccccEEEEecCCCceEEEecCCc--------cCCCccceEEEEECCCCcE-EEEeCCCcEEE
Q psy519 6 LNHGDHK-HFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--------TSGHDMTVWSVEACSKGLA-LTGSRDTTARL 75 (351)
Q Consensus 6 ~~~~~~~-~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~v 75 (351)
...+|.. .|.+++|+|+ |++||+++.|+.|++|++... ..+|...|.+++|+|++.+ ++++.|+++++
T Consensus 10 ~~~~h~~~~v~~l~~sp~--g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPA--GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI 87 (345)
T ss_dssp EECCSTTSCEEEEEECTT--SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eecCCCCCcEEEEEECCC--CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEE
Confidence 3457777 9999999999 999999999999999998765 3689999999999999987 99999999999
Q ss_pred EeCCCC--eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc---eeEEeccCCCCeEEEEEccCCCEEEE
Q psy519 76 WSLEQM--YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA---SVRVFSDHVSPVLSIAFSPCGKYLAS 150 (351)
Q Consensus 76 w~~~~~--~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~ 150 (351)
|++.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||++++. .+..+..|...|.+++|+|++++|++
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEE
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEE
Confidence 998866 4567888999999999999999999999999999999998764 45667889999999999999999999
Q ss_pred EecCCCCCeEEEEEccCCc--eeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCC---------------cEE
Q psy519 151 GGTGSYDKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTG---------------RVI 213 (351)
Q Consensus 151 ~~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------------~~~ 213 (351)
++. |+.|++||+++++ ....+.+|...|.+++|+|++++|++++.|+.|++||.... +.+
T Consensus 168 ~s~---d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 168 ASY---DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EET---TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EeC---CCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 999 9999999998875 45678899999999999999999999999999999997432 223
Q ss_pred EEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--------e------eeeecceeEEecCCc-eeeeeec
Q psy519 214 SRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASK--------I------GIGVYPRCAAQPVGF-EAATLAA 278 (351)
Q Consensus 214 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~--------~------~~~~~~~~~~s~~~~-~~~~~~~ 278 (351)
..+...|...|.+++|+|++..|++++.|+.|++|+...... . +...+..++|+|++. .+++++.
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~ 324 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC
Confidence 334333667899999999999999999999999999875421 0 124577899999985 7888888
Q ss_pred cceeeEEEeeeceeCc
Q psy519 279 NSRVRTLREMHEIVGP 294 (351)
Q Consensus 279 ~~~~~~~~~~~~~~g~ 294 (351)
|+ .+++|+...++
T Consensus 325 Dg---~v~~W~~~~~~ 337 (345)
T 3fm0_A 325 DG---EVAFWKYQRPE 337 (345)
T ss_dssp TS---CEEEEEECC--
T ss_pred CC---cEEEEEecCCC
Confidence 77 45666655544
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-43 Score=301.37 Aligned_cols=279 Identities=23% Similarity=0.389 Sum_probs=244.5
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~ 79 (351)
...+|...|.+++|+|+ +++|++++.||.|++|+.... +.+|...|.+++|+|++++ ++++.|+.|++||++
T Consensus 18 ~~~gh~~~v~~~~~s~~--~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp EECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEcccCCcEEEEEECCC--CCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 35689999999999999 999999999999999999776 6789999999999999987 999999999999999
Q ss_pred CCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 80 QMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 80 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|..+|.+++|+|+++++++++. |+.
T Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~ 172 (312)
T 4ery_A 96 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY---DGL 172 (312)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSC
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC---CCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred EEEEEccCCceeEEec-cCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCC--CEEEEEEcCCCCEE
Q psy519 160 VRLWSITDGASVRVFS-DHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHE--PVTSLVWSVTGETL 236 (351)
Q Consensus 160 i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l 236 (351)
|++||+++++.+..+. .+..++..++|+|++++|++++.|+.|++||+++++.+..+...... .+......+++.+|
T Consensus 173 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (312)
T 4ery_A 173 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 252 (312)
T ss_dssp EEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEE
T ss_pred EEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEE
Confidence 9999999998877664 45678999999999999999999999999999999988877532221 22333344678999
Q ss_pred EEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeeec
Q psy519 237 VTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMHE 290 (351)
Q Consensus 237 ~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
++|+.||.|++||+.+++.+.. ..+..++|+|++..+++++. +.++.+++|+.
T Consensus 253 ~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~-~~d~~i~~W~~ 310 (312)
T 4ery_A 253 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL-ENDKTIKLWKS 310 (312)
T ss_dssp EECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEEC-TTTCCEEEEEC
T ss_pred EEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEc-cCCccEEEecC
Confidence 9999999999999999887754 44667999999999887763 12335666653
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-43 Score=306.46 Aligned_cols=276 Identities=21% Similarity=0.299 Sum_probs=234.9
Q ss_pred CcCCCCccceEEeee-----cC-CccccEEEEecCCCceEEEecCCc------------cCCCccceEEEEECCCCcE-E
Q psy519 5 HLNHGDHKHFIQNSF-----KP-ETVEDVLANLESQKNLQSRYLPYY------------TSGHDMTVWSVEACSKGLA-L 65 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~-----sp-~~~~~~l~~~~~~~~i~i~~~~~~------------~~~~~~~i~~~~~~~~~~~-~ 65 (351)
....+|...|.+++| +| + +++|++|+.|++|++|++... +.+|...|.+++|+|++.+ +
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d--~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENED--SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCC--CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeccchhhhhheeeEEEeecCCC--CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 346789999999999 77 8 999999999999999998642 5789999999999999988 9
Q ss_pred EEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe---ccCCCCeEEEEEc
Q psy519 66 TGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF---SDHVSPVLSIAFS 142 (351)
Q Consensus 66 ~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~ 142 (351)
+++.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+... ..... ..|...|.+++|+
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEEC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeec
Confidence 9999999999999999999999999999999999999999999999999999999743 33333 2688899999999
Q ss_pred cCC----------CEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCC-Cc
Q psy519 143 PCG----------KYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTT-GR 211 (351)
Q Consensus 143 ~~~----------~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~ 211 (351)
|++ .++++++. |+.|++|| ...+....+..|...|.+++|+|++++|++++.||.|++||+.+ ..
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~---d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGW---DGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEET---TSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS
T ss_pred cccccccccCCCCCEEEEEcC---CCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 987 78999998 99999999 45667778889999999999999999999999999999999954 33
Q ss_pred EEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee------------------eeecceeEEecCCcee
Q psy519 212 VISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIG------------------IGVYPRCAAQPVGFEA 273 (351)
Q Consensus 212 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~------------------~~~~~~~~~s~~~~~~ 273 (351)
....+ .+...|.+++|+|++.+++++ .|+.|++|++.+++... ...+..++|+|+|..+
T Consensus 248 ~~~~~--~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 324 (343)
T 2xzm_R 248 PQREF--DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKL 324 (343)
T ss_dssp CSEEE--ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCE
T ss_pred cceee--cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeE
Confidence 33333 245679999999999988765 57889999998765432 1235679999999999
Q ss_pred eeeeccceeeEEEeeeceeC
Q psy519 274 ATLAANSRVRTLREMHEIVG 293 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~g 293 (351)
++++.++ .+++|+..+|
T Consensus 325 ~sg~~Dg---~v~~w~~~~g 341 (343)
T 2xzm_R 325 FAGFTDG---VIRTFSFETS 341 (343)
T ss_dssp EEEETTS---EEEEEEEEEE
T ss_pred EEecCCc---eEEEEEEEcc
Confidence 9998887 5666665554
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4e-45 Score=320.05 Aligned_cols=279 Identities=22% Similarity=0.338 Sum_probs=245.0
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~ 79 (351)
...+|...|.+++|+|+ +++|++|+.|++|++||+... +..|...|.+++|+|++++ ++++.|+.+++|++.
T Consensus 61 ~l~gH~~~V~~~~~sp~--~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPE--KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EECCCSSCEEEEEECTT--SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred cccccccEEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 46789999999999999 999999999999999999876 6789999999999999988 999999999999987
Q ss_pred CCe-------eeEEeeCCCCCeEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCceeEEe-----ccCCCCeEEEEEcc-CC
Q psy519 80 QMY-------PLRIFVGHKQDVTCARFHPK-ITYIGTGSYDKAVRLWSITDGASVRVF-----SDHVSPVLSIAFSP-CG 145 (351)
Q Consensus 80 ~~~-------~~~~~~~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~~-~~ 145 (351)
+.. ....+.+|...+.++.|+|+ +..|++++.|++|++||+++++.+..+ .+|...|.+++|+| ++
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 218 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA 218 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC
Confidence 532 34567799999999999996 457999999999999999999988776 56889999999987 88
Q ss_pred CEEEEEecCCCCCeEEEEEcc-CCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC---
Q psy519 146 KYLASGGTGSYDKAVRLWSIT-DGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH--- 221 (351)
Q Consensus 146 ~~l~~~~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--- 221 (351)
+++++|+. |+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+.....
T Consensus 219 ~~l~sgs~---D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 219 NMFISGSC---DTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp CEEEEEET---TSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred CEEEEEEC---CCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc
Confidence 99999999 9999999998 4577888999999999999999999999999999999999999998877653222
Q ss_pred ---CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee---------eecceeEEecCCceeeeeeccceeeEEEeee
Q psy519 222 ---EPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI---------GVYPRCAAQPVGFEAATLAANSRVRTLREMH 289 (351)
Q Consensus 222 ---~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~---------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
..+.+++|+|+|++|++|+.||.|++||+..++.... ..+..++|+|+|..+++++.|+ .+++|+
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~---~i~iW~ 372 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK---NLKIWA 372 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS---CEEEEE
T ss_pred cccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC---CEEEEe
Confidence 2489999999999999999999999999988776532 4678899999999999998887 456666
Q ss_pred cee
Q psy519 290 EIV 292 (351)
Q Consensus 290 ~~~ 292 (351)
...
T Consensus 373 ~~~ 375 (380)
T 3iz6_a 373 FSG 375 (380)
T ss_dssp CCS
T ss_pred cCC
Confidence 543
No 15
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=303.88 Aligned_cols=239 Identities=16% Similarity=0.295 Sum_probs=227.4
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQ 80 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~ 80 (351)
..+|...|.+++|+|+ +.++++++.|+.|++||+... ...|...+.+++|+|++++ ++++.|+.|++|++++
T Consensus 76 l~gh~~~v~~~~~~~~--~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~ 153 (321)
T 3ow8_A 76 LEGHQLGVVSVDISHT--LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 153 (321)
T ss_dssp ECCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTT
T ss_pred eccCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCC
Confidence 5789999999999999 999999999999999999876 5577888999999999988 9999999999999999
Q ss_pred CeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeE
Q psy519 81 MYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAV 160 (351)
Q Consensus 81 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i 160 (351)
++....+..|...+.+++|+|++++|++++.||.|++||+++++.+..+.+|..+|.+++|+|++++|++++. |+.|
T Consensus 154 ~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~---dg~i 230 (321)
T 3ow8_A 154 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYI 230 (321)
T ss_dssp CSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECT---TSCE
T ss_pred CceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcC---CCeE
Confidence 9999899999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEe
Q psy519 161 RLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 161 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 240 (351)
++||+++++....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+. .|...|.+++|+|++++|++++
T Consensus 231 ~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 231 KIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF-DHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc-CCCCcEEEEEECCCCCEEEEEe
Confidence 999999999999999999999999999999999999999999999999999988875 5778999999999999999999
Q ss_pred CCCeEEEEeCC
Q psy519 241 LTGTVQFYGWP 251 (351)
Q Consensus 241 ~dg~i~i~~~~ 251 (351)
.||.|++||++
T Consensus 310 ~d~~i~vwd~p 320 (321)
T 3ow8_A 310 DDQEIHIYDCP 320 (321)
T ss_dssp TTCCEEEEECC
T ss_pred CCCeEEEEeCC
Confidence 99999999975
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-43 Score=301.98 Aligned_cols=276 Identities=20% Similarity=0.248 Sum_probs=226.1
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------c-CC-CccceEEEEECCCCcE-EEEeCCCcEE
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------T-SG-HDMTVWSVEACSKGLA-LTGSRDTTAR 74 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~-~~-~~~~i~~~~~~~~~~~-~~~~~d~~i~ 74 (351)
....+|..+|.+++|+|+ +||+++.|+.|++|++... + .+ |...|.+++|+|++.+ ++++.|++|+
T Consensus 8 ~~~~~h~~~v~~~~~s~~----~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG----ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEECCSSCEEEEEEETT----EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeeccCCCceeeeccCCC----EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 445789999999999966 8999999999999999763 2 34 9999999999999987 9999999999
Q ss_pred EEeCCC-------CeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC----ceeEEeccCCCCeEEEEEcc
Q psy519 75 LWSLEQ-------MYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG----ASVRVFSDHVSPVLSIAFSP 143 (351)
Q Consensus 75 vw~~~~-------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~ 143 (351)
+|+++. .+.+..+.+|...|.+++|+|++++|++++.|++|++||++.. +.+..+.+|...|.+++|+|
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 999853 3566778899999999999999999999999999999999532 45677888999999999999
Q ss_pred CCCEEEEEecCCCCCeEEEEEccCC--ceeEEeccCCCCEEEEEECCC--CcEEEEEcCCCeEEEEEcCCC--------c
Q psy519 144 CGKYLASGGTGSYDKAVRLWSITDG--ASVRVFSDHVSPVLSIAFSPC--GKYLASGGEDGLVLTHELTTG--------R 211 (351)
Q Consensus 144 ~~~~l~~~~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~--------~ 211 (351)
++++|++++. |+.|++||.+++ +.+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+ .
T Consensus 164 ~~~~l~s~s~---D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 164 SEALLASSSY---DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp SSSEEEEEET---TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred CCCEEEEEcC---CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 9999999999 999999999876 577888999999999999998 678999999999999998754 2
Q ss_pred EEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeee------e-ecceeEEec--CCceeeeeeccc
Q psy519 212 VISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSAS--KIGI------G-VYPRCAAQP--VGFEAATLAANS 280 (351)
Q Consensus 212 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--~~~~------~-~~~~~~~s~--~~~~~~~~~~~~ 280 (351)
....+...|...|.+++|++++ +|++++.||.|++|+..+++ .... . .+..++|+| ++..+++++.++
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred EeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence 3333332366889999999765 78999999999999998764 2211 1 566789999 688899998887
Q ss_pred eeeEEEeeece
Q psy519 281 RVRTLREMHEI 291 (351)
Q Consensus 281 ~~~~~~~~~~~ 291 (351)
.+++|+..
T Consensus 320 ---~v~~W~~~ 327 (330)
T 2hes_X 320 ---IVNFWSLE 327 (330)
T ss_dssp ---EEEEEEC-
T ss_pred ---cEEEEEec
Confidence 45666643
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-42 Score=303.76 Aligned_cols=271 Identities=25% Similarity=0.323 Sum_probs=232.2
Q ss_pred CCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCC------------------ccceEEEEECCCCcE-
Q psy519 9 GDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGH------------------DMTVWSVEACSKGLA- 64 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~------------------~~~i~~~~~~~~~~~- 64 (351)
+|...|.+++|||+ |++||+++ ++.+++|++..+ +..| ...|.+++|+|+|++
T Consensus 62 ~h~~~V~~v~fspd--g~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSND--GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTT--SSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECCC--CCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 58899999999999 99999986 689999998776 2222 224999999999988
Q ss_pred EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEcc-
Q psy519 65 LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSP- 143 (351)
Q Consensus 65 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~- 143 (351)
++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++....+. +...+.+++|+|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999998877776 567899999999
Q ss_pred CCCEEEEEecCCCCCeEEEEEccCCceeEEe-------ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCc-----
Q psy519 144 CGKYLASGGTGSYDKAVRLWSITDGASVRVF-------SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGR----- 211 (351)
Q Consensus 144 ~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----- 211 (351)
+++++++++. |+.|++||+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+++..
T Consensus 218 ~~~~l~~~s~---d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 218 DGKYIAAGSL---DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp TCCEEEEEET---TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred CCCEEEEEcC---CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence 8999999999 999999999999877766 5688999999999999999999999999999997642
Q ss_pred -------EEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEec------CCcee
Q psy519 212 -------VISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQP------VGFEA 273 (351)
Q Consensus 212 -------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~------~~~~~ 273 (351)
....+. .|...|.+++|+|++.+|++|+.|+.|++||+.+++.+.. ..+..++|+| ++..+
T Consensus 295 ~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l 373 (393)
T 1erj_A 295 KTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 373 (393)
T ss_dssp ------CEEEEEE-CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEE
T ss_pred cCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEE
Confidence 233332 5667899999999999999999999999999999987754 3455677765 67888
Q ss_pred eeeeccceeeEEEeeec
Q psy519 274 ATLAANSRVRTLREMHE 290 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~ 290 (351)
++++.|+. +++|+.
T Consensus 374 ~sgs~Dg~---i~iW~~ 387 (393)
T 1erj_A 374 ATGSGDCK---ARIWKY 387 (393)
T ss_dssp EEEETTSE---EEEEEE
T ss_pred EEECCCCc---EEECcc
Confidence 88888875 555553
No 18
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.5e-43 Score=309.99 Aligned_cols=241 Identities=25% Similarity=0.424 Sum_probs=226.9
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeC
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSL 78 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~ 78 (351)
....+|...|.+++|+|+ +++|++|+.|+.|++||+... +.+|...|.+++|+|++.+ ++++.|++|++||+
T Consensus 144 ~~l~~h~~~V~~v~~~~~--~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHS--GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp EEECCCSSCEEEEEECTT--SSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EEEeccCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 345789999999999999 999999999999999999876 6789999999999999987 99999999999999
Q ss_pred CCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccC--------------
Q psy519 79 EQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC-------------- 144 (351)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-------------- 144 (351)
.+++++..+.+|...|.++.++|++.+|++++.|+.|++||+++++....+..|...|.+++|+|+
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSET 301 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ------CCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeec
Q psy519 145 ------GKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHL 218 (351)
Q Consensus 145 ------~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 218 (351)
+.+|++++. |+.|++||+++++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+.
T Consensus 302 ~~~~~~g~~l~sgs~---D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~- 377 (410)
T 1vyh_C 302 KKSGKPGPFLLSGSR---DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN- 377 (410)
T ss_dssp ------CCEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE-
T ss_pred cccCCCCCEEEEEeC---CCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc-
Confidence 678999999 9999999999999999999999999999999999999999999999999999999888875
Q ss_pred cCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy519 219 QEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 219 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~ 251 (351)
.|...|.+++|+|++.+|++|+.||.|++|+++
T Consensus 378 ~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 577899999999999999999999999999863
No 19
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.6e-43 Score=302.09 Aligned_cols=238 Identities=20% Similarity=0.224 Sum_probs=208.3
Q ss_pred CccceEEeeecCCccccEEEEecCCCceEEEecCCc---------cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC
Q psy519 10 DHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 10 ~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~ 79 (351)
+...|.+++|+|+ + .|++++.||.|++||+.+. ..+|.+.|++++|+|+|++ ++|+.|++|++||++
T Consensus 81 ~~~~v~~~~~s~d--~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 81 TEAGVADLTWVGE--R-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp ESSCEEEEEEETT--T-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCEEEEEEeCC--C-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 4567999999999 6 5778899999999999876 3479999999999999988 999999999999999
Q ss_pred CCeeeEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCceeEEec--cCCCCeEEEEEccC-CCEEEEEecCC
Q psy519 80 QMYPLRIFVGHKQDVTCARFHPKIT-YIGTGSYDKAVRLWSITDGASVRVFS--DHVSPVLSIAFSPC-GKYLASGGTGS 155 (351)
Q Consensus 80 ~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~~~ 155 (351)
+++.+..+.+|...|.+++|+|++. +|++++.|++|++||+++++....+. .+...+.+++|+|+ ++++++|+.
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~-- 235 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE-- 235 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET--
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc--
Confidence 9999999999999999999999874 78999999999999999999887764 35567999999995 567888888
Q ss_pred CCCeEEEEEccCCceeEEeccCCCCEEEEEECCCC-cEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCC
Q psy519 156 YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCG-KYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGE 234 (351)
Q Consensus 156 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 234 (351)
|+.|++||+++++.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++... + ..|...|.+++|+|+++
T Consensus 236 -dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~-~~H~~~V~~v~~sp~~~ 312 (344)
T 4gqb_B 236 -NGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-S-QAHRDFVRDATWSPLNH 312 (344)
T ss_dssp -TSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-E-CCCSSCEEEEEECSSST
T ss_pred -CCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-E-cCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999999999999998 579999999999999999887654 3 36778999999999886
Q ss_pred -EEEEEeCCCeEEEEeCCCCce
Q psy519 235 -TLVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 235 -~l~~~~~dg~i~i~~~~~~~~ 255 (351)
+|++++.|++|++|++++...
T Consensus 313 ~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 313 SLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp TEEEEEETTSCEEEEECCC---
T ss_pred eEEEEEcCCCeEEEEECCCCCC
Confidence 677899999999999987643
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.6e-42 Score=315.76 Aligned_cols=303 Identities=26% Similarity=0.412 Sum_probs=263.2
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM 81 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~ 81 (351)
..+|...|.+++|+|+ +++|++++.|+.|++|+.... ..+|...|.+++|+|++.+ ++++.|+.|++||+..
T Consensus 258 ~~~~~~~v~~v~~~~d--~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~- 334 (577)
T 2ymu_A 258 LTGHSSSVNGVAFRPD--GQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG- 334 (577)
T ss_dssp ECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-
T ss_pred EecCCCCEEEEEEcCC--CCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-
Confidence 4678999999999999 999999999999999998766 6789999999999999987 9999999999999865
Q ss_pred eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEE
Q psy519 82 YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVR 161 (351)
Q Consensus 82 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~ 161 (351)
+.+..+.+|...+.+++|+|+++++++++.|+.+++||. +++.+..+..|...|.+++|+|++++|++++. |+.|+
T Consensus 335 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~---d~~v~ 410 (577)
T 2ymu_A 335 QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD---DKTVK 410 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEET---TSEEE
T ss_pred CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeC---CCEEE
Confidence 456678899999999999999999999999999999995 57788888899999999999999999999998 99999
Q ss_pred EEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeC
Q psy519 162 LWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSL 241 (351)
Q Consensus 162 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 241 (351)
+||. +++.+..+..|...|.+++|+|++++|++++.|+.|++||+ +++.+..+. .|...|.+++|+|++++|++++.
T Consensus 411 ~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~-~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 411 LWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE-CCSSCEEEEEECTTSCEEEEEET
T ss_pred EEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 9995 67788889999999999999999999999999999999996 566666665 57789999999999999999999
Q ss_pred CCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeeec-------eeCceEEEeeEEEEecCCc
Q psy519 242 TGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMHE-------IVGPVVVVESFIVEIRPDK 309 (351)
Q Consensus 242 dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~ 309 (351)
|+.|++||. +++.+.. ..+..++|+|+++.+++++.++. +++|+. ..||...+.+ +.|+||+
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~---v~lwd~~~~~~~~~~~h~~~v~~--~~fs~dg 561 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT---VKLWNRNGQLLQTLTGHSSSVWG--VAFSPDG 561 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE---EEEECTTSCEEEEEECCSSCEEE--EEECTTS
T ss_pred CCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE---EEEEeCCCCEEEEEcCCCCCEEE--EEEcCCC
Confidence 999999996 4555443 46678999999999999988874 566663 2334344444 7899999
Q ss_pred eeeccEEEecCCccccc
Q psy519 310 WYEANLIVLDDDLKECN 326 (351)
Q Consensus 310 ~~~~~~~~~~~~i~~~~ 326 (351)
.++... ..|..++.||
T Consensus 562 ~~l~s~-~~D~~i~~Wd 577 (577)
T 2ymu_A 562 QTIASA-SSDKTVKLWN 577 (577)
T ss_dssp SCEEEE-ETTSCEEEEC
T ss_pred CEEEEE-eCCCEEEEeC
Confidence 987653 5677888886
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.5e-42 Score=290.65 Aligned_cols=276 Identities=20% Similarity=0.224 Sum_probs=234.6
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA 124 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~ 124 (351)
+.+|.+.|++++|+|++.+ ++++.|++|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 88 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 5689999999999999988 999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCC-ceeEEeccCCCCEEEEEECC-CCcEEEEEcCCCeE
Q psy519 125 SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDG-ASVRVFSDHVSPVLSIAFSP-CGKYLASGGEDGLV 202 (351)
Q Consensus 125 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i 202 (351)
.+..+.+|...|.+++|+|++++|++++. |+.|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|+.|
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~---D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEET---TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECC---CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 99999999999999999999999999999 999999999987 45567889999999999999 67899999999999
Q ss_pred EEEEcCCCcEEEEeeccCCCCEEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeee
Q psy519 203 LTHELTTGRVISRFHLQEHEPVTSLVWSV--TGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAAT 275 (351)
Q Consensus 203 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~ 275 (351)
++||++++.....+...+...+..+.|+| ++.+|++|+.|+.|++||+++++.+.. ..+..++|+|++..+++
T Consensus 166 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp EEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred EEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEE
Confidence 99999988777766655667899999987 778999999999999999999987754 45567899999999999
Q ss_pred eeccceeeEEEeeeceeCceEEEee------EEEEecCCceeeccEEEecCCccccce
Q psy519 276 LAANSRVRTLREMHEIVGPVVVVES------FIVEIRPDKWYEANLIVLDDDLKECNL 327 (351)
Q Consensus 276 ~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~ 327 (351)
++.++ .+++|+..+++...... ..+.+.|++.........++.+..+++
T Consensus 246 ~s~Dg---~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 246 GSEDG---TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp EETTS---CEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEEC
T ss_pred EcCCC---eEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEe
Confidence 98887 56777776665432221 114566666432223334555555544
No 22
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.4e-41 Score=289.89 Aligned_cols=271 Identities=16% Similarity=0.215 Sum_probs=243.1
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----------cCCCccceEEEEECCCCcE-EEEeCCCcEEEE
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLW 76 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw 76 (351)
.+|...|.+++|+|+ +++|++++ +|.|++|++... ...|...|.+++|+|++++ ++++.|+.|++|
T Consensus 48 ~~h~~~v~~~~~~~~--~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 48 LNHGEVVCAVTISNP--TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp ECCSSCCCEEEECSS--SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred ccCCCceEEEEEecC--CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 368999999999999 99999998 999999999765 2278899999999999987 999999999999
Q ss_pred eCCCCe--eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecC
Q psy519 77 SLEQMY--PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTG 154 (351)
Q Consensus 77 ~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 154 (351)
|+++++ ....+..|...+.+++|+|+++++++++.||.|++||+++++.+..+..|...+.+++|+|+++++++++.
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 203 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL- 203 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec-
Confidence 999877 56677889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCC
Q psy519 155 SYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGE 234 (351)
Q Consensus 155 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 234 (351)
|+.|++||+++++.+..+ .+..++.+++|+|+++++++++.++.|++||+++++... + ..+...+.+++|+|+++
T Consensus 204 --dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 204 --DNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-L-HLHESCVLSLKFAYCGK 278 (337)
T ss_dssp --TSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-E-CCCSSCEEEEEECTTSS
T ss_pred --CCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-E-cCCccceeEEEECCCCC
Confidence 999999999999888777 467889999999999999999999999999999887653 3 25678999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeee----eecceeEEecCCceeeeeeccceeeEEEe
Q psy519 235 TLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPVGFEAATLAANSRVRTLRE 287 (351)
Q Consensus 235 ~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 287 (351)
+|++++.||.|++||+++++.+.. ..+..++|+|++..+++++.++.++.|++
T Consensus 279 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 279 WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999999887643 45678999999999999999886655543
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-41 Score=293.18 Aligned_cols=270 Identities=16% Similarity=0.237 Sum_probs=237.6
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA 124 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~ 124 (351)
+.+|.+.|++++|+|++.+ ++++.|++|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.+++||+.+.+
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC
Confidence 6789999999999999987 999999999999999999999999999999999999999999999999999999998753
Q ss_pred ----eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCC
Q psy519 125 ----SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDG 200 (351)
Q Consensus 125 ----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 200 (351)
....+.+|...|.++.|++++. +++++. |+.|++||+++++.+..+.+|...|.+++|+|+++++++++.|+
T Consensus 131 ~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~ 206 (340)
T 1got_B 131 GNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG---DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA 206 (340)
T ss_dssp BSCEEEEEEECCSSCEEEEEEEETTE-EEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CcceeEEEecCCCccEEEEEECCCCc-EEEEEC---CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCC
Confidence 4566788999999999998775 778888 99999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-------eecceeEEecCCcee
Q psy519 201 LVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-------GVYPRCAAQPVGFEA 273 (351)
Q Consensus 201 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------~~~~~~~~s~~~~~~ 273 (351)
.|++||+++++....+. .|...|.+++|+|++++|++|+.||.|++||+++++.+.. ..+..++|+|+|..+
T Consensus 207 ~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 207 SAKLWDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285 (340)
T ss_dssp CEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEE
Confidence 99999999999888875 5678999999999999999999999999999998876654 246789999999999
Q ss_pred eeeeccceeeEEEeeecee--------CceEEEeeEEEEecCCceeeccEEEecCCccccc
Q psy519 274 ATLAANSRVRTLREMHEIV--------GPVVVVESFIVEIRPDKWYEANLIVLDDDLKECN 326 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 326 (351)
++++.++. +++|+... ||...+.+ +.|+|++.+.... ..|..+++|+
T Consensus 286 ~~g~~d~~---i~vwd~~~~~~~~~~~~h~~~v~~--~~~s~dg~~l~s~-s~D~~i~iWd 340 (340)
T 1got_B 286 LAGYDDFN---CNVWDALKADRAGVLAGHDNRVSC--LGVTDDGMAVATG-SWDSFLKIWN 340 (340)
T ss_dssp EEEETTSE---EEEEETTTCCEEEEEECCSSCEEE--EEECTTSSCEEEE-ETTSCEEEEC
T ss_pred EEECCCCe---EEEEEcccCcEeeEeecCCCcEEE--EEEcCCCCEEEEE-cCCccEEecC
Confidence 99998875 55555433 34444444 7899999877654 5778888885
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.4e-41 Score=291.39 Aligned_cols=280 Identities=24% Similarity=0.311 Sum_probs=244.0
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----------cCCCccceEEEEECCCCcE-EEEeCCCcE
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------TSGHDMTVWSVEACSKGLA-LTGSRDTTA 73 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i 73 (351)
..++||.+.|++++|+|+. +++|++|+.|++|++|++... +.+|...|.+++|+|++.+ ++++.|+.|
T Consensus 32 ~tL~GH~~~V~~v~~sp~~-~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQF-PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEECCCSSCEEEEEECTTC-TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEECCccCCEEEEEEeCCC-CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3467999999999999971 579999999999999998764 5789999999999999988 999999999
Q ss_pred EEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCcee-EEeccCCCCeEEEEEccCC--CEEEE
Q psy519 74 RLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASV-RVFSDHVSPVLSIAFSPCG--KYLAS 150 (351)
Q Consensus 74 ~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~--~~l~~ 150 (351)
++|+............+...+....+++++++|++++.|+.+++||+...... ....+|...+.+++|++++ .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 99999999988888888999999999999999999999999999998765543 3456788999999999864 56788
Q ss_pred EecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEc
Q psy519 151 GGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWS 230 (351)
Q Consensus 151 ~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 230 (351)
++. |+.|++||+++++.+..+.+|..+|.+++|+|++++|++++.||.|++||+++.+.+..+. +...+..++|+
T Consensus 191 ~~~---d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~ 265 (340)
T 4aow_A 191 CGW---DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFS 265 (340)
T ss_dssp EET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--CSSCEEEEEEC
T ss_pred EcC---CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec--CCceEEeeecC
Confidence 888 9999999999999999999999999999999999999999999999999999999888764 45789999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeee--------------eecceeEEecCCceeeeeeccceeeEEEeeeceeCc
Q psy519 231 VTGETLVTGSLTGTVQFYGWPSASKIGI--------------GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGP 294 (351)
Q Consensus 231 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~--------------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~ 294 (351)
|++.++ +++.|+.|++||++++..+.. ..+..++|+|+|..+++++.|+ .+++|+..+|.
T Consensus 266 ~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg---~v~iW~~~tGt 339 (340)
T 4aow_A 266 PNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN---LVRVWQVTIGT 339 (340)
T ss_dssp SSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS---CEEEEEEEC--
T ss_pred CCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC---EEEEEeCCCcC
Confidence 988755 455699999999998765532 3567799999999999988887 57788877774
No 25
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.8e-42 Score=321.45 Aligned_cols=275 Identities=23% Similarity=0.309 Sum_probs=240.6
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----------cCCCccceEEEEECCCCcE-EEEeCCCcEE
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------TSGHDMTVWSVEACSKGLA-LTGSRDTTAR 74 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~ 74 (351)
...+|...|.+++|+|+. +++|++|+.|++|++|++... +.+|...|.+++|+|++.+ ++|+.|++|+
T Consensus 377 ~l~~H~~~V~~v~~~~~~-~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDN-ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEECCSSCEEEEECCTTC-CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hcccCCceeEEEEecCCC-CCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 356899999999999971 479999999999999998753 5689999999999999988 9999999999
Q ss_pred EEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe---ccCCCCeEEEEEccCC--CEEE
Q psy519 75 LWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF---SDHVSPVLSIAFSPCG--KYLA 149 (351)
Q Consensus 75 vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~--~~l~ 149 (351)
+||+.+++....+.+|...|.+++|+|++++|++++.|++|++||+......... .+|...|.+++|+|++ ..++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 9999999999999999999999999999999999999999999998755433332 4588899999999986 5799
Q ss_pred EEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEE
Q psy519 150 SGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVW 229 (351)
Q Consensus 150 ~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 229 (351)
+++. |+.|++||+++++....+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+ .+...+.+++|
T Consensus 536 s~s~---d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~ 610 (694)
T 3dm0_A 536 SASW---DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL--EANSVIHALCF 610 (694)
T ss_dssp EEET---TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC--BCSSCEEEEEE
T ss_pred EEeC---CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe--cCCCcEEEEEE
Confidence 9998 999999999999999999999999999999999999999999999999999999887665 45678999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceeeee------------------------ecceeEEecCCceeeeeeccceeeEE
Q psy519 230 SVTGETLVTGSLTGTVQFYGWPSASKIGIG------------------------VYPRCAAQPVGFEAATLAANSRVRTL 285 (351)
Q Consensus 230 ~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~------------------------~~~~~~~s~~~~~~~~~~~~~~~~~~ 285 (351)
+|++.+|++++ ++.|++||+++++.+... .+.+++|+|+|..+++++.++. +
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~---i 686 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGV---I 686 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSE---E
T ss_pred cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCe---E
Confidence 99999888775 567999999998766432 1456889999999999888874 5
Q ss_pred Eeeec
Q psy519 286 REMHE 290 (351)
Q Consensus 286 ~~~~~ 290 (351)
++|+.
T Consensus 687 ~iW~i 691 (694)
T 3dm0_A 687 RVWGI 691 (694)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 55553
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-41 Score=292.21 Aligned_cols=308 Identities=17% Similarity=0.192 Sum_probs=260.8
Q ss_pred CCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCe
Q psy519 9 GDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMY 82 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~ 82 (351)
-+..+|.+++|+|+ |++++++..++.+..|..... ..+|...|.+++|+|++++ ++++ |+.|++|++.+++
T Consensus 7 ~~~~~v~~~~~s~d--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~ 83 (337)
T 1gxr_A 7 MGSKPAYSFHVTAD--GQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPG 83 (337)
T ss_dssp EEEEECCEEEECSS--SCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTT
T ss_pred ccCCceeEEEECCC--CCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCC
Confidence 35678999999999 999999888887777765554 5579999999999999998 6666 9999999998765
Q ss_pred ee---EEee--CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc--eeEEeccCCCCeEEEEEccCCCEEEEEecCC
Q psy519 83 PL---RIFV--GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSPCGKYLASGGTGS 155 (351)
Q Consensus 83 ~~---~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 155 (351)
.. ..+. .|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...+.+++|+|+++++++++.
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-- 161 (337)
T 1gxr_A 84 NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-- 161 (337)
T ss_dssp CCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET--
T ss_pred ceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC--
Confidence 33 3333 788999999999999999999999999999999877 56667788999999999999999999998
Q ss_pred CCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCE
Q psy519 156 YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGET 235 (351)
Q Consensus 156 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 235 (351)
|+.|++||+++++.+..+..|...+.+++|+|+++++++++.||.|++||+++++.+..+ .+...+.+++|+|++++
T Consensus 162 -dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~--~~~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 162 -DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH--DFTSQIFSLGYCPTGEW 238 (337)
T ss_dssp -TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEECTTSSE
T ss_pred -CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee--cCCCceEEEEECCCCCE
Confidence 999999999999999999999999999999999999999999999999999999888776 45678999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeee----eecceeEEecCCceeeeeeccceeeEEEeeeceeCceEEEee-----EEEEec
Q psy519 236 LVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVVVES-----FIVEIR 306 (351)
Q Consensus 236 l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~ 306 (351)
|++++.|+.|++||+.+++.... ..+..++|+|++..+++++.++ .+++|+..+++...... ..+.|+
T Consensus 239 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~~~~~~~~~~~v~~~~~s 315 (337)
T 1gxr_A 239 LAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN---LLNAWRTPYGASIFQSKESSSVLSCDIS 315 (337)
T ss_dssp EEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTS---EEEEEETTTCCEEEEEECSSCEEEEEEC
T ss_pred EEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCC---cEEEEECCCCeEEEEecCCCcEEEEEEC
Confidence 99999999999999998876543 4567899999999999888877 56777776665443221 125789
Q ss_pred CCceeeccEEEecCCcccccee
Q psy519 307 PDKWYEANLIVLDDDLKECNLE 328 (351)
Q Consensus 307 ~~~~~~~~~~~~~~~i~~~~~~ 328 (351)
|++.+.... ..+..++.|++.
T Consensus 316 ~~~~~l~~~-~~dg~i~iw~~~ 336 (337)
T 1gxr_A 316 VDDKYIVTG-SGDKKATVYEVI 336 (337)
T ss_dssp TTSCEEEEE-ETTSCEEEEEEE
T ss_pred CCCCEEEEe-cCCCeEEEEEEe
Confidence 998876543 467778888763
No 27
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5e-41 Score=287.10 Aligned_cols=273 Identities=22% Similarity=0.298 Sum_probs=235.0
Q ss_pred cCCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCC-----CeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q psy519 46 TSGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQ-----MYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLW 118 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~-----~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~ 118 (351)
+.+|.+.|++++|+|++ .+ ++++.|++|++|++.. +.++..+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 67899999999999965 55 9999999999999864 34567889999999999999999999999999999999
Q ss_pred eCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCC------CcE
Q psy519 119 SITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC------GKY 192 (351)
Q Consensus 119 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~------~~~ 192 (351)
|+.+++.+..+.+|...|.+++|+|+++++++++. |+.|++||++ ++.+..+.+|...+.++.|+|. +..
T Consensus 93 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 93 DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR---DKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET---TSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred ECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 99999999999999999999999999999999999 9999999986 5677788899999999999984 458
Q ss_pred EEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eecceeEEec
Q psy519 193 LASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQP 268 (351)
Q Consensus 193 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~ 268 (351)
+++++.|+.|++||+++.+....+. .|...|.+++|+|++++|++++.||.|++||+.+++.+.. ..+..++|+|
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 247 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFI-GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSP 247 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECS
T ss_pred EEEEeCCCEEEEEECCcchhheeec-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcC
Confidence 9999999999999999988877765 6778999999999999999999999999999999887654 4567899999
Q ss_pred CCceeeeeeccceeeEEEeeeceeCceE----------------EEeeEEEEecCCceeeccEEEecCCccccceeee
Q psy519 269 VGFEAATLAANSRVRTLREMHEIVGPVV----------------VVESFIVEIRPDKWYEANLIVLDDDLKECNLETY 330 (351)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 330 (351)
++..++++..++ +++|+...+... .+.+ +.|+|++.++... ..+..++.|++.+.
T Consensus 248 ~~~~la~~~~~~----i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~spdg~~l~sg-~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 248 NRYWLAAATATG----IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVS--LAWSADGQTLFAG-YTDNVIRVWQVMTA 318 (319)
T ss_dssp SSSEEEEEETTE----EEEEEETTEEEEEEECCCCTTCCGGGCCCEEE--EEECTTSSEEEEE-ETTSCEEEEEEEEC
T ss_pred CCCEEEEEcCCC----cEEEEeCcCeeeeccCccccccccCcCcceeE--EEECCCCCEEEEe-ecCceEEEEEEeec
Confidence 999988776553 455554332211 1223 7899999987654 67888999998763
No 28
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-42 Score=306.80 Aligned_cols=309 Identities=12% Similarity=0.144 Sum_probs=258.1
Q ss_pred CccceEEeeecCCcccc-EEEEe----------cCCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCC
Q psy519 10 DHKHFIQNSFKPETVED-VLANL----------ESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRD 70 (351)
Q Consensus 10 ~~~~v~~~~~sp~~~~~-~l~~~----------~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d 70 (351)
+..+|.+++|+|+ ++ +|+++ +.|+.|++|++... ...|...|.+++|+|++.+ ++++.|
T Consensus 11 ~~~~v~~~~~sp~--g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 88 (416)
T 2pm9_A 11 EFSRTATFAWSHD--KIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN 88 (416)
T ss_dssp EEEESCBCCBCSS--SSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS
T ss_pred hhhhcceEeeCCC--CCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC
Confidence 4568899999999 87 89999 88999999999865 3468899999999999987 899999
Q ss_pred CcEEEEeCCC----CeeeEEeeCCCCCeEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCc------eeE---EeccCCCCe
Q psy519 71 TTARLWSLEQ----MYPLRIFVGHKQDVTCARFHPK-ITYIGTGSYDKAVRLWSITDGA------SVR---VFSDHVSPV 136 (351)
Q Consensus 71 ~~i~vw~~~~----~~~~~~~~~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~------~~~---~~~~~~~~i 136 (351)
+.|++|++.+ .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++ ... .+..|...|
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV 168 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC
T ss_pred CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCe
Confidence 9999999987 4577888899999999999998 8999999999999999999876 332 235688999
Q ss_pred EEEEEccC-CCEEEEEecCCCCCeEEEEEccCCceeEEeccC------CCCEEEEEECCCC-cEEEEEcCCC---eEEEE
Q psy519 137 LSIAFSPC-GKYLASGGTGSYDKAVRLWSITDGASVRVFSDH------VSPVLSIAFSPCG-KYLASGGEDG---LVLTH 205 (351)
Q Consensus 137 ~~~~~~~~-~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~dg---~i~i~ 205 (351)
.+++|+|+ +.++++++. |+.|++||+++++.+..+..+ ...+.+++|+|++ .++++++.|+ .|++|
T Consensus 169 ~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGS---SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp CEEEECSSCTTEEEEESS---SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred eEEEeCCCCCcEEEEEcC---CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 99999998 789999988 999999999999988888776 7899999999987 6899999998 99999
Q ss_pred EcCCC-cEEEEeeccCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCC-ceeeeee
Q psy519 206 ELTTG-RVISRFHLQEHEPVTSLVWSV-TGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVG-FEAATLA 277 (351)
Q Consensus 206 d~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~-~~~~~~~ 277 (351)
|++++ .....+...|...|.+++|+| ++++|++++.||.|++||+.+++.+.. ..+..++|+|++ ..+++++
T Consensus 246 d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 246 DLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp ETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC
T ss_pred eCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe
Confidence 99986 444444324678999999999 999999999999999999999887764 456789999999 7888888
Q ss_pred ccceeeEEEeeeceeCceE-------------------------------------------EEeeEEEEecCCceeecc
Q psy519 278 ANSRVRTLREMHEIVGPVV-------------------------------------------VVESFIVEIRPDKWYEAN 314 (351)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~-------------------------------------------~~~~~~~~~~~~~~~~~~ 314 (351)
.++. +++|+...+... .+. ...|+|++.++..
T Consensus 326 ~d~~---i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~la~ 400 (416)
T 2pm9_A 326 FDNK---IEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSP--AAHWAFGGKLVQI 400 (416)
T ss_dssp SSSE---EEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSC--CCEEETTTEEECB
T ss_pred cCCc---EEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCcc--ceEEeeCCeEEEE
Confidence 8775 555555433211 111 2578899888765
Q ss_pred EEEecCCccccceee
Q psy519 315 LIVLDDDLKECNLET 329 (351)
Q Consensus 315 ~~~~~~~i~~~~~~~ 329 (351)
. ..+..+++|++.+
T Consensus 401 ~-~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 401 T-PDGKGVSITNPKI 414 (416)
T ss_dssp C-TTSSCBCCBCCCC
T ss_pred e-CCCCeEEEEEecc
Confidence 4 3577899998865
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.9e-40 Score=306.03 Aligned_cols=305 Identities=25% Similarity=0.377 Sum_probs=262.6
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM 81 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~ 81 (351)
..+|...|.+++|+|+ +++|++++.|+.|++|+.... +.+|...|.+++|+|++.. ++++.|+.|++|+.. +
T Consensus 217 ~~~~~~~v~~~~~s~d--g~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~ 293 (577)
T 2ymu_A 217 LTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-G 293 (577)
T ss_dssp EECCSSCEEEEEECTT--SSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-S
T ss_pred EecCCCCEEEEEECCC--CCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-C
Confidence 4578899999999999 999999999999999998765 6789999999999999987 999999999999965 5
Q ss_pred eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEE
Q psy519 82 YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVR 161 (351)
Q Consensus 82 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~ 161 (351)
+....+.+|...|.+++|+|+++.+++++.|+.|++||+. ++.+..+..|...+.+++|+|+++++++++. |+.|+
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---dg~v~ 369 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTVK 369 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeC---CCEEE
Confidence 6778888999999999999999999999999999999976 4556777889999999999999999999998 99999
Q ss_pred EEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeC
Q psy519 162 LWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSL 241 (351)
Q Consensus 162 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 241 (351)
+||. +++.+..+..|...|.+++|+|++++|++++.|+.|++||. +++.+..+. .|...|.+++|+|++++|++++.
T Consensus 370 ~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 370 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEE-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEec-CCCCCeEEEEECCCCCEEEEEcC
Confidence 9995 67888889999999999999999999999999999999996 567777665 57789999999999999999999
Q ss_pred CCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeeec-------eeCceEEEeeEEEEecCCc
Q psy519 242 TGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMHE-------IVGPVVVVESFIVEIRPDK 309 (351)
Q Consensus 242 dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~ 309 (351)
|+.|++||... +.+.. ..+..++|+|++..+++++.++. +++|+. ..++...+.+ +.|+|++
T Consensus 447 d~~v~~w~~~~-~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~---i~iw~~~~~~~~~~~~h~~~v~~--l~~s~dg 520 (577)
T 2ymu_A 447 DKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT---VKLWNRNGQLLQTLTGHSSSVRG--VAFSPDG 520 (577)
T ss_dssp TSEEEEEETTS-CEEEEEECCSSCEEEEEECTTSCEEEEEETTSE---EEEEETTSCEEEEEECCSSCEEE--EEECTTS
T ss_pred CCEEEEEECCC-CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE---EEEEcCCCCEEEEEeCCCCCEEE--EEEcCCC
Confidence 99999999754 43332 45678999999999999988875 455553 2233333444 7899999
Q ss_pred eeeccEEEecCCcccccee
Q psy519 310 WYEANLIVLDDDLKECNLE 328 (351)
Q Consensus 310 ~~~~~~~~~~~~i~~~~~~ 328 (351)
.++... ..+..++.|+..
T Consensus 521 ~~l~s~-~~dg~v~lwd~~ 538 (577)
T 2ymu_A 521 QTIASA-SDDKTVKLWNRN 538 (577)
T ss_dssp SCEEEE-ETTSEEEEECTT
T ss_pred CEEEEE-ECcCEEEEEeCC
Confidence 987654 567789999853
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-40 Score=288.28 Aligned_cols=277 Identities=19% Similarity=0.278 Sum_probs=247.5
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQ 80 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~ 80 (351)
..+|...|.+++|+|+ +++|++++.||.|++|++... +.+|...|.+++|+|++.+ ++++.|+.|++||+.+
T Consensus 28 l~~h~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKE--GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EECCSSCEEEEEECTT--SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EEEeeceEEEEEEcCC--CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 4689999999999999 999999999999999999877 7789999999999999987 9999999999999999
Q ss_pred CeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCc-----------eeEEeccCCC--CeEEEEEc
Q psy519 81 MYPLRIFVGHKQDVTCARFHPKITYIGTGSYD-----KAVRLWSITDGA-----------SVRVFSDHVS--PVLSIAFS 142 (351)
Q Consensus 81 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-----------~~~~~~~~~~--~i~~~~~~ 142 (351)
++.+..+. +...+.+++|+|+++++++++.+ +.|++||+.... ....+..+.. .+.+++|+
T Consensus 106 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 106 GQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp CCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred CcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 99988887 88899999999999999999998 999999997654 2334444555 89999999
Q ss_pred cCCCEEEEEecCCCCCeEEEEEccC-CceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC
Q psy519 143 PCGKYLASGGTGSYDKAVRLWSITD-GASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH 221 (351)
Q Consensus 143 ~~~~~l~~~~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 221 (351)
|+++++++++. |+.|++||+++ ++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +.
T Consensus 185 ~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~ 259 (369)
T 3zwl_B 185 TKGKYIIAGHK---DGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--TD 259 (369)
T ss_dssp GGGCEEEEEET---TSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CS
T ss_pred CCCCEEEEEcC---CCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--CC
Confidence 99999999998 99999999998 78888888999999999999999999999999999999999999888875 56
Q ss_pred CCEEEEEEcCCCCEEEEEeCCC--------------eEEEEeCCCCceeee-----eecceeEEecCCceeeeeecccee
Q psy519 222 EPVTSLVWSVTGETLVTGSLTG--------------TVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRV 282 (351)
Q Consensus 222 ~~v~~~~~~~~~~~l~~~~~dg--------------~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~ 282 (351)
..+..++|+|+++++++++.++ .+++||..+++.+.. ..+..++|+|++..+++++.++.
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~- 338 (369)
T 3zwl_B 260 CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGF- 338 (369)
T ss_dssp SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-
T ss_pred CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCe-
Confidence 7899999999999999999988 899999999887754 55678999999999999988874
Q ss_pred eEEEeeeceeCc
Q psy519 283 RTLREMHEIVGP 294 (351)
Q Consensus 283 ~~~~~~~~~~g~ 294 (351)
+++|+...+.
T Consensus 339 --v~iw~~~~~~ 348 (369)
T 3zwl_B 339 --IRLHHFEKSY 348 (369)
T ss_dssp --EEEEEECHHH
T ss_pred --EEEEECcccc
Confidence 5666655443
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.8e-41 Score=284.34 Aligned_cols=243 Identities=18% Similarity=0.271 Sum_probs=210.5
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCC--CcE-EEEeCCCcEE
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSK--GLA-LTGSRDTTAR 74 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~--~~~-~~~~~d~~i~ 74 (351)
.+..+|...|.+++|+|+ |++||+++.|++|++|++... +.+|.++|++++|+++ +.+ ++++.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~--g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYY--GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTT--SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECCC--CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 356789999999999999 999999999999999998642 6789999999999864 666 9999999999
Q ss_pred EEeCCCCe--eeEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCcEEEEeCCCCc--eeEEeccCCCCeEEEEEccC----
Q psy519 75 LWSLEQMY--PLRIFVGHKQDVTCARFHPK--ITYIGTGSYDKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSPC---- 144 (351)
Q Consensus 75 vw~~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~---- 144 (351)
+||+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998774 55667889999999999997 8899999999999999998763 24566789999999999997
Q ss_pred ---------CCEEEEEecCCCCCeEEEEEccCCc----eeEEeccCCCCEEEEEECCCC---cEEEEEcCCCeEEEEEcC
Q psy519 145 ---------GKYLASGGTGSYDKAVRLWSITDGA----SVRVFSDHVSPVLSIAFSPCG---KYLASGGEDGLVLTHELT 208 (351)
Q Consensus 145 ---------~~~l~~~~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~ 208 (351)
+++|++++. |+.|++||+++++ ....+.+|...|.+++|+|++ .+|++++.|+.|++||++
T Consensus 161 ~~~~~~~~~~~~l~sgs~---D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ---------CCEEEEEET---TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccCCCCCCcceEEEEcC---CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 579999999 9999999998876 566788999999999999984 899999999999999998
Q ss_pred CCc--EE-EEee-ccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy519 209 TGR--VI-SRFH-LQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 209 ~~~--~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~ 252 (351)
+.. .. ..+. ..+...|.+++|+|++++|++++.||.|++|+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 743 11 2221 23457899999999999999999999999999763
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.7e-41 Score=300.88 Aligned_cols=269 Identities=17% Similarity=0.183 Sum_probs=230.1
Q ss_pred eEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEe
Q psy519 14 FIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIF 87 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~ 87 (351)
+.+++|+|+ +++|++++.|+.+++|++... ...| ..+....|++++.+ ++++.|+.|++||+++++....+
T Consensus 59 ~~~~~~s~~--g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 59 GKGNTFEKV--GSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CTTCEEEEE--ETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred ccceeeeec--CCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 457899999 999999999999999999876 3334 44555578999987 99999999999999999988888
Q ss_pred eCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC
Q psy519 88 VGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD 167 (351)
Q Consensus 88 ~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~ 167 (351)
.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++. |+.|++||+++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~ 212 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASL---DGTIRLWECGT 212 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEEEETTT
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcC---CCcEEEeECCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CceeEEecc---CCCCEE---------------------EEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCC
Q psy519 168 GASVRVFSD---HVSPVL---------------------SIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEP 223 (351)
Q Consensus 168 ~~~~~~~~~---~~~~i~---------------------~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 223 (351)
++.+..+.. +...+. +++|+|++++|++++.||.|++||+++++.+..+...+...
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 998888864 333444 45568899999999999999999999999888886667789
Q ss_pred EEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCce-eee-----eecceeEEecCCceeeeeeccceeeEEEeeece
Q psy519 224 VTSLVWSVTGE-TLVTGSLTGTVQFYGWPSASK-IGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMHEI 291 (351)
Q Consensus 224 v~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~-~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
+.+++|+|+++ +|++|+.||.|++||+++++. +.. .......++|++..+++++.++. +++|+..
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~---v~iw~~~ 364 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTS---IKLDIIS 364 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEE---EEEEEEC
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCcc---EEEEecc
Confidence 99999999999 999999999999999998753 322 12223346678888888887775 5555543
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-41 Score=296.08 Aligned_cols=306 Identities=13% Similarity=0.166 Sum_probs=258.8
Q ss_pred CCCccceEEeeecCCcccc-EEEEecCCCceEEEec----CCcc-----------C----------CCccceEEEEECCC
Q psy519 8 HGDHKHFIQNSFKPETVED-VLANLESQKNLQSRYL----PYYT-----------S----------GHDMTVWSVEACSK 61 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~----~~~~-----------~----------~~~~~i~~~~~~~~ 61 (351)
+.|..+|.+++|+|+ ++ +||+++.|+.|++|++ .... . +|...|.+++|+|+
T Consensus 42 ~~~~~~v~~~~~s~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPL--DESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp EEECSCCSEEEECSS--CTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred eeccCceEEEEECCC--CCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 345689999999999 99 9999999999999999 4331 1 26789999999999
Q ss_pred CcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCC-----
Q psy519 62 GLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSP----- 135 (351)
Q Consensus 62 ~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----- 135 (351)
+.+ ++++.|+.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+...
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 988 9999999999999 667888889999999999999999999999999999999999999998888777666
Q ss_pred ----------eEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEE
Q psy519 136 ----------VLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTH 205 (351)
Q Consensus 136 ----------i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 205 (351)
+.+++|+|++ .+++++. ++.|++||+++++.+..+..|..++.+++|+|++++|++++.||.|++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~ 274 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDD-KFVIPGP---KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIW 274 (425)
T ss_dssp -------CCCBSCCEEEETT-EEEEECG---GGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eccccCCcceeeEEEEcCCC-EEEEEcC---CCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 8999999975 5777777 9999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccc
Q psy519 206 ELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANS 280 (351)
Q Consensus 206 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~ 280 (351)
|+++++....+. .+...+.+++|+|++ ++++++.|+.|++||+.+++.+.. ..+..++|+|++..+++++.++
T Consensus 275 d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 275 HGGNGNSQNCFY-GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp CSSSBSCSEEEC-CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS
T ss_pred ECCCCccceEec-CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC
Confidence 999988887775 567899999999999 999999999999999999887754 4566899999999999999887
Q ss_pred eeeEEEeeeceeCc--------------------e--------E--EEeeEEEEecCCceeeccEEEecCCcccccee
Q psy519 281 RVRTLREMHEIVGP--------------------V--------V--VVESFIVEIRPDKWYEANLIVLDDDLKECNLE 328 (351)
Q Consensus 281 ~~~~~~~~~~~~g~--------------------~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 328 (351)
.+. +|+...+. . . .+.. +.|+|++.++... ..+..+..|+++
T Consensus 353 ~i~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~~~~l~~~-~~dg~i~iw~~~ 424 (425)
T 1r5m_A 353 QVN---VYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFD--LSWNCAGNKISVA-YSLQEGSVVAIP 424 (425)
T ss_dssp CEE---EEECHHHHC--------------CEECCEEEEECCTTCCCCEEE--EEECTTSSEEEEE-ESSSCCEEEECC
T ss_pred eEE---EEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEE--EEccCCCceEEEE-ecCceEEEEeec
Confidence 554 45444333 1 1 3333 6789998876544 577789988874
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-41 Score=293.81 Aligned_cols=239 Identities=19% Similarity=0.259 Sum_probs=208.2
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc---------cCCCccceEEEEECCCCcE-EEEeCCCcEEEEe
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWS 77 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~ 77 (351)
.+|...|.+++|+|+ +.+| +++.||.|++||+... ..+|...|++++|+|++++ ++++.|+.|++||
T Consensus 91 ~~~~~~V~~~~~s~d--~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 91 VQTEAGVTDVAWVSE--KGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EECSSCEEEEEEETT--TEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred CCCCCCEEEEEEcCC--CCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 357888999999999 8755 4668999999998775 3478999999999999987 9999999999999
Q ss_pred CCCCeeeEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCceeEEe--ccCCCCeEEEEEccC-CCEEEEEec
Q psy519 78 LEQMYPLRIFVGHKQDVTCARFHPKIT-YIGTGSYDKAVRLWSITDGASVRVF--SDHVSPVLSIAFSPC-GKYLASGGT 153 (351)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~-~~~l~~~~~ 153 (351)
+++++.+..+.+|...|.+++|+|++. ++++++.|+.|++||+++++....+ ..+...+.+++|+|+ +.+|++++.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 999999999999999999999999875 7899999999999999998876654 346678999999997 467888888
Q ss_pred CCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCC-cEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcC-
Q psy519 154 GSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCG-KYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSV- 231 (351)
Q Consensus 154 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~- 231 (351)
|+.|++||+++++.+..+..|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ .|...|++++|+|
T Consensus 248 ---d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--~H~~~V~~vafsP~ 322 (357)
T 4g56_B 248 ---TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL--SHRDFVTGVAWSPL 322 (357)
T ss_dssp ---SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--CCSSCEEEEEECSS
T ss_pred ---ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--CCCCCEEEEEEeCC
Confidence 9999999999999999999999999999999987 57899999999999999998877654 6778999999998
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCc
Q psy519 232 TGETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 232 ~~~~l~~~~~dg~i~i~~~~~~~ 254 (351)
++++|++++.||+|++|++++..
T Consensus 323 d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 323 DHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp STTEEEEEETTSCEEEEECC---
T ss_pred CCCEEEEEcCCCeEEEEECCCCC
Confidence 79999999999999999997643
No 35
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-40 Score=287.67 Aligned_cols=271 Identities=17% Similarity=0.267 Sum_probs=236.7
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG- 123 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~- 123 (351)
+.+|...|++++|+|++.+ ++|+.|++|++||..+++....+..|...|.+++|+|++..+++++.|+.+++|++...
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 6789999999999999987 99999999999999999988889899999999999999999999999999999998643
Q ss_pred -----ceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECC--CCcEEEEE
Q psy519 124 -----ASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSP--CGKYLASG 196 (351)
Q Consensus 124 -----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~ 196 (351)
.....+..|...|.+++|+|++..|++++. |+.|++||+++++.+..+.+|...+.+++|+| ++++|++|
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG---DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEE
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEE
Confidence 345666789999999999999999999999 99999999999999999999999999999988 56899999
Q ss_pred cCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-------eecceeEEecC
Q psy519 197 GEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-------GVYPRCAAQPV 269 (351)
Q Consensus 197 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------~~~~~~~~s~~ 269 (351)
+.||.|++||+++++.+..+. .|...|.+++|+|++++|++++.|+.|++||++.++.+.. ..+..++|+|+
T Consensus 217 s~Dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 217 GCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp ETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred eCCCeEEEEECCCCcEEEEec-CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCC
Confidence 999999999999999888875 5678999999999999999999999999999998876543 23457899999
Q ss_pred CceeeeeeccceeeEEEeeeceeC--------ceEEEeeEEEEecCCceeeccEEEecCCccccc
Q psy519 270 GFEAATLAANSRVRTLREMHEIVG--------PVVVVESFIVEIRPDKWYEANLIVLDDDLKECN 326 (351)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 326 (351)
+..+++++.++. +++|+..++ |...+.+ +.|+|++.++... ..|..++.|+
T Consensus 296 g~~l~~g~~d~~---i~vwd~~~~~~~~~l~~h~~~v~~--l~~spdg~~l~sg-s~D~~v~vW~ 354 (354)
T 2pbi_B 296 GRLLFAGYNDYT---INVWDVLKGSRVSILFGHENRVST--LRVSPDGTAFCSG-SWDHTLRVWA 354 (354)
T ss_dssp SSEEEEEETTSC---EEEEETTTCSEEEEECCCSSCEEE--EEECTTSSCEEEE-ETTSEEEEEC
T ss_pred CCEEEEEECCCc---EEEEECCCCceEEEEECCCCcEEE--EEECCCCCEEEEE-cCCCCEEecC
Confidence 999999988875 555665444 3344444 7899999887654 5677787774
No 36
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.8e-40 Score=279.28 Aligned_cols=276 Identities=18% Similarity=0.316 Sum_probs=237.3
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA 124 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~ 124 (351)
+.+|...|++++|+|++++ ++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 5689999999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEE
Q psy519 125 SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLT 204 (351)
Q Consensus 125 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 204 (351)
.+..+.+|...|.+++|+|+++++++++. |+.|++||+++++.+..+..|..++.+++|+|++++|++++.||.|++
T Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 175 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 175 (312)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 99999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeec-------ceeEEe-cCCceeeee
Q psy519 205 HELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGVY-------PRCAAQ-PVGFEAATL 276 (351)
Q Consensus 205 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-------~~~~~s-~~~~~~~~~ 276 (351)
||+++++.+..+...+...+..++|+|++++|++++.||.|++||+.+++.+..... ....++ +++..++++
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 255 (312)
T 4ery_A 176 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 255 (312)
T ss_dssp EETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEEC
T ss_pred EECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEE
Confidence 999999988877655667899999999999999999999999999999887765221 123344 567778888
Q ss_pred eccceeeEEEeeeceeCceEEEee------EEEEecCCceeeccEEE-ecCCccccce
Q psy519 277 AANSRVRTLREMHEIVGPVVVVES------FIVEIRPDKWYEANLIV-LDDDLKECNL 327 (351)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 327 (351)
+.++ .+++|+..+++...... ..+.++|++.+....-. .+..++.|+.
T Consensus 256 ~~dg---~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 256 SEDN---LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp CTTS---CEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred CCCC---EEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 7776 45667665554332211 12688999887654421 3677888864
No 37
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-41 Score=288.74 Aligned_cols=285 Identities=20% Similarity=0.261 Sum_probs=227.3
Q ss_pred cCCCcc-ceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeE---EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy519 46 TSGHDM-TVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLR---IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSI 120 (351)
Q Consensus 46 ~~~~~~-~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~---~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~ 120 (351)
+.+|.. .|++++|+|+|.+ ++|+.|++|++||+++++... ...+|...|.+++|+|++++|++++.|+.+++||+
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~ 90 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKK 90 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEc
Confidence 457877 9999999999987 999999999999998876432 23689999999999999999999999999999998
Q ss_pred CCCc--eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc---eeEEeccCCCCEEEEEECCCCcEEEE
Q psy519 121 TDGA--SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA---SVRVFSDHVSPVLSIAFSPCGKYLAS 195 (351)
Q Consensus 121 ~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~ 195 (351)
..+. .+..+.+|...|.+++|+|++++|++++. |+.|++||++++. .+..+..|...|.+++|+|++++|++
T Consensus 91 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 91 NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR---DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEE
T ss_pred cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC---CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEE
Confidence 8764 56788899999999999999999999999 9999999998764 45667789999999999999999999
Q ss_pred EcCCCeEEEEEcCCCcEE--EEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---------------ee--
Q psy519 196 GGEDGLVLTHELTTGRVI--SRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSAS---------------KI-- 256 (351)
Q Consensus 196 ~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~---------------~~-- 256 (351)
++.|+.|++||.++++.. ..+. .|...|.+++|+|++++|++++.|+.|++|+..... .+
T Consensus 168 ~s~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T 3fm0_A 168 ASYDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICT 246 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEE
T ss_pred EeCCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEE
Confidence 999999999999887643 3343 566899999999999999999999999999963221 11
Q ss_pred ----eeeecceeEEecCCceeeeeeccceeeEEEeeec--------------eeCceEEEeeEEEEecCCce-eeccEEE
Q psy519 257 ----GIGVYPRCAAQPVGFEAATLAANSRVRTLREMHE--------------IVGPVVVVESFIVEIRPDKW-YEANLIV 317 (351)
Q Consensus 257 ----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~~~~~~~~~~~~~~~~~-~~~~~~~ 317 (351)
+...+..++|+|++..+++++.++.++.+..-.. ..+|...+.+ +.|+|++. ++... .
T Consensus 247 ~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~--v~~~p~~~~~laS~-s 323 (345)
T 3fm0_A 247 LSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNC--VAWNPKEPGLLASC-S 323 (345)
T ss_dssp ECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEE--EEECSSSTTEEEEE-E
T ss_pred ecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeE--eEEeCCCceEEEEc-C
Confidence 2235678999999999999999886555443111 1244445555 78999875 44333 6
Q ss_pred ecCCccccceeeeeeeeecC
Q psy519 318 LDDDLKECNLETYSQMIPVP 337 (351)
Q Consensus 318 ~~~~i~~~~~~~~~~~~~~~ 337 (351)
.|..++.|++.......+.|
T Consensus 324 ~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 324 DDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp TTSCEEEEEECC--------
T ss_pred CCCcEEEEEecCCCCccccc
Confidence 78899999998766554443
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.5e-41 Score=294.54 Aligned_cols=278 Identities=14% Similarity=0.157 Sum_probs=241.7
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----------cCCCccceEEEEECCC----C---cE-E
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----------TSGHDMTVWSVEACSK----G---LA-L 65 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----------~~~~~~~i~~~~~~~~----~---~~-~ 65 (351)
....+|...|.+++|+| ++|++++.||.|++|++... +.+|...|.+++|+|+ + .+ +
T Consensus 10 ~~~~~h~~~i~~~~~~~----~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EESSCSSSCEEEEEECS----SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC----CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 45678999999999987 58999999999999999864 5678999999999999 8 66 9
Q ss_pred EEeCCCcEEEEeCCCCee-----eEEeeCC-----CCCeEEEEEe----CCCCE-EEEEeCCCcEEEEeCCC------Cc
Q psy519 66 TGSRDTTARLWSLEQMYP-----LRIFVGH-----KQDVTCARFH----PKITY-IGTGSYDKAVRLWSITD------GA 124 (351)
Q Consensus 66 ~~~~d~~i~vw~~~~~~~-----~~~~~~~-----~~~i~~i~~~----~~~~~-l~~~~~dg~i~i~d~~~------~~ 124 (351)
+++.|+.|++|++.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+++ ++
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999998876 7888888 5899999999 99999 99999999999999998 66
Q ss_pred eeE-----Ee-------ccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEecc---C---CCCEEEEEE
Q psy519 125 SVR-----VF-------SDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSD---H---VSPVLSIAF 186 (351)
Q Consensus 125 ~~~-----~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~---~---~~~i~~~~~ 186 (351)
.+. .+ ..|...+.+++|+|++ ++++++. |+.|++||+++++.+..+.. | ..++.+++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN---NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT---TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC---CCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 665 66 4478899999999999 9999998 99999999999999999988 8 999999999
Q ss_pred CCCCcEEEEEcCC---CeEEEEEcCCCcEEEEeecc------------CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy519 187 SPCGKYLASGGED---GLVLTHELTTGRVISRFHLQ------------EHEPVTSLVWSVTGETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 187 ~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~ 251 (351)
+|++++|++++.| |.|++||+++++.+..+... +...|.+++|+|++++|++++.||.|++||+.
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999 99999999999988887631 67899999999999999999999999999999
Q ss_pred CCceeeeee--------------------------cceeEEecCC----------ceeeeeeccceeeEEEeeeceeC
Q psy519 252 SASKIGIGV--------------------------YPRCAAQPVG----------FEAATLAANSRVRTLREMHEIVG 293 (351)
Q Consensus 252 ~~~~~~~~~--------------------------~~~~~~s~~~----------~~~~~~~~~~~~~~~~~~~~~~g 293 (351)
+++.+.... +..++|+|++ ..+++++.++ .+++|+..+|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg---~i~iw~~~~g 396 (397)
T 1sq9_A 322 TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR---SIRWFREAGG 396 (397)
T ss_dssp TTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT---EEEEEEEEC-
T ss_pred CCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC---cEEEEEcCCC
Confidence 987765443 4578999998 6788888777 5667766554
No 39
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.6e-41 Score=293.88 Aligned_cols=277 Identities=15% Similarity=0.212 Sum_probs=236.3
Q ss_pred CcCCCCccceEEeeecCC--ccccEEEEecCCCceEEEecCCc----------cCCCccceEEEEECCC----CcE-EEE
Q psy519 5 HLNHGDHKHFIQNSFKPE--TVEDVLANLESQKNLQSRYLPYY----------TSGHDMTVWSVEACSK----GLA-LTG 67 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~--~~~~~l~~~~~~~~i~i~~~~~~----------~~~~~~~i~~~~~~~~----~~~-~~~ 67 (351)
.+..+|..+|.+++|+|+ +....+++++.++.|++|++... ...|...|.+++|+|+ +.+ +++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 456789999999999982 11456666677779999999865 2236688999999999 555 999
Q ss_pred eCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCceeEEe---ccCCCCeEEEEEcc
Q psy519 68 SRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSITDGASVRVF---SDHVSPVLSIAFSP 143 (351)
Q Consensus 68 ~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~ 143 (351)
+.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++.+..+ ..|...|.+++|+|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9999999999999999999999999999999999 8999999999999999999999988888 67999999999999
Q ss_pred CCCEEEEEecCCCCCeEEEEEccCCceeEEec----------------------------cCCCCEEEEEECCCCcEEEE
Q psy519 144 CGKYLASGGTGSYDKAVRLWSITDGASVRVFS----------------------------DHVSPVLSIAFSPCGKYLAS 195 (351)
Q Consensus 144 ~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~----------------------------~~~~~i~~~~~~~~~~~l~~ 195 (351)
++++|++++. |+.|++||+++++....+. .|...|.+++|+ ++++++
T Consensus 172 ~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 246 (366)
T 3k26_A 172 LGEKIMSCGM---DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS 246 (366)
T ss_dssp TSSEEEEEET---TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred CCCEEEEecC---CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence 9999999999 9999999998765443332 388999999998 779999
Q ss_pred EcCCCeEEEEEcCCCcE--------------EEEeeccCCCCEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceee--
Q psy519 196 GGEDGLVLTHELTTGRV--------------ISRFHLQEHEPVTSLVWSVT--GETLVTGSLTGTVQFYGWPSASKIG-- 257 (351)
Q Consensus 196 ~~~dg~i~i~d~~~~~~--------------~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~~~~~~~~~~-- 257 (351)
++.|+.|++||+++++. +..+. .+...|.+++|+|+ +++|++++.||.|++||+.+++...
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheecccc-ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc
Confidence 99999999999987643 44443 45678999999999 9999999999999999999875321
Q ss_pred ---------eeecceeEEecCCceeeeeeccceeeEEEeeec
Q psy519 258 ---------IGVYPRCAAQPVGFEAATLAANSRVRTLREMHE 290 (351)
Q Consensus 258 ---------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
...+..++|+|++..+++++.++. +++|+.
T Consensus 326 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~---i~iwd~ 364 (366)
T 3k26_A 326 CTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS---IWRWDR 364 (366)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSEEEEEETTSE---EEEEEC
T ss_pred ceEEcccccCCceEEEEeCCCCCeEEEEeCCCE---EEEEEe
Confidence 245678999999999999998885 555553
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4e-40 Score=288.76 Aligned_cols=272 Identities=12% Similarity=0.094 Sum_probs=228.4
Q ss_pred cCCCCccceEEeeecCCccc-cEEEEecCCCceEEEecCCc-------cCCCccceEEEEECC-CCcE-EEEeCCCcEEE
Q psy519 6 LNHGDHKHFIQNSFKPETVE-DVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACS-KGLA-LTGSRDTTARL 75 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~-~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~v 75 (351)
...+|...|.+++|+|+ + ++|++++.||.|++|++... ..+|...|.+++|+| ++.+ ++++.|+.|++
T Consensus 68 ~~~~h~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPT--HPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EECCCSSCEEEEEECSS--CTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred eccCCCCCEEEEEECCC--CCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 34689999999999999 8 99999999999999999876 347999999999999 5566 99999999999
Q ss_pred EeCCCCeeeEEeeCC---CCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCC-EEEEE
Q psy519 76 WSLEQMYPLRIFVGH---KQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGK-YLASG 151 (351)
Q Consensus 76 w~~~~~~~~~~~~~~---~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 151 (351)
||+++ +....+..+ ...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.+++|+|+++ +++++
T Consensus 146 wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 146 RDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp EETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEE
T ss_pred EECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEE
Confidence 99996 445555443 478999999999999999999999999999 5778888889999999999999999 89999
Q ss_pred ecCCCCCeEEEEEccC----CceeEEeccCCCCEEEEEECC-CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC------
Q psy519 152 GTGSYDKAVRLWSITD----GASVRVFSDHVSPVLSIAFSP-CGKYLASGGEDGLVLTHELTTGRVISRFHLQE------ 220 (351)
Q Consensus 152 ~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------ 220 (351)
+. |+.|++||+++ +..+..+ .|...+.+++|+| ++++|++++.|+.|++||+++++....+....
T Consensus 224 ~~---d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 224 SV---DATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp ET---TSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred eC---CCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 98 99999999998 5566666 6899999999999 99999999999999999999887665554211
Q ss_pred ----------CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee-------ecceeEEecCCceeeeeeccceee
Q psy519 221 ----------HEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIG-------VYPRCAAQPVGFEAATLAANSRVR 283 (351)
Q Consensus 221 ----------~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-------~~~~~~~s~~~~~~~~~~~~~~~~ 283 (351)
...+..++|+|++++ +++.||.|++||+.+++.+... .+..++|+|++..+++++ ++
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~--- 373 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GF--- 373 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TT---
T ss_pred ccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CC---
Confidence 123445666676666 7778999999999999877653 233459999999998885 54
Q ss_pred EEEeeece
Q psy519 284 TLREMHEI 291 (351)
Q Consensus 284 ~~~~~~~~ 291 (351)
.+++|+..
T Consensus 374 ~i~iw~~~ 381 (383)
T 3ei3_B 374 NILIWNRE 381 (383)
T ss_dssp EEEEEECC
T ss_pred cEEEEecC
Confidence 57777754
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-41 Score=298.89 Aligned_cols=276 Identities=11% Similarity=0.160 Sum_probs=240.5
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCC----c-----cCCCccceEEEEECCC-CcE-EEEeCCCcEEEE
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPY----Y-----TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLW 76 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~----~-----~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw 76 (351)
..|...|.+++|+|+ +++|++++.||.|++|++.. . +.+|...|.+++|+|+ +.+ ++++.|+.|++|
T Consensus 64 ~~~~~~v~~~~~s~~--~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHN--NKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCCSSCEEEEEECSS--SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred EecCCceEEEEECCC--CCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence 458899999999999 99999999999999999987 1 6789999999999998 666 999999999999
Q ss_pred eCCCCe------eeE---EeeCCCCCeEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCceeEEeccC------CCCeEEEE
Q psy519 77 SLEQMY------PLR---IFVGHKQDVTCARFHPK-ITYIGTGSYDKAVRLWSITDGASVRVFSDH------VSPVLSIA 140 (351)
Q Consensus 77 ~~~~~~------~~~---~~~~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~~~~ 140 (351)
|+.+++ ... .+..|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+..+ ...+.+++
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 999876 332 23678899999999998 789999999999999999999988888766 78999999
Q ss_pred EccCC-CEEEEEecCCCCC---eEEEEEccCC-ceeEEec-cCCCCEEEEEECC-CCcEEEEEcCCCeEEEEEcCCCcEE
Q psy519 141 FSPCG-KYLASGGTGSYDK---AVRLWSITDG-ASVRVFS-DHVSPVLSIAFSP-CGKYLASGGEDGLVLTHELTTGRVI 213 (351)
Q Consensus 141 ~~~~~-~~l~~~~~~~~d~---~i~i~d~~~~-~~~~~~~-~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~ 213 (351)
|+|++ .++++++. |+ .|++||++++ ..+..+. .|...|.+++|+| ++++|++++.||.|++||+++++.+
T Consensus 222 ~~~~~~~~l~~~~~---d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 222 WHPKNSTRVATATG---SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp ECSSCTTEEEEEEC---CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred ECCCCCCEEEEEEC---CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 99997 68888887 87 9999999986 5667777 8999999999999 9999999999999999999999998
Q ss_pred EEeeccCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceee-----------------------------------
Q psy519 214 SRFHLQEHEPVTSLVWSVTG-ETLVTGSLTGTVQFYGWPSASKIG----------------------------------- 257 (351)
Q Consensus 214 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~----------------------------------- 257 (351)
..+. .|...|.+++|+|++ .+|++++.||.|++|++.+.+...
T Consensus 299 ~~~~-~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (416)
T 2pm9_A 299 SQFP-ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQ 377 (416)
T ss_dssp EEEE-CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCC
T ss_pred eeec-CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccccccc
Confidence 8886 567889999999998 899999999999999998765321
Q ss_pred -----eeecceeEEecCCceeeeeeccceeeEEEeeecee
Q psy519 258 -----IGVYPRCAAQPVGFEAATLAANSRVRTLREMHEIV 292 (351)
Q Consensus 258 -----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (351)
...+..++|+|+|+.++++..++ .+++|+..+
T Consensus 378 ~~~~~~~~~~~~~~s~dg~~la~~~~d~---~v~~w~~~~ 414 (416)
T 2pm9_A 378 APTWYGEPSPAAHWAFGGKLVQITPDGK---GVSITNPKI 414 (416)
T ss_dssp CCSTTCCCSCCCEEETTTEEECBCTTSS---CBCCBCCCC
T ss_pred CCccccCCccceEEeeCCeEEEEeCCCC---eEEEEEecc
Confidence 12345789999999999888776 466776544
No 42
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-40 Score=283.19 Aligned_cols=238 Identities=26% Similarity=0.403 Sum_probs=197.8
Q ss_pred CCccceEEeeecCCccccEEEEecCCCceEEEecCCc------------cCCCccceEEEEECCCCcE-EEEeCCCcEEE
Q psy519 9 GDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY------------TSGHDMTVWSVEACSKGLA-LTGSRDTTARL 75 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~------------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~v 75 (351)
+|...|.+++|+|+ +++|++++.|+.|++|++... +.+|...|.+++|+|++++ ++++.|++|++
T Consensus 56 ~h~~~v~~v~~sp~--~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPH--TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTT--SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCC--CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEE
Confidence 39999999999999 999999999999999998421 5789999999999999987 99999999999
Q ss_pred EeCCC----CeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--ceeEEeccCCCCeEEEEEccC--CCE
Q psy519 76 WSLEQ----MYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG--ASVRVFSDHVSPVLSIAFSPC--GKY 147 (351)
Q Consensus 76 w~~~~----~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~ 147 (351)
||+.. .+.+..+.+|...|.+++|+|++++|++++.|++|++||..++ +++..+.+|...|.+++|+|+ +..
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 213 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFR 213 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeE
Confidence 99943 2566778899999999999999999999999999999998776 577888999999999999998 678
Q ss_pred EEEEecCCCCCeEEEEEccCC--------ceeEEecc-CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCc--EEEEe
Q psy519 148 LASGGTGSYDKAVRLWSITDG--------ASVRVFSD-HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGR--VISRF 216 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~--------~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~ 216 (351)
|++++. |+.|++||++.+ .....+.. |...|.+++|++++ +|++++.||.|++||..+++ .....
T Consensus 214 l~s~s~---D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~ 289 (330)
T 2hes_X 214 LCSGSD---DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKR 289 (330)
T ss_dssp EEEEET---TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EEEEeC---CCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecc
Confidence 999998 999999999764 33444544 88999999999765 78999999999999998774 23333
Q ss_pred eccCCC-CEEEEEEcC--CCCEEEEEeCCCeEEEEeCCC
Q psy519 217 HLQEHE-PVTSLVWSV--TGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 217 ~~~~~~-~v~~~~~~~--~~~~l~~~~~dg~i~i~~~~~ 252 (351)
...|.. .|.+++|+| ++++|++|+.||.|++|+++.
T Consensus 290 ~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 290 ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 234544 899999999 789999999999999999875
No 43
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.1e-40 Score=315.54 Aligned_cols=279 Identities=18% Similarity=0.241 Sum_probs=248.1
Q ss_pred CCCCcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEE
Q psy519 2 DLSHLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARL 75 (351)
Q Consensus 2 ~~~~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~v 75 (351)
++.+...+|...|.+++|+|+ +++|++++.+|.|++|++.++ +.+|...|.+++|+|++.+ ++++.|+.|++
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~--~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPT--EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred ccceeeecCCCceEEEEECCC--CCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 445667889999999999999 999999999999999999876 6789999999999999987 99999999999
Q ss_pred EeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-ceeEEeccCCCCeEEEEEcc-CCCEEEEEec
Q psy519 76 WSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG-ASVRVFSDHVSPVLSIAFSP-CGKYLASGGT 153 (351)
Q Consensus 76 w~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 153 (351)
||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++ .....+.+|...|.+++|+| +++.+++++.
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999887 66778888999999999999 8899999998
Q ss_pred CCCCCeEEEEEccCCceeEEeccCC-CCEEEEEECC--CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEc
Q psy519 154 GSYDKAVRLWSITDGASVRVFSDHV-SPVLSIAFSP--CGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWS 230 (351)
Q Consensus 154 ~~~d~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 230 (351)
|+.|++||+++++....+..+. ..+..++|+| ++.++++++.||.|++||+++++.+..+. .+...|.+++|+
T Consensus 162 ---dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~ 237 (814)
T 3mkq_A 162 ---DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAVFH 237 (814)
T ss_dssp ---TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEC
T ss_pred ---CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEc
Confidence 9999999999888777776554 8899999999 99999999999999999999999888775 567889999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCcee-eeeeccceeeEEE
Q psy519 231 VTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEA-ATLAANSRVRTLR 286 (351)
Q Consensus 231 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~-~~~~~~~~~~~~~ 286 (351)
|++++|++++.||.|++||+.+++.... ..+..++|+|++..+ ++.+.++....+.
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 9999999999999999999999887765 455678999999753 4444455444443
No 44
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.8e-41 Score=290.82 Aligned_cols=280 Identities=14% Similarity=0.121 Sum_probs=230.4
Q ss_pred CcCCCCccceEEeeecCCccccE-EEEecC---CCceEEEecCCc------cCCCccceEEEEECCC---CcE-EEEeCC
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDV-LANLES---QKNLQSRYLPYY------TSGHDMTVWSVEACSK---GLA-LTGSRD 70 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~-l~~~~~---~~~i~i~~~~~~------~~~~~~~i~~~~~~~~---~~~-~~~~~d 70 (351)
++..+|...|.+++|+|+ ++. +++++. |+.|++|++... ..+|...|.+++|+|+ +.+ ++++.|
T Consensus 12 ~~~~~h~~~v~~~~~~p~--~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPC--SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEECSSCEEEEEECTT--SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhccCCCCceEEEEEcCC--CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 455679999999999999 854 556665 899999999876 3478899999999998 455 999999
Q ss_pred CcEEEEeCCCCe-eeEEeeCCCCCeEEEEE------eCCCCEEEEEeCCCcEEEEeCCCCc-eeEEeccCCC----CeEE
Q psy519 71 TTARLWSLEQMY-PLRIFVGHKQDVTCARF------HPKITYIGTGSYDKAVRLWSITDGA-SVRVFSDHVS----PVLS 138 (351)
Q Consensus 71 ~~i~vw~~~~~~-~~~~~~~~~~~i~~i~~------~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~----~i~~ 138 (351)
+.|++||+.+++ .+..+.+|...|.+++| +|++++|++++.||.|++||+++++ .+..+..+.. .+.+
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWT 169 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence 999999999888 88889999999999965 6789999999999999999999887 6777765544 8899
Q ss_pred EE----EccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECC---CCcEEEEEcCCCeEEEEEcCCCc
Q psy519 139 IA----FSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSP---CGKYLASGGEDGLVLTHELTTGR 211 (351)
Q Consensus 139 ~~----~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~ 211 (351)
++ |+|+++++++++. |+.|++||+++++.... ..|...+.+++|+| ++.++++++.||.|++||+++++
T Consensus 170 ~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYD---NGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEECCCC-CCCEEEEEET---TSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEEeccCCCCCEEEEEcc---CCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 98 7889999999998 99999999999887544 56888999999999 99999999999999999998765
Q ss_pred EEEEee----ccCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCcee-------------------e-----eeecc
Q psy519 212 VISRFH----LQEHEPVTSLVWSVTGE-TLVTGSLTGTVQFYGWPSASKI-------------------G-----IGVYP 262 (351)
Q Consensus 212 ~~~~~~----~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~-------------------~-----~~~~~ 262 (351)
....+. ..+...|.+++|+|+++ +|++++.||.|++||++.+... . ...+.
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 544332 25678999999999998 8999999999999999865322 1 14566
Q ss_pred eeEEecCCceee-eeeccceeeEEEeeeceeC
Q psy519 263 RCAAQPVGFEAA-TLAANSRVRTLREMHEIVG 293 (351)
Q Consensus 263 ~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~g 293 (351)
.++|+|++..++ +++.++ .+++|+..+.
T Consensus 326 ~~~~s~~~~~l~~s~~~d~---~i~iw~~~~~ 354 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQ---TVRVLIVTKL 354 (357)
T ss_dssp EEEECSSSTTEEEEEETTS---EEEEEEECC-
T ss_pred EEEEcCCCCeEEEEecCCC---cEEEEECCCc
Confidence 788899888887 566666 4566665443
No 45
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.9e-40 Score=287.28 Aligned_cols=240 Identities=16% Similarity=0.180 Sum_probs=215.6
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCCCcEEEEe
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWS 77 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~ 77 (351)
+...|..+|.+++|+|+ +++|++++.++.|++|++... +.+|...|.+++|+|++.+ ++++.|+.|++||
T Consensus 3 ~~~~~~~~i~~~~~s~~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKD--RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EEESCSSCCCEEEECTT--SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred eecccCCCeEEEEECCC--CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 34558899999999999 999999999999999998775 5689999999999999987 9999999999999
Q ss_pred CCCCeeeEE--eeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCce----eEEeccCCCCeEEEEEccCCCEEEEE
Q psy519 78 LEQMYPLRI--FVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGAS----VRVFSDHVSPVLSIAFSPCGKYLASG 151 (351)
Q Consensus 78 ~~~~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~ 151 (351)
+++++.... +..|...|.+++|+|++++|++++.|+.|++||++.++. ......|...|.+++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 988875443 367889999999999999999999999999999988763 23335688999999999999999999
Q ss_pred ecCCCCCeEEEEEcc------------------CCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEE
Q psy519 152 GTGSYDKAVRLWSIT------------------DGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVI 213 (351)
Q Consensus 152 ~~~~~d~~i~i~d~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 213 (351)
+. |+.|++||++ .++.+..+..|...+.+++|+|++++|++++.||.|++||+++++.+
T Consensus 161 ~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 161 SC---DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp ET---TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred cC---CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 98 9999999954 67788888899999999999999999999999999999999999998
Q ss_pred EEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy519 214 SRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 214 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~ 252 (351)
..+. .+...+.+++|+|++++|+++ .|+.|++|++.+
T Consensus 238 ~~~~-~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 238 ATLA-SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEE-CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEc-cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 8886 566789999999999988888 899999999987
No 46
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.6e-39 Score=278.48 Aligned_cols=273 Identities=22% Similarity=0.290 Sum_probs=225.2
Q ss_pred cCCCccceEEEEE-----CC-CCcE-EEEeCCCcEEEEeCCCC-------eeeEEeeCCCCCeEEEEEeCCCCEEEEEeC
Q psy519 46 TSGHDMTVWSVEA-----CS-KGLA-LTGSRDTTARLWSLEQM-------YPLRIFVGHKQDVTCARFHPKITYIGTGSY 111 (351)
Q Consensus 46 ~~~~~~~i~~~~~-----~~-~~~~-~~~~~d~~i~vw~~~~~-------~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 111 (351)
+.+|...|++++| ++ ++.+ ++|+.|++|++||+.+. .+...+.+|...|.+++|+|++.++++++.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 6789999999999 66 7777 99999999999998743 456678899999999999999999999999
Q ss_pred CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEec---cCCCCEEEEEECC
Q psy519 112 DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFS---DHVSPVLSIAFSP 188 (351)
Q Consensus 112 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~ 188 (351)
|++|++||+++++.+..+.+|...|.+++|+|++++|++++. |+.|++||+... ...... .|...+.+++|+|
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~---d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA---EREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET---TSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECC
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC---CCEEEEEeccCC-ceeeeecccCCCceeeeeeecc
Confidence 999999999999999999999999999999999999999999 999999999743 333333 6888999999999
Q ss_pred CC----------cEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceee
Q psy519 189 CG----------KYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA-SKIG 257 (351)
Q Consensus 189 ~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~-~~~~ 257 (351)
++ .+|++++.||.|++||. ..+....+. .|...|.+++|+|++++|++|+.||.|++||+... ....
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-AHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-CccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 87 78999999999999994 455555554 57789999999999999999999999999999443 2222
Q ss_pred ----eeecceeEEecCCceeeeeeccceeeEEEeeeceeCc---------------------eEEEeeEEEEecCCceee
Q psy519 258 ----IGVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGP---------------------VVVVESFIVEIRPDKWYE 312 (351)
Q Consensus 258 ----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~---------------------~~~~~~~~~~~~~~~~~~ 312 (351)
...+..++|+|++..++++ .++ .+++|+..++. ...+.+ +.|+|++.++
T Consensus 251 ~~~~~~~v~~v~~sp~~~~la~~-~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~sp~g~~l 324 (343)
T 2xzm_R 251 EFDAGSTINQIAFNPKLQWVAVG-TDQ---GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTS--LAWNALGKKL 324 (343)
T ss_dssp EEECSSCEEEEEECSSSCEEEEE-ESS---CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEE--EEECSSSCCE
T ss_pred eecCCCcEEEEEECCCCCEEEEE-CCC---CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEE--EEECCCCCeE
Confidence 2457789999999877644 444 46677654432 222333 7899999877
Q ss_pred ccEEEecCCccccceeeee
Q psy519 313 ANLIVLDDDLKECNLETYS 331 (351)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~~ 331 (351)
... ..+..++.|+++++.
T Consensus 325 ~sg-~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 325 FAG-FTDGVIRTFSFETSA 342 (343)
T ss_dssp EEE-ETTSEEEEEEEEEEE
T ss_pred EEe-cCCceEEEEEEEccC
Confidence 554 578889999987753
No 47
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-40 Score=290.76 Aligned_cols=269 Identities=14% Similarity=0.135 Sum_probs=240.7
Q ss_pred CCccceEEeeecCCccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCee
Q psy519 9 GDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYP 83 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~ 83 (351)
+|...|.+++|+|+ +++|++++.+|.|++|+.... +..|...|.+++|+|++.+ ++++.|+.|++||+.+++.
T Consensus 106 ~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 106 KTTNQVTCLAWSHD--GNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp --CBCEEEEEECTT--SSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred CCCCceEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence 36789999999999 999999999999999995544 7789999999999999987 9999999999999999999
Q ss_pred eEEeeCCCCC---------------eEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEE
Q psy519 84 LRIFVGHKQD---------------VTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYL 148 (351)
Q Consensus 84 ~~~~~~~~~~---------------i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 148 (351)
+..+..+... +.+++|+|++ .+++++.+|.|++||+++++.+..+..|...|.+++|+|++++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 9888877776 8999999975 58888999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEE
Q psy519 149 ASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLV 228 (351)
Q Consensus 149 ~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 228 (351)
++++. |+.|++||+++++.+..+..|...+.+++|+|++ ++++++.|+.|++||+++++.+..+. .+...+.+++
T Consensus 263 ~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~ 337 (425)
T 1r5m_A 263 LSASD---DGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI-VDGVPIFAGR 337 (425)
T ss_dssp EEEET---TSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE-CTTCCEEEEE
T ss_pred EEEcC---CCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc-cCCccEEEEE
Confidence 99998 9999999999999999998999999999999999 99999999999999999999888775 5668999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCc--------------------eeee-----e--ecceeEEecCCceeeeeeccce
Q psy519 229 WSVTGETLVTGSLTGTVQFYGWPSAS--------------------KIGI-----G--VYPRCAAQPVGFEAATLAANSR 281 (351)
Q Consensus 229 ~~~~~~~l~~~~~dg~i~i~~~~~~~--------------------~~~~-----~--~~~~~~~s~~~~~~~~~~~~~~ 281 (351)
|+|++++|++++.||.|++||+.+++ .+.. . .+..++|+|++..+++++.++.
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 417 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQE 417 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSC
T ss_pred EcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCce
Confidence 99999999999999999999998877 4443 2 6778999999999999988875
Q ss_pred eeEE
Q psy519 282 VRTL 285 (351)
Q Consensus 282 ~~~~ 285 (351)
++.|
T Consensus 418 i~iw 421 (425)
T 1r5m_A 418 GSVV 421 (425)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 4443
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.9e-41 Score=287.37 Aligned_cols=242 Identities=20% Similarity=0.285 Sum_probs=202.8
Q ss_pred CCcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCC--CcE-EEEeCCCcE
Q psy519 4 SHLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSK--GLA-LTGSRDTTA 73 (351)
Q Consensus 4 ~~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~--~~~-~~~~~d~~i 73 (351)
..+..+|...|.+++|+|+ |++||+++.|++|++||+... +.+|...|++++|+++ +.+ ++++.|++|
T Consensus 6 ~~~~~~H~~~V~~v~~s~~--g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYY--GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp --------CCEEEEEECGG--GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred eeecccccCeEEEeeEcCC--CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 3456789999999999999 999999999999999998754 6789999999999863 554 999999999
Q ss_pred EEEeCCCCe--eeEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCcEEEEeCCCCce---eEEeccCCCCeEEEEEccC--
Q psy519 74 RLWSLEQMY--PLRIFVGHKQDVTCARFHPK--ITYIGTGSYDKAVRLWSITDGAS---VRVFSDHVSPVLSIAFSPC-- 144 (351)
Q Consensus 74 ~vw~~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~-- 144 (351)
++||+++++ ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+.. ...+.+|...+.+++|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 999998863 56677889999999999997 78999999999999999987632 3455678899999999997
Q ss_pred ---------------CCEEEEEecCCCCCeEEEEEccCC---ceeEEeccCCCCEEEEEECCCC----cEEEEEcCCCeE
Q psy519 145 ---------------GKYLASGGTGSYDKAVRLWSITDG---ASVRVFSDHVSPVLSIAFSPCG----KYLASGGEDGLV 202 (351)
Q Consensus 145 ---------------~~~l~~~~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i 202 (351)
+++|++++. |+.|++||++.. +.+..+.+|...|.+++|+|++ ++|++++.|+.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~---D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGC---DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp C------CCSCCCCCCCBEECCBT---TSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred CccccccccccCccccceEEEecC---CCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 468999988 999999999765 3566788999999999999986 899999999999
Q ss_pred EEEEcCCCc----EEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy519 203 LTHELTTGR----VISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 203 ~i~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~ 251 (351)
++||+.+.. ....+ ..+...|.+++|+|++++|++++.|+.|++|+..
T Consensus 241 ~iw~~~~~~~~~~~~~~~-~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 241 FIWTCDDASSNTWSPKLL-HKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEECSSTTCCCCBCCEE-EECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEEccCccccchhhhhh-hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999987631 11222 2456789999999999999999999999999976
No 49
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3e-39 Score=322.59 Aligned_cols=313 Identities=18% Similarity=0.211 Sum_probs=268.5
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQ 80 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~ 80 (351)
..+|...|.+++|+|+ +++|++++.||.|++|++.+. +.+|...|.+++|+|++.+ ++++.|+.|++||+.+
T Consensus 611 ~~~h~~~v~~~~~s~~--~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQD--GQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp ECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EecccccEEEEEECCC--CCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 4589999999999999 999999999999999999887 6789999999999999988 9999999999999999
Q ss_pred CeeeEEeeCCCCCeEEEEEeC--CCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCC
Q psy519 81 MYPLRIFVGHKQDVTCARFHP--KITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDK 158 (351)
Q Consensus 81 ~~~~~~~~~~~~~i~~i~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~ 158 (351)
++.+..+.+|...|.+++|+| ++.++++++.|+.|++||+++++....+.+|...|.+++|+|+++++++++. |+
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~---dg 765 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA---DG 765 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES---SS
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC---CC
Confidence 999999999999999999999 5568999999999999999999999999999999999999999999999999 99
Q ss_pred eEEEEEccCCceeEEe-------------------------------------------------------ccCCCCEEE
Q psy519 159 AVRLWSITDGASVRVF-------------------------------------------------------SDHVSPVLS 183 (351)
Q Consensus 159 ~i~i~d~~~~~~~~~~-------------------------------------------------------~~~~~~i~~ 183 (351)
.|++||+++++....+ ..|...+.+
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~ 845 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQY 845 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCE
T ss_pred eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEE
Confidence 9999999876543322 156778899
Q ss_pred EEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--------
Q psy519 184 IAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASK-------- 255 (351)
Q Consensus 184 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~-------- 255 (351)
++|+|+++++++++.||.|++||+.++..+..+. .|...|.+++|+|++++|++++.||.|++|++.+...
T Consensus 846 ~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~ 924 (1249)
T 3sfz_A 846 CDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQ 924 (1249)
T ss_dssp EEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC-CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccc
Confidence 9999999999999999999999999998888775 6778999999999999999999999999999753210
Q ss_pred ----------------------------------eeeeecceeEEecCCceeeeeeccceeeEEEeeeceeCc-------
Q psy519 256 ----------------------------------IGIGVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGP------- 294 (351)
Q Consensus 256 ----------------------------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~------- 294 (351)
.....+..++++|++..++++..++.+ ++|+..++.
T Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i---~i~d~~~~~~~~~~~~ 1001 (1249)
T 3sfz_A 925 EIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAI---KIIELPNNRVFSSGVG 1001 (1249)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCC---EEEETTTTSCEEECCC
T ss_pred eeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCE---EEEEcCCCceeeeccc
Confidence 001345678999999999999988855 455544443
Q ss_pred -eEEEeeEEEEecCCceeeccEEEecCCccccceeeee
Q psy519 295 -VVVVESFIVEIRPDKWYEANLIVLDDDLKECNLETYS 331 (351)
Q Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 331 (351)
...+.+ +.|+|++.+.... ..+..++.|++.+..
T Consensus 1002 h~~~v~~--l~~s~dg~~l~s~-~~dg~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 1002 HKKAVRH--IQFTADGKTLISS-SEDSVIQVWNWQTGD 1036 (1249)
T ss_dssp CSSCCCC--EEECSSSSCEEEE-CSSSBEEEEETTTTE
T ss_pred CCCceEE--EEECCCCCEEEEE-cCCCEEEEEECCCCc
Confidence 333444 6899998876544 467788999887643
No 50
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.3e-40 Score=294.05 Aligned_cols=279 Identities=14% Similarity=0.129 Sum_probs=222.7
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECC-CCcE-EEEeCCCcEEEEe
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACS-KGLA-LTGSRDTTARLWS 77 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~ 77 (351)
..+|...|++++|+|.. +.+||+|+.||.|+|||+... ..+|.+.|++++|+| ++.+ ++++.|++|++||
T Consensus 115 ~~~~~~~V~~l~~~P~~-~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTH-PSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEECSSCEEEEEECSSC-TTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred CCCCCCCEEEEEEeCCC-CCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 34678899999999951 679999999999999998765 568999999999998 5655 9999999999999
Q ss_pred CCCCeeeEEeeC--CCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCC-EEEEEecC
Q psy519 78 LEQMYPLRIFVG--HKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGK-YLASGGTG 154 (351)
Q Consensus 78 ~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~ 154 (351)
++++........ +...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++|+|+++ ++++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~- 271 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASV- 271 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEET-
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecC-
Confidence 987654433332 33467889999999999999999999999986 456777888999999999999876 6778888
Q ss_pred CCCCeEEEEEccCCceeEE---eccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC-----CCEEE
Q psy519 155 SYDKAVRLWSITDGASVRV---FSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH-----EPVTS 226 (351)
Q Consensus 155 ~~d~~i~i~d~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~~v~~ 226 (351)
|+.|++||+++.+.... ...|..+|.+++|+|++++|++++.||.|++||++++.....+..... ..+..
T Consensus 272 --d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 272 --DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp --TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred --cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 99999999988754433 356889999999999999999999999999999999887766532211 12445
Q ss_pred EEEcCCCCEEEEEe------------CCCeEEEEeCCCCceeee------eeccee-EEecCCceeeeeeccceeeEEEe
Q psy519 227 LVWSVTGETLVTGS------------LTGTVQFYGWPSASKIGI------GVYPRC-AAQPVGFEAATLAANSRVRTLRE 287 (351)
Q Consensus 227 ~~~~~~~~~l~~~~------------~dg~i~i~~~~~~~~~~~------~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~ 287 (351)
..|+|++.+++++. .++.|++||..+++.+.. ..+.++ +|+|+|..++++. ++ .+++
T Consensus 350 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~---~i~i 425 (435)
T 4e54_B 350 AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GY---HILI 425 (435)
T ss_dssp CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SS---EEEE
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CC---cEEE
Confidence 67777777776654 235799999999987764 234454 6999999988754 43 5889
Q ss_pred eeceeCc
Q psy519 288 MHEIVGP 294 (351)
Q Consensus 288 ~~~~~g~ 294 (351)
|+...|+
T Consensus 426 W~~~~gk 432 (435)
T 4e54_B 426 WSQQEAR 432 (435)
T ss_dssp CCCC---
T ss_pred EECCcCe
Confidence 9988776
No 51
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.4e-39 Score=283.76 Aligned_cols=236 Identities=24% Similarity=0.395 Sum_probs=211.5
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeee
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~ 84 (351)
...|.+++|+|+ +++|++++.|+.|++||+... +.+|...|.+++|+|++.+ ++++.|++|++||+++++..
T Consensus 123 ~~~v~~v~~s~d--g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 123 DLYIRSVCFSPD--GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp CCBEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ceeEEEEEECCC--CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 345999999999 999999999999999999877 6789999999999999987 99999999999999999887
Q ss_pred EEeeCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCceeEEe-------ccCCCCeEEEEEccCCCEEEEEecCCC
Q psy519 85 RIFVGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSITDGASVRVF-------SDHVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 85 ~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
..+. +...+.+++|+| ++++|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++++|++++.
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~--- 276 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL--- 276 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET---
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC---
Confidence 7775 566799999999 8999999999999999999998877766 568899999999999999999999
Q ss_pred CCeEEEEEccCC------------ceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCE
Q psy519 157 DKAVRLWSITDG------------ASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPV 224 (351)
Q Consensus 157 d~~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 224 (351)
|+.|++||+++. .....+.+|...|.+++|+|++.+|++++.|+.|++||+++++.+..+. .|...|
T Consensus 277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~-~h~~~v 355 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ-GHRNSV 355 (393)
T ss_dssp TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCE
T ss_pred CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC-CCCCCE
Confidence 999999999763 3455677899999999999999999999999999999999999888775 577899
Q ss_pred EEEEEcC------CCCEEEEEeCCCeEEEEeCCCC
Q psy519 225 TSLVWSV------TGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 225 ~~~~~~~------~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
.+++|++ ++++|++|+.||.|++|+++..
T Consensus 356 ~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 356 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9999986 6889999999999999998643
No 52
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-40 Score=288.97 Aligned_cols=244 Identities=23% Similarity=0.369 Sum_probs=218.0
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc------------cCCCccceEEEEECCCC--cEEEEeCCCc
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY------------TSGHDMTVWSVEACSKG--LALTGSRDTT 72 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~------------~~~~~~~i~~~~~~~~~--~~~~~~~d~~ 72 (351)
..+|...|.+++|+|+ +++|++++.|+.+++|++... +.+|.+.|.++.|.|++ .+++|+.|++
T Consensus 104 ~~~h~~~v~~~~~s~~--g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~ 181 (380)
T 3iz6_a 104 IKLHCPWVMECAFAPN--GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT 181 (380)
T ss_dssp EECCCTTCCCCEECTT--SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC
T ss_pred EecCCCCEEEEEECCC--CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc
Confidence 3568889999999999 999999999999999998642 66899999999999974 4599999999
Q ss_pred EEEEeCCCCeeeEEe-----eCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeCC-CCceeEEeccCCCCeEEEEEccCC
Q psy519 73 ARLWSLEQMYPLRIF-----VGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSIT-DGASVRVFSDHVSPVLSIAFSPCG 145 (351)
Q Consensus 73 i~vw~~~~~~~~~~~-----~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~ 145 (351)
|++||+.+++.+..+ .+|...|.+++|++ ++++|++|+.|+.|++||++ .++.+..+.+|...|.+++|+|++
T Consensus 182 i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~ 261 (380)
T 3iz6_a 182 CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDG 261 (380)
T ss_dssp EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTS
T ss_pred EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCC
Confidence 999999999988776 57889999999987 88999999999999999998 457788899999999999999999
Q ss_pred CEEEEEecCCCCCeEEEEEccCCceeEEeccCC-------CCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee-
Q psy519 146 KYLASGGTGSYDKAVRLWSITDGASVRVFSDHV-------SPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH- 217 (351)
Q Consensus 146 ~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 217 (351)
++|++++. |+.|++||+++++.+..+..+. ..+.+++|+|+|++|++|+.||.|++||+..++.+..+.
T Consensus 262 ~~l~s~s~---D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 338 (380)
T 3iz6_a 262 QRFGTGSD---DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT 338 (380)
T ss_dssp SEEEEECS---SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CeEEEEcC---CCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEec
Confidence 99999999 9999999999998888775432 248899999999999999999999999999988877662
Q ss_pred --ccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy519 218 --LQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 218 --~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 255 (351)
..|...|.+++|+|+|++|++|+.||.|++|++...+.
T Consensus 339 ~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 339 LQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp SCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred ccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 34668899999999999999999999999999987643
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2e-39 Score=287.57 Aligned_cols=270 Identities=15% Similarity=0.248 Sum_probs=229.1
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeE
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLR 85 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~ 85 (351)
..+....|+|+ +++|++++.|+.|++|++... +.+|...|.+++|+|++.+ ++++.|+.|++||+.+++.+.
T Consensus 98 ~~~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 98 DYTAVDTAKLQ--MRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp CEEEEEEECSS--SCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE
T ss_pred CceEEEEEecC--CCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce
Confidence 34455688999 999999999999999999877 5789999999999999987 999999999999999999999
Q ss_pred EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEecc---CCCCeEE---------------------EEE
Q psy519 86 IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSD---HVSPVLS---------------------IAF 141 (351)
Q Consensus 86 ~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~---------------------~~~ 141 (351)
.+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. +...+.+ ++|
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 9999999999999999999999999999999999999998888764 3344444 445
Q ss_pred ccCCCEEEEEecCCCCCeEEEEEccCCceeEEec-cCCCCEEEEEECCCCc-EEEEEcCCCeEEEEEcCCCcE-EEEeec
Q psy519 142 SPCGKYLASGGTGSYDKAVRLWSITDGASVRVFS-DHVSPVLSIAFSPCGK-YLASGGEDGLVLTHELTTGRV-ISRFHL 218 (351)
Q Consensus 142 ~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~ 218 (351)
+|+++++++++. |+.|++||+++++.+..+. .|...+.+++|+|++. +|++++.||.|++||+++++. +..+..
T Consensus 256 s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 256 GTYGKYVIAGHV---SGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp SCTTEEEEEEET---TSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE
T ss_pred cCCCCEEEEEcC---CCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc
Confidence 788999999999 9999999999998777764 4788999999999998 999999999999999998754 566665
Q ss_pred cCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--------------eeeecceeEEecCCc---eeeeeeccce
Q psy519 219 QEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKI--------------GIGVYPRCAAQPVGF---EAATLAANSR 281 (351)
Q Consensus 219 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~--------------~~~~~~~~~~s~~~~---~~~~~~~~~~ 281 (351)
.+...+..+.+ +++++|++++.||.|++|++...... ....+..++|+|++. .+++.+.++.
T Consensus 333 ~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~ 411 (420)
T 3vl1_A 333 NEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNF 411 (420)
T ss_dssp STTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTE
T ss_pred cCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCce
Confidence 56678888865 57889999999999999998763221 124667899999999 6777777664
Q ss_pred eeEEEeeec
Q psy519 282 VRTLREMHE 290 (351)
Q Consensus 282 ~~~~~~~~~ 290 (351)
+.+|+.
T Consensus 412 ---~~~~~~ 417 (420)
T 3vl1_A 412 ---CALYNL 417 (420)
T ss_dssp ---EEEEES
T ss_pred ---EEEEec
Confidence 455543
No 54
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-39 Score=273.42 Aligned_cols=271 Identities=18% Similarity=0.230 Sum_probs=237.6
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeC
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSL 78 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~ 78 (351)
+...+|...|.+++| |+ +++|++++.||.|++|++... ...|...|.+++|+|++.+ ++++.|+.+++|++
T Consensus 12 ~~l~~h~~~v~~~~~-~~--~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VD--DSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp EEECCCSSCEEEEEE-EE--TTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred HHhhCCCCCcEEEEe-cC--CCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence 456789999999999 99 999999999999999999876 6678999999999999988 99999999999998
Q ss_pred CCC---eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEcc-CCCEEEEEecC
Q psy519 79 EQM---YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSP-CGKYLASGGTG 154 (351)
Q Consensus 79 ~~~---~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~ 154 (351)
... +....+.+|...|.+++| +++++++++.|+.|++|| .++....+..|...+.+++|+| +++++++++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~- 163 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA- 163 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET-
T ss_pred eecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC-
Confidence 754 567778899999999999 467999999999999999 6778888888999999999998 9999999998
Q ss_pred CCCCeEEEEEccCCceeEEecc-CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCC
Q psy519 155 SYDKAVRLWSITDGASVRVFSD-HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTG 233 (351)
Q Consensus 155 ~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 233 (351)
|+.|++|| ..+....+.. |...+.+++|+|++. +++++.||.|++||+++++.+..+. .+...+.+++|+|++
T Consensus 164 --d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 164 --DKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNG 237 (313)
T ss_dssp --TSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTS
T ss_pred --CCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh-cCCceEEEEEEecCC
Confidence 99999999 4556666766 889999999999998 8999999999999999999988886 577899999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeeeceeCc
Q psy519 234 ETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGP 294 (351)
Q Consensus 234 ~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~ 294 (351)
.|++++.||.|++||+.+++.... ..+..++|+|++. +++++.++ .+++|+...++
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg---~i~iw~~~~~~ 298 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDN---LVRIFSQEKSR 298 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTS---CEEEEESCGGG
T ss_pred -CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCC---cEEEEeCCCCc
Confidence 588999999999999999987765 3566799999998 45566665 67777777665
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.9e-41 Score=293.81 Aligned_cols=239 Identities=18% Similarity=0.205 Sum_probs=201.3
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCCCcEEEE
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLW 76 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw 76 (351)
.+.+.+..+|.+++|+|+ +++|++++.|+.|++|++... +.+|...|.+++|+|++.+ ++++.|+.|++|
T Consensus 5 ~~~~~~~~~v~~~~~s~~--g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQ--RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEEECSSCCSCCEECSS--SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred eeEecCCCcEEEEEECCC--CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 344556789999999999 999999999999999999864 6789999999999999976 999999999999
Q ss_pred eCCCCe---eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc---eeEEecc-CCCCeEEEEEccCCCEEE
Q psy519 77 SLEQMY---PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA---SVRVFSD-HVSPVLSIAFSPCGKYLA 149 (351)
Q Consensus 77 ~~~~~~---~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~ 149 (351)
|+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|++++|+
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 999877 667778899999999999999999999999999999999887 3677777 999999999999999999
Q ss_pred EEecCCCCCeEEEEEccC------------------CceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCc
Q psy519 150 SGGTGSYDKAVRLWSITD------------------GASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGR 211 (351)
Q Consensus 150 ~~~~~~~d~~i~i~d~~~------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 211 (351)
+++. |+.|++||++. ++.+..+ .|...|.+++|+|++++|++++.||.|++||+++++
T Consensus 163 ~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 163 AGCA---DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp EEES---SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred EEeC---CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 9999 99999999852 4455556 899999999999999999999999999999999887
Q ss_pred E----EEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy519 212 V----ISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 212 ~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~ 251 (351)
. +..+. .+...|.+++|+|++++|++++.++.+ +|+..
T Consensus 239 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 239 QPPRALITVK-LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 6 55554 566789999999999999999876666 66655
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.7e-38 Score=283.17 Aligned_cols=274 Identities=21% Similarity=0.326 Sum_probs=240.9
Q ss_pred CCCCccce-EEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCC
Q psy519 7 NHGDHKHF-IQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQ 80 (351)
Q Consensus 7 ~~~~~~~v-~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~ 80 (351)
..+|...+ .++.+ + +++|++|+.||.|++||+.+. +.+|.+.|++++|++++.+++++.|++|++||+++
T Consensus 117 l~~h~~~v~~~~~~--~--~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 117 LRGHMTSVITCLQF--E--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EECCSSSCEEEEEE--E--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTT
T ss_pred EcCCCCCcEEEEEE--C--CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCC
Confidence 45777775 55555 5 789999999999999999887 67899999999999999779999999999999999
Q ss_pred CeeeEEeeCCCCCeEEEEEe--CCCCEEEEEeCCCcEEEEeCCCCce-----------------------eEEeccCCCC
Q psy519 81 MYPLRIFVGHKQDVTCARFH--PKITYIGTGSYDKAVRLWSITDGAS-----------------------VRVFSDHVSP 135 (351)
Q Consensus 81 ~~~~~~~~~~~~~i~~i~~~--~~~~~l~~~~~dg~i~i~d~~~~~~-----------------------~~~~~~~~~~ 135 (351)
++.+..+.+|...|.+++|+ ++++++++++.|+.|++||++++.. ...+.+|...
T Consensus 193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 99999999999999999998 5788999999999999999987653 4456678888
Q ss_pred eEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEE
Q psy519 136 VLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISR 215 (351)
Q Consensus 136 i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 215 (351)
+.++ +++++++++++. |+.|++||+++++.+..+..|...|.+++|+|+++++++++.||.|++||+++++.+..
T Consensus 273 v~~~--~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 273 VRTV--SGHGNIVVSGSY---DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp EEEE--EEETTEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEE--cCCCCEEEEEeC---CCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 8876 568999999999 99999999999999999999999999999999999999999999999999999999888
Q ss_pred eeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eecceeEEecCCceeeeeeccceeeEEEeeece
Q psy519 216 FHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPVGFEAATLAANSRVRTLREMHEI 291 (351)
Q Consensus 216 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
+. .|...|.+++|+ +++|++++.||.|++||+.+++.... .....++++|++..+++++ ++ .+++|+..
T Consensus 348 ~~-~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg---~i~iwd~~ 420 (464)
T 3v7d_B 348 LQ-GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-EN---QFNIYNLR 420 (464)
T ss_dssp EC-CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TT---EEEEEETT
T ss_pred Ee-CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CC---eEEEEECC
Confidence 86 577899999997 58999999999999999998876644 3445679999999888876 44 68888888
Q ss_pred eCceE
Q psy519 292 VGPVV 296 (351)
Q Consensus 292 ~g~~~ 296 (351)
+|+..
T Consensus 421 ~g~~~ 425 (464)
T 3v7d_B 421 SGKLV 425 (464)
T ss_dssp TCCEE
T ss_pred CCcEE
Confidence 87754
No 57
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-40 Score=294.42 Aligned_cols=248 Identities=14% Similarity=0.162 Sum_probs=213.3
Q ss_pred CcCCCCccceEEeeecC-CccccEEEEecCCCceEEEecCC---c-------cCCCccceEEEEECCCCcE-EEEeCCCc
Q psy519 5 HLNHGDHKHFIQNSFKP-ETVEDVLANLESQKNLQSRYLPY---Y-------TSGHDMTVWSVEACSKGLA-LTGSRDTT 72 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp-~~~~~~l~~~~~~~~i~i~~~~~---~-------~~~~~~~i~~~~~~~~~~~-~~~~~d~~ 72 (351)
.+..+|...|.+++|+| + +++|++|+.||.|++|++.. . ...|...|.+++|+|++.+ ++++.|+.
T Consensus 57 ~~~~~h~~~V~~~~~s~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGE--TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EECTTTTSCEEEEEEECSS--SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeccCCCCceEEEEECCCC--CCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 34478999999999999 9 99999999999999999876 2 2268999999999999987 99999999
Q ss_pred EEEEeCC---CCeeeEEee----------C--CCCCeEEEE--EeCCCCEEEEEeCCCcEEEEeCCCCceeEEecc--CC
Q psy519 73 ARLWSLE---QMYPLRIFV----------G--HKQDVTCAR--FHPKITYIGTGSYDKAVRLWSITDGASVRVFSD--HV 133 (351)
Q Consensus 73 i~vw~~~---~~~~~~~~~----------~--~~~~i~~i~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~ 133 (351)
|++||++ +++....+. . +...+.++. +++++.+|++++.|+.|++||+++++.+..+.. |.
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~ 214 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRH 214 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGG
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCC
Confidence 9999995 444433322 1 455677777 567899999999999999999999999999987 88
Q ss_pred CCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEec-cCCCCEEEEEECC----CCcEEEEEcCCCeEEEEEcC
Q psy519 134 SPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFS-DHVSPVLSIAFSP----CGKYLASGGEDGLVLTHELT 208 (351)
Q Consensus 134 ~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~----~~~~l~~~~~dg~i~i~d~~ 208 (351)
..|.+++|+|++++|++++. |+.|++||+++++.+..+. .|..+|.+++|+| ++.+|++++.||.|++||++
T Consensus 215 ~~v~~~~~s~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 215 GAVSSICIDEECCVLILGTT---RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp CCEEEEEECTTSCEEEEEET---TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred CceEEEEECCCCCEEEEEcC---CCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 99999999999999999999 9999999999999888876 7778999996664 67899999999999999999
Q ss_pred CCcEEEEeecc-------------------------CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q psy519 209 TGRVISRFHLQ-------------------------EHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 209 ~~~~~~~~~~~-------------------------~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 258 (351)
+++.+..+... +...|.+++|+ ++++|++|+.||.|++||+.+++....
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceE
Confidence 99888777522 33568899999 779999999999999999999876654
No 58
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-39 Score=310.17 Aligned_cols=201 Identities=13% Similarity=0.133 Sum_probs=179.2
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCc-EEEEeCCCcEEEEeCCCC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGL-ALTGSRDTTARLWSLEQM 81 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~-~~~~~~d~~i~vw~~~~~ 81 (351)
..+|...|.+++|+|+ +++||+|+.||.|++|+.... ...|...|.+++|+| ++ +++++.|++|++||++++
T Consensus 13 ~~gh~~~V~~lafspd--g~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFT--QNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEECSSCEEEEEEETT--TTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred ccCCCCCcEEEEECCC--CCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 3578999999999999 999999999999999998776 345788999999999 77 499999999999999999
Q ss_pred eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCcee-----------EEeccCCCCeEEEEEccC-CCEEE
Q psy519 82 YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASV-----------RVFSDHVSPVLSIAFSPC-GKYLA 149 (351)
Q Consensus 82 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~~i~~~~~~~~-~~~l~ 149 (351)
+.+..+. |...|++++|+|+++++++|+.||.|++||+++++.. ..+.+|..+|.+++|+|+ +..++
T Consensus 90 ~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~ 168 (902)
T 2oaj_A 90 KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL 168 (902)
T ss_dssp SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence 9888886 6688999999999999999999999999999987753 234568899999999996 47888
Q ss_pred EEecCCCCCeEEEEEccCCceeEEeccC------------------CCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCc
Q psy519 150 SGGTGSYDKAVRLWSITDGASVRVFSDH------------------VSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGR 211 (351)
Q Consensus 150 ~~~~~~~d~~i~i~d~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 211 (351)
+++. |+.| +||+++++.+..+..| ...|.+++|+|+|++|++++.||.|++||+++++
T Consensus 169 ~g~~---dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 169 ISYE---YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EECS---SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEeC---CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 8888 9999 9999999888887655 4679999999999999999999999999999988
Q ss_pred EEEE
Q psy519 212 VISR 215 (351)
Q Consensus 212 ~~~~ 215 (351)
.+..
T Consensus 245 ~~~~ 248 (902)
T 2oaj_A 245 MIMA 248 (902)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.8e-39 Score=282.66 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=231.2
Q ss_pred EEeeecCCccccEEEEecCCCceEEEecCCc------cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEe
Q psy519 15 IQNSFKPETVEDVLANLESQKNLQSRYLPYY------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIF 87 (351)
Q Consensus 15 ~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~ 87 (351)
.+++|+ +..+++++.|+.|++|++..+ ...|...|.+++|+|++.+ ++++.||.|++||+++++.+..+
T Consensus 97 ~~~~~s----~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 172 (401)
T 4aez_A 97 NLLDWS----NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM 172 (401)
T ss_dssp BCEEEC----TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEeec----CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe
Confidence 345555 445778889999999999887 3348899999999999988 99999999999999999999999
Q ss_pred eCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCC-CCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEcc
Q psy519 88 VGHKQDVTCARFHPKITYIGTGSYDKAVRLWSIT-DGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSIT 166 (351)
Q Consensus 88 ~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~ 166 (351)
.+|...|.+++|+ ++.+++++.||.|++||++ .......+.+|...|.+++|+|++++|++++. |+.|++||++
T Consensus 173 ~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~ 247 (401)
T 4aez_A 173 AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN---DNVVQIWDAR 247 (401)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEETT
T ss_pred cCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC---CCeEEEccCC
Confidence 9999999999995 5799999999999999998 46677888889999999999999999999999 9999999999
Q ss_pred CCceeEEeccCCCCEEEEEECCCC-cEEEEEc--CCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEE--EeC
Q psy519 167 DGASVRVFSDHVSPVLSIAFSPCG-KYLASGG--EDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVT--GSL 241 (351)
Q Consensus 167 ~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~ 241 (351)
+++.+..+..|...|.+++|+|++ .++++++ .|+.|++||+++++.+..+. +...+.+++|+|+++++++ |+.
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 248 SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTT
T ss_pred CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecC
Confidence 999999999999999999999976 5666654 79999999999999888774 5678999999999999999 448
Q ss_pred CCeEEEEeCCCCceeee-------eecceeEEecCCceeeeeeccceeeEEEeeeceeCc
Q psy519 242 TGTVQFYGWPSASKIGI-------GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGP 294 (351)
Q Consensus 242 dg~i~i~~~~~~~~~~~-------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~ 294 (351)
||.|++||+++++.... ..+..++|+|++..+++++.++ .+++|+...++
T Consensus 326 dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg---~i~iw~~~~~~ 382 (401)
T 4aez_A 326 DNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE---NLKFWRVYDGD 382 (401)
T ss_dssp TCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS---EEEEEECCC--
T ss_pred CCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC---cEEEEECCCCc
Confidence 99999999998755433 4677899999999999998887 56777776665
No 60
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=289.87 Aligned_cols=264 Identities=14% Similarity=0.229 Sum_probs=221.4
Q ss_pred CCccceEEeeecCCccccEEEEecCCCceEEEecCCc----------------cCCCc------------cceEEEEECC
Q psy519 9 GDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------------TSGHD------------MTVWSVEACS 60 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------------~~~~~------------~~i~~~~~~~ 60 (351)
.+...|.+++|+|+ |++||+|+.||.|++|++... +.+|. ..|.+++|+|
T Consensus 26 ~~~~~V~~v~~s~~--g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 26 AEADIISTVEFNHS--GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CGGGSEEEEEECSS--SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cccCcEEEEEECCC--CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 35789999999999 999999999999999998742 55787 8899999999
Q ss_pred CC--cE-EEEeCCCcEEEEeCCCCeee---------------------------------------EE-eeCCCCCeEEE
Q psy519 61 KG--LA-LTGSRDTTARLWSLEQMYPL---------------------------------------RI-FVGHKQDVTCA 97 (351)
Q Consensus 61 ~~--~~-~~~~~d~~i~vw~~~~~~~~---------------------------------------~~-~~~~~~~i~~i 97 (351)
++ .+ ++++.|+.|++||+.+++.. .. ..+|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 97 44 99999999999998764432 12 35799999999
Q ss_pred EEeCCCCEEEEEeCCCcEEEEeCCC-CceeE-------EeccCCCCeEEEEEccCC-CEEEEEecCCCCCeEEEEEccCC
Q psy519 98 RFHPKITYIGTGSYDKAVRLWSITD-GASVR-------VFSDHVSPVLSIAFSPCG-KYLASGGTGSYDKAVRLWSITDG 168 (351)
Q Consensus 98 ~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~d~~i~i~d~~~~ 168 (351)
+|+|++++|+++ .|+.|++||+++ ++... .+..|...|.+++|+|++ ++|++++. |+.|++||++++
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~ 259 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS---KGTIRLCDMRAS 259 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET---TSCEEEEETTTC
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC---CCeEEEEECcCC
Confidence 999999999998 799999999984 44443 256789999999999998 99999999 999999999998
Q ss_pred ce----eEEeccCCC------------CEEEEEECCCCcEEEEEcCCCeEEEEEcCC-CcEEEEeeccCCC---------
Q psy519 169 AS----VRVFSDHVS------------PVLSIAFSPCGKYLASGGEDGLVLTHELTT-GRVISRFHLQEHE--------- 222 (351)
Q Consensus 169 ~~----~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~--------- 222 (351)
+. ...+..|.. .|.+++|+|++++|++++. +.|++||+++ ++.+..+.. +..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~-~~~~~~~l~~~~ 337 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQV-HEYLRSKLCSLY 337 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEES-CGGGTTTHHHHH
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeec-cccccccccccc
Confidence 86 778887776 8999999999999999998 9999999997 777766642 221
Q ss_pred ------CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-------------------------------------e
Q psy519 223 ------PVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-------------------------------------G 259 (351)
Q Consensus 223 ------~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------------------------------------~ 259 (351)
.+..++|+|++++|++|+.||.|++||+.+++.+.. .
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNK 417 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTS
T ss_pred cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCC
Confidence 133499999999999999999999999998876541 2
Q ss_pred ecceeEEecCCceeeeeeccc
Q psy519 260 VYPRCAAQPVGFEAATLAANS 280 (351)
Q Consensus 260 ~~~~~~~s~~~~~~~~~~~~~ 280 (351)
.+..++|+|++..+++++.++
T Consensus 418 ~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 418 KILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp CCCEEEECSSSSEEEEECSSC
T ss_pred ceeEEEECCCCCEEEEEecce
Confidence 345689999999998887765
No 61
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.3e-39 Score=276.56 Aligned_cols=249 Identities=19% Similarity=0.304 Sum_probs=217.6
Q ss_pred CCCcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc---------cCCCccceEEEEECC--CCcE-EEEeCC
Q psy519 3 LSHLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---------TSGHDMTVWSVEACS--KGLA-LTGSRD 70 (351)
Q Consensus 3 ~~~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---------~~~~~~~i~~~~~~~--~~~~-~~~~~d 70 (351)
+..+..+|...|.+++|+|+ +++|++++.||.|++|++... +.+|...|.+++|+| ++.+ ++++.|
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFY--GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CCCEECCCSSCEEEEEECSS--SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccccCcccccceeEEEEcCC--CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 34667899999999999999 999999999999999999864 467999999999999 4766 999999
Q ss_pred CcEEEEeCCCC---------eeeEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCcEEEEeCCCCceeEEec---------
Q psy519 71 TTARLWSLEQM---------YPLRIFVGHKQDVTCARFHPK--ITYIGTGSYDKAVRLWSITDGASVRVFS--------- 130 (351)
Q Consensus 71 ~~i~vw~~~~~---------~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------- 130 (351)
+.|++||++++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+.
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 99999999876 557788899999999999999 9999999999999999998877544332
Q ss_pred ----cCCCCeEEEEEccC---CCEEEEEecCCCCCeEEEEEccCCce--eEEeccCCCCEEEEEECCCC----cEEEEEc
Q psy519 131 ----DHVSPVLSIAFSPC---GKYLASGGTGSYDKAVRLWSITDGAS--VRVFSDHVSPVLSIAFSPCG----KYLASGG 197 (351)
Q Consensus 131 ----~~~~~i~~~~~~~~---~~~l~~~~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~----~~l~~~~ 197 (351)
.+...+.+++|+|+ +..+++++. ++.+.+|+...++. +..+..|...|.+++|+|++ ++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSAL---EQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEET---TEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecC---CCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc
Confidence 57789999999997 899999998 99998888777764 66777899999999999998 8999999
Q ss_pred CCCeEEEEEcCCC----------------------------------------------cEEEEeeccCCCCEEEEEEcC
Q psy519 198 EDGLVLTHELTTG----------------------------------------------RVISRFHLQEHEPVTSLVWSV 231 (351)
Q Consensus 198 ~dg~i~i~d~~~~----------------------------------------------~~~~~~~~~~~~~v~~~~~~~ 231 (351)
.||.|++||++++ +.+..+. .|...|.+++|+|
T Consensus 238 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-DHNGEVWSVSWNL 316 (351)
T ss_dssp TTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEEC-TTSSCEEEEEECS
T ss_pred CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe-cccccEEEEEEcC
Confidence 9999999999864 3334343 4667899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceee
Q psy519 232 TGETLVTGSLTGTVQFYGWPSASKIG 257 (351)
Q Consensus 232 ~~~~l~~~~~dg~i~i~~~~~~~~~~ 257 (351)
++++|++++.||.|++|++.+++...
T Consensus 317 ~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 317 TGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp SSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred CCCEEEEecCCCcEEEEecCcCcchh
Confidence 99999999999999999999876554
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-38 Score=278.37 Aligned_cols=247 Identities=19% Similarity=0.270 Sum_probs=215.7
Q ss_pred CCCcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCC--CcE-EEEeCCCc
Q psy519 3 LSHLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSK--GLA-LTGSRDTT 72 (351)
Q Consensus 3 ~~~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~--~~~-~~~~~d~~ 72 (351)
+..+..+|...|.+++|+|+ +++|++++.||.|++|++... +.+|...|++++|+++ +.+ ++++.|+.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYY--GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp --CCEEECCCCEEEEEECSS--SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccEEecCCcccEEEEEEcCC--CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 34567889999999999999 999999999999999999743 6789999999999977 766 99999999
Q ss_pred EEEEeCCCCe--eeEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCcEEEEeCCCCc--eeEEeccCCCCeEEEEEcc---
Q psy519 73 ARLWSLEQMY--PLRIFVGHKQDVTCARFHPK--ITYIGTGSYDKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSP--- 143 (351)
Q Consensus 73 i~vw~~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~--- 143 (351)
|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+..|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999887 67778889999999999999 9999999999999999998874 3445677899999999999
Q ss_pred ----------CCCEEEEEecCCCCCeEEEEEccCCc----eeEEeccCCCCEEEEEECCC---CcEEEEEcCCCeEEEEE
Q psy519 144 ----------CGKYLASGGTGSYDKAVRLWSITDGA----SVRVFSDHVSPVLSIAFSPC---GKYLASGGEDGLVLTHE 206 (351)
Q Consensus 144 ----------~~~~l~~~~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d 206 (351)
++.++++++. |+.|++||++++. ....+..|..+|.+++|+|+ +++|++++.||.|++||
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ---------CTTCEEEEEET---TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccCCCCCCEEEEEeC---CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 6999999999 9999999998765 44567789999999999999 89999999999999999
Q ss_pred cCCCcE---EEEee-ccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy519 207 LTTGRV---ISRFH-LQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 207 ~~~~~~---~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 254 (351)
++++.. ..... ..+...+.+++|+|++++|++++.||.|++|++....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 988642 22221 1255789999999999999999999999999998544
No 63
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.4e-38 Score=278.30 Aligned_cols=273 Identities=17% Similarity=0.216 Sum_probs=232.7
Q ss_pred eEEeeecCCccccEEE-EecCCCceEEEecCCc---------cCCCccceEEEEECC-CCcE-EEEeCCCcEEEEeCCCC
Q psy519 14 FIQNSFKPETVEDVLA-NLESQKNLQSRYLPYY---------TSGHDMTVWSVEACS-KGLA-LTGSRDTTARLWSLEQM 81 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~-~~~~~~~i~i~~~~~~---------~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~~~~ 81 (351)
...++++|+ ...++ +++.+|.|++|++... +.+|...|++++|+| ++.+ ++++.|+.|++||+.++
T Consensus 37 ~~~~~~~~~--~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 37 SGFCAVNPK--FMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SCSEEECSS--EEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CCcEEECCC--eEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 345788888 65444 5788999999998653 568999999999999 7877 99999999999999987
Q ss_pred -------eeeEEeeCCCCCeEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCceeEEe--ccCCCCeEEEEEccCCCEEEEE
Q psy519 82 -------YPLRIFVGHKQDVTCARFHPKI-TYIGTGSYDKAVRLWSITDGASVRVF--SDHVSPVLSIAFSPCGKYLASG 151 (351)
Q Consensus 82 -------~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~ 151 (351)
+++..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 5678889999999999999998 69999999999999999999999998 7899999999999999999999
Q ss_pred ecCCCCCeEEEEEccCCceeEEe-ccCCCC-EEEEEECCCCcEEEEE---cCCCeEEEEEcCCCcE-EEEeeccCCCCEE
Q psy519 152 GTGSYDKAVRLWSITDGASVRVF-SDHVSP-VLSIAFSPCGKYLASG---GEDGLVLTHELTTGRV-ISRFHLQEHEPVT 225 (351)
Q Consensus 152 ~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~ 225 (351)
+. |+.|++||+++++.+..+ ..|... +..+.|+|++++|++| +.|+.|++||+++++. +......+...+.
T Consensus 195 ~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 195 CR---DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp ET---TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred ec---CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 99 999999999999998888 677765 8899999999999999 7899999999988664 4444445677899
Q ss_pred EEEEcCCCCEEEE-EeCCCeEEEEeCCCCce----eee----eecceeEEecCCceeeeeeccceeeEEEeeeceeCceE
Q psy519 226 SLVWSVTGETLVT-GSLTGTVQFYGWPSASK----IGI----GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 226 ~~~~~~~~~~l~~-~~~dg~i~i~~~~~~~~----~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 296 (351)
.++|+|++++|++ |+.||.|++||+.+++. +.. ..+..++|+|++..++. .++ .+++|+...+...
T Consensus 272 ~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~---~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 272 LPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCE---IARFYKLHERKCE 346 (402)
T ss_dssp EEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTE---EEEEEEEETTEEE
T ss_pred EEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cce---eEEEEEcCCCcEE
Confidence 9999999999865 55799999999998873 221 56788999999998764 232 6778887776543
No 64
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.8e-39 Score=275.95 Aligned_cols=269 Identities=11% Similarity=0.044 Sum_probs=233.3
Q ss_pred CCCCCcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc--------cCCCccceEEEEECCCCc-E-EEEeCC
Q psy519 1 MDLSHLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--------TSGHDMTVWSVEACSKGL-A-LTGSRD 70 (351)
Q Consensus 1 ~~~~~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--------~~~~~~~i~~~~~~~~~~-~-~~~~~d 70 (351)
|+...+..+|...|.+++|+|+ +++|++++.|+.|++|++... ..+|...|.+++|+|++. + ++++.|
T Consensus 1 m~~~~~~~~h~~~v~~~~~s~~--~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 78 (342)
T 1yfq_A 1 MQIVQIEQAPKDYISDIKIIPS--KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGG--GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred CcceecccCCCCcEEEEEEcCC--CCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC
Confidence 5667788899999999999999 999999999999999998765 457899999999999999 6 999999
Q ss_pred CcEEEEeC-CCCeeeEEeeC--CCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCC---------CceeEEeccCCCCeEE
Q psy519 71 TTARLWSL-EQMYPLRIFVG--HKQDVTCARFHPKITYIGTGSYDKAVRLWSITD---------GASVRVFSDHVSPVLS 138 (351)
Q Consensus 71 ~~i~vw~~-~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~i~~ 138 (351)
+.|++||+ ++++. ..+.+ |...|.+++|+| ++.+++++.|+.|++||+++ ++.+..+. +...+.+
T Consensus 79 g~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~ 155 (342)
T 1yfq_A 79 GEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFT 155 (342)
T ss_dssp SCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEE
T ss_pred CeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEE
Confidence 99999999 87754 67778 999999999999 99999999999999999987 77666666 8899999
Q ss_pred EEEccCCCEEEEEecCCCCCeEEEEEccC-Cc--eeEEeccCCCCEEEEEECC-CCcEEEEEcCCCeEEEEEcCCC----
Q psy519 139 IAFSPCGKYLASGGTGSYDKAVRLWSITD-GA--SVRVFSDHVSPVLSIAFSP-CGKYLASGGEDGLVLTHELTTG---- 210 (351)
Q Consensus 139 ~~~~~~~~~l~~~~~~~~d~~i~i~d~~~-~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~---- 210 (351)
++|+|++ +++++. |+.|++||+++ +. .......|...+.+++|+| +++++++++.||.+++|+++..
T Consensus 156 ~~~~~~~--l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~ 230 (342)
T 1yfq_A 156 MDTNSSR--LIVGMN---NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY 230 (342)
T ss_dssp EEECSSE--EEEEES---TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST
T ss_pred EEecCCc--EEEEeC---CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc
Confidence 9999887 888888 99999999998 54 3334556888999999999 9999999999999999999876
Q ss_pred --cEEEEeeccC--------CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee------cceeEEecCCceee
Q psy519 211 --RVISRFHLQE--------HEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGV------YPRCAAQPVGFEAA 274 (351)
Q Consensus 211 --~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~------~~~~~~s~~~~~~~ 274 (351)
+....+.... ...|.+++|+|++++|++++.||.|++||+.+++.+.... +..++ |++..++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~ 308 (342)
T 1yfq_A 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILC 308 (342)
T ss_dssp TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEE
T ss_pred ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEE
Confidence 6666664321 2389999999999999999999999999999998776533 33455 9999999
Q ss_pred eeeccce
Q psy519 275 TLAANSR 281 (351)
Q Consensus 275 ~~~~~~~ 281 (351)
+++.++.
T Consensus 309 s~s~Dg~ 315 (342)
T 1yfq_A 309 LATSDDT 315 (342)
T ss_dssp EEEECTH
T ss_pred EEecCCc
Confidence 9999885
No 65
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.5e-38 Score=266.12 Aligned_cols=238 Identities=20% Similarity=0.269 Sum_probs=202.7
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCC--CeeeEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCcEEEEeC
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQ--MYPLRIFVGHKQDVTCARFHPK--ITYIGTGSYDKAVRLWSI 120 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~--~~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~ 120 (351)
+.+|...|++++|+|+|++ ++|+.|++|++||+++ .+.+..+.+|..+|.+++|+|+ +++|++++.|++|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 4589999999999999988 9999999999999974 4677889999999999999863 899999999999999999
Q ss_pred CCCc--eeEEeccCCCCeEEEEEccC--CCEEEEEecCCCCCeEEEEEccCCc--eeEEeccCCCCEEEEEECCC-----
Q psy519 121 TDGA--SVRVFSDHVSPVLSIAFSPC--GKYLASGGTGSYDKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSPC----- 189 (351)
Q Consensus 121 ~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~----- 189 (351)
++++ .+..+..|...|.+++|+|+ +.+|++++. |+.|++||++++. ....+..|...+.+++|+|+
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~---d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS---DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC---CCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 8874 56677789999999999997 889999999 9999999998763 24567789999999999997
Q ss_pred --------CcEEEEEcCCCeEEEEEcCCCc----EEEEeeccCCCCEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCc
Q psy519 190 --------GKYLASGGEDGLVLTHELTTGR----VISRFHLQEHEPVTSLVWSVTG---ETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 190 --------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~i~~~~~~~ 254 (351)
+++|++|+.|+.|++||+++++ ....+. .|...|.+++|+|++ .+|++++.|+.|++||+++..
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 5799999999999999998765 344443 567899999999984 899999999999999998743
Q ss_pred ------ee----eeeecceeEEecCCceeeeeeccceeeEEEeeec
Q psy519 255 ------KI----GIGVYPRCAAQPVGFEAATLAANSRVRTLREMHE 290 (351)
Q Consensus 255 ------~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
.+ ....+..++|+|++..+++++.++. +++|+.
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~---v~lw~~ 283 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK---VTLWKE 283 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC---EEEEEE
T ss_pred CccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc---EEEEEE
Confidence 11 1234667999999999999998875 556654
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.2e-38 Score=301.61 Aligned_cols=313 Identities=17% Similarity=0.209 Sum_probs=251.5
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQ 80 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~ 80 (351)
..+|..+|.+++|+|+ +++|++++.||.|++|++.+. +.+|...|++++|+|++.+ ++++.|+.|++||+++
T Consensus 51 ~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 51 IQVTETPVRAGKFIAR--KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp EECCSSCEEEEEEEGG--GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGG
T ss_pred EecCCCcEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCC
Confidence 3468999999999999 999999999999999999877 6779999999999999987 9999999999999988
Q ss_pred C-eeeEEeeCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCceeEEeccCC-CCeEEEEEcc--CCCEEEEEecCC
Q psy519 81 M-YPLRIFVGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSITDGASVRVFSDHV-SPVLSIAFSP--CGKYLASGGTGS 155 (351)
Q Consensus 81 ~-~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~l~~~~~~~ 155 (351)
+ .....+.+|...|.+++|+| +++.+++++.||.|++||+.+++....+..+. ..+.+++|+| ++.++++++.
T Consensus 129 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-- 206 (814)
T 3mkq_A 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD-- 206 (814)
T ss_dssp TSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT--
T ss_pred CceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC--
Confidence 6 67778889999999999999 88999999999999999999888777776554 8899999999 9999999998
Q ss_pred CCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCC------------
Q psy519 156 YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEP------------ 223 (351)
Q Consensus 156 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~------------ 223 (351)
|+.|++||+++++.+..+..|...+.+++|+|+++++++++.||.|++||+.+++.+..+. .+...
T Consensus 207 -dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 207 -DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN-VGLERSWCIATHPTGRK 284 (814)
T ss_dssp -TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC-CSSSSEEEEEECTTCGG
T ss_pred -CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCcEEEEEEccCCCc
Confidence 9999999999999999999999999999999999999999999999999998766554442 11122
Q ss_pred --------------------------------------------------------------------------EEEEEE
Q psy519 224 --------------------------------------------------------------------------VTSLVW 229 (351)
Q Consensus 224 --------------------------------------------------------------------------v~~~~~ 229 (351)
+.+++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (814)
T 3mkq_A 285 NYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAH 364 (814)
T ss_dssp GEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEE
T ss_pred eEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEE
Confidence 355666
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceeeeeecceeEEecCCceeeeeeccceeeEEEeeeceeCceEEEeeEEEEecCCc
Q psy519 230 SVTGETLVTGSLTGTVQFYGWPSASKIGIGVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVVVESFIVEIRPDK 309 (351)
Q Consensus 230 ~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 309 (351)
+|+|+++++++ ++.+.+|++..........+..++|+|++..++++..++.+ ++|+...++...+.. ..|+|++
T Consensus 365 spdg~~la~~~-~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~v---~l~~~~~~~~~~v~~--~~~s~dg 438 (814)
T 3mkq_A 365 SPNGRFVTVVG-DGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQI---KYYKNFKEVTSWSVP--MHSAIDR 438 (814)
T ss_dssp CTTSSEEEEEE-TTEEEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCCE---EEEETTEECTTCCCC--CSSCCCE
T ss_pred CCCCCEEEEec-CCEEEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCcE---EEEECCCCccceEEc--CCcCccc
Confidence 67777666666 66777777666655556667777777777777777666643 444444444333333 5677887
Q ss_pred e---eeccEEEecCCccccceeeeee
Q psy519 310 W---YEANLIVLDDDLKECNLETYSQ 332 (351)
Q Consensus 310 ~---~~~~~~~~~~~i~~~~~~~~~~ 332 (351)
. ++. ....+..+..|+++++..
T Consensus 439 ~~~~~l~-~~~~d~~v~~~d~~~~~~ 463 (814)
T 3mkq_A 439 LFSGALL-GVKSDGFVYFFDWDNGTL 463 (814)
T ss_dssp EECSSSE-EEEETTEEEEECTTTCCE
T ss_pred eecceEE-EEecCCEEEEEECCcCcE
Confidence 3 222 224667788888765543
No 67
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-40 Score=296.70 Aligned_cols=310 Identities=12% Similarity=-0.005 Sum_probs=231.1
Q ss_pred ccceEEeeecCCccc---------cEEEE-------------------ecCCCceEEEecCCc---------cCCCccce
Q psy519 11 HKHFIQNSFKPETVE---------DVLAN-------------------LESQKNLQSRYLPYY---------TSGHDMTV 53 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~---------~~l~~-------------------~~~~~~i~i~~~~~~---------~~~~~~~i 53 (351)
...|.+|+|+|+ + ++||+ ++.|++|+||++... +.+|.+.|
T Consensus 133 ~~~V~sv~w~p~--~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 133 GGLVTDIAWLNI--EENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp CC--CCCSCEEE--CCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSE
T ss_pred CCceeEEEeccc--CCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcE
Confidence 467888888887 5 56666 446789999998765 23567889
Q ss_pred EEEEECCC------CcE-EEEeCCCcEEEEeCCCCee-----------eEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcE
Q psy519 54 WSVEACSK------GLA-LTGSRDTTARLWSLEQMYP-----------LRIFVGHKQDVTCARFHPKITYIGTGSYDKAV 115 (351)
Q Consensus 54 ~~~~~~~~------~~~-~~~~~d~~i~vw~~~~~~~-----------~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i 115 (351)
++++|+|+ +.+ ++++.|++|++||+.+++. ...+.+|...|++++|+++ ..|++|+.||+|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV 289 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFV 289 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEE
Confidence 99999997 345 9999999999999986532 2367789999999999986 489999999999
Q ss_pred EEEeCCCCc-eeEEeccCCCCeEEE--EEccCC-CEEEEEecCCCCCeEEEEEccCCceeEEeccCCC--CEEEEEECCC
Q psy519 116 RLWSITDGA-SVRVFSDHVSPVLSI--AFSPCG-KYLASGGTGSYDKAVRLWSITDGASVRVFSDHVS--PVLSIAFSPC 189 (351)
Q Consensus 116 ~i~d~~~~~-~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~ 189 (351)
++||+++++ +...+.+|...|.++ +|+|++ ++|++++. |+.|++||+++++.+..+.+|.. .+.+++|+|+
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~---D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV---DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET---TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc---CCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 999998764 456688899999999 578887 89999999 99999999999877666666543 4788999999
Q ss_pred CcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee---------ee
Q psy519 190 GKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI---------GV 260 (351)
Q Consensus 190 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~---------~~ 260 (351)
++.+++++.|+.|++||++++..+..+. .|...|.+++|+|++++|++|+.||+|++||+..+..... ..
T Consensus 367 ~~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~ 445 (524)
T 2j04_B 367 IYSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLR 445 (524)
T ss_dssp TTEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCE
T ss_pred cCeEEEeCCCCcEEEEECcccccceeee-cCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeE
Confidence 9999999999999999999998877765 5778999999999999999999999999999865422110 13
Q ss_pred cceeEEecCCceeeeeeccceeeEE----EeeeceeCceEEEeeEEEEecCCceee--ccEEEecCCccccceeee
Q psy519 261 YPRCAAQPVGFEAATLAANSRVRTL----REMHEIVGPVVVVESFIVEIRPDKWYE--ANLIVLDDDLKECNLETY 330 (351)
Q Consensus 261 ~~~~~~s~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~ 330 (351)
+..++|+|++..+.. ..+-.+..+ .......|+...+.+ +.|+|++..- ...-..+..+++|++...
T Consensus 446 v~~v~~sp~g~~~~~-~~~~~~~~~~~~g~~~~~l~gh~~~V~~--Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 446 LWKWDYSIKDDKYRI-DSSYEVYPLTVNDVSKAKIDAHGINITC--TKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp EEECBCCSSSCEEEE-CCCCCCCC-------------CCCSCCC--EEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEEeccCCCCCeEEc-cCCceecccccCCcceeeecCCCceEEE--EECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 457889999984422 111111000 011223455555666 7899997521 112134577999987654
No 68
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.7e-38 Score=272.50 Aligned_cols=197 Identities=13% Similarity=0.092 Sum_probs=169.4
Q ss_pred ceEEEEECCCCcE-EE--EeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEE
Q psy519 52 TVWSVEACSKGLA-LT--GSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRV 128 (351)
Q Consensus 52 ~i~~~~~~~~~~~-~~--~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 128 (351)
.+.+++|+|||++ ++ ++.|++|+|||+++++++..+. |...|.+++|+|+++++++++. +.+.+|+..+++.+..
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIAR 212 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceee
Confidence 3678999999987 44 4478999999999999988885 7778999999999999999885 5577777777765543
Q ss_pred --eccCCCCeEEEEEccCCCEEEEEecCCCCC----eEEEEEccCCce----eEEeccCCCCEEEEEECCCCcEEEEEcC
Q psy519 129 --FSDHVSPVLSIAFSPCGKYLASGGTGSYDK----AVRLWSITDGAS----VRVFSDHVSPVLSIAFSPCGKYLASGGE 198 (351)
Q Consensus 129 --~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~----~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 198 (351)
...|...+.+++|+|+++++++++. |+ .+++||+..... ...+..|..+|.+++|+|||++||+|+.
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~---d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASL---KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEE---SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEec---CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 3567889999999999999999987 65 688899877643 3456789999999999999999999999
Q ss_pred CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy519 199 DGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 199 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
|+.|+|||+++++.+..+...|...|++++|+|||++|++|+.|++|+||+++..
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999999998876568899999999999999999999999999999754
No 69
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=272.76 Aligned_cols=283 Identities=16% Similarity=0.182 Sum_probs=232.6
Q ss_pred CcCCCCccceEEeeecC-CccccEEEEecCCCceEEEecCCc-----c-------------CCCccceEEEEECC-CCcE
Q psy519 5 HLNHGDHKHFIQNSFKP-ETVEDVLANLESQKNLQSRYLPYY-----T-------------SGHDMTVWSVEACS-KGLA 64 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp-~~~~~~l~~~~~~~~i~i~~~~~~-----~-------------~~~~~~i~~~~~~~-~~~~ 64 (351)
.+..+|..+|.+++|+| + +++|++++.||.|++|++... . .+|...|.+++|+| ++.+
T Consensus 37 ~~~~~h~~~v~~~~~s~~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVE--GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp EECCCCSSCEEEEEECTTT--CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred eeeeccCCcEEEEEEecCC--CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 45678999999999999 9 999999999999999999876 1 25999999999999 5555
Q ss_pred -EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCC---CCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEE
Q psy519 65 -LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPK---ITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIA 140 (351)
Q Consensus 65 -~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 140 (351)
++++.|+.|++||+.+++....+. +...+.++.++|. +.++++++.++.|++||+++++.+..+..|...|.+++
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 999999999999999999887775 7788999999984 45999999999999999999999999999999999999
Q ss_pred EccCCC-EEEEEecCCCCCeEEEEEccCCc-eeEEe---------------ccCCCCEEEEEECCCCcEEEEEcCCCeEE
Q psy519 141 FSPCGK-YLASGGTGSYDKAVRLWSITDGA-SVRVF---------------SDHVSPVLSIAFSPCGKYLASGGEDGLVL 203 (351)
Q Consensus 141 ~~~~~~-~l~~~~~~~~d~~i~i~d~~~~~-~~~~~---------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 203 (351)
|+|+++ ++++++. |+.|++||++++. .+..+ ..|...|.+++|+|++++|++++.||.|+
T Consensus 194 ~~~~~~~ll~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 270 (408)
T 4a11_B 194 WSPRYDYILATASA---DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMR 270 (408)
T ss_dssp ECSSCTTEEEEEET---TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ECCCCCcEEEEEcC---CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEE
Confidence 999998 5888888 9999999998765 34443 46888999999999999999999999999
Q ss_pred EEEcCCCcEEEEeeccC----CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceee
Q psy519 204 THELTTGRVISRFHLQE----HEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAA 274 (351)
Q Consensus 204 i~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~ 274 (351)
+||+++++......... ...+........+..+++++.++.|++||+.+++.+.. ..+..++|+|++..++
T Consensus 271 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 350 (408)
T 4a11_B 271 LWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELY 350 (408)
T ss_dssp EEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEE
Confidence 99999887654332111 11222222233455667777899999999999988765 4567899999999999
Q ss_pred eeeccceeeEEEeeeceeCceE
Q psy519 275 TLAANSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~g~~~ 296 (351)
+++.++ .+++|+..+++..
T Consensus 351 s~~~dg---~i~iw~~~~~~~~ 369 (408)
T 4a11_B 351 SGSRDC---NILAWVPSLYEPV 369 (408)
T ss_dssp EEETTS---CEEEEEECC----
T ss_pred EECCCC---eEEEEeCCCCCcc
Confidence 998887 5667777666533
No 70
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-37 Score=293.09 Aligned_cols=275 Identities=20% Similarity=0.256 Sum_probs=232.5
Q ss_pred cCCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCCC-----eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q psy519 46 TSGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQM-----YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLW 118 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~~-----~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~ 118 (351)
+.+|.+.|++++|++++ .+ ++|+.|++|++|++.+. .....+.+|...|.+++|+|++++|++++.||.|++|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 56899999999999875 45 99999999999999753 3456788999999999999999999999999999999
Q ss_pred eCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEe---ccCCCCEEEEEECCCC--cEE
Q psy519 119 SITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVF---SDHVSPVLSIAFSPCG--KYL 193 (351)
Q Consensus 119 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~--~~l 193 (351)
|+.+++....+.+|...|.+++|+|++++|++++. |+.|++||+......... ..|...|.+++|+|++ ..+
T Consensus 458 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR---DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred ECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC---CCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999999999999999999999999999999999 999999998655433332 3688899999999986 689
Q ss_pred EEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eecceeEEecC
Q psy519 194 ASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPV 269 (351)
Q Consensus 194 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~ 269 (351)
++++.|+.|++||+++++....+. .|...|.+++|+|++++|++|+.||.|++||+.+++.+.. ..+..++|+|+
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN 613 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSS
T ss_pred EEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCC
Confidence 999999999999999998887775 5778999999999999999999999999999999987754 45678999999
Q ss_pred CceeeeeeccceeeEEEeeeceeCceEEEe-------------------------eEEEEecCCceeeccEEEecCCccc
Q psy519 270 GFEAATLAANSRVRTLREMHEIVGPVVVVE-------------------------SFIVEIRPDKWYEANLIVLDDDLKE 324 (351)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~i~~ 324 (351)
+..++.+..+ .+++|+..++...... ...+.|+|++.++... ..|..++.
T Consensus 614 ~~~l~~~~~~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sg-s~Dg~i~i 688 (694)
T 3dm0_A 614 RYWLCAATEH----GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSG-YTDGVIRV 688 (694)
T ss_dssp SSEEEEEETT----EEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEE-ETTSEEEE
T ss_pred CcEEEEEcCC----CEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEE-cCCCeEEE
Confidence 9888766543 3788887766543211 1236799999887654 67888999
Q ss_pred cceee
Q psy519 325 CNLET 329 (351)
Q Consensus 325 ~~~~~ 329 (351)
|++..
T Consensus 689 W~i~~ 693 (694)
T 3dm0_A 689 WGIGR 693 (694)
T ss_dssp EEC--
T ss_pred EeccC
Confidence 98754
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6e-38 Score=313.22 Aligned_cols=315 Identities=20% Similarity=0.287 Sum_probs=262.2
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCC--cE-EEEeCCCcEEEEeC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKG--LA-LTGSRDTTARLWSL 78 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~--~~-~~~~~d~~i~vw~~ 78 (351)
..+|...|.+++|+|+ +++|++++.|+.|++||+.+. +.+|...|.+++|+|++ .+ ++++.|+.|++||+
T Consensus 653 ~~~h~~~v~~~~~s~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~ 730 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSD--DSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDL 730 (1249)
T ss_dssp ECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEET
T ss_pred eccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEEC
Confidence 3579999999999999 999999999999999999887 67899999999999954 45 89999999999999
Q ss_pred CCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe-----------------------------
Q psy519 79 EQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF----------------------------- 129 (351)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----------------------------- 129 (351)
.+++.+..+.+|...|.+++|+|+++++++++.||.|++||+.+++....+
T Consensus 731 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg 810 (1249)
T 3sfz_A 731 NQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADG 810 (1249)
T ss_dssp TSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTS
T ss_pred CCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCC
Confidence 999999999999999999999999999999999999999998766543322
Q ss_pred --------------------------ccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEE
Q psy519 130 --------------------------SDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLS 183 (351)
Q Consensus 130 --------------------------~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 183 (351)
.+|...+.+++|+|+++++++++. |+.|++||+.++..+..+.+|...|.+
T Consensus 811 ~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---dg~v~vwd~~~~~~~~~~~~h~~~v~~ 887 (1249)
T 3sfz_A 811 DKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS---QYCVELWNIDSRLKVADCRGHLSWVHG 887 (1249)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS---SSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCceeeecCCCccceEE
Confidence 156788999999999999999998 999999999999999999999999999
Q ss_pred EEECCCCcEEEEEcCCCeEEEEEcCC------------------------------------------------------
Q psy519 184 IAFSPCGKYLASGGEDGLVLTHELTT------------------------------------------------------ 209 (351)
Q Consensus 184 ~~~~~~~~~l~~~~~dg~i~i~d~~~------------------------------------------------------ 209 (351)
++|+|+++++++++.||.+++||+.+
T Consensus 888 v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 967 (1249)
T 3sfz_A 888 VMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCC 967 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEE
Confidence 99999999999999999999998542
Q ss_pred -------------------------CcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee-------
Q psy519 210 -------------------------GRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIG------- 257 (351)
Q Consensus 210 -------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~------- 257 (351)
++....+ ..|...|.+++|+|++++|++++.||.|++||+.+++...
T Consensus 968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~-~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 1046 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSG-VGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQET 1046 (1249)
T ss_dssp EECTTSSEEEEEETTSCCEEEETTTTSCEEEC-CCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSC
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcCCCceeeec-ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCc
Confidence 1111111 1345678999999999999999999999999987754321
Q ss_pred --------------------------------------eeecceeEEecCCceeeeeeccceeeEEEeeecee-------
Q psy519 258 --------------------------------------IGVYPRCAAQPVGFEAATLAANSRVRTLREMHEIV------- 292 (351)
Q Consensus 258 --------------------------------------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~------- 292 (351)
...+..++|+|++..+++++.++. +++|+..+
T Consensus 1047 v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~---v~iwd~~~~~~~~~l 1123 (1249)
T 3sfz_A 1047 VKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKT---AKIWSFDLLSPLHEL 1123 (1249)
T ss_dssp EEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSC---CCEECSSSSSCSBCC
T ss_pred EEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCc---EEEEECCCcceeeee
Confidence 124567899999999999888875 45555433
Q ss_pred -CceEEEeeEEEEecCCceeeccEEEecCCccccceeeeeee
Q psy519 293 -GPVVVVESFIVEIRPDKWYEANLIVLDDDLKECNLETYSQM 333 (351)
Q Consensus 293 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 333 (351)
++...+.+ +.|+|++.+.... ..+..++.|++.++...
T Consensus 1124 ~~h~~~v~~--~~~s~dg~~lat~-~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1124 KGHNGCVRC--SAFSLDGILLATG-DDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp CCCSSCEEE--EEECSSSSEEEEE-ETTSCCCEEESSSSCCC
T ss_pred ccCCCcEEE--EEECCCCCEEEEE-eCCCEEEEEECCCCceE
Confidence 33344445 7899999877654 56788999999876543
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.5e-37 Score=286.04 Aligned_cols=270 Identities=13% Similarity=0.121 Sum_probs=238.7
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc---------cCCCccc-eEEEEECC--CCcE-EEEeCCCc
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---------TSGHDMT-VWSVEACS--KGLA-LTGSRDTT 72 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---------~~~~~~~-i~~~~~~~--~~~~-~~~~~d~~ 72 (351)
....|...|.+++|+|+ +++|++++ ++.|++|++.+. +.+|... |.+++|+| ++++ ++++.|+.
T Consensus 13 ~~~~~~~~v~~~~~spd--g~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~ 89 (615)
T 1pgu_A 13 QPSTQRNFTTHLSYDPT--TNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK 89 (615)
T ss_dssp CCCCCTTCCCCCEEETT--TTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSE
T ss_pred CCCCccCceeEEEECCC--CCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCE
Confidence 45678899999999999 99999987 789999999743 6689999 99999999 9988 99999999
Q ss_pred EEEEeCCCC--------eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC----CcEEEEeCCCCceeEEeccCCCCeEEEE
Q psy519 73 ARLWSLEQM--------YPLRIFVGHKQDVTCARFHPKITYIGTGSYD----KAVRLWSITDGASVRVFSDHVSPVLSIA 140 (351)
Q Consensus 73 i~vw~~~~~--------~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~~~ 140 (351)
|++||+.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++.+..+.+|...|.+++
T Consensus 90 v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 90 VIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACH 167 (615)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEE
T ss_pred EEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEE
Confidence 999999754 6677888899999999999999999999987 6888888 6678888999999999999
Q ss_pred EccCCC-EEEEEecCCCCCeEEEEEccCCceeEEeccCCC---CEEEEEECCC-CcEEEEEcCCCeEEEEEcCCCcEEEE
Q psy519 141 FSPCGK-YLASGGTGSYDKAVRLWSITDGASVRVFSDHVS---PVLSIAFSPC-GKYLASGGEDGLVLTHELTTGRVISR 215 (351)
Q Consensus 141 ~~~~~~-~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~ 215 (351)
|+|+++ .+++++. |+.|++||+++++.+..+..|.. .|.+++|+|+ +++|++++.||.|++||+++++.+..
T Consensus 168 ~~~~~~~~l~~~~~---d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 168 LKQSRPMRSMTVGD---DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp ECSSSSCEEEEEET---TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred ECCCCCcEEEEEeC---CCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 999998 7999988 99999999999999999999998 9999999999 99999999999999999999998888
Q ss_pred eec---cCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeec---------ceeEEecCCceeeeeeccceee
Q psy519 216 FHL---QEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGVY---------PRCAAQPVGFEAATLAANSRVR 283 (351)
Q Consensus 216 ~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~---------~~~~~s~~~~~~~~~~~~~~~~ 283 (351)
+.. .+...|.+++|+ ++++|++++.||.|++||+++++.+..... ..+.+ |++..+++++.++.+.
T Consensus 245 ~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~i~ 322 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLN 322 (615)
T ss_dssp CCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEE-EETTEEEEEETTSCEE
T ss_pred ecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEe-CCCCeEEEEECCCCEE
Confidence 744 677899999999 999999999999999999999887765332 24555 4888888888887544
Q ss_pred EE
Q psy519 284 TL 285 (351)
Q Consensus 284 ~~ 285 (351)
.+
T Consensus 323 ~~ 324 (615)
T 1pgu_A 323 FY 324 (615)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.5e-36 Score=271.36 Aligned_cols=303 Identities=19% Similarity=0.300 Sum_probs=251.1
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCC
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLE 79 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~ 79 (351)
....+|...+.. +++++ +++|++|+.||.|++|++.+. +.+|...|++++|+ +..+++++.|+.|++||++
T Consensus 112 ~~l~~h~~~v~~-~~~~~--g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 112 KVLKGHDDHVIT-CLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEEECSTTSCEE-EEEEE--TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE-TTEEEEEETTSCEEEEETT
T ss_pred EEecccCCCcEE-EEEEc--CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec-CCEEEEEeCCCeEEEEECC
Confidence 345678877644 35566 899999999999999999877 77899999999997 3355999999999999999
Q ss_pred CCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 80 QMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 80 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
+++.+..+.+|...|.+++|+ ++.+++++.||.|++||+++++.+..+.+|...+.+++| +++++++++. |+.
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~ 260 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY---DFM 260 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET---TSC
T ss_pred cCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC---CCE
Confidence 999999999999999999996 568999999999999999999999999999999999999 7889999998 999
Q ss_pred EEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEE
Q psy519 160 VRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTG 239 (351)
Q Consensus 160 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 239 (351)
|++||+++++.+..+..|...+.++.| ++.++++++.||.|++||+++++.+..+. .+...+.++.+ +++++++|
T Consensus 261 i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~ 335 (445)
T 2ovr_B 261 VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLTSGMEL--KDNILVSG 335 (445)
T ss_dssp EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC-CCCSCEEEEEE--ETTEEEEE
T ss_pred EEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc-CCcccEEEEEE--eCCEEEEE
Confidence 999999999999999999999999999 78999999999999999999999988875 56677888877 46799999
Q ss_pred eCCCeEEEEeCCCCceeeeee--------cceeEEecCCceeeeeeccceeeEEEeeeceeCceEEEe-----------e
Q psy519 240 SLTGTVQFYGWPSASKIGIGV--------YPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVVVE-----------S 300 (351)
Q Consensus 240 ~~dg~i~i~~~~~~~~~~~~~--------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------~ 300 (351)
+.||.|++||+++++.+.... +..+++ ++..+++++.++ .+++|+..+++..... .
T Consensus 336 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~v 410 (445)
T 2ovr_B 336 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDG---TVKLWDLKTGEFIRNLVTLESGGSGGVV 410 (445)
T ss_dssp ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTS---EEEEEETTTCCEEEEEEECTTGGGTCEE
T ss_pred eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEEEEeCCC---eEEEEECCCCceeeeeeccccCCCCceE
Confidence 999999999999988776532 334555 567888888877 5667776666544322 1
Q ss_pred EEEEecCCceeeccEEEecCC----ccccceee
Q psy519 301 FIVEIRPDKWYEANLIVLDDD----LKECNLET 329 (351)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~ 329 (351)
..+.|+|++.+.... ..+.. +..|++..
T Consensus 411 ~~~~~s~~~~~la~~-~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 411 WRIRASNTKLVCAVG-SRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEECSSEEEEEEE-CSSSSSCCEEEEEECCC
T ss_pred EEEEecCCEEEEEEc-ccCCCCccEEEEEECCC
Confidence 126788988765533 23333 55665543
No 74
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-36 Score=261.93 Aligned_cols=276 Identities=21% Similarity=0.273 Sum_probs=230.9
Q ss_pred cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCe-----eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q psy519 46 TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQMY-----PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLW 118 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~-----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~ 118 (351)
+.+|.+.|++++|+|+ +++ ++|+.|++|+|||+.+.+ +...+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 6799999999999997 566 899999999999987643 566788999999999999999999999999999999
Q ss_pred eCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCcee-EEeccCCCCEEEEEECCCC--cEEEE
Q psy519 119 SITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASV-RVFSDHVSPVLSIAFSPCG--KYLAS 195 (351)
Q Consensus 119 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~--~~l~~ 195 (351)
+............+...+..+.++++++++++++. |+.+++||+...... .....|...+..++|++++ .++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~---d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR---DKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecC---CCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 99999888888888899999999999999999999 999999998766443 3356788999999999865 57889
Q ss_pred EcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eecceeEEecCCc
Q psy519 196 GGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPVGF 271 (351)
Q Consensus 196 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~ 271 (351)
++.|+.|++||+++++.+..+. .|...|.+++|+|++++|++|+.||.|++||+++.+.+.. ..+..+.++|++.
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 269 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY 269 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSS
T ss_pred EcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCc
Confidence 9999999999999999888775 5778999999999999999999999999999999887765 4556788999876
Q ss_pred eeeeeeccceeeEEEeeeceeCc-----------------eEEEeeEEEEecCCceeeccEEEecCCccccceeeeee
Q psy519 272 EAATLAANSRVRTLREMHEIVGP-----------------VVVVESFIVEIRPDKWYEANLIVLDDDLKECNLETYSQ 332 (351)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 332 (351)
.++ ++.++ .+++|+...+. ...+.+ +.|+|++.++... ..|..|++|+++++++
T Consensus 270 ~~~-~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~--l~~s~dg~~l~sg-s~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 270 WLC-AATGP---SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS--LAWSADGQTLFAG-YTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EEE-EEETT---EEEEEETTTTEEEEEECCC-------CCCCCEEE--EEECTTSSEEEEE-ETTSCEEEEEEEC---
T ss_pred eee-ccCCC---EEEEEECCCCeEEEeccccceeeeccCCCCCEEE--EEECCCCCEEEEE-eCCCEEEEEeCCCcCC
Confidence 554 44555 46667654432 223334 6899999887654 6788999999998753
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=271.41 Aligned_cols=285 Identities=15% Similarity=0.176 Sum_probs=236.1
Q ss_pred CCcCCCCccceEEeeecCCccc---cEEEEecCCCceEEEecCC-c------cCCCccceEEEEECCCCcE-EEEeCCCc
Q psy519 4 SHLNHGDHKHFIQNSFKPETVE---DVLANLESQKNLQSRYLPY-Y------TSGHDMTVWSVEACSKGLA-LTGSRDTT 72 (351)
Q Consensus 4 ~~~~~~~~~~v~~~~~sp~~~~---~~l~~~~~~~~i~i~~~~~-~------~~~~~~~i~~~~~~~~~~~-~~~~~d~~ 72 (351)
..+..+|...|.+++|+|+ + ++|++++.||.|++|++.. . ..+|...|.+++|+|++.+ ++++.|+.
T Consensus 32 ~~~~~~h~~~v~~~~~~~~--~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPP--TLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp EECSSCCSSCEEEEEECCT--TSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eEeccCCCCceEEEEEcCC--CCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 3567889999999999999 6 8999999999999999986 2 6679999999999999987 99999999
Q ss_pred EEEEeCCCCeeeEEeeCCCCCeEEEEE--eCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEE
Q psy519 73 ARLWSLEQMYPLRIFVGHKQDVTCARF--HPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLAS 150 (351)
Q Consensus 73 i~vw~~~~~~~~~~~~~~~~~i~~i~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 150 (351)
|++||+++++.+. +..|...|.+++| +|++++|++++.||.|++||+++++.+..+..+ ..+.++.+. ...+++
T Consensus 110 v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~ 185 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADVI--YPMAVV 185 (368)
T ss_dssp EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEEE--TTEEEE
T ss_pred EEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEec--CCeeEE
Confidence 9999999988766 5579999999999 889999999999999999999999988888755 466667665 457777
Q ss_pred EecCCCCCeEEEEEccCCceeEEe--ccCCCCEEEEEECCCCcE----EEEEcCCCeEEEEEcCCC---cEEEEeeccCC
Q psy519 151 GGTGSYDKAVRLWSITDGASVRVF--SDHVSPVLSIAFSPCGKY----LASGGEDGLVLTHELTTG---RVISRFHLQEH 221 (351)
Q Consensus 151 ~~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~----l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~ 221 (351)
++. ++.+.+||++........ ..+......+.+.++... +++++.||.|++||++.. .....+. .+.
T Consensus 186 ~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~ 261 (368)
T 3mmy_A 186 ATA---ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK-CHR 261 (368)
T ss_dssp EEG---GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE-CSE
T ss_pred EeC---CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee-eee
Confidence 777 999999999876543332 223445666666655443 999999999999999887 3444443 222
Q ss_pred C------------CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeE
Q psy519 222 E------------PVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRT 284 (351)
Q Consensus 222 ~------------~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~ 284 (351)
. .|.+++|+|++++|++++.||.|++||+.+++.+.. ..+..++|+|++..+++++.++..+.
T Consensus 262 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 262 SNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp EC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred cccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 2 699999999999999999999999999999987765 45678999999999999999998888
Q ss_pred EEeeeceeCceEEE
Q psy519 285 LREMHEIVGPVVVV 298 (351)
Q Consensus 285 ~~~~~~~~g~~~~~ 298 (351)
+++|+........+
T Consensus 342 ~~~~~~~~~~~i~~ 355 (368)
T 3mmy_A 342 HEFYNPQKKNYIFL 355 (368)
T ss_dssp GGGCCTTSCCEEEE
T ss_pred ccccCCCccceeee
Confidence 88887666554433
No 76
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=264.34 Aligned_cols=278 Identities=18% Similarity=0.268 Sum_probs=238.5
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA 124 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~ 124 (351)
+.+|...|++++|+|++.+ ++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 107 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ 107 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 5689999999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeccCCCCeEEEEEccCCCEEEEEecCCCC-----CeEEEEEccCCc-----------eeEEeccCCC--CEEEEEE
Q psy519 125 SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD-----KAVRLWSITDGA-----------SVRVFSDHVS--PVLSIAF 186 (351)
Q Consensus 125 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d-----~~i~i~d~~~~~-----------~~~~~~~~~~--~i~~~~~ 186 (351)
.+..+. +...+.+++|+|+++++++++. + +.|++||++.+. ....+..|.. .+.+++|
T Consensus 108 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 108 CVATWK-SPVPVKRVEFSPCGNYFLAILD---NVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp EEEEEE-CSSCEEEEEECTTSSEEEEEEC---CBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred EEEEee-cCCCeEEEEEccCCCEEEEecC---CccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 988887 8899999999999999999987 7 999999998653 3344445555 8999999
Q ss_pred CCCCcEEEEEcCCCeEEEEEcCC-CcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eec
Q psy519 187 SPCGKYLASGGEDGLVLTHELTT-GRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----GVY 261 (351)
Q Consensus 187 ~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----~~~ 261 (351)
+|++++|++++.||.|++||+++ .+.+..+. .+...|.+++|+|++++|++++.||.|++||+.+++.+.. ..+
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 262 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSID-LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL 262 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCc
Confidence 99999999999999999999998 56666664 5678999999999999999999999999999999887765 456
Q ss_pred ceeEEecCCceeeeeeccceee-----------EEEeeeceeCceE--------EEeeEEEEecCCceeeccEEEecCCc
Q psy519 262 PRCAAQPVGFEAATLAANSRVR-----------TLREMHEIVGPVV--------VVESFIVEIRPDKWYEANLIVLDDDL 322 (351)
Q Consensus 262 ~~~~~s~~~~~~~~~~~~~~~~-----------~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i 322 (351)
..+.|+|++..++++..++... .+++|+..++... .+.+ +.|+|++.++... ..+..+
T Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~--~~~s~~~~~l~s~-~~dg~v 339 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNT--VAISPQGTSYASG-GEDGFI 339 (369)
T ss_dssp EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEE--EEECTTSSEEEEE-ETTSEE
T ss_pred eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEE--EEECCCCCEEEEE-cCCCeE
Confidence 6799999999999988776322 5777877655433 2333 6899999877654 578889
Q ss_pred cccceeeee
Q psy519 323 KECNLETYS 331 (351)
Q Consensus 323 ~~~~~~~~~ 331 (351)
+.|+++...
T Consensus 340 ~iw~~~~~~ 348 (369)
T 3zwl_B 340 RLHHFEKSY 348 (369)
T ss_dssp EEEEECHHH
T ss_pred EEEECcccc
Confidence 999997654
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1e-36 Score=282.93 Aligned_cols=308 Identities=12% Similarity=0.069 Sum_probs=247.5
Q ss_pred CCCCccceEEeeecCCcccc-EEEEecCCCceEEEecCCc-----cCCCcc---ceEEEEECCC-CcE-EEEeCCCcEEE
Q psy519 7 NHGDHKHFIQNSFKPETVED-VLANLESQKNLQSRYLPYY-----TSGHDM---TVWSVEACSK-GLA-LTGSRDTTARL 75 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~~~~-----~~~~~~---~i~~~~~~~~-~~~-~~~~~d~~i~v 75 (351)
..+|...|.+++|+|+ ++ +|++++.|+.|++|++... +.+|.. .|.+++|+|+ +.+ ++++.|+.|++
T Consensus 156 ~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 156 VSGHSQRINACHLKQS--RPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp CCSCSSCEEEEEECSS--SSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred eecCCccEEEEEECCC--CCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 4578999999999999 87 8999999999999999876 667888 9999999999 887 89999999999
Q ss_pred EeCCCCeeeEEe-e---CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccC----CCCeEEEEEccCCCE
Q psy519 76 WSLEQMYPLRIF-V---GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDH----VSPVLSIAFSPCGKY 147 (351)
Q Consensus 76 w~~~~~~~~~~~-~---~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~ 147 (351)
||+.+++.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++.+..+..+ ...+.++.|+ ++++
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 311 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGR 311 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTE
T ss_pred EECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCe
Confidence 999999999888 6 899999999999 9999999999999999999999988888765 3678888886 8899
Q ss_pred EEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCC---------------------------------CcEEE
Q psy519 148 LASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC---------------------------------GKYLA 194 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---------------------------------~~~l~ 194 (351)
+++++. |+.|++||+++++.+..+..|..+|.+++| |+ +..++
T Consensus 312 l~~~~~---~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~ 387 (615)
T 1pgu_A 312 IISLSL---DGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYS 387 (615)
T ss_dssp EEEEET---TSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCE
T ss_pred EEEEEC---CCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEE
Confidence 999998 999999999888777777666665555555 33 33444
Q ss_pred EE-------------------------------------------------------------------------cC-CC
Q psy519 195 SG-------------------------------------------------------------------------GE-DG 200 (351)
Q Consensus 195 ~~-------------------------------------------------------------------------~~-dg 200 (351)
++ +. |+
T Consensus 388 ~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~ 467 (615)
T 1pgu_A 388 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGN 467 (615)
T ss_dssp EEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTS
T ss_pred EEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCC
Confidence 44 44 45
Q ss_pred eEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee------eecceeEEec------
Q psy519 201 LVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI------GVYPRCAAQP------ 268 (351)
Q Consensus 201 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~------~~~~~~~~s~------ 268 (351)
.|++||+.+++........+...|.+++|+|++++|++++.||.|++||+.+++.+.. ..+..++|+|
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~ 547 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGAN 547 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC----
T ss_pred eEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccc
Confidence 5555555443332111224557899999999999999999999999999999887754 4567899999
Q ss_pred ----CCceeeeeeccceeeEEEeeeceeC---------ceEEEeeEEEEecCCceeeccEEEecCCccccceee
Q psy519 269 ----VGFEAATLAANSRVRTLREMHEIVG---------PVVVVESFIVEIRPDKWYEANLIVLDDDLKECNLET 329 (351)
Q Consensus 269 ----~~~~~~~~~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 329 (351)
++..+++++.++. +++|+...+ |...+.+ +.|+|++. +. ....+..++.|++++
T Consensus 548 ~~~~~~~~l~~~~~dg~---i~iw~~~~~~~~~~~~~~h~~~v~~--l~~s~~~~-l~-s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 548 EEEIEEDLVATGSLDTN---IFIYSVKRPMKIIKALNAHKDGVNN--LLWETPST-LV-SSGADACIKRWNVVL 614 (615)
T ss_dssp --CCSCCEEEEEETTSC---EEEEESSCTTCCEEETTSSTTCEEE--EEEEETTE-EE-EEETTSCEEEEEEC-
T ss_pred ccccCCCEEEEEcCCCc---EEEEECCCCceechhhhcCccceEE--EEEcCCCC-eE-EecCCceEEEEeeec
Confidence 9999999998884 555555544 3333444 78999998 43 335788899999865
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.5e-36 Score=271.33 Aligned_cols=268 Identities=18% Similarity=0.281 Sum_probs=233.7
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEEC--CCCcE-EEEeCCCcEEEEeC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEAC--SKGLA-LTGSRDTTARLWSL 78 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~--~~~~~-~~~~~d~~i~vw~~ 78 (351)
..+|...|.+++|+|+ + +|++++.||.|++||+.+. +.+|...|.+++|+ +++.+ ++++.|+.|++||+
T Consensus 158 ~~~h~~~V~~l~~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~ 234 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHG--G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 234 (464)
T ss_dssp ECCCSSCEEEEEECST--T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEEC
T ss_pred EeCCCcCEEEEEEcCC--C-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeC
Confidence 4589999999999999 7 8999999999999999887 67899999999998 56666 99999999999999
Q ss_pred CCCee-----------------------eEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCC
Q psy519 79 EQMYP-----------------------LRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSP 135 (351)
Q Consensus 79 ~~~~~-----------------------~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 135 (351)
.+++. ...+.+|...+.++ +++++++++++.||.|++||+++++.+..+.+|...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 312 (464)
T 3v7d_B 235 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR 312 (464)
T ss_dssp CCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC
Confidence 87652 44667888888877 567889999999999999999999999999999999
Q ss_pred eEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEE
Q psy519 136 VLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISR 215 (351)
Q Consensus 136 i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 215 (351)
|.+++|+|+++++++++. |+.|++||+++++.+..+..|...|.+++|+ ++++++++.||.|++||++++.....
T Consensus 313 v~~~~~~~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 313 IYSTIYDHERKRCISASM---DTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp EEEEEEETTTTEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEEeC---CCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee
Confidence 999999999999999999 9999999999999999999999999999997 58999999999999999998876665
Q ss_pred eeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee------eecceeEEecCCceeeeeeccceeeEEEeee
Q psy519 216 FHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI------GVYPRCAAQPVGFEAATLAANSRVRTLREMH 289 (351)
Q Consensus 216 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
. .+...+..++|+++++++++++ ||.|++||+++++.+.. ..+..++|+ +..+++++.++....+.+++
T Consensus 388 ~--~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 388 Y--HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp E--ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEEEETTEEEEEEEE
T ss_pred e--cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEEEeCCeEEEEEee
Confidence 5 4556788899999999999998 89999999999988864 455667775 66666666666566666655
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.2e-37 Score=269.70 Aligned_cols=246 Identities=18% Similarity=0.264 Sum_probs=212.3
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCC-CC
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLE-QM 81 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~-~~ 81 (351)
..|...|.+++|+|+ +++|++++.||.|++|++... +.+|...|.+++|++ ..+++++.|+.|++||+. ..
T Consensus 131 ~~~~~~v~~v~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~ 207 (401)
T 4aez_A 131 TDESTYVASVKWSHD--GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR-HVLSSGSRSGAIHHHDVRIAN 207 (401)
T ss_dssp CCTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSS
T ss_pred cCCCCCEEEEEECCC--CCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC-CEEEEEcCCCCEEEEecccCc
Confidence 347899999999999 999999999999999999876 678999999999943 244999999999999998 56
Q ss_pred eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCE-EEEEecCCCCCeE
Q psy519 82 YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKY-LASGGTGSYDKAV 160 (351)
Q Consensus 82 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~~~~d~~i 160 (351)
..+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..|...|.+++|+|++.. +++++ ++.|+.|
T Consensus 208 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~-gs~d~~i 286 (401)
T 4aez_A 208 HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGG-GTMDKQI 286 (401)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEEC-CTTTCEE
T ss_pred ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEec-CCCCCEE
Confidence 677888899999999999999999999999999999999999999999899999999999997755 45543 2239999
Q ss_pred EEEEccCCceeEEeccCCCCEEEEEECCCCcEEEE--EcCCCeEEEEEcCCCcEEEEeec-cCCCCEEEEEEcCCCCEEE
Q psy519 161 RLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLAS--GGEDGLVLTHELTTGRVISRFHL-QEHEPVTSLVWSVTGETLV 237 (351)
Q Consensus 161 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~ 237 (351)
++||+++++.+..+. +...+.+++|+|+++++++ |+.||.|++||+.+++....... .|...|.+++|+|++++|+
T Consensus 287 ~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 287 HFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILS 365 (401)
T ss_dssp EEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEE
T ss_pred EEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEE
Confidence 999999999888885 5678999999999999998 44899999999998766655432 4568899999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeee
Q psy519 238 TGSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 238 ~~~~dg~i~i~~~~~~~~~~~ 258 (351)
+++.||.|++|++.+++.+..
T Consensus 366 s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 366 TAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp EECTTSEEEEEECCC------
T ss_pred EEeCCCcEEEEECCCCccccc
Confidence 999999999999998876643
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.5e-36 Score=267.88 Aligned_cols=265 Identities=22% Similarity=0.356 Sum_probs=227.9
Q ss_pred eEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeE
Q psy519 14 FIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLR 85 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~ 85 (351)
...|+||++ ++||+| .|++|+|||..++ ..+|...|++++|+|+|.+ ++|+.|+.|++||+++++.+.
T Consensus 108 ~~~l~wS~~---n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 108 LNLVDWSSG---NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp CBCEEECTT---SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ceeEEECCC---CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 456899976 477776 4899999999887 4578889999999999988 999999999999999999999
Q ss_pred EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-ceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEE
Q psy519 86 IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG-ASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWS 164 (351)
Q Consensus 86 ~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d 164 (351)
.+.+|...+.++.++ +..+++++.|+.+++||.... ..+..+.+|...+..+.++|+++++++++. |+.+++||
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~---D~~v~i~~ 258 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN---DNLVNVWP 258 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeec---cccceEEe
Confidence 999999999998886 579999999999999998864 456778889999999999999999999999 99999999
Q ss_pred ccCCc----eeEEeccCCCCEEEEEECCCC-cEEEE--EcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEE
Q psy519 165 ITDGA----SVRVFSDHVSPVLSIAFSPCG-KYLAS--GGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLV 237 (351)
Q Consensus 165 ~~~~~----~~~~~~~~~~~i~~~~~~~~~-~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 237 (351)
..+++ .+.....|...|.+++|+|++ .++++ |+.|+.|++||+.+++....+. .+..+.++.|+|+++.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v~~~~~~~~~~~lv 336 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELI 336 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCEEEEEEETTTTEEE
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--cccceeeeeecCCCCeEE
Confidence 98764 356677899999999999965 45554 4579999999999999888774 456899999999999888
Q ss_pred EEe--CCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeee
Q psy519 238 TGS--LTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMH 289 (351)
Q Consensus 238 ~~~--~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
+++ .|+.|++||+++++.+.. ..+..++|+|+|..+++++.|+.++.|++++
T Consensus 337 ~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 337 SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 765 689999999999988865 4677899999999999999988655544443
No 81
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-37 Score=296.89 Aligned_cols=308 Identities=12% Similarity=0.071 Sum_probs=231.2
Q ss_pred CccceEEeeecCCccccEEEEecCCCceEEEecCCc----------------cCCCccceEEEEECCCC--cEEEEeCCC
Q psy519 10 DHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------------TSGHDMTVWSVEACSKG--LALTGSRDT 71 (351)
Q Consensus 10 ~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------------~~~~~~~i~~~~~~~~~--~~~~~~~d~ 71 (351)
|...|.+++|+|+ +++|++|+.||.|++||+... ..+|.+.|++++|+|++ .+++++.|+
T Consensus 97 ~~~~V~~v~~sp~--g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg 174 (902)
T 2oaj_A 97 VPGKITSIDTDAS--LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV 174 (902)
T ss_dssp CSSCEEEEECCTT--CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC
T ss_pred CCCCEEEEEECCC--CCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC
Confidence 5678999999999 999999999999999999765 24688999999999974 449999999
Q ss_pred cEEEEeCCCCeeeEEeeCC------------------CCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEE--ec-
Q psy519 72 TARLWSLEQMYPLRIFVGH------------------KQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRV--FS- 130 (351)
Q Consensus 72 ~i~vw~~~~~~~~~~~~~~------------------~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~- 130 (351)
.| +||+++++.+..+..| ...|.+++|+|++++|++++.||.|++||+++++.+.. +.
T Consensus 175 ~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~ 253 (902)
T 2oaj_A 175 TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFE 253 (902)
T ss_dssp EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSC
T ss_pred cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecc
Confidence 99 9999999988887665 46799999999999999999999999999999887653 21
Q ss_pred --c-------------CCCCeEEEEEc----cCC-CEEEEEecCC-----------------------------------
Q psy519 131 --D-------------HVSPVLSIAFS----PCG-KYLASGGTGS----------------------------------- 155 (351)
Q Consensus 131 --~-------------~~~~i~~~~~~----~~~-~~l~~~~~~~----------------------------------- 155 (351)
. +..+|.+++|+ |++ .++++++...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 333 (902)
T 2oaj_A 254 TEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQ 333 (902)
T ss_dssp SCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSE
T ss_pred cccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccc
Confidence 1 24479999995 433 3455553200
Q ss_pred --------------------------------------CCCeEEEEEccCCceeEE------------------------
Q psy519 156 --------------------------------------YDKAVRLWSITDGASVRV------------------------ 173 (351)
Q Consensus 156 --------------------------------------~d~~i~i~d~~~~~~~~~------------------------ 173 (351)
.|+.|++||+.++.....
T Consensus 334 ~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~ 413 (902)
T 2oaj_A 334 MKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVP 413 (902)
T ss_dssp EEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEE
T ss_pred eEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcC
Confidence 024455565544422111
Q ss_pred -----------------eccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEE----EEeec------cCCCCEEE
Q psy519 174 -----------------FSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVI----SRFHL------QEHEPVTS 226 (351)
Q Consensus 174 -----------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~------~~~~~v~~ 226 (351)
+.+|...+..++|+|++++|++|+.|+.|++||+.++... ..... .|...|.+
T Consensus 414 ~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~s 493 (902)
T 2oaj_A 414 NKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDK 493 (902)
T ss_dssp HHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEE
T ss_pred HHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeE
Confidence 1122223334556789999999999999999999877421 11111 45678999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCce---------------------------------------------e-----
Q psy519 227 LVWSVTGETLVTGSLTGTVQFYGWPSASK---------------------------------------------I----- 256 (351)
Q Consensus 227 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~---------------------------------------------~----- 256 (351)
++|+|++++||+|+.||+|++|++.+++. +
T Consensus 494 vafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 573 (902)
T 2oaj_A 494 ISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA 573 (902)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC
T ss_pred EEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc
Confidence 99999999999999999999999976621 2
Q ss_pred eeeecceeEEecCCceeeeeeccceeeEEEeeecee--------------CceEEEeeEEEEec-----CCc---eeecc
Q psy519 257 GIGVYPRCAAQPVGFEAATLAANSRVRTLREMHEIV--------------GPVVVVESFIVEIR-----PDK---WYEAN 314 (351)
Q Consensus 257 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~-----~~~---~~~~~ 314 (351)
+...+.+++|||+| .+|+++.++.+ ++|+... ||...+.+ +.|+ ||+ .++..
T Consensus 574 h~~~V~svafSpdG-~lAsgs~D~tv---~lwd~~~~~~~~~~~~~~~~~gh~~~V~s--v~Fs~~~~~~Dg~~~~~l~s 647 (902)
T 2oaj_A 574 NKGKTSAINNSNIG-FVGIAYAAGSL---MLIDRRGPAIIYMENIREISGAQSACVTC--IEFVIMEYGDDGYSSILMVC 647 (902)
T ss_dssp CSCSEEEEEECBTS-EEEEEETTSEE---EEEETTTTEEEEEEEGGGTCSSCCCCEEE--EEEEEEECTTSSSEEEEEEE
T ss_pred CCCcEEEEEecCCc-EEEEEeCCCcE---EEEECCCCeEEEEeehhHhccccccceEE--EEEEEEecCCCCCcceEEEE
Confidence 22566789999999 99999988755 4555433 45555666 7899 886 44433
Q ss_pred EEEecCCccccce
Q psy519 315 LIVLDDDLKECNL 327 (351)
Q Consensus 315 ~~~~~~~i~~~~~ 327 (351)
. ..+.+++.|++
T Consensus 648 g-s~D~tv~~wd~ 659 (902)
T 2oaj_A 648 G-TDMGEVITYKI 659 (902)
T ss_dssp E-ETTSEEEEEEE
T ss_pred E-ecCCcEEEEEE
Confidence 3 57889999998
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-36 Score=265.18 Aligned_cols=275 Identities=18% Similarity=0.162 Sum_probs=223.1
Q ss_pred cCCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCCCeeeEEee--CCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeC
Q psy519 46 TSGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQMYPLRIFV--GHKQDVTCARFHP-KITYIGTGSYDKAVRLWSI 120 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~~~~~~~~~--~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~ 120 (351)
+.+|...|++++|+|++ .+ ++++.|+.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEET
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEEC
Confidence 56899999999999998 66 999999999999999887776665 6999999999999 7899999999999999999
Q ss_pred CCCceeEEecc---CCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCc-EEEEE
Q psy519 121 TDGASVRVFSD---HVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGK-YLASG 196 (351)
Q Consensus 121 ~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 196 (351)
+. +.+..+.. +...|.+++|+|++++|++++. |+.|++||+ +++.+..+..|...|.+++|+|+++ +++++
T Consensus 149 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 149 SG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS---TGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp TS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEET---TSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEE
T ss_pred CC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECC---CCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEE
Confidence 85 44555543 3478999999999999999999 999999999 5778888999999999999999998 99999
Q ss_pred cCCCeEEEEEcCC----CcEEEEeeccCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeee-----------
Q psy519 197 GEDGLVLTHELTT----GRVISRFHLQEHEPVTSLVWSV-TGETLVTGSLTGTVQFYGWPSASKIGIGV----------- 260 (351)
Q Consensus 197 ~~dg~i~i~d~~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~----------- 260 (351)
+.|+.|++||+++ +..+..+ .+...|.+++|+| ++++|++++.|+.|++||+.+++......
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp ETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred eCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccccc
Confidence 9999999999987 5566655 5778999999999 99999999999999999999876543311
Q ss_pred cceeEEecCCceeeeee------ccceeeEEEeeeceeCceEEEee--------EEEEecCCceeeccEEEecCCccccc
Q psy519 261 YPRCAAQPVGFEAATLA------ANSRVRTLREMHEIVGPVVVVES--------FIVEIRPDKWYEANLIVLDDDLKECN 326 (351)
Q Consensus 261 ~~~~~~s~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~ 326 (351)
...+.|+|++..++++. +.+.++.+++|+..+++...... ..+.|+|++.++... .+..++.|+
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~--sd~~i~iw~ 379 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG--MGFNILIWN 379 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE--ETTEEEEEE
T ss_pred ceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe--cCCcEEEEe
Confidence 11234444444433322 33456678889887776543332 124899999988666 388899998
Q ss_pred eee
Q psy519 327 LET 329 (351)
Q Consensus 327 ~~~ 329 (351)
+++
T Consensus 380 ~~~ 382 (383)
T 3ei3_B 380 RED 382 (383)
T ss_dssp CC-
T ss_pred cCC
Confidence 864
No 83
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2e-36 Score=263.81 Aligned_cols=277 Identities=12% Similarity=0.038 Sum_probs=229.6
Q ss_pred CCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCe--eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc
Q psy519 48 GHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMY--PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA 124 (351)
Q Consensus 48 ~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~ 124 (351)
.|..+|++++|+|++.+ ++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 48899999999999988 888899999999999987 888899999999999999999999999999999999998887
Q ss_pred eeEE--eccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCce----eEEeccCCCCEEEEEECCCCcEEEEEcC
Q psy519 125 SVRV--FSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGAS----VRVFSDHVSPVLSIAFSPCGKYLASGGE 198 (351)
Q Consensus 125 ~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 198 (351)
.... +..|...|.+++|+|++++|++++. |+.|++||++.++. ......|...|.+++|+|++++|++++.
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSG---SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEET---TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeC---CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 5443 3668899999999999999999998 99999999998763 2333568899999999999999999999
Q ss_pred CCeEEEEEcC------------------CCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee--
Q psy519 199 DGLVLTHELT------------------TGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-- 258 (351)
Q Consensus 199 dg~i~i~d~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-- 258 (351)
||.|++||++ .++.+..+. .+...+.+++|+|++++|++++.||.|++||+++++.+..
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 9999999953 567777665 5668899999999999999999999999999998887754
Q ss_pred ---eecceeEEecCCceeeeeeccceeeEEEeee----------------------------------------------
Q psy519 259 ---GVYPRCAAQPVGFEAATLAANSRVRTLREMH---------------------------------------------- 289 (351)
Q Consensus 259 ---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 289 (351)
..+..++|+|++..++++ .++.+..|.+-.
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 320 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CC
T ss_pred cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccc
Confidence 356789999999988877 777665554433
Q ss_pred ceeCceEEEeeEEEE-ecCCc---eeeccEEEecCCccccceeeeee
Q psy519 290 EIVGPVVVVESFIVE-IRPDK---WYEANLIVLDDDLKECNLETYSQ 332 (351)
Q Consensus 290 ~~~g~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~i~~~~~~~~~~ 332 (351)
...+|...+.+ +. +++++ .+.... ..|..++.|++++..+
T Consensus 321 ~~~~h~~~v~~--~~~~~~~g~~~~~l~s~-~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 321 LDSLHKNSVSQ--ISVLSGGKAKCSQFCTT-GMDGGMSIWDVRSLES 364 (372)
T ss_dssp CSSSSSSCEEE--EEEEESTTTSCSEEEEE-ETTSEEEEEEHHHHHH
T ss_pred ccccccCCcce--eEEecCCCcceeeEEEe-cCCCceEEEEecChhH
Confidence 00244445555 44 44665 555544 5788899999877544
No 84
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.1e-37 Score=268.16 Aligned_cols=238 Identities=17% Similarity=0.229 Sum_probs=208.6
Q ss_pred CCccceEEeeecCCcc--ccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECC-CCcE-EEEeCCCcEEEEeCC
Q psy519 9 GDHKHFIQNSFKPETV--EDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACS-KGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~--~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~~ 79 (351)
.|...|.+++|+|+.. +.+|++++.||.|++|++.+. +.+|...|.+++|+| ++.+ ++++.|+.|++||++
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 3678899999999822 358999999999999999877 668999999999999 8877 999999999999999
Q ss_pred CCeeeEEe---eCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEec--------------------------
Q psy519 80 QMYPLRIF---VGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFS-------------------------- 130 (351)
Q Consensus 80 ~~~~~~~~---~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------------- 130 (351)
+++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 99988888 6899999999999999999999999999999999876554333
Q ss_pred --cCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCce--------------eEEeccCCCCEEEEEECCC--CcE
Q psy519 131 --DHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGAS--------------VRVFSDHVSPVLSIAFSPC--GKY 192 (351)
Q Consensus 131 --~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~--------------~~~~~~~~~~i~~~~~~~~--~~~ 192 (351)
.|...|.+++|+ ++++++++. |+.|++||+++++. +..+..|...|.+++|+|+ +++
T Consensus 227 ~~~~~~~v~~~~~~--~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 227 RDIHRNYVDCVRWL--GDLILSKSC---ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp CSSCSSCCCEEEEE--TTEEEEECS---SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred ccCCcceEEEEEEc--CCEEEEEec---CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 388999999998 779999998 99999999988744 7778889999999999999 999
Q ss_pred EEEEcCCCeEEEEEcCCCcE----EEEeeccC--CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy519 193 LASGGEDGLVLTHELTTGRV----ISRFHLQE--HEPVTSLVWSVTGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 193 l~~~~~dg~i~i~d~~~~~~----~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~ 252 (351)
|++++.||.|++||+.+++. ...+. .+ ...|.+++|+|++++|++++.||.|++||+.+
T Consensus 302 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 302 LALGNQVGKLYVWDLEVEDPHKAKCTTLT-HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEECTTSCEEEEECCSSSGGGCEEEEEC-CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEEecCCcEEEEECCCCCCccccceEEc-ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99999999999999998753 33443 33 58999999999999999999999999999853
No 85
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.7e-36 Score=259.48 Aligned_cols=272 Identities=10% Similarity=0.067 Sum_probs=214.8
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc---cCCCccceEEEEECCCCcE--EEEeCCCcEEEEeCCCCe
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---TSGHDMTVWSVEACSKGLA--LTGSRDTTARLWSLEQMY 82 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~~--~~~~~d~~i~vw~~~~~~ 82 (351)
.+|...|.+++|+|+ |++|++|+.++ +++|++... ...+...+..+++.+++.+ ++++.|++|++||+.+++
T Consensus 16 ~~h~~~V~~v~fs~d--g~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQD--QSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp ---CCCCCEEEECTT--SSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred ccCCCceEEEEECCC--CCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 678999999999999 99999998775 789998876 2222234777888887765 567888999999999999
Q ss_pred eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-ceeEEeccCCCCeEEEEEccCCCEEEEE--ecCCCCCe
Q psy519 83 PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG-ASVRVFSDHVSPVLSIAFSPCGKYLASG--GTGSYDKA 159 (351)
Q Consensus 83 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~~~~~d~~ 159 (351)
.+..+. +...|.+++++++. ++++ .++.|++||+.++ +.+..+.. +...+++++ .+++++ +. +|.
T Consensus 93 ~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~---~g~ 160 (355)
T 3vu4_A 93 DVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFN---LGQ 160 (355)
T ss_dssp EEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSC---TTC
T ss_pred EEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCc---CcE
Confidence 988886 66789999998764 4444 3789999999988 66666554 445567777 666664 55 999
Q ss_pred EEEEEccCCc----------------eeEEeccCCCCEEEEEECCCCcEEEEEcCCCe-EEEEEcCCCcEEEEeecc-CC
Q psy519 160 VRLWSITDGA----------------SVRVFSDHVSPVLSIAFSPCGKYLASGGEDGL-VLTHELTTGRVISRFHLQ-EH 221 (351)
Q Consensus 160 i~i~d~~~~~----------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~-~~ 221 (351)
|++||+++++ .+..+.+|..+|.+++|+|++++|++++.|+. |++||+++++.+..+... |.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 9999998765 26778899999999999999999999999998 999999999999988633 77
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----------------------------eecceeEEecCCcee
Q psy519 222 EPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----------------------------GVYPRCAAQPVGFEA 273 (351)
Q Consensus 222 ~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----------------------------~~~~~~~~s~~~~~~ 273 (351)
..|.+++|+|++++|++++.|+.|++||++.+..... .....++|+|++..+
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l 320 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV 320 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE
Confidence 8999999999999999999999999999976532111 011567899999999
Q ss_pred eeeeccceeeEEEeeeceeCc
Q psy519 274 ATLAANSRVRTLREMHEIVGP 294 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~g~ 294 (351)
++++.++....+.+.....++
T Consensus 321 ~~~~~dg~~~~~~~~~~~~~~ 341 (355)
T 3vu4_A 321 VVWPHTRMIETFKVVFDDEME 341 (355)
T ss_dssp EEETTTTEEEEEEEEEETTTT
T ss_pred EEEeCCCeEEEEEEEcCCCCc
Confidence 999988866655554444443
No 86
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-37 Score=275.11 Aligned_cols=251 Identities=9% Similarity=0.023 Sum_probs=205.9
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc--cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeE
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLR 85 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~ 85 (351)
+.-...|.+++|||| |+++|+++.|++|+ +.... ..+|...|++++|+|+| .++.+.+|+.+..+ ..
T Consensus 12 ~~~~~~v~sv~~SpD--G~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~-~~ 80 (588)
T 2j04_A 12 KEFEDWKNNLTWARD--GTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLE------FENKLDFELAQQNG-LL 80 (588)
T ss_dssp CCCSSSSCCEEECTT--SCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCC------CCCTTTTSCCCSSC-SS
T ss_pred hHhhccEEEEEECCC--CCEEEEEcCCceee--cccccceecCCCccEEEEEECCCC------CcceEEEEeCCCce-Ee
Confidence 334578899999999 99999999999999 64444 67999999999999998 45665555543222 22
Q ss_pred EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCC-----CeEEEEEccCCCEEEEEecCCCCCeE
Q psy519 86 IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVS-----PVLSIAFSPCGKYLASGGTGSYDKAV 160 (351)
Q Consensus 86 ~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~~~~d~~i 160 (351)
.+ .|...|.+++|+|+|+.|++++.||.|++||... .+..+. |.. .+.+++|||+|++|++|+. ||.|
T Consensus 81 ~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~---DGtV 153 (588)
T 2j04_A 81 NS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE---DGEL 153 (588)
T ss_dssp TT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET---TSEE
T ss_pred ec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC---CCEE
Confidence 22 4578899999999999999999999999999544 666666 655 4999999999999999999 9999
Q ss_pred EEEEccCCce-------eEEe----ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcE---EEEeeccCCCCEEE
Q psy519 161 RLWSITDGAS-------VRVF----SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRV---ISRFHLQEHEPVTS 226 (351)
Q Consensus 161 ~i~d~~~~~~-------~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~ 226 (351)
++||+.++.. +..+ .+|...|.+++|+||| +++++.|+.+++||+..+.. ...+...|...|.+
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 9999998752 5665 5677899999999999 78888899999999987773 23443345678999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEE--ecCCceeeeeeccce
Q psy519 227 LVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAA--QPVGFEAATLAANSR 281 (351)
Q Consensus 227 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~--s~~~~~~~~~~~~~~ 281 (351)
++|+ ++.||+++ ++.|++||+.+++.... ..+..+++ +|++..++++..+|.
T Consensus 232 vaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 232 LKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp EEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred EEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 9999 68999987 69999999998877332 46778999 999999998887876
No 87
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.5e-37 Score=263.85 Aligned_cols=239 Identities=19% Similarity=0.262 Sum_probs=197.3
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCe--eeEEeeCCCCCeEEEEEeC--CCCEEEEEeCCCcEEEEeC
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMY--PLRIFVGHKQDVTCARFHP--KITYIGTGSYDKAVRLWSI 120 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~i~~i~~~~--~~~~l~~~~~dg~i~i~d~ 120 (351)
+.+|.+.|++++|+|+|++ ++|+.|++|++||+.+++ .+..+.+|...|.+++|+| ++++|++++.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 5689999999999999987 999999999999998764 4677889999999999986 4889999999999999999
Q ss_pred CCCc--eeEEeccCCCCeEEEEEccC--CCEEEEEecCCCCCeEEEEEccCCce---eEEeccCCCCEEEEEECCC----
Q psy519 121 TDGA--SVRVFSDHVSPVLSIAFSPC--GKYLASGGTGSYDKAVRLWSITDGAS---VRVFSDHVSPVLSIAFSPC---- 189 (351)
Q Consensus 121 ~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~---- 189 (351)
++++ ....+.+|...|.+++|+|+ +.+|++++. |+.|++||++.+.. ...+..|...+.+++|+|+
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~---D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS---DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS---SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC---CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 8874 56677889999999999997 789999998 99999999987632 3445678889999999997
Q ss_pred -------------CcEEEEEcCCCeEEEEEcCCC---cEEEEeeccCCCCEEEEEEcCCC----CEEEEEeCCCeEEEEe
Q psy519 190 -------------GKYLASGGEDGLVLTHELTTG---RVISRFHLQEHEPVTSLVWSVTG----ETLVTGSLTGTVQFYG 249 (351)
Q Consensus 190 -------------~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~i~~ 249 (351)
+++|++++.|+.|++||++.. +.+..+. .|...|.+++|+|++ ++|++++.|++|++|+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 478999999999999999755 2344443 566889999999986 8999999999999999
Q ss_pred CCCC-------ceee--eeecceeEEecCCceeeeeeccceeeEEEeeece
Q psy519 250 WPSA-------SKIG--IGVYPRCAAQPVGFEAATLAANSRVRTLREMHEI 291 (351)
Q Consensus 250 ~~~~-------~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
+.+. +.+. ...+..++|+|++..+++++.++. +++|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~---v~lw~~~ 292 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK---VTLWKES 292 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC---EEEEEEC
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe---EEEEEEC
Confidence 8762 1222 256778999999999999988875 5566543
No 88
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.3e-37 Score=273.40 Aligned_cols=280 Identities=17% Similarity=0.145 Sum_probs=219.7
Q ss_pred cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCee--eEEeeCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeC
Q psy519 46 TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQMYP--LRIFVGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSI 120 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~ 120 (351)
..+|...|++++|+|. +.+ ++|+.||.|+|||+.+++. ...+.+|...|++++|+| ++++|++++.||+|++||+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 4467888999999995 444 9999999999999987654 344568999999999998 6889999999999999999
Q ss_pred CCCceeEEec--cCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCc-EEEEEc
Q psy519 121 TDGASVRVFS--DHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGK-YLASGG 197 (351)
Q Consensus 121 ~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~ 197 (351)
+++....... .+...+.+++|+|++++|++|+. |+.|++||++ ++.+..+..|...|.+++|+|++. ++++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN---VGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS---SSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC---CCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEec
Confidence 8765433332 23456789999999999999998 9999999986 456777889999999999999875 788999
Q ss_pred CCCeEEEEEcCCCcEEEEee--ccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee-----------eccee
Q psy519 198 EDGLVLTHELTTGRVISRFH--LQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIG-----------VYPRC 264 (351)
Q Consensus 198 ~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-----------~~~~~ 264 (351)
.|+.|++||+++.+....+. ..|...|.+++|+|+|++|++++.||.|++||+.+++..... .....
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 99999999998876543332 246678999999999999999999999999999987655431 22346
Q ss_pred EEecCCceeeeeeccc---------eeeEEEeeeceeCceEEEee--------EEEEecCCceeeccEEEecCCccccce
Q psy519 265 AAQPVGFEAATLAANS---------RVRTLREMHEIVGPVVVVES--------FIVEIRPDKWYEANLIVLDDDLKECNL 327 (351)
Q Consensus 265 ~~s~~~~~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~ 327 (351)
.|+|++..++++.... ..+.+++|+..+|+...... ....|+|++.++... .++.|++|++
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg--~d~~i~iW~~ 428 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASA--MGYHILIWSQ 428 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEE--CSSEEEECCC
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEE--cCCcEEEEEC
Confidence 7888887776654322 33578999988877554321 123699999887643 5788999999
Q ss_pred eeee
Q psy519 328 ETYS 331 (351)
Q Consensus 328 ~~~~ 331 (351)
+.+.
T Consensus 429 ~~gk 432 (435)
T 4e54_B 429 QEAR 432 (435)
T ss_dssp C---
T ss_pred CcCe
Confidence 8754
No 89
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.6e-36 Score=265.63 Aligned_cols=264 Identities=18% Similarity=0.339 Sum_probs=227.0
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM 81 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~ 81 (351)
.+|...|.+++| + +++|++|+.||.|++||+.+. +.+|...|.+++| ++.+ ++|+.||.|++||++++
T Consensus 130 ~~~~~~v~~~~~--d--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 130 SETSKGVYCLQY--D--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CSSCCCEEEEEC--C--SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred cCCCCcEEEEEE--C--CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 356678888887 6 899999999999999999876 7789999999999 5555 99999999999999999
Q ss_pred eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCcee---EEeccCCCCeEEEEEccCCCEEEEEecCCCCC
Q psy519 82 YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASV---RVFSDHVSPVLSIAFSPCGKYLASGGTGSYDK 158 (351)
Q Consensus 82 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~ 158 (351)
+.+..+.+|...|.+++|++ ..+++++.||.|++||+++++.. ..+.+|...|.+++| +++++++++. |+
T Consensus 204 ~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~---dg 276 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG---DR 276 (435)
T ss_dssp CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEET---TS
T ss_pred cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeC---CC
Confidence 99999999999999999974 59999999999999999987765 667789999999999 7889999999 99
Q ss_pred eEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEE
Q psy519 159 AVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVT 238 (351)
Q Consensus 159 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 238 (351)
.|++||+++++.+..+..|...+.++.| +++++++|+.||.|++||+++++.+..+. .|...|.+++| ++.+|++
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEC--CSSEEEE
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEe-CCcCcEEEEEe--cCCEEEE
Confidence 9999999999999999999999999999 47899999999999999999999988886 56788999998 7899999
Q ss_pred EeCCCeEEEEeCCCCc---------eeee-----eecceeEEecCCceeeeeeccceeeEEEeeeceeCc
Q psy519 239 GSLTGTVQFYGWPSAS---------KIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGP 294 (351)
Q Consensus 239 ~~~dg~i~i~~~~~~~---------~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~ 294 (351)
|+.||.|++||+.+++ .+.. ..+..++| ++..+++++.++ .+++|+...+.
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg---~i~iwd~~~~~ 416 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDD---TILIWDFLNDP 416 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSS---EEEEEC-----
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCC---EEEEEECCCCC
Confidence 9999999999987654 3332 45566777 778888887776 56677765544
No 90
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.4e-35 Score=262.52 Aligned_cols=268 Identities=22% Similarity=0.367 Sum_probs=239.2
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQM 81 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~ 81 (351)
..+|...|.+++|+ +++|++++.||.|++|++.+. +.+|...|.++.|++ ..+++++.|+.|++||+.++
T Consensus 155 ~~~h~~~v~~~~~~----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 155 LVGHTGGVWSSQMR----DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE-KRVVSGSRDATLRVWDIETG 229 (445)
T ss_dssp CCCCSSCEEEEEEE----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TEEEEEETTSEEEEEESSSC
T ss_pred EcCCCCCEEEEEec----CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC-CEEEEEeCCCEEEEEECCCC
Confidence 46899999999997 568999999999999999877 678999999999963 34599999999999999999
Q ss_pred eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEE
Q psy519 82 YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVR 161 (351)
Q Consensus 82 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~ 161 (351)
+.+..+.+|...+.+++| +++.+++++.||.|++||+++++.+..+.+|...|.+++| +++++++++. |+.|+
T Consensus 230 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~ 302 (445)
T 2ovr_B 230 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL---DTSIR 302 (445)
T ss_dssp CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEET---TSCEE
T ss_pred cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeC---CCeEE
Confidence 999999999999999999 6789999999999999999999999999999999999999 7899999999 99999
Q ss_pred EEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeec--cCCCCEEEEEEcCCCCEEEEE
Q psy519 162 LWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHL--QEHEPVTSLVWSVTGETLVTG 239 (351)
Q Consensus 162 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 239 (351)
+||+++++.+..+..|...+.++.++ ++++++++.||.|++||+++++.+..+.. .+...|.+++|+ +++|++|
T Consensus 303 i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~ 378 (445)
T 2ovr_B 303 VWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITS 378 (445)
T ss_dssp EEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEE
T ss_pred EEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEE
Confidence 99999999999999999999888874 67999999999999999999998888763 255789999995 6899999
Q ss_pred eCCCeEEEEeCCCCceeeee----------ecceeEEecCCceeeeeeccce-eeEEEeeec
Q psy519 240 SLTGTVQFYGWPSASKIGIG----------VYPRCAAQPVGFEAATLAANSR-VRTLREMHE 290 (351)
Q Consensus 240 ~~dg~i~i~~~~~~~~~~~~----------~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~ 290 (351)
+.||.|++||+.+++.+... .+..++|+|++..+++++.++. ...+.+|+.
T Consensus 379 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 379 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp ETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred eCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 99999999999999877643 4678999999999999999986 444666653
No 91
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.1e-35 Score=248.53 Aligned_cols=263 Identities=21% Similarity=0.340 Sum_probs=223.2
Q ss_pred eEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeE
Q psy519 14 FIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLR 85 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~ 85 (351)
...|+|||+ + +||+| .|++|++||+.++ ..+|...|++++|+|++++ ++|+.|++|++|++++++.+.
T Consensus 28 ~~~l~WS~~--~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSSG--N-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp CBCEEECTT--S-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred ceEEEECCC--C-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 356899988 6 67766 5899999999876 4578889999999999988 999999999999999999999
Q ss_pred EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc-eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEE
Q psy519 86 IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA-SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWS 164 (351)
Q Consensus 86 ~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d 164 (351)
.+.+|...+.++.+. +..+++++.++.+++|+..... .+..+.+|...+..+.++++++++++++. |+.|++||
T Consensus 104 ~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~i~iwd 178 (318)
T 4ggc_A 104 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN---DNLVNVWP 178 (318)
T ss_dssp EEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred EecCccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEec---CcceeEEE
Confidence 999999988876654 6799999999999999988754 55677889999999999999999999999 99999999
Q ss_pred ccCCc----eeEEeccCCCCEEEEEECCCCc-E--EEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEE
Q psy519 165 ITDGA----SVRVFSDHVSPVLSIAFSPCGK-Y--LASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLV 237 (351)
Q Consensus 165 ~~~~~----~~~~~~~~~~~i~~~~~~~~~~-~--l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 237 (351)
+++++ .......+...+..+.++|++. . +++++.++.|++||.+........ .+...+..+.|+|+++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV--DAHSQVCSILWSPHYKELI 256 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE--ECSSCEEEEEEETTTTEEE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc--cceeeeeeeeecccccceE
Confidence 98764 3445567888999999999664 3 345677899999999988877655 4567899999999999887
Q ss_pred EEe--CCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeeec
Q psy519 238 TGS--LTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMHE 290 (351)
Q Consensus 238 ~~~--~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
+++ .|+.|++||+++++.+.. ..+.+++|+|+|..+++++.|+. +++|+.
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~---v~iWd~ 313 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADET---LRLWRC 313 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE---EEEECC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe---EEEEEC
Confidence 654 799999999999988765 56778999999999999998885 555554
No 92
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.5e-36 Score=268.16 Aligned_cols=243 Identities=15% Similarity=0.235 Sum_probs=201.7
Q ss_pred CCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCe-----------eeEEeeCCC------------CCeEEEEEeCC
Q psy519 47 SGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMY-----------PLRIFVGHK------------QDVTCARFHPK 102 (351)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~-----------~~~~~~~~~------------~~i~~i~~~~~ 102 (351)
..+.+.|++++|+|+|.+ ++|+.||.|+||++.+++ ....+.+|. ..|.+++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 357899999999999988 999999999999998876 477888998 88999999999
Q ss_pred C--CEEEEEeCCCcEEEEeCCCCcee---------------------------------------EE-eccCCCCeEEEE
Q psy519 103 I--TYIGTGSYDKAVRLWSITDGASV---------------------------------------RV-FSDHVSPVLSIA 140 (351)
Q Consensus 103 ~--~~l~~~~~dg~i~i~d~~~~~~~---------------------------------------~~-~~~~~~~i~~~~ 140 (351)
+ ..|++++.|+.|++||+.+++.. .. ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 79999999999999998764432 12 357999999999
Q ss_pred EccCCCEEEEEecCCCCCeEEEEEccCC-ceeE-------EeccCCCCEEEEEECCCC-cEEEEEcCCCeEEEEEcCCCc
Q psy519 141 FSPCGKYLASGGTGSYDKAVRLWSITDG-ASVR-------VFSDHVSPVLSIAFSPCG-KYLASGGEDGLVLTHELTTGR 211 (351)
Q Consensus 141 ~~~~~~~l~~~~~~~~d~~i~i~d~~~~-~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~ 211 (351)
|+|++++|+++ . |+.|++||+++. +.+. .+..|...|.+++|+|++ ++|++++.||.|++||+++++
T Consensus 185 ~~~~~~~l~s~-~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 185 INSDYETYLSA-D---DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp ECTTSSEEEEE-C---SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EcCCCCEEEEe-C---CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 99999999998 6 999999999843 3333 255789999999999998 999999999999999999887
Q ss_pred E----EEEeeccCCC------------CEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cceeeeeecc------------
Q psy519 212 V----ISRFHLQEHE------------PVTSLVWSVTGETLVTGSLTGTVQFYGWPS-ASKIGIGVYP------------ 262 (351)
Q Consensus 212 ~----~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~------------ 262 (351)
. ...+. .+.. .|.+++|+|++++|++++. +.|++||++. ++.+.....+
T Consensus 261 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 261 LCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp SSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred cccceeeEec-cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 6 56554 3333 8999999999999999998 9999999987 6655443222
Q ss_pred --------eeEEecCCceeeeeeccceeeEEEeeeceeCceEEE
Q psy519 263 --------RCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVVV 298 (351)
Q Consensus 263 --------~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 298 (351)
.++|+|++..+++++.++ .+++|+..+++...+
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s~s~dg---~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMTGSYNN---FFRMFDRNTKRDITL 379 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEEECSTT---EEEEEETTTCCEEEE
T ss_pred ccccccceEEEECCCCCEEEEeccCC---EEEEEEcCCCcceee
Confidence 289999999998888876 677888877775543
No 93
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-37 Score=279.76 Aligned_cols=273 Identities=9% Similarity=0.018 Sum_probs=213.6
Q ss_pred CCCccceEEeeecCC----ccccEEEEecCCCceEEEecCCc----------------cCCCccceEEEEECCCCcEEEE
Q psy519 8 HGDHKHFIQNSFKPE----TVEDVLANLESQKNLQSRYLPYY----------------TSGHDMTVWSVEACSKGLALTG 67 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~----~~~~~l~~~~~~~~i~i~~~~~~----------------~~~~~~~i~~~~~~~~~~~~~~ 67 (351)
.+|...|.+++|+|+ ..+.+||+++.||+|++|++... +.+|...|++++|++++.+++|
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasg 283 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCG 283 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEE
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEE
Confidence 356788999999995 11579999999999999998643 3468899999999998777999
Q ss_pred eCCCcEEEEeCCCCe-eeEEeeCCCCCeEEE--EEeCCC-CEEEEEeCCCcEEEEeCCCCceeEEeccCCC--CeEEEEE
Q psy519 68 SRDTTARLWSLEQMY-PLRIFVGHKQDVTCA--RFHPKI-TYIGTGSYDKAVRLWSITDGASVRVFSDHVS--PVLSIAF 141 (351)
Q Consensus 68 ~~d~~i~vw~~~~~~-~~~~~~~~~~~i~~i--~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~~~~~ 141 (351)
+.||+|++||+++++ +...+.+|...|.++ +|+|++ .+|++++.|++|++||+++++....+.+|.. .|.+++|
T Consensus 284 s~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVY 363 (524)
T ss_dssp ETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEE
T ss_pred eCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEe
Confidence 999999999999764 455688999999999 568887 8999999999999999998887777666543 5789999
Q ss_pred ccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee----
Q psy519 142 SPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH---- 217 (351)
Q Consensus 142 ~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---- 217 (351)
+|+++.+++++. |+.|++||++++..+..+.+|...|.+++|+|++++|++|+.||.|++||+..+ .+....
T Consensus 364 sp~~~~l~s~~~---d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~ 439 (524)
T 2j04_B 364 CPQIYSYIYSDG---ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSA 439 (524)
T ss_dssp ETTTTEEEEECS---SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC-----
T ss_pred CCCcCeEEEeCC---CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCcc
Confidence 999999999988 999999999999988888899999999999999999999999999999998653 221111
Q ss_pred ccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCcee-----eeeecceeEEecCCc---eeeeeeccceeeEEEe
Q psy519 218 LQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWP-SASKI-----GIGVYPRCAAQPVGF---EAATLAANSRVRTLRE 287 (351)
Q Consensus 218 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~-----~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~ 287 (351)
......+.+++|+|+++.+. ... .+.+|+.. ++..+ +...+.+++|+|++. .++++..++.++.+.+
T Consensus 440 ~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 440 TQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp -CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred ceeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEc
Confidence 01112477999999998553 222 23344332 23222 236788999999965 7788777775544443
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.7e-38 Score=273.22 Aligned_cols=227 Identities=16% Similarity=0.138 Sum_probs=191.8
Q ss_pred CccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC--eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc-
Q psy519 49 HDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM--YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA- 124 (351)
Q Consensus 49 ~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~- 124 (351)
+.++|++++|+|++.+ ++++.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 5678999999999988 88889999999999988 7788889999999999999999999999999999999999877
Q ss_pred --eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc---eeEEecc-CCCCEEEEEECCCCcEEEEEcC
Q psy519 125 --SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA---SVRVFSD-HVSPVLSIAFSPCGKYLASGGE 198 (351)
Q Consensus 125 --~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~ 198 (351)
....+..|...|.+++|+|++++|++++. |+.|++||+++++ ....+.. |...|.+++|+|++++|++++.
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSG---ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEES---SSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEec---CCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 66777889999999999999999999999 9999999999876 4677777 9999999999999999999999
Q ss_pred CCeEEEEEcCC------------------CcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----e
Q psy519 199 DGLVLTHELTT------------------GRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASK----I 256 (351)
Q Consensus 199 dg~i~i~d~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~----~ 256 (351)
|+.|++||++. ++.+..+ .|...|.+++|+|++++|++++.||.|++||+.+++. +
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 99999999853 3344444 6678899999999999999999999999999998876 3
Q ss_pred ee-----eecceeEEecCCceeeeeeccc
Q psy519 257 GI-----GVYPRCAAQPVGFEAATLAANS 280 (351)
Q Consensus 257 ~~-----~~~~~~~~s~~~~~~~~~~~~~ 280 (351)
.. ..+..++|+|++..++++..++
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 273 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYS 273 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSS
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCc
Confidence 22 4567899999999988776554
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-36 Score=288.79 Aligned_cols=244 Identities=18% Similarity=0.266 Sum_probs=212.1
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCC--CcE-EEEeCCCcEE
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSK--GLA-LTGSRDTTAR 74 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~--~~~-~~~~~d~~i~ 74 (351)
.+..+|..+|.+++|+|+ +++|++|+.||.|++|++... +.+|...|++++|+++ +.+ ++++.||.|+
T Consensus 3 ~~l~gH~~~V~~l~~s~d--g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYY--GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -----CCCCEEEECCCSS--SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eecccCcceeEEEEECCC--CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 467899999999999999 999999999999999999743 6789999999999987 776 9999999999
Q ss_pred EEeCCCCe--eeEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCcEEEEeCCCCc--eeEEeccCCCCeEEEEEcc-----
Q psy519 75 LWSLEQMY--PLRIFVGHKQDVTCARFHPK--ITYIGTGSYDKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSP----- 143 (351)
Q Consensus 75 vw~~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~----- 143 (351)
+||+.+++ .+..+.+|...|.+++|+|+ ++.+++++.||.|++||++++. ....+..|...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999886 67778889999999999999 9999999999999999998873 4455677999999999999
Q ss_pred --------CCCEEEEEecCCCCCeEEEEEccCC----ceeEEeccCCCCEEEEEECCC---CcEEEEEcCCCeEEEEEcC
Q psy519 144 --------CGKYLASGGTGSYDKAVRLWSITDG----ASVRVFSDHVSPVLSIAFSPC---GKYLASGGEDGLVLTHELT 208 (351)
Q Consensus 144 --------~~~~l~~~~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~ 208 (351)
++.++++++. ||.|++||++++ .....+..|..+|.+++|+|+ ++++++++.||.|++||++
T Consensus 161 ~~~~~~~~d~~~l~sgs~---dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ------CGGGCCEEEEET---TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred ccccccCCCCCEEEEEEC---CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 5899999999 999999999987 455677889999999999999 8999999999999999998
Q ss_pred CCcEEEE--e--eccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy519 209 TGRVISR--F--HLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 209 ~~~~~~~--~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
+++.... . ...+...+.+++|+|++++|++++.||.|++|++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 8642111 1 1235578999999999999999999999999999854
No 96
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-35 Score=261.54 Aligned_cols=274 Identities=16% Similarity=0.181 Sum_probs=228.4
Q ss_pred cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCe------eeEEeeCCCCCeEEEEEeCC----C---CEEEEEeCC
Q psy519 46 TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMY------PLRIFVGHKQDVTCARFHPK----I---TYIGTGSYD 112 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~------~~~~~~~~~~~i~~i~~~~~----~---~~l~~~~~d 112 (351)
+.+|...|++++|+| ..+++++.|+.|++|++.+++ .+..+.+|...|.+++|+|+ + ++|++++.|
T Consensus 12 ~~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 12 GKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS 90 (397)
T ss_dssp SSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred hhhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCC
Confidence 678999999999999 556999999999999999887 67888899999999999999 9 999999999
Q ss_pred CcEEEEeCCCCce-----eEEeccC-----CCCeEEEEEc----cCCCE-EEEEecCCCCCeEEEEEccC------Ccee
Q psy519 113 KAVRLWSITDGAS-----VRVFSDH-----VSPVLSIAFS----PCGKY-LASGGTGSYDKAVRLWSITD------GASV 171 (351)
Q Consensus 113 g~i~i~d~~~~~~-----~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~~~~d~~i~i~d~~~------~~~~ 171 (351)
|.|++||+.+++. ...+..| ...|.+++|+ |++++ |++++. |+.|++||+++ ++.+
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV---KGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET---TSCEEEEEEESSSSHHHHTTT
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC---CCcEEEEeCCcccccccccee
Confidence 9999999998887 7888888 5999999999 99999 999998 99999999998 6655
Q ss_pred E-----Ee-------ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc--C---CCCEEEEEEcCCCC
Q psy519 172 R-----VF-------SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ--E---HEPVTSLVWSVTGE 234 (351)
Q Consensus 172 ~-----~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~~v~~~~~~~~~~ 234 (351)
. .+ ..|...+.+++|+|++ ++++++.||.|++||+++++.+..+... | ...+.+++|+|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~ 246 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 246 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC
Confidence 5 66 4488899999999999 9999999999999999999988887631 5 77899999999999
Q ss_pred EEEEEeCC---CeEEEEeCCCCceeeee------------------ecceeEEecCCceeeeeeccceeeEEEeeeceeC
Q psy519 235 TLVTGSLT---GTVQFYGWPSASKIGIG------------------VYPRCAAQPVGFEAATLAANSRVRTLREMHEIVG 293 (351)
Q Consensus 235 ~l~~~~~d---g~i~i~~~~~~~~~~~~------------------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g 293 (351)
+|++++.| |.|++||+.+++.+... .+..++|+|++..+++++.++. +++|+..++
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~---i~iwd~~~~ 323 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK---LRFWDVKTK 323 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE---EEEEETTTT
T ss_pred EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe---EEEEEcCCC
Confidence 99999999 99999999988766543 3567999999999999988875 555555444
Q ss_pred ce-----------------------------EEEeeEEEEecCCc----------eeeccEEEecCCccccceeee
Q psy519 294 PV-----------------------------VVVESFIVEIRPDK----------WYEANLIVLDDDLKECNLETY 330 (351)
Q Consensus 294 ~~-----------------------------~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~ 330 (351)
+. ..+.. +.|+|++ .+.... ..+..++.|+++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~--~~~~~~g~~~~~~~~~~~~l~s~-~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 324 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD--VKFLKKGWRSGMGADLNESLCCV-CLDRSIRWFREAGG 396 (397)
T ss_dssp EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEE--EEEECTTTSBSTTCTTSCEEEEE-ETTTEEEEEEEEC-
T ss_pred ceeEEEecccCcccchhhhhccccccccccCCceeE--EEeccccccccccccccceEEEe-cCCCcEEEEEcCCC
Confidence 32 22333 6889997 333322 46788999988764
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-35 Score=248.33 Aligned_cols=238 Identities=21% Similarity=0.274 Sum_probs=211.7
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc--------cCCCccceEEEEECCCCcEEEEeCCCcEEEEeC
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--------TSGHDMTVWSVEACSKGLALTGSRDTTARLWSL 78 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~ 78 (351)
...|...|.+++|+|+ +++|++++.|+.+++|++... ..+|...|.++.|. .+.+++++.|+.|++||
T Consensus 55 ~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~d~~i~~~d- 130 (313)
T 3odt_A 55 VYTGQGFLNSVCYDSE--KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ-DGVVISGSWDKTAKVWK- 130 (313)
T ss_dssp EEECSSCEEEEEEETT--TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEE-
T ss_pred eecCCccEEEEEECCC--CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec-CCEEEEEeCCCCEEEEc-
Confidence 3467899999999999 999999999999999998765 66799999999993 33449999999999999
Q ss_pred CCCeeeEEeeCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCceeEEecc-CCCCeEEEEEccCCCEEEEEecCCC
Q psy519 79 EQMYPLRIFVGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSITDGASVRVFSD-HVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
.++....+..|...+.+++|+| +++.+++++.||.|++|| ..+....+.. +...+.+++|+|++. +++++.
T Consensus 131 -~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~--- 203 (313)
T 3odt_A 131 -EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSN--- 203 (313)
T ss_dssp -TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEET---
T ss_pred -CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccC---
Confidence 6777888889999999999988 899999999999999999 4556666666 889999999999988 888888
Q ss_pred CCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEE
Q psy519 157 DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETL 236 (351)
Q Consensus 157 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 236 (351)
|+.|++||+++++.+..+..|..++.+++|+|++ .+++++.||.|++||+++++.+..+. .+...+.+++|+|+++ +
T Consensus 204 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~ 280 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVIT-LPAISIWSVDCMSNGD-I 280 (313)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEE-CSSSCEEEEEECTTSC-E
T ss_pred CCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEe-ccCceEEEEEEccCCC-E
Confidence 9999999999999999999999999999999999 58899999999999999999888886 4567999999999998 5
Q ss_pred EEEeCCCeEEEEeCCCCceeee
Q psy519 237 VTGSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 237 ~~~~~dg~i~i~~~~~~~~~~~ 258 (351)
++++.||.|++||+++++....
T Consensus 281 ~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 281 IVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEEETTSCEEEEESCGGGCCC-
T ss_pred EEEeCCCcEEEEeCCCCceeeh
Confidence 6788999999999998766543
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-36 Score=268.42 Aligned_cols=263 Identities=13% Similarity=0.143 Sum_probs=214.7
Q ss_pred eeecCCccccEEEEecCCCceEEEecCCc----c-CCCccceEEEEECC-CCcE-EEEeCCCcEEEEeCCC---Ce---e
Q psy519 17 NSFKPETVEDVLANLESQKNLQSRYLPYY----T-SGHDMTVWSVEACS-KGLA-LTGSRDTTARLWSLEQ---MY---P 83 (351)
Q Consensus 17 ~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~-~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~~~---~~---~ 83 (351)
..|+|+ ++.++++. .|+.... + .+|.+.|++++|+| ++.+ ++|+.|++|++||+.+ +. .
T Consensus 33 ~~f~~~--~~~~~~~~------~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 104 (437)
T 3gre_A 33 KEFGPI--QEIVRSPN------MGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSS 104 (437)
T ss_dssp GGGCCC--CCCCCCCC------GGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSC
T ss_pred hhcCCc--cccccccc------cccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccce
Confidence 357777 77777654 3665544 3 78999999999999 8877 9999999999999876 33 2
Q ss_pred eEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCC---CCceeEEec----------c--CCCCeEEEE--EccCCC
Q psy519 84 LRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSIT---DGASVRVFS----------D--HVSPVLSIA--FSPCGK 146 (351)
Q Consensus 84 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~----------~--~~~~i~~~~--~~~~~~ 146 (351)
...+ .|...|.+++|+|++++|++++.||.|++||+. +++....+. . +...+.++. ++++++
T Consensus 105 ~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 105 SLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp SEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred eeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 3333 589999999999999999999999999999995 454443332 1 455667776 567899
Q ss_pred EEEEEecCCCCCeEEEEEccCCceeEEecc--CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCE
Q psy519 147 YLASGGTGSYDKAVRLWSITDGASVRVFSD--HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPV 224 (351)
Q Consensus 147 ~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 224 (351)
++++++. |+.|++||+++++.+..+.. |...|.+++|+|++++|++++.||.|++||+++++.+..+...+...|
T Consensus 184 ~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 260 (437)
T 3gre_A 184 LLVALTN---LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI 260 (437)
T ss_dssp EEEEEET---TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE
T ss_pred EEEEEeC---CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce
Confidence 9999999 99999999999999999987 889999999999999999999999999999999999888876777899
Q ss_pred EEEEEcC----CCCEEEEEeCCCeEEEEeCCCCceeeeee-------------------------------cceeEEecC
Q psy519 225 TSLVWSV----TGETLVTGSLTGTVQFYGWPSASKIGIGV-------------------------------YPRCAAQPV 269 (351)
Q Consensus 225 ~~~~~~~----~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-------------------------------~~~~~~s~~ 269 (351)
.+++|+| ++.+|++++.||.|++||+++++.+.... +..++|+ +
T Consensus 261 ~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 261 THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 9996665 67799999999999999999887654322 5567788 6
Q ss_pred CceeeeeeccceeeEEEeeeceeCce
Q psy519 270 GFEAATLAANSRVRTLREMHEIVGPV 295 (351)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~ 295 (351)
+..+++++.++ .+++|+..+++.
T Consensus 340 ~~~l~s~~~d~---~i~~wd~~~~~~ 362 (437)
T 3gre_A 340 DKILLTDEATS---SIVMFSLNELSS 362 (437)
T ss_dssp TEEEEEEGGGT---EEEEEETTCGGG
T ss_pred ceEEEecCCCC---eEEEEECCCccc
Confidence 67788887776 567777766653
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.1e-35 Score=258.13 Aligned_cols=243 Identities=22% Similarity=0.322 Sum_probs=211.1
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM 81 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~ 81 (351)
++|...|.+|+|+|+ |++||+|+.||.|++|++... ..+|...+.++.++ +.+ ++|+.|+.+++||....
T Consensus 144 ~~~~~~V~sv~fspd--g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 144 EQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp CSTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS
T ss_pred cCCCCcEEEEEECCC--CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccc
Confidence 567889999999999 999999999999999999887 77899999999885 445 99999999999998764
Q ss_pred -eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc----eeEEeccCCCCeEEEEEccCCCEEEEEecCCC
Q psy519 82 -YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA----SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 82 -~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
..+..+.+|...+..+.|+|+++++++++.|+.+++|+..+++ .+.....|...|.+++|+|.+..+++.+.++.
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 4567788999999999999999999999999999999998765 34566778999999999997654443323344
Q ss_pred CCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEc--CCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCC
Q psy519 157 DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGG--EDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGE 234 (351)
Q Consensus 157 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 234 (351)
|+.|++||+++++....+..+ ..+.++.|+|+++.+++++ .|+.|++||+.+++.+..+. .|...|.+++|+|+|+
T Consensus 300 D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~-gH~~~V~~l~~spdg~ 377 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGA 377 (420)
T ss_dssp TCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS
T ss_pred CCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCC
Confidence 999999999999988888654 5788999999999888765 68999999999999999886 5778999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCcee
Q psy519 235 TLVTGSLTGTVQFYGWPSASKI 256 (351)
Q Consensus 235 ~l~~~~~dg~i~i~~~~~~~~~ 256 (351)
+|++|+.|++|+|||+......
T Consensus 378 ~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 378 TVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp CEEEEETTTEEEEECCSCSSCC
T ss_pred EEEEEecCCeEEEEECCCCCcc
Confidence 9999999999999999765443
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.2e-36 Score=258.07 Aligned_cols=275 Identities=14% Similarity=0.191 Sum_probs=224.1
Q ss_pred cCCCccceEEEEECCCCc-E-EEEeC---CCcEEEEeCCCCeeeEEe-eCCCCCeEEEEEeCC---CCEEEEEeCCCcEE
Q psy519 46 TSGHDMTVWSVEACSKGL-A-LTGSR---DTTARLWSLEQMYPLRIF-VGHKQDVTCARFHPK---ITYIGTGSYDKAVR 116 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~-~-~~~~~---d~~i~vw~~~~~~~~~~~-~~~~~~i~~i~~~~~---~~~l~~~~~dg~i~ 116 (351)
..+|...|.+++|+|++. + ++++. |+.|++||+.+++..... .+|...|.+++|+|+ +++|++++.||.|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 356999999999999985 4 55655 999999999988765443 378899999999998 69999999999999
Q ss_pred EEeCCCCc-eeEEeccCCCCeEEEEE------ccCCCEEEEEecCCCCCeEEEEEccCCc-eeEEeccCCC----CEEEE
Q psy519 117 LWSITDGA-SVRVFSDHVSPVLSIAF------SPCGKYLASGGTGSYDKAVRLWSITDGA-SVRVFSDHVS----PVLSI 184 (351)
Q Consensus 117 i~d~~~~~-~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~~~~d~~i~i~d~~~~~-~~~~~~~~~~----~i~~~ 184 (351)
+||+.+++ .+..+.+|...|.+++| +|++++|++++. |+.|++||+++++ .+..+..+.. .+.++
T Consensus 94 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 94 IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET---TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC---CCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999988 88889999999999954 789999999999 9999999999886 6777766554 78888
Q ss_pred E----ECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCcee-
Q psy519 185 A----FSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSV---TGETLVTGSLTGTVQFYGWPSASKI- 256 (351)
Q Consensus 185 ~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~~~~~~~~~- 256 (351)
+ |+|+++++++++.||.|++||+++++..... .+...+.+++|+| ++.+|++++.||.|++||+++++..
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 8 7889999999999999999999998875543 5678999999999 9999999999999999999876543
Q ss_pred ---------eeeecceeEEecCCc-eeeeeeccceeeEEEeeeceeC---------------------------ceEEEe
Q psy519 257 ---------GIGVYPRCAAQPVGF-EAATLAANSRVRTLREMHEIVG---------------------------PVVVVE 299 (351)
Q Consensus 257 ---------~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~g---------------------------~~~~~~ 299 (351)
+...+..++|+|++. .+++++.++.+ ++|+...+ +...+.
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i---~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGL---HLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE---EEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcE---EEeecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 224567899999998 78888888755 45554322 222333
Q ss_pred eEEEEecCCceeeccEEEecCCccccceeee
Q psy519 300 SFIVEIRPDKWYEANLIVLDDDLKECNLETY 330 (351)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 330 (351)
+ +.|+|++.+.......+..++.|+++..
T Consensus 326 ~--~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 326 S--LDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp E--EEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred E--EEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 3 6899999887644467889999998764
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-35 Score=262.55 Aligned_cols=258 Identities=12% Similarity=0.044 Sum_probs=217.2
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCcc--------C-----------------------------------
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYYT--------S----------------------------------- 47 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~~--------~----------------------------------- 47 (351)
..++.+++|+|+ |++|+++ .++.|++|++.++. .
T Consensus 4 ~~p~~~v~~s~d--g~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (450)
T 2vdu_B 4 IHPLQNLLTSRD--GSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNK 80 (450)
T ss_dssp ECCCCEEEECSS--SSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred cccEEEEEecCC--CCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCc
Confidence 357889999999 9976665 57899999975541 1
Q ss_pred -------------------CCccceEEEEECCCCcE--EEEeCCCcEEEEeCC--CCeeeEEee--CCCCCeEEEEEeCC
Q psy519 48 -------------------GHDMTVWSVEACSKGLA--LTGSRDTTARLWSLE--QMYPLRIFV--GHKQDVTCARFHPK 102 (351)
Q Consensus 48 -------------------~~~~~i~~~~~~~~~~~--~~~~~d~~i~vw~~~--~~~~~~~~~--~~~~~i~~i~~~~~ 102 (351)
+|.+.|++++|+|++.+ ++++.|+.|++||+. +++.+..+. .|...|.+++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 81 GDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred CccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 23447999999999976 678899999999999 888887775 56789999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeE----EeccCCCCeEEEEEccC---CCEEEEEecCCCCCeEEEEEccCCceeEE-e
Q psy519 103 ITYIGTGSYDKAVRLWSITDGASVR----VFSDHVSPVLSIAFSPC---GKYLASGGTGSYDKAVRLWSITDGASVRV-F 174 (351)
Q Consensus 103 ~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~~~~d~~i~i~d~~~~~~~~~-~ 174 (351)
+++|++++.+|.+++|++.+++... .+.+|...|.+++|+|+ +++|++++. |+.|++||+++++.+.. +
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR---DEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET---TSCEEEEEESCTTCEEEEC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC---CCcEEEEECCCCceeeeee
Confidence 9999999999999999998877554 67789999999999999 999999998 99999999999988877 5
Q ss_pred ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc------------------------CCCCEEEEEEc
Q psy519 175 SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ------------------------EHEPVTSLVWS 230 (351)
Q Consensus 175 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------------~~~~v~~~~~~ 230 (351)
.+|...|.+++|+ ++++|++++.|+.|++||+++++.+..+... ....+..++|+
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 6899999999999 9999999999999999999999988877532 23568999999
Q ss_pred CCCCEEEEEe-CCCeEEEEeC--CCC---ceeee----eecceeEEecCCceeee
Q psy519 231 VTGETLVTGS-LTGTVQFYGW--PSA---SKIGI----GVYPRCAAQPVGFEAAT 275 (351)
Q Consensus 231 ~~~~~l~~~~-~dg~i~i~~~--~~~---~~~~~----~~~~~~~~s~~~~~~~~ 275 (351)
|++++|++++ .|+.|++|++ ..+ +.+.. ..+..++|+|++..++.
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTL 371 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEE
Confidence 9999999998 8999999999 554 33322 45678999996443333
No 102
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-35 Score=257.42 Aligned_cols=240 Identities=20% Similarity=0.257 Sum_probs=207.4
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC--CCeeeEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCcEEEEeC
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE--QMYPLRIFVGHKQDVTCARFHPK--ITYIGTGSYDKAVRLWSI 120 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~ 120 (351)
+.+|...|++++|+|++.+ ++++.|+.|++|++. +++.+..+.+|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 4689999999999999987 999999999999998 66777888899999999999987 899999999999999999
Q ss_pred CCCc--eeEEeccCCCCeEEEEEccC--CCEEEEEecCCCCCeEEEEEccCCc--eeEEeccCCCCEEEEEECC------
Q psy519 121 TDGA--SVRVFSDHVSPVLSIAFSPC--GKYLASGGTGSYDKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSP------ 188 (351)
Q Consensus 121 ~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~------ 188 (351)
.+++ .+..+..|...|.+++|+|+ ++++++++. |+.|++||++++. ....+..|...|.+++|+|
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC---CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 9987 67777889999999999999 999999999 9999999998873 4456678999999999999
Q ss_pred -------CCcEEEEEcCCCeEEEEEcCCCcEE----EEeeccCCCCEEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCc
Q psy519 189 -------CGKYLASGGEDGLVLTHELTTGRVI----SRFHLQEHEPVTSLVWSVT---GETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 189 -------~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~~~~~~~ 254 (351)
++.++++++.||.|++||++++... ..+. .|...|.+++|+|+ +++|++++.||.|++||+.+++
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 6999999999999999999876532 3332 46688999999999 8999999999999999999864
Q ss_pred ee----------eeeecceeEEecCCceeeeeeccceeeEEEeeecee
Q psy519 255 KI----------GIGVYPRCAAQPVGFEAATLAANSRVRTLREMHEIV 292 (351)
Q Consensus 255 ~~----------~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (351)
.. ....+..++|+|++..+++++.++. +++|+...
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~---i~iw~~~~ 287 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK---VTLWKENL 287 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSS---EEEEEEEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCc---EEEEeCCC
Confidence 11 1245678899999999999988875 45555543
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=256.39 Aligned_cols=262 Identities=11% Similarity=0.037 Sum_probs=208.8
Q ss_pred EeeecCCccccEEEEecCCCceEEEecCCc---cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCC---------CCee
Q psy519 16 QNSFKPETVEDVLANLESQKNLQSRYLPYY---TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLE---------QMYP 83 (351)
Q Consensus 16 ~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~---------~~~~ 83 (351)
...+.++ +.+|++|+.||.|++||+... ..-....|.++.|+|+ +++++.|++|++|+.. +++.
T Consensus 41 ~~~~~~d--~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 41 NKSMYYD--KWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp CSSSSEE--EEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhhhcCC--CCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 3455567 899999999999999999876 1112466777888888 9999999999999765 4444
Q ss_pred eEEee-CCCCCeEEEEEeC--CCCEEEEEeCCCcEEEEeCCCCceeEEec-cCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 84 LRIFV-GHKQDVTCARFHP--KITYIGTGSYDKAVRLWSITDGASVRVFS-DHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 84 ~~~~~-~~~~~i~~i~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
+..+. +|...|.+++|+| +++++++++.||.|++||+++++...... .+...+.+++|+|++.+|++|+. |+.
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~---dg~ 193 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP---DGI 193 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT---TSC
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC---CCE
Confidence 44443 6778899999999 99999999999999999999998876663 35568999999999999999998 999
Q ss_pred EEEEEccCCcee-EEecc-CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeec--cCCCCE--EEEEEcCCC
Q psy519 160 VRLWSITDGASV-RVFSD-HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHL--QEHEPV--TSLVWSVTG 233 (351)
Q Consensus 160 i~i~d~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v--~~~~~~~~~ 233 (351)
|++||+++++.+ ..+.. |..+|.+++|+|++.+|++++ ++.|++||+++++.+..+.. .+...+ .+++|+|++
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 999999999887 78887 999999999999999999999 55999999998876544321 011223 469999999
Q ss_pred CEEEEEeC-CCeEEEEeCCCCcee-eeeecceeEEec---CCceeeeeeccceeeEE
Q psy519 234 ETLVTGSL-TGTVQFYGWPSASKI-GIGVYPRCAAQP---VGFEAATLAANSRVRTL 285 (351)
Q Consensus 234 ~~l~~~~~-dg~i~i~~~~~~~~~-~~~~~~~~~~s~---~~~~~~~~~~~~~~~~~ 285 (351)
++|++++. |+.+++|++...... ....+..+.|+| ++..++++..++.+..+
T Consensus 273 ~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 273 KNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred CEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEE
Confidence 99999998 999999999765432 335566778888 77888888888765543
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.1e-35 Score=262.61 Aligned_cols=241 Identities=19% Similarity=0.337 Sum_probs=209.1
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCC----------c-----cCCCccceEEEEECCCCc-E-EEEeCC
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPY----------Y-----TSGHDMTVWSVEACSKGL-A-LTGSRD 70 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~----------~-----~~~~~~~i~~~~~~~~~~-~-~~~~~d 70 (351)
.+|...|.+++|+|+. +.+|++++.+|.|++|++.. . +.+|...|.+++|+|++. + ++++.|
T Consensus 125 ~~h~~~v~~l~~~p~~-~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 125 INHEGEVNRARYMPQN-ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEESSCCSEEEEETTE-EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EcCCCcEEEEEECCCC-CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 5688999999999961 57899999999999999986 2 568999999999999987 5 999999
Q ss_pred CcEEEEeCCCCee-------eEEeeCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeCCCC---ceeEEeccCCCCeEEE
Q psy519 71 TTARLWSLEQMYP-------LRIFVGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSITDG---ASVRVFSDHVSPVLSI 139 (351)
Q Consensus 71 ~~i~vw~~~~~~~-------~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~i~~~ 139 (351)
|.|++|++.++.. ...+.+|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...|+++
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEE
T ss_pred CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEE
Confidence 9999999987322 456678999999999999 7789999999999999999987 5677778899999999
Q ss_pred EEccCCC-EEEEEecCCCCCeEEEEEccC-CceeEEeccCCCCEEEEEECCCCc-EEEEEcCCCeEEEEEcCCC------
Q psy519 140 AFSPCGK-YLASGGTGSYDKAVRLWSITD-GASVRVFSDHVSPVLSIAFSPCGK-YLASGGEDGLVLTHELTTG------ 210 (351)
Q Consensus 140 ~~~~~~~-~l~~~~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~------ 210 (351)
+|+|++. ++++++. |+.|++||+++ ...+..+..|...|.+++|+|+++ +|++++.|+.|++||+...
T Consensus 284 ~~~p~~~~~l~tg~~---dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 284 SFNPYSEFILATGSA---DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EECSSCTTEEEEEET---TSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EeCCCCCCEEEEEeC---CCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 9999887 6888888 99999999998 567888889999999999999885 7999999999999999862
Q ss_pred --------cEEEEeeccCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCC
Q psy519 211 --------RVISRFHLQEHEPVTSLVWSVTGE-TLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 211 --------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~ 253 (351)
+.+..+. .|...|.+++|+|+++ +|++++.||.|++|++...
T Consensus 361 ~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 361 EDAEDGPPELLFIHG-GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHCCTTEEEECC-CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccccCCcceEEEcC-CCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 4444432 4567899999999999 8999999999999998754
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2e-35 Score=260.51 Aligned_cols=247 Identities=18% Similarity=0.207 Sum_probs=210.1
Q ss_pred cCCCCccceEEeeecC-CccccEEEEecCCCceEEEecCCc------------cCCCccceEEEEECCCC-cE-EEEeCC
Q psy519 6 LNHGDHKHFIQNSFKP-ETVEDVLANLESQKNLQSRYLPYY------------TSGHDMTVWSVEACSKG-LA-LTGSRD 70 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp-~~~~~~l~~~~~~~~i~i~~~~~~------------~~~~~~~i~~~~~~~~~-~~-~~~~~d 70 (351)
...+|...|.+++|+| + +++|++++.||.|++|++... +.+|...|.+++|+|++ .+ ++++.|
T Consensus 76 ~~~~h~~~V~~~~~~p~~--~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHN--DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CBCCCSSCEEEEEECTTC--TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred eEecCCCCEEEEEeCCCC--CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 4568999999999999 8 999999999999999998764 55799999999999997 45 999999
Q ss_pred CcEEEEeCCCCeeeEEe--eCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe-ccCCCC-eEEEEEccCCC
Q psy519 71 TTARLWSLEQMYPLRIF--VGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF-SDHVSP-VLSIAFSPCGK 146 (351)
Q Consensus 71 ~~i~vw~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~ 146 (351)
+.|++||+++++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|... +.+++|+|+++
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 99999999999999888 789999999999999999999999999999999999998888 677765 89999999999
Q ss_pred EEEEEecCCCCCeEEEEEccCCce-eEEec-cCCCCEEEEEECCCCcEEE-EEcCCCeEEEEEcCCCcE-EEEee-ccCC
Q psy519 147 YLASGGTGSYDKAVRLWSITDGAS-VRVFS-DHVSPVLSIAFSPCGKYLA-SGGEDGLVLTHELTTGRV-ISRFH-LQEH 221 (351)
Q Consensus 147 ~l~~~~~~~~d~~i~i~d~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~-~~~~~-~~~~ 221 (351)
+++++...+.|+.|++||+++++. +.... .+...+..++|+|++++++ +++.||.|++||+.+++. +..+. ..+.
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~ 313 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSK 313 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCS
T ss_pred EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccC
Confidence 999983111299999999988754 33332 4677899999999999886 556799999999998873 33332 2345
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy519 222 EPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKI 256 (351)
Q Consensus 222 ~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~ 256 (351)
..+.+++|+|++.++++ .++.+++|++.+++..
T Consensus 314 ~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 314 ESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp SCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred CcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence 88999999999998764 4669999999886543
No 106
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-34 Score=249.52 Aligned_cols=204 Identities=21% Similarity=0.374 Sum_probs=179.0
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC----eeeEEeeCCCCCeEEEEEeC--CCCEEEEEeCCCcEEEE
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM----YPLRIFVGHKQDVTCARFHP--KITYIGTGSYDKAVRLW 118 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~i~~i~~~~--~~~~l~~~~~dg~i~i~ 118 (351)
+.+|.+.|++++|+|++.+ ++++.|+.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 5689999999999999987 99999999999999876 46677789999999999999 69999999999999999
Q ss_pred eCCCC---------ceeEEeccCCCCeEEEEEccC--CCEEEEEecCCCCCeEEEEEccCCceeEEec------------
Q psy519 119 SITDG---------ASVRVFSDHVSPVLSIAFSPC--GKYLASGGTGSYDKAVRLWSITDGASVRVFS------------ 175 (351)
Q Consensus 119 d~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~------------ 175 (351)
|++++ +.+..+..|...|.+++|+|+ ++++++++. |+.|++||+++++.+..+.
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN---DGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC---CCcEEEecCCChHHhcccccccccccccccc
Confidence 99887 557778889999999999999 999999999 9999999998876543322
Q ss_pred -cCCCCEEEEEECCC---CcEEEEEcCCCeEEEEEcCCCcE--EEEeeccCCCCEEEEEEcCCC----CEEEEEeCCCeE
Q psy519 176 -DHVSPVLSIAFSPC---GKYLASGGEDGLVLTHELTTGRV--ISRFHLQEHEPVTSLVWSVTG----ETLVTGSLTGTV 245 (351)
Q Consensus 176 -~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i 245 (351)
.|...+.+++|+|+ +.++++++.++.+.+|+...++. +..+. .|...|.+++|+|++ ++|++++.||.|
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 57788999999997 89999999999998888877765 33332 466899999999998 899999999999
Q ss_pred EEEeCCCC
Q psy519 246 QFYGWPSA 253 (351)
Q Consensus 246 ~i~~~~~~ 253 (351)
++||+..+
T Consensus 243 ~iwd~~~~ 250 (351)
T 3f3f_A 243 RIFKITEK 250 (351)
T ss_dssp EEEEEEEC
T ss_pred EEEeCCCC
Confidence 99999875
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=254.06 Aligned_cols=290 Identities=16% Similarity=0.222 Sum_probs=229.4
Q ss_pred CCceEEEecCCc-----cCCCccceEEEEECC-CCcE-EEEeCCCcEEEEeCCCCeeeEEee-------------CCCCC
Q psy519 34 QKNLQSRYLPYY-----TSGHDMTVWSVEACS-KGLA-LTGSRDTTARLWSLEQMYPLRIFV-------------GHKQD 93 (351)
Q Consensus 34 ~~~i~i~~~~~~-----~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~~~~~~~~~~~-------------~~~~~ 93 (351)
++.+++|++... ..+|.+.|++++|+| ++.+ ++++.||.|++||+.+++....+. +|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 445667776654 678999999999999 8887 999999999999999876554443 58999
Q ss_pred eEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccC---CCEEEEEecCCCCCeEEEEEccCCc
Q psy519 94 VTCARFHP-KITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC---GKYLASGGTGSYDKAVRLWSITDGA 169 (351)
Q Consensus 94 i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~~~~d~~i~i~d~~~~~ 169 (351)
|.+++|+| ++.+|++++.||.|++||+.+++....+. +...+.++.++|. +.++++++. ++.|++||+++++
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~d~~~~~ 177 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTR---GPKVQLCDLKSGS 177 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEES---SSSEEEEESSSSC
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcC---CCeEEEEeCCCcc
Confidence 99999999 77899999999999999999998888876 7788999999984 459999998 9999999999999
Q ss_pred eeEEeccCCCCEEEEEECCCCc-EEEEEcCCCeEEEEEcCCCc-EEEEee--------------ccCCCCEEEEEEcCCC
Q psy519 170 SVRVFSDHVSPVLSIAFSPCGK-YLASGGEDGLVLTHELTTGR-VISRFH--------------LQEHEPVTSLVWSVTG 233 (351)
Q Consensus 170 ~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~--------------~~~~~~v~~~~~~~~~ 233 (351)
.+..+..|...|.+++|+|+++ ++++++.||.|++||++++. .+..+. ..+...|.+++|+|++
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 257 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG 257 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC
Confidence 9999999999999999999998 58999999999999998765 333221 2455789999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeee---------cceeEE-ecCCceeeeeeccceeeEEEeeeceeCceE-------
Q psy519 234 ETLVTGSLTGTVQFYGWPSASKIGIGV---------YPRCAA-QPVGFEAATLAANSRVRTLREMHEIVGPVV------- 296 (351)
Q Consensus 234 ~~l~~~~~dg~i~i~~~~~~~~~~~~~---------~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------- 296 (351)
++|++++.||.|++||+.+++...... .....+ ...+..++++..++ .+++|+..++...
T Consensus 258 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~v~d~~~~~~~~~~~~~~ 334 (408)
T 4a11_B 258 LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS---TIAVYTVYSGEQITMLKGHY 334 (408)
T ss_dssp SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT---EEEEEETTTCCEEEEECCCS
T ss_pred CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC---EEEEEECcCCcceeeeccCC
Confidence 999999999999999999887653211 111222 22344556666665 5667776555433
Q ss_pred -EEeeEEEEecCCceeeccEEEecCCccccceeeeeee
Q psy519 297 -VVESFIVEIRPDKWYEANLIVLDDDLKECNLETYSQM 333 (351)
Q Consensus 297 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 333 (351)
.+.+ +.|+|++.++... ..+..++.|++++....
T Consensus 335 ~~v~~--~~~s~~~~~l~s~-~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 335 KTVDC--CVFQSNFQELYSG-SRDCNILAWVPSLYEPV 369 (408)
T ss_dssp SCEEE--EEEETTTTEEEEE-ETTSCEEEEEECC----
T ss_pred CeEEE--EEEcCCCCEEEEE-CCCCeEEEEeCCCCCcc
Confidence 3333 6899999876644 57888999999887543
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=8.2e-34 Score=252.38 Aligned_cols=271 Identities=15% Similarity=0.259 Sum_probs=220.3
Q ss_pred cceEEeeecCCccc--------cEEEEecC----CCceEEEecC------------------------C--c------cC
Q psy519 12 KHFIQNSFKPETVE--------DVLANLES----QKNLQSRYLP------------------------Y--Y------TS 47 (351)
Q Consensus 12 ~~v~~~~~sp~~~~--------~~l~~~~~----~~~i~i~~~~------------------------~--~------~~ 47 (351)
.+..++.|.|+..+ .++++|+. ...|.++++. . . ..
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 56688899997211 46777754 3456676543 0 0 45
Q ss_pred CCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCC----------CeeeEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCc
Q psy519 48 GHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQ----------MYPLRIFVGHKQDVTCARFHPKIT-YIGTGSYDKA 114 (351)
Q Consensus 48 ~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~----------~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~ 114 (351)
.|.+.|++++|+|+ +.+ ++++.+|.|++|++.+ .+....+.+|...+.+++|+|++. +|++++.||.
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHT 205 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence 78899999999997 555 8999999999999986 567788889999999999999988 9999999999
Q ss_pred EEEEeCCCCce-------eEEeccCCCCeEEEEEcc-CCCEEEEEecCCCCCeEEEEEccCC---ceeEEeccCCCCEEE
Q psy519 115 VRLWSITDGAS-------VRVFSDHVSPVLSIAFSP-CGKYLASGGTGSYDKAVRLWSITDG---ASVRVFSDHVSPVLS 183 (351)
Q Consensus 115 i~i~d~~~~~~-------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~ 183 (351)
|++||+..+.. ...+..|...|.+++|+| ++.+|++++. |+.|++||++++ +.+..+..|...|.+
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 282 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD---DQKLMIWDTRNNNTSKPSHTVDAHTAEVNC 282 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCSCSSSCSEEEECCSSCEEE
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC---CCeEEEEECCCCCCCcceeEeecCCCCeEE
Confidence 99999987432 456678999999999999 6788999988 999999999987 577778889999999
Q ss_pred EEECCCCc-EEEEEcCCCeEEEEEcCC-CcEEEEeeccCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCC-------
Q psy519 184 IAFSPCGK-YLASGGEDGLVLTHELTT-GRVISRFHLQEHEPVTSLVWSVTGE-TLVTGSLTGTVQFYGWPSA------- 253 (351)
Q Consensus 184 ~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~------- 253 (351)
++|+|++. ++++|+.||.|++||+++ ...+..+. .|...|.+++|+|+++ +|++++.||.|++||+...
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 99999887 788999999999999998 45566664 5678999999999985 7899999999999999872
Q ss_pred -------ceeee-----eecceeEEecCCc-eeeeeeccceeeEEE
Q psy519 254 -------SKIGI-----GVYPRCAAQPVGF-EAATLAANSRVRTLR 286 (351)
Q Consensus 254 -------~~~~~-----~~~~~~~~s~~~~-~~~~~~~~~~~~~~~ 286 (351)
+.+.. ..+..++|+|++. .+++++.++.++.|+
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 33322 4577899999999 677777776444443
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.7e-32 Score=238.03 Aligned_cols=301 Identities=12% Similarity=0.042 Sum_probs=232.2
Q ss_pred cceEEeeecCCccccEE-EEecCCCceEEEecCCc----cCCCccceEEEEECCCCcE--EEEeCCCcEEEEeCCCCeee
Q psy519 12 KHFIQNSFKPETVEDVL-ANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLA--LTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l-~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~--~~~~~d~~i~vw~~~~~~~~ 84 (351)
..+.+++|+|+ +++| ++++.++.|++||+.+. ...+...+.+++|+|++++ ++++.++.|++||+.+++.+
T Consensus 32 ~~~~~~~~s~d--g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 32 SNPMGAVISPD--GTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp SSEEEEEECTT--SSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcceEEECCC--CCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEE
Confidence 45899999999 9876 67778999999999876 2223348999999999986 45556799999999999988
Q ss_pred EEeeCCCCCeEEEEEeCCCCEE-EEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEE-EEecCCCCCeEEE
Q psy519 85 RIFVGHKQDVTCARFHPKITYI-GTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLA-SGGTGSYDKAVRL 162 (351)
Q Consensus 85 ~~~~~~~~~i~~i~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~d~~i~i 162 (351)
..+..+ ..+.+++|+|+++.+ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++++ ++.. ++.|++
T Consensus 110 ~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~---~~~v~~ 184 (391)
T 1l0q_A 110 GTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFD---SMSISV 184 (391)
T ss_dssp EEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETT---TTEEEE
T ss_pred EEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCC---CCEEEE
Confidence 877654 468999999999977 67888999999999999988888754 5679999999999885 5555 899999
Q ss_pred EEccCCceeEEeccCCCCEEEEEECCCCcEEEEEc---CCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEE-EE
Q psy519 163 WSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGG---EDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETL-VT 238 (351)
Q Consensus 163 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~ 238 (351)
||+++++....+. +...+.+++|+|+++++++++ .++.|++||+++++.+..+.. +..+.+++|+|++++| ++
T Consensus 185 ~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 185 IDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV--GPDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp EETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEE
T ss_pred EECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec--CCCccEEEEccCCCEEEEE
Confidence 9999998777775 456789999999999999887 689999999999988877753 4568999999999977 56
Q ss_pred EeCCCeEEEEeCCCCceeeeeecce--------eEEecCCcee-------------------eeeeccceeeEEEeeece
Q psy519 239 GSLTGTVQFYGWPSASKIGIGVYPR--------CAAQPVGFEA-------------------ATLAANSRVRTLREMHEI 291 (351)
Q Consensus 239 ~~~dg~i~i~~~~~~~~~~~~~~~~--------~~~s~~~~~~-------------------~~~~~~~~~~~~~~~~~~ 291 (351)
++.|+.|++||+.+++.+....... +.+.|++..+ ............++|+..
T Consensus 262 ~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 341 (391)
T 1l0q_A 262 LSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFG 341 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECS
T ss_pred cCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECC
Confidence 6889999999999988776532211 2223222111 111222234467788887
Q ss_pred eCceEEEeeEEEEecCCceeeccEEEecCCc
Q psy519 292 VGPVVVVESFIVEIRPDKWYEANLIVLDDDL 322 (351)
Q Consensus 292 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 322 (351)
.|...........|++++.|.......+.+-
T Consensus 342 ~g~~~~~~~~~~~~~~~g~y~~~~~~~~~~g 372 (391)
T 1l0q_A 342 DGSSSKKQNPTHTYSETGIYTVRLTVSNSNG 372 (391)
T ss_dssp SSCEECSSSCEECCSSCEEEEEEEEEEETTE
T ss_pred CCcccCcCCCeEEeCCCceEEEEEEEECCCC
Confidence 7775544444568999999987776554433
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=234.77 Aligned_cols=240 Identities=22% Similarity=0.321 Sum_probs=205.9
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM 81 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~ 81 (351)
++|...|.+++|+|+ +++|++|+.||.|++|++.+. ..+|...+.++.+. +.+ ++++.++.+++|+....
T Consensus 64 ~~~~~~V~~v~~~~~--~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 64 EQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp CSTTCCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS
T ss_pred cCCCCeEEEEEECCC--CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCC
Confidence 578889999999999 999999999999999999987 67888888877664 445 99999999999998865
Q ss_pred -eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCce----eEEeccCCCCeEEEEEccCCCEEEEEecCCC
Q psy519 82 -YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGAS----VRVFSDHVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 82 -~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
..+..+.+|...+..+.++++++++++++.|+.|++||+++++. ......+...|.+++++|++..++....++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 140 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 45667789999999999999999999999999999999988653 3445567889999999997765543333344
Q ss_pred CCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEc--CCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCC
Q psy519 157 DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGG--EDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGE 234 (351)
Q Consensus 157 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 234 (351)
++.|++||.+........ .+...+..+.|+|++..+++++ .|+.|++||+++++.+..+. .|...|.+++|+|+++
T Consensus 220 ~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~-gH~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGA 297 (318)
T ss_dssp TCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS
T ss_pred CCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCC
Confidence 899999999888766655 5667899999999998877654 79999999999999999886 5778999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCC
Q psy519 235 TLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 235 ~l~~~~~dg~i~i~~~~~~ 253 (351)
+|++|+.||+|++||+...
T Consensus 298 ~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 298 TVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEETTTEEEEECCSCC
T ss_pred EEEEEecCCeEEEEECCCC
Confidence 9999999999999998764
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=7.9e-33 Score=246.22 Aligned_cols=269 Identities=8% Similarity=-0.011 Sum_probs=225.9
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc----------cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCC
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQ 80 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~ 80 (351)
..+.+++|+|+ +.++++++.++.|++||+.+. ..+|...|.+++|++++.+ ++++.|+.|++||+++
T Consensus 123 ~~~~~~~~s~~--~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFIDN--TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESSS--SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeCC--CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 34568999998 999999999999999999876 3377889999999999988 8999999999999999
Q ss_pred CeeeEEeeCCCCCeEEEEEeCCCCEEEE-EeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCC----
Q psy519 81 MYPLRIFVGHKQDVTCARFHPKITYIGT-GSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGS---- 155 (351)
Q Consensus 81 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---- 155 (351)
++.+..+..|...+.+++|+|+++.+++ ++.++.|++||+++++.+..+.. ...+.+++|+|+++++++++...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccc
Confidence 9999899889999999999999998854 44799999999999988888765 45689999999999999887311
Q ss_pred -CCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEE-EEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCC
Q psy519 156 -YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYL-ASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTG 233 (351)
Q Consensus 156 -~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 233 (351)
.|+.|++||+++++.+..+ .+...+..++|+|+++.+ ++++.++.|++||+.+++....+. +...+.+++|+|++
T Consensus 280 ~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg 356 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP--VFDKPNTIALSPDG 356 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTS
T ss_pred cCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--CCCCCCeEEEcCCC
Confidence 1789999999988777665 445578999999999754 666889999999999988887764 56779999999999
Q ss_pred CEEEEEeC---------------CCeEEEEeCCCCceeee----eecceeEEecCCceeeeeec-cceeeEEEeee
Q psy519 234 ETLVTGSL---------------TGTVQFYGWPSASKIGI----GVYPRCAAQPVGFEAATLAA-NSRVRTLREMH 289 (351)
Q Consensus 234 ~~l~~~~~---------------dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~ 289 (351)
++|++++. ||.|++||+.+++.+.. ..+..++|+|+|..+++++. ++ .+++|+
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~---~i~v~~ 429 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDH---QIRVYR 429 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTT---EEEEEE
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCC---eEEEEE
Confidence 99988876 57999999999887765 34567899999999887765 65 455554
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-34 Score=252.08 Aligned_cols=271 Identities=13% Similarity=0.100 Sum_probs=218.3
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc---cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCee
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYP 83 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~ 83 (351)
.+|...|.+++|+|+ | .++.+.+|+.... ...|...|.+++|+|+|.+ ++++.||.|++||.+. .
T Consensus 49 ~gh~~~v~~V~FsPd--g-------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~ 117 (588)
T 2j04_A 49 NCNSKNLFHVKEFPL--E-------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--M 117 (588)
T ss_dssp SSBGGGTEEEEEECC--C-------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--E
T ss_pred cCCCccEEEEEECCC--C-------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--e
Confidence 689999999999999 7 6777888876644 3366889999999999987 9999999999999654 5
Q ss_pred eEEeeCCCC-----CeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCce-------eEEe----ccCCCCeEEEEEccCCCE
Q psy519 84 LRIFVGHKQ-----DVTCARFHPKITYIGTGSYDKAVRLWSITDGAS-------VRVF----SDHVSPVLSIAFSPCGKY 147 (351)
Q Consensus 84 ~~~~~~~~~-----~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~----~~~~~~i~~~~~~~~~~~ 147 (351)
+..+. |.. .+.+++|+|||++|++|+.||+|++||+.+++. +..+ .+|...|.+++|+|+|
T Consensus 118 l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-- 194 (588)
T 2j04_A 118 LTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-- 194 (588)
T ss_dssp EEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--
T ss_pred eeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--
Confidence 55666 655 599999999999999999999999999998753 5665 5677899999999999
Q ss_pred EEEEecCCCCCeEEEEEccCCce---eEEe-ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCC
Q psy519 148 LASGGTGSYDKAVRLWSITDGAS---VRVF-SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEP 223 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~~~---~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 223 (351)
+++++. |+.|++||+..++. ...+ ..|...|.+++|+ ++.+++++ ++.|++||+.+++... +...|...
T Consensus 195 Laass~---D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~-~~~gh~~~ 267 (588)
T 2j04_A 195 LVAALS---NNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISS-LKTGSLEN 267 (588)
T ss_dssp EEEEET---TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEE-EECSCCSC
T ss_pred EEEEeC---CCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEE-EEcCCCce
Confidence 777777 99999999988763 3456 4788899999999 68899887 6999999998776633 33367789
Q ss_pred EEEEEE--cCCCCEEEEEeCCCeEEEEeCCCCceeeeeecceeEEecCCceeeeeeccceeeEEEeeeceeC------ce
Q psy519 224 VTSLVW--SVTGETLVTGSLTGTVQFYGWPSASKIGIGVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVG------PV 295 (351)
Q Consensus 224 v~~~~~--~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g------~~ 295 (351)
+..++| +|++..|++++.||+ ++|... .+.++|++..++.. ++.+++|+...+ ..
T Consensus 268 V~~va~~~s~d~~~La~a~edG~-klw~~d-----------~~~~spd~~l~a~~-----d~~v~lW~~~g~~l~~~~~~ 330 (588)
T 2j04_A 268 FHIIPLNHEKESTILLMSNKTSY-KVLLED-----------ELHVTADNIIAPYL-----EKKFKKWSTIWNEFNNYETT 330 (588)
T ss_dssp CCEEEETTCSSCEEEEECSSCEE-EEEESS-----------SEEEECCCSSHHHH-----HHHHHHTTTTTTSSSSSCCE
T ss_pred EEEEEeeeCCCCCEEEEEcCCCC-EEEeec-----------cEEECCCceEEEEc-----CCEEEEEECCCCceeeeccc
Confidence 999999 999999999999999 999987 35689999877764 345555654211 13
Q ss_pred EEEeeEEEEecCCceeeccEEEe
Q psy519 296 VVVESFIVEIRPDKWYEANLIVL 318 (351)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~ 318 (351)
..+.+ +.|+|||...+..-..
T Consensus 331 ~~I~~--va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 331 LVIHG--ISLSPDGYSIAIVYDM 351 (588)
T ss_dssp EEEEE--EEECTTSSEEEEEEEE
T ss_pred eEEEE--EEECCCCCEEEEEEec
Confidence 44666 8899999766544443
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.1e-33 Score=252.09 Aligned_cols=235 Identities=22% Similarity=0.384 Sum_probs=205.4
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCC
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQ 80 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~ 80 (351)
...+|...|.+++| + +++|++|+.||.|++||+.+. +.+|...|.+++|++ +.+++++.|+.|++||+.+
T Consensus 168 ~~~~h~~~v~~l~~--~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--D--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp EECCCSSCEEEEEC--C--SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSS
T ss_pred EEcCCCCcEEEEEE--C--CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCC
Confidence 34689999999999 6 889999999999999999887 678999999999974 4569999999999999998
Q ss_pred Ceee---EEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC
Q psy519 81 MYPL---RIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 81 ~~~~---~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d 157 (351)
++.. ..+.+|...|.+++| +++++++++.||.|++||+++++.+..+.+|...|.++++ +++++++++. |
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~---d 315 (435)
T 1p22_A 243 PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSS---D 315 (435)
T ss_dssp SSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEET---T
T ss_pred CCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeC---C
Confidence 7655 667889999999999 6789999999999999999999999999999999999999 4789999998 9
Q ss_pred CeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCc---------EEEEeeccCCCCEEEEE
Q psy519 158 KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGR---------VISRFHLQEHEPVTSLV 228 (351)
Q Consensus 158 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~~v~~~~ 228 (351)
+.|++||+++++.+..+..|...|.+++| ++++|++|+.||.|++||++++. .+..+. .|...|.+++
T Consensus 316 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~ 392 (435)
T 1p22_A 316 NTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV-EHSGRVFRLQ 392 (435)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC-CCSSCCCCEE
T ss_pred CeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeecc-CCCCCeEEEE
Confidence 99999999999999999999999999999 78899999999999999997665 666664 5678899999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceee
Q psy519 229 WSVTGETLVTGSLTGTVQFYGWPSASKIG 257 (351)
Q Consensus 229 ~~~~~~~l~~~~~dg~i~i~~~~~~~~~~ 257 (351)
| ++.+|++++.||.|++||+.+.....
T Consensus 393 ~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 393 F--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp E--CSSCEEECCSSSEEEEEC--------
T ss_pred e--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 9 78889999999999999998765543
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.6e-34 Score=250.94 Aligned_cols=234 Identities=15% Similarity=0.113 Sum_probs=173.5
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc----------cCCCccceEEEEECC--------CCcE-EEEeCCC
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----------TSGHDMTVWSVEACS--------KGLA-LTGSRDT 71 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----------~~~~~~~i~~~~~~~--------~~~~-~~~~~d~ 71 (351)
........++|+ +.+|++++.|++|++|+.... +.+|.+.|++++|+| ++++ ++++.|+
T Consensus 89 ~~~~~~~~~~~~--~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 89 DGDGNVNSSPVY--SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp --------CCEE--EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred CCCcceeecCCC--CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 334444555666 788999999999999998765 678999999999997 6777 9999999
Q ss_pred cEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCceeEE----------------------
Q psy519 72 TARLWSLEQMYPLRIFVGHKQDVTCARFHPKIT-YIGTGSYDKAVRLWSITDGASVRV---------------------- 128 (351)
Q Consensus 72 ~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~---------------------- 128 (351)
+|+|||+.++.++..+..|...+.+++|+|++. +|++++.|++|++||+++++....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 999999998888888888999999999999874 799999999999999987754322
Q ss_pred ---eccCCCCeEEEEEc-cCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEE------------------EE
Q psy519 129 ---FSDHVSPVLSIAFS-PCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSI------------------AF 186 (351)
Q Consensus 129 ---~~~~~~~i~~~~~~-~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~------------------~~ 186 (351)
..+|...+.++.|+ |+++.+++++. |+.+++||++.++....+..|...+..+ .|
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~---d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCK---SGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACP 323 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECT---TSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEE
T ss_pred eeecccccccceeeeeecCCCCEEEEEeC---CCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEE
Confidence 13466788889986 79999999998 9999999998877665555444433333 33
Q ss_pred CC--CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy519 187 SP--CGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 187 ~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~ 251 (351)
+| ++.++++|+.||.|++||+.+++...... .+..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus 324 ~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~-~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 324 HPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI-QLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE-ECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred ccCCCCEEEEEECCCCEEEEEECCCCcEEEEec-CCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 33 44567788999999999999988777654 5678999999999999999998765 5566543
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-33 Score=247.13 Aligned_cols=234 Identities=7% Similarity=0.037 Sum_probs=200.5
Q ss_pred ccceEEEEECCCCcEEEEeCCCcEEEEeCCCCe---eeEEeeC-------------------------------------
Q psy519 50 DMTVWSVEACSKGLALTGSRDTTARLWSLEQMY---PLRIFVG------------------------------------- 89 (351)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~---~~~~~~~------------------------------------- 89 (351)
..++.+++|+++|++++++.++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred cccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 457889999999999777788999999999888 5555443
Q ss_pred -----------------CCCCeEEEEEeCCCCEE-EEEeCCCcEEEEeCC--CCceeEEec--cCCCCeEEEEEccCCCE
Q psy519 90 -----------------HKQDVTCARFHPKITYI-GTGSYDKAVRLWSIT--DGASVRVFS--DHVSPVLSIAFSPCGKY 147 (351)
Q Consensus 90 -----------------~~~~i~~i~~~~~~~~l-~~~~~dg~i~i~d~~--~~~~~~~~~--~~~~~i~~~~~~~~~~~ 147 (351)
|...|.+++|+|++++| ++++.||.|++||+. +++.+..+. .+...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 23369999999999996 899999999999999 888888775 56789999999999999
Q ss_pred EEEEecCCCCCeEEEEEccCCceeE----EeccCCCCEEEEEECCC---CcEEEEEcCCCeEEEEEcCCCcEEEEeeccC
Q psy519 148 LASGGTGSYDKAVRLWSITDGASVR----VFSDHVSPVLSIAFSPC---GKYLASGGEDGLVLTHELTTGRVISRFHLQE 220 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 220 (351)
|++++. ++.+++|++.+++... .+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+...|
T Consensus 164 l~~~~~---~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 164 VIIADK---FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp EEEEET---TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred EEEEeC---CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 999998 9999999998876543 67789999999999999 9999999999999999999998887765567
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee------------------------------cceeEEecCC
Q psy519 221 HEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGV------------------------------YPRCAAQPVG 270 (351)
Q Consensus 221 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~------------------------------~~~~~~s~~~ 270 (351)
...|.+++|+ ++++|++++.|+.|++||+.+++.+.... +..++|+|++
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 7899999999 99999999999999999999998765432 4468999999
Q ss_pred ceeeeee-ccceeeEEEeeec
Q psy519 271 FEAATLA-ANSRVRTLREMHE 290 (351)
Q Consensus 271 ~~~~~~~-~~~~~~~~~~~~~ 290 (351)
..+++++ .++. +++|+.
T Consensus 320 ~~l~~~~~~d~~---i~iw~~ 337 (450)
T 2vdu_B 320 PFVAFFVEATKC---IIILEM 337 (450)
T ss_dssp SEEEEEETTCSE---EEEEEE
T ss_pred CEEEEEECCCCe---EEEEEe
Confidence 9998888 5654 555555
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3e-33 Score=240.96 Aligned_cols=232 Identities=16% Similarity=0.126 Sum_probs=204.6
Q ss_pred CCCccceEEeeecCCcccc-EEEEecCCCceEEEec-CCc----cCC--CccceEEEEECCCCcE-EEEeCCCcEEEEeC
Q psy519 8 HGDHKHFIQNSFKPETVED-VLANLESQKNLQSRYL-PYY----TSG--HDMTVWSVEACSKGLA-LTGSRDTTARLWSL 78 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~-~~~----~~~--~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~ 78 (351)
.+|...|.+++|+|+ ++ +|++++.||.|++|++ ... ..+ |...|.+++|+| +.+ ++++.|+.|++||+
T Consensus 53 ~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~ 129 (342)
T 1yfq_A 53 LRYKHPLLCCNFIDN--TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDP 129 (342)
T ss_dssp EECSSCEEEEEEEES--SSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECH
T ss_pred eecCCceEEEEECCC--CCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcc
Confidence 368899999999999 99 9999999999999999 766 667 999999999999 666 99999999999999
Q ss_pred CC---------CeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCC-Cce--eEEeccCCCCeEEEEEcc-CC
Q psy519 79 EQ---------MYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITD-GAS--VRVFSDHVSPVLSIAFSP-CG 145 (351)
Q Consensus 79 ~~---------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~~~-~~ 145 (351)
.+ ++++..+. |...+.+++|+|++ +++++.|+.|++||+++ +.. ......+...+.+++|+| ++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 130 RNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ 206 (342)
T ss_dssp HHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG
T ss_pred cccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC
Confidence 87 77666665 88999999999886 88999999999999988 543 334456788999999999 99
Q ss_pred CEEEEEecCCCCCeEEEEEccCC------ceeEEeccCCC---------CEEEEEECCCCcEEEEEcCCCeEEEEEcCCC
Q psy519 146 KYLASGGTGSYDKAVRLWSITDG------ASVRVFSDHVS---------PVLSIAFSPCGKYLASGGEDGLVLTHELTTG 210 (351)
Q Consensus 146 ~~l~~~~~~~~d~~i~i~d~~~~------~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 210 (351)
+++++++. |+.|++||++.. +....+..|.. +|.+++|+|++++|++++.||.|++||+.++
T Consensus 207 ~~l~~~~~---dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 207 EGYACSSI---DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CEEEEEET---TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred CEEEEEec---CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 99999999 999999999887 77788877755 9999999999999999999999999999999
Q ss_pred cEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEeC
Q psy519 211 RVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGT-VQFYGW 250 (351)
Q Consensus 211 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~i~~~ 250 (351)
+.+..+...|...|.+++ |++++|++++.||. .+.|..
T Consensus 284 ~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 284 KKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred hHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 998887643378899999 99999999999998 555553
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=267.04 Aligned_cols=239 Identities=21% Similarity=0.257 Sum_probs=206.1
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC--CCeeeEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCcEEEEeC
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE--QMYPLRIFVGHKQDVTCARFHPK--ITYIGTGSYDKAVRLWSI 120 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~dg~i~i~d~ 120 (351)
+.+|.+.|++++|+|++.+ ++|+.||.|++||+. +++....+.+|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 4689999999999999977 999999999999998 55777888999999999999987 999999999999999999
Q ss_pred CCCc--eeEEeccCCCCeEEEEEccC--CCEEEEEecCCCCCeEEEEEccCC--ceeEEeccCCCCEEEEEECC------
Q psy519 121 TDGA--SVRVFSDHVSPVLSIAFSPC--GKYLASGGTGSYDKAVRLWSITDG--ASVRVFSDHVSPVLSIAFSP------ 188 (351)
Q Consensus 121 ~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~------ 188 (351)
.+++ ....+..|...|.+++|+|+ ++.+++++. |+.|++||++++ .....+..|...|.+++|+|
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~---dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC---CCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 9887 67777889999999999999 999999999 999999999887 34456678999999999999
Q ss_pred -------CCcEEEEEcCCCeEEEEEcCCCc----EEEEeeccCCCCEEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCc
Q psy519 189 -------CGKYLASGGEDGLVLTHELTTGR----VISRFHLQEHEPVTSLVWSVT---GETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 189 -------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~~~~~~~ 254 (351)
++.++++++.||.|++||++++. ....+. .|...|.+++|+|+ +++|++++.||.|++||+.+++
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 58999999999999999998773 333443 56789999999999 8999999999999999998864
Q ss_pred ee----------eeeecceeEEecCCceeeeeeccceeeEEEeeece
Q psy519 255 KI----------GIGVYPRCAAQPVGFEAATLAANSRVRTLREMHEI 291 (351)
Q Consensus 255 ~~----------~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
.. +...+..++|+|+|..+++++.++. +++|+..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~---I~vwd~~ 284 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK---VTLWKEN 284 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSC---EECCBCC
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCE---EEEEecC
Confidence 21 2256778999999999999988875 5566554
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=7e-34 Score=249.76 Aligned_cols=271 Identities=16% Similarity=0.092 Sum_probs=193.7
Q ss_pred cceEEeee---cCCccccEEEEecCCCceEEEecCCc--------------cCCCccceEEEEECC--------------
Q psy519 12 KHFIQNSF---KPETVEDVLANLESQKNLQSRYLPYY--------------TSGHDMTVWSVEACS-------------- 60 (351)
Q Consensus 12 ~~v~~~~~---sp~~~~~~l~~~~~~~~i~i~~~~~~--------------~~~~~~~i~~~~~~~-------------- 60 (351)
....++.| +|+ +..|++++.++.|.+|+.... ...+...+..+.|++
T Consensus 16 ~~p~~~~w~~~~~~--~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (393)
T 4gq1_A 16 VRPYTTTWCSQSPS--CSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGN 93 (393)
T ss_dssp CCEEEEEECTTSGG--GTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC-------
T ss_pred CCCeEEEEeCCCCC--CCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcc
Confidence 34455666 444 444555556788999976433 122334455555543
Q ss_pred ------CCcE-EEEeCCCcEEEEeCCCCeee-----EEeeCCCCCeEEEEEeC--------CCCEEEEEeCCCcEEEEeC
Q psy519 61 ------KGLA-LTGSRDTTARLWSLEQMYPL-----RIFVGHKQDVTCARFHP--------KITYIGTGSYDKAVRLWSI 120 (351)
Q Consensus 61 ------~~~~-~~~~~d~~i~vw~~~~~~~~-----~~~~~~~~~i~~i~~~~--------~~~~l~~~~~dg~i~i~d~ 120 (351)
++.+ ++++.|++|++||.++++.. ..+.+|...|.+++|+| |+++|++++.|++|++||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 3344 89999999999999887643 34578999999999998 7899999999999999999
Q ss_pred CCCceeEEeccCCCCeEEEEEccCCC-EEEEEecCCCCCeEEEEEccCCceeEEe-------------------------
Q psy519 121 TDGASVRVFSDHVSPVLSIAFSPCGK-YLASGGTGSYDKAVRLWSITDGASVRVF------------------------- 174 (351)
Q Consensus 121 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~d~~i~i~d~~~~~~~~~~------------------------- 174 (351)
+++..+..+..|..++.+++|+|++. +|++++. |+.|++||+++++.....
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~---d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 250 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER---NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS 250 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET---TSEEEEEETTCCC----------CSCCCSEEEESGGGC-----
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCC---CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec
Confidence 98888888888999999999999874 7899988 999999999887543221
Q ss_pred ccCCCCEEEEEEC-CCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCE------------------EEEEEcC--CC
Q psy519 175 SDHVSPVLSIAFS-PCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPV------------------TSLVWSV--TG 233 (351)
Q Consensus 175 ~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v------------------~~~~~~~--~~ 233 (351)
.+|...+.++.|+ |+++.+++++.|+.+++||+..++....+. .+...+ ....|+| ++
T Consensus 251 ~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (393)
T 4gq1_A 251 SGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEIS-DSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMD 329 (393)
T ss_dssp -CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTT
T ss_pred ccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEe-eecCccccEEEccccccccccCcceeEEEccCCCC
Confidence 2466778888886 799999999999999999998776554442 111111 2233444 34
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeEEEeee
Q psy519 234 ETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRTLREMH 289 (351)
Q Consensus 234 ~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
.++++|+.||.|++||+.+++.... ..+.+++|+|+|+.||+++.++ +..++++.
T Consensus 330 ~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 330 YFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp EEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 4677888999999999998876543 5678899999999999886554 55666654
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.9e-31 Score=231.52 Aligned_cols=260 Identities=12% Similarity=0.065 Sum_probs=214.2
Q ss_pred ccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE--EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEE
Q psy519 25 EDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA--LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCA 97 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~--~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i 97 (351)
+.++++++.++.|++||+... ...| ..+.+++|+|++.+ ++++.|+.|++||+.+++.+..+..+. .+.++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 457888999999999999877 3334 45899999999975 567789999999999999988887655 89999
Q ss_pred EEeCCCCEEEE-EeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEE-EEEecCCCCCeEEEEEccCCceeEEec
Q psy519 98 RFHPKITYIGT-GSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYL-ASGGTGSYDKAVRLWSITDGASVRVFS 175 (351)
Q Consensus 98 ~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~~~~d~~i~i~d~~~~~~~~~~~ 175 (351)
+|+|++++|++ ++.++.|++||+.+++.+..+.. ...+.+++|+|+++.+ ++++. ++.|++||+++++.+..+.
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNG---DKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCC---CCEEEEEECCCCcEEEEEe
Confidence 99999998755 45679999999999998887764 4578999999999987 56666 9999999999998888886
Q ss_pred cCCCCEEEEEECCCCcEE-EEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEe---CCCeEEEEeCC
Q psy519 176 DHVSPVLSIAFSPCGKYL-ASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGS---LTGTVQFYGWP 251 (351)
Q Consensus 176 ~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~i~~~~ 251 (351)
.+ ..+..++|+|+++++ ++++.++.|++||+++++....+. +...+.+++|+|++++|++++ .++.|++||+.
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 55 457999999999877 577889999999999998877664 456789999999999998887 68999999999
Q ss_pred CCceeeee----ecceeEEecCCceeeee-eccceeeEEEeeeceeCceE
Q psy519 252 SASKIGIG----VYPRCAAQPVGFEAATL-AANSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 252 ~~~~~~~~----~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 296 (351)
+++.+... .+..++|+|++..+++. ..++ .+++|+..+++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~---~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 233 TNKITARIPVGPDPAGIAVTPDGKKVYVALSFXN---TVSVIDTATNTIT 279 (391)
T ss_dssp TTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT---EEEEEETTTTEEE
T ss_pred CCeEEEEEecCCCccEEEEccCCCEEEEEcCCCC---EEEEEECCCCcEE
Confidence 98776553 33568999999987544 4444 6777887776644
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.8e-32 Score=242.70 Aligned_cols=310 Identities=11% Similarity=0.051 Sum_probs=240.7
Q ss_pred ccceEEee---ecCCccccEEEEe--------------cCCCceEEEecCC--c------cCCCccceEEEEECCCCcE-
Q psy519 11 HKHFIQNS---FKPETVEDVLANL--------------ESQKNLQSRYLPY--Y------TSGHDMTVWSVEACSKGLA- 64 (351)
Q Consensus 11 ~~~v~~~~---~sp~~~~~~l~~~--------------~~~~~i~i~~~~~--~------~~~~~~~i~~~~~~~~~~~- 64 (351)
...+..++ |+|+ ++.++.. ..++.+.+|.++. . .......+.+++|+|++.+
T Consensus 60 ~~g~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 60 NIALVEMAIPVYKDE--KEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLA 137 (433)
T ss_dssp TEEEEEEEEECCCTT--CCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEE
T ss_pred CCccEEEEEeeccCC--CcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEE
Confidence 45667778 8888 6655432 3334345555433 2 1122344668999997777
Q ss_pred EEEeCCCcEEEEeCCCCeeeE-----EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEE
Q psy519 65 LTGSRDTTARLWSLEQMYPLR-----IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSI 139 (351)
Q Consensus 65 ~~~~~d~~i~vw~~~~~~~~~-----~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~ 139 (351)
++++.++.|++||+.+++... .+.+|...+.+++|+|+++++++++.|+.|++||+++++.+..+..+...+.++
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~ 217 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKIL 217 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEE
T ss_pred EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEE
Confidence 777788899999999988776 345788899999999999999999999999999999999998888889999999
Q ss_pred EEccCCCEEEEEe-cCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEc--------CCCeEEEEEcCCC
Q psy519 140 AFSPCGKYLASGG-TGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGG--------EDGLVLTHELTTG 210 (351)
Q Consensus 140 ~~~~~~~~l~~~~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~ 210 (351)
+|+|+++.+++++ . ++.|++||+++++.+..+..+ ..+..++|+|+++++++++ .|+.|++||++++
T Consensus 218 ~~~~~~~~l~~~~~~---~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 218 LYDPIRDLVYCSNWI---SEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEETTTTEEEEEETT---TTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEcCCCCEEEEEecC---CCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 9999999886554 5 899999999999888877654 4589999999999999887 5889999999998
Q ss_pred cEEEEeeccCCCCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeee----eecceeEEecCCceeeeeeccce----
Q psy519 211 RVISRFHLQEHEPVTSLVWSVTGETL-VTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPVGFEAATLAANSR---- 281 (351)
Q Consensus 211 ~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~---- 281 (351)
+....+. +...+..++|+|+++.+ ++++.|+.|++||+.+++.... ..+..++|+|++..++++..+..
T Consensus 294 ~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 371 (433)
T 3bws_A 294 KLIDTIG--PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTE 371 (433)
T ss_dssp EEEEEEE--EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred cEEeecc--CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCcccc
Confidence 8777653 34578999999999755 5668899999999998877654 34567999999998888776543
Q ss_pred --------eeEEEeeeceeCceEEEee-----EEEEecCCceeeccEEEecCCcccccee
Q psy519 282 --------VRTLREMHEIVGPVVVVES-----FIVEIRPDKWYEANLIVLDDDLKECNLE 328 (351)
Q Consensus 282 --------~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 328 (351)
++.+++|+..+++...... ..+.|+|++.++...-..+..+..|++.
T Consensus 372 ~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 3478889887776543321 2368899998765442247778888764
No 121
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.9e-32 Score=236.97 Aligned_cols=197 Identities=13% Similarity=0.092 Sum_probs=167.4
Q ss_pred CCccceEEeeecCCccccEEEE--ecCCCceEEEecCCc----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCe
Q psy519 9 GDHKHFIQNSFKPETVEDVLAN--LESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMY 82 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~~~~l~~--~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~ 82 (351)
.+...+.+++|||| |++|++ ++.|+.|++||+.+. ...|...|.+++|+|+|++++.+.++.+++|+..+++
T Consensus 131 ~~~~~~~~v~fSpD--g~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 131 NADDYTKLVYISRE--GTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGS 208 (365)
T ss_dssp CTTCCEEEEEECTT--SSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCC
T ss_pred CcccCEEEEEEcCC--CCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCc
Confidence 34556889999999 999765 446899999999887 3457888999999999999544456677888877776
Q ss_pred eeE--EeeCCCCCeEEEEEeCCCCEEEEEeCCC----cEEEEeCCCCce----eEEeccCCCCeEEEEEccCCCEEEEEe
Q psy519 83 PLR--IFVGHKQDVTCARFHPKITYIGTGSYDK----AVRLWSITDGAS----VRVFSDHVSPVLSIAFSPCGKYLASGG 152 (351)
Q Consensus 83 ~~~--~~~~~~~~i~~i~~~~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~ 152 (351)
.+. ....|...+.+++|+|+++.+++++.|+ .+++|++..... ...+.+|...|++++|+|+|++|++|+
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc
Confidence 553 3456888999999999999999998887 688899876553 345677899999999999999999999
Q ss_pred cCCCCCeEEEEEccCCceeEEe-ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCC
Q psy519 153 TGSYDKAVRLWSITDGASVRVF-SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTG 210 (351)
Q Consensus 153 ~~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 210 (351)
. |+.|+|||+++++.+..+ .+|..+|++++|+|||++|++++.|++|+|||+...
T Consensus 289 ~---D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 289 N---DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp T---TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred C---CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9 999999999999998875 689999999999999999999999999999999643
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-32 Score=235.76 Aligned_cols=223 Identities=13% Similarity=0.066 Sum_probs=182.2
Q ss_pred ECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCC---------CCceeE
Q psy519 58 ACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSIT---------DGASVR 127 (351)
Q Consensus 58 ~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~---------~~~~~~ 127 (351)
+.+++.+ ++|+.||.|++||+++++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+.
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 3455655 999999999999999998887776 456778888887 9999999999999765 444344
Q ss_pred Eec-cCCCCeEEEEEcc--CCCEEEEEecCCCCCeEEEEEccCCceeEEec-cCCCCEEEEEECCCCcEEEEEcCCCeEE
Q psy519 128 VFS-DHVSPVLSIAFSP--CGKYLASGGTGSYDKAVRLWSITDGASVRVFS-DHVSPVLSIAFSPCGKYLASGGEDGLVL 203 (351)
Q Consensus 128 ~~~-~~~~~i~~~~~~~--~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 203 (351)
.+. .|..+|.+++|+| +++++++++. |+.|++||+++++...... .+...+.+++|+|++.+|++|+.||.|+
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~---dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADN---RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEET---TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeC---CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 443 5668899999999 9999999999 9999999999998876663 4556899999999999999999999999
Q ss_pred EEEcCCCcEE-EEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee--------eecc--eeEEecCCce
Q psy519 204 THELTTGRVI-SRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI--------GVYP--RCAAQPVGFE 272 (351)
Q Consensus 204 i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--------~~~~--~~~~s~~~~~ 272 (351)
+||+++++.+ ..+...|..+|.+++|+|++.+|++++ |+.|++||+++++.... ..+. .++|+|+|.+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 9999999877 667644778999999999999999999 55999999998866532 3333 4999999999
Q ss_pred eeeeec-cceeeEEEeeecee
Q psy519 273 AATLAA-NSRVRTLREMHEIV 292 (351)
Q Consensus 273 ~~~~~~-~~~~~~~~~~~~~~ 292 (351)
+++++. ++. +++|+...
T Consensus 275 l~~~s~~d~~---i~v~~~~~ 292 (343)
T 3lrv_A 275 MIAYSNESNS---LTIYKFDK 292 (343)
T ss_dssp EEEEETTTTE---EEEEEECT
T ss_pred EEEecCCCCc---EEEEEEcc
Confidence 999877 664 55555433
No 123
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-30 Score=225.00 Aligned_cols=270 Identities=15% Similarity=0.136 Sum_probs=213.6
Q ss_pred cCCCccceEEEEECCC---CcE-EEEeCCCcEEEEeCCC-Ceee-EEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEe
Q psy519 46 TSGHDMTVWSVEACSK---GLA-LTGSRDTTARLWSLEQ-MYPL-RIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWS 119 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~---~~~-~~~~~d~~i~vw~~~~-~~~~-~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d 119 (351)
+.+|.+.|++++|+|+ |.+ ++++.|+.|++||+++ ++.+ ..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 6789999999999999 466 9999999999999987 5544 67888999999999999999999999999999999
Q ss_pred CCCCceeEEeccCCCCeEEEEE--ccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEc
Q psy519 120 ITDGASVRVFSDHVSPVLSIAF--SPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGG 197 (351)
Q Consensus 120 ~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 197 (351)
+++++... +..|...|.+++| +|++++|++++. |+.|++||+++++.+..+..+. .+.++.+. ...+++++
T Consensus 115 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~ 187 (368)
T 3mmy_A 115 LSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSW---DKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVAT 187 (368)
T ss_dssp TTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEET---TSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEE
T ss_pred cCCCCcee-eccccCceEEEEEEeCCCCCEEEEccC---CCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEe
Confidence 99988766 4569999999999 899999999999 9999999999999888887664 56666665 45788888
Q ss_pred CCCeEEEEEcCCCcEEEEe-eccCCCCEEEEEEcCCCCE----EEEEeCCCeEEEEeCCCCce---eee-----e-----
Q psy519 198 EDGLVLTHELTTGRVISRF-HLQEHEPVTSLVWSVTGET----LVTGSLTGTVQFYGWPSASK---IGI-----G----- 259 (351)
Q Consensus 198 ~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~----l~~~~~dg~i~i~~~~~~~~---~~~-----~----- 259 (351)
.++.+.+|+++........ ..........+.+.++... +++++.||.|++|++..... ... .
T Consensus 188 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT 267 (368)
T ss_dssp GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----
T ss_pred CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccc
Confidence 8999999999876544333 2223356677777665544 99999999999999988632 111 1
Q ss_pred -------ecceeEEecCCceeeeeeccceeeEEEeeeceeCceEEEee------EEEEecCCceeeccEEEecCCccccc
Q psy519 260 -------VYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVVVES------FIVEIRPDKWYEANLIVLDDDLKECN 326 (351)
Q Consensus 260 -------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~ 326 (351)
.+..++|+|++..+++++.++. +++|+..++....... ..+.|+|++.++... ..++..+.++
T Consensus 268 ~~~~~~~~v~~~~~sp~~~~l~s~~~dg~---i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-s~d~~~~~~~ 343 (368)
T 3mmy_A 268 SAPQDIYAVNGIAFHPVHGTLATVGSDGR---FSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYA-SSYDWSKGHE 343 (368)
T ss_dssp CCCEEECCEEEEEECTTTCCEEEEETTSC---EEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEE-ECCCSTTCGG
T ss_pred cccccccceEEEEEecCCCEEEEEccCCe---EEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEE-eccccccccc
Confidence 5788999999999999998875 5666665554332211 127899999887655 3444444444
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.2e-31 Score=222.11 Aligned_cols=237 Identities=15% Similarity=0.119 Sum_probs=174.6
Q ss_pred CcCCCCccceEEeeecCCccc--------------cEEEEecCCCceEEEecCCccCCCccceEEEEECCCCcEEEEe--
Q psy519 5 HLNHGDHKHFIQNSFKPETVE--------------DVLANLESQKNLQSRYLPYYTSGHDMTVWSVEACSKGLALTGS-- 68 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~--------------~~l~~~~~~~~i~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 68 (351)
+.-++|..+|..++|.|+..+ ..|+.+..|..+.-+.+. .+|...|+.+ ++++++..+
T Consensus 80 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s---~g~~~~v~~l---~~g~lv~ss~~ 153 (356)
T 2w18_A 80 YTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK---SGNIKAVLGL---TKRRLVSSSGT 153 (356)
T ss_dssp EEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE---EEEEEEEEEE---TTTEEEEEESS
T ss_pred EEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe---CCCeEEEEec---CCCcEEEeccc
Confidence 345678888999999995211 122222222222222222 2344455554 567774443
Q ss_pred -CCCcEEEEeC-CCCeeeEEeeCCCCCeEEEEEeC---CCCEEEEEeCCCcEEEEeCCCCceeEEeccCC---CCeEEEE
Q psy519 69 -RDTTARLWSL-EQMYPLRIFVGHKQDVTCARFHP---KITYIGTGSYDKAVRLWSITDGASVRVFSDHV---SPVLSIA 140 (351)
Q Consensus 69 -~d~~i~vw~~-~~~~~~~~~~~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~i~~~~ 140 (351)
.|+.|++|++ .+++.+..+..|...++.++|+| ++.+|++++.|++|++||+.+++.++++.+|. ..+.+++
T Consensus 154 g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~va 233 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKA 233 (356)
T ss_dssp STTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEE
T ss_pred CCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEE
Confidence 4999999999 55888888888999999999999 77999999999999999999999999997643 4677889
Q ss_pred EccCCCEEEEEec---------CCCCCeEEEEEccCCceeEEe-----ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEE
Q psy519 141 FSPCGKYLASGGT---------GSYDKAVRLWSITDGASVRVF-----SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHE 206 (351)
Q Consensus 141 ~~~~~~~l~~~~~---------~~~d~~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 206 (351)
|+|+|.++++++. ++.|++|++||..+++.+..+ .+|...+.+..+ ++.++++++.|+.|+|||
T Consensus 234 fSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 234 YSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred ECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEE
Confidence 9999998754221 223999999999999877655 356555544444 378899999999999999
Q ss_pred cCCCcEEEEeeccCCCC-EEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy519 207 LTTGRVISRFHLQEHEP-VTSLVWSVTGETLVTGSLTGTVQFYGW 250 (351)
Q Consensus 207 ~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~i~~~ 250 (351)
+.+++.+.++. .|... +..++|+|||++|++|+.|++|+|||+
T Consensus 312 l~tGk~l~tL~-gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQCTALLP-PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSEEEEEC-CC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEec-CCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999886 34444 456899999999999999999999985
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=4e-30 Score=222.75 Aligned_cols=229 Identities=12% Similarity=0.111 Sum_probs=184.0
Q ss_pred ceEEeeecCCccccEE-EEecCCCceEEEecCCc----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCC-eeeEE
Q psy519 13 HFIQNSFKPETVEDVL-ANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQM-YPLRI 86 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l-~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~-~~~~~ 86 (351)
.+..++++++ ++.+ ++++.++.|++||..+. ...+...|.++.|+++...+ ..++.|++||+.++ +.+..
T Consensus 60 ~~~~~~~~~~--~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~--~~~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 60 HLSKVRMLHR--TNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVV--SYGDVISVFKFGNPWKRITD 135 (355)
T ss_dssp CCCEEEECTT--SSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEE--EETTEEEEEESSTTCCBSSC
T ss_pred CeEEEEEcCC--CCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEE--EEcCEEEEEECCCCceeeEE
Confidence 4677888888 7777 56777899999999877 33467799999998875433 34789999999988 66666
Q ss_pred eeCCCCCeEEEEEeCCCCEEEE--EeCCCcEEEEeCCCCc----------------eeEEeccCCCCeEEEEEccCCCEE
Q psy519 87 FVGHKQDVTCARFHPKITYIGT--GSYDKAVRLWSITDGA----------------SVRVFSDHVSPVLSIAFSPCGKYL 148 (351)
Q Consensus 87 ~~~~~~~i~~i~~~~~~~~l~~--~~~dg~i~i~d~~~~~----------------~~~~~~~~~~~i~~~~~~~~~~~l 148 (351)
+.. +...+++++ .++++ |+.+|.|++||+.+++ .+..+.+|...|.+++|+|++++|
T Consensus 136 ~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l 210 (355)
T 3vu4_A 136 DIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV 210 (355)
T ss_dssp CEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE
T ss_pred ecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE
Confidence 554 444566777 56665 5889999999999765 267888999999999999999999
Q ss_pred EEEecCCCCCe-EEEEEccCCceeEEec-c-CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEE----------
Q psy519 149 ASGGTGSYDKA-VRLWSITDGASVRVFS-D-HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISR---------- 215 (351)
Q Consensus 149 ~~~~~~~~d~~-i~i~d~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---------- 215 (351)
++++. |+. |++||+++++.+..+. + |...|.+++|+|++++|++++.|+.|++||++.+.....
T Consensus 211 ~s~s~---d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 3vu4_A 211 ATCSQ---DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMK 287 (355)
T ss_dssp EEEET---TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECC
T ss_pred EEEeC---CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecc
Confidence 99999 998 9999999999999997 4 999999999999999999999999999999976532110
Q ss_pred ----------eecc--CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy519 216 ----------FHLQ--EHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 216 ----------~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
+... ...+...++|+++++.|++++.||.+++|++..+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 288 YFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 1111 1123467999999999999999999999997653
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.2e-29 Score=224.21 Aligned_cols=277 Identities=12% Similarity=0.029 Sum_probs=212.8
Q ss_pred ccceEEeeecCCcccc-EEEEec----CCC----ceEEEec--CCc-------cCCCccceEEEEECC------------
Q psy519 11 HKHFIQNSFKPETVED-VLANLE----SQK----NLQSRYL--PYY-------TSGHDMTVWSVEACS------------ 60 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~-~l~~~~----~~~----~i~i~~~--~~~-------~~~~~~~i~~~~~~~------------ 60 (351)
...+...+|++. |. ++++|+ .+| .+++||+ .++ +.+|...+..+++.+
T Consensus 62 ~~~~~~~~w~~~--g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 62 AQEVQPAAWSAL--GIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGGCCHHHHHTT--TCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCHHHHHhc--CCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 357788899988 64 565765 467 8999999 654 445666666666553
Q ss_pred ---CCcEEEEeCC------CcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCC---cEEEEeCCCCceeEE
Q psy519 61 ---KGLALTGSRD------TTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDK---AVRLWSITDGASVRV 128 (351)
Q Consensus 61 ---~~~~~~~~~d------~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~ 128 (351)
..+++.++.+ +.|++||+.. .....+..|...+.+++|+|+|+.|++++.++ .|++||+.+++.. .
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~ 217 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-Q 217 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-E
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-E
Confidence 4455555443 7999999975 45667778899999999999999999999875 9999999988765 4
Q ss_pred eccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcC-CC--eEEEE
Q psy519 129 FSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGE-DG--LVLTH 205 (351)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~i~ 205 (351)
+..+...+.+++|+|+|+.|+.......+..|++||+++++. ..+..|...+..++|+|||++|++++. ++ .|++|
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 556778999999999999888443222234599999988765 567778889999999999999888876 44 68888
Q ss_pred EcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeee---eecceeEEecCCceeeeeecc
Q psy519 206 ELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLT---GTVQFYGWPSASKIGI---GVYPRCAAQPVGFEAATLAAN 279 (351)
Q Consensus 206 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~i~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~ 279 (351)
|+.+++.. .+. .+...+..++|+|+|++|++++.+ ..|++||+.+++.... ..+..++|+|+|..++++..+
T Consensus 297 d~~~~~~~-~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 297 NINGGAPQ-RIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp ETTSSCCE-ECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEE
T ss_pred ECCCCCEE-EEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcC
Confidence 99877643 332 344678899999999999888764 5899999998876543 245678999999999998887
Q ss_pred ceeeEEEeeeceeCc
Q psy519 280 SRVRTLREMHEIVGP 294 (351)
Q Consensus 280 ~~~~~~~~~~~~~g~ 294 (351)
+....+.+|+...+.
T Consensus 375 ~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 375 GMGSVLNLVSTDGRF 389 (415)
T ss_dssp TTEEEEEEEETTSCC
T ss_pred CCccEEEEEECCCCc
Confidence 766678888865443
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=7.8e-28 Score=218.94 Aligned_cols=311 Identities=10% Similarity=-0.024 Sum_probs=236.5
Q ss_pred eecCCccccEEEEecCCCceEEEecCCc-----cC-CCccceEEEEECCCCcE-EEEeCCCcEEEEeC--CCCeeeEEee
Q psy519 18 SFKPETVEDVLANLESQKNLQSRYLPYY-----TS-GHDMTVWSVEACSKGLA-LTGSRDTTARLWSL--EQMYPLRIFV 88 (351)
Q Consensus 18 ~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~-~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~--~~~~~~~~~~ 88 (351)
+|+|+ +.++++++.+++|.+||..+. +. ++. +..++|+|+|++ ++++.|+.|++||+ .+++.+..+.
T Consensus 144 ~~~p~--~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLP--NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGG--GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCC--CEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 48899 999999999999999999876 22 333 889999999988 88999999999999 8888888887
Q ss_pred CCCCCeEEEEEeC----CCCEEEEEeC-CCcEEEEeCCCCceeEEeccC-----------CCCeEEEEEccCCCEEEEEe
Q psy519 89 GHKQDVTCARFHP----KITYIGTGSY-DKAVRLWSITDGASVRVFSDH-----------VSPVLSIAFSPCGKYLASGG 152 (351)
Q Consensus 89 ~~~~~i~~i~~~~----~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l~~~~ 152 (351)
. ...+..++|+| +|+++++++. +++|.+||..+++++..+..+ ...+.++.++|++..+++..
T Consensus 220 ~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 I-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp C-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred c-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 4 45679999999 9999998885 899999999999988877542 23788999999877665544
Q ss_pred cCCCCCeEEEEEccCCceeE--EeccCCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcCCCcEEEEeecc---CCCCEEE
Q psy519 153 TGSYDKAVRLWSITDGASVR--VFSDHVSPVLSIAFSPCGKYLASG-GEDGLVLTHELTTGRVISRFHLQ---EHEPVTS 226 (351)
Q Consensus 153 ~~~~d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~ 226 (351)
.. ++.|.+||+.+.+.+. .+ .+...+..+.|+|+|++++++ ..++.|.+||+.+++.+..+... |......
T Consensus 299 ~~--~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 299 KE--TGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp TT--TTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE
T ss_pred CC--CCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc
Confidence 32 8999999998866544 34 345667889999999977655 45889999999999988877642 3222333
Q ss_pred EEEcCC-CCEEEEEe-CCCeEEEEeCCC-------Cceeeeeec-----ceeEEecCCceeeeeeccc----eeeEEEee
Q psy519 227 LVWSVT-GETLVTGS-LTGTVQFYGWPS-------ASKIGIGVY-----PRCAAQPVGFEAATLAANS----RVRTLREM 288 (351)
Q Consensus 227 ~~~~~~-~~~l~~~~-~dg~i~i~~~~~-------~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~----~~~~~~~~ 288 (351)
+ ++|+ +.+++++. .|++|.+||+.+ .+.++.... ..++++|+++.+.+....+ ....+.+|
T Consensus 376 ~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~ 454 (543)
T 1nir_A 376 F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 454 (543)
T ss_dssp E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEE
T ss_pred c-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEE
Confidence 3 4676 66667765 589999999988 666665433 4589999999998876322 24578888
Q ss_pred eceeCceE-EE--------------eeEEEEecCCceeeccEEE----ecCCccccceeeeeeeeecC
Q psy519 289 HEIVGPVV-VV--------------ESFIVEIRPDKWYEANLIV----LDDDLKECNLETYSQMIPVP 337 (351)
Q Consensus 289 ~~~~g~~~-~~--------------~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~ 337 (351)
+..+++.. .. .....+|+|++.++....- .++.|.+||.++......++
T Consensus 455 d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 455 DLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp ETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred ECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 87766543 21 1123689999998764422 25889999999887655444
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=1e-27 Score=218.24 Aligned_cols=291 Identities=11% Similarity=0.048 Sum_probs=223.9
Q ss_pred eEEeeecCCccccEEEEecCCCceEEEec--CCc----cCCCccceEEEEECC----CCcE-EEEe-CCCcEEEEeCCCC
Q psy519 14 FIQNSFKPETVEDVLANLESQKNLQSRYL--PYY----TSGHDMTVWSVEACS----KGLA-LTGS-RDTTARLWSLEQM 81 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~~~~~~i~i~~~--~~~----~~~~~~~i~~~~~~~----~~~~-~~~~-~d~~i~vw~~~~~ 81 (351)
+..++|+|+ |++|++++.++.|.+||+ .+. ...+...+..++|+| +|++ ++++ .+++|.+||..++
T Consensus 181 ~~~v~~spd--g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 181 VHISRMSAS--GRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp EEEEEECTT--SCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred cceEEECCC--CCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 789999999 999999999999999999 554 122445678999999 9987 5555 5899999999999
Q ss_pred eeeEEeeCC-----------CCCeEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCceeE--EeccCCCCeEEEEEccCCCE
Q psy519 82 YPLRIFVGH-----------KQDVTCARFHPKIT-YIGTGSYDKAVRLWSITDGASVR--VFSDHVSPVLSIAFSPCGKY 147 (351)
Q Consensus 82 ~~~~~~~~~-----------~~~i~~i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~ 147 (351)
+++..+..+ ...+..+.++|++. ++++...++.|.+||+.+.+.+. .+. +...+.+++|+|+|++
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRY 337 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCE
Confidence 988877642 23688999999765 45666778999999998876544 333 5567888999999998
Q ss_pred EEEEecCCCCCeEEEEEccCCceeEEecc----CCCCEEEEEECCC-CcEEEEEc-CCCeEEEEEcCC-------CcEEE
Q psy519 148 LASGGTGSYDKAVRLWSITDGASVRVFSD----HVSPVLSIAFSPC-GKYLASGG-EDGLVLTHELTT-------GRVIS 214 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~-~~~l~~~~-~dg~i~i~d~~~-------~~~~~ 214 (351)
+++++.. ++.|.+||+.+++.+..+.. |.+....+ ++|+ +..++++. .|+.|.+||+.+ .+.++
T Consensus 338 l~va~~~--~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~ 414 (543)
T 1nir_A 338 FMTAANN--SNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA 414 (543)
T ss_dssp EEEEEGG--GTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred EEEEecC--CCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEE
Confidence 8766532 78999999999998887764 54433333 4676 56666665 579999999988 78888
Q ss_pred EeeccCCCCEEEEEEcCCCCEEEEEe-------CCCeEEEEeCCCCcee-ee-------------eecceeEEecCCcee
Q psy519 215 RFHLQEHEPVTSLVWSVTGETLVTGS-------LTGTVQFYGWPSASKI-GI-------------GVYPRCAAQPVGFEA 273 (351)
Q Consensus 215 ~~~~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~i~~~~~~~~~-~~-------------~~~~~~~~s~~~~~~ 273 (351)
++. .+...+..+.++|++++|++++ .+++|.+||+.+++.. .. ..+.++.|+|+|..+
T Consensus 415 ~l~-~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~ 493 (543)
T 1nir_A 415 ELQ-GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEV 493 (543)
T ss_dssp EEE-CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEE
T ss_pred EEE-cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEE
Confidence 886 3446678899999999999987 2679999999988765 22 345678999999998
Q ss_pred eeeecc--ceeeEEEeeeceeCceEEEeeEEEEecCCcee
Q psy519 274 ATLAAN--SRVRTLREMHEIVGPVVVVESFIVEIRPDKWY 311 (351)
Q Consensus 274 ~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 311 (351)
.+.... .....+.+||..+++...........+|+|.+
T Consensus 494 ~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~~p~g~~ 533 (543)
T 1nir_A 494 WFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKF 533 (543)
T ss_dssp EEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCSEEEEE
T ss_pred EEEeecCCCCCCeEEEEECCCceEEEeecCCCccCCCeee
Confidence 877543 24578889999999866444322245566655
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=6.2e-28 Score=228.96 Aligned_cols=296 Identities=11% Similarity=0.041 Sum_probs=217.7
Q ss_pred ccceEEeeecCCccccEEEEecC-CC-----ceEEEecCCc-----cCCCc------------------------cceEE
Q psy519 11 HKHFIQNSFKPETVEDVLANLES-QK-----NLQSRYLPYY-----TSGHD------------------------MTVWS 55 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~-~~-----~i~i~~~~~~-----~~~~~------------------------~~i~~ 55 (351)
...+.+++|||| |++|++++. ++ .|++|++.++ ...+. ..+.+
T Consensus 36 ~~~~~~~~~Spd--G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPD--GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTT--SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecC--CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 467899999999 999999988 87 8999999876 22222 33789
Q ss_pred EEECCCCcE-EEEeCCCcEEEEeCCCCe--eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccC
Q psy519 56 VEACSKGLA-LTGSRDTTARLWSLEQMY--PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDH 132 (351)
Q Consensus 56 ~~~~~~~~~-~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 132 (351)
++|+|||++ ++++. +.|++||+.+++ ....+..|...+..++|+|||++|++++ ++.|++||+.+++.......+
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 999999988 55554 999999999873 3445667888899999999999999887 568999999988766554433
Q ss_pred CCC----------------eEEEEEccCCCEEEEEecCCCCC---------------------------------eEEEE
Q psy519 133 VSP----------------VLSIAFSPCGKYLASGGTGSYDK---------------------------------AVRLW 163 (351)
Q Consensus 133 ~~~----------------i~~~~~~~~~~~l~~~~~~~~d~---------------------------------~i~i~ 163 (351)
... +.+++|+|||++|++++. |+ .|.+|
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~---d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI---DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE---ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEE---cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 332 477999999999998876 54 78999
Q ss_pred EccC-CceeEEec--cCCCCEEEEEECCCCcEEEEEcC-----CCeEEEEEcCCCcEEEEeeccCCC---CEEEEEEcCC
Q psy519 164 SITD-GASVRVFS--DHVSPVLSIAFSPCGKYLASGGE-----DGLVLTHELTTGRVISRFHLQEHE---PVTSLVWSVT 232 (351)
Q Consensus 164 d~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~ 232 (351)
|+.+ ++...... .+...+..++| |||++|++++. +..|++||+.+++....+...... .+..++|+||
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 9988 77554433 36678899999 99999987653 567999999998877665433222 4568999999
Q ss_pred CCEEEEEeCCCeEEEEeCC-CCceeee-----eeccee-EEecCCceeeeeeccceeeEEEeeecee-Cc-eEEEe----
Q psy519 233 GETLVTGSLTGTVQFYGWP-SASKIGI-----GVYPRC-AAQPVGFEAATLAANSRVRTLREMHEIV-GP-VVVVE---- 299 (351)
Q Consensus 233 ~~~l~~~~~dg~i~i~~~~-~~~~~~~-----~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~---- 299 (351)
|+++++++.||.+++|.+. .++ ... ..+..+ .|+|++..+++.+.......+++|.... |. ...+.
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~ 426 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPG 426 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCS
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCC
Confidence 9998999999977777665 233 222 223344 5999999887766655433555665542 22 11111
Q ss_pred eEEEEecCCceeeccE
Q psy519 300 SFIVEIRPDKWYEANL 315 (351)
Q Consensus 300 ~~~~~~~~~~~~~~~~ 315 (351)
.....|+||+.+....
T Consensus 427 ~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 427 MHSASFARNASVYVDS 442 (741)
T ss_dssp EEEEEECTTSSEEEEE
T ss_pred ceEEEECCCCCEEEEE
Confidence 1236899999876544
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4e-27 Score=208.03 Aligned_cols=241 Identities=15% Similarity=0.080 Sum_probs=188.8
Q ss_pred ccEEEEecCC------CceEEEecCCc----cCCCccceEEEEECCCCcE-EEEeCCC---cEEEEeCCCCeeeEEeeCC
Q psy519 25 EDVLANLESQ------KNLQSRYLPYY----TSGHDMTVWSVEACSKGLA-LTGSRDT---TARLWSLEQMYPLRIFVGH 90 (351)
Q Consensus 25 ~~~l~~~~~~------~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~-~~~~~d~---~i~vw~~~~~~~~~~~~~~ 90 (351)
+..+++++.+ +.|++||+... +.+|...+.+++|+|+|+. ++++.++ .|++||+.+++.. .+..|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 4456655543 79999999865 5678899999999999987 7787775 9999999998765 56678
Q ss_pred CCCeEEEEEeCCCCEEE-EEeCCCc--EEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC
Q psy519 91 KQDVTCARFHPKITYIG-TGSYDKA--VRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD 167 (351)
Q Consensus 91 ~~~i~~i~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~ 167 (351)
...+.+++|+|||+.|+ +++.++. |++||+.+++. ..+..+...+.+++|+|+|++|++++.......|++||+.+
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 88999999999999887 6666554 99999988775 56667888999999999999998877511122788889887
Q ss_pred CceeEEeccCCCCEEEEEECCCCcEEEEEcCC---CeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCC-
Q psy519 168 GASVRVFSDHVSPVLSIAFSPCGKYLASGGED---GLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTG- 243 (351)
Q Consensus 168 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg- 243 (351)
++. ..+..+...+..++|+|+|++|++++.+ ..|++||+.+++.. .+. .+ ..+.+++|+|+|++|++++.++
T Consensus 301 ~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~-~~-~~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 301 GAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLS-ST-FLDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp SCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECC-CS-SSCEEEEECTTSSEEEEEEEETT
T ss_pred CCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-Eec-CC-CCcCCeEEcCCCCEEEEEEcCCC
Confidence 764 4455667788999999999999988764 58999999988764 332 22 4899999999999999988876
Q ss_pred --eEEEEeCCCCceeee----eecceeEEecCCc
Q psy519 244 --TVQFYGWPSASKIGI----GVYPRCAAQPVGF 271 (351)
Q Consensus 244 --~i~i~~~~~~~~~~~----~~~~~~~~s~~~~ 271 (351)
.|++||+..+..... ..+..++|+|-..
T Consensus 377 ~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 377 GSVLNLVSTDGRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEEEETTSCCEEECCCSSSEEEEEEECCCCC
T ss_pred ccEEEEEECCCCcEEEeeCCCCCCcCCccccccc
Confidence 899999986554332 4566778887543
No 131
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.7e-27 Score=197.52 Aligned_cols=171 Identities=9% Similarity=0.014 Sum_probs=134.5
Q ss_pred CCCcEEEEeC-CCCceeEEeccCCCCeEEEEEcc---CCCEEEEEecCCCCCeEEEEEccCCceeEEeccCC---CCEEE
Q psy519 111 YDKAVRLWSI-TDGASVRVFSDHVSPVLSIAFSP---CGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHV---SPVLS 183 (351)
Q Consensus 111 ~dg~i~i~d~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~i~~ 183 (351)
.|+.|++|++ .+++.+..+..|...++.++|+| ++..|++++. |++|+|||+++++.++.+..|. ..+.+
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~---D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~ 231 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTI---MNNIVIWNLKTGQLLKKMHIDDSYQASVCH 231 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEET---TSEEEEEETTTCCEEEEEECCC---CCCEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecC---CCcEEEEECCCCcEEEEEcCCCcceeeeEE
Confidence 3888999998 45777777778888888889998 7799999999 9999999999999999997654 35777
Q ss_pred EEECCCCcEE------------EEEcCCCeEEEEEcCCCcEEEEeec----cCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy519 184 IAFSPCGKYL------------ASGGEDGLVLTHELTTGRVISRFHL----QEHEPVTSLVWSVTGETLVTGSLTGTVQF 247 (351)
Q Consensus 184 ~~~~~~~~~l------------~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 247 (351)
++|+|+|+++ ++|+.|+.|++||..+++.+..+.. .+...+.+..+ ++.++++++.|++|+|
T Consensus 232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkI 309 (356)
T 2w18_A 232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAI 309 (356)
T ss_dssp EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEE
T ss_pred EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEE
Confidence 8999999886 5677899999999999988765531 22333444444 4889999999999999
Q ss_pred EeCCCCceeeee-----ecc-eeEEecCCceeeeeeccceeeEEEeee
Q psy519 248 YGWPSASKIGIG-----VYP-RCAAQPVGFEAATLAANSRVRTLREMH 289 (351)
Q Consensus 248 ~~~~~~~~~~~~-----~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
||+.+++.++.. .+. .++|||+|+.+++++.|+ ++++|+
T Consensus 310 WDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~---TIklWd 354 (356)
T 2w18_A 310 WDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG---NIFVYH 354 (356)
T ss_dssp EETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS---CEEEEE
T ss_pred EECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC---cEEEec
Confidence 999999987663 233 479999999999998877 455655
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=1.6e-26 Score=199.71 Aligned_cols=261 Identities=8% Similarity=-0.012 Sum_probs=209.8
Q ss_pred cceEEeeecCCccccEEEEecC-------CCceEEEecCCc----cCCCccceEEEEECCCCcE--EEEeCCCcEEEEeC
Q psy519 12 KHFIQNSFKPETVEDVLANLES-------QKNLQSRYLPYY----TSGHDMTVWSVEACSKGLA--LTGSRDTTARLWSL 78 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~-------~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~--~~~~~d~~i~vw~~ 78 (351)
..+..++|+|+ ++++++++. ++.|.+||..+. .......+..++|+|+|+. ++...++.|.+||+
T Consensus 41 ~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 41 KGAYEMAYSQQ--ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SSEEEEEEETT--TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCccceEECCC--CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 45778999999 998887763 568999999876 1122345678999999974 56666899999999
Q ss_pred CCCeeeEEeeCCCCC---------eEEEEEeCCCCEEEEEe--CCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCE
Q psy519 79 EQMYPLRIFVGHKQD---------VTCARFHPKITYIGTGS--YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKY 147 (351)
Q Consensus 79 ~~~~~~~~~~~~~~~---------i~~i~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 147 (351)
++++.+..+..+... +.+++|+|+++.+++++ .++.|.+||+.+++....+..+...+.+++|+|++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 999988877654322 68899999999887776 4788999999999988888755666889999999999
Q ss_pred EEEEecCCCCCeEEEEEccCCceeEEecc----CCCCEEEEEECCCCcEEEEEcC-CCeEEEEEcCCCcEEEEeeccCCC
Q psy519 148 LASGGTGSYDKAVRLWSITDGASVRVFSD----HVSPVLSIAFSPCGKYLASGGE-DGLVLTHELTTGRVISRFHLQEHE 222 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~ 222 (351)
++++.. ++.|.+||+.+++....+.. +...+..++|+|+++++++++. ++.|.+||+.+++.+..+....
T Consensus 199 l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 273 (353)
T 3vgz_A 199 LYTTNA---DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-- 273 (353)
T ss_dssp EEEECT---TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred EEEEcC---CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--
Confidence 999887 99999999999988877654 4556888999999997776655 5899999999999888776433
Q ss_pred CEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeeee----ecceeEEecCCceeeeeeccc
Q psy519 223 PVTSLVWSVTGETLVTGS-LTGTVQFYGWPSASKIGIG----VYPRCAAQPVGFEAATLAANS 280 (351)
Q Consensus 223 ~v~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~~~ 280 (351)
...++|+|+++++++++ .++.|.+||..+++.+... ....++|+|+|+.+.+....+
T Consensus 274 -~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 274 -SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp -CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred -CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 25799999999766655 6899999999998877653 345789999999877766654
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=1e-27 Score=226.82 Aligned_cols=297 Identities=12% Similarity=0.043 Sum_probs=209.8
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCcc---ceEEEEECCCCcE-EEEeCC---------CcE
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDM---TVWSVEACSKGLA-LTGSRD---------TTA 73 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~---~i~~~~~~~~~~~-~~~~~d---------~~i 73 (351)
..+.+++|+|+ |+++++ +.||.|++|++.++ ...|.. .|.+++|+|||++ ++++.+ +.+
T Consensus 17 ~~~~~~~~spd--g~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISD--TEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSS--SCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCC--CcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 44688999999 997766 68999999999876 334443 4899999999987 666653 788
Q ss_pred EEEeCCCCeeeEEee---CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCe--------------
Q psy519 74 RLWSLEQMYPLRIFV---GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPV-------------- 136 (351)
Q Consensus 74 ~vw~~~~~~~~~~~~---~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-------------- 136 (351)
++||+.+++. ..+. .|...+..++|+|||+.|++++. +.|++||+.+++.......+...+
T Consensus 94 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 94 VLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 9999998875 3332 34445888999999999999885 899999999888776655443333
Q ss_pred ----EEEEEccCCCEEEEEecCC-------------------------------CCCeEEEEEccCCceeEEeccC----
Q psy519 137 ----LSIAFSPCGKYLASGGTGS-------------------------------YDKAVRLWSITDGASVRVFSDH---- 177 (351)
Q Consensus 137 ----~~~~~~~~~~~l~~~~~~~-------------------------------~d~~i~i~d~~~~~~~~~~~~~---- 177 (351)
.+++|+|||+.|++++... .+..|++||+.+++....+..+
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 7899999999999887510 0127999999988765666543
Q ss_pred --CCCEEEEEECCCCcEEEEEcC----CCeEEEEEcCCCcEEEEeeccCCCCE----EEEEEcCCCCEEEE--EeCCC--
Q psy519 178 --VSPVLSIAFSPCGKYLASGGE----DGLVLTHELTTGRVISRFHLQEHEPV----TSLVWSVTGETLVT--GSLTG-- 243 (351)
Q Consensus 178 --~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~--~~~dg-- 243 (351)
...+..++|+|||+++++.+. +..|++||+.+++....+...+...+ ..++|+|||+.|+. +..++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 567889999999998876643 35799999999887665543333333 37899999997765 44566
Q ss_pred ----eEEEEe-CCCCc---eeee----eecce-eEEecCCceeeeeeccceeeEEEeeeceeC---ceEEEe--------
Q psy519 244 ----TVQFYG-WPSAS---KIGI----GVYPR-CAAQPVGFEAATLAANSRVRTLREMHEIVG---PVVVVE-------- 299 (351)
Q Consensus 244 ----~i~i~~-~~~~~---~~~~----~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~-------- 299 (351)
.|.+|| ..+++ .... ..+.. ++|+|+|+.+++.+.++....+++|....+ ....+.
T Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 411 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCT 411 (723)
T ss_dssp SCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCC
T ss_pred cceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCC
Confidence 577787 44444 2221 11222 689999999987776642234555554321 111111
Q ss_pred eEEEEecCCceeec
Q psy519 300 SFIVEIRPDKWYEA 313 (351)
Q Consensus 300 ~~~~~~~~~~~~~~ 313 (351)
-....|+|++.+..
T Consensus 412 ~~~~~~spdg~~l~ 425 (723)
T 1xfd_A 412 YFSASFSHSMDFFL 425 (723)
T ss_dssp CCEEEECTTSSEEE
T ss_pred eEEEEECCCCCEEE
Confidence 12368999987654
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=1.6e-25 Score=191.89 Aligned_cols=268 Identities=13% Similarity=0.020 Sum_probs=196.3
Q ss_pred eecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE--EEEeCCCcEEEEeCCCCee-eEEeeC
Q psy519 18 SFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA--LTGSRDTTARLWSLEQMYP-LRIFVG 89 (351)
Q Consensus 18 ~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~--~~~~~d~~i~vw~~~~~~~-~~~~~~ 89 (351)
.|.++ .+..+++...++.|.+||..+. ...+...+ .++|+|+|++ +++..++.|.+||+.+++. ...+..
T Consensus 4 ~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTT-SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CC-CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCC-CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 45555 1444677788999999999876 33344555 9999999975 4445589999999999887 667766
Q ss_pred CCCCeEEEEEeCCCCEEEEEeCCC---cEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCe-EEEEEc
Q psy519 90 HKQDVTCARFHPKITYIGTGSYDK---AVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKA-VRLWSI 165 (351)
Q Consensus 90 ~~~~i~~i~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~-i~i~d~ 165 (351)
+..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. .....+++|+|+|++++++... ++. |.+|++
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~--~~~~i~~~~~ 158 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRS--SANTVRRFKI 158 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEET--TTTEEEEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecC--CCceEEEEEE
Confidence 666665599999999999655553 899999999988887764 4556899999999877666441 577 999998
Q ss_pred cCCcee----EEeccCCCCEEEEEECCCCcEEEE-EcCCCeEEEEEcCCCcE---EEEeeccCCCCEEEEEEcCCCCEEE
Q psy519 166 TDGASV----RVFSDHVSPVLSIAFSPCGKYLAS-GGEDGLVLTHELTTGRV---ISRFHLQEHEPVTSLVWSVTGETLV 237 (351)
Q Consensus 166 ~~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~ 237 (351)
.....+ .........+..++|+|+|+++++ +..++.|.+||+.+++. +..+. ....+..++|+|+|++|+
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEE
Confidence 764332 111233456889999999996655 45689999999998887 66654 346778999999999776
Q ss_pred EEe-CCCeEEEEeCCCCceeeee-----------e---cceeEEecCCceeeeeeccceeeEEEeeeceeCc
Q psy519 238 TGS-LTGTVQFYGWPSASKIGIG-----------V---YPRCAAQPVGFEAATLAANSRVRTLREMHEIVGP 294 (351)
Q Consensus 238 ~~~-~dg~i~i~~~~~~~~~~~~-----------~---~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~ 294 (351)
+++ .++.|.+||+.+++..... . ...++|+|+|+.+++...++ ..+.+|+.....
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~--~~v~v~d~~~~~ 306 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS--RELKVFTISGKV 306 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT--TEEEEEETTSCE
T ss_pred EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC--CcEEEEEecCCc
Confidence 655 4788999999998772211 1 12369999999887666544 356777765544
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=2.8e-26 Score=192.84 Aligned_cols=244 Identities=15% Similarity=0.085 Sum_probs=187.6
Q ss_pred ecCCCceEEEecCCc----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCC-CeeeEEeeCC-CCCeEEEEEeCCCC
Q psy519 31 LESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQ-MYPLRIFVGH-KQDVTCARFHPKIT 104 (351)
Q Consensus 31 ~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~-~~~~~~~~~~-~~~i~~i~~~~~~~ 104 (351)
++.++.|++|++... ...|...|.+++|+|+|+++..+.++.|++||+.+ ++.......+ ...+.+++|+|+++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 456889999999877 56688899999999999984444589999999999 8777666555 36788999999999
Q ss_pred EEEEEeC--CC--cEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEE-EEecCCCCCeEEEEEccC-CceeEEeccCC
Q psy519 105 YIGTGSY--DK--AVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLA-SGGTGSYDKAVRLWSITD-GASVRVFSDHV 178 (351)
Q Consensus 105 ~l~~~~~--dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~d~~i~i~d~~~-~~~~~~~~~~~ 178 (351)
+|++++. ++ .|..+++.+++ ...+..+ ..+..++|+|++++++ ++.. ++.+++|+++. +.....+..+.
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIR---DQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEE---TTEEEEEEEETTTCCEEECCCSS
T ss_pred EEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECC---CCceEEEEEECCCCcceEcccCC
Confidence 9999883 34 45555555554 3444433 4589999999999887 5666 89899998643 33455666778
Q ss_pred CCEEEEEECCCCcEEEEEc-CCCeEEEEEcC-CCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCC-----------CeE
Q psy519 179 SPVLSIAFSPCGKYLASGG-EDGLVLTHELT-TGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLT-----------GTV 245 (351)
Q Consensus 179 ~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~i 245 (351)
..+..++|+|++++++.++ .++.+.+|++. .+.....+. .+...+..++|+|++++|++++.+ +.|
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 8899999999999887665 58889999886 455555553 445678899999999999888765 569
Q ss_pred EEEeCCCCceeee-------eecceeEEecCCceeeeeeccc
Q psy519 246 QFYGWPSASKIGI-------GVYPRCAAQPVGFEAATLAANS 280 (351)
Q Consensus 246 ~i~~~~~~~~~~~-------~~~~~~~~s~~~~~~~~~~~~~ 280 (351)
++||+.+++.... ..+..++|+|++..+++++.+.
T Consensus 252 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 252 QLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 9999998765432 2456789999999988887764
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=4.2e-26 Score=215.25 Aligned_cols=275 Identities=13% Similarity=0.108 Sum_probs=207.0
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCC-----Ce
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQ-----MY 82 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~-----~~ 82 (351)
..|.+++|||+ +.++++. ++.+++||+.+. ...+...+.+++|+|+|+.+....++.|++|++.+ ++
T Consensus 82 ~~v~~~~~spd--~~~~~~~--~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR--GLVVLFT--QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT--TEEEEEE--TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC--CeEEEEE--CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCC
Confidence 57999999999 7777664 489999999876 44566778889999999884446789999999998 77
Q ss_pred eeEEeeCCCCC--------------eEEEEEeCCCCEEEEEe---------------------------------CCCcE
Q psy519 83 PLRIFVGHKQD--------------VTCARFHPKITYIGTGS---------------------------------YDKAV 115 (351)
Q Consensus 83 ~~~~~~~~~~~--------------i~~i~~~~~~~~l~~~~---------------------------------~dg~i 115 (351)
.......+... +.++.|+|||++|++++ .+..|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 66544444433 47899999999999987 44679
Q ss_pred EEEeCCCCceeEEec--cCCCCeEEEEEccCCCEEEEEecCCCCC-----eEEEEEccCCceeEEec--cCCC---CEEE
Q psy519 116 RLWSITDGASVRVFS--DHVSPVLSIAFSPCGKYLASGGTGSYDK-----AVRLWSITDGASVRVFS--DHVS---PVLS 183 (351)
Q Consensus 116 ~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~d~-----~i~i~d~~~~~~~~~~~--~~~~---~i~~ 183 (351)
++||+.+++...... .+...+.+++|+|||+.|++++. ++ .|++||+.+++....+. .+.. .+..
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV---NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE---CTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe---CCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 999999887654442 45677999999999999998776 54 89999999884333332 1221 2457
Q ss_pred EEECC--CCcEEEEEcCCCeEEEEEcC-CCcEEEEeeccCCCCEEE-EEEcCCCCEEEEEeC-CC----eEEEEeCCCCc
Q psy519 184 IAFSP--CGKYLASGGEDGLVLTHELT-TGRVISRFHLQEHEPVTS-LVWSVTGETLVTGSL-TG----TVQFYGWPSAS 254 (351)
Q Consensus 184 ~~~~~--~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~-dg----~i~i~~~~~~~ 254 (351)
+.|+| ||+++++++.++.+++|++. ++..+..+. .+...+.. ++|+|+++.|+.++. ++ .|..||+.+++
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 89999 99999999999999999876 566666664 44556766 899999998766554 44 67777877765
Q ss_pred eeee---eecceeEEecCCceeeeeeccc-eeeEEEeeeceeCc
Q psy519 255 KIGI---GVYPRCAAQPVGFEAATLAANS-RVRTLREMHEIVGP 294 (351)
Q Consensus 255 ~~~~---~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~g~ 294 (351)
.... ..+..++|||+|+.+++...+. ....+.+|+..++.
T Consensus 394 ~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 394 TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 3322 3456789999999888775543 34568888877765
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=4e-24 Score=183.74 Aligned_cols=265 Identities=13% Similarity=0.100 Sum_probs=185.8
Q ss_pred ccEE-EEecCCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCC-CcEEEEeCC--CCe--eeEEeeCC
Q psy519 25 EDVL-ANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRD-TTARLWSLE--QMY--PLRIFVGH 90 (351)
Q Consensus 25 ~~~l-~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d-~~i~vw~~~--~~~--~~~~~~~~ 90 (351)
++++ ++++.++.|++|++... ...+...+.+++|+|++++ ++++.+ +.|.+|++. +++ .+..+..+
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 3444 44477999999998522 3346677889999999986 666665 999999997 444 34445444
Q ss_pred CCCeEEEEEeCCCCEEEEEeC-CCcEEEEeCC---CCceeEEeccCCCCeEEEEEccCCCEEEEEe-cCCCCCeEEEEEc
Q psy519 91 KQDVTCARFHPKITYIGTGSY-DKAVRLWSIT---DGASVRVFSDHVSPVLSIAFSPCGKYLASGG-TGSYDKAVRLWSI 165 (351)
Q Consensus 91 ~~~i~~i~~~~~~~~l~~~~~-dg~i~i~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~d~~i~i~d~ 165 (351)
. .+..++|+|+++++++++. ++.|.+||+. ..+....+.. ...+.+++|+|+++++++++ . ++.|.+||+
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~ 158 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALK---QDRICLFTV 158 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGG---GTEEEEEEE
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCC---CCEEEEEEe
Confidence 4 7889999999998876665 7889999994 3344444443 35688999999999888877 5 899999999
Q ss_pred cC-CceeE----Eec-cCCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcCC--CcE--EEEee-ccC----CCCEEEEEE
Q psy519 166 TD-GASVR----VFS-DHVSPVLSIAFSPCGKYLASG-GEDGLVLTHELTT--GRV--ISRFH-LQE----HEPVTSLVW 229 (351)
Q Consensus 166 ~~-~~~~~----~~~-~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~~-~~~----~~~v~~~~~ 229 (351)
.+ ++... ... .....+..++|+|++++++++ ..++.+.+|++.. ++. ...+. ... ...+..++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 87 54332 222 234578899999999977655 4789999999953 432 22222 111 235778999
Q ss_pred cCCCCEEEE-EeCCCeEEEEeCC--CC--ceeee----eecceeEEecCCceeeeeeccceeeEEEeee--ceeCceE
Q psy519 230 SVTGETLVT-GSLTGTVQFYGWP--SA--SKIGI----GVYPRCAAQPVGFEAATLAANSRVRTLREMH--EIVGPVV 296 (351)
Q Consensus 230 ~~~~~~l~~-~~~dg~i~i~~~~--~~--~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~ 296 (351)
+|++++|++ +..++.|.+|++. ++ +.+.. ..+..++|+|+|..++++..+. ..+.+|+ ..+|...
T Consensus 239 s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 239 TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKS--HHISVYEIVGEQGLLH 314 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTT--CEEEEEEEETTTTEEE
T ss_pred CCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCC--CeEEEEEEcCCCceee
Confidence 999998875 4478999999998 33 22222 2356789999999887776432 2455663 3355433
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=3e-25 Score=217.63 Aligned_cols=305 Identities=9% Similarity=-0.002 Sum_probs=233.4
Q ss_pred ceEEeeecCCccccEEEEecCCCceEEEecCCc----cCC-----------CccceEEEEEC-CCCcE-EEEeCCCcEEE
Q psy519 13 HFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSG-----------HDMTVWSVEAC-SKGLA-LTGSRDTTARL 75 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~-----------~~~~i~~~~~~-~~~~~-~~~~~d~~i~v 75 (351)
.+...+|||+ |++|+++ .++.|++|++... +.. |...+.+++|+ |+|+. ++++ ++.+++
T Consensus 246 ~~~~~~~SpD--G~~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~ 321 (1045)
T 1k32_A 246 DYYPRHLNTD--GRRILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFI 321 (1045)
T ss_dssp SSCEEEEEES--SSCEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEE
T ss_pred CcceeeEcCC--CCEEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEE
Confidence 3567799999 9999987 5889999998443 122 34478999999 99987 5554 899999
Q ss_pred EeCCCCeeeEEeeCCCC-CeEEEEEeCCCCEEEEEeCCCcEE-EEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEec
Q psy519 76 WSLEQMYPLRIFVGHKQ-DVTCARFHPKITYIGTGSYDKAVR-LWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGT 153 (351)
Q Consensus 76 w~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 153 (351)
|++.+++.. .+..|.. .+..++|+ +++.|++++.++.+. +||+.+++... +..+...+..++|+|+|++|++++.
T Consensus 322 ~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~ 398 (1045)
T 1k32_A 322 QDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVAND 398 (1045)
T ss_dssp ECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEET
T ss_pred EcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECC
Confidence 999887654 3556766 89999999 999999998888888 99998776544 4477789999999999999999988
Q ss_pred CCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCC----------eEEEEEcCCCcEEEEeeccCCCC
Q psy519 154 GSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDG----------LVLTHELTTGRVISRFHLQEHEP 223 (351)
Q Consensus 154 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----------~i~i~d~~~~~~~~~~~~~~~~~ 223 (351)
++.|++||+.+++.......|...+..++|+|||++|++++.++ .|++||+.+++ ...+. .+...
T Consensus 399 ---~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~-~~~~~ 473 (1045)
T 1k32_A 399 ---RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAAT-TENSH 473 (1045)
T ss_dssp ---TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECS-CSSSB
T ss_pred ---CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEee-CCCcc
Confidence 99999999999988877778888899999999999998887644 89999998877 44443 45567
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-------------------------------------------e-e--
Q psy519 224 VTSLVWSVTGETLVTGSLTGTVQFYGWPSASK-------------------------------------------I-G-- 257 (351)
Q Consensus 224 v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~-------------------------------------------~-~-- 257 (351)
+..++|+|||++|++++.++...+|+...... + .
T Consensus 474 ~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~ 553 (1045)
T 1k32_A 474 DYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPIN 553 (1045)
T ss_dssp EEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECS
T ss_pred cCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcC
Confidence 88999999999999998877666665322111 0 0
Q ss_pred --eeecceeEEecCCceeeee----------eccceeeEEEeeeceeCceEEEee--EEEEecCCceeeccEEEecCCcc
Q psy519 258 --IGVYPRCAAQPVGFEAATL----------AANSRVRTLREMHEIVGPVVVVES--FIVEIRPDKWYEANLIVLDDDLK 323 (351)
Q Consensus 258 --~~~~~~~~~s~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~ 323 (351)
...+..+.++|+|..++.. ........+..|+..+++...+.. ..+.|+||+.++... .++.+.
T Consensus 554 ~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~v~~~~~S~DG~~l~~~--~~~~i~ 631 (1045)
T 1k32_A 554 VDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVR--KDDGKI 631 (1045)
T ss_dssp CCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEEEECTTSCEEEEE--ETTSCE
T ss_pred CCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEeecCcceEEECCCCCEEEEE--cCCcEE
Confidence 1233467889999866641 223334567788877776554432 236899999986643 566899
Q ss_pred ccceeeee
Q psy519 324 ECNLETYS 331 (351)
Q Consensus 324 ~~~~~~~~ 331 (351)
.|++.+..
T Consensus 632 ~~d~~~~~ 639 (1045)
T 1k32_A 632 YTFPLEKP 639 (1045)
T ss_dssp EEEESSCT
T ss_pred EEeCccCc
Confidence 99997765
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.5e-24 Score=186.39 Aligned_cols=237 Identities=13% Similarity=0.153 Sum_probs=172.8
Q ss_pred CccceEEeeecCCccccEEEEecCC-CceEEEecC--Cc-------cCCCccceEEEEECCCCcE-EEEe-CCCcEEEEe
Q psy519 10 DHKHFIQNSFKPETVEDVLANLESQ-KNLQSRYLP--YY-------TSGHDMTVWSVEACSKGLA-LTGS-RDTTARLWS 77 (351)
Q Consensus 10 ~~~~v~~~~~sp~~~~~~l~~~~~~-~~i~i~~~~--~~-------~~~~~~~i~~~~~~~~~~~-~~~~-~d~~i~vw~ 77 (351)
+...+.+++|+|+ +++|++++.+ +.|.+|++. .. ... ...+..++|+|++++ ++++ .++.|.+||
T Consensus 36 ~~~~~~~~~~spd--g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 36 VPGQVQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp CSSCCCCEEECTT--SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-SSCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCCCceEEECCC--CCEEEEeecCCCeEEEEEecCCCCceeecccccc-CCCCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 5567788999999 9988888776 899999997 32 122 237889999999986 4444 588999999
Q ss_pred CC---CCeeeEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCcEEEEeCCC-CceeE----Eec-cCCCCeEEEEEccCCCE
Q psy519 78 LE---QMYPLRIFVGHKQDVTCARFHPKITYIGTGS-YDKAVRLWSITD-GASVR----VFS-DHVSPVLSIAFSPCGKY 147 (351)
Q Consensus 78 ~~---~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~----~~~-~~~~~i~~~~~~~~~~~ 147 (351)
+. ..+....+.. ...+.+++|+|+++++++++ .++.|++||+.+ ++... .+. .....+.+++|+|++++
T Consensus 113 ~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 94 4444455543 34588999999999888877 789999999987 54432 222 23457889999999998
Q ss_pred EEEEe-cCCCCCeEEEEEccC--Cce--eEEec---cC---CCCEEEEEECCCCcEEEE-EcCCCeEEEEEcC--CC--c
Q psy519 148 LASGG-TGSYDKAVRLWSITD--GAS--VRVFS---DH---VSPVLSIAFSPCGKYLAS-GGEDGLVLTHELT--TG--R 211 (351)
Q Consensus 148 l~~~~-~~~~d~~i~i~d~~~--~~~--~~~~~---~~---~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~--~~--~ 211 (351)
+++++ . ++.|.+||+.. ++. ..... .. ...+..++|+|++++|++ ...++.|.+||+. ++ +
T Consensus 192 l~~~~~~---~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~ 268 (343)
T 1ri6_A 192 AYCVNEL---NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 268 (343)
T ss_dssp EEEEETT---TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred EEEEeCC---CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE
Confidence 77665 4 89999999954 332 22222 11 235678999999987774 4578999999998 33 3
Q ss_pred EEEEeeccCCCCEEEEEEcCCCCEEEEEe-CCCeEEEEeC--CCCce
Q psy519 212 VISRFHLQEHEPVTSLVWSVTGETLVTGS-LTGTVQFYGW--PSASK 255 (351)
Q Consensus 212 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~~~--~~~~~ 255 (351)
.+..+. ....+..++|+|++++|++++ .++.|.+|++ .+++.
T Consensus 269 ~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 269 KEGFQP--TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp EEEEEE--CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred Eeeeec--CCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 333333 334488999999999888887 5799999954 45543
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=1.4e-24 Score=186.11 Aligned_cols=258 Identities=12% Similarity=-0.018 Sum_probs=198.1
Q ss_pred cEEEEecCCCceEEEecCCc----cCCCcc---ceEEEEECCCCcE--EEEeCCCcEEEEeCCCCeeeEEeeCC-----C
Q psy519 26 DVLANLESQKNLQSRYLPYY----TSGHDM---TVWSVEACSKGLA--LTGSRDTTARLWSLEQMYPLRIFVGH-----K 91 (351)
Q Consensus 26 ~~l~~~~~~~~i~i~~~~~~----~~~~~~---~i~~~~~~~~~~~--~~~~~d~~i~vw~~~~~~~~~~~~~~-----~ 91 (351)
++|++++.++.|.+||..+. ...... .+..++|+|+++. +++..++.|.+||+.+++.+..+... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 57889999999999999876 111222 4788999999964 56667899999999999887766532 1
Q ss_pred CCeEEEEEeCCCCEEEEEe------------CCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 92 QDVTCARFHPKITYIGTGS------------YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 92 ~~i~~i~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
..+..++|+|+++++++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++++++ ++.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~-----~~~ 155 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL-----GRD 155 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE-----SSS
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe-----CCe
Confidence 2567899999999998886 579999999999888777764 4567889999999988887 578
Q ss_pred EEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCC-C-----------------------eEEEEEcCCCcEEEE
Q psy519 160 VRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGED-G-----------------------LVLTHELTTGRVISR 215 (351)
Q Consensus 160 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g-----------------------~i~i~d~~~~~~~~~ 215 (351)
|.+||+.+++....+..+... ..+.|+|+++.++..+.. + .|.+||+.+++.. .
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~ 233 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-M 233 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-E
T ss_pred EEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-E
Confidence 999999999887777544311 123789998876655432 2 4689999988765 3
Q ss_pred eec-cCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eecceeEEecCCceeeeeeccceeeEEEeeec
Q psy519 216 FHL-QEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPVGFEAATLAANSRVRTLREMHE 290 (351)
Q Consensus 216 ~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
+.. .+...+..++|+|++++++++ ++.|.+||+.+++.+.. ..+..++|+|+|+.++++.. ...+.+|+.
T Consensus 234 ~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~i~v~d~ 308 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGA---LGDLAAYDA 308 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESB---SSEEEEEET
T ss_pred eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcC---CCcEEEEEC
Confidence 322 334578899999999999888 79999999999887655 34567999999998877644 356888888
Q ss_pred eeCceE
Q psy519 291 IVGPVV 296 (351)
Q Consensus 291 ~~g~~~ 296 (351)
.+++..
T Consensus 309 ~~~~~~ 314 (337)
T 1pby_B 309 ETLEKK 314 (337)
T ss_dssp TTCCEE
T ss_pred cCCcEE
Confidence 877643
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=3.6e-24 Score=183.48 Aligned_cols=268 Identities=9% Similarity=0.049 Sum_probs=195.6
Q ss_pred EECCCCcE--EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeC-CCcEEEEeCCCCce-eEEeccC
Q psy519 57 EACSKGLA--LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSY-DKAVRLWSITDGAS-VRVFSDH 132 (351)
Q Consensus 57 ~~~~~~~~--~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-dg~i~i~d~~~~~~-~~~~~~~ 132 (351)
.|.+++.. ++.+.++.|.+||+++++.+..+..+...+ .++|+|+++++++++. ++.|++||+.+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 34554433 888899999999999999888877666667 9999999997766665 88999999999887 6777666
Q ss_pred CCCeEEEEEccCCCEEEEEecCCCC-C--eEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEE-cCCCe-EEEEEc
Q psy519 133 VSPVLSIAFSPCGKYLASGGTGSYD-K--AVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASG-GEDGL-VLTHEL 207 (351)
Q Consensus 133 ~~~i~~~~~~~~~~~l~~~~~~~~d-~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~-i~i~d~ 207 (351)
..+..+++|+|++++++++.. + + .|.+||+.+++.+..+..+ .....++|+|+|++++++ ..++. +.+|++
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~---~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTG---LNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCC---SSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred CCCccceEECCCCCEEEEecC---CCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 666655999999999995544 3 2 8999999999888877543 456899999999865554 55578 999998
Q ss_pred CCCcEEEE---eeccCCCCEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCce---eee----eecceeEEecCCceeeee
Q psy519 208 TTGRVISR---FHLQEHEPVTSLVWSVTGETLVTG-SLTGTVQFYGWPSASK---IGI----GVYPRCAAQPVGFEAATL 276 (351)
Q Consensus 208 ~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~---~~~----~~~~~~~~s~~~~~~~~~ 276 (351)
.....+.. ........+..++|+|+|++++++ ..++.|.+||+.+++. +.. .....++|+|+|+.+++.
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEE
Confidence 75433211 112344568999999999966554 4689999999998887 543 344578999999987665
Q ss_pred eccceeeEEEeeeceeCceEEEeeEE---------------EEecCCceeeccEEEecCCccccceeeee
Q psy519 277 AANSRVRTLREMHEIVGPVVVVESFI---------------VEIRPDKWYEANLIVLDDDLKECNLETYS 331 (351)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 331 (351)
... ...+.+|+..+++...+.... +.|+|++.++...-..++.+..|++....
T Consensus 239 ~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 239 TES--TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CSS--EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EcC--CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 542 335777888877763332211 37889998764442234578889886543
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=7.4e-25 Score=207.82 Aligned_cols=273 Identities=10% Similarity=0.022 Sum_probs=203.0
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc-------cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeee
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~ 84 (351)
..+.+++|||| |++|++++. +.|++|++.+. +..|...+..++|+|||+++....++.|++||+.+++..
T Consensus 109 ~~v~~~~~SpD--g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 109 TGIVDYQWSPD--AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQM 185 (741)
T ss_dssp EESCCCEECTT--SSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEE
T ss_pred cCcceeEECCC--CCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEE
Confidence 34788999999 999999876 89999998754 445678899999999999844444679999999998776
Q ss_pred EEeeCCCCC----------------eEEEEEeCCCCEEEEEeCCC---------------------------------cE
Q psy519 85 RIFVGHKQD----------------VTCARFHPKITYIGTGSYDK---------------------------------AV 115 (351)
Q Consensus 85 ~~~~~~~~~----------------i~~i~~~~~~~~l~~~~~dg---------------------------------~i 115 (351)
.....+... +..++|+|||++|++++.|+ .|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 555444332 47799999999999987665 78
Q ss_pred EEEeCCC-CceeEEec--cCCCCeEEEEEccCCCEEEEEec--CCCCCeEEEEEccCCceeEEeccCCC----CEEEEEE
Q psy519 116 RLWSITD-GASVRVFS--DHVSPVLSIAFSPCGKYLASGGT--GSYDKAVRLWSITDGASVRVFSDHVS----PVLSIAF 186 (351)
Q Consensus 116 ~i~d~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~--~~~d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~ 186 (351)
++||+.+ ++...... .+...+..++| |||++|+++.. ...+..|++||+.+++....+..+.. .+..++|
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 9999988 77655443 36678999999 99999987653 22357899999999987776655443 3457899
Q ss_pred CCCCcEEEEEcCCCeEEEEEcC-CCcEEEEeeccCCCCEEEE-EEcCCCCEEEE-EeCCC--eEEEEeCCC-Cceeee--
Q psy519 187 SPCGKYLASGGEDGLVLTHELT-TGRVISRFHLQEHEPVTSL-VWSVTGETLVT-GSLTG--TVQFYGWPS-ASKIGI-- 258 (351)
Q Consensus 187 ~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~-~~~dg--~i~i~~~~~-~~~~~~-- 258 (351)
+|||+++++++.+|.+.+|.+. ++. ...+. .+...+..+ .|+|+++.|+. ++.++ .+++|++.. +.....
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~-~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALT-HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS 422 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESC-CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeee-ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence 9999999999999977777665 344 55443 445678777 59999997765 44455 899998864 332221
Q ss_pred --eecceeEEecCCceeeeeecc-ceeeEEEeeec
Q psy519 259 --GVYPRCAAQPVGFEAATLAAN-SRVRTLREMHE 290 (351)
Q Consensus 259 --~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~~ 290 (351)
..+..++|||+|+.+++..++ .....+.+++.
T Consensus 423 ~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 423 KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 334578999999988776554 33345666654
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=4e-25 Score=203.96 Aligned_cols=264 Identities=12% Similarity=0.020 Sum_probs=198.2
Q ss_pred ccceEEeeecCCccccEEEEecC-CCceEEEecCCc----cCCCc-cceEEEEECCCCcE-EEEeC---CCcEEEEeCCC
Q psy519 11 HKHFIQNSFKPETVEDVLANLES-QKNLQSRYLPYY----TSGHD-MTVWSVEACSKGLA-LTGSR---DTTARLWSLEQ 80 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~-~~~i~i~~~~~~----~~~~~-~~i~~~~~~~~~~~-~~~~~---d~~i~vw~~~~ 80 (351)
..+|.+++|+|| |++||+++. +|+++||++..+ +..|. ..+..++|+|+ ++ ++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~D--G~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVD--GDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEET--TTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCC--CCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 567999999999 999999877 999999998665 44454 68999999999 66 55554 45555654432
Q ss_pred ---CeeeEEeeCCCCCeEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCC
Q psy519 81 ---MYPLRIFVGHKQDVTCARFHPKITY-IGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 81 ---~~~~~~~~~~~~~i~~i~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
+... .+... ..+...+|+|+++. +++.+.++.+.+||+.+++.......+ . .+++|+|||+++++++.
T Consensus 98 ~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~--- 169 (582)
T 3o4h_A 98 SRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGF--- 169 (582)
T ss_dssp TSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEE---
T ss_pred cCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEE---
Confidence 2222 33222 23446688888753 334444555669999988766555433 3 78999999999998776
Q ss_pred C----CeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCC--eEEEEEcCCCcEEEEeeccCCCCEEEEE--
Q psy519 157 D----KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDG--LVLTHELTTGRVISRFHLQEHEPVTSLV-- 228 (351)
Q Consensus 157 d----~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~-- 228 (351)
+ +.|++||+.+++.. .+..+...+..++|+|||++|+++..++ .|++||+.+++.. .+. .+...+..++
T Consensus 170 ~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~-~~~~~~~~~~~~ 246 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE-LPSKDFSSYRPT 246 (582)
T ss_dssp EETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC-CSCSHHHHHCCS
T ss_pred cCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc-CCCcChhhhhhc
Confidence 5 78999999887754 5677888899999999999999888888 8999999988876 432 4444555566
Q ss_pred ------EcCCCCEEEEEeCCCeEEEEeCCCCceee--eeecceeEEecCCceeeeeeccceeeEEEeeece
Q psy519 229 ------WSVTGETLVTGSLTGTVQFYGWPSASKIG--IGVYPRCAAQPVGFEAATLAANSRVRTLREMHEI 291 (351)
Q Consensus 229 ------~~~~~~~l~~~~~dg~i~i~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
|+|||.++++++.|+.+++|++ ++... ...+..++|+ ++..+++.+.+.....+.+++..
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 9999998999999999999999 55442 2445678999 99988888888877777777654
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=7.7e-25 Score=206.62 Aligned_cols=309 Identities=12% Similarity=0.087 Sum_probs=211.6
Q ss_pred eEEeeecCCccccEEEEecCCCceEEEecCCccC------CCc-----------------cceEEEEECCCCcEEEEeCC
Q psy519 14 FIQNSFKPETVEDVLANLESQKNLQSRYLPYYTS------GHD-----------------MTVWSVEACSKGLALTGSRD 70 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~~~------~~~-----------------~~i~~~~~~~~~~~~~~~~d 70 (351)
+..+.|+ . + .+++.+.++ | +||+.++.. .+. ..|.+++|+|+ ..+..+.+
T Consensus 28 ~~~~~w~-g--~-~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~ 100 (706)
T 2z3z_A 28 VVGLQWM-G--D-NYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ 100 (706)
T ss_dssp CTTCEEE-T--T-EEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET
T ss_pred CCCCcCc-C--C-eEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEEC
Confidence 3446777 4 4 455556677 8 999876622 122 46999999999 55333356
Q ss_pred CcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCC-----CceeEEeccCCCC----------
Q psy519 71 TTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITD-----GASVRVFSDHVSP---------- 135 (351)
Q Consensus 71 ~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~---------- 135 (351)
+.+++||+.+++... +..+...+.+++|+|||+.|+++ .++.|++||+.+ ++.......+...
T Consensus 101 ~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 101 GGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp TEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred CEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 999999999887654 44566778889999999999985 589999999998 7766544433332
Q ss_pred ----eEEEEEccCCCEEEEEec------------------------------CCCCCeEEEEEccCCceeEEec--cCCC
Q psy519 136 ----VLSIAFSPCGKYLASGGT------------------------------GSYDKAVRLWSITDGASVRVFS--DHVS 179 (351)
Q Consensus 136 ----i~~~~~~~~~~~l~~~~~------------------------------~~~d~~i~i~d~~~~~~~~~~~--~~~~ 179 (351)
+.+++|+|||++|++++. ...+..|++||+.+++...... .+..
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 478999999999998862 0015789999998887544432 4566
Q ss_pred CEEEEEECCCCcEEEEEcCCC-----eEEEEEcCCCcEEEEeec-cCCC---CEEEEEEcC--CCCEEEEEeCCCeEEEE
Q psy519 180 PVLSIAFSPCGKYLASGGEDG-----LVLTHELTTGRVISRFHL-QEHE---PVTSLVWSV--TGETLVTGSLTGTVQFY 248 (351)
Q Consensus 180 ~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~-~~~~---~v~~~~~~~--~~~~l~~~~~dg~i~i~ 248 (351)
.+..++|+|||++|++++.++ .|++||+.+++....+.. .... .+..++|+| +|+++++++.||.+++|
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~ 338 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY 338 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence 789999999999999887665 899999998844433321 2221 246789999 99999999999999999
Q ss_pred eCC-CCceeee-----eecce-eEEecCCceeeeeeccce--eeEEEeeeceeCceEEEe----eEEEEecCCceeeccE
Q psy519 249 GWP-SASKIGI-----GVYPR-CAAQPVGFEAATLAANSR--VRTLREMHEIVGPVVVVE----SFIVEIRPDKWYEANL 315 (351)
Q Consensus 249 ~~~-~~~~~~~-----~~~~~-~~~s~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~ 315 (351)
.+. +++.+.. ..+.. ++|+|+|..+++.+.+.. ...+..|+..++....+. .....|+||+.+....
T Consensus 339 ~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 339 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp EEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEE
T ss_pred EEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEE
Confidence 876 4444332 12333 689999998887776654 235555665555433221 1236899999876443
Q ss_pred EEec---CCccccceeeee
Q psy519 316 IVLD---DDLKECNLETYS 331 (351)
Q Consensus 316 ~~~~---~~i~~~~~~~~~ 331 (351)
.... ..+..|++++..
T Consensus 419 ~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 419 FQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EECSSCSCEEEEEESSSCE
T ss_pred ecCCCCCcEEEEEECCCCe
Confidence 2222 236677765543
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=3.9e-25 Score=209.17 Aligned_cols=265 Identities=11% Similarity=0.026 Sum_probs=191.3
Q ss_pred ceEEeeecCCccccEEEEecCC---------CceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCCCcEEE
Q psy519 13 HFIQNSFKPETVEDVLANLESQ---------KNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRDTTARL 75 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~---------~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~v 75 (351)
.|.+++|||| |++|++++.+ +.+.+||+.+. ..+|...+..++|+|||+. +.++ ++.|++
T Consensus 62 ~v~~~~~SpD--g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~-~~~i~~ 138 (723)
T 1xfd_A 62 RAIRYEISPD--REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYY 138 (723)
T ss_dssp TCSEEEECTT--SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEE
T ss_pred ccceEEECCC--CCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE-CCeEEE
Confidence 4899999999 9999998764 67889999876 2234455889999999987 5554 489999
Q ss_pred EeCCCCeeeEEeeCCCCCe------------------EEEEEeCCCCEEEEEeCCC------------------------
Q psy519 76 WSLEQMYPLRIFVGHKQDV------------------TCARFHPKITYIGTGSYDK------------------------ 113 (351)
Q Consensus 76 w~~~~~~~~~~~~~~~~~i------------------~~i~~~~~~~~l~~~~~dg------------------------ 113 (351)
|++.+++.......+...+ .+++|+|||+.|++++.++
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence 9999988776665544433 7899999999999887543
Q ss_pred ----------cEEEEeCCCCceeEEeccC------CCCeEEEEEccCCCEEEEEec-CCCCCeEEEEEccCCceeEEecc
Q psy519 114 ----------AVRLWSITDGASVRVFSDH------VSPVLSIAFSPCGKYLASGGT-GSYDKAVRLWSITDGASVRVFSD 176 (351)
Q Consensus 114 ----------~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~-~~~d~~i~i~d~~~~~~~~~~~~ 176 (351)
.|++||+.+++....+..+ ...+..++|+|||+++++... ...+..|++||+.+++....+..
T Consensus 219 ~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 298 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED 298 (723)
T ss_dssp CBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe
Confidence 7999999988765666543 567899999999998876643 12246899999999887665543
Q ss_pred -CCCCE----EEEEECCCCcEEEE--EcCCC------eEEEEE-cCCCcE--EEEeeccCCCCEEE-EEEcCCCCEEEEE
Q psy519 177 -HVSPV----LSIAFSPCGKYLAS--GGEDG------LVLTHE-LTTGRV--ISRFHLQEHEPVTS-LVWSVTGETLVTG 239 (351)
Q Consensus 177 -~~~~i----~~~~~~~~~~~l~~--~~~dg------~i~i~d-~~~~~~--~~~~~~~~~~~v~~-~~~~~~~~~l~~~ 239 (351)
+...+ ..++|+|||+.|+. +..++ .|++|| ...+.. ...+. .+...+.. ++|+|||+.|+..
T Consensus 299 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~~~~~~~~spdg~~l~~~ 377 (723)
T 1xfd_A 299 ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT-SGDWDVTKILAYDEKGNKIYFL 377 (723)
T ss_dssp ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC-CSSSCEEEEEEEETTTTEEEEE
T ss_pred ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee-cCCeEEEeeeEEcCCCCEEEEE
Confidence 23333 37899999997665 44566 577777 344431 33332 23344554 6999999999776
Q ss_pred eCC---CeEEEEeCCCCc---eee-------eeecceeEEecCCceeeeeeccce
Q psy519 240 SLT---GTVQFYGWPSAS---KIG-------IGVYPRCAAQPVGFEAATLAANSR 281 (351)
Q Consensus 240 ~~d---g~i~i~~~~~~~---~~~-------~~~~~~~~~s~~~~~~~~~~~~~~ 281 (351)
+.+ +.+++|++.... ... ...+..++|+|+|+.+++...+..
T Consensus 378 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 432 (723)
T 1xfd_A 378 STEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG 432 (723)
T ss_dssp ESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred EcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence 554 789999986432 111 123567999999998887665544
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.8e-24 Score=212.20 Aligned_cols=274 Identities=8% Similarity=0.010 Sum_probs=216.8
Q ss_pred CccceEEeeec-CCccccEEEEecCCCceEEEecCCc----cCCCcc-ceEEEEECCCCcE-EEEeCCCcEE-EEeCCCC
Q psy519 10 DHKHFIQNSFK-PETVEDVLANLESQKNLQSRYLPYY----TSGHDM-TVWSVEACSKGLA-LTGSRDTTAR-LWSLEQM 81 (351)
Q Consensus 10 ~~~~v~~~~~s-p~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~-~i~~~~~~~~~~~-~~~~~d~~i~-vw~~~~~ 81 (351)
|...+.+++|| |+ |++|++++ ++.+.+|+.... ...|.. .+..++|+ +|+. +.++.+..+. +|++.++
T Consensus 294 ~~~~v~~~~~S~pd--G~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 294 SIPSKFAEDFSPLD--GDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp ECGGGGEEEEEECG--GGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred cccccceeeecCCC--CCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 34478999999 99 99999887 789999998766 456666 89999999 9876 7777788888 9999887
Q ss_pred eeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecC-------
Q psy519 82 YPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTG------- 154 (351)
Q Consensus 82 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~------- 154 (351)
+... +.+|...+..++|+|||+.|++++.++.|++||+.+++.......|...+.+++|+|||++|++++..
T Consensus 370 ~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 370 KAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp CEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred CceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccC
Confidence 6544 44788899999999999999999999999999999998887777788899999999999999888751
Q ss_pred CCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcE----------------------
Q psy519 155 SYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRV---------------------- 212 (351)
Q Consensus 155 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---------------------- 212 (351)
..++.|++||+.+++ ...+..|...+..++|+|||++|+.++.++....|+......
T Consensus 449 ~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (1045)
T 1k32_A 449 YVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTK 527 (1045)
T ss_dssp CCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGG
T ss_pred CCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccc
Confidence 012489999998876 667778888899999999999999998877666666432211
Q ss_pred ---------------------EEEeeccCCCCEEEEEEcCCCCEEEE-------------EeCCCeEEEEeCCCCceeee
Q psy519 213 ---------------------ISRFHLQEHEPVTSLVWSVTGETLVT-------------GSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 213 ---------------------~~~~~~~~~~~v~~~~~~~~~~~l~~-------------~~~dg~i~i~~~~~~~~~~~ 258 (351)
+..+. .+...+..++++|+++++++ ......+.+||+.+++....
T Consensus 528 ~~~~~~~~~~~~~d~~g~~~~~~~l~-~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l 606 (1045)
T 1k32_A 528 LVPRSMTSEAGEYDLNDMYKRSSPIN-VDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEV 606 (1045)
T ss_dssp CCCGGGSCCCCCCCCTTGGGGCEECS-CCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEE
T ss_pred cCcCccccccccccccCHhHceEEcC-CCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEe
Confidence 01111 13356889999999987775 12345789999988875433
Q ss_pred -eecceeEEecCCceeeeeeccceeeEEEeeeceeCc
Q psy519 259 -GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGP 294 (351)
Q Consensus 259 -~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~ 294 (351)
..+..+++||||+.+++...+ .+++|+..++.
T Consensus 607 ~~~v~~~~~S~DG~~l~~~~~~----~i~~~d~~~~~ 639 (1045)
T 1k32_A 607 KNNLTDLRLSADRKTVMVRKDD----GKIYTFPLEKP 639 (1045)
T ss_dssp EEEEEEEEECTTSCEEEEEETT----SCEEEEESSCT
T ss_pred ecCcceEEECCCCCEEEEEcCC----cEEEEeCccCc
Confidence 456788999999999987665 47788877766
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=3.2e-23 Score=178.94 Aligned_cols=262 Identities=9% Similarity=-0.015 Sum_probs=200.0
Q ss_pred CccceEEEEECCCCcE-EEEeC-------CCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEE-EeCCCcEEEEe
Q psy519 49 HDMTVWSVEACSKGLA-LTGSR-------DTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGT-GSYDKAVRLWS 119 (351)
Q Consensus 49 ~~~~i~~~~~~~~~~~-~~~~~-------d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~-~~~dg~i~i~d 119 (351)
....+..++|+|+++. ++++. ++.|.+||..+++.+..+... ..+..++|+|+++.+++ ...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3456789999999976 44442 568999999999888777643 44678999999996554 45579999999
Q ss_pred CCCCceeEEeccCCC---------CeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCC
Q psy519 120 ITDGASVRVFSDHVS---------PVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCG 190 (351)
Q Consensus 120 ~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 190 (351)
+.+++.+..+..+.. .+.+++|+|++++++++.. ..++.|.+||+.+++.+..+..+...+..++|+|++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE-SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec-CCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 999998877765332 2788999999998887762 117889999999999888887566667889999999
Q ss_pred cEEEEEcCCCeEEEEEcCCCcEEEEeecc---CCCCEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeee---ecce
Q psy519 191 KYLASGGEDGLVLTHELTTGRVISRFHLQ---EHEPVTSLVWSVTGETLVTGSL-TGTVQFYGWPSASKIGIG---VYPR 263 (351)
Q Consensus 191 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~---~~~~ 263 (351)
+++++++.++.+.+||+.+++....+... +...+..++|+|+++++++++. ++.|.+||..+++.+... ....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 276 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA 276 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCce
Confidence 99999999999999999999888777642 2346788999999998777665 599999999998877553 3356
Q ss_pred eEEecCCceeeeeeccceeeEEEeeeceeCceEEEee-----EEEEecCCceeecc
Q psy519 264 CAAQPVGFEAATLAANSRVRTLREMHEIVGPVVVVES-----FIVEIRPDKWYEAN 314 (351)
Q Consensus 264 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~ 314 (351)
++|+|+|..+.+..... ..+.+|+..+++...... ..+.|+|++.+...
T Consensus 277 ~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYV 330 (353)
T ss_dssp EEEETTTTEEEEEETTT--TEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEE
T ss_pred EEECCCCCEEEEEECCC--CeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEE
Confidence 89999999766655322 356777776665443221 22578888875543
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.1e-24 Score=183.19 Aligned_cols=227 Identities=15% Similarity=0.154 Sum_probs=174.4
Q ss_pred CCccceEEeeecCCccccEEEEecCCCceEEEecCC-c-----cCCC-ccceEEEEECCCCcE-EEEe--CC--CcEEEE
Q psy519 9 GDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPY-Y-----TSGH-DMTVWSVEACSKGLA-LTGS--RD--TTARLW 76 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~-~-----~~~~-~~~i~~~~~~~~~~~-~~~~--~d--~~i~vw 76 (351)
.|...|.+++|+|+ +++|++++ ++.|++|++.. . ...+ ...+.+++|+|++++ ++++ .+ ..|.++
T Consensus 39 ~~~~~v~~~~~spd--g~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 39 QTPELFEAPNWSPD--GKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp EESSCCEEEEECTT--SSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred cCCcceEeeEECCC--CCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 36778999999999 99999986 78999999988 5 3333 467889999999987 6666 33 345555
Q ss_pred eCCCCeeeEEeeCCCCCeEEEEEeCCCCEEE-EEeCCCcEEEEeCCC-CceeEEeccCCCCeEEEEEccCCCEEEEEe-c
Q psy519 77 SLEQMYPLRIFVGHKQDVTCARFHPKITYIG-TGSYDKAVRLWSITD-GASVRVFSDHVSPVLSIAFSPCGKYLASGG-T 153 (351)
Q Consensus 77 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~ 153 (351)
++.+++ ...+..+ ..+..++|+|+++.|+ ++..++.+.+|+++. +.....+..+...+.+++|+|+++++++++ .
T Consensus 116 ~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 193 (297)
T 2ojh_A 116 PSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSR 193 (297)
T ss_dssp ETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECT
T ss_pred ECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecC
Confidence 555554 3344333 3488999999999877 677889899998632 334455666788999999999999888765 4
Q ss_pred CCCCCeEEEEEcc-CCceeEEeccCCCCEEEEEECCCCcEEEEEcCC-----------CeEEEEEcCCCcEEEEeec-cC
Q psy519 154 GSYDKAVRLWSIT-DGASVRVFSDHVSPVLSIAFSPCGKYLASGGED-----------GLVLTHELTTGRVISRFHL-QE 220 (351)
Q Consensus 154 ~~~d~~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~-~~ 220 (351)
++.+++|++. .+.....+..+...+..++|+|++++|++++.+ +.|++||+.+++....... .+
T Consensus 194 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 270 (297)
T 2ojh_A 194 ---TGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG 270 (297)
T ss_dssp ---TSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES
T ss_pred ---CCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC
Confidence 7889999886 556677777788889999999999999888765 5699999988765443322 34
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCC
Q psy519 221 HEPVTSLVWSVTGETLVTGSLTG 243 (351)
Q Consensus 221 ~~~v~~~~~~~~~~~l~~~~~dg 243 (351)
...+..++|+|++++|++++.+.
T Consensus 271 ~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 271 QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CcccccceECCCCCEEEEEEecc
Confidence 56789999999999998877653
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=1.2e-23 Score=181.33 Aligned_cols=233 Identities=10% Similarity=0.033 Sum_probs=182.0
Q ss_pred EeeecCCccccEEEEecCCCceEEEecCCc-----cCCC-ccceEEEEECCCCcE--EEEeCCCcEEEEeCCCCeeeEEe
Q psy519 16 QNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGH-DMTVWSVEACSKGLA--LTGSRDTTARLWSLEQMYPLRIF 87 (351)
Q Consensus 16 ~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~-~~~i~~~~~~~~~~~--~~~~~d~~i~vw~~~~~~~~~~~ 87 (351)
.++++++ +.++++++.++.|.+||..+. ...+ ...+..++|+|+++. ++...++.|.+||+.+++.+..+
T Consensus 4 g~~~~~~--~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAG--HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTT--CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCC--CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 4678888 999999999999999999876 2212 125778999999974 56667899999999999887776
Q ss_pred eCCC------CCeEEEEEeCCCCEEEEEeCC------------CcEEEEeCCCCce---eEEeccCCCCeEEEEEccCCC
Q psy519 88 VGHK------QDVTCARFHPKITYIGTGSYD------------KAVRLWSITDGAS---VRVFSDHVSPVLSIAFSPCGK 146 (351)
Q Consensus 88 ~~~~------~~i~~i~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~ 146 (351)
..+. ..+..++|+|+++++++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS 160 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc
Confidence 5332 237789999999999988865 8999999988543 33333 344688899999999
Q ss_pred EEEEEecCCCCCeEEEEEccCCceeEEeccCC------------------------------------------------
Q psy519 147 YLASGGTGSYDKAVRLWSITDGASVRVFSDHV------------------------------------------------ 178 (351)
Q Consensus 147 ~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~------------------------------------------------ 178 (351)
++++ ++.|.+||+.+++.+..+..+.
T Consensus 161 -l~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 161 -LYVA-----GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp -EEEE-----SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred -EEEc-----cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 5554 3449999999888766654321
Q ss_pred --------------------CCEEEEEECC-CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEE
Q psy519 179 --------------------SPVLSIAFSP-CGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLV 237 (351)
Q Consensus 179 --------------------~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 237 (351)
..+..++|+| ++++++++ ++.|.+||+.+++.+..+.. ...+..++|+|++++|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~ 310 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLY 310 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEE
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEE
Confidence 1345677889 99999888 88999999999988877753 34578999999999888
Q ss_pred EEeCCCeEEEEeCCCCceeeeeec
Q psy519 238 TGSLTGTVQFYGWPSASKIGIGVY 261 (351)
Q Consensus 238 ~~~~dg~i~i~~~~~~~~~~~~~~ 261 (351)
+++.++.|.+||+.+++.+.....
T Consensus 311 ~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 311 LGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EESBSSEEEEEETTTTEEEEEEEC
T ss_pred EecCCCeEEEEeccccceeeeeec
Confidence 888899999999999887766443
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=1.9e-22 Score=174.01 Aligned_cols=262 Identities=11% Similarity=0.097 Sum_probs=178.3
Q ss_pred CCceEEEecCCc--------cCCCccceEEEEECCCCcEEEEeC---CCcEEEEeCCCCe--eeEEeeCCCCCeEEEEEe
Q psy519 34 QKNLQSRYLPYY--------TSGHDMTVWSVEACSKGLALTGSR---DTTARLWSLEQMY--PLRIFVGHKQDVTCARFH 100 (351)
Q Consensus 34 ~~~i~i~~~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~---d~~i~vw~~~~~~--~~~~~~~~~~~i~~i~~~ 100 (351)
++.|.+|.++.. ...+...+..++|+|+|++++++. ++.|++|++.+++ .+..+..+...+..++|+
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 456777777643 223446677899999998744433 6899999997765 344444567778899999
Q ss_pred CCCCEEEEEe-CCCcEEEEeCCC-Cc--eeEEecc---------CCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEcc-
Q psy519 101 PKITYIGTGS-YDKAVRLWSITD-GA--SVRVFSD---------HVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSIT- 166 (351)
Q Consensus 101 ~~~~~l~~~~-~dg~i~i~d~~~-~~--~~~~~~~---------~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~- 166 (351)
|++++|++++ .++.+.+|++.. +. .+..+.. ....+.+++|+|+|+++++... ++.|.+||+.
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~---~~~v~~~~~~~ 171 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG---SDKVYVYNVSD 171 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT---TTEEEEEEECT
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC---CCEEEEEEECC
Confidence 9999888887 679999999963 22 2333321 1234889999999995555444 7899999998
Q ss_pred CCceeE--Eecc-CCCCEEEEEECCCCcEEEE-EcCCCeEEEEEcCC--CcEE--EEeeccCC-----CCEEEEEEcCCC
Q psy519 167 DGASVR--VFSD-HVSPVLSIAFSPCGKYLAS-GGEDGLVLTHELTT--GRVI--SRFHLQEH-----EPVTSLVWSVTG 233 (351)
Q Consensus 167 ~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~~--~~~~~~~~-----~~v~~~~~~~~~ 233 (351)
+++... .+.. ....+..++|+|||+++++ ...++.+.+|++.. ++.. ..+..... ..+..++|+|+|
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 454322 2222 2336788999999996665 56688999999874 4432 22221111 348899999999
Q ss_pred CEEE-EEeCCCeEEEEeCCCC---ceeeee-----ecceeEEecCCceeeeeeccceeeEEEee--eceeCceEEEee
Q psy519 234 ETLV-TGSLTGTVQFYGWPSA---SKIGIG-----VYPRCAAQPVGFEAATLAANSRVRTLREM--HEIVGPVVVVES 300 (351)
Q Consensus 234 ~~l~-~~~~dg~i~i~~~~~~---~~~~~~-----~~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~ 300 (351)
++|+ +...++.|.+|++... +.+... ....++|+|+|+.++++..+.. .+.+| +..+|+...+..
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~--~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD--NATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT--EEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC--cEEEEEEeCCCCeEEeccc
Confidence 9874 5556899999999732 233221 3467999999998888776532 35555 556677555443
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=2.2e-23 Score=178.68 Aligned_cols=237 Identities=13% Similarity=0.067 Sum_probs=183.7
Q ss_pred ceEEeeecCCccccEE-EEecCCCceEEEecCCc-----c-CC----CccceEEEEECCCCcE-EEEe------------
Q psy519 13 HFIQNSFKPETVEDVL-ANLESQKNLQSRYLPYY-----T-SG----HDMTVWSVEACSKGLA-LTGS------------ 68 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l-~~~~~~~~i~i~~~~~~-----~-~~----~~~~i~~~~~~~~~~~-~~~~------------ 68 (351)
.+..++|+|+ ++++ +++..++.|.+||+.+. . .. |...+..++|+|+|++ +++.
T Consensus 35 ~~~~~~~s~d--g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 35 TPMVPMVAPG--GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCCEEECTT--SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CccceEEcCC--CCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccc
Confidence 4778999999 9765 55566789999999876 1 11 1236778999999976 5554
Q ss_pred CCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEE
Q psy519 69 RDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYL 148 (351)
Q Consensus 69 ~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 148 (351)
.++.|.+||+.+++.+..+.. ...+.+++|+|++++++++ ++.|++||+.+++....+..+... ..+.|+|++..+
T Consensus 113 ~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l 188 (337)
T 1pby_B 113 QPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAV 188 (337)
T ss_dssp CCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCC
T ss_pred cCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEE
Confidence 579999999999888777764 4457889999999988887 689999999999887776543311 123789999877
Q ss_pred EEEecCCCCC-----------------------eEEEEEccCCcee-EEeccCCCCEEEEEECCCCcEEEEEcCCCeEEE
Q psy519 149 ASGGTGSYDK-----------------------AVRLWSITDGASV-RVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLT 204 (351)
Q Consensus 149 ~~~~~~~~d~-----------------------~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 204 (351)
+..... ++ .|.+||+++++.. ..+..+...+..++|+|++++++++ ++.|.+
T Consensus 189 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~ 264 (337)
T 1pby_B 189 WNQHES--SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLES 264 (337)
T ss_dssp CCCCTT--TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEE
T ss_pred eeeccC--CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEE
Confidence 655431 22 4789999988764 2234556678899999999999988 789999
Q ss_pred EEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeec
Q psy519 205 HELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGVY 261 (351)
Q Consensus 205 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~ 261 (351)
||+.+++.+..+.. ...+.+++|+|++++|++++.++.|.+||+.+++.+.....
T Consensus 265 ~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 265 FDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EETTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred EECCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 99999988877653 35678999999999999998899999999999887765443
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.2e-22 Score=175.14 Aligned_cols=240 Identities=12% Similarity=0.091 Sum_probs=168.6
Q ss_pred cceEEeeecCCccccEEEEecC---CCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEe-CCCcEEEEeCC
Q psy519 12 KHFIQNSFKPETVEDVLANLES---QKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGS-RDTTARLWSLE 79 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~---~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~-~d~~i~vw~~~ 79 (351)
..+..++|+|+ |+ |++++. ++.|.+|++... ...+...+..++|+|+|++ ++++ .++.+.+|++.
T Consensus 40 ~~p~~~a~spd--g~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 40 QNPTYLALSAK--DC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp SCCCCEEECTT--CE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCcceEEEccC--Ce-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 45667999999 99 554443 689999999654 2335677889999999986 6665 68999999996
Q ss_pred -CC--eeeEEeeC---------CCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCC-CCceeE--Eecc-CCCCeEEEEEcc
Q psy519 80 -QM--YPLRIFVG---------HKQDVTCARFHPKITYIGTGSYDKAVRLWSIT-DGASVR--VFSD-HVSPVLSIAFSP 143 (351)
Q Consensus 80 -~~--~~~~~~~~---------~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~--~~~~-~~~~i~~~~~~~ 143 (351)
++ +.+..+.. +...+.+++|+|+++++++...++.|++|++. +++... .+.. ....+..++|+|
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp 196 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP 196 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC
Confidence 22 23333322 12348889999999966666678899999998 454322 1222 234678899999
Q ss_pred CCCEEEEEecCCCCCeEEEEEccC--Cce--eEEeccCC------CCEEEEEECCCCcEEE-EEcCCCeEEEEEcCCC--
Q psy519 144 CGKYLASGGTGSYDKAVRLWSITD--GAS--VRVFSDHV------SPVLSIAFSPCGKYLA-SGGEDGLVLTHELTTG-- 210 (351)
Q Consensus 144 ~~~~l~~~~~~~~d~~i~i~d~~~--~~~--~~~~~~~~------~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~-- 210 (351)
+|+++++++.. ++.+.+|++.. ++. +..+.... ..+..++|+|||++|+ +...++.|.+|++...
T Consensus 197 dg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 197 DGQYAFLAGEL--SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp TSSEEEEEETT--TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCEEEEEeCC--CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 99977765432 78999999874 432 22232222 3488899999999875 4556899999999732
Q ss_pred -cEEEEeeccCCCCEEEEEEcCCCCEEEEEeC-CCeEEEE--eCCCCceee
Q psy519 211 -RVISRFHLQEHEPVTSLVWSVTGETLVTGSL-TGTVQFY--GWPSASKIG 257 (351)
Q Consensus 211 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~--~~~~~~~~~ 257 (351)
+.+..+. .+...+..++|+|+|++|++++. ++.|.+| |..+++...
T Consensus 275 ~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 275 LTLIQQIS-TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEEEEE-CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEeEEEe-cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 3333333 22346789999999999888776 4899999 555666553
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=6.9e-24 Score=188.00 Aligned_cols=234 Identities=13% Similarity=0.109 Sum_probs=174.0
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc--------------------cCCCccceEEEEECCCCcE-E----
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--------------------TSGHDMTVWSVEACSKGLA-L---- 65 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--------------------~~~~~~~i~~~~~~~~~~~-~---- 65 (351)
...+..++++|+ +.++++++.++ +++|+.... ...+...|.+++|+|+|++ +
T Consensus 36 ~~~~n~lavs~~--~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNK--YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETT--TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCccEEEEecC--CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 346788999999 99999998887 888765321 1124457999999999987 5
Q ss_pred EEeCCCcEEEEeCCCC--------e---eeEEeeCCCCCeEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCceeEEeccCC
Q psy519 66 TGSRDTTARLWSLEQM--------Y---PLRIFVGHKQDVTCARFHPK-ITYIGTGSYDKAVRLWSITDGASVRVFSDHV 133 (351)
Q Consensus 66 ~~~~d~~i~vw~~~~~--------~---~~~~~~~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 133 (351)
+++.|+.|++||+.++ + ....+.+|...|.+++|+|+ +.+|++++.||+|++||++++.......+|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 6788999999998654 2 24556679999999999997 7899999999999999999987776666788
Q ss_pred CCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccC-------CCCEEEEEECCCCcEEEEEc-CCC-----
Q psy519 134 SPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDH-------VSPVLSIAFSPCGKYLASGG-EDG----- 200 (351)
Q Consensus 134 ~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~-~dg----- 200 (351)
..|.+++|+|+|++|++|+. |+.|++||++ ++....+..+ ...+.+++|++++.++++.+ .+|
T Consensus 193 ~~v~~v~wspdg~~lasgs~---dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQ---NGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp GCEEEEEECTTSSCEEEEET---TSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CceeEEEEcCCCCEEEEEcC---CCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 99999999999999999998 9999999998 5555555433 23789999999888776533 343
Q ss_pred -eEEEEEcCCCc-----EEEEeec------cCCCCEEEEEEcCCCCEEEEEeC-CCeEEEEeCC
Q psy519 201 -LVLTHELTTGR-----VISRFHL------QEHEPVTSLVWSVTGETLVTGSL-TGTVQFYGWP 251 (351)
Q Consensus 201 -~i~i~d~~~~~-----~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~~~~ 251 (351)
.+++|+++... ....+.. ....+-..+.+-++.+++++++. .+.|.+....
T Consensus 269 ~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 269 PDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp CEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred CceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 38999998642 1111110 01112223444467777766554 5667777654
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.92 E-value=3.8e-24 Score=202.27 Aligned_cols=257 Identities=9% Similarity=0.001 Sum_probs=180.1
Q ss_pred EEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCcc---ceEEEEECCCCcE-EEEeC---------CCcEEEE
Q psy519 15 IQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDM---TVWSVEACSKGLA-LTGSR---------DTTARLW 76 (351)
Q Consensus 15 ~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~---~i~~~~~~~~~~~-~~~~~---------d~~i~vw 76 (351)
..++|+|+ |++++++ .++.|++|++.++ ...|.. .+.+++|+|||++ ++++. ++.|++|
T Consensus 19 ~~~~~s~d--g~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 19 FFPNWISG--QEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCEESSS--SEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CccEECCC--CeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 37899999 9766654 6899999999887 223333 3889999999987 66654 6899999
Q ss_pred eCCCCeee--EEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe-ccCCCCe-----------------
Q psy519 77 SLEQMYPL--RIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF-SDHVSPV----------------- 136 (351)
Q Consensus 77 ~~~~~~~~--~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i----------------- 136 (351)
|+.+++.+ ..+ ...+..++|+|||+.|+++. ++.|++||+.+++..... .++...+
T Consensus 96 d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 96 DLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp ETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred ECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 99998763 222 24688899999999999886 789999999888765433 2222222
Q ss_pred EEEEEccCCCEEEEEecCC-------------------------------CCCeEEEEEccCCcee---E-----EeccC
Q psy519 137 LSIAFSPCGKYLASGGTGS-------------------------------YDKAVRLWSITDGASV---R-----VFSDH 177 (351)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~-------------------------------~d~~i~i~d~~~~~~~---~-----~~~~~ 177 (351)
.+++|+|||++|++++... ....|++||+.+++.. . .+..|
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 4799999999999887510 0117899999887642 1 12357
Q ss_pred CCCEEEEEECCCCcEEEEEcCC----CeEEEEE----cCCCcEEEEee---ccCCCCEE-----EEEEcCCCCEEEE--E
Q psy519 178 VSPVLSIAFSPCGKYLASGGED----GLVLTHE----LTTGRVISRFH---LQEHEPVT-----SLVWSVTGETLVT--G 239 (351)
Q Consensus 178 ~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~---~~~~~~v~-----~~~~~~~~~~l~~--~ 239 (351)
...+..++|+||++++++.... ..|.+|| +.+++....+. ..+...+. .+.|+|||+.|+. .
T Consensus 252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 331 (719)
T 1z68_A 252 DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS 331 (719)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEE
T ss_pred cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEE
Confidence 7789999999998877764432 2488899 77765443331 23344455 7899999996554 4
Q ss_pred eCCC--eEEEEeCCCCceeee----eecceeEEecCCceeeeeecc
Q psy519 240 SLTG--TVQFYGWPSASKIGI----GVYPRCAAQPVGFEAATLAAN 279 (351)
Q Consensus 240 ~~dg--~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~ 279 (351)
..+| .|.+|++.+++.... ..+..+.++ ++..++..+..
T Consensus 332 ~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 332 DKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp CTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred ccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 3455 677788877664332 123345666 88877777765
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=4.7e-21 Score=166.17 Aligned_cols=266 Identities=12% Similarity=0.100 Sum_probs=179.1
Q ss_pred ccEEEEec----CCCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCC----CcEEEEeCCC--Ce--ee
Q psy519 25 EDVLANLE----SQKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRD----TTARLWSLEQ--MY--PL 84 (351)
Q Consensus 25 ~~~l~~~~----~~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d----~~i~vw~~~~--~~--~~ 84 (351)
..+++.|+ .++.|.+|.++.. ...+...+..++|+|+|++ ++++.+ +.+.+|++.. ++ .+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 45666663 3568999987542 1115667778999999986 666664 7999998865 43 33
Q ss_pred EEeeCCCCCeEEEEEeCCCCEEEEEe-CCCcEEEEeCCCCceeEEe------cc--------CCCCeEEEEEccCCCEEE
Q psy519 85 RIFVGHKQDVTCARFHPKITYIGTGS-YDKAVRLWSITDGASVRVF------SD--------HVSPVLSIAFSPCGKYLA 149 (351)
Q Consensus 85 ~~~~~~~~~i~~i~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~------~~--------~~~~i~~~~~~~~~~~l~ 149 (351)
.....+......+++ +++++++++ .++.+.+|++.....+..+ .+ +...+.+++|+|+|++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 334445566777888 788777766 5789999999754332211 11 123458899999999777
Q ss_pred EEecCCCCCeEEEEEccCCce------e-------EEeccCCCCEEEEEECCCCcEEEEEc-CCCeEEEEEcCCCcEE--
Q psy519 150 SGGTGSYDKAVRLWSITDGAS------V-------RVFSDHVSPVLSIAFSPCGKYLASGG-EDGLVLTHELTTGRVI-- 213 (351)
Q Consensus 150 ~~~~~~~d~~i~i~d~~~~~~------~-------~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~-- 213 (351)
++..+ ++.|.+|++..... + .........+..++|+|||+++++++ .++.|.+||+.+++..
T Consensus 171 ~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 171 ADDLG--TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEI 248 (361)
T ss_dssp EEETT--TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEE
T ss_pred EEeCC--CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEe
Confidence 66542 78999999875431 1 11223455678999999999887776 6899999999877542
Q ss_pred EEeec--cCCCCEEEEEEcCCCCEEEEEeCC--CeEEEEeCC--CCce--eeee----ecceeEEecCCceeeeeecc-c
Q psy519 214 SRFHL--QEHEPVTSLVWSVTGETLVTGSLT--GTVQFYGWP--SASK--IGIG----VYPRCAAQPVGFEAATLAAN-S 280 (351)
Q Consensus 214 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~~~~--~~~~--~~~~----~~~~~~~s~~~~~~~~~~~~-~ 280 (351)
..+.. .+...+..++|+|||++|+++..+ +.|.+|++. +++. +... ....++|+|+|++++++..+ +
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~ 328 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTN 328 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTT
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCC
Confidence 22221 122457899999999998776654 899999996 4443 2221 45679999999988887744 3
Q ss_pred eeeEEEeeeceeCce
Q psy519 281 RVRTLREMHEIVGPV 295 (351)
Q Consensus 281 ~~~~~~~~~~~~g~~ 295 (351)
.+..+ .++..+|..
T Consensus 329 ~v~v~-~~d~~~g~~ 342 (361)
T 3scy_A 329 VIQIF-ERDQATGLL 342 (361)
T ss_dssp EEEEE-EECTTTCCE
T ss_pred CEEEE-EEECCCCcE
Confidence 33222 245556663
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=1.8e-21 Score=168.82 Aligned_cols=240 Identities=13% Similarity=0.111 Sum_probs=167.2
Q ss_pred CccceEEeeecCCccccEEEEecCC----CceEEEecCCc---------cCCCccceEEEEECCCCcE-EE-EeCCCcEE
Q psy519 10 DHKHFIQNSFKPETVEDVLANLESQ----KNLQSRYLPYY---------TSGHDMTVWSVEACSKGLA-LT-GSRDTTAR 74 (351)
Q Consensus 10 ~~~~v~~~~~sp~~~~~~l~~~~~~----~~i~i~~~~~~---------~~~~~~~i~~~~~~~~~~~-~~-~~~d~~i~ 74 (351)
+...+..++|+|+ |++|++++.+ +.|.+|++... ...+......+++ ++++ ++ ...++.+.
T Consensus 48 ~~~~p~~l~~spd--g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSAD--GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSIT 123 (361)
T ss_dssp ECSCCCSEEECTT--SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEE
T ss_pred cCCCCceEEECCC--CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEE
Confidence 3455667899999 9999888775 79999988652 2224456677787 6654 44 44688999
Q ss_pred EEeCCCCeeeEEe------eC--------CCCCeEEEEEeCCCCEEEEEe-CCCcEEEEeCCCCce------e-------
Q psy519 75 LWSLEQMYPLRIF------VG--------HKQDVTCARFHPKITYIGTGS-YDKAVRLWSITDGAS------V------- 126 (351)
Q Consensus 75 vw~~~~~~~~~~~------~~--------~~~~i~~i~~~~~~~~l~~~~-~dg~i~i~d~~~~~~------~------- 126 (351)
+|++.....+..+ .+ +...+.+++|+|+++++++++ .++.+.+|++..... +
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~ 203 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE 203 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc
Confidence 9999754322111 11 123457899999999776655 478999998875431 1
Q ss_pred EEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCce--eEEec---cCCCCEEEEEECCCCcEEEEEcCC--
Q psy519 127 RVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGAS--VRVFS---DHVSPVLSIAFSPCGKYLASGGED-- 199 (351)
Q Consensus 127 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~--~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d-- 199 (351)
............++|+|+|++++++... ++.|.+||+.+++. +..+. .+......++|+|||++|+++..+
T Consensus 204 ~~~~~~~~~~~~~~~spdg~~l~v~~~~--~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 204 AFKVAPGSGPRHLIFNSDGKFAYLINEI--GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETT--TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred ceecCCCCCCeEEEEcCCCCEEEEEcCC--CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 1122345667899999999988877631 88999999987743 22222 233457899999999998776654
Q ss_pred CeEEEEEcC--CCc--EEEEeeccCCCCEEEEEEcCCCCEEEEEe-CCCeEEEEe--CCCCceee
Q psy519 200 GLVLTHELT--TGR--VISRFHLQEHEPVTSLVWSVTGETLVTGS-LTGTVQFYG--WPSASKIG 257 (351)
Q Consensus 200 g~i~i~d~~--~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~~--~~~~~~~~ 257 (351)
+.|.+|++. +++ .+..+. ....+..++|+|+|++|++++ .++.|.+|+ ..+++...
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~--~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQL--TGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEE--CSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CEEEEEEEcCCCCcEEEeeEec--CCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 899999985 444 333333 245678999999999988887 578999964 45665543
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=5.2e-22 Score=173.78 Aligned_cols=260 Identities=10% Similarity=-0.005 Sum_probs=182.1
Q ss_pred eeecCCccccEEEEecC-CCc--eEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEe
Q psy519 17 NSFKPETVEDVLANLES-QKN--LQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIF 87 (351)
Q Consensus 17 ~~~sp~~~~~~l~~~~~-~~~--i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~ 87 (351)
.+|||| |++|++++. ++. |.+|++... ..++...+..+.|+|+|+. +.++.++.+++||+.+++....+
T Consensus 41 ~~~SpD--g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 41 KCFTRD--GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY 118 (388)
T ss_dssp CCBCTT--SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ccCCCC--CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee
Confidence 889999 999998877 664 777788766 3445555556789999987 78888899999999999877766
Q ss_pred eCCCCCeEEEE--EeCCCCEEEEE----------------------eCCCcEEEEeCCCCceeEEeccCCCCeEEEEEcc
Q psy519 88 VGHKQDVTCAR--FHPKITYIGTG----------------------SYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSP 143 (351)
Q Consensus 88 ~~~~~~i~~i~--~~~~~~~l~~~----------------------~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 143 (351)
..+...+.... ++|++++++.. ..+..|++||+.+++..... .+...+..++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp 197 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRP 197 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEET
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECC
Confidence 66665554444 48999988742 23478999999988754444 4567789999999
Q ss_pred -CCCEEEEEecCCC---CCeEEEEEccCCceeEEeccCC--CCEEEEEECCCCcEEEEEcC-CC----eEEEEEcCCCcE
Q psy519 144 -CGKYLASGGTGSY---DKAVRLWSITDGASVRVFSDHV--SPVLSIAFSPCGKYLASGGE-DG----LVLTHELTTGRV 212 (351)
Q Consensus 144 -~~~~l~~~~~~~~---d~~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~ 212 (351)
+|+.|+....... ...|.++|+..++ ...+..+. ..+..+.|+|||+.|+..+. ++ .|++||+.+++.
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 9999988765211 2378888876554 34444443 24778899999997765443 22 399999998875
Q ss_pred EEEeeccCCC----CEEEEEEcCCCCEEEEE---------eCCCeEEEEeCCCCceeeee---------------eccee
Q psy519 213 ISRFHLQEHE----PVTSLVWSVTGETLVTG---------SLTGTVQFYGWPSASKIGIG---------------VYPRC 264 (351)
Q Consensus 213 ~~~~~~~~~~----~v~~~~~~~~~~~l~~~---------~~dg~i~i~~~~~~~~~~~~---------------~~~~~ 264 (351)
.......... ....+.|+|||+.|+.. ..+..|++||+.+++..... ....+
T Consensus 277 ~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 356 (388)
T 3pe7_A 277 RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHP 356 (388)
T ss_dssp EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCC
T ss_pred EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCc
Confidence 4332222100 01223799999988754 45679999999988764431 25677
Q ss_pred EEecCCceeeeeeccc
Q psy519 265 AAQPVGFEAATLAANS 280 (351)
Q Consensus 265 ~~s~~~~~~~~~~~~~ 280 (351)
+|+|||+.++..+...
T Consensus 357 ~~spDg~~l~~~s~~~ 372 (388)
T 3pe7_A 357 SFTPDDKQILFTSDVH 372 (388)
T ss_dssp EECTTSSEEEEEECTT
T ss_pred cCCCCCCEEEEEecCC
Confidence 9999999888776543
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.5e-23 Score=185.79 Aligned_cols=212 Identities=15% Similarity=0.162 Sum_probs=163.0
Q ss_pred CceEEEecCCccCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC----------eeeE-----EeeCCCCCeEEEE
Q psy519 35 KNLQSRYLPYYTSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM----------YPLR-----IFVGHKQDVTCAR 98 (351)
Q Consensus 35 ~~i~i~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~----------~~~~-----~~~~~~~~i~~i~ 98 (351)
+.+++|+.... .....++.+++++++.+ ++++.++ +++|+.... ..+. ....+...|.+++
T Consensus 23 ~~vri~~~~~~--~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 99 (434)
T 2oit_A 23 KKVRIFDSPEE--LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLA 99 (434)
T ss_dssp CEEECSCCCSS--CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEE
T ss_pred eeEEecCCccc--cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEE
Confidence 46888765432 23446788999998877 7777777 899875311 0111 1123566799999
Q ss_pred EeCCCCEEE----EEeCCCcEEEEeCCCC--------ce---eEEeccCCCCeEEEEEccC-CCEEEEEecCCCCCeEEE
Q psy519 99 FHPKITYIG----TGSYDKAVRLWSITDG--------AS---VRVFSDHVSPVLSIAFSPC-GKYLASGGTGSYDKAVRL 162 (351)
Q Consensus 99 ~~~~~~~l~----~~~~dg~i~i~d~~~~--------~~---~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~d~~i~i 162 (351)
|+|++++|+ +++.|+.|++||++++ +. ...+.+|...|.+++|+|+ +++|++++. |+.|++
T Consensus 100 ~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~---Dg~v~i 176 (434)
T 2oit_A 100 LSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA---DGSIAV 176 (434)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET---TSCEEE
T ss_pred EcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC---CCeEEE
Confidence 999999999 7888999999998754 22 3455678999999999997 889999998 999999
Q ss_pred EEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC------CCCEEEEEEcCCCCEE
Q psy519 163 WSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQE------HEPVTSLVWSVTGETL 236 (351)
Q Consensus 163 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l 236 (351)
||++++........|...+.+++|+|+|++|++|+.||.|++||++ ++....+.... ...+.+++|++++.++
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 9999987766666788899999999999999999999999999998 55555443221 1278999999988877
Q ss_pred EE-EeCCC------eEEEEeCCCC
Q psy519 237 VT-GSLTG------TVQFYGWPSA 253 (351)
Q Consensus 237 ~~-~~~dg------~i~i~~~~~~ 253 (351)
++ .+.|| .+++|+++..
T Consensus 256 ~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 256 IVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEccCCCccCCCCceEEEEeccC
Confidence 55 33443 3899999865
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=4.1e-23 Score=195.24 Aligned_cols=278 Identities=9% Similarity=-0.016 Sum_probs=194.7
Q ss_pred eEEeeecCCccccEEEEecC---------CCceEEEecCCc-c---CCCccceEEEEECCCCcEEEEeCCCcEEEEeCCC
Q psy519 14 FIQNSFKPETVEDVLANLES---------QKNLQSRYLPYY-T---SGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQ 80 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~~~---------~~~i~i~~~~~~-~---~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~ 80 (351)
+.+++|||| |++|++++. ++.|++|++.++ . ......+..++|+|||+.++...++.|++|++.+
T Consensus 62 ~~~~~~SpD--g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~ 139 (719)
T 1z68_A 62 ASNYGLSPD--RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPG 139 (719)
T ss_dssp CSEEEECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTT
T ss_pred eeeEEECCC--CCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCC
Confidence 889999999 999998876 689999999876 2 3344678899999999884444688999999998
Q ss_pred CeeeEEe-eCCCCCe-----------------EEEEEeCCCCEEEEEeCCC-----------------------------
Q psy519 81 MYPLRIF-VGHKQDV-----------------TCARFHPKITYIGTGSYDK----------------------------- 113 (351)
Q Consensus 81 ~~~~~~~-~~~~~~i-----------------~~i~~~~~~~~l~~~~~dg----------------------------- 113 (351)
++..... .++...+ .+++|+|||+.|++++.|.
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 8765433 2222222 4899999999999887552
Q ss_pred -----cEEEEeCCCCcee---E-----EeccCCCCeEEEEEccCCCEEEEEec-CCCCCeEEEEE----ccCCceeEEe-
Q psy519 114 -----AVRLWSITDGASV---R-----VFSDHVSPVLSIAFSPCGKYLASGGT-GSYDKAVRLWS----ITDGASVRVF- 174 (351)
Q Consensus 114 -----~i~i~d~~~~~~~---~-----~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~d~~i~i~d----~~~~~~~~~~- 174 (351)
.|++||+.+++.. . .+.++...+..++|+||++++++... ......|.+|| +.+++....+
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~ 299 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE 299 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEe
Confidence 7889999887653 1 23357778999999999877666432 11123588999 7776554433
Q ss_pred ---ccCCCCEE-----EEEECCCCcEEEE--EcCCC--eEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCC
Q psy519 175 ---SDHVSPVL-----SIAFSPCGKYLAS--GGEDG--LVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLT 242 (351)
Q Consensus 175 ---~~~~~~i~-----~~~~~~~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 242 (351)
..|...+. .+.|+|||+.++. ...+| .|.+||+.+++ ...+. .+...+..+.++ +++.|+..+.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt-~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 300 HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQIT-SGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECS-CSSSCEEEEEEE-CSSEEEEEESC
T ss_pred cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecc-cCceEEEEEEEE-eCCEEEEEEec
Confidence 35555555 7899999986554 44455 57778887766 33343 344567777777 88877766654
Q ss_pred -----CeEEEEeCCC--Cc--eeee--------eecceeEEecCCceeeeeeccceeeEEEeeeceeCceE
Q psy519 243 -----GTVQFYGWPS--AS--KIGI--------GVYPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 243 -----g~i~i~~~~~--~~--~~~~--------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 296 (351)
+..++|.+.. +. .... ..+....|+|++..++...++...-.+.+|+..+|+..
T Consensus 377 ~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~ 447 (719)
T 1z68_A 377 FEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEI 447 (719)
T ss_dssp GGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEE
T ss_pred CCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEE
Confidence 7888888754 32 1111 23456889999998887665554446778887777643
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=1.1e-21 Score=169.01 Aligned_cols=229 Identities=13% Similarity=0.027 Sum_probs=173.3
Q ss_pred EEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCC-CCeEEEEEeCCCCEEE-EEeCCCcEEEEeCCCCceeEEecc
Q psy519 55 SVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHK-QDVTCARFHPKITYIG-TGSYDKAVRLWSITDGASVRVFSD 131 (351)
Q Consensus 55 ~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~ 131 (351)
.+++++++.+ ++++.++.|++||+.+++.+..+..+. ..+..++|+|+++.++ +...++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 3567788877 899999999999999999888776543 2577899999998665 455689999999999988776653
Q ss_pred CC------CCeEEEEEccCCCEEEEEecCCCC------------CeEEEEEccCCc---eeEEeccCCCCEEEEEECCCC
Q psy519 132 HV------SPVLSIAFSPCGKYLASGGTGSYD------------KAVRLWSITDGA---SVRVFSDHVSPVLSIAFSPCG 190 (351)
Q Consensus 132 ~~------~~i~~~~~~~~~~~l~~~~~~~~d------------~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~ 190 (351)
.. ..+.+++|+|+|++++++.. + +.|.+||+.+++ .+..+.. ...+.+++|+|+|
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg 159 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVN---PTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDG 159 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEE---EEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTS
T ss_pred ccccccccccccceEECCCCCEEEEEcc---cccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCC
Confidence 22 23678999999999999885 5 899999998843 3334433 3357889999999
Q ss_pred cEEEEEcCCCeEEEEEcCCCcEEEEeeccC--------------------------------------------------
Q psy519 191 KYLASGGEDGLVLTHELTTGRVISRFHLQE-------------------------------------------------- 220 (351)
Q Consensus 191 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------------------------------------------- 220 (351)
+ +++++. .|.+||+.+++....+....
T Consensus 160 ~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 666544 49999999888776654321
Q ss_pred -----------------CCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeee----ecceeEEecCCceeeeeec
Q psy519 221 -----------------HEPVTSLVWSV-TGETLVTGSLTGTVQFYGWPSASKIGIG----VYPRCAAQPVGFEAATLAA 278 (351)
Q Consensus 221 -----------------~~~v~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~ 278 (351)
...+..++|+| ++++++++ ++.|.+||+.+++.+... ....++|+|++..+++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 314 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGT 314 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESB
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecC
Confidence 01345677889 99988888 789999999988776542 3567899999988877533
Q ss_pred cceeeEEEeeeceeCce
Q psy519 279 NSRVRTLREMHEIVGPV 295 (351)
Q Consensus 279 ~~~~~~~~~~~~~~g~~ 295 (351)
+ ..+.+|+..+++.
T Consensus 315 ~---~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 315 F---NDLAVFNPDTLEK 328 (349)
T ss_dssp S---SEEEEEETTTTEE
T ss_pred C---CeEEEEeccccce
Confidence 3 5778888777763
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=1.1e-21 Score=171.66 Aligned_cols=258 Identities=12% Similarity=-0.012 Sum_probs=179.7
Q ss_pred EEECCCCcE-EEEeC-CC--cEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEecc
Q psy519 56 VEACSKGLA-LTGSR-DT--TARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSD 131 (351)
Q Consensus 56 ~~~~~~~~~-~~~~~-d~--~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 131 (351)
.+|+|||+. +.++. ++ .|.+||+.+++......++...+..+.|+||++.|+.++.++.+++||+.+++.......
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 789999986 66665 66 488899999988776666666665678999999999999999999999999887766665
Q ss_pred CCCCeEEEE--EccCCCEEEEEec-------------------CCCCCeEEEEEccCCceeEEeccCCCCEEEEEECC-C
Q psy519 132 HVSPVLSIA--FSPCGKYLASGGT-------------------GSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSP-C 189 (351)
Q Consensus 132 ~~~~i~~~~--~~~~~~~l~~~~~-------------------~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~ 189 (351)
+...+.... ++|++.+++.... ...+..|.+||+.+++... +..+...+..+.|+| |
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~d 199 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYD 199 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTE
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCC
Confidence 555454443 4899998875321 1125789999999886544 445566789999999 9
Q ss_pred CcEEEEEcCC------CeEEEEEcCCCcEEEEeeccCC-CCEEEEEEcCCCCEEEEEeC-CC----eEEEEeCCCCceee
Q psy519 190 GKYLASGGED------GLVLTHELTTGRVISRFHLQEH-EPVTSLVWSVTGETLVTGSL-TG----TVQFYGWPSASKIG 257 (351)
Q Consensus 190 ~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-dg----~i~i~~~~~~~~~~ 257 (351)
|+.|+....+ ..|.++|+..++. ..+..... ..+..+.|+|||+.|+..+. ++ .|++||+.+++...
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (388)
T 3pe7_A 200 DSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ 278 (388)
T ss_dssp EEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE
Confidence 9988877653 3788888765543 33322221 35778999999997765443 22 39999999987544
Q ss_pred eee----------cceeEEecCCceeeeeecc------ceeeEEEeeeceeCceEEEeeEE----------------EEe
Q psy519 258 IGV----------YPRCAAQPVGFEAATLAAN------SRVRTLREMHEIVGPVVVVESFI----------------VEI 305 (351)
Q Consensus 258 ~~~----------~~~~~~s~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~----------------~~~ 305 (351)
... .....|+|+|+.+++...+ .....+.+|+..+++...+.... ..|
T Consensus 279 l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 358 (388)
T 3pe7_A 279 LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSF 358 (388)
T ss_dssp EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEE
T ss_pred EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccC
Confidence 322 2335799999998876543 34557888888777655444322 378
Q ss_pred cCCceeeccE
Q psy519 306 RPDKWYEANL 315 (351)
Q Consensus 306 ~~~~~~~~~~ 315 (351)
+||+.++...
T Consensus 359 spDg~~l~~~ 368 (388)
T 3pe7_A 359 TPDDKQILFT 368 (388)
T ss_dssp CTTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 8998765433
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=2e-21 Score=183.97 Aligned_cols=262 Identities=7% Similarity=0.011 Sum_probs=181.4
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCcc-----ceEEEEECCCCcE-EEEeCC---------
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDM-----TVWSVEACSKGLA-LTGSRD--------- 70 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~-----~i~~~~~~~~~~~-~~~~~d--------- 70 (351)
......++|+|+ |++++++ ++.|++|++.++ +.+|.. ....+.|+|||+. +.++.+
T Consensus 16 ~~~~~~~~w~~d--g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 16 RLKLYSLRWISD--HEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCCEEECSS--SEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred cccccccEECCC--CcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 345678999999 9999886 899999999877 334432 2345889999987 555554
Q ss_pred CcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe-ccCCCCe-------------
Q psy519 71 TTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF-SDHVSPV------------- 136 (351)
Q Consensus 71 ~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i------------- 136 (351)
+.+.+||+++++.. .+..+...+...+|||||+.|+.+. ++.|++||+.+++..+.. .++...+
T Consensus 92 ~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 92 ASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred eEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 66789999998755 4566778899999999999999885 789999999887755432 2222222
Q ss_pred ----EEEEEccCCCEEEEEecCC---------------------------------CCCeEEEEEccC---Cc--eeEEe
Q psy519 137 ----LSIAFSPCGKYLASGGTGS---------------------------------YDKAVRLWSITD---GA--SVRVF 174 (351)
Q Consensus 137 ----~~~~~~~~~~~l~~~~~~~---------------------------------~d~~i~i~d~~~---~~--~~~~~ 174 (351)
..+.|||||+.|+.+.... ....|++||+.+ ++ ....+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 3589999999999875310 011588899988 73 23334
Q ss_pred c------cCCCCEEEEEECCCCcEEEEEcC----CCeEEEEEcCCCc----EE---EEeeccCCCCE-----EEEEEcCC
Q psy519 175 S------DHVSPVLSIAFSPCGKYLASGGE----DGLVLTHELTTGR----VI---SRFHLQEHEPV-----TSLVWSVT 232 (351)
Q Consensus 175 ~------~~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~----~~---~~~~~~~~~~v-----~~~~~~~~ 232 (351)
. .+...+..++|+|||+.++.... +..|.+||+.+++ +. ..+...+...+ ..+.|+||
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 3 26777899999999997665432 3479999998887 21 11112233333 37899999
Q ss_pred CCEEE-EEeC-C--CeEEEEeCCCCceeeee----ecceeEEecCCceeeeeecc
Q psy519 233 GETLV-TGSL-T--GTVQFYGWPSASKIGIG----VYPRCAAQPVGFEAATLAAN 279 (351)
Q Consensus 233 ~~~l~-~~~~-d--g~i~i~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~~ 279 (351)
|+.|+ ..+. + ..|++|+..+++..... .+.. .+.+++..++..+..
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~-~~~~d~~~i~f~~~~ 383 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIG-IEALTSDYLYYISNE 383 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEE-EEEECSSEEEEEESC
T ss_pred CCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEE-EEEEeCCEEEEEEec
Confidence 99877 6654 3 46888898877655432 1112 234667776666654
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=4.8e-21 Score=166.40 Aligned_cols=237 Identities=14% Similarity=0.125 Sum_probs=169.3
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecC-Cc----cCCCc--cceEEEEECCCCc--E-EEEe-------------
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLP-YY----TSGHD--MTVWSVEACSKGL--A-LTGS------------- 68 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~-~~----~~~~~--~~i~~~~~~~~~~--~-~~~~------------- 68 (351)
..+..++|+|+ |++|++++.+ .|.+|++. .+ ...+. +.+..++|+|+|+ + +++.
T Consensus 40 ~~~~~~a~spd--g~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 40 EPISWMTFDHE--RKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CCCSEEEECTT--SSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCcEEEECCC--CCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 46778999999 9999888777 89999986 43 11111 2345688999998 3 3442
Q ss_pred CCCcEEEEeCC-CCeeeEEee----CCCCCeEEEEEeCCCCEEEEEeC-CCcEEEEeCC-CCcee--EEec--cCCCCeE
Q psy519 69 RDTTARLWSLE-QMYPLRIFV----GHKQDVTCARFHPKITYIGTGSY-DKAVRLWSIT-DGASV--RVFS--DHVSPVL 137 (351)
Q Consensus 69 ~d~~i~vw~~~-~~~~~~~~~----~~~~~i~~i~~~~~~~~l~~~~~-dg~i~i~d~~-~~~~~--~~~~--~~~~~i~ 137 (351)
.++.+.+|++. +++....+. .+...+.+++|+|+|++++++.. ++.|++||+. +++.. ..+. .+...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68999999997 465443333 24567899999999998887654 6799999998 66643 2232 2356789
Q ss_pred EEEEccCCCEEEEEecCCCCCeEEEEEcc--CCcee---EEecc-------CCC------CEEEEE-ECCCCcEEEEEcC
Q psy519 138 SIAFSPCGKYLASGGTGSYDKAVRLWSIT--DGASV---RVFSD-------HVS------PVLSIA-FSPCGKYLASGGE 198 (351)
Q Consensus 138 ~~~~~~~~~~l~~~~~~~~d~~i~i~d~~--~~~~~---~~~~~-------~~~------~i~~~~-~~~~~~~l~~~~~ 198 (351)
.++|+|+|++++++... ++.|.+|++. +++.. ..+.. +.. .+..++ |+|||++|++++.
T Consensus 197 ~~~~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEA--GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred EeEECCCCCEEEEEECC--CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 99999999999887642 6899999875 45432 12211 121 478999 9999999887764
Q ss_pred CC------eEEEEEcC-CCcEEEEee-c-cCCCCEEEEEEcC---CCCEEEEEeCC-CeEEEEeCCCC
Q psy519 199 DG------LVLTHELT-TGRVISRFH-L-QEHEPVTSLVWSV---TGETLVTGSLT-GTVQFYGWPSA 253 (351)
Q Consensus 199 dg------~i~i~d~~-~~~~~~~~~-~-~~~~~v~~~~~~~---~~~~l~~~~~d-g~i~i~~~~~~ 253 (351)
+. .|.+|++. +++...... . .....+..++|+| +|++|++++.+ +.|.+|++...
T Consensus 275 ~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 32 89999996 565443211 1 2334567899999 89999998864 89999998765
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=2.6e-20 Score=161.79 Aligned_cols=238 Identities=10% Similarity=0.024 Sum_probs=165.6
Q ss_pred cceEEEEECCCCcE-EEEeCCCcEEEEeCC-CCeeeEEeeCC-CCCeEEEEEeCCCCE--EEEEe-------------CC
Q psy519 51 MTVWSVEACSKGLA-LTGSRDTTARLWSLE-QMYPLRIFVGH-KQDVTCARFHPKITY--IGTGS-------------YD 112 (351)
Q Consensus 51 ~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~-~~~~~~~~~~~-~~~i~~i~~~~~~~~--l~~~~-------------~d 112 (351)
..+..++|+|+|++ ++++.+ .|.+|++. +++........ ......++|+|++++ +++++ .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 46778999999986 677776 99999997 77654433211 123456889999994 44553 68
Q ss_pred CcEEEEeCC-CCceeEEec----cCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEcc-CCcee--EEec--cCCCCEE
Q psy519 113 KAVRLWSIT-DGASVRVFS----DHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSIT-DGASV--RVFS--DHVSPVL 182 (351)
Q Consensus 113 g~i~i~d~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~-~~~~~--~~~~--~~~~~i~ 182 (351)
+.+.+|++. .++....+. .+...+.+++|+|+|++++++..+ ++.|++||+. +++.. ..+. .+...+.
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~--~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT--ANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC--CCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 999999997 455543333 245678999999999998877542 6799999998 66543 2333 2356789
Q ss_pred EEEECCCCcEEEEEcC-CCeEEEEEcC--CCcEEE---Eee-ccCC----C-------CEEEEE-EcCCCCEEEEEeCC-
Q psy519 183 SIAFSPCGKYLASGGE-DGLVLTHELT--TGRVIS---RFH-LQEH----E-------PVTSLV-WSVTGETLVTGSLT- 242 (351)
Q Consensus 183 ~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~~---~~~-~~~~----~-------~v~~~~-~~~~~~~l~~~~~d- 242 (351)
.++|+|||+++++++. ++.+.+|++. +++... .+. .... . .+..++ |+|||++|++++.+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 9999999999887765 6899999765 455421 222 1111 1 488999 99999998876543
Q ss_pred C-----eEEEEeCC-CCceee----e----eecceeEEec---CCceeeeeeccceeeEEEeeeceeC
Q psy519 243 G-----TVQFYGWP-SASKIG----I----GVYPRCAAQP---VGFEAATLAANSRVRTLREMHEIVG 293 (351)
Q Consensus 243 g-----~i~i~~~~-~~~~~~----~----~~~~~~~~s~---~~~~~~~~~~~~~~~~~~~~~~~~g 293 (351)
+ .|.+|++. +++... . .....++|+| +|++++++..++ ..+++|+....
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~--~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE--GWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS--CEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCC--CeEEEEEEchh
Confidence 2 89999996 565442 1 1246789999 899988776542 34566654433
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.89 E-value=4.5e-19 Score=148.56 Aligned_cols=237 Identities=11% Similarity=0.119 Sum_probs=181.9
Q ss_pred CCCccceEEeeecCCccccEEEEecCCCceEEEecCCc----c------CCCccceEEEEE-CCCCcEEEEe-C-CCcEE
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----T------SGHDMTVWSVEA-CSKGLALTGS-R-DTTAR 74 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~------~~~~~~i~~~~~-~~~~~~~~~~-~-d~~i~ 74 (351)
.++-..+.+++++|+ +.++++...++.|.+|+.... . .++...+..+++ .+++.++.+. . ++.|.
T Consensus 26 ~g~~~~p~~v~~~~~--g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQ--NDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TTCBSCEEEEEECTT--CCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CCccCCCceEEECCC--CCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 345677899999999 998888888899999998754 1 234467899999 5788884444 3 89999
Q ss_pred EEeCCCCeeeEEee-CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEec--cCCCCeEEEEEccCCCEEEEE
Q psy519 75 LWSLEQMYPLRIFV-GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFS--DHVSPVLSIAFSPCGKYLASG 151 (351)
Q Consensus 75 vw~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~ 151 (351)
+|+ .+++.+..+. .+...+.+++++|+++++++...++.|.+||.. ++.+..+. .+...+.+++++|+|+++++.
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 999 5666666664 334578999999999988887778999999964 55555553 344568999999999877776
Q ss_pred ecCCCCCeEEEEEccCCceeEEeccC--CCCEEEEEECCCCcEEEEEcCCC-eEEEEEcCCCcEEEEeeccCC-CCEEEE
Q psy519 152 GTGSYDKAVRLWSITDGASVRVFSDH--VSPVLSIAFSPCGKYLASGGEDG-LVLTHELTTGRVISRFHLQEH-EPVTSL 227 (351)
Q Consensus 152 ~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~-~~v~~~ 227 (351)
.. ++.|++||. +++.+..+... ...+..++++|+|+++++...++ .|.+||. +++.+..+..... ..+.++
T Consensus 182 ~~---~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 182 NR---AHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDV 256 (286)
T ss_dssp GG---GTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEE
T ss_pred CC---CCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeE
Confidence 66 889999997 55666666433 35788999999999888888776 9999995 5666666654322 357899
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy519 228 VWSVTGETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 228 ~~~~~~~~l~~~~~dg~i~i~~~~~~~ 254 (351)
+++|+|+++++ +.|+.|++|++....
T Consensus 257 ~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred EECCCCcEEEE-CCCCeEEEEEccccc
Confidence 99999987766 579999999986543
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=1.3e-21 Score=171.55 Aligned_cols=259 Identities=12% Similarity=0.021 Sum_probs=178.8
Q ss_pred eEEeeecCCccccEEEEecCC---CceEEEecCCc----cCCCccc-eEEEEECCCCcE-EEEeCCCcEEEEeCCCCeee
Q psy519 14 FIQNSFKPETVEDVLANLESQ---KNLQSRYLPYY----TSGHDMT-VWSVEACSKGLA-LTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~~~~---~~i~i~~~~~~----~~~~~~~-i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~ 84 (351)
+..++|||+ |++|+..... ..|.+|++... +..+... ...+.|+|+|+. +.++.++.|++|++.+++..
T Consensus 38 ~~~~~~Spd--G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 38 FYQKCFTQD--GKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQ 115 (396)
T ss_dssp TTSCCBCTT--SCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred eecCcCCCC--CCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcE
Confidence 677899999 9998876543 36778888766 2222223 333789999987 78888889999999988766
Q ss_pred EEeeCCCCCeEE-------------------EEEeCCCCEEEEE-----eCCCcEEEEeCCCCceeEEeccCCCCeEEEE
Q psy519 85 RIFVGHKQDVTC-------------------ARFHPKITYIGTG-----SYDKAVRLWSITDGASVRVFSDHVSPVLSIA 140 (351)
Q Consensus 85 ~~~~~~~~~i~~-------------------i~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 140 (351)
.....+...... +.|+|+++.++.. ..+..|++||+.+++..... .+...+..+.
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~ 194 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPI 194 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccce
Confidence 555544432222 3456777666543 35678999999988765544 4567789999
Q ss_pred Ecc-CCCEEEEEecCCCC---CeEEEEEccCCceeEEeccC--CCCEEEEEECCCCcEEEEEcCC-----CeEEEEEcCC
Q psy519 141 FSP-CGKYLASGGTGSYD---KAVRLWSITDGASVRVFSDH--VSPVLSIAFSPCGKYLASGGED-----GLVLTHELTT 209 (351)
Q Consensus 141 ~~~-~~~~l~~~~~~~~d---~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 209 (351)
|+| +++.|+.......+ ..|.+||+..++. ..+..+ ...+..+.|+|||++|+..+.+ +.|++||+.+
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 999 78877776541111 4799999876543 333333 2247789999999987766543 4499999988
Q ss_pred CcEEEEeeccCCCCEEEEEEcC-CCCEEEEEe----------------CCCeEEEEeCCCCceeeeee------------
Q psy519 210 GRVISRFHLQEHEPVTSLVWSV-TGETLVTGS----------------LTGTVQFYGWPSASKIGIGV------------ 260 (351)
Q Consensus 210 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----------------~dg~i~i~~~~~~~~~~~~~------------ 260 (351)
++........ ... +.|+| +|+++++++ .++.|++||+.+++......
T Consensus 274 g~~~~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~ 349 (396)
T 3c5m_A 274 LENEEVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDR 349 (396)
T ss_dssp CCEEEEEECC---SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBS
T ss_pred CCeEEeeeCC---CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccc
Confidence 8754433221 233 89999 999888754 34789999998876543321
Q ss_pred ---cceeEEecCCceeeeeeccc
Q psy519 261 ---YPRCAAQPVGFEAATLAANS 280 (351)
Q Consensus 261 ---~~~~~~s~~~~~~~~~~~~~ 280 (351)
...+.|+|+|+.+++.....
T Consensus 350 ~~~~~~~~~s~dg~~l~~~s~~~ 372 (396)
T 3c5m_A 350 QITHPHPSFTPNDDGVLFTSDFE 372 (396)
T ss_dssp STTCCCCEECTTSSEEEEEECTT
T ss_pred cCCCCCceEccCCCeEEEEecCC
Confidence 34578999999888776543
No 167
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=5.9e-21 Score=176.13 Aligned_cols=225 Identities=12% Similarity=0.094 Sum_probs=161.8
Q ss_pred ccceEEEEECCCCcE-EEEeC-CCcEEEEeCCCCeeeEEeeCCC-CCeEEEEEeCCCCEEEEEeC---CCcEEEEeCCC-
Q psy519 50 DMTVWSVEACSKGLA-LTGSR-DTTARLWSLEQMYPLRIFVGHK-QDVTCARFHPKITYIGTGSY---DKAVRLWSITD- 122 (351)
Q Consensus 50 ~~~i~~~~~~~~~~~-~~~~~-d~~i~vw~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~l~~~~~---dg~i~i~d~~~- 122 (351)
..+|++++|+|||+. +.++. |++++||++.+++..+ +..+. ..+..++|+|| +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 567999999999987 66665 9999999997766554 44444 68899999999 77777765 45555655432
Q ss_pred --CceeEEeccCCCCeEEEEEccCCCEE-EEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCC
Q psy519 123 --GASVRVFSDHVSPVLSIAFSPCGKYL-ASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGED 199 (351)
Q Consensus 123 --~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 199 (351)
+... .+... ..+...+|+|+|+.+ ++... ++.+.+||+.+++.......+. .+++|+|||+++++++.+
T Consensus 99 ~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~---~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 99 RPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGAT---EDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp STTCCE-ECTTS-CSBEEEEEEECSSCEEEEEEC---SSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEE
T ss_pred CCCccc-cccCC-CCceeeeeCCCCCeEEEEecC---CCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEc
Confidence 2222 44322 334567889988643 33333 5556699999887655544333 789999999999988776
Q ss_pred ----CeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeee----eecceeE----
Q psy519 200 ----GLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTG--TVQFYGWPSASKIGI----GVYPRCA---- 265 (351)
Q Consensus 200 ----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~----~~~~~~~---- 265 (351)
+.|++||+.+++.. .+. .+...+..++|+|||++|+++..++ .|++||+.+++.... ..+..++
T Consensus 171 ~~~~~~i~~~d~~~g~~~-~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLR-VFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAI 248 (582)
T ss_dssp ETTEEEEEEEETTTCCCE-EEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEE
T ss_pred CCCCeEEEEEcCCCCCce-Eee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccc
Confidence 78999999888765 332 4556789999999999999888888 899999998876621 1223456
Q ss_pred ----EecCCceeeeeeccceeeEEE
Q psy519 266 ----AQPVGFEAATLAANSRVRTLR 286 (351)
Q Consensus 266 ----~s~~~~~~~~~~~~~~~~~~~ 286 (351)
|+|||..+++...++..+.+.
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEE
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEE
Confidence 999997677777777544433
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=1e-20 Score=179.26 Aligned_cols=241 Identities=10% Similarity=0.063 Sum_probs=174.8
Q ss_pred ceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCC-----eEEEEEeCCCCEEEEEeCC---------CcEEE
Q psy519 52 TVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHKQD-----VTCARFHPKITYIGTGSYD---------KAVRL 117 (351)
Q Consensus 52 ~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-----i~~i~~~~~~~~l~~~~~d---------g~i~i 117 (351)
....+.|+|+|+++..+ |++|++||+.+++....+.+|... ...++|||||++|+.++.+ +.+.+
T Consensus 18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 45688999999885445 999999999999987777776532 2347899999999998875 56789
Q ss_pred EeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEe-ccCCCCE---------------
Q psy519 118 WSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVF-SDHVSPV--------------- 181 (351)
Q Consensus 118 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~i--------------- 181 (351)
||+.+++... +..+...+...+|||||+.|+.+. ++.|++||+.+++..+.. .++...+
T Consensus 97 ~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 97 YDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE----CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 9999987543 556778899999999999999884 789999999887654422 1222222
Q ss_pred --EEEEECCCCcEEEEEcCCC------------------------------------eEEEEEcCC---Cc--EEEEeec
Q psy519 182 --LSIAFSPCGKYLASGGEDG------------------------------------LVLTHELTT---GR--VISRFHL 218 (351)
Q Consensus 182 --~~~~~~~~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~--~~~~~~~ 218 (351)
..+.|||||++|+..+.|. .|++||+.+ ++ ....+..
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 3489999999998875221 588899988 63 2223322
Q ss_pred -----cCCCCEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCc-------eee---e---ee-----cceeEEecCCc
Q psy519 219 -----QEHEPVTSLVWSVTGETLVTGSL----TGTVQFYGWPSAS-------KIG---I---GV-----YPRCAAQPVGF 271 (351)
Q Consensus 219 -----~~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~~~~~~~-------~~~---~---~~-----~~~~~~s~~~~ 271 (351)
.+...+..++|+|||+.++.... +..|.+||+.+++ ... . .. .....|+|||+
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~ 331 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN 331 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCC
Confidence 14456889999999997665433 3479999998876 111 1 11 23689999999
Q ss_pred eee-eeeccceeeEEEeeeceeCceEEE
Q psy519 272 EAA-TLAANSRVRTLREMHEIVGPVVVV 298 (351)
Q Consensus 272 ~~~-~~~~~~~~~~~~~~~~~~g~~~~~ 298 (351)
.++ ..+..+....+.+|+...+....+
T Consensus 332 ~l~~~~s~~~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 332 SFYKIISNEEGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp EEEEEEECTTSCEEEEEEETTCSSCEES
T ss_pred EEEEEEEcCCCceEEEEEECCCCceEec
Confidence 887 665555566788888766654433
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=2.2e-19 Score=153.55 Aligned_cols=235 Identities=14% Similarity=0.126 Sum_probs=179.7
Q ss_pred ccceEEeeecCCccccEEEEecCC------------------------CceEEEecCCc------cCCCccceEEEEECC
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQ------------------------KNLQSRYLPYY------TSGHDMTVWSVEACS 60 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~------------------------~~i~i~~~~~~------~~~~~~~i~~~~~~~ 60 (351)
-..+.+++++|+ |+++++...+ +.|.+||..++ ..++-.....+++++
T Consensus 23 l~~v~~va~d~~--G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSK--NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTT--CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCC--CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 357899999999 9999888776 47999998755 223445788999999
Q ss_pred CCcE-EEEeCCCcEEEEeCCCCe-eeEEe---------eCCCCCeEEEEEeC-CCCEEEEEe-CCCcEEEEeCCCCceeE
Q psy519 61 KGLA-LTGSRDTTARLWSLEQMY-PLRIF---------VGHKQDVTCARFHP-KITYIGTGS-YDKAVRLWSITDGASVR 127 (351)
Q Consensus 61 ~~~~-~~~~~d~~i~vw~~~~~~-~~~~~---------~~~~~~i~~i~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~~ 127 (351)
+|.+ ++...++.|++|+..... .+..+ ..+......++++| ++.++++.+ .++.|++|| .+++.+.
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 9988 777788999999986542 44444 23444688999999 788888876 689999999 5677766
Q ss_pred EeccC----------CCCeEEEEEccC-CCEEEEEecCCCCCeEEEEEccCCceeEEec--cCCCCEEEEEECCCCcEEE
Q psy519 128 VFSDH----------VSPVLSIAFSPC-GKYLASGGTGSYDKAVRLWSITDGASVRVFS--DHVSPVLSIAFSPCGKYLA 194 (351)
Q Consensus 128 ~~~~~----------~~~i~~~~~~~~-~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~ 194 (351)
.+... ......++++|+ +.++++... ++.|++||..+++.+..+. .+...+..++++| +..+.
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~---~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE---NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFA 255 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEE
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---CCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEE
Confidence 66422 234789999998 555555555 8899999998888888774 4556788999999 43333
Q ss_pred EE-------cCCCeEEEEEcCCCcEEEEee--ccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy519 195 SG-------GEDGLVLTHELTTGRVISRFH--LQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 195 ~~-------~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~ 252 (351)
+. ..+..|++||+.+++.+..+. ..+...+..++++|+|.++++...++.|++|++..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 33 334589999999999888763 13346789999999998888888899999999764
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.87 E-value=1.9e-19 Score=168.57 Aligned_cols=284 Identities=12% Similarity=0.040 Sum_probs=191.9
Q ss_pred CCCccceEEeeecCCccccEEEEe--cCCCceEEEecCCc-----cCCCccceE---------EEEEC--CCCcE-EEEe
Q psy519 8 HGDHKHFIQNSFKPETVEDVLANL--ESQKNLQSRYLPYY-----TSGHDMTVW---------SVEAC--SKGLA-LTGS 68 (351)
Q Consensus 8 ~~~~~~v~~~~~sp~~~~~~l~~~--~~~~~i~i~~~~~~-----~~~~~~~i~---------~~~~~--~~~~~-~~~~ 68 (351)
.+|...+..++|+++ +-+++.. +.++...||..... +..+...+. ...|+ |||+. +..+
T Consensus 20 ~~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 20 ASRSGRPACVGAVGD--EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHTCSCCEEEEEETT--EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred hhcCCccceeEEcCC--eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 357788999999988 7777777 56788999985332 445555555 55565 89865 4444
Q ss_pred C--CCcEEEEeCC--C-CeeeEEeeC-----CCCCeEEEEEeCCCCEEEEEeCC----------CcEEEEeCCC------
Q psy519 69 R--DTTARLWSLE--Q-MYPLRIFVG-----HKQDVTCARFHPKITYIGTGSYD----------KAVRLWSITD------ 122 (351)
Q Consensus 69 ~--d~~i~vw~~~--~-~~~~~~~~~-----~~~~i~~i~~~~~~~~l~~~~~d----------g~i~i~d~~~------ 122 (351)
. +..|.++++. . ++ ...+.. |...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 3 4667777765 3 43 344544 56778899999999999988876 5899999987
Q ss_pred CceeEEec-cCCCCeEEEEEccCCCEEEEEecCC-----CCCeEEEEEcc-CC---ceeEEeccCCCCEEEEEECCCCcE
Q psy519 123 GASVRVFS-DHVSPVLSIAFSPCGKYLASGGTGS-----YDKAVRLWSIT-DG---ASVRVFSDHVSPVLSIAFSPCGKY 192 (351)
Q Consensus 123 ~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~-----~d~~i~i~d~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~ 192 (351)
++. ..+. .+...+..++|+|||++|+.++... ....|++||+. ++ +.......+...+..+.|+|||++
T Consensus 177 ~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 177 SAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred Cce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 544 4454 5567788899999999999877511 01479999998 56 333444445678999999999998
Q ss_pred EEEEcCCC--eEEEEEcCCCcEEEEeeccCCCC--------EEEEEEcCCCCEEEEEeCCCeEEEE--eCCCCceeee--
Q psy519 193 LASGGEDG--LVLTHELTTGRVISRFHLQEHEP--------VTSLVWSVTGETLVTGSLTGTVQFY--GWPSASKIGI-- 258 (351)
Q Consensus 193 l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~dg~i~i~--~~~~~~~~~~-- 258 (351)
++++..++ .|++||+.+++...... .+... +..++|+|+++++++++. +.+++| |+.+++....
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAG 333 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCS
T ss_pred EEEECCCCCeEEEEEECCCCceeeccc-ccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecC
Confidence 88888888 67777776666443222 11111 567899999999999998 999999 6555553322
Q ss_pred --eecceeEEecCCceeeeee-ccceeeEEEeeeceeCceEEE
Q psy519 259 --GVYPRCAAQPVGFEAATLA-ANSRVRTLREMHEIVGPVVVV 298 (351)
Q Consensus 259 --~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~ 298 (351)
..+..+ +++++..++... .......+..++..+++...+
T Consensus 334 ~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 334 PWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp SCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 112222 267776544433 333334455566666664444
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=2.9e-18 Score=146.85 Aligned_cols=265 Identities=14% Similarity=0.044 Sum_probs=189.1
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc--cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEee
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~ 88 (351)
..|.+++|+|+ +..++....++.++.|.-... +..+...+.+++|+++|++ +++..++.|.+||.++++......
T Consensus 6 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 6 QDLPTLFYSGK--SNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCCBCCSCGG--GGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred cccceeeecCC--ccceeEEeecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 45788999999 888887778889999933222 4455667789999999998 677888999999999887665544
Q ss_pred CCCCCeEEEEEeCCCCEEEEEeCC----CcEEEEeCCCCceeEEec--cCCCCeEEEEEccCCCEEEEEecC---CCCCe
Q psy519 89 GHKQDVTCARFHPKITYIGTGSYD----KAVRLWSITDGASVRVFS--DHVSPVLSIAFSPCGKYLASGGTG---SYDKA 159 (351)
Q Consensus 89 ~~~~~i~~i~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~---~~d~~ 159 (351)
.+...+.+++++|+++++++...+ +.|.+||..+++....+. .....+.+++++|+|+++++.... ...+.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 566789999999999888777666 689999988776543332 234578999999999887765420 00245
Q ss_pred EEEEEccCCceeEEeccCCCCEEEEEECCCCcEEE-EEcCCCeEEEEEcCC-CcEEEEe------eccCCCCEEEEEEcC
Q psy519 160 VRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLA-SGGEDGLVLTHELTT-GRVISRF------HLQEHEPVTSLVWSV 231 (351)
Q Consensus 160 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~~------~~~~~~~v~~~~~~~ 231 (351)
|..+|..+++... +......+..++|+|+++.++ +.+.++.|.+||+.+ +.....+ .......+..+++++
T Consensus 164 l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~ 242 (333)
T 2dg1_A 164 VYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS 242 (333)
T ss_dssp EEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT
T ss_pred EEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECC
Confidence 6667765544333 222334578999999998655 455678999999963 3322211 111224678899999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeee-----------ecceeEEecCCceeeeeeccc
Q psy519 232 TGETLVTGSLTGTVQFYGWPSASKIGIG-----------VYPRCAAQPVGFEAATLAANS 280 (351)
Q Consensus 232 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~-----------~~~~~~~s~~~~~~~~~~~~~ 280 (351)
+|+++++...++.|.+||.. ++.+... .+..++|+|++..+.++...+
T Consensus 243 ~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 243 DDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp TCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 99988888788999999984 5444331 356788999987766655554
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=6.8e-18 Score=144.30 Aligned_cols=234 Identities=15% Similarity=0.069 Sum_probs=172.6
Q ss_pred CccceEEEEECCCCcE-EEEeCC------------------------CcEEEEeCCCCeeeEEee-CCCCCeEEEEEeCC
Q psy519 49 HDMTVWSVEACSKGLA-LTGSRD------------------------TTARLWSLEQMYPLRIFV-GHKQDVTCARFHPK 102 (351)
Q Consensus 49 ~~~~i~~~~~~~~~~~-~~~~~d------------------------~~i~vw~~~~~~~~~~~~-~~~~~i~~i~~~~~ 102 (351)
.-+.+.+++++++|++ ++...+ +.|.+||..+++.+..+. .+-.....++++|+
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 3467899999999988 555555 379999999888776654 34457899999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCc-eeEEe---------ccCCCCeEEEEEcc-CCCEEEEEe-cCCCCCeEEEEEccCCce
Q psy519 103 ITYIGTGSYDKAVRLWSITDGA-SVRVF---------SDHVSPVLSIAFSP-CGKYLASGG-TGSYDKAVRLWSITDGAS 170 (351)
Q Consensus 103 ~~~l~~~~~dg~i~i~d~~~~~-~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~~~~d~~i~i~d~~~~~~ 170 (351)
++++++...++.|++||..... .+..+ ..+......++++| +++++++.+ . ++.|++|| .+++.
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~---~~~I~~~~-~~g~~ 177 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC---NSRIVQFS-PSGKF 177 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS---CCEEEEEC-TTSCE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC---CCeEEEEc-CCCCE
Confidence 9988888888999999976442 44444 23344689999999 788777764 5 88999999 56777
Q ss_pred eEEeccCC----------CCEEEEEECCC-CcEEEEEcCCCeEEEEEcCCCcEEEEeecc-CCCCEEEEEEcC------C
Q psy519 171 VRVFSDHV----------SPVLSIAFSPC-GKYLASGGEDGLVLTHELTTGRVISRFHLQ-EHEPVTSLVWSV------T 232 (351)
Q Consensus 171 ~~~~~~~~----------~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~------~ 232 (351)
+..+.... ..+..++++|+ +.++++...++.|++||..+++.+..+... ....+..++|+| +
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 257 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVN 257 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeC
Confidence 76664222 33789999998 777788888999999999888888877533 235788999999 3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeee--------ecceeEEecCCceeeeeeccceeeEEE
Q psy519 233 GETLVTGSLTGTVQFYGWPSASKIGIG--------VYPRCAAQPVGFEAATLAANSRVRTLR 286 (351)
Q Consensus 233 ~~~l~~~~~dg~i~i~~~~~~~~~~~~--------~~~~~~~s~~~~~~~~~~~~~~~~~~~ 286 (351)
|+..++...+..|++|+..+++.+... ....++++|+|..+++...++++..+.
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 332233334558999999999877652 245789999996665555555444433
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.83 E-value=7.7e-20 Score=160.27 Aligned_cols=260 Identities=8% Similarity=-0.048 Sum_probs=172.9
Q ss_pred ceEEEEECCCCcE-EEEeC---CCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeE
Q psy519 52 TVWSVEACSKGLA-LTGSR---DTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVR 127 (351)
Q Consensus 52 ~i~~~~~~~~~~~-~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 127 (351)
.+..++|+|+|+. +.... +..|.+||+.+++.......+......+.|+||++.|+.++.++.|++||+.+++...
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 3667899999987 44433 2478899999887654443333333347899999999999999999999999887665
Q ss_pred EeccCCCCeEE-------------------EEEccCCCEEEEEe--cCCCCCeEEEEEccCCceeEEeccCCCCEEEEEE
Q psy519 128 VFSDHVSPVLS-------------------IAFSPCGKYLASGG--TGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAF 186 (351)
Q Consensus 128 ~~~~~~~~i~~-------------------~~~~~~~~~l~~~~--~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 186 (351)
....+...... +.|+|+++.++... ....+..|.+||+.+++..... .+...+..+.|
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceE
Confidence 55433332222 34567777665442 0012678999999888765544 45677899999
Q ss_pred CC-CCcEEEEEcCC------CeEEEEEcCCCcEEEEeeccC-CCCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCC
Q psy519 187 SP-CGKYLASGGED------GLVLTHELTTGRVISRFHLQE-HEPVTSLVWSVTGETLVTGSLT-----GTVQFYGWPSA 253 (351)
Q Consensus 187 ~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~ 253 (351)
+| +++.|+..+.+ ..|.+||+..++.. .+.... ...+..+.|+|+|++|+.++.+ +.|++||+.++
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 99 78877766543 46888998765433 232111 2357889999999987776543 45999999988
Q ss_pred ceeeeee--cceeEEec-CCceeeeeecc-------------ceeeEEEeeeceeCceEEEeeEE---------------
Q psy519 254 SKIGIGV--YPRCAAQP-VGFEAATLAAN-------------SRVRTLREMHEIVGPVVVVESFI--------------- 302 (351)
Q Consensus 254 ~~~~~~~--~~~~~~s~-~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~~~~--------------- 302 (351)
+...... .....|+| +|..+++...+ .....+.+|+..++....+....
T Consensus 275 ~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 354 (396)
T 3c5m_A 275 ENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHP 354 (396)
T ss_dssp CEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCC
T ss_pred CeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCC
Confidence 6544321 12278999 99977765432 12356778887766544433211
Q ss_pred -EEecCCceeec
Q psy519 303 -VEIRPDKWYEA 313 (351)
Q Consensus 303 -~~~~~~~~~~~ 313 (351)
..|+|++.+..
T Consensus 355 ~~~~s~dg~~l~ 366 (396)
T 3c5m_A 355 HPSFTPNDDGVL 366 (396)
T ss_dssp CCEECTTSSEEE
T ss_pred CceEccCCCeEE
Confidence 36788887654
No 174
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.83 E-value=1.7e-17 Score=137.65 Aligned_cols=238 Identities=5% Similarity=-0.092 Sum_probs=173.7
Q ss_pred ceEEeeecCCccccEEE-EecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEE
Q psy519 13 HFIQNSFKPETVEDVLA-NLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRI 86 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~-~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~ 86 (351)
...+++++|+ |.+++ +...++.|.+|+.... ...+...+.++++.++|.+..+..++.|.+||.........
T Consensus 25 ~p~~i~~~~~--g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSA--GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTT--CCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred CccceEECCC--CCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeee
Confidence 6788999999 98777 5467889999987654 12333567889999999884444488999999876544322
Q ss_pred eeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEcc
Q psy519 87 FVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSIT 166 (351)
Q Consensus 87 ~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~ 166 (351)
.......+.++++.++++++++...++.|.+|+..+.............+.+++++++|+++++... ++.|.+||..
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~ 179 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTD---NNRVVKLEAE 179 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGG---GTEEEEECTT
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECC---CCEEEEEecC
Confidence 2223357899999999997777777889999986655433322233346788999999987776655 7899999987
Q ss_pred CCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEE
Q psy519 167 DGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQ 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 246 (351)
..........+...+..++++++|.++++...++.|.+||....... .....+...+.+++++++|+++++...++.|+
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE-ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce-eeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 66544333333367889999999988887777889999998655433 23222335789999999999888888899999
Q ss_pred EEeCCCCcee
Q psy519 247 FYGWPSASKI 256 (351)
Q Consensus 247 i~~~~~~~~~ 256 (351)
++++...+..
T Consensus 259 ~~~~~~~~~~ 268 (270)
T 1rwi_B 259 KLTSLEHHHH 268 (270)
T ss_dssp EECCCGGGSC
T ss_pred EEcCCCcccc
Confidence 9998876543
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.83 E-value=3.8e-18 Score=160.92 Aligned_cols=246 Identities=10% Similarity=0.007 Sum_probs=176.4
Q ss_pred CcCCCCccceEEeeecCCccccEEEEecCCC-----ceEEEecCCc--c--CCCccceEEEEECCCCcE-EEEeCCCc--
Q psy519 5 HLNHGDHKHFIQNSFKPETVEDVLANLESQK-----NLQSRYLPYY--T--SGHDMTVWSVEACSKGLA-LTGSRDTT-- 72 (351)
Q Consensus 5 ~~~~~~~~~v~~~~~sp~~~~~~l~~~~~~~-----~i~i~~~~~~--~--~~~~~~i~~~~~~~~~~~-~~~~~d~~-- 72 (351)
.+..+|...+..++|||| |++||.+..++ .|++||+.++ . ......+..++|+|||+. +.++.++.
T Consensus 118 ~l~~~~~~~~~~~~~SPD--g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 118 ILSDDGTVALRGYAFSED--GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp GGCTTSCEEEEEEEECTT--SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSS
T ss_pred HhccCCCEEEEEEEECCC--CCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccc
Confidence 445566667889999999 99999775533 8999999887 1 112223567999999976 66666655
Q ss_pred --------------EEEEeCCCCee--eEEee--CCCCCeEEEEEeCCCCEEEEEeC-----CCcEEEEeCCC------C
Q psy519 73 --------------ARLWSLEQMYP--LRIFV--GHKQDVTCARFHPKITYIGTGSY-----DKAVRLWSITD------G 123 (351)
Q Consensus 73 --------------i~vw~~~~~~~--~~~~~--~~~~~i~~i~~~~~~~~l~~~~~-----dg~i~i~d~~~------~ 123 (351)
|++|++.+++. ...+. .+...+..+.|+|||++|+.++. +..|++||+.+ +
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 99999988762 22223 24555789999999999887764 56899999976 4
Q ss_pred c-eeEEeccCCCCeEEEEEccCCCEEEEEecCC-CCCeEEEEEccCCc--eeEEeccCCC--CEEEEEECCCCcEEEEEc
Q psy519 124 A-SVRVFSDHVSPVLSIAFSPCGKYLASGGTGS-YDKAVRLWSITDGA--SVRVFSDHVS--PVLSIAFSPCGKYLASGG 197 (351)
Q Consensus 124 ~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-~d~~i~i~d~~~~~--~~~~~~~~~~--~i~~~~~~~~~~~l~~~~ 197 (351)
. ....+..+...+.. .|+|+|+.|+..+... .+..|.+||+.++. ....+..+.. .+..+.|++++.++++..
T Consensus 276 ~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 276 ILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp SCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred ccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence 3 35555555555554 5889998887765421 14579999998764 2344444433 577899998888888888
Q ss_pred CCCe--EEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEE-e---CCCeEEEEeCCCCc
Q psy519 198 EDGL--VLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTG-S---LTGTVQFYGWPSAS 254 (351)
Q Consensus 198 ~dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~dg~i~i~~~~~~~ 254 (351)
.++. |.+||+.+++.+..+... ...+..+.++|+++.++.. + ..++++.||+.+++
T Consensus 355 ~~g~~~l~~~~~~~g~~~~~l~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 355 HDVKNTLQLHDLATGALLKIFPLE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ETTEEEEEEEETTTCCEEEEECCC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ECCEEEEEEEECCCCCEEEecCCC-CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8874 667787678777777543 5678889999998766533 2 34799999998876
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=1e-17 Score=144.14 Aligned_cols=250 Identities=8% Similarity=0.014 Sum_probs=166.0
Q ss_pred cceEEeeecCCccccEEEEec---------CCCceEEEecCCccCCCccceEEEEECCCCcE-EEEeCC---C--cEEEE
Q psy519 12 KHFIQNSFKPETVEDVLANLE---------SQKNLQSRYLPYYTSGHDMTVWSVEACSKGLA-LTGSRD---T--TARLW 76 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~---------~~~~i~i~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d---~--~i~vw 76 (351)
..+...++ + |++++... .++.|.+|++.......-..+..+.|+|+|+. +..+.+ + .|.+|
T Consensus 15 ~~~~~~~~--d--G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~ 90 (347)
T 2gop_A 15 AYLSDPRT--K--GELVAYVLTKANLKDNKYENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVA 90 (347)
T ss_dssp CEEEEEEE--E--TTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEE
T ss_pred EEcccceE--C--CcEEEEEEeecCcccCCccceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEE
Confidence 55677788 7 88888752 25678899987651111156788999999976 544432 2 48888
Q ss_pred eCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC---------------------------CcEEEEeCCCCceeEEe
Q psy519 77 SLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYD---------------------------KAVRLWSITDGASVRVF 129 (351)
Q Consensus 77 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---------------------------g~i~i~d~~~~~~~~~~ 129 (351)
++.+++.......+ . +..++|+||++.|+.++.+ ..|++||+.+++.+..+
T Consensus 91 ~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l 168 (347)
T 2gop_A 91 DLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF 168 (347)
T ss_dssp ETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEE
T ss_pred ECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee
Confidence 99888766555433 3 8999999999988887632 57999999988764555
Q ss_pred ccCCCCeEEEEEccCCCEEEEEecCCC-C--C-eEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCC------
Q psy519 130 SDHVSPVLSIAFSPCGKYLASGGTGSY-D--K-AVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGED------ 199 (351)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~l~~~~~~~~-d--~-~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------ 199 (351)
.. . .+..++|+|+| +++++..... . . ...+|.+.+++ ...+..+ ..+..+ +|||++|+.++.+
T Consensus 169 ~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~ 241 (347)
T 2gop_A 169 EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMS 241 (347)
T ss_dssp EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCC
T ss_pred cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCcc
Confidence 44 3 78899999999 7776654110 0 2 34444444444 3444344 455544 9999988877643
Q ss_pred --CeEEEEEcCCCcEEEEeeccCCCCEEE-EEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eecceeEEecCCce
Q psy519 200 --GLVLTHELTTGRVISRFHLQEHEPVTS-LVWSVTGETLVTGSLTGTVQFYGWPSASKIGI----GVYPRCAAQPVGFE 272 (351)
Q Consensus 200 --g~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~~ 272 (351)
..|.+|| +++. ..+...+...+.. +.|+ ++ ++++++.++.+++| +.+++.... ..+..++|+| ..
T Consensus 242 ~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~ 313 (347)
T 2gop_A 242 EHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IV 313 (347)
T ss_dssp SSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SE
T ss_pred ccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cE
Confidence 4688888 4543 3333234466776 9999 88 88899999999999 876554332 2345677887 44
Q ss_pred eeeeecccee
Q psy519 273 AATLAANSRV 282 (351)
Q Consensus 273 ~~~~~~~~~~ 282 (351)
+++...++..
T Consensus 314 ~~~~~~~~~~ 323 (347)
T 2gop_A 314 VYLKETATRL 323 (347)
T ss_dssp EEEEECSSSC
T ss_pred EEEEcCCCCh
Confidence 4444444443
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=1e-16 Score=134.09 Aligned_cols=233 Identities=11% Similarity=0.064 Sum_probs=170.6
Q ss_pred cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEee------CCCCCeEEEEEe-CCCCEEEEEeC-CCcEE
Q psy519 46 TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFV------GHKQDVTCARFH-PKITYIGTGSY-DKAVR 116 (351)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~------~~~~~i~~i~~~-~~~~~l~~~~~-dg~i~ 116 (351)
..++-..+.++++++++.+ ++...++.|.+||.+ ++.+..+. ++...+..+++. ++++++++... ++.|+
T Consensus 25 ~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 25 MEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp STTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CCCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 3456678999999999988 676788999999987 55555553 234578899995 67766665533 78999
Q ss_pred EEeCCCCceeEEecc-CCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEec--cCCCCEEEEEECCCCcEE
Q psy519 117 LWSITDGASVRVFSD-HVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFS--DHVSPVLSIAFSPCGKYL 193 (351)
Q Consensus 117 i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l 193 (351)
+|| .+++.+..+.. +...+.+++++|+|+++++... ++.|.+||. .++.+..+. .+...+..++++|+++++
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK---VMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT---TTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECC---CCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 999 56776666632 3457899999999987777666 789999996 455555553 344568999999999988
Q ss_pred EEEcCCCeEEEEEcCCCcEEEEeeccC-CCCEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCCceeeee-------eccee
Q psy519 194 ASGGEDGLVLTHELTTGRVISRFHLQE-HEPVTSLVWSVTGETLVTGSLTG-TVQFYGWPSASKIGIG-------VYPRC 264 (351)
Q Consensus 194 ~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg-~i~i~~~~~~~~~~~~-------~~~~~ 264 (351)
++...++.|++||. +++.+..+.... ...+..++++++|+++++...++ .|.+|+.. ++.+... ....+
T Consensus 179 v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 179 ISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEE
T ss_pred EEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeE
Confidence 88888999999997 456666554322 25789999999999888887776 99999954 4444331 13468
Q ss_pred EEecCCceeeeeeccceeeEEEeeec
Q psy519 265 AAQPVGFEAATLAANSRVRTLREMHE 290 (351)
Q Consensus 265 ~~s~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
+++|+|..+++ ..++ .+++|+.
T Consensus 257 ~~~~~g~l~vs-~~~~---~v~v~~~ 278 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDY---RLYIYRY 278 (286)
T ss_dssp EEETTTEEEEE-ETTT---EEEEEEC
T ss_pred EECCCCcEEEE-CCCC---eEEEEEc
Confidence 99999976555 4444 4555543
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=1.2e-17 Score=144.58 Aligned_cols=239 Identities=11% Similarity=0.047 Sum_probs=157.8
Q ss_pred ccEEEEec------CCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEe----------CCCcEEEEeCCCCe
Q psy519 25 EDVLANLE------SQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGS----------RDTTARLWSLEQMY 82 (351)
Q Consensus 25 ~~~l~~~~------~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~----------~d~~i~vw~~~~~~ 82 (351)
++++.+.. .|+.|.+||..+. ...+..+ .++|+|+|++ +++. .++.|.+||+.+++
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 66655543 3678999998766 3334444 8999999987 4443 36779999999988
Q ss_pred eeEEeeCC------CCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEE-eccCCCCeEEEEEccCC-CEEEEEe
Q psy519 83 PLRIFVGH------KQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRV-FSDHVSPVLSIAFSPCG-KYLASGG 152 (351)
Q Consensus 83 ~~~~~~~~------~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~ 152 (351)
.+..+... ......++++|+|++|+++.. ++.|.+||+.+++.+.. +... . ...+.+.|++ ..+++.+
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-G-CWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-T-EEEEEECTTSSSEEEEEE
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-C-cceeEEcCCCCeeEEEEC
Confidence 88777532 234567999999999998874 57899999999988777 4321 1 1112223322 1222222
Q ss_pred c----------C-----------------------------------CCCCeEEEEEccCCce--eEEecc------CC-
Q psy519 153 T----------G-----------------------------------SYDKAVRLWSITDGAS--VRVFSD------HV- 178 (351)
Q Consensus 153 ~----------~-----------------------------------~~d~~i~i~d~~~~~~--~~~~~~------~~- 178 (351)
. . +.++.+.++|+..... ...+.. ..
T Consensus 171 ~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp TTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred CCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccc
Confidence 2 0 0033445555433221 111100 00
Q ss_pred ---CCEEEEEECCCCcEEEEEcC-----------CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCe
Q psy519 179 ---SPVLSIAFSPCGKYLASGGE-----------DGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGT 244 (351)
Q Consensus 179 ---~~i~~~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 244 (351)
.....++|+|+++.++++.. .+.|.+||+.+++.+..+.... +.+++|+|+|++|++++. +.
T Consensus 251 ~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~ia~spdg~~l~v~n~-~~ 326 (361)
T 2oiz_A 251 WVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSMTIDQQRNLMLTLDG-GN 326 (361)
T ss_dssp CEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEEEEETTTTEEEEECS-SC
T ss_pred cccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEEEECCCCCEEEEeCC-Ce
Confidence 01112688999888777643 3489999999999999886433 899999999999998887 99
Q ss_pred EEEEeCCCC--ceeeee-----ecceeEEecCCc
Q psy519 245 VQFYGWPSA--SKIGIG-----VYPRCAAQPVGF 271 (351)
Q Consensus 245 i~i~~~~~~--~~~~~~-----~~~~~~~s~~~~ 271 (351)
|.+||..++ +.+... ....++++|+|.
T Consensus 327 v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 327 VNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999999999 777652 224578888775
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=3.6e-15 Score=125.24 Aligned_cols=233 Identities=9% Similarity=-0.038 Sum_probs=174.2
Q ss_pred CccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCee
Q psy519 10 DHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYP 83 (351)
Q Consensus 10 ~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~ 83 (351)
+...+.+++++|+ |.++++...++.|..|+.... ...+...+.++++.++|.+ ++...++.|..|+.+ ++.
T Consensus 13 ~~~~~~~i~~d~~--g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 13 QDTGPYGITVSDK--GKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII 89 (299)
T ss_dssp SSCCEEEEEECTT--SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cCCCccceEECCC--CCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE
Confidence 4467899999999 998887766789999998733 2234567899999999988 555557889999986 332
Q ss_pred eEEee--CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEE-eccCCCCeEEEEEccCCCEEEEEecCCCCCeE
Q psy519 84 LRIFV--GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGTGSYDKAV 160 (351)
Q Consensus 84 ~~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i 160 (351)
..+. .....+.++++.++++++++...++.|..||. +++.... .......+.+++++++|++.++... ++.|
T Consensus 90 -~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i 164 (299)
T 2z2n_A 90 -KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ---NNAI 164 (299)
T ss_dssp -EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEE
T ss_pred -EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC---CCEE
Confidence 2222 24557899999999988887777889999998 5554332 2334567899999999988777655 7899
Q ss_pred EEEEccCCceeEE-eccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc-CCCCEEEEEEcCCCCEEEE
Q psy519 161 RLWSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ-EHEPVTSLVWSVTGETLVT 238 (351)
Q Consensus 161 ~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~ 238 (351)
..||. +++.... .......+..++++++++++++...++.|..||. +++... +... ....+.+++++++|+++++
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEe
Confidence 99998 6654432 3334456889999999998777777889999999 666433 3222 3367899999999997777
Q ss_pred EeCCCeEEEEeCCCCc
Q psy519 239 GSLTGTVQFYGWPSAS 254 (351)
Q Consensus 239 ~~~dg~i~i~~~~~~~ 254 (351)
...++.|..||. +++
T Consensus 242 ~~~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 242 EWGANKIGRLTS-NNI 256 (299)
T ss_dssp ETTTTEEEEEET-TTE
T ss_pred ccCCceEEEECC-CCc
Confidence 667889999998 443
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=9.1e-17 Score=135.20 Aligned_cols=234 Identities=12% Similarity=-0.024 Sum_probs=169.6
Q ss_pred CccceEEeeecCCcccc-EEEEecCCCceEEEecCCc---cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeee
Q psy519 10 DHKHFIQNSFKPETVED-VLANLESQKNLQSRYLPYY---TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 10 ~~~~v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~ 84 (351)
+.....+++|+|+ ++ +++++..++.|..|+.... +..+...+.+++++++|++ ++...++.|.+||..+++..
T Consensus 26 ~~~~~eg~~~d~~--g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 26 GFTWTEGPVYVPA--RSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp CCSSEEEEEEEGG--GTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred CCccccCCeEeCC--CCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 3445678999999 98 7788888899999998875 3445677899999999998 55555689999999887754
Q ss_pred EEeeCC----CCCeEEEEEeCCCCEEEEE----e-------------CCCcEEEEeCCCCceeEEeccCCCCeEEEEEcc
Q psy519 85 RIFVGH----KQDVTCARFHPKITYIGTG----S-------------YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSP 143 (351)
Q Consensus 85 ~~~~~~----~~~i~~i~~~~~~~~l~~~----~-------------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 143 (351)
...... ...+..++++|+|+++++. + ..+.|..++.. ++ ...+..+......++|+|
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~ 181 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLP 181 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECT
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECC
Confidence 333211 1345679999999988873 2 13466666655 44 334444566778999999
Q ss_pred CCCEEEEEecCCCCCeEEEEEcc-CCce---eEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc
Q psy519 144 CGKYLASGGTGSYDKAVRLWSIT-DGAS---VRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ 219 (351)
Q Consensus 144 ~~~~l~~~~~~~~d~~i~i~d~~-~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 219 (351)
+++.+++... ++.|.+||+. +++. ...+..+...+..++++++|+++++. ++.|.+||.. ++.+..+...
T Consensus 182 dg~~lv~~~~---~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~ 255 (296)
T 3e5z_A 182 SGNLLVSDTG---DNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTP 255 (296)
T ss_dssp TSCEEEEETT---TTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECS
T ss_pred CCCEEEEeCC---CCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECC
Confidence 9999865555 7899999997 4543 23333344556789999999876666 7889999986 7777777543
Q ss_pred CCCCEEEEEE-cCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy519 220 EHEPVTSLVW-SVTGETLVTGSLTGTVQFYGWPSASKI 256 (351)
Q Consensus 220 ~~~~v~~~~~-~~~~~~l~~~~~dg~i~i~~~~~~~~~ 256 (351)
. . +.+++| .|+++.|++++.+ .+.-++.++.+..
T Consensus 256 ~-~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 256 Q-T-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp S-C-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCC
T ss_pred C-C-ceeEEEECCCCCEEEEEcCC-eEEEEEccccccc
Confidence 3 3 889999 5899989888875 5556666665543
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=9.5e-18 Score=157.03 Aligned_cols=234 Identities=12% Similarity=0.013 Sum_probs=160.8
Q ss_pred Eeeec--CCccccE-EEEecC-CCceEEEecC--C-c----cCC-----CccceEEEEECCCCcE-EEEeCC--------
Q psy519 16 QNSFK--PETVEDV-LANLES-QKNLQSRYLP--Y-Y----TSG-----HDMTVWSVEACSKGLA-LTGSRD-------- 70 (351)
Q Consensus 16 ~~~~s--p~~~~~~-l~~~~~-~~~i~i~~~~--~-~----~~~-----~~~~i~~~~~~~~~~~-~~~~~d-------- 70 (351)
...|+ || |+. |+.++. +..|.++++. . . +.. |...+..++|+|||+. +.++.+
T Consensus 81 ~~~~~~SPD--g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 81 PWAGVPRPA--GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CEEEECCSS--SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred cceeeeecC--CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 44455 99 988 776654 5678888876 2 3 334 6778899999999987 666655
Q ss_pred --CcEEEEeCCC------CeeeEEee-CCCCCeEEEEEeCCCCEEEEEeCC--------CcEEEEeCC-CC---ceeEEe
Q psy519 71 --TTARLWSLEQ------MYPLRIFV-GHKQDVTCARFHPKITYIGTGSYD--------KAVRLWSIT-DG---ASVRVF 129 (351)
Q Consensus 71 --~~i~vw~~~~------~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~ 129 (351)
..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ +.....
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred ceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 5899999988 554 3444 555677889999999999887754 379999998 56 444444
Q ss_pred ccCCCCeEEEEEccCCCEEEEEecCCCCC--eEEEEEccCCceeEEeccCCCC--------EEEEEECCCCcEEEEEcCC
Q psy519 130 SDHVSPVLSIAFSPCGKYLASGGTGSYDK--AVRLWSITDGASVRVFSDHVSP--------VLSIAFSPCGKYLASGGED 199 (351)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~l~~~~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~d 199 (351)
..+...+..++|+|||++++++.. ++ .|.+||+.+++.......+... +..++|+|+++++++++.
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~---~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDR---TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECT---TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred CCCCceEcceEECCCCeEEEEECC---CCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 445788999999999997777665 66 6777777666544333322211 457889999999999998
Q ss_pred CeEEEE--EcCCCcEEEEeeccCCCCEEEE-EEcCCCCEEEEEeCCC--eEEEEeCCCCceeee
Q psy519 200 GLVLTH--ELTTGRVISRFHLQEHEPVTSL-VWSVTGETLVTGSLTG--TVQFYGWPSASKIGI 258 (351)
Q Consensus 200 g~i~i~--d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~ 258 (351)
+.+++| |+.+++ +..+. .+...+..+ +++.+.-++++++.+. .|..+|+.+++....
T Consensus 314 ~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 314 GAAVLGILDPESGE-LVDAA-GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp SSCEEEEEETTTTE-EEECC-SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CccEEEEEECCCCc-EEEec-CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 988888 555454 55554 334556666 4443333344445553 566667777765443
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.80 E-value=1.5e-15 Score=138.01 Aligned_cols=310 Identities=10% Similarity=-0.031 Sum_probs=210.3
Q ss_pred ccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCC--CCeeeEEeeCCCCCeEEE
Q psy519 25 EDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLE--QMYPLRIFVGHKQDVTCA 97 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~i~~i 97 (351)
+.++++...++.|.++|..+. .......+..+.|+|+|++ ++++.|+.|.+||+. +++.+..+.... ....+
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~i 245 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSI 245 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCcee
Confidence 567777788999999999876 1122345678999999988 778899999999995 778777776544 45789
Q ss_pred EEe----CCCCEEEEEeC-CCcEEEEeCCCCceeEEeccC-----------CCCeEEEEEccCCCEEEEEecCCCCCeEE
Q psy519 98 RFH----PKITYIGTGSY-DKAVRLWSITDGASVRVFSDH-----------VSPVLSIAFSPCGKYLASGGTGSYDKAVR 161 (351)
Q Consensus 98 ~~~----~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l~~~~~~~~d~~i~ 161 (351)
+|+ |||+++++++. ++++.++|..+.+.+..+... ...+..+..++++..++.... .+|.|.
T Consensus 246 a~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~--~~g~v~ 323 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK--ETGKIL 323 (567)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET--TTTEEE
T ss_pred EEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec--CCCeEE
Confidence 999 69998887765 589999999999888776421 226788889998776555443 279999
Q ss_pred EEEccCCceeEEec-cCCCCEEEEEECCCCcEEEEEc-CCCeEEEEEcCCCcEEEEeec-cCC-CCEEEEE-EcCCCCEE
Q psy519 162 LWSITDGASVRVFS-DHVSPVLSIAFSPCGKYLASGG-EDGLVLTHELTTGRVISRFHL-QEH-EPVTSLV-WSVTGETL 236 (351)
Q Consensus 162 i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~~~-~~v~~~~-~~~~~~~l 236 (351)
++|....+.+.... ........+.|+|+++++++++ .++.|.++|+.+++.+..+.. ... .+-.... ++|++..+
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v 403 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPV 403 (567)
T ss_dssp EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEE
T ss_pred EEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcE
Confidence 99987754332211 2334577899999999887665 578999999999988877764 211 1111222 57875444
Q ss_pred -EEEe-CCCeEEEEeCCC-------Cceeeeeec-----ceeEEecCCceeeeeeccce----eeEEEeeeceeC-----
Q psy519 237 -VTGS-LTGTVQFYGWPS-------ASKIGIGVY-----PRCAAQPVGFEAATLAANSR----VRTLREMHEIVG----- 293 (351)
Q Consensus 237 -~~~~-~dg~i~i~~~~~-------~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~~----~~~~~~~~~~~g----- 293 (351)
+++. .++.|.++|..+ .+.++.... ..+..+|+++++.+....+. ...+.+++..+.
T Consensus 404 ~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~ 483 (567)
T 1qks_A 404 WATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGS 483 (567)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSS
T ss_pred EEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccccccc
Confidence 4443 468999999987 445554322 23667999998776553221 123444443332
Q ss_pred ----ceEEE-----------eeEEEEecCCceeeccEEE----ecCCccccceeeeeeeeecC
Q psy519 294 ----PVVVV-----------ESFIVEIRPDKWYEANLIV----LDDDLKECNLETYSQMIPVP 337 (351)
Q Consensus 294 ----~~~~~-----------~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~ 337 (351)
+...+ .....+|+|+|.+.....- .++.|..+|.++......++
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 484 DPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp CCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 12211 1133689999987654421 25778888888876655444
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=9.2e-18 Score=157.87 Aligned_cols=246 Identities=9% Similarity=-0.055 Sum_probs=172.5
Q ss_pred cCCCCccceEEeeecCCccccEEEE-----ecCCCceEEEecCCc--c-CCCccce--EEEEECCCCcE-EEEeCCCc--
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLAN-----LESQKNLQSRYLPYY--T-SGHDMTV--WSVEACSKGLA-LTGSRDTT-- 72 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~-----~~~~~~i~i~~~~~~--~-~~~~~~i--~~~~~~~~~~~-~~~~~d~~-- 72 (351)
+..+|...+..++|||| |++||. |+.+..|++||+.++ . ..+...+ ..++|+|||+. +.++.|..
T Consensus 115 ~a~~~~~~~~~~~~SPD--G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 115 WSKDGTVSLGTWAVSWD--GKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSSSSCEEEEEEEECTT--SSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred hccCCCEEEEEEEECCC--CCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCC
Confidence 44567778899999999 999994 444578999999887 3 2233334 68999999986 77777665
Q ss_pred -----------EEEEeCCCCe----eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCC----cEEEEeCCCCceeEEeccCC
Q psy519 73 -----------ARLWSLEQMY----PLRIFVGHKQDVTCARFHPKITYIGTGSYDK----AVRLWSITDGASVRVFSDHV 133 (351)
Q Consensus 73 -----------i~vw~~~~~~----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~ 133 (351)
|++|++.+++ .+.....+...+..+.|+|||++|+.++.++ .|++++..+++. ..+..+.
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~ 271 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGV 271 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECS
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCC
Confidence 9999998876 2222334556788999999999988877665 678887665543 4444455
Q ss_pred CCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCce---eEEeccC-CCCEEEEEECCCCcEEEEEcCCCeEEEEEcC-
Q psy519 134 SPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGAS---VRVFSDH-VSPVLSIAFSPCGKYLASGGEDGLVLTHELT- 208 (351)
Q Consensus 134 ~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~---~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~- 208 (351)
..+....+ ++|.+++.+.....++.|.+||+.++.. ...+..+ ...+..++|+ ++.++++...|+..++|.+.
T Consensus 272 ~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 272 GAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp SCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred CceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 56666666 5666444443212368899999987653 3333333 4457888888 77888888889988877654
Q ss_pred CCcEEEEeeccCCCCEEEEEEcCCCCEEEEEe----CCCeEEEEeCCCCcee
Q psy519 209 TGRVISRFHLQEHEPVTSLVWSVTGETLVTGS----LTGTVQFYGWPSASKI 256 (351)
Q Consensus 209 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~i~~~~~~~~~ 256 (351)
+++....+.......+..+.++|+++.++... ..++|++||+.+++..
T Consensus 350 ~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 350 KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 45556666544456678889999998776332 3478999999887643
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.80 E-value=1.7e-16 Score=149.72 Aligned_cols=245 Identities=8% Similarity=0.006 Sum_probs=169.7
Q ss_pred CCccceEEEEECCCCcE-EEEeC-CC----cEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCc-------
Q psy519 48 GHDMTVWSVEACSKGLA-LTGSR-DT----TARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKA------- 114 (351)
Q Consensus 48 ~~~~~i~~~~~~~~~~~-~~~~~-d~----~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~------- 114 (351)
+|...+..++|+|||++ +.+.. +| .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 34457889999999987 44433 23 8999999999876543222 23667999999999999887766
Q ss_pred ---------EEEEeCCCCcee--EEec--cCCCCeEEEEEccCCCEEEEEecCCC--CCeEEEEEccC------Cc-eeE
Q psy519 115 ---------VRLWSITDGASV--RVFS--DHVSPVLSIAFSPCGKYLASGGTGSY--DKAVRLWSITD------GA-SVR 172 (351)
Q Consensus 115 ---------i~i~d~~~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~--d~~i~i~d~~~------~~-~~~ 172 (351)
|++|++.+++.. ..+. .+...+..+.|+|||++|+....... +..|++||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 999999887632 2222 24556789999999999988764221 46899999986 43 355
Q ss_pred EeccCCCCEEEEEECCCCcEEEEEcCC----CeEEEEEcCCCcE--EEEeeccCC-CCEEEEEEcCCCCEEEEEeCCCe-
Q psy519 173 VFSDHVSPVLSIAFSPCGKYLASGGED----GLVLTHELTTGRV--ISRFHLQEH-EPVTSLVWSVTGETLVTGSLTGT- 244 (351)
Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~--~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~- 244 (351)
.+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..... ..+..++|++++.++++...++.
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN 359 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEE
Confidence 56566655554 488888877766543 3699999987642 233322222 36888999987888888888874
Q ss_pred -EEEEeCCCCceeee-----eecceeEEecCCceeeee-eccceeeEEEeeeceeCc
Q psy519 245 -VQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATL-AANSRVRTLREMHEIVGP 294 (351)
Q Consensus 245 -i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 294 (351)
|.+|++.+++.+.. ..+..+.++|++..+++. .+......+..|+..+|+
T Consensus 360 ~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 66778766665433 233456788888765544 444556678888887776
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.80 E-value=2.9e-16 Score=134.06 Aligned_cols=256 Identities=10% Similarity=-0.044 Sum_probs=181.8
Q ss_pred CCCceEEEecCCc-cC----------CCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeC
Q psy519 33 SQKNLQSRYLPYY-TS----------GHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHP 101 (351)
Q Consensus 33 ~~~~i~i~~~~~~-~~----------~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~ 101 (351)
.++.|.++|..+. .. ........+.+..+..+++...++.|.+||.++++.+..+.. ......+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeC
Confidence 3789999999876 10 122346778875443447777789999999999998888853 45688999998
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceeEEeccCC-----CCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEecc
Q psy519 102 KITYIGTGSYDKAVRLWSITDGASVRVFSDHV-----SPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSD 176 (351)
Q Consensus 102 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 176 (351)
+++.+++...++.|.+||..+++....+.... .....+++ ++..++++.. ..++.|.++|+.+++.+..+..
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~-~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCW-SYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEEC-TTCCEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcC-CCCCEEEEEECCCCeEEEEEEc
Confidence 88554444478999999999998777665322 14456777 3455555542 0178999999999988877754
Q ss_pred CCCCEEEEEECCCCcEEEEEcCC----------CeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEE
Q psy519 177 HVSPVLSIAFSPCGKYLASGGED----------GLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQ 246 (351)
Q Consensus 177 ~~~~i~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 246 (351)
. .....+.++|+|++++++..+ +.|.++|..+++....+.......+..++|+|++++|+++.. .|.
T Consensus 171 g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~ 247 (328)
T 3dsm_A 171 G-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIW 247 (328)
T ss_dssp S-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEE
T ss_pred C-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEE
Confidence 3 345688999999977776654 789999999998887776543457899999999999988765 899
Q ss_pred EEeCCCCceeee-------eecceeEEecCCceeeeeecc--ceeeEEEeeeceeCceE
Q psy519 247 FYGWPSASKIGI-------GVYPRCAAQPVGFEAATLAAN--SRVRTLREMHEIVGPVV 296 (351)
Q Consensus 247 i~~~~~~~~~~~-------~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~ 296 (351)
+||..+++.... .....++++|++..+.++... .....+.+|+.. |+..
T Consensus 248 ~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 248 RMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp EEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred EEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 999988775421 234468899966555444311 123456667665 5533
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=5.5e-17 Score=152.61 Aligned_cols=272 Identities=8% Similarity=-0.010 Sum_probs=180.3
Q ss_pred ecCCccccEEEEecCCC---ceEEEecC--Cc-----------cCCCccceEEEEECCCCcE-E-E----EeCCCcEEEE
Q psy519 19 FKPETVEDVLANLESQK---NLQSRYLP--YY-----------TSGHDMTVWSVEACSKGLA-L-T----GSRDTTARLW 76 (351)
Q Consensus 19 ~sp~~~~~~l~~~~~~~---~i~i~~~~--~~-----------~~~~~~~i~~~~~~~~~~~-~-~----~~~d~~i~vw 76 (351)
.+|+ |++++....++ .-.+|... .. ..+|...+..++|+|||++ + + |+.+..|++|
T Consensus 75 p~~d--G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~ 152 (695)
T 2bkl_A 75 PSRR--NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVI 152 (695)
T ss_dssp CEEE--TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEE
T ss_pred CEEE--CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEE
Confidence 3477 88888765543 34445443 22 2345667999999999987 3 2 2334689999
Q ss_pred eCCCCeee-EEeeCCCCCeEEEEEeCCCCEEEEEeCCCc-------------EEEEeCCCCce----eEEeccCCCCeEE
Q psy519 77 SLEQMYPL-RIFVGHKQDVTCARFHPKITYIGTGSYDKA-------------VRLWSITDGAS----VRVFSDHVSPVLS 138 (351)
Q Consensus 77 ~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~-------------i~i~d~~~~~~----~~~~~~~~~~i~~ 138 (351)
|+.+++.+ .... .......++|+|||+.|+.++.+.. |++|++.+++. +.....+...+..
T Consensus 153 dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 153 DVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ 231 (695)
T ss_dssp ETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred ECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence 99998865 2111 1111267899999999999988776 99999988762 2223334567889
Q ss_pred EEEccCCCEEEEEecCCCCC----eEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEc---CCCeEEEEEcCCCc
Q psy519 139 IAFSPCGKYLASGGTGSYDK----AVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGG---EDGLVLTHELTTGR 211 (351)
Q Consensus 139 ~~~~~~~~~l~~~~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~ 211 (351)
+.|+|||++|+.+.. ++ .|+++|..+++ ...+..+...+....+ ++|.+++... .++.|.+||+.++.
T Consensus 232 ~~~SpDG~~l~~~~~---~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 232 SDLSRDGKYLFVYIL---RGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEECTTSCCEEEEEE---ETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEECCCCCEEEEEEe---CCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 999999999988776 44 67777765554 3444455555566666 5666444443 25789999997765
Q ss_pred E--EEEeeccC-CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeee------eecceeEEecCCceeee-eeccc
Q psy519 212 V--ISRFHLQE-HEPVTSLVWSVTGETLVTGSLTGTVQFYGWP-SASKIGI------GVYPRCAAQPVGFEAAT-LAANS 280 (351)
Q Consensus 212 ~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~------~~~~~~~~s~~~~~~~~-~~~~~ 280 (351)
. ...+...+ ...+..++|+ ++.++++...|+..++|.+. .++.... ..+..++++|++..+++ ..+..
T Consensus 307 ~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 385 (695)
T 2bkl_A 307 RASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFT 385 (695)
T ss_dssp GGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETT
T ss_pred ccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 3 22232222 3457888988 67788888889988877654 3433322 23445778898876554 44556
Q ss_pred eeeEEEeeeceeCceEEEe
Q psy519 281 RVRTLREMHEIVGPVVVVE 299 (351)
Q Consensus 281 ~~~~~~~~~~~~g~~~~~~ 299 (351)
....+.+|+..+|+...+.
T Consensus 386 ~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 386 TPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEECCCCcEEEEe
Confidence 6778889998887754443
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=5.2e-17 Score=139.77 Aligned_cols=220 Identities=10% Similarity=0.067 Sum_probs=151.9
Q ss_pred ceEEeeecCCccccEEEEecCC---C--ceEEEecCCc----cCCCccceEEEEECCCCcE-EEEeC-------------
Q psy519 13 HFIQNSFKPETVEDVLANLESQ---K--NLQSRYLPYY----TSGHDMTVWSVEACSKGLA-LTGSR------------- 69 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~---~--~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~-~~~~~------------- 69 (351)
.+..++|||+ |++|++.+.+ + .|.+|++..+ ...+.. +..++|+|+|+. +.++.
T Consensus 60 ~~~~~~~SpD--g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 60 NATMPRISPD--GKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp SCEEEEECTT--SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred cCCCeEECCC--CCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 4677999999 9999887653 2 3777787765 223334 899999999976 55442
Q ss_pred --------------CCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCC-------cEEEEeCCCCceeEE
Q psy519 70 --------------DTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDK-------AVRLWSITDGASVRV 128 (351)
Q Consensus 70 --------------d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~ 128 (351)
...|++||+.+++.+..+.. . .+..+.|+|++ +++++..++ ...+|.+.+++. ..
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~ 212 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EK 212 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EE
Confidence 25799999998876445544 3 78899999999 777776542 334444434543 33
Q ss_pred eccCCCCeEEEEEccCCCEEEEEecCC-----CCCeEEEEEccCCceeEEeccCCCCEEE-EEECCCCcEEEEEcCCCeE
Q psy519 129 FSDHVSPVLSIAFSPCGKYLASGGTGS-----YDKAVRLWSITDGASVRVFSDHVSPVLS-IAFSPCGKYLASGGEDGLV 202 (351)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~dg~i 202 (351)
+..+ ..+..+ +|+|+.|+.++... ....|.+|| +++.......+...+.. +.|+ |+ ++++++.++.+
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~ 285 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSV 285 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence 4334 455544 99999988776411 124688888 55544444455677876 8999 88 88899999999
Q ss_pred EEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeE-EEEeCC
Q psy519 203 LTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTV-QFYGWP 251 (351)
Q Consensus 203 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i-~i~~~~ 251 (351)
++| +.+++..... .+...+.+++|+| .++++++.++.. .+|.+.
T Consensus 286 ~l~-~~~g~~~~~~--~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 286 NLY-IWDGEIKPIA--KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEE-EESSSEEEEE--CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EEE-EcCCceEEEe--cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 999 8766553333 3466799999999 677777776654 666665
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=1.1e-15 Score=130.71 Aligned_cols=226 Identities=14% Similarity=0.009 Sum_probs=162.4
Q ss_pred CccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCC----CcEEEEeCC
Q psy519 10 DHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRD----TTARLWSLE 79 (351)
Q Consensus 10 ~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d----~~i~vw~~~ 79 (351)
+...+.+++|+|+ |++++++..++.|.+|+.... ...+...+.+++++++|++ ++...+ +.|.+||.+
T Consensus 43 ~~~~~~~~~~~~~--g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 43 KGLQLEGLNFDRQ--GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp SCCCEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred cCccccCcEECCC--CCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 3445688999999 998888888899999998765 2245678999999999988 554455 589999998
Q ss_pred CCeeeEEee--CCCCCeEEEEEeCCCCEEEEEeC------CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEE
Q psy519 80 QMYPLRIFV--GHKQDVTCARFHPKITYIGTGSY------DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASG 151 (351)
Q Consensus 80 ~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 151 (351)
+++....+. .+...+..++++|+++++++... .+.|..+|..+++..... .....+..++|+|+++.++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEE
Confidence 876543332 24457899999999988776653 356777776655443322 233457899999999866555
Q ss_pred e-cCCCCCeEEEEEccC-CceeEE--------eccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC
Q psy519 152 G-TGSYDKAVRLWSITD-GASVRV--------FSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH 221 (351)
Q Consensus 152 ~-~~~~d~~i~i~d~~~-~~~~~~--------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 221 (351)
. . ++.|.+||+++ +..+.. +..+ ..+..++++++|+++++...++.|.+||. +++.+..+.....
T Consensus 200 ~~~---~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~ 274 (333)
T 2dg1_A 200 ETT---ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGR 274 (333)
T ss_dssp EGG---GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTG
T ss_pred eCC---CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCC
Confidence 3 4 78999999964 333221 1112 35788999999998888777889999998 5666666653321
Q ss_pred -----CCEEEEEEcCCCCEEEEEeCCC
Q psy519 222 -----EPVTSLVWSVTGETLVTGSLTG 243 (351)
Q Consensus 222 -----~~v~~~~~~~~~~~l~~~~~dg 243 (351)
..+.+++|+|+++.|++++.++
T Consensus 275 ~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 275 DEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp GGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred ccccccCcceEEECCCCCEEEEEeCcc
Confidence 1588999999987777665553
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=5.6e-16 Score=130.35 Aligned_cols=222 Identities=13% Similarity=0.039 Sum_probs=162.1
Q ss_pred ccceEEEEECCCCc-E-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeE
Q psy519 50 DMTVWSVEACSKGL-A-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVR 127 (351)
Q Consensus 50 ~~~i~~~~~~~~~~-~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 127 (351)
.....+++|+|++. + +++..++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.+||..+++...
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES 104 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE
Confidence 44567899999997 4 88888999999999887 55666677889999999999988877777899999998877544
Q ss_pred EeccC----CCCeEEEEEccCCCEEEEE----ec----------CCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCC
Q psy519 128 VFSDH----VSPVLSIAFSPCGKYLASG----GT----------GSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC 189 (351)
Q Consensus 128 ~~~~~----~~~i~~~~~~~~~~~l~~~----~~----------~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 189 (351)
..... ...+..++++|+|+++++. .. ....+.|..+|.. ++ ...+..+......++|+|+
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTT
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCC
Confidence 33211 2345679999999988873 21 0002456666654 43 3444455667889999999
Q ss_pred CcEEEEEcCCCeEEEEEcC-CCcE---EEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee----ec
Q psy519 190 GKYLASGGEDGLVLTHELT-TGRV---ISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIG----VY 261 (351)
Q Consensus 190 ~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~----~~ 261 (351)
++.+++.+.++.|.+|++. +++. ...+ ......+..++++++|+++++. ++.|.+|+.. ++.+... .+
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~ 258 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQTT 258 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSCC
T ss_pred CCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCCc
Confidence 9988777888999999997 4554 2333 2234567789999999976666 7899999987 5554432 25
Q ss_pred ceeEE-ecCCceeeeeecc
Q psy519 262 PRCAA-QPVGFEAATLAAN 279 (351)
Q Consensus 262 ~~~~~-s~~~~~~~~~~~~ 279 (351)
..++| +|++..+.+.+.+
T Consensus 259 ~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp CEEEEESTTSCEEEEEETT
T ss_pred eeEEEECCCCCEEEEEcCC
Confidence 67888 5888877777665
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=3.4e-15 Score=135.71 Aligned_cols=292 Identities=10% Similarity=-0.007 Sum_probs=200.1
Q ss_pred ceEEeeecCCccccEEEEecCCCceEEEecC--Cc-----cCCCccceEEEEEC----CCCcE--EEEeCCCcEEEEeCC
Q psy519 13 HFIQNSFKPETVEDVLANLESQKNLQSRYLP--YY-----TSGHDMTVWSVEAC----SKGLA--LTGSRDTTARLWSLE 79 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~--~~-----~~~~~~~i~~~~~~----~~~~~--~~~~~d~~i~vw~~~ 79 (351)
.+..+.|||+ |+++++++.++.|.+||+. +. ... ......++|+ |+|++ ++...++++.|+|..
T Consensus 198 ~p~~v~~SpD--Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 198 AVHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp CEEEEEECTT--SCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred CccceEECCC--CCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 4568999999 9999999999999999995 33 111 2235789999 69977 555567999999999
Q ss_pred CCeeeEEeeCC-----------CCCeEEEEEeCCCCEE-EEEeCCCcEEEEeCCCCceeEEe-ccCCCCeEEEEEccCCC
Q psy519 80 QMYPLRIFVGH-----------KQDVTCARFHPKITYI-GTGSYDKAVRLWSITDGASVRVF-SDHVSPVLSIAFSPCGK 146 (351)
Q Consensus 80 ~~~~~~~~~~~-----------~~~i~~i~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 146 (351)
+.+.+..+... ...+..+..++++..+ +....+|.|.++|....+.+... ........++.|+|+|+
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 99888776421 1257788888876544 44556799999998775432221 12345677899999999
Q ss_pred EEEEEecCCCCCeEEEEEccCCceeEEecc-----CCCCEEEEEECCCCcEE-EEEc-CCCeEEEEEcCC-------CcE
Q psy519 147 YLASGGTGSYDKAVRLWSITDGASVRVFSD-----HVSPVLSIAFSPCGKYL-ASGG-EDGLVLTHELTT-------GRV 212 (351)
Q Consensus 147 ~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l-~~~~-~dg~i~i~d~~~-------~~~ 212 (351)
+++++... ++.|.++|+.+++.+..+.. |.+.-..+ ++|++..+ +++. .++.|.++|..+ .+.
T Consensus 355 ~~~va~~~--sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 355 YFITAANA--RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp EEEEEEGG--GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred EEEEEeCC--CCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 98887643 78899999999987766643 32212222 57875544 4443 468999999987 567
Q ss_pred EEEeeccCCCCEEEEEEcCCCCEEEEEeC-------CCeEEEEeCCCC---------ceeee----------eecceeEE
Q psy519 213 ISRFHLQEHEPVTSLVWSVTGETLVTGSL-------TGTVQFYGWPSA---------SKIGI----------GVYPRCAA 266 (351)
Q Consensus 213 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------dg~i~i~~~~~~---------~~~~~----------~~~~~~~~ 266 (351)
++.+.... ..-..+..+|++++|.+... .+.|.++|+.+. +.+.. ..+..+.|
T Consensus 432 v~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (567)
T 1qks_A 432 LDSFPALG-GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEF 510 (567)
T ss_dssp EEEEECSC-SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEE
T ss_pred EEEEecCC-CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeE
Confidence 77776432 23345778999999988663 359999999876 22221 24467899
Q ss_pred ecCCceeeeeeccc--eeeEEEeeeceeCceEEEeeEEEEecCCcee
Q psy519 267 QPVGFEAATLAANS--RVRTLREMHEIVGPVVVVESFIVEIRPDKWY 311 (351)
Q Consensus 267 s~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 311 (351)
+|+|..+.+....+ ....+-++|..+++...........+|.|.|
T Consensus 511 ~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~~P~g~f 557 (567)
T 1qks_A 511 NKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDERLVTPTGKF 557 (567)
T ss_dssp CTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCSEEEEE
T ss_pred CCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCCCcccCCCeee
Confidence 99999876664432 2445666787777644333211133455544
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=8.4e-14 Score=116.92 Aligned_cols=253 Identities=8% Similarity=-0.111 Sum_probs=181.7
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeee
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~ 84 (351)
...+.++++.++ |.++++...++.|.+|+.... ...+...+..+++.++|.+ ++...++.|..+|.. ++..
T Consensus 19 ~~~p~~i~~d~~--g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 19 DSGPYGITSSED--GKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp TCCEEEEEECTT--SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCcceeeECCC--CCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE
Confidence 457789999999 998888777889999998733 2233467899999999988 555557889999988 5543
Q ss_pred E-EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEE-eccCCCCeEEEEEccCCCEEEEEecCCCCCeEEE
Q psy519 85 R-IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRL 162 (351)
Q Consensus 85 ~-~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i 162 (351)
. ........+.++++.++++++++...++.|..+|.. ++.... +......+.++++++++++.++... ++.|..
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---~~~i~~ 171 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQ---NNSIGR 171 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETT---TTEEEE
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecC---CCeEEE
Confidence 2 222234678999999999888877768899999987 554432 3334567899999999996666554 678999
Q ss_pred EEccCCceeEE-eccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeC
Q psy519 163 WSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSL 241 (351)
Q Consensus 163 ~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 241 (351)
||. +++.... .......+..+++++++++.++....+.|..||. +++............+.+++++++|++.++...
T Consensus 172 ~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 172 ITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred ECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccC
Confidence 998 5554432 2233456889999999988777777788999998 555443221123457899999999997777666
Q ss_pred CCeEEEEeCCCCceeee------eecceeEEecCCcee
Q psy519 242 TGTVQFYGWPSASKIGI------GVYPRCAAQPVGFEA 273 (351)
Q Consensus 242 dg~i~i~~~~~~~~~~~------~~~~~~~~s~~~~~~ 273 (351)
++.|..|+. +++.... ..+..+++.++|...
T Consensus 250 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 286 (300)
T 2qc5_A 250 ANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVW 286 (300)
T ss_dssp TTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEE
T ss_pred CCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEE
Confidence 799999998 4443321 234456777777643
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.76 E-value=9.6e-16 Score=127.25 Aligned_cols=208 Identities=15% Similarity=0.077 Sum_probs=165.8
Q ss_pred ccEEEEecCCCceEEEecCCc-----cCCCc-cceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCC-CCeEEE
Q psy519 25 EDVLANLESQKNLQSRYLPYY-----TSGHD-MTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHK-QDVTCA 97 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-----~~~~~-~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~i~~i 97 (351)
+++|++++.++.|.+||..++ +..+. ..+.++.++|+|+++. +.++.|..||. +++.+..+..+. ..+.++
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccccc
Confidence 688999999999999999666 33333 4688999999999855 56888999999 899998887653 578889
Q ss_pred EEeCCCCEEEEEeC-CCcEEEEeCCCCceeEEecc------CCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCce
Q psy519 98 RFHPKITYIGTGSY-DKAVRLWSITDGASVRVFSD------HVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGAS 170 (351)
Q Consensus 98 ~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~ 170 (351)
.+.++|+.+++.+. ++.+..+|. +++.+..+.. +......+++.++|+++++... ++.|..||.. ++.
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~---~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA---TSEVREIAPN-GQL 157 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT---TTEEEEECTT-SCE
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC---CCEEEEECCC-CCE
Confidence 99999999999887 788888885 6777666541 1123455678999999999887 9999999987 998
Q ss_pred eEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC-----CCEEEEEEcCCCCEEEEEe
Q psy519 171 VRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH-----EPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 171 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~ 240 (351)
+..+... ..+..+...++|++++++..++.|..+|..+++.+.++..... ..+..+...++|.++++..
T Consensus 158 ~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8888654 3455677889999999998888999999999999888753211 2378888899999888764
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=1.2e-15 Score=130.20 Aligned_cols=234 Identities=10% Similarity=-0.050 Sum_probs=169.5
Q ss_pred ceEEeeecCCccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEe
Q psy519 13 HFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIF 87 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~ 87 (351)
....+++. + +.++++...++.|.++|..+. ..........+++++++++ ++...++.|.+||+++++....+
T Consensus 45 ~~~~i~~~-~--~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 45 VAQSMVIR-D--GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp CEEEEEEE-T--TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred cceEEEEE-C--CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 34567774 3 456666667889999999876 1123466889999888877 55448999999999999887766
Q ss_pred eCCC-----CCeEEEEEeCCCCEEEEEe--CCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC---
Q psy519 88 VGHK-----QDVTCARFHPKITYIGTGS--YDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD--- 157 (351)
Q Consensus 88 ~~~~-----~~i~~i~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d--- 157 (351)
.... .....+++ . +..++++. .++.|.++|+.+++.+..+... .....++++|+|++++++.. +
T Consensus 122 ~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~---~~~~ 195 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDG---GYEG 195 (328)
T ss_dssp ECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCC---BCTT
T ss_pred EcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECC---CccC
Confidence 5433 13456777 3 44555554 4889999999999888777643 34567999999987666543 3
Q ss_pred -------CeEEEEEccCCceeEEeccC-CCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC-CCCEEEEE
Q psy519 158 -------KAVRLWSITDGASVRVFSDH-VSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQE-HEPVTSLV 228 (351)
Q Consensus 158 -------~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~ 228 (351)
+.|.++|..+++....+... ......++++|++++++++.. .|.+||..+++......... ...+..++
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLT 273 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEE
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEE
Confidence 68999999988877666432 236789999999999988765 89999998877542111121 35689999
Q ss_pred EcC-CCCEEEEE----eCCCeEEEEeCCCCceeee
Q psy519 229 WSV-TGETLVTG----SLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 229 ~~~-~~~~l~~~----~~dg~i~i~~~~~~~~~~~ 258 (351)
++| ++.+.++. ..++.|.+||.. ++.+..
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~ 307 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDE 307 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECCC-CCEEEE
Confidence 999 55555665 568999999988 776654
No 194
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=1.4e-15 Score=131.44 Aligned_cols=135 Identities=13% Similarity=0.086 Sum_probs=99.1
Q ss_pred CCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeC----------CCcEEEEeCCCCceeEEeccC------
Q psy519 69 RDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSY----------DKAVRLWSITDGASVRVFSDH------ 132 (351)
Q Consensus 69 ~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~------ 132 (351)
.|+.|.+||..+++.+..+..+..+ .++|+||++++++++. ++.|.+||..+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 3789999999999988888766655 8999999999998863 567999999998888776532
Q ss_pred CCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEE-eccCCCCEEEEEECCCC-cEEEEEcCCCeEEEEEcC
Q psy519 133 VSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRV-FSDHVSPVLSIAFSPCG-KYLASGGEDGLVLTHELT 208 (351)
Q Consensus 133 ~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~ 208 (351)
......++++|+|++|+++... .++.|.+||+.+++.+.. +... . ...+.+.|++ ..+++.+.||.+.+|+..
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~-~~~~v~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNAS-PATSIGIVDVAKGDYVEDVTAAA-G-CWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEES-SSEEEEEEETTTTEEEEEEGGGT-T-EEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred CCCcceEEECCCCCEEEEECCC-CCCeEEEEECCCCcEEEEEecCC-C-cceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 2345679999999999988641 147899999999988777 5432 1 2224455544 455555566666666654
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=1.3e-15 Score=126.09 Aligned_cols=230 Identities=11% Similarity=-0.029 Sum_probs=159.3
Q ss_pred ceEEEEECCCCcE-E-EEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe
Q psy519 52 TVWSVEACSKGLA-L-TGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF 129 (351)
Q Consensus 52 ~i~~~~~~~~~~~-~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 129 (351)
...+++++++|.+ + +...++.|.+|+..+.........+...+.++++.++++++++.. ++.|..||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 6788999999988 5 436789999999876543322223335678899999998666655 889999998765433222
Q ss_pred ccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCC
Q psy519 130 SDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTT 209 (351)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 209 (351)
......+.+++++|+|+++++... ++.|.+||..+.............+..++++|+|+++++...++.|.+||...
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGG---GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred cCCcCCCcceEECCCCCEEEEECC---CCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 223367899999999987777655 78999998655543332222334567899999999777777788999999876
Q ss_pred CcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-----eecceeEEecCCceeeeeeccceeeE
Q psy519 210 GRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAANSRVRT 284 (351)
Q Consensus 210 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~ 284 (351)
...... .......+..++++++|.++++...++.|.+|+......... .....++++|+|...++...++.+..
T Consensus 181 ~~~~~~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~ 259 (270)
T 1rwi_B 181 NNQVVL-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVK 259 (270)
T ss_dssp CCEEEC-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred CceEee-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEE
Confidence 654432 222336789999999998777777789999999876543321 23456888999876555555555444
Q ss_pred EE
Q psy519 285 LR 286 (351)
Q Consensus 285 ~~ 286 (351)
++
T Consensus 260 ~~ 261 (270)
T 1rwi_B 260 LT 261 (270)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.75 E-value=2.2e-16 Score=149.50 Aligned_cols=245 Identities=11% Similarity=0.007 Sum_probs=164.9
Q ss_pred cCCCCccceEEeeecCCccccEEEEecCC-----CceEEEecCCc--cCCCccc--eEEEEECCCCcE-EEEeCCCc---
Q psy519 6 LNHGDHKHFIQNSFKPETVEDVLANLESQ-----KNLQSRYLPYY--TSGHDMT--VWSVEACSKGLA-LTGSRDTT--- 72 (351)
Q Consensus 6 ~~~~~~~~v~~~~~sp~~~~~~l~~~~~~-----~~i~i~~~~~~--~~~~~~~--i~~~~~~~~~~~-~~~~~d~~--- 72 (351)
+..+|...+..++|||| |++||.+..+ ..|++||+.++ ...+... +..++|+|| +. +.++.++.
T Consensus 157 l~~~~~~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 157 WAKDGATALDAWAASDD--GRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp CC----EEEEEEEECTT--SSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC---
T ss_pred hccCCCEEEEeEEECCC--CCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccc
Confidence 44555557888999999 9999987553 46999999887 2222222 257899999 65 66655443
Q ss_pred -----------EEEEeCCCCee--eEEeeC--CCCCeEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCC--ceeEEec
Q psy519 73 -----------ARLWSLEQMYP--LRIFVG--HKQDVTCARFHPKITYIGTGSYDK-----AVRLWSITDG--ASVRVFS 130 (351)
Q Consensus 73 -----------i~vw~~~~~~~--~~~~~~--~~~~i~~i~~~~~~~~l~~~~~dg-----~i~i~d~~~~--~~~~~~~ 130 (351)
|++|++.+++. ...+.. +...+..+.|+|||++|+..+.++ .|++||+.++ +....+.
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 89999987652 223332 333588999999999888777543 8999999876 3144454
Q ss_pred cCCCCeEEEEEccCCCEEEEEecCC-CCCeEEEEEccCC--ceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEc
Q psy519 131 DHVSPVLSIAFSPCGKYLASGGTGS-YDKAVRLWSITDG--ASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHEL 207 (351)
Q Consensus 131 ~~~~~i~~~~~~~~~~~l~~~~~~~-~d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 207 (351)
.+........ +|+|+.|+..+... .++.|.+||+.++ +....+..+...+..+.++ ++.++++...++..++|.+
T Consensus 314 ~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 314 PDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp CSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 4555555553 48898888776521 2456999999875 2333344444556677887 6677888888887777655
Q ss_pred C-CCcEEEEeeccCCCCEEEEEEcCCCCEEEEE----eCCCeEEEEeCCCCce
Q psy519 208 T-TGRVISRFHLQEHEPVTSLVWSVTGETLVTG----SLTGTVQFYGWPSASK 255 (351)
Q Consensus 208 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~dg~i~i~~~~~~~~ 255 (351)
. ++.....+.......+..+.++|+++.|+.. ...++|++||+.+++.
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 4 4666666654445678899999998766532 2347899999988764
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.74 E-value=5.8e-15 Score=125.02 Aligned_cols=233 Identities=11% Similarity=-0.002 Sum_probs=167.1
Q ss_pred cceEEeeecCCccccEEEE-------ecCCCceEEEecCCc----cC-----CCccceEEEEECCC-CcEEEEeCCCcEE
Q psy519 12 KHFIQNSFKPETVEDVLAN-------LESQKNLQSRYLPYY----TS-----GHDMTVWSVEACSK-GLALTGSRDTTAR 74 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~-------~~~~~~i~i~~~~~~----~~-----~~~~~i~~~~~~~~-~~~~~~~~d~~i~ 74 (351)
....+++|+++ +.++++ ...++.|..|+..+. .. ++...+.+++++++ |.+..+...+.|.
T Consensus 18 ~~~~~~~~~~~--g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~ 95 (314)
T 1pjx_A 18 PGAEGPVFDKN--GDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLL 95 (314)
T ss_dssp TTCEEEEECTT--SCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEE
T ss_pred CCccCceECCC--CCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEE
Confidence 34578999999 988887 567889999997655 11 24567899999999 8875555555899
Q ss_pred EEeCCCCeeeEE-eeC----CCCCeEEEEEeCCCCEEEEEeCC---------------CcEEEEeCCCCceeEEeccCCC
Q psy519 75 LWSLEQMYPLRI-FVG----HKQDVTCARFHPKITYIGTGSYD---------------KAVRLWSITDGASVRVFSDHVS 134 (351)
Q Consensus 75 vw~~~~~~~~~~-~~~----~~~~i~~i~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~~~~~ 134 (351)
+||.+ ++.... ... ....+.++++.++++++++...+ +.|..+|.. ++..... .+..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCC
Confidence 99988 665433 221 12357899999999887776554 567788765 5543332 2334
Q ss_pred CeEEEEEc----cCCCEEEEEecCCCCCeEEEEEcc-CCc-----eeEEeccCC-CCEEEEEECCCCcEEEEEcCCCeEE
Q psy519 135 PVLSIAFS----PCGKYLASGGTGSYDKAVRLWSIT-DGA-----SVRVFSDHV-SPVLSIAFSPCGKYLASGGEDGLVL 203 (351)
Q Consensus 135 ~i~~~~~~----~~~~~l~~~~~~~~d~~i~i~d~~-~~~-----~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~ 203 (351)
....++++ |+++.++++... ++.|.+||+. +++ ....+..+. ..+..++++++|+++++...++.|.
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETP--TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETT--TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CcceEEEecccCCCCCEEEEEECC--CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 56889999 999776655421 7899999986 443 222333333 5578899999999888877788999
Q ss_pred EEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEE-EeCCCeEEEEeCCC
Q psy519 204 THELTTGRVISRFHLQEHEPVTSLVWSVTGETLVT-GSLTGTVQFYGWPS 252 (351)
Q Consensus 204 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~~~~~ 252 (351)
+||..+++....+.. +...+.+++|+|+++.|++ ...++.|..|++..
T Consensus 251 ~~d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCCcEeEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999987776666643 3367899999999995554 45568999999875
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=2.9e-15 Score=124.38 Aligned_cols=209 Identities=12% Similarity=0.023 Sum_probs=162.1
Q ss_pred CCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCC-CCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccC-CCCe
Q psy519 59 CSKGLALTGSRDTTARLWSLEQMYPLRIFVGHK-QDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDH-VSPV 136 (351)
Q Consensus 59 ~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i 136 (351)
+|+..+++++.++.|.+||.++++.+..+..+. ..+.++.+.|+|++++ +.++.|+.||. +++.+..+... ...+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 345455899999999999999999999998766 4688999999999888 45788999998 89998888764 3578
Q ss_pred EEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEecc------CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCC
Q psy519 137 LSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSD------HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTG 210 (351)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 210 (351)
.++.+.|+|+++++.+.. ++.+..+|. +++.+..+.. +......+++.++|+++++...++.|..||.. |
T Consensus 80 ~~~~~~~dG~~lv~~~~~--~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 80 QTARILPDGNALVAWCGH--PSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEECTTSCEEEEEEST--TEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccEECCCCCEEEEecCC--CCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 899999999999886521 456777775 6777766542 11234456788999999999999999999997 9
Q ss_pred cEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-----------cceeEEecCCceeeee
Q psy519 211 RVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGV-----------YPRCAAQPVGFEAATL 276 (351)
Q Consensus 211 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-----------~~~~~~s~~~~~~~~~ 276 (351)
+.+.++... ..+.++...++|++++++..+++|..+|..+++.+-... +..+...++|..+++.
T Consensus 156 ~~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 156 QLLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CEEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CEEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 988887643 456678888999999999888899999999888865432 2334555666655544
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.73 E-value=1.1e-13 Score=116.12 Aligned_cols=231 Identities=6% Similarity=-0.052 Sum_probs=168.3
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeee
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~ 84 (351)
...+..++++|+ |.++++...++.|..|+.... .......+..+++.++|.+ ++...++.|.+||. +++..
T Consensus 56 ~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 56 DAKVMCLTISSD--GEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp TCCEEEEEECTT--SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cCceeeEEECCC--CCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 466889999999 998888777888999987644 1224557899999999988 66666889999998 55443
Q ss_pred EE-eeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEE-eccCCCCeEEEEEccCCCEEEEEecCCCCCeEEE
Q psy519 85 RI-FVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRL 162 (351)
Q Consensus 85 ~~-~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i 162 (351)
.. ...+...+..+++.++++++++...++.|..||. +++.... .......+.+++++++|++.++... ++.|..
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~ 208 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEII---GNKIGR 208 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT---TTEEEE
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccC---CceEEE
Confidence 22 2234557899999999988877777789999998 6655433 3334566889999999987776655 789999
Q ss_pred EEccCCceeEE-eccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc-CCCCEEEEEEcCCCCEEEEEe
Q psy519 163 WSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ-EHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 163 ~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 240 (351)
||. +++.... ...+...+..++++++|+++++...++.|..||. +++ +..+... +...+.++++ +++.+.++..
T Consensus 209 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 209 ITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAME 284 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEET
T ss_pred ECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEec
Confidence 998 6654332 2334567899999999997777667889999998 454 3344322 2357899999 8888776655
Q ss_pred CCCeEEEEeCCCC
Q psy519 241 LTGTVQFYGWPSA 253 (351)
Q Consensus 241 ~dg~i~i~~~~~~ 253 (351)
.+.+..++.+++
T Consensus 285 -~~~l~~~~~~~~ 296 (299)
T 2z2n_A 285 -CDKIGKLTLIKD 296 (299)
T ss_dssp -TTEEEEEEEC--
T ss_pred -CCcEEEEEcCcc
Confidence 577777777654
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.73 E-value=5.1e-15 Score=140.18 Aligned_cols=272 Identities=10% Similarity=0.042 Sum_probs=174.9
Q ss_pred ecCCccccEEEEecCCCc---eEEEecC-----Cc-----------cCCCccceEEEEECCCCcE-EEEeC-C----CcE
Q psy519 19 FKPETVEDVLANLESQKN---LQSRYLP-----YY-----------TSGHDMTVWSVEACSKGLA-LTGSR-D----TTA 73 (351)
Q Consensus 19 ~sp~~~~~~l~~~~~~~~---i~i~~~~-----~~-----------~~~~~~~i~~~~~~~~~~~-~~~~~-d----~~i 73 (351)
.+|+ |++++....++. -.+|... .. ..+|...+..++|+|||++ +.+.. + ..|
T Consensus 114 p~pd--G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i 191 (741)
T 1yr2_A 114 PQRR--GASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTV 191 (741)
T ss_dssp CEEE--TTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEE
T ss_pred CEEE--CCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEE
Confidence 3488 888887654432 4445432 22 1223347889999999987 44433 2 369
Q ss_pred EEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCc--------------EEEEeCCCCce--eEEec--cCCCC
Q psy519 74 RLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKA--------------VRLWSITDGAS--VRVFS--DHVSP 135 (351)
Q Consensus 74 ~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~--------------i~i~d~~~~~~--~~~~~--~~~~~ 135 (351)
++||+.+++.+... .+...+..++|+|| +.|+.++.++. |++|++.++.. ...+. .+...
T Consensus 192 ~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 192 KFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp EEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred EEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 99999999875432 12222357899999 98888876654 89999977652 22232 23345
Q ss_pred eEEEEEccCCCEEEEEecCC--CCCeEEEEEccCC--ceeEEeccCCCCEEEEEECCCCcEEEEEcC----CCeEEEEEc
Q psy519 136 VLSIAFSPCGKYLASGGTGS--YDKAVRLWSITDG--ASVRVFSDHVSPVLSIAFSPCGKYLASGGE----DGLVLTHEL 207 (351)
Q Consensus 136 i~~~~~~~~~~~l~~~~~~~--~d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~ 207 (351)
+..+.|+|||++|+...... ....|++||+.++ +....+..+........ +|+|+.|+..+. ++.|.+||+
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeC
Confidence 88999999999988877511 1348999999877 31445545554455543 488888887765 456999999
Q ss_pred CCC-cEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeee------eecceeEEecCCceeee-eec
Q psy519 208 TTG-RVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWP-SASKIGI------GVYPRCAAQPVGFEAAT-LAA 278 (351)
Q Consensus 208 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~------~~~~~~~~s~~~~~~~~-~~~ 278 (351)
.++ .....+...+...+..+.|+ ++.++++...|+..++|.+. +++.... ..+..+.++|++..++. ..+
T Consensus 349 ~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss 427 (741)
T 1yr2_A 349 SGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSS 427 (741)
T ss_dssp SSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEE
T ss_pred CCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcC
Confidence 875 23344432333456678887 56677888888877776554 3443332 23345778898876554 445
Q ss_pred cceeeEEEeeeceeCceE
Q psy519 279 NSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 279 ~~~~~~~~~~~~~~g~~~ 296 (351)
......+..|+..+|+..
T Consensus 428 ~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 428 FTQPATVLALDPATAKTT 445 (741)
T ss_dssp TTEEEEEEEEETTTTEEE
T ss_pred CCCCCEEEEEECCCCcEE
Confidence 566778888988777643
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.71 E-value=4.1e-14 Score=118.96 Aligned_cols=228 Identities=12% Similarity=0.020 Sum_probs=157.7
Q ss_pred CCCCccceEEeeecCCccccEEEEecCCCceEEEecCCc---cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCee
Q psy519 7 NHGDHKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYP 83 (351)
Q Consensus 7 ~~~~~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~ 83 (351)
...+..-.-...|+|+. +.++++...++.|..|+.... .......+.+++++++|.++.+. ++.|.+||.++++.
T Consensus 8 ~~~~~~~~Egp~w~~~~-~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVS-NSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSA 85 (297)
T ss_dssp ECCCCSBEEEEEEETTT-TEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEE
T ss_pred eccCCccccCCeEECCC-CEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcE
Confidence 33344445678999961 456666667889999998765 22345678999999999985555 57899999988765
Q ss_pred eEEeeC----CCCCeEEEEEeCCCCEEEEEeC-----------CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEE
Q psy519 84 LRIFVG----HKQDVTCARFHPKITYIGTGSY-----------DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYL 148 (351)
Q Consensus 84 ~~~~~~----~~~~i~~i~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 148 (351)
...... ....+..++++|+|+++++... .+.|+.++.. ++... +.........++|+|+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEE
Confidence 433322 1235788999999997665422 1344444432 33322 32334456889999999977
Q ss_pred EEEecCCCCCeEEEEEc--cCCce-----eEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC
Q psy519 149 ASGGTGSYDKAVRLWSI--TDGAS-----VRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH 221 (351)
Q Consensus 149 ~~~~~~~~d~~i~i~d~--~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 221 (351)
+.+... ++.|..||+ .++.. ...+......+..++++++|++.++...++.|..||..+++.+..+... .
T Consensus 164 yv~~~~--~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p-~ 240 (297)
T 3g4e_A 164 YYIDSL--SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP-V 240 (297)
T ss_dssp EEEEGG--GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS-S
T ss_pred EEecCC--CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC-C
Confidence 665431 688999997 44542 2222333456789999999988888777889999999889988887643 3
Q ss_pred CCEEEEEEc-CCCCEEEEEeC
Q psy519 222 EPVTSLVWS-VTGETLVTGSL 241 (351)
Q Consensus 222 ~~v~~~~~~-~~~~~l~~~~~ 241 (351)
..+.+++|. |+++.|++++.
T Consensus 241 ~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 241 DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SBEEEEEEESGGGCEEEEEEB
T ss_pred CCceEEEEeCCCCCEEEEEcC
Confidence 578999998 88887766554
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=2.4e-13 Score=119.30 Aligned_cols=228 Identities=10% Similarity=0.049 Sum_probs=157.0
Q ss_pred cceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCC--cEEEEeCCCCceeE
Q psy519 51 MTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDK--AVRLWSITDGASVR 127 (351)
Q Consensus 51 ~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~ 127 (351)
.....++|++++.+ ++...++.|++||.++++.......... .. ++|+|+++.|+++..++ .|..++...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 46789999999988 6666678999999998876655544333 33 99999999998888766 79999987665443
Q ss_pred Ee----ccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEE----eccCCCCE-E-EEEECCC-CcEEEEE
Q psy519 128 VF----SDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRV----FSDHVSPV-L-SIAFSPC-GKYLASG 196 (351)
Q Consensus 128 ~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~i-~-~~~~~~~-~~~l~~~ 196 (351)
.+ ......+.+++++|++..|+++.. ++.|+.||..++..... .......- . .++|+|+ +.++++-
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDS---NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECT---TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEEC---CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 43 224466788999996556666655 88999999987653322 21222222 3 8999995 6666666
Q ss_pred cCCCeEEEEEcCCCcEEEEeeccC--------------CCCEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeeee--
Q psy519 197 GEDGLVLTHELTTGRVISRFHLQE--------------HEPVTSLVWSVTGETLVTGS-LTGTVQFYGWPSASKIGIG-- 259 (351)
Q Consensus 197 ~~dg~i~i~d~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~-- 259 (351)
..++.|+.|+.... . ..+.... -.....++++++|+++++-. .+++|+.|++.+++.....
T Consensus 286 ~~~~~I~~~~~~g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp TTTTEEEEECTTCC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEecCCC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCC
Confidence 77889999997543 2 2221111 13488999999999777877 7899999998777644321
Q ss_pred -----------------ecceeEEecCCceeeeeeccceeeEE
Q psy519 260 -----------------VYPRCAAQPVGFEAATLAANSRVRTL 285 (351)
Q Consensus 260 -----------------~~~~~~~s~~~~~~~~~~~~~~~~~~ 285 (351)
....++++|+|..+++-..+.+++.+
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 23356777776655555555554444
No 203
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.66 E-value=2.1e-14 Score=134.84 Aligned_cols=248 Identities=12% Similarity=0.049 Sum_probs=167.5
Q ss_pred CCCCcCCCCccceEEeeecCCccccEEEEec-----CCCceEEEecCCc--cCCCccce--EEEEECCCCcE-EEEeCCC
Q psy519 2 DLSHLNHGDHKHFIQNSFKPETVEDVLANLE-----SQKNLQSRYLPYY--TSGHDMTV--WSVEACSKGLA-LTGSRDT 71 (351)
Q Consensus 2 ~~~~~~~~~~~~v~~~~~sp~~~~~~l~~~~-----~~~~i~i~~~~~~--~~~~~~~i--~~~~~~~~~~~-~~~~~d~ 71 (351)
|.-.+..+|...+..++|||| |++||.+. ....|++||+.++ ...+...+ ..++|+ ||+. +.+..+.
T Consensus 119 D~n~la~~~~~~l~~~~~SpD--g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 119 DPNTLSPDGTTALDQLSFSRD--GRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp CGGGGSTTSCCEEEEEEECTT--SSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSC
T ss_pred ehhhccCCCcEEEEEEEECCC--CCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecC
Confidence 344556677778899999999 99998543 3357999999887 22232333 567899 9875 6666553
Q ss_pred -------------cEEEEeCCCCee--eEEee--C-CCCCeEEEEEeCCCCEEEEEeC----CCcEEEEeCCCCc-eeEE
Q psy519 72 -------------TARLWSLEQMYP--LRIFV--G-HKQDVTCARFHPKITYIGTGSY----DKAVRLWSITDGA-SVRV 128 (351)
Q Consensus 72 -------------~i~vw~~~~~~~--~~~~~--~-~~~~i~~i~~~~~~~~l~~~~~----dg~i~i~d~~~~~-~~~~ 128 (351)
.|++|++.+.+. ...+. . |......+.|+|||++|+.... ...|+++|+.++. ....
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 399999987642 22332 2 3445778999999998865432 3589999998764 3445
Q ss_pred eccCCCCeEEEEEccCCCEEEEEec-CCCCCeEEEEEccCCce--eEEeccCCCCEEEEEECCCCcEEEEEcC-CC--eE
Q psy519 129 FSDHVSPVLSIAFSPCGKYLASGGT-GSYDKAVRLWSITDGAS--VRVFSDHVSPVLSIAFSPCGKYLASGGE-DG--LV 202 (351)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~l~~~~~-~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i 202 (351)
+..+....... ++++|..|+..+. ....+.|..+|+.++.. ...+..+...+. .|+++++.|+.... ++ .|
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEE
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEE
Confidence 55555555555 6666666655443 11246899999987654 345555555554 88998888776654 43 68
Q ss_pred EEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCcee
Q psy519 203 LTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLT----GTVQFYGWPSASKI 256 (351)
Q Consensus 203 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~~~~~~~~~ 256 (351)
++||+. +.....+.......+..+.++++++.++....+ +.++.||+.+++..
T Consensus 353 ~~~d~~-g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 353 EQFDYE-GKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp EEECTT-SCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred EEEECC-CCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 899987 445555655555667788888888866655444 89999999887644
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=2.7e-12 Score=111.08 Aligned_cols=266 Identities=8% Similarity=-0.077 Sum_probs=174.7
Q ss_pred eeecCCccccEEEEecC--CC---ceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEe----------CCCcEEE
Q psy519 17 NSFKPETVEDVLANLES--QK---NLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGS----------RDTTARL 75 (351)
Q Consensus 17 ~~~sp~~~~~~l~~~~~--~~---~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~----------~d~~i~v 75 (351)
+...|+ +.++.+... .. .|.++|..+. ......+ .++++|||++ +.+. .++.|.+
T Consensus 26 ~~~~~~--~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 26 EAPGAD--GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred ccCCCC--CCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 455577 777766553 23 7899998876 2222222 8999999987 4433 3678999
Q ss_pred EeCCCCeeeEEeeCC-------CCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEE-eccCCCCeEEEEEccCC
Q psy519 76 WSLEQMYPLRIFVGH-------KQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRV-FSDHVSPVLSIAFSPCG 145 (351)
Q Consensus 76 w~~~~~~~~~~~~~~-------~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~ 145 (351)
||..+.+.+..+... ......++|+|||++|++++. ++.|.++| .+++.+.. +.. .. ++.+.|++
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~ 176 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGA 176 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCC
Confidence 999998877766432 123458999999999998874 47899999 99988877 542 22 24455655
Q ss_pred C-EEEEEecCCCCCeEEEEEccCCceeEEec-----cCCCCE-EEEEECCCCcEEEEEcCCCeEEEEEcCCCc--EEEEe
Q psy519 146 K-YLASGGTGSYDKAVRLWSITDGASVRVFS-----DHVSPV-LSIAFSPCGKYLASGGEDGLVLTHELTTGR--VISRF 216 (351)
Q Consensus 146 ~-~l~~~~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~ 216 (351)
+ .+++.+. |+.+.++|. +++...... ....++ ....+.+++..++..+..+.+.+.|+.... .+..+
T Consensus 177 ~~~~~~~~~---dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 177 PSTFYLLCA---QGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPI 252 (373)
T ss_pred CceEEEEcC---CCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeee
Confidence 4 4444445 999999999 777663322 112222 234566666555544567899999987543 22333
Q ss_pred eccC---------CCCEEEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCceeeeee----cceeEEecCCcee
Q psy519 217 HLQE---------HEPVTSLVWSVTGETLVTGSL----------TGTVQFYGWPSASKIGIGV----YPRCAAQPVGFEA 273 (351)
Q Consensus 217 ~~~~---------~~~v~~~~~~~~~~~l~~~~~----------dg~i~i~~~~~~~~~~~~~----~~~~~~s~~~~~~ 273 (351)
.... ......+.++|+++.++++.. .+.|.++|..+++.+.... ...++|+|||+.+
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~ 332 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPD 332 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeE
Confidence 2111 122445789999998877653 3589999999998876633 5679999999944
Q ss_pred eeeeccceeeEEEeeeceeCceE
Q psy519 274 ATLAANSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~g~~~ 296 (351)
++.+..+ ...+.+++..+++..
T Consensus 333 l~v~~~~-~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 333 LYALSAG-TEVLHIYDAGAGDQD 354 (373)
T ss_pred EEEEcCC-CCeEEEEECCCCCEE
Confidence 3333311 246777777777744
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.65 E-value=3.1e-13 Score=118.60 Aligned_cols=232 Identities=6% Similarity=-0.009 Sum_probs=160.4
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcE-EEEeCCC--cEEEEeCCCCeee
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLA-LTGSRDT--TARLWSLEQMYPL 84 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~-~~~~~d~--~i~vw~~~~~~~~ 84 (351)
.....++|+|+ +.++++...++.|+.|+.... ......... ++|++++.. +.+..++ .|.+++..++...
T Consensus 131 ~~P~~la~d~~--g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGN--NTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECST--TEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCC--CCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 46788999999 998888877899999999865 111122233 899999976 6666655 7889988765443
Q ss_pred EEe----eCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEE----eccCCCCe-E-EEEEccCCCEEEEEecC
Q psy519 85 RIF----VGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRV----FSDHVSPV-L-SIAFSPCGKYLASGGTG 154 (351)
Q Consensus 85 ~~~----~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~i-~-~~~~~~~~~~l~~~~~~ 154 (351)
..+ ......+.+++++|++..|+.+..++.|+.||..++..... ..+....- . .++|+|++..|+.+...
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 333 22445678899999555565677788999999987653322 22222222 2 89999965555554331
Q ss_pred CCCCeEEEEEccCCceeEEeccC---------------CCCEEEEEECCCCcEEEEEc-CCCeEEEEEcCCCcEEEEeec
Q psy519 155 SYDKAVRLWSITDGASVRVFSDH---------------VSPVLSIAFSPCGKYLASGG-EDGLVLTHELTTGRVISRFHL 218 (351)
Q Consensus 155 ~~d~~i~i~d~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~ 218 (351)
++.|+.||.... ...+.++ -.....++++|+|+++++-. .++.|+.|++.++........
T Consensus 288 --~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 288 --LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp --TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEEC
T ss_pred --CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCC
Confidence 788999997543 2223222 13478999999999888877 889999999877764433211
Q ss_pred c-------------CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy519 219 Q-------------EHEPVTSLVWSVTGETLVTGSLTGTVQFYGW 250 (351)
Q Consensus 219 ~-------------~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~ 250 (351)
. .-..+..+++++++.++++-..+++|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 0 0135899999999888888888889988765
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.65 E-value=1.4e-12 Score=112.93 Aligned_cols=255 Identities=11% Similarity=-0.037 Sum_probs=169.6
Q ss_pred cEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEe----------CCCcEEEEeCCCCceeEEeccC-------CC
Q psy519 72 TARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGS----------YDKAVRLWSITDGASVRVFSDH-------VS 134 (351)
Q Consensus 72 ~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~-------~~ 134 (351)
.|.++|..+++.+..+.....+ .++++||+++++++. .++.|.+||..+.+.+..+.-. ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 8899999999988877654444 899999999998886 3678999999988877765422 12
Q ss_pred CeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEE-eccCCCCEEEEEECCCC-cEEEEEcCCCeEEEEEcCCCcE
Q psy519 135 PVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRV-FSDHVSPVLSIAFSPCG-KYLASGGEDGLVLTHELTTGRV 212 (351)
Q Consensus 135 ~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~ 212 (351)
....++|+|||++|+++... .++.|.++| .+++.+.. +... . ++.+.|++ +.+++.+.||.+.++|. +++.
T Consensus 126 ~p~~~~~spDG~~l~v~n~~-~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFA-AGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred CccceEECCCCCEEEEEecC-CCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcE
Confidence 34579999999999988641 147899999 99988877 6432 2 24455655 45667778999999999 8776
Q ss_pred EEEeec----cCCCC-EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--eeee---------------cceeEEecCC
Q psy519 213 ISRFHL----QEHEP-VTSLVWSVTGETLVTGSLTGTVQFYGWPSASKI--GIGV---------------YPRCAAQPVG 270 (351)
Q Consensus 213 ~~~~~~----~~~~~-v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~--~~~~---------------~~~~~~s~~~ 270 (351)
...... ....+ .....+.+++..++..+..+.+.+.|+.+.... .... ...++++|++
T Consensus 199 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~ 278 (373)
T 2mad_H 199 AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSS 278 (373)
T ss_pred EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCC
Confidence 643221 11122 233556676665555557889999999765321 1110 1126788888
Q ss_pred ceeeeeeccc-------eeeEEEeeeceeCceEE-Ee----eEEEEecCCceeeccEEE-ecCCccccceeeeeeeee
Q psy519 271 FEAATLAANS-------RVRTLREMHEIVGPVVV-VE----SFIVEIRPDKWYEANLIV-LDDDLKECNLETYSQMIP 335 (351)
Q Consensus 271 ~~~~~~~~~~-------~~~~~~~~~~~~g~~~~-~~----~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~ 335 (351)
..+.+....+ ....+.+.+..+++... +. ...+.|+||+.+..-... .++.+..+|.++.+....
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 8766655422 12345566666655422 11 123689999884322223 478899999998877655
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=2.3e-12 Score=108.05 Aligned_cols=228 Identities=6% Similarity=-0.030 Sum_probs=164.3
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeee
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~ 84 (351)
...+..++++++ +.++++...++.|..++.... .......+.++++.++|.+ ++...++.|..++.+ ++..
T Consensus 61 ~~~~~~i~~~~~--g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 61 DAKVMCLIVSSL--GDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp TCCEEEEEECTT--SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCcceeEEECCC--CCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 356788999999 988887776788999987743 2223467899999999988 655557899999987 5544
Q ss_pred EE-eeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEE-eccCCCCeEEEEEccCCCEEEEEecCCCCCeEEE
Q psy519 85 RI-FVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRL 162 (351)
Q Consensus 85 ~~-~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i 162 (351)
.. +......+.++++.+++++.++...++.|..+|. +++.... .......+.+++++++|++.++... .+.|..
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---~~~i~~ 213 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIM---GNKIGR 213 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT---TTEEEE
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccC---CCEEEE
Confidence 22 2334567899999999997776666788999998 5554432 2234457889999999987776555 678999
Q ss_pred EEccCCceeEE-eccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc-CCCCEEEEEEcCCCCEEEEEe
Q psy519 163 WSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ-EHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 163 ~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 240 (351)
||. +++.... .......+..++++++|++.++...++.|..||. +++.. .+... ....+.+++++++|++.++..
T Consensus 214 ~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 214 ITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred EcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEcc
Confidence 998 5544332 3334567889999999997777767789999998 45433 33322 335688999999998666654
Q ss_pred CCCeEEEEeC
Q psy519 241 LTGTVQFYGW 250 (351)
Q Consensus 241 ~dg~i~i~~~ 250 (351)
. .|..+|.
T Consensus 291 -~-~i~~~~p 298 (300)
T 2qc5_A 291 -C-KIGKLNL 298 (300)
T ss_dssp -S-EEEEEEE
T ss_pred -C-ceEEeCC
Confidence 4 7777764
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.64 E-value=8.5e-13 Score=112.42 Aligned_cols=218 Identities=14% Similarity=0.020 Sum_probs=150.1
Q ss_pred eEEeeecCCcccc-EEEEecCCCceEEEecCCc---cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeC
Q psy519 14 FIQNSFKPETVED-VLANLESQKNLQSRYLPYY---TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVG 89 (351)
Q Consensus 14 v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~ 89 (351)
....+|+|+ ++ ++++...++.|..|+.... .......+.+++|+++|+++.++.+ .|.+||.++++.......
T Consensus 51 ~egp~~~~~--~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 51 GEGPTFDPA--SGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEEETT--TTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECS
T ss_pred CcCCeEeCC--CCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeC
Confidence 456899997 54 5556666789999998765 1123467899999999998555544 499999988775433221
Q ss_pred ----CCCCeEEEEEeCCCCEEEEEeC------CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 90 ----HKQDVTCARFHPKITYIGTGSY------DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 90 ----~~~~i~~i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
....+..++++|+|+++++... .+.|..++ +++... +.........++|+|+++.++.+... ++.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~--~~~ 202 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTK--VNR 202 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETT--TCE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECC--CCE
Confidence 1235789999999987665432 24566666 454333 32233456789999999987665431 688
Q ss_pred EEEEEcc--CC-ce-----eEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEc-
Q psy519 160 VRLWSIT--DG-AS-----VRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWS- 230 (351)
Q Consensus 160 i~i~d~~--~~-~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~- 230 (351)
|.+||+. ++ .. ...+......+..+++.++|++.++...++.|..||. +++.+..+.. ....+.+++|+
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~-~~~~~~~~af~g 280 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV-PGKQTTCPAFIG 280 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC-SCSBEEEEEEES
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC-CCCCcEEEEEec
Confidence 9999986 55 31 2223223455778999999987777766788999998 6777766653 33569999998
Q ss_pred CCCCEEEEEeC
Q psy519 231 VTGETLVTGSL 241 (351)
Q Consensus 231 ~~~~~l~~~~~ 241 (351)
++++.|++++.
T Consensus 281 ~d~~~L~vt~~ 291 (326)
T 2ghs_A 281 PDASRLLVTSA 291 (326)
T ss_dssp TTSCEEEEEEB
T ss_pred CCCCEEEEEec
Confidence 88887755543
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=8e-13 Score=111.78 Aligned_cols=221 Identities=9% Similarity=0.002 Sum_probs=150.4
Q ss_pred cceEEEEECCCCcE-EE-------EeCCCcEEEEeCCCCeeeEEee----CCCCCeEEEEEeCC-CCEEEEEeCCCcEEE
Q psy519 51 MTVWSVEACSKGLA-LT-------GSRDTTARLWSLEQMYPLRIFV----GHKQDVTCARFHPK-ITYIGTGSYDKAVRL 117 (351)
Q Consensus 51 ~~i~~~~~~~~~~~-~~-------~~~d~~i~vw~~~~~~~~~~~~----~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i 117 (351)
....+++|++++.+ ++ ...++.|.+||..+++...... ++...+.+++++++ ++++++. ..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEE
Confidence 35678999999988 55 4678899999988876543222 24467899999999 6655544 4457999
Q ss_pred EeCCCCceeEE-ecc----CCCCeEEEEEccCCCEEEEEecCCCC---------------CeEEEEEccCCceeEEeccC
Q psy519 118 WSITDGASVRV-FSD----HVSPVLSIAFSPCGKYLASGGTGSYD---------------KAVRLWSITDGASVRVFSDH 177 (351)
Q Consensus 118 ~d~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~~~~d---------------~~i~i~d~~~~~~~~~~~~~ 177 (351)
||.. ++.... ... ....+.+++++++|+++++... + +.|..||.. ++..... .+
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~ 170 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPA---GEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TA 170 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECB---CBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EE
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecC---cccccccccccccCCCCeEEEECCC-CCEEEec-cC
Confidence 9988 665433 221 1235789999999988777654 3 567777765 5443322 33
Q ss_pred CCCEEEEEEC----CCCcEEEEE-cCCCeEEEEEcC-CCcEEE--Ee-eccCC--CCEEEEEEcCCCCEEEEEeCCCeEE
Q psy519 178 VSPVLSIAFS----PCGKYLASG-GEDGLVLTHELT-TGRVIS--RF-HLQEH--EPVTSLVWSVTGETLVTGSLTGTVQ 246 (351)
Q Consensus 178 ~~~i~~~~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~~~~--~~-~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~ 246 (351)
......++|+ |+++.++++ ..++.|.+||+. +++... .+ ..... ..+..++++++|+++++...++.|.
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 3456889999 999765554 567899999986 443211 11 11111 4578999999999888887889999
Q ss_pred EEeCCCCceeee-----eecceeEEecCCceeeeeec
Q psy519 247 FYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAA 278 (351)
Q Consensus 247 i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~ 278 (351)
+||..+++.+.. ..+..++++|++..+.++..
T Consensus 251 ~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC
Confidence 999886665433 23456788899885554443
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.62 E-value=1.7e-13 Score=117.36 Aligned_cols=243 Identities=11% Similarity=0.050 Sum_probs=164.8
Q ss_pred EeeecCCccccEEEEec----------CCCceEEEecCCc-----cC-CC------ccceEEEEECCCCcE-EEEeC--C
Q psy519 16 QNSFKPETVEDVLANLE----------SQKNLQSRYLPYY-----TS-GH------DMTVWSVEACSKGLA-LTGSR--D 70 (351)
Q Consensus 16 ~~~~sp~~~~~~l~~~~----------~~~~i~i~~~~~~-----~~-~~------~~~i~~~~~~~~~~~-~~~~~--d 70 (351)
.+++||+ |++|+++. .++.|.+||..+. .. +. ......++|+|||++ +.+.. +
T Consensus 82 ~va~spD--G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADD--GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTT--SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCC--CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 3999999 99887765 3578999999887 10 10 123456899999987 44443 6
Q ss_pred CcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCC-CceeEEeccC----CCCeE-EEEEc-c
Q psy519 71 TTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITD-GASVRVFSDH----VSPVL-SIAFS-P 143 (351)
Q Consensus 71 ~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~----~~~i~-~~~~~-~ 143 (351)
+.|.|+|+.+++.+.++.... . ...+....+.+++.+.||.+.+.++.+ ++........ ..++. ..+|. +
T Consensus 160 ~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp CEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred CeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 899999999999988885432 1 222333445667778888888888876 5542211111 12222 23564 5
Q ss_pred CCCEEEEEecCCCCCeEEEEEccCCc--eeEEec---c-------CCCCEEEEEECCCCcEEEEEcC----------CCe
Q psy519 144 CGKYLASGGTGSYDKAVRLWSITDGA--SVRVFS---D-------HVSPVLSIAFSPCGKYLASGGE----------DGL 201 (351)
Q Consensus 144 ~~~~l~~~~~~~~d~~i~i~d~~~~~--~~~~~~---~-------~~~~i~~~~~~~~~~~l~~~~~----------dg~ 201 (351)
+|++++ .+. ++.+++.|+.++. ....+. . .......++++|+++.+++... .+.
T Consensus 237 dG~~~~-vs~---~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~ 312 (386)
T 3sjl_D 237 AGRLVW-PTY---TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRF 312 (386)
T ss_dssp TTEEEE-EBT---TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEE
T ss_pred CCcEEE-EeC---CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCE
Confidence 776555 445 7999999987654 222221 0 1122334777999988887643 257
Q ss_pred EEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCC-EEEEEe-CCCeEEEEeCCCCceeeee----ecceeEEecC
Q psy519 202 VLTHELTTGRVISRFHLQEHEPVTSLVWSVTGE-TLVTGS-LTGTVQFYGWPSASKIGIG----VYPRCAAQPV 269 (351)
Q Consensus 202 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~i~~~~~~~~~~~~----~~~~~~~s~~ 269 (351)
|.++|+.+++.+..+... ..+.++.+++|++ +|+++. .++.|.++|..+++.++.. ..+.+.+++|
T Consensus 313 V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 313 VVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EEEEECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 999999999999998764 3688999999997 666654 4899999999999988763 3345677665
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.60 E-value=6.6e-13 Score=113.72 Aligned_cols=268 Identities=9% Similarity=-0.003 Sum_probs=177.9
Q ss_pred EeeecCCccccEEEEecC-----CCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEe----------CCCcEE
Q psy519 16 QNSFKPETVEDVLANLES-----QKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGS----------RDTTAR 74 (351)
Q Consensus 16 ~~~~sp~~~~~~l~~~~~-----~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~----------~d~~i~ 74 (351)
.....|+ +..+.+... ++.|.+.|..+. ......+ . ++++|+|+. +++. .++.|.
T Consensus 37 ~~~~~pd--~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 37 LEAPAPD--ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCCC--TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred eeccCCC--CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 4566788 887776654 578999999877 2222223 4 999999976 3433 367899
Q ss_pred EEeCCCCeeeEEeeCCC-------CCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCC
Q psy519 75 LWSLEQMYPLRIFVGHK-------QDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCG 145 (351)
Q Consensus 75 vw~~~~~~~~~~~~~~~-------~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 145 (351)
+||..+++.+..+.-.. .....++++|||++++++.. ++.|.++|+.+++.+..+.-. + . ...+....
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~ 189 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAP 189 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEET
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCC
Confidence 99999999888774321 24567899999999988864 689999999999998888532 2 1 22333344
Q ss_pred CEEEEEecCCCCCeEEEEEccC-CceeEEeccC----CCCEE-EEEEC-CCCcEEEEEcCCCeEEEEEcCCCc--EEEEe
Q psy519 146 KYLASGGTGSYDKAVRLWSITD-GASVRVFSDH----VSPVL-SIAFS-PCGKYLASGGEDGLVLTHELTTGR--VISRF 216 (351)
Q Consensus 146 ~~l~~~~~~~~d~~i~i~d~~~-~~~~~~~~~~----~~~i~-~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~ 216 (351)
+.+++.+. ||.+.+.++.. ++.......+ ..++. ...|. ++|++++ .+.+|.+++.|+.+.. ....+
T Consensus 190 ~~~~~~~~---DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~ 265 (386)
T 3sjl_D 190 DTFFMHCR---DGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAV 265 (386)
T ss_dssp TEEEEEET---TSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCE
T ss_pred ceeEEECC---CCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecce
Confidence 56666666 88888888876 5543222111 12222 23553 6776655 4557999999997654 33333
Q ss_pred ec-c--------CCCCEEEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCceeee----eecceeEEecCCc-e
Q psy519 217 HL-Q--------EHEPVTSLVWSVTGETLVTGSL----------TGTVQFYGWPSASKIGI----GVYPRCAAQPVGF-E 272 (351)
Q Consensus 217 ~~-~--------~~~~v~~~~~~~~~~~l~~~~~----------dg~i~i~~~~~~~~~~~----~~~~~~~~s~~~~-~ 272 (351)
.. . .......++++++++.++.... .++|.++|+.+++.+.. .....++++||++ .
T Consensus 266 ~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ 345 (386)
T 3sjl_D 266 EALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPL 345 (386)
T ss_dssp ESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCE
T ss_pred eccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeE
Confidence 20 0 0123445778999998887643 25799999999998876 3456899999997 4
Q ss_pred eeeeeccceeeEEEeeeceeCceE
Q psy519 273 AATLAANSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~g~~~ 296 (351)
+.+... ....+.++|..+++..
T Consensus 346 ly~tn~--~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 346 LYALST--GDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEEET--TTTEEEEEETTTCCEE
T ss_pred EEEEcC--CCCeEEEEECCCCcEE
Confidence 444332 1234566777777644
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.60 E-value=4.5e-12 Score=106.44 Aligned_cols=222 Identities=12% Similarity=0.018 Sum_probs=148.9
Q ss_pred ceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe
Q psy519 52 TVWSVEACSK-GLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF 129 (351)
Q Consensus 52 ~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 129 (351)
-..+..|+++ +.+ ++...++.|..||..+++.. .+. ....+.+++++++++++++ . +..|.+||..+++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 3457888885 445 67777899999999887653 332 4567899999999995554 4 567999999887654332
Q ss_pred cc----CCCCeEEEEEccCCCEEEEEecC--------CCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEE-EE
Q psy519 130 SD----HVSPVLSIAFSPCGKYLASGGTG--------SYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLA-SG 196 (351)
Q Consensus 130 ~~----~~~~i~~~~~~~~~~~l~~~~~~--------~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~ 196 (351)
.. ....+..++++|+|+++++.... ...+.|..+|.. ++.. .+.........++|+||++.|+ +.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECTTSCEEEEEE
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcCCCCEEEEec
Confidence 21 12357889999999976654320 012344444432 3332 2323334567899999998665 55
Q ss_pred cCCCeEEEEEc--CCCcEE--EEe-ec-cCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee-----ecceeE
Q psy519 197 GEDGLVLTHEL--TTGRVI--SRF-HL-QEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIG-----VYPRCA 265 (351)
Q Consensus 197 ~~dg~i~i~d~--~~~~~~--~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-----~~~~~~ 265 (351)
+.++.|..||+ .++... ..+ .. .....+..++++++|++.++....+.|..||..+++.+... .+.+++
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCC 247 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEE
Confidence 56789999987 455432 111 11 12246789999999998888877889999999988876553 345688
Q ss_pred Ee-cCCceeeeeecc
Q psy519 266 AQ-PVGFEAATLAAN 279 (351)
Q Consensus 266 ~s-~~~~~~~~~~~~ 279 (351)
|. |++..|.+.+..
T Consensus 248 f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 248 FGGKNYSEMYVTCAR 262 (297)
T ss_dssp EESGGGCEEEEEEBC
T ss_pred EeCCCCCEEEEEcCC
Confidence 88 888776555543
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.60 E-value=7.5e-13 Score=111.68 Aligned_cols=217 Identities=10% Similarity=-0.015 Sum_probs=152.0
Q ss_pred cceEEeeecCCcccc-EEEEecCCCceEEEecCCc---cCCCccceEEEEECCCCcEEEEe-CCCcEEEEeCCCCeeeEE
Q psy519 12 KHFIQNSFKPETVED-VLANLESQKNLQSRYLPYY---TSGHDMTVWSVEACSKGLALTGS-RDTTARLWSLEQMYPLRI 86 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~-~d~~i~vw~~~~~~~~~~ 86 (351)
......+|+|+ ++ ++++...++.|..|+.... +..+...+..++++++|+++++. .++.|.+|+.+ ++.. .
T Consensus 45 ~~~egp~~~~~--g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~-~ 120 (305)
T 3dr2_A 45 TWSEGPAWWEA--QRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH-L 120 (305)
T ss_dssp SSEEEEEEEGG--GTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-E
T ss_pred cCccCCeEeCC--CCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE-E
Confidence 34567899999 88 5667777889999988543 33455678999999999985555 45789999986 5432 2
Q ss_pred eeCC-----CCCeEEEEEeCCCCEEEE----EeC-------------CCcEEEEeCCCCceeEEeccCCCCeEEEEEccC
Q psy519 87 FVGH-----KQDVTCARFHPKITYIGT----GSY-------------DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC 144 (351)
Q Consensus 87 ~~~~-----~~~i~~i~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 144 (351)
+..+ ...+..+++.|+|++.++ |.. .+.|+.+|..+++..... .......++|+|+
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spd 198 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPD 198 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTT
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCC
Confidence 2211 134667999999998876 332 256888887666654433 3355688999999
Q ss_pred CCEEEEEecCCCC------CeEEEEEccCCceeE---Ee-ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEE
Q psy519 145 GKYLASGGTGSYD------KAVRLWSITDGASVR---VF-SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVIS 214 (351)
Q Consensus 145 ~~~l~~~~~~~~d------~~i~i~d~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 214 (351)
++.|+++.. . +.|..||+..+. +. .+ .........++++++|++. +++.+ .|.+|+. +++.+.
T Consensus 199 g~~lyv~~~---~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 199 EQTLYVSQT---PEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-DGQLLG 271 (305)
T ss_dssp SSEEEEEEC---CC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-TSCEEE
T ss_pred CCEEEEEec---CCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-CCCEEE
Confidence 998888765 4 689999987653 21 11 1123345578999999944 44444 4999998 577777
Q ss_pred EeeccCCCCEEEEEEcCCCCEEEEEeCCC
Q psy519 215 RFHLQEHEPVTSLVWSVTGETLVTGSLTG 243 (351)
Q Consensus 215 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 243 (351)
.+.... .+..++|+++++.|..++.++
T Consensus 272 ~~~~~~--~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 272 HIPTPG--TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEECSS--CCCEEEECTTSCEEEEEETTE
T ss_pred EEECCC--ceeEEEEeCCCCEEEEEcCCe
Confidence 775433 588999999999888887654
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.59 E-value=7.4e-14 Score=120.07 Aligned_cols=170 Identities=12% Similarity=0.051 Sum_probs=131.0
Q ss_pred ceEEEEECCCCcE-EEEeCCCcEEEEeCCCCe-----------eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEe
Q psy519 52 TVWSVEACSKGLA-LTGSRDTTARLWSLEQMY-----------PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWS 119 (351)
Q Consensus 52 ~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~-----------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d 119 (351)
+++.+++++...+ ++|+.+ .+.+|++++.+ ..... .+.. |+.++| +++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 6888999988877 666665 66669865432 11222 3555 999999 88999998 789999999
Q ss_pred CCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCC
Q psy519 120 ITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGED 199 (351)
Q Consensus 120 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 199 (351)
+++.........+..++.++.+.+. .++++.. ||.|.+||+.++.... +...|++++|+|+| ++.|..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~---dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNS---VNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEET---TSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEEC---CCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 9887766666667788888877654 3777777 9999999999877643 34579999999999 6788899
Q ss_pred CeEEEEEcCCCcE--EEEeec--------cCCCCEEEEEEcCCCCEEEE
Q psy519 200 GLVLTHELTTGRV--ISRFHL--------QEHEPVTSLVWSVTGETLVT 238 (351)
Q Consensus 200 g~i~i~d~~~~~~--~~~~~~--------~~~~~v~~~~~~~~~~~l~~ 238 (351)
|.+++|+...++. ...+.. .+...|.++.|.+++.++++
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999999877664 444411 24578999999999998887
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.58 E-value=1e-12 Score=114.59 Aligned_cols=270 Identities=13% Similarity=0.027 Sum_probs=180.8
Q ss_pred CCCcE--EEEeCC----CcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEe----------CCCcEEEEeCCCC
Q psy519 60 SKGLA--LTGSRD----TTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGS----------YDKAVRLWSITDG 123 (351)
Q Consensus 60 ~~~~~--~~~~~d----~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~----------~dg~i~i~d~~~~ 123 (351)
+++.. ++...+ +.|.++|..+++.+..+.....+ .++++||++.++++. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 34443 554444 79999999999999888765555 899999999888876 3678999999999
Q ss_pred ceeEEeccC-------CCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCC-cEEEE
Q psy519 124 ASVRVFSDH-------VSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCG-KYLAS 195 (351)
Q Consensus 124 ~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~ 195 (351)
+.+..+.-. ......++++|||++++++.. ..++.|.+.|+.+++.+..+..... ....|++ ..+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~-~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~ 234 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF-SPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYM 234 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC-SSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec-CCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEE
Confidence 988776421 123457899999999999864 1157899999999998888764221 2233433 45566
Q ss_pred EcCCCeEEEEEcCCCcEEEE----eeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-------------
Q psy519 196 GGEDGLVLTHELTTGRVISR----FHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI------------- 258 (351)
Q Consensus 196 ~~~dg~i~i~d~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~------------- 258 (351)
.+.||.+.+.+..+++.... +..........+.|.+++..++..+..+.+.+.|.........
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccc
Confidence 66777777777755544422 1111111123457889988887778889999999876542211
Q ss_pred ----eecceeEEecCCceeeeeeccc-------eeeEEEeeeceeCceEEEe-----eEEEEecCCce-eeccEEEecCC
Q psy519 259 ----GVYPRCAAQPVGFEAATLAANS-------RVRTLREMHEIVGPVVVVE-----SFIVEIRPDKW-YEANLIVLDDD 321 (351)
Q Consensus 259 ----~~~~~~~~s~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~ 321 (351)
.....++++|++..+.+....+ ....+.+.|..+.+...-. ...+.|+||+. +....-..++.
T Consensus 315 g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred ccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 1122378999988766655321 2345666676665543222 12368999988 44433224788
Q ss_pred ccccceeeeeeeeec
Q psy519 322 LKECNLETYSQMIPV 336 (351)
Q Consensus 322 i~~~~~~~~~~~~~~ 336 (351)
+..+|++++.....+
T Consensus 395 VsVID~~t~kvv~tI 409 (426)
T 3c75_H 395 LHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEEEEe
Confidence 999999998777664
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.57 E-value=1.9e-12 Score=121.58 Aligned_cols=255 Identities=11% Similarity=0.053 Sum_probs=163.6
Q ss_pred EEecCCccCCCccceEEEEECCCCcE-E-EEe----CCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC
Q psy519 39 SRYLPYYTSGHDMTVWSVEACSKGLA-L-TGS----RDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYD 112 (351)
Q Consensus 39 i~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~----~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d 112 (351)
+.|.+....+|...+..++|+|||++ + +.+ ....|++||+++++.+... .+......++|+ |++.|+.++.+
T Consensus 117 llD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 117 FLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp EECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESS
T ss_pred EEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEec
Confidence 44554444556678999999999987 3 222 2357999999999865431 111113567899 99999888877
Q ss_pred C-------------cEEEEeCCCCce--eEEec--c-CCCCeEEEEEccCCCEEEEEec-CCCCCeEEEEEccCCc-eeE
Q psy519 113 K-------------AVRLWSITDGAS--VRVFS--D-HVSPVLSIAFSPCGKYLASGGT-GSYDKAVRLWSITDGA-SVR 172 (351)
Q Consensus 113 g-------------~i~i~d~~~~~~--~~~~~--~-~~~~i~~~~~~~~~~~l~~~~~-~~~d~~i~i~d~~~~~-~~~ 172 (351)
. .|++|++.++.. ...+. . +......+.|+|||++|+.... ...+..|+++|+.++. ...
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence 4 399999987653 22332 2 3445788999999998866543 1123589999998764 445
Q ss_pred EeccCCCCEEEEEECCCCcEEEE-EcC---CCeEEEEEcCCCcE--EEEeeccCCCCEEEEEEcCCCCEEEEEeCC-C--
Q psy519 173 VFSDHVSPVLSIAFSPCGKYLAS-GGE---DGLVLTHELTTGRV--ISRFHLQEHEPVTSLVWSVTGETLVTGSLT-G-- 243 (351)
Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~l~~-~~~---dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g-- 243 (351)
.+..+....... ++++|..|+. ... .+.|..+|+.++.. ...+. .+...+. .|+++++.|+....+ +
T Consensus 275 ~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~--~~s~~g~~lv~~~~~~g~~ 350 (693)
T 3iuj_A 275 TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-PERQQVL--TVHSGSGYLFAEYMVDATA 350 (693)
T ss_dssp EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCE--EEEEETTEEEEEEEETTEE
T ss_pred EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe-cCCCCEE--EEEEECCEEEEEEEECCee
Confidence 555555555554 5666665554 433 36799999987653 23333 3343444 888999988776654 3
Q ss_pred eEEEEeCCCCceeee-----eecceeEEecCCceeeeeecc-ceeeEEEeeeceeCceEEEe
Q psy519 244 TVQFYGWPSASKIGI-----GVYPRCAAQPVGFEAATLAAN-SRVRTLREMHEIVGPVVVVE 299 (351)
Q Consensus 244 ~i~i~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~ 299 (351)
.|++|++..+..... ..+..+.++|++..+....++ ..-..+..++..+++...+.
T Consensus 351 ~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 351 RVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp EEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 789999886543322 123345667888776655443 34456777777777644443
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=7e-13 Score=113.81 Aligned_cols=232 Identities=9% Similarity=-0.010 Sum_probs=157.5
Q ss_pred cceEEeeecCCccccEEEEec--CCCceEEEecCCc-----------cCCCccceEEEEECCCCcE-EEEeC-----CCc
Q psy519 12 KHFIQNSFKPETVEDVLANLE--SQKNLQSRYLPYY-----------TSGHDMTVWSVEACSKGLA-LTGSR-----DTT 72 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~--~~~~i~i~~~~~~-----------~~~~~~~i~~~~~~~~~~~-~~~~~-----d~~ 72 (351)
..+..++++|+ |+++++.. .++.++||.+... ...+...+..+++++++++ ++-.. +..
T Consensus 17 ~~p~~va~~~~--g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPD--GRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTT--SCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCC--CCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 56788999999 99988853 2343556655422 1234568999999999988 44332 578
Q ss_pred EEEEeCCCCeeeEEeeCC------CCCeEEEEEeCCCCEE-EEEe---CCCcEEEEeCCCCceeEEeccCC---------
Q psy519 73 ARLWSLEQMYPLRIFVGH------KQDVTCARFHPKITYI-GTGS---YDKAVRLWSITDGASVRVFSDHV--------- 133 (351)
Q Consensus 73 i~vw~~~~~~~~~~~~~~------~~~i~~i~~~~~~~~l-~~~~---~dg~i~i~d~~~~~~~~~~~~~~--------- 133 (351)
|.+||+.+++.+..+..+ ...+..+++++++..+ ++.. .++.|.+||+.+++..+.+..|.
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999999877666432 2346889999865454 4444 57899999998887666553311
Q ss_pred --------------------CCeEEEEEccCCCEEEEEecCCCCC-eEEEEEcc---CCc--------eeEEeccCCCCE
Q psy519 134 --------------------SPVLSIAFSPCGKYLASGGTGSYDK-AVRLWSIT---DGA--------SVRVFSDHVSPV 181 (351)
Q Consensus 134 --------------------~~i~~~~~~~~~~~l~~~~~~~~d~-~i~i~d~~---~~~--------~~~~~~~~~~~i 181 (351)
..+..++|+|+++.|+++.. .+ .+..++.. .+. .+... ++....
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~p 250 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM---HSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPIC 250 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES---SCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSC
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC---CCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCC
Confidence 23688999999998888766 44 56555532 111 01111 223345
Q ss_pred EEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy519 182 LSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYG 249 (351)
Q Consensus 182 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~ 249 (351)
..++++++|.++++...++.|.+||..+++............+.+++|.++++++++.+..+.+.+|.
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 67899999999999999999999998566543333222235689999999998888877655554443
No 218
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.57 E-value=1.3e-13 Score=118.58 Aligned_cols=168 Identities=13% Similarity=0.061 Sum_probs=132.1
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc---------------cCCCccceEEEEECCCCcE-EEEeCCCcEEE
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---------------TSGHDMTVWSVEACSKGLA-LTGSRDTTARL 75 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---------------~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~v 75 (351)
.++..+++++. ..++++|+.++ +.+|++... ...+.. |+.++| ++.+ +++ .++.|++
T Consensus 38 ~~~nlLais~~--~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 38 ASLQNLDISNS--KSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp SCCBCEEEETT--TTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred ccccEEEEcCC--CCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 46889999999 99999998875 666985432 223455 999999 7777 555 8899999
Q ss_pred EeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCC
Q psy519 76 WSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGS 155 (351)
Q Consensus 76 w~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 155 (351)
||+.+.........|..++.++.+.+. .+++++.||.+.+||+.++.... +...|+|++|+|+| ++.|..
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~-- 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLK-- 180 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEET--
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEc--
Confidence 999877666666677888888887754 38888999999999999877643 34689999999999 566777
Q ss_pred CCCeEEEEEccCCce--eEEe------c---cCCCCEEEEEECCCCcEEEEEc
Q psy519 156 YDKAVRLWSITDGAS--VRVF------S---DHVSPVLSIAFSPCGKYLASGG 197 (351)
Q Consensus 156 ~d~~i~i~d~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~l~~~~ 197 (351)
||.+++|+...++. ...+ . +|...|.++.|.+++.++++-.
T Consensus 181 -dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 181 -DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp -TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred -CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99999999877764 4455 2 3678899999999999888643
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.55 E-value=4.1e-12 Score=110.76 Aligned_cols=227 Identities=12% Similarity=0.021 Sum_probs=152.3
Q ss_pred ccEEEEecC-C----CceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEe----------CCCcEEEEeCCCCee
Q psy519 25 EDVLANLES-Q----KNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGS----------RDTTARLWSLEQMYP 83 (351)
Q Consensus 25 ~~~l~~~~~-~----~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~----------~d~~i~vw~~~~~~~ 83 (351)
++++.+... + +.|.++|..+. ...-..+ .++++|||+. +++. .++.|.++|..+++.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 565554433 2 68999999887 2212233 7999999976 4433 467899999999998
Q ss_pred eEEeeCC-------CCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCCC-------CeEEEEEccCCCE
Q psy519 84 LRIFVGH-------KQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHVS-------PVLSIAFSPCGKY 147 (351)
Q Consensus 84 ~~~~~~~-------~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~ 147 (351)
+..+.-. ......+.++|||++++++.. ++.|.+.|+.+++.+..+.-... .-.-+.++++|++
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~ 241 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSL 241 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSE
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCE
Confidence 8776422 123457899999999998874 57899999999988776643110 0011334444443
Q ss_pred E-------------------------------------EEEecCCCCCeEEEEEccCCceeE--Eecc----------CC
Q psy519 148 L-------------------------------------ASGGTGSYDKAVRLWSITDGASVR--VFSD----------HV 178 (351)
Q Consensus 148 l-------------------------------------~~~~~~~~d~~i~i~d~~~~~~~~--~~~~----------~~ 178 (351)
+ +.... .+.+.+.|+....... .+.. ..
T Consensus 242 ~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~---~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 242 ARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY---TGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp EEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT---TSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred EEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC---CCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 3 33323 4455666654332110 0000 00
Q ss_pred CCEEEEEECCCCcEEEEEcC----------CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCC-EEEEEe-CCCeEE
Q psy519 179 SPVLSIAFSPCGKYLASGGE----------DGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGE-TLVTGS-LTGTVQ 246 (351)
Q Consensus 179 ~~i~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~ 246 (351)
.....++++|+++.+++... ++.|.++|+.+.+.+.++.... ....+.|+|||+ ++++.. .++.|.
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~--~P~gia~spDg~~~lyv~n~~s~~Vs 396 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH--EIDSINVSQDAEPLLYALSAGTQTLH 396 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECCSSSCEEEEEETTTTEEE
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC--CcCeEEEccCCCEEEEEEcCCCCeEE
Confidence 11123688999887777642 3579999999999999886533 589999999999 888888 489999
Q ss_pred EEeCCCCceeee
Q psy519 247 FYGWPSASKIGI 258 (351)
Q Consensus 247 i~~~~~~~~~~~ 258 (351)
++|+.+++.++.
T Consensus 397 VID~~t~kvv~t 408 (426)
T 3c75_H 397 IYDAATGEELRS 408 (426)
T ss_dssp EEETTTCCEEEE
T ss_pred EEECCCCCEEEE
Confidence 999999998866
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.54 E-value=3.8e-11 Score=103.67 Aligned_cols=217 Identities=9% Similarity=0.046 Sum_probs=150.0
Q ss_pred CCCcE--EEEeCCCcEEEEeCCCC----eeeEEee-------CCCCCeEEEEEeCCCCEEEEEeCC------CcEEEEeC
Q psy519 60 SKGLA--LTGSRDTTARLWSLEQM----YPLRIFV-------GHKQDVTCARFHPKITYIGTGSYD------KAVRLWSI 120 (351)
Q Consensus 60 ~~~~~--~~~~~d~~i~vw~~~~~----~~~~~~~-------~~~~~i~~i~~~~~~~~l~~~~~d------g~i~i~d~ 120 (351)
+++++ +.+..++.|+|+|+.+. +...++. ........+...|+| .++++..+ |.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 66765 77788999999999755 5555552 011244567888999 66665544 78999999
Q ss_pred CCCceeEEeccCCC---CeEEEEEccCCCEEEEEecC----------------CCCCeEEEEEccCCceeEEeccCC--C
Q psy519 121 TDGASVRVFSDHVS---PVLSIAFSPCGKYLASGGTG----------------SYDKAVRLWSITDGASVRVFSDHV--S 179 (351)
Q Consensus 121 ~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~~----------------~~d~~i~i~d~~~~~~~~~~~~~~--~ 179 (351)
.+++.+..+..... .-+.+-|+|+++.+++..-+ .....|.+||+.+++.+.++.... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999888863222 23458889999998887411 126899999999988777776431 2
Q ss_pred CEEEEEE--CCCCcEEEEEcC------CCeEEEEEcCCCcEE--EEeeccC-----------------CCCEEEEEEcCC
Q psy519 180 PVLSIAF--SPCGKYLASGGE------DGLVLTHELTTGRVI--SRFHLQE-----------------HEPVTSLVWSVT 232 (351)
Q Consensus 180 ~i~~~~~--~~~~~~l~~~~~------dg~i~i~d~~~~~~~--~~~~~~~-----------------~~~v~~~~~~~~ 232 (351)
....+.| +|++++++++++ ++.|.+|....++.. +.+.... ......+.+++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3445555 999999888774 567877766544311 1111111 234788999999
Q ss_pred CCEEEEEeC-CCeEEEEeCCCC---ceeee---e----------------ecceeEEecCCceeeeee
Q psy519 233 GETLVTGSL-TGTVQFYGWPSA---SKIGI---G----------------VYPRCAAQPVGFEAATLA 277 (351)
Q Consensus 233 ~~~l~~~~~-dg~i~i~~~~~~---~~~~~---~----------------~~~~~~~s~~~~~~~~~~ 277 (351)
|++|.++.. .+.|.+||+... +.+.. . ....+.++|||+++.++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999988776 689999998632 33322 2 135689999999988777
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.54 E-value=8.3e-12 Score=105.26 Aligned_cols=222 Identities=9% Similarity=-0.006 Sum_probs=149.2
Q ss_pred ccceEEEEECCCCc-E-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeE
Q psy519 50 DMTVWSVEACSKGL-A-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVR 127 (351)
Q Consensus 50 ~~~i~~~~~~~~~~-~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 127 (351)
........|+++++ + ++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|..|+.. ++...
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE
Confidence 34566889999987 4 77778899999998 444 34455566778999999999977666566889999986 55332
Q ss_pred Eecc----CCCCeEEEEEccCCCEEEE----EecC----------CCCCeEEEEEccCCceeEEeccCCCCEEEEEECCC
Q psy519 128 VFSD----HVSPVLSIAFSPCGKYLAS----GGTG----------SYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC 189 (351)
Q Consensus 128 ~~~~----~~~~i~~~~~~~~~~~l~~----~~~~----------~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 189 (351)
.... ....+..++++|+|++.++ +... ...+.|..||..+++..... .......++|+||
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spd 198 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPD 198 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTT
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCC
Confidence 2211 1134667999999998886 3210 00256888887666544333 3345678999999
Q ss_pred CcEEEEEcCC------CeEEEEEcCCCcEE--EEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee--
Q psy519 190 GKYLASGGED------GLVLTHELTTGRVI--SRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIG-- 259 (351)
Q Consensus 190 ~~~l~~~~~d------g~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-- 259 (351)
++.|+.+... +.|.+|++..+... ..+.......+..++++++|++.++ +.+ .|.+|+.. ++.+...
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g~~~~~~~~ 275 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-GQLLGHIPT 275 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-SCEEEEEEC
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-CCEEEEEEC
Confidence 9988777654 68999998765411 1111112344567899999995444 444 59999974 5544432
Q ss_pred --ecceeEEecCCceeeeeecc
Q psy519 260 --VYPRCAAQPVGFEAATLAAN 279 (351)
Q Consensus 260 --~~~~~~~s~~~~~~~~~~~~ 279 (351)
.+..++|+|++..+...+.+
T Consensus 276 ~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 276 PGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp SSCCCEEEECTTSCEEEEEETT
T ss_pred CCceeEEEEeCCCCEEEEEcCC
Confidence 35678888888877766654
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.53 E-value=4.8e-11 Score=101.53 Aligned_cols=219 Identities=13% Similarity=-0.047 Sum_probs=144.1
Q ss_pred eEEEEECCCC-cE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEec
Q psy519 53 VWSVEACSKG-LA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFS 130 (351)
Q Consensus 53 i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 130 (351)
..++.|+|++ .+ ++...++.|..||.++++.. .+. ....+.+++++|+++++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 4567899974 44 67777899999999887643 333 34679999999999877654 34 49999998877543322
Q ss_pred c----CCCCeEEEEEccCCCEEEEEecC---CCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEE-cCCCeE
Q psy519 131 D----HVSPVLSIAFSPCGKYLASGGTG---SYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASG-GEDGLV 202 (351)
Q Consensus 131 ~----~~~~i~~~~~~~~~~~l~~~~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i 202 (351)
. ....+.+++++|+|+++++.... ...+.|..+| +++.. .+.........++|+||++.++.+ +.++.|
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 1 12357899999999976654320 0024566666 44433 332333456789999999876554 557899
Q ss_pred EEEEcC--CC-cEE--EEe-ec-cCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee-----ecceeEEe-cC
Q psy519 203 LTHELT--TG-RVI--SRF-HL-QEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIG-----VYPRCAAQ-PV 269 (351)
Q Consensus 203 ~i~d~~--~~-~~~--~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-----~~~~~~~s-~~ 269 (351)
.+||+. ++ ... ..+ .. .....+..++++++|.+.++...++.|..|+. +++.+... .+..++|+ |+
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence 999985 55 311 111 11 12345788999999998877767789999998 45554432 34567777 77
Q ss_pred Cceeeeeecc
Q psy519 270 GFEAATLAAN 279 (351)
Q Consensus 270 ~~~~~~~~~~ 279 (351)
+..+.+....
T Consensus 283 ~~~L~vt~~~ 292 (326)
T 2ghs_A 283 ASRLLVTSAR 292 (326)
T ss_dssp SCEEEEEEBC
T ss_pred CCEEEEEecC
Confidence 7665544433
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.45 E-value=4.3e-11 Score=111.89 Aligned_cols=248 Identities=10% Similarity=0.055 Sum_probs=165.7
Q ss_pred ccEEEEecCCCceEEEecCCc-----c-CC-CccceEEEEECC---CCcEEEEe------CCCcEEEEeCCCCeeeEEee
Q psy519 25 EDVLANLESQKNLQSRYLPYY-----T-SG-HDMTVWSVEACS---KGLALTGS------RDTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-----~-~~-~~~~i~~~~~~~---~~~~~~~~------~d~~i~vw~~~~~~~~~~~~ 88 (351)
+..|++++.++.+..+|..++ . .. +......+..+| ++.++.+. .++.|+.||.++|+.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 567788888999999998776 1 11 111101111122 55664443 36899999999999887765
Q ss_pred CCC-------------------------------CCeEEEEEeCCCCEEEEEeCCCc-------------------EEEE
Q psy519 89 GHK-------------------------------QDVTCARFHPKITYIGTGSYDKA-------------------VRLW 118 (351)
Q Consensus 89 ~~~-------------------------------~~i~~i~~~~~~~~l~~~~~dg~-------------------i~i~ 118 (351)
... ..-..+++.|+...++.+..++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 210 00125788898889998887763 9999
Q ss_pred eCCCCceeEEecc--CC-------CCeEEEEEccCCC---EEEEEecCCCCCeEEEEEccCCceeEEeccCCC-------
Q psy519 119 SITDGASVRVFSD--HV-------SPVLSIAFSPCGK---YLASGGTGSYDKAVRLWSITDGASVRVFSDHVS------- 179 (351)
Q Consensus 119 d~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~---~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~------- 179 (351)
|.++|+.+..++. |. .+........+|+ .++.++. +|.++++|.++|+.+...+....
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~---~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~ 357 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPK---NGFFYVIDRATGELLSAKGIVPQSWTKGMD 357 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCT---TSEEEEEETTTCCEEEEEESSCCSSEEEEE
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECC---CCeEEEEECCCCCEeccccccccccccccC
Confidence 9999998887753 21 1222222233564 6777777 99999999999988744321110
Q ss_pred --------------------------------CEEEEEECCCCcEEEEEcC-----------------------------
Q psy519 180 --------------------------------PVLSIAFSPCGKYLASGGE----------------------------- 198 (351)
Q Consensus 180 --------------------------------~i~~~~~~~~~~~l~~~~~----------------------------- 198 (351)
.-..++++|+..++++...
T Consensus 358 ~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 358 MKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred ccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 0112678888777776522
Q ss_pred ----------------CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeec-
Q psy519 199 ----------------DGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGVY- 261 (351)
Q Consensus 199 ----------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~- 261 (351)
+|.|..||+.+++.+-.+.. ..+...-.+...+.+++.++.||.++.||.++++.+-....
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY--VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC--CCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 37799999999998877653 23334445666788999999999999999999998865332
Q ss_pred -----ceeEEecCCceeeeee
Q psy519 262 -----PRCAAQPVGFEAATLA 277 (351)
Q Consensus 262 -----~~~~~s~~~~~~~~~~ 277 (351)
..+.++.+|+..+...
T Consensus 516 ~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 516 SGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp SCCCSCCEEEEETTEEEEEEE
T ss_pred CCcccCceEEEECCEEEEEEE
Confidence 3467788888654443
No 224
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.45 E-value=5.1e-11 Score=106.42 Aligned_cols=236 Identities=13% Similarity=-0.002 Sum_probs=163.7
Q ss_pred CCcE--EEEeCCCcEEEEeCCCCeeeEEeeCC-CCCeEEEEE-e-CCCCEEEEEe------------------CCCcEEE
Q psy519 61 KGLA--LTGSRDTTARLWSLEQMYPLRIFVGH-KQDVTCARF-H-PKITYIGTGS------------------YDKAVRL 117 (351)
Q Consensus 61 ~~~~--~~~~~d~~i~vw~~~~~~~~~~~~~~-~~~i~~i~~-~-~~~~~l~~~~------------------~dg~i~i 117 (351)
||++ +....++.|.+.|+.+.+....+.-. ......+++ + |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 6666 55556778999999999987755422 345788888 5 8999998885 2457999
Q ss_pred EeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC-----------------------------------CeEEE
Q psy519 118 WSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD-----------------------------------KAVRL 162 (351)
Q Consensus 118 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d-----------------------------------~~i~i 162 (351)
.|..+.+...++.-.. ....++++|+|+++++++..+.. +.|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999998888776333 44668899999999998863211 24777
Q ss_pred EEccC--Cce-eEEeccCCCCEEEEEECCCCcEEEEEc-CCCeEEEEEcCCCc------------EEEEeeccCCCCEEE
Q psy519 163 WSITD--GAS-VRVFSDHVSPVLSIAFSPCGKYLASGG-EDGLVLTHELTTGR------------VISRFHLQEHEPVTS 226 (351)
Q Consensus 163 ~d~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~~~v~~ 226 (351)
.|.++ ++. +..+... ....++.++|||+++++++ .+..|.++|+.+.+ ..... ........
T Consensus 259 ID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v--~vG~gP~h 335 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP--ELGLGPLH 335 (595)
T ss_dssp EECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC--BCCSCEEE
T ss_pred EeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc--CCCCCcce
Confidence 77776 444 4444332 2345789999999887776 47899999998653 23333 34467899
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCC----------Cceeeeeec----------ceeEEecCCceeeeeeccceeeEE-
Q psy519 227 LVWSVTGETLVTGSLTGTVQFYGWPS----------ASKIGIGVY----------PRCAAQPVGFEAATLAANSRVRTL- 285 (351)
Q Consensus 227 ~~~~~~~~~l~~~~~dg~i~i~~~~~----------~~~~~~~~~----------~~~~~s~~~~~~~~~~~~~~~~~~- 285 (351)
++|+|+|...++.-.|++|.+||+.. .+.+....+ .....+|||+++.++...+.++.+
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~ 415 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN 415 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence 99999994344555699999999987 344444333 234668999999888877766542
Q ss_pred ---------EeeeceeCceEEEee
Q psy519 286 ---------REMHEIVGPVVVVES 300 (351)
Q Consensus 286 ---------~~~~~~~g~~~~~~~ 300 (351)
.+++...++...+..
T Consensus 416 ~gp~~~~~~ql~dis~~~m~lv~d 439 (595)
T 1fwx_A 416 VGPLKPENDQLIDISGDKMVLVHD 439 (595)
T ss_dssp CCSSCCEEEEEEECSSSSCEEEEE
T ss_pred CCCCCCCcceEEEcCCCcEEEEEE
Confidence 566665455444433
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.44 E-value=3.5e-11 Score=112.19 Aligned_cols=247 Identities=11% Similarity=0.084 Sum_probs=168.7
Q ss_pred ccEEEEecCCCceEEEecCCc-----cCCC-c----cceEEEEECCCCcEEEEeC------CCcEEEEeCCCCeeeEEee
Q psy519 25 EDVLANLESQKNLQSRYLPYY-----TSGH-D----MTVWSVEACSKGLALTGSR------DTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-----~~~~-~----~~i~~~~~~~~~~~~~~~~------d~~i~vw~~~~~~~~~~~~ 88 (351)
+..|++++.++.+..+|..++ ...+ . ..+...-...++.++.++. ++.|+.+|.++++.+..+.
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 567788888899999998776 1111 0 1111100012455554443 6899999999999887775
Q ss_pred CCCCC--------------------------------eEEEEEeCCCCEEEEEeCCC-------------------cEEE
Q psy519 89 GHKQD--------------------------------VTCARFHPKITYIGTGSYDK-------------------AVRL 117 (351)
Q Consensus 89 ~~~~~--------------------------------i~~i~~~~~~~~l~~~~~dg-------------------~i~i 117 (351)
..... ...++++|++..++.+..++ .|..
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence 42211 12478889888888887664 5999
Q ss_pred EeCCCCceeEEecc--CC-------CCeEEEEEccCC---CEEEEEecCCCCCeEEEEEccCCceeEEeccCC-------
Q psy519 118 WSITDGASVRVFSD--HV-------SPVLSIAFSPCG---KYLASGGTGSYDKAVRLWSITDGASVRVFSDHV------- 178 (351)
Q Consensus 118 ~d~~~~~~~~~~~~--~~-------~~i~~~~~~~~~---~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~------- 178 (351)
+|.++++.+..++. |. ....-+....+| ..++.++. +|.++++|.++|+.+..+....
T Consensus 288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~---~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPK---NGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCT---TSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECC---CCEEEEEECCCCCEeccccccccCccccc
Confidence 99999998877653 21 122223444477 67888877 9999999999999877654221
Q ss_pred ----CCE------------------------EEEEECCCCcEEEEEcC--------------------------------
Q psy519 179 ----SPV------------------------LSIAFSPCGKYLASGGE-------------------------------- 198 (351)
Q Consensus 179 ----~~i------------------------~~~~~~~~~~~l~~~~~-------------------------------- 198 (351)
.++ ..++++|++.++++...
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 011 14678898888877543
Q ss_pred -----------CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeecc-----
Q psy519 199 -----------DGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGVYP----- 262 (351)
Q Consensus 199 -----------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~----- 262 (351)
.|.|..||+.+++.+-.+.. ..++....+..++.+++.++.||.+++||..+++.+....+.
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 522 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVA 522 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCC--CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCccc
Confidence 27899999999998877653 334455556677888999999999999999999998764433
Q ss_pred -eeEEecCCceeeee
Q psy519 263 -RCAAQPVGFEAATL 276 (351)
Q Consensus 263 -~~~~s~~~~~~~~~ 276 (351)
.+.++++|+..+..
T Consensus 523 ~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 523 APSTYMVDGRQYVSV 537 (677)
T ss_dssp CCEEEEETTEEEEEE
T ss_pred CCEEEEeCCEEEEEE
Confidence 35666888765444
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=9.9e-11 Score=100.37 Aligned_cols=224 Identities=11% Similarity=0.007 Sum_probs=145.1
Q ss_pred cceEEEEECCCCcE-EEEe--CCCcEEEEeCCCCeeeEEe-------eCCCCCeEEEEEeCCCCEEEEEeC-----CCcE
Q psy519 51 MTVWSVEACSKGLA-LTGS--RDTTARLWSLEQMYPLRIF-------VGHKQDVTCARFHPKITYIGTGSY-----DKAV 115 (351)
Q Consensus 51 ~~i~~~~~~~~~~~-~~~~--~d~~i~vw~~~~~~~~~~~-------~~~~~~i~~i~~~~~~~~l~~~~~-----dg~i 115 (351)
..+..++++++|++ ++.. .++.++||.+.+++.. .+ ..+-..+.+++++++++++++... ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 56889999999988 5543 2342555555455432 22 124467899999999876665433 5789
Q ss_pred EEEeCCCCceeEEecc------CCCCeEEEEEccCCCEEEEEecC-CCCCeEEEEEccCCceeEEeccCC----------
Q psy519 116 RLWSITDGASVRVFSD------HVSPVLSIAFSPCGKYLASGGTG-SYDKAVRLWSITDGASVRVFSDHV---------- 178 (351)
Q Consensus 116 ~i~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~~-~~d~~i~i~d~~~~~~~~~~~~~~---------- 178 (351)
.+||+.+++.+..+.. +...+..+++++++..++.+... ..++.|.+||+.+++..+.+..|.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 9999999887665542 12356889999865555444320 017899999998887666553321
Q ss_pred -------------------CCEEEEEECCCCcEEEEEcCCC-eEEEEEcC---CCc-----E---EEEeeccCCCCEEEE
Q psy519 179 -------------------SPVLSIAFSPCGKYLASGGEDG-LVLTHELT---TGR-----V---ISRFHLQEHEPVTSL 227 (351)
Q Consensus 179 -------------------~~i~~~~~~~~~~~l~~~~~dg-~i~i~d~~---~~~-----~---~~~~~~~~~~~v~~~ 227 (351)
..+..++|+|+++.|+.+..++ .+..++.. .+. . +... .+......+
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--g~~g~pdgi 253 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY--SEKPICDGI 253 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE--EECCSCSCE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec--ccCCCCceE
Confidence 2357899999999888877655 55555532 111 0 0111 122356789
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeeee------ecceeEEecCCceeeeee
Q psy519 228 VWSVTGETLVTGSLTGTVQFYGWPSASKIGIG------VYPRCAAQPVGFEAATLA 277 (351)
Q Consensus 228 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~------~~~~~~~s~~~~~~~~~~ 277 (351)
+++++|.++++...++.|.+||..+++..... ....+++.+++..+++..
T Consensus 254 a~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 99999999999888999999998556543221 134577777766554443
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.41 E-value=3.7e-11 Score=103.01 Aligned_cols=258 Identities=12% Similarity=-0.065 Sum_probs=169.6
Q ss_pred EEEeCCC----cEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEe----------CCCcEEEEeCCCCceeEEec
Q psy519 65 LTGSRDT----TARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGS----------YDKAVRLWSITDGASVRVFS 130 (351)
Q Consensus 65 ~~~~~d~----~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~ 130 (351)
++...++ +|.++|..+++.+..+.....+ .+.++||+++++++. .++.|.+||+.+++.+..+.
T Consensus 36 V~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~ 113 (368)
T 1mda_H 36 ITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE 113 (368)
T ss_dssp EEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE
T ss_pred EECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence 5555555 8889999999999988765566 799999999998886 36889999999999988875
Q ss_pred cC-------CCCeEEEEEccCCCEEEEEecCCCCCeEEE--EEccCCceeEEeccCCCCEEEEEECCCC-cEEEEEcCCC
Q psy519 131 DH-------VSPVLSIAFSPCGKYLASGGTGSYDKAVRL--WSITDGASVRVFSDHVSPVLSIAFSPCG-KYLASGGEDG 200 (351)
Q Consensus 131 ~~-------~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i--~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg 200 (351)
.. ......++++|||++++++... .+..+.+ +|+.+ +..+..... ..+.|++ ..+++.+.||
T Consensus 114 v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~-~~~~v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~~dg 185 (368)
T 1mda_H 114 LPDAPRFSVGPRVHIIGNCASSACLLFFLFG-SSAAAGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGSCPA 185 (368)
T ss_dssp ETTSCSCCBSCCTTSEEECTTSSCEEEEECS-SSCEEEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCCCTT
T ss_pred CCCccccccCCCcceEEEcCCCCEEEEEccC-CCCeEEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEcCCC
Confidence 32 1234679999999999988641 1356888 99877 444432111 1223444 3445566788
Q ss_pred eEEEEEcCC-----CcEEE----EeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeeee----------
Q psy519 201 LVLTHELTT-----GRVIS----RFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSAS--KIGIG---------- 259 (351)
Q Consensus 201 ~i~i~d~~~-----~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~---------- 259 (351)
.+.+.|+.+ ++... .+.. ...+. . .+++..++..+. +.+.+.|+.+.. .+...
T Consensus 186 ~~~~vd~~~~~~~~~~v~~~~t~~i~v-g~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 186 SLAASDLAAAPAAAGIVGAQCTGAQNC-SSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKAD 259 (368)
T ss_dssp SCEEEECCSSCCCCEECCCCSCTTSCB-CSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHT
T ss_pred CEEEEECccccccCCeEEEEeeeeeeC-CCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccc
Confidence 888888876 33221 1111 12233 3 566666666666 999999987543 21111
Q ss_pred -----ecceeEEecCCceeeeeec-c-c-----eeeEEEeeeceeCceEEEe-----eEEEEecCCceeeccEEE-ecCC
Q psy519 260 -----VYPRCAAQPVGFEAATLAA-N-S-----RVRTLREMHEIVGPVVVVE-----SFIVEIRPDKWYEANLIV-LDDD 321 (351)
Q Consensus 260 -----~~~~~~~s~~~~~~~~~~~-~-~-----~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~ 321 (351)
....++++|++..+.+... . + ..... ++|..+++...-. ...+.|+||+.+...... .+++
T Consensus 260 ~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~-ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~ 338 (368)
T 1mda_H 260 NFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS-SVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE-EEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred ccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE-EEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCe
Confidence 1122789999998776654 2 2 12222 7776665433211 223689999986655545 4799
Q ss_pred ccccceeeeeeeeecCCc
Q psy519 322 LKECNLETYSQMIPVPSG 339 (351)
Q Consensus 322 i~~~~~~~~~~~~~~~~~ 339 (351)
+..+|+++.+....++.+
T Consensus 339 VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 339 LDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EEEEESSSCEEEEECCCC
T ss_pred EEEEECCCCcEEEEEECC
Confidence 999999998877766654
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.40 E-value=5.9e-14 Score=121.60 Aligned_cols=185 Identities=12% Similarity=0.003 Sum_probs=108.2
Q ss_pred CCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCC-CeE-E
Q psy519 61 KGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVS-PVL-S 138 (351)
Q Consensus 61 ~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~i~-~ 138 (351)
++.+++++.|+.|+.||..+++.+..+.. ..+.+..+..++..+++++.||.|+.||..+++.+.....+.. .+. +
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 45668899999999999999999888876 4454545556777788888999999999999887766543211 010 0
Q ss_pred EEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeec
Q psy519 139 IAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHL 218 (351)
Q Consensus 139 ~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 218 (351)
..+. ++..+++++. ++.++.||.++|+.+..+..+. ...++|++..+++++.++.|+.||.++++.+-.+..
T Consensus 87 p~~~-~~~~v~~g~~---dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 87 PCRS-SDGILYMGKK---QDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp SCC------CCCCEE---EEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred ceEe-cCCEEEEEeC---CCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 1111 3456677777 8999999999999887775543 235667888999999999999999999987655532
Q ss_pred cCCCCEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCceeee
Q psy519 219 QEHEPVTSLVWSVTG---ETLVTGSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 219 ~~~~~v~~~~~~~~~---~~l~~~~~dg~i~i~~~~~~~~~~~ 258 (351)
.. .....++.+. ..+++++.||.++.||..+++.+-.
T Consensus 159 ~~---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 159 FD---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp EE---ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEE
T ss_pred cc---ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEE
Confidence 11 1223333332 5577788999999999999987654
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.39 E-value=3.1e-10 Score=98.01 Aligned_cols=221 Identities=12% Similarity=0.060 Sum_probs=150.9
Q ss_pred eec--CCccccEEE-EecCCCceEEEecCCc---------cC-------CCccceEEEEECCCCcEEEEeCC------Cc
Q psy519 18 SFK--PETVEDVLA-NLESQKNLQSRYLPYY---------TS-------GHDMTVWSVEACSKGLALTGSRD------TT 72 (351)
Q Consensus 18 ~~s--p~~~~~~l~-~~~~~~~i~i~~~~~~---------~~-------~~~~~i~~~~~~~~~~~~~~~~d------~~ 72 (351)
.++ ++ +++|+ .+..++.|+++|+.+. .. ........+...|+|.++++..+ +.
T Consensus 88 ~~~~~~~--r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 88 NGKPNIE--RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGG 165 (462)
T ss_dssp TCCTTCC--SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCE
T ss_pred ccCCCcc--CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCe
Confidence 446 67 66655 5667889999998644 10 01124456778899944665555 78
Q ss_pred EEEEeCCCCeeeEEeeCCCC---CeEEEEEeCCCCEEEEEe-------------------CCCcEEEEeCCCCceeEEec
Q psy519 73 ARLWSLEQMYPLRIFVGHKQ---DVTCARFHPKITYIGTGS-------------------YDKAVRLWSITDGASVRVFS 130 (351)
Q Consensus 73 i~vw~~~~~~~~~~~~~~~~---~i~~i~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~ 130 (351)
+.++|.++++.+..+..... --..+.|+|+++.+++.. .+.+|.+||+.+++.+.++.
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 99999999999888863222 123578899999888874 36899999999988777775
Q ss_pred cC--CCCeEEEEE--ccCCCEEEEEec---CCCCCeEEEEEccCCce--eEEe--ccC----------------CCCEEE
Q psy519 131 DH--VSPVLSIAF--SPCGKYLASGGT---GSYDKAVRLWSITDGAS--VRVF--SDH----------------VSPVLS 183 (351)
Q Consensus 131 ~~--~~~i~~~~~--~~~~~~l~~~~~---~~~d~~i~i~d~~~~~~--~~~~--~~~----------------~~~i~~ 183 (351)
.. ......+.| +|++++++++.. ...++.|.+|....++. .+.+ ... ......
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 42 123455656 999999887763 00177888776655421 1111 110 234678
Q ss_pred EEECCCCcEEEEEcC-CCeEEEEEcCC---CcEEEEeeccCC-------------CCEEEEEEcCCCCEEEEEe
Q psy519 184 IAFSPCGKYLASGGE-DGLVLTHELTT---GRVISRFHLQEH-------------EPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 184 ~~~~~~~~~l~~~~~-dg~i~i~d~~~---~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~~ 240 (351)
+.++|||++|+++.. .+.|.+||+.. .+.+..+..... .....+.++|||++|+++.
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999999988875 67999999863 345555543311 1368899999999999887
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.38 E-value=8.2e-09 Score=85.02 Aligned_cols=239 Identities=10% Similarity=-0.036 Sum_probs=149.1
Q ss_pred cEEEEecCCCceEEEecCCccC----------CCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCC
Q psy519 26 DVLANLESQKNLQSRYLPYYTS----------GHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQMYPLRIFVGHKQD 93 (351)
Q Consensus 26 ~~l~~~~~~~~i~i~~~~~~~~----------~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~ 93 (351)
++|..+.. +.|+.++++.... .....+..++|++++ .+ ++-..++.|.++++........+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 44555443 4677777765411 012345789999864 55 66666789999999866543333333356
Q ss_pred eEEEEEeCCCCEEE-EEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeE
Q psy519 94 VTCARFHPKITYIG-TGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVR 172 (351)
Q Consensus 94 i~~i~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~ 172 (351)
...+++++++..|+ +....+.|.++++..................++++|++..|+.+......+.|..+++.... ..
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cE
Confidence 78999999765554 44556889999986443222222222567899999977777666542113688888875433 33
Q ss_pred Ee-ccCCCCEEEEEECCCCcEEE-EEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEe-CCCeEEEEe
Q psy519 173 VF-SDHVSPVLSIAFSPCGKYLA-SGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGS-LTGTVQFYG 249 (351)
Q Consensus 173 ~~-~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~~ 249 (351)
.+ .........++++|++..|+ +-...+.|..+|+........+ ........++.. +..|+.+. ..+.|..+|
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~--~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL--EGLQYPFAVTSY--GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE--ECCCSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe--cCCCCceEEEEe--CCEEEEEECCCCeEEEEe
Confidence 32 22334678999999876555 4455689999998754333322 223445677764 44555444 568999999
Q ss_pred CCCCceeeeee------cceeEEecCC
Q psy519 250 WPSASKIGIGV------YPRCAAQPVG 270 (351)
Q Consensus 250 ~~~~~~~~~~~------~~~~~~s~~~ 270 (351)
..+++.+.... ...+++.|++
T Consensus 236 ~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 236 LAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp TTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred CCCCCceEEEccccccccceeeecCcc
Confidence 99888766532 2345555554
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.36 E-value=4.2e-10 Score=105.18 Aligned_cols=266 Identities=11% Similarity=0.028 Sum_probs=170.8
Q ss_pred ccEEEEecCCCceEEEecCCc-----cCCCcc----------ce-EEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEee
Q psy519 25 EDVLANLESQKNLQSRYLPYY-----TSGHDM----------TV-WSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-----~~~~~~----------~i-~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 88 (351)
+..|++++.++.|.-+|..++ ...+.. .+ ..+.. .+++++.++.|+.|..+|.++|+.+..+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV-WKGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE-ECCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 456666777788888888766 111100 00 11122 24566888899999999999999987775
Q ss_pred CC--CCCeEEEEEeC---CCCEEEEEe------CCCcEEEEeCCCCceeEEeccCC------------------------
Q psy519 89 GH--KQDVTCARFHP---KITYIGTGS------YDKAVRLWSITDGASVRVFSDHV------------------------ 133 (351)
Q Consensus 89 ~~--~~~i~~i~~~~---~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~------------------------ 133 (351)
.. ......+..+| ++ .+++++ .+|.|+.||.++|+.+..+....
T Consensus 149 ~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 149 TRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp CCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred CcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 42 11111111122 44 444443 36899999999999887664210
Q ss_pred -------CCeEEEEEccCCCEEEEEecCCCCC-------------------eEEEEEccCCceeEEecc--CC-------
Q psy519 134 -------SPVLSIAFSPCGKYLASGGTGSYDK-------------------AVRLWSITDGASVRVFSD--HV------- 178 (351)
Q Consensus 134 -------~~i~~~~~~~~~~~l~~~~~~~~d~-------------------~i~i~d~~~~~~~~~~~~--~~------- 178 (351)
.....++++|++..++.+.. ++ .|..+|.++|+.+-.++. |.
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~---~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVG---NGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTAT 304 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECC---CEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCC
T ss_pred eecCCCCccccceeEcCCCCEEEEeCC---CCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCC
Confidence 01125788998888888876 54 499999999998877754 21
Q ss_pred CCEEEEEECCCCc---EEEEEcCCCeEEEEEcCCCcEEEEeeccCCC---------------------------------
Q psy519 179 SPVLSIAFSPCGK---YLASGGEDGLVLTHELTTGRVISRFHLQEHE--------------------------------- 222 (351)
Q Consensus 179 ~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------------------------------- 222 (351)
.+........+|+ .++.++.+|.++++|.++|+.+.........
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~ 384 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPA 384 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSC
T ss_pred CCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCC
Confidence 1222222223565 7888999999999999999988544322100
Q ss_pred -----CEEEEEEcCCCCEEEEEeC---------------------------------------------CCeEEEEeCCC
Q psy519 223 -----PVTSLVWSVTGETLVTGSL---------------------------------------------TGTVQFYGWPS 252 (351)
Q Consensus 223 -----~v~~~~~~~~~~~l~~~~~---------------------------------------------dg~i~i~~~~~ 252 (351)
.-..++|+|+..++++... +|.|..||+.+
T Consensus 385 ~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t 464 (689)
T 1yiq_A 385 FWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK 464 (689)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT
T ss_pred cccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC
Confidence 1123688898888776532 37899999999
Q ss_pred Cceeeeee----cceeEEecCCceeeeeeccceeeEEEeeeceeCceEEE
Q psy519 253 ASKIGIGV----YPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVVV 298 (351)
Q Consensus 253 ~~~~~~~~----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 298 (351)
++.+-... .....+...+..++.++.++ .++.|+..+|+..+.
T Consensus 465 G~~~W~~~~~~~~~~g~~~tagglvf~gt~dg---~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 465 QQAAWEVPYVTIFNGGTLSTAGNLVFEGSADG---RVIAYAADTGEKLWE 511 (689)
T ss_dssp TEEEEEEEESSSCCCCEEEETTTEEEEECTTS---EEEEEETTTCCEEEE
T ss_pred CCeEeEccCCCCccCccceECCCEEEEECCCC---cEEEEECCCCcccee
Confidence 98765422 22346666777777766555 677777777776543
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=6.2e-11 Score=101.64 Aligned_cols=227 Identities=10% Similarity=-0.063 Sum_probs=140.4
Q ss_pred EEEEecCCC----ceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEe----------CCCcEEEEeCCCCeeeEE
Q psy519 27 VLANLESQK----NLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGS----------RDTTARLWSLEQMYPLRI 86 (351)
Q Consensus 27 ~l~~~~~~~----~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~----------~d~~i~vw~~~~~~~~~~ 86 (351)
.+++...++ +|.++|..+. ......+ .+.++|+++. +++. .++.|.+||+.+++.+..
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 444444444 7789998887 2222234 7999999976 4443 368899999999999988
Q ss_pred eeCC-------CCCeEEEEEeCCCCEEEEEeC--CCcEEE--EeCCCCceeEEeccCC-------CCeEEEEEccCCCEE
Q psy519 87 FVGH-------KQDVTCARFHPKITYIGTGSY--DKAVRL--WSITDGASVRVFSDHV-------SPVLSIAFSPCGKYL 148 (351)
Q Consensus 87 ~~~~-------~~~i~~i~~~~~~~~l~~~~~--dg~i~i--~d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l 148 (351)
+..+ ......++++|||++++++.. +..+.+ +|+.+ +..+.... +.-.-++++++++.+
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~ 188 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLA 188 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEE
Confidence 8543 123567899999999998875 356888 88866 22221100 000012222333222
Q ss_pred EEEecC----------------------------------CCCCeEEEEEccCCc--eeEEecc-------CC---CCEE
Q psy519 149 ASGGTG----------------------------------SYDKAVRLWSITDGA--SVRVFSD-------HV---SPVL 182 (351)
Q Consensus 149 ~~~~~~----------------------------------~~d~~i~i~d~~~~~--~~~~~~~-------~~---~~i~ 182 (351)
+..... +. +.+.+.|+.... .+..+.. +. ....
T Consensus 189 ~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 189 ASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp EEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS
T ss_pred EEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcce
Confidence 221110 00 345555554321 1111110 00 0111
Q ss_pred EEEECCCCcEEEEEcC---------CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCC-EEEEEe-CCCeEEEEeCC
Q psy519 183 SIAFSPCGKYLASGGE---------DGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGE-TLVTGS-LTGTVQFYGWP 251 (351)
Q Consensus 183 ~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~i~~~~ 251 (351)
.+.++||++.++++.. ++.+.++|+.+.+.+..+.... ....++|+|||+ ++++.. .++.|.++|+.
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~--~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH--DSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC--CcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 2689999988887643 2356799999999988876543 689999999998 455565 58999999999
Q ss_pred CCceeeeeec
Q psy519 252 SASKIGIGVY 261 (351)
Q Consensus 252 ~~~~~~~~~~ 261 (351)
+++.+....+
T Consensus 346 t~kvv~~I~v 355 (368)
T 1mda_H 346 SDQDQSSVEL 355 (368)
T ss_dssp SCEEEEECCC
T ss_pred CCcEEEEEEC
Confidence 9998876443
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.35 E-value=1e-09 Score=89.20 Aligned_cols=194 Identities=8% Similarity=0.005 Sum_probs=140.6
Q ss_pred ceEEEEECCCCcE-EEEeC--CCcEEEEeCCCCeeeEEeeCCC-CCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeE
Q psy519 52 TVWSVEACSKGLA-LTGSR--DTTARLWSLEQMYPLRIFVGHK-QDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVR 127 (351)
Q Consensus 52 ~i~~~~~~~~~~~-~~~~~--d~~i~vw~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 127 (351)
....++|++++.+ ++.+. ++.|+++|+.+++.+..+.-.. .....+++.. +...++.-.++.+.++|..+.+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEE
Confidence 3578999998877 55543 6899999999999888775322 2233566653 2344444567899999999999888
Q ss_pred EeccC-CCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCC-----CCEEEEEECCCCcEEEEEcCCCe
Q psy519 128 VFSDH-VSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHV-----SPVLSIAFSPCGKYLASGGEDGL 201 (351)
Q Consensus 128 ~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~ 201 (351)
.+... .. ...+++||+.++++.. ++.|.++|..+.+.+..+.-.. ..+..+.|. ++...+....++.
T Consensus 101 ~i~~g~~~---g~glt~Dg~~l~vs~g---s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 101 NFTHQMKD---GWGLATDGKILYGSDG---TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEECCSSS---CCEEEECSSSEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EEECCCCC---eEEEEECCCEEEEECC---CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 88533 22 2446668888887765 8899999999988887765321 236678888 7766655556889
Q ss_pred EEEEEcCCCcEEEEeeccC------------CCCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCC
Q psy519 202 VLTHELTTGRVISRFHLQE------------HEPVTSLVWSVTGETLV-TGSLTGTVQFYGWPSA 253 (351)
Q Consensus 202 i~i~d~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~ 253 (351)
|.+.|..+++.+..+.... ......++|+|+++.++ ++...+.+.+.++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999999999999887531 13578999999987554 5556788888887653
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.33 E-value=1.1e-09 Score=102.16 Aligned_cols=264 Identities=11% Similarity=0.045 Sum_probs=172.6
Q ss_pred ccEEEEecCCCceEEEecCCc-------cCCCcc---------ceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEee
Q psy519 25 EDVLANLESQKNLQSRYLPYY-------TSGHDM---------TVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-------~~~~~~---------~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 88 (351)
+..|++++.++.|.-+|..++ ...... ....+++ .+++++.++.|+.+..+|.++++.+..+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 345666666788888887766 111000 0012222 24566888899999999999999988886
Q ss_pred CC-C----CCeEE-EEEeCCCCEEEEEeC------CCcEEEEeCCCCceeEEeccCCCC---------------------
Q psy519 89 GH-K----QDVTC-ARFHPKITYIGTGSY------DKAVRLWSITDGASVRVFSDHVSP--------------------- 135 (351)
Q Consensus 89 ~~-~----~~i~~-i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~--------------------- 135 (351)
.+ . ..+.. ... .+..+++++. ++.|+.+|..+|+.+..+......
T Consensus 156 ~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp TTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred CCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 54 2 11211 111 1345555543 689999999999988776432111
Q ss_pred -----------eEEEEEccCCCEEEEEecCCCCC-------------------eEEEEEccCCceeEEecc--CC-----
Q psy519 136 -----------VLSIAFSPCGKYLASGGTGSYDK-------------------AVRLWSITDGASVRVFSD--HV----- 178 (351)
Q Consensus 136 -----------i~~~~~~~~~~~l~~~~~~~~d~-------------------~i~i~d~~~~~~~~~~~~--~~----- 178 (351)
...++++|++..++.+.. ++ .|..+|.++++.+-.++. |.
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~---~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~ 310 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTG---NGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYT 310 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECC---CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECC---CCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccc
Confidence 135788998888888765 43 599999999998877653 21
Q ss_pred --CCEEEEEECCCC---cEEEEEcCCCeEEEEEcCCCcEEEEeeccCCC----------CE-------------------
Q psy519 179 --SPVLSIAFSPCG---KYLASGGEDGLVLTHELTTGRVISRFHLQEHE----------PV------------------- 224 (351)
Q Consensus 179 --~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------~v------------------- 224 (351)
.....+....+| ..++.++.+|.++++|.++|+.+..+...... ++
T Consensus 311 ~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~ 390 (677)
T 1kb0_A 311 STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPY 390 (677)
T ss_dssp CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTT
T ss_pred cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcc
Confidence 112223333477 68889999999999999999988766532111 01
Q ss_pred -----EEEEEcCCCCEEEEEeC-------------------------------------------CCeEEEEeCCCCcee
Q psy519 225 -----TSLVWSVTGETLVTGSL-------------------------------------------TGTVQFYGWPSASKI 256 (351)
Q Consensus 225 -----~~~~~~~~~~~l~~~~~-------------------------------------------dg~i~i~~~~~~~~~ 256 (351)
..++++|++.++++... .|.|..||+.+++.+
T Consensus 391 G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~ 470 (677)
T 1kb0_A 391 GAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA 470 (677)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred cccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE
Confidence 15688998888877543 278999999999876
Q ss_pred eeee----cceeEEecCCceeeeeeccceeeEEEeeeceeCceEE
Q psy519 257 GIGV----YPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVV 297 (351)
Q Consensus 257 ~~~~----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 297 (351)
-... .....+...+..+.+++.++ .++.++..+|+...
T Consensus 471 W~~~~~~~~~~g~~~~~g~~v~~g~~dg---~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 471 WSVEHVSPWNGGTLTTAGNVVFQGTADG---RLVAYHAATGEKLW 512 (677)
T ss_dssp EEEEESSSCCCCEEEETTTEEEEECTTS---EEEEEETTTCCEEE
T ss_pred eecCCCCCCcCcceEeCCCEEEEECCCC---cEEEEECCCCceee
Confidence 4422 23456677777777665555 56666666666543
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.33 E-value=6.3e-09 Score=90.22 Aligned_cols=255 Identities=9% Similarity=0.008 Sum_probs=162.0
Q ss_pred ccEEEEecCCCceEEEecCCc-------cCCC-------ccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCC
Q psy519 25 EDVLANLESQKNLQSRYLPYY-------TSGH-------DMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGH 90 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-------~~~~-------~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~ 90 (351)
+..+++++.++.|..+|..++ .... ...+.+.-...++.++.++.++.|..+|.++++.+..+...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 566777778889999998765 1110 22233322234567788889999999999999988776544
Q ss_pred CCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCe-----EEEEEccCCCEEEEEecCCCCCeEEEEEc
Q psy519 91 KQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPV-----LSIAFSPCGKYLASGGTGSYDKAVRLWSI 165 (351)
Q Consensus 91 ~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~l~~~~~~~~d~~i~i~d~ 165 (351)
.......... +..+++++.++.+..+|..+++.+.......... ...... +..++++.. ++.+..+|.
T Consensus 133 ~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~---~g~l~~~d~ 205 (376)
T 3q7m_A 133 GEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGD---NGRVSAVLM 205 (376)
T ss_dssp SCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCT---TTEEEEEET
T ss_pred CceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcC---CCEEEEEEC
Confidence 3222222222 4477788889999999999999887765322111 112222 456777776 899999999
Q ss_pred cCCceeEEeccCCCC----EE---EEEECC--CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEE
Q psy519 166 TDGASVRVFSDHVSP----VL---SIAFSP--CGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETL 236 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~----i~---~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 236 (351)
++++.+......... +. .+.-.| .+..+++++.++.+..+|.++++.+-.... .....+.. ++..+
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~---~~~~~~~~--~~~~l 280 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL---GSVNDFIV--DGNRI 280 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC---CCEEEEEE--ETTEE
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC---CCCCCceE--ECCEE
Confidence 999887766432110 00 011122 356777788899999999999998766542 23444444 46678
Q ss_pred EEEeCCCeEEEEeCCCCceeeeee------cceeEEecCCceeeeeeccceeeEEEeeeceeCceE
Q psy519 237 VTGSLTGTVQFYGWPSASKIGIGV------YPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 237 ~~~~~dg~i~i~~~~~~~~~~~~~------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 296 (351)
+.++.++.+..+|..+++.+-... ...... .+..+.++..++ .+..++..+|+..
T Consensus 281 ~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g---~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 281 YLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEG---YLHWINVEDGRFV 341 (376)
T ss_dssp EEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTS---EEEEEETTTCCEE
T ss_pred EEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCC---eEEEEECCCCcEE
Confidence 888889999999999998765432 111222 234455555554 4556666667644
No 236
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.33 E-value=1.5e-09 Score=94.25 Aligned_cols=224 Identities=10% Similarity=-0.005 Sum_probs=146.4
Q ss_pred ccEEEEecCCCceEEEecCCc-----cCCCccceE-EEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCe----
Q psy519 25 EDVLANLESQKNLQSRYLPYY-----TSGHDMTVW-SVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDV---- 94 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~-~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i---- 94 (351)
+..+++++.++.|..+|..++ .... ..+. .... .++.++.++.++.+..+|.++++.+..+.......
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~-~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVA-GEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECS-SCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCC-CceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 556777778899999998765 1111 1111 1111 25666888899999999999999887775432211
Q ss_pred -EEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCC-------eEEEEEcc--CCCEEEEEecCCCCCeEEEEE
Q psy519 95 -TCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSP-------VLSIAFSP--CGKYLASGGTGSYDKAVRLWS 164 (351)
Q Consensus 95 -~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------i~~~~~~~--~~~~l~~~~~~~~d~~i~i~d 164 (351)
...... +..++.++.++.+..+|..+++.+......... +..+...| .+..+++++. ++.+..+|
T Consensus 181 ~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~---~g~l~~~d 255 (376)
T 3q7m_A 181 ESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY---NGNLTALD 255 (376)
T ss_dssp CCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT---TSCEEEEE
T ss_pred CCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec---CcEEEEEE
Confidence 112222 356777888999999999999887766422110 00011111 3466777777 89999999
Q ss_pred ccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCe
Q psy519 165 ITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGT 244 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 244 (351)
.++++.+..... .....+.. ++..+++++.++.+..+|..+++.+-............... .+..|++++.+|.
T Consensus 256 ~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~ 329 (376)
T 3q7m_A 256 LRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGY 329 (376)
T ss_dssp TTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSE
T ss_pred CCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCe
Confidence 999988766542 23444444 36677788889999999999999876654222222233333 2567888899999
Q ss_pred EEEEeCCCCceeeeeec
Q psy519 245 VQFYGWPSASKIGIGVY 261 (351)
Q Consensus 245 i~i~~~~~~~~~~~~~~ 261 (351)
+.++|..+++.+.....
T Consensus 330 l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 330 LHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCcEEEEEec
Confidence 99999999988765433
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.32 E-value=1.3e-09 Score=88.47 Aligned_cols=200 Identities=11% Similarity=0.043 Sum_probs=139.3
Q ss_pred eeeEEeeCCCC--CeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCC-CCeEEEEEccCCCEEEEEecCCC
Q psy519 82 YPLRIFVGHKQ--DVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHV-SPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 82 ~~~~~~~~~~~--~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
+.+.++. |.. ....+.|++++.++++.+. ++.|.++|+.+++.+..+.-.. .....+++. ++.++.+.. .
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~--~ 84 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVW--L 84 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEET--T
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEe--c
Confidence 4455553 443 3689999998755555443 5799999999999888765222 222345554 556665554 2
Q ss_pred CCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC----CCEEEEEEcCC
Q psy519 157 DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH----EPVTSLVWSVT 232 (351)
Q Consensus 157 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~ 232 (351)
++.+.++|..+.+.+.++...... ...+++||+.++++..++.|.++|..+.+.+..+..... ..++.+.|. +
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C
Confidence 899999999999988888543111 233556788777777889999999999998888865432 246788888 6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeeec------------------ceeEEecCCcee-eeeeccceeeEEEeee
Q psy519 233 GETLVTGSLTGTVQFYGWPSASKIGIGVY------------------PRCAAQPVGFEA-ATLAANSRVRTLREMH 289 (351)
Q Consensus 233 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~------------------~~~~~s~~~~~~-~~~~~~~~~~~~~~~~ 289 (351)
+...+....++.|.+.|..+++.+....+ +.++++|++..+ +++.....+..+++-.
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 75555555678999999999998876433 478999998754 4454566666666644
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.32 E-value=1.3e-08 Score=83.88 Aligned_cols=216 Identities=9% Similarity=0.042 Sum_probs=141.7
Q ss_pred cceEEeeecCCccccEE-EEecCCCceEEEecCCc-----cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCee
Q psy519 12 KHFIQNSFKPETVEDVL-ANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQMYP 83 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l-~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~~ 83 (351)
..+..++|+|+ +..| ++-...+.|..++.... ..........+++.++ +.+ ++-...+.|.+++++....
T Consensus 36 ~~~~gi~~d~~--~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDCV--DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEETT--TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CcEEEEEEecC--CCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 34568999996 5544 45555788999998765 1122246788999986 455 6666678999999875432
Q ss_pred eEEeeCCCCCeEEEEEeCCCCEEEEEeC---CCcEEEEeCCCCceeEEe-ccCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 84 LRIFVGHKQDVTCARFHPKITYIGTGSY---DKAVRLWSITDGASVRVF-SDHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 84 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
.............++++|++..|+.+.. .+.|..+++... ....+ .........++++|++..|+.+... .+.
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~--~~~ 190 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAG--THR 190 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETT--TTE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECC--CCE
Confidence 2222222246789999997666655543 368888887643 33332 2233567899999988877776542 678
Q ss_pred EEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCC
Q psy519 160 VRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGE 234 (351)
Q Consensus 160 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 234 (351)
|..+|+........... ......++.. ++..+++...++.|..+|..+++.+..+..........+++.|++.
T Consensus 191 I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 99999875443333332 2344667664 4444455556789999999999988887643323467888888764
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.28 E-value=8.9e-13 Score=114.17 Aligned_cols=214 Identities=15% Similarity=0.083 Sum_probs=117.1
Q ss_pred ccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCC-eE-E
Q psy519 25 EDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQD-VT-C 96 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-i~-~ 96 (351)
+..+++++.|+.|+.||..++ ... +.+.+..+..++.+ ++++.|+.|+.||.++++.+..+..+... +. .
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 778999999999999998876 212 34444445566655 66789999999999998877665433211 10 0
Q ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEecc
Q psy519 97 ARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSD 176 (351)
Q Consensus 97 i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 176 (351)
..+. ++..+++++.++.++.||..+|+.+..+..+. ...++|++..+++++. ++.|+.||.++++.+..+..
T Consensus 87 p~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~---dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 87 PCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRT---EYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC--------------------------EEEEEE---EEEEECCCSSSSSCCCEEEE
T ss_pred ceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEec---CCEEEEEECCCCCEEEeEec
Confidence 1111 34567788889999999999999887776443 2345678888888888 99999999999987655532
Q ss_pred CCCCEEEEEECCCC---cEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEE-EEEcCCCCEE----EEEeCCCeEEEE
Q psy519 177 HVSPVLSIAFSPCG---KYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTS-LVWSVTGETL----VTGSLTGTVQFY 248 (351)
Q Consensus 177 ~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l----~~~~~dg~i~i~ 248 (351)
.. .....+.++. ..+++++.+|.++.||.++++.+-.+.. ..++.. ..+++++... +.+ ++.++.+
T Consensus 159 ~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~l 232 (369)
T 2hz6_A 159 FD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY--ASPVVAFYVWQREGLRKVMHINVA--VETLRYL 232 (369)
T ss_dssp EE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC--SSCEEEEEECTTSSCEEECCEEEE--HHHHHHH
T ss_pred cc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC--CCceEEEEEecCCceEeccceeec--ccceeee
Confidence 11 1223333332 4577788899999999999998776653 344443 4455565432 122 3345555
Q ss_pred eCCCCc
Q psy519 249 GWPSAS 254 (351)
Q Consensus 249 ~~~~~~ 254 (351)
|..+++
T Consensus 233 d~~tG~ 238 (369)
T 2hz6_A 233 TFMSGE 238 (369)
T ss_dssp HHHHHH
T ss_pred ehhcCC
Confidence 554444
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.27 E-value=6.5e-09 Score=88.16 Aligned_cols=232 Identities=7% Similarity=-0.037 Sum_probs=151.9
Q ss_pred ceEEeeecCCccccEEEEecCCCceEEEecCCc-cCC-----------------------CccceEEEEECC-CCcEEEE
Q psy519 13 HFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-TSG-----------------------HDMTVWSVEACS-KGLALTG 67 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-~~~-----------------------~~~~i~~~~~~~-~~~~~~~ 67 (351)
....++|+|+ +.++.++..++.|..|+.... ... ....+..+++.+ ++.++.+
T Consensus 20 ~p~~i~~d~~--g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDST--NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCCCEECCTT--CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CceEEEEcCC--CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 3456889999 997888888899999987654 110 013578899997 7888666
Q ss_pred eCCCcEEEEeCCCCeeeEEeeC-----CCCCeEEEEEeC-CCCEEEEEeC-----------------CCcEEEEeCCCCc
Q psy519 68 SRDTTARLWSLEQMYPLRIFVG-----HKQDVTCARFHP-KITYIGTGSY-----------------DKAVRLWSITDGA 124 (351)
Q Consensus 68 ~~d~~i~vw~~~~~~~~~~~~~-----~~~~i~~i~~~~-~~~~l~~~~~-----------------dg~i~i~d~~~~~ 124 (351)
...+.+..+|..+++.. .+.. .......+++.+ +|++.++... ++.|..+|..+++
T Consensus 98 d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 65666888998765432 2211 113467899999 8987766432 3678899987665
Q ss_pred eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc--eeEEeccCCCCEEEEEECCCCcEEEEEcC----
Q psy519 125 SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSPCGKYLASGGE---- 198 (351)
Q Consensus 125 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---- 198 (351)
....... ......++++|+++.|+++... ++.|..|++.... ....+....+ ...+++.++|++.++...
T Consensus 177 ~~~~~~~-~~~p~gia~~~dg~~lyv~d~~--~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 177 TTLLLKE-LHVPGGAEVSADSSFVLVAEFL--SHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEEEE-ESCCCEEEECTTSSEEEEEEGG--GTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred EEEeccC-CccCcceEECCCCCEEEEEeCC--CCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc
Confidence 4332221 2334679999999977766431 6899999987521 1222211223 788999999987666544
Q ss_pred ------CCeEEEEEcCCCcEEEEeeccC---CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy519 199 ------DGLVLTHELTTGRVISRFHLQE---HEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 199 ------dg~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
.+.|..+|. .++.+..+.... ...+..+++ .++++.++...++.|..+++...
T Consensus 253 ~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp STTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred cccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 467888887 477777665433 234666766 35665566556788999987643
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.25 E-value=3.8e-09 Score=84.76 Aligned_cols=181 Identities=13% Similarity=0.083 Sum_probs=130.7
Q ss_pred ceEEEEECCCCcE-EEEeCCC--cEEEEeCCCCeeeEEeeCCCCC-eEEEEEeCCCCEEEEE-eCCCcEEEEeCCCCcee
Q psy519 52 TVWSVEACSKGLA-LTGSRDT--TARLWSLEQMYPLRIFVGHKQD-VTCARFHPKITYIGTG-SYDKAVRLWSITDGASV 126 (351)
Q Consensus 52 ~i~~~~~~~~~~~-~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~-i~~i~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~ 126 (351)
-...+.|+ ++.+ .+.+.+| .|+++|+++++.+..+...... --.++.. ++.|+.. -.++.+.+||..+.+.+
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEE
Confidence 34778888 5666 7777765 8999999999998887644322 1234444 4455444 45889999999999999
Q ss_pred EEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCC-----CCEEEEEECCCCcEEEEEcCCCe
Q psy519 127 RVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHV-----SPVLSIAFSPCGKYLASGGEDGL 201 (351)
Q Consensus 127 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~ 201 (351)
.++.-.. ....+.++++.|+.+.. ++.|.++|..+.+.+..+.... ..++.+.|. +|+..+..-.++.
T Consensus 121 ~ti~~~~---eG~glt~dg~~L~~SdG---s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~ 193 (262)
T 3nol_A 121 RSFNYDG---EGWGLTHNDQYLIMSDG---TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK 193 (262)
T ss_dssp EEEECSS---CCCCEEECSSCEEECCS---SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EEEECCC---CceEEecCCCEEEEECC---CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCe
Confidence 8886432 22334457888887765 7889999999998887765421 335567776 7776666667889
Q ss_pred EEEEEcCCCcEEEEeeccC-----------CCCEEEEEEcCCCCEEEEEeCC
Q psy519 202 VLTHELTTGRVISRFHLQE-----------HEPVTSLVWSVTGETLVTGSLT 242 (351)
Q Consensus 202 i~i~d~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~d 242 (351)
|.+.|.++++.+..+.... ....+.++|+|+++.|++.+..
T Consensus 194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 9999999999998887531 1356899999998887777653
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.24 E-value=8.5e-10 Score=98.63 Aligned_cols=225 Identities=11% Similarity=0.005 Sum_probs=155.4
Q ss_pred CCccccEEEEecC-CCceEEEecCCc-----cC-CCccceEEEEE-C-CCCcE-EEEe------------------CCCc
Q psy519 21 PETVEDVLANLES-QKNLQSRYLPYY-----TS-GHDMTVWSVEA-C-SKGLA-LTGS------------------RDTT 72 (351)
Q Consensus 21 p~~~~~~l~~~~~-~~~i~i~~~~~~-----~~-~~~~~i~~~~~-~-~~~~~-~~~~------------------~d~~ 72 (351)
|| |++|..... ++.|.+.|+... .. .....+..+++ . |++.+ ++++ .++.
T Consensus 99 ~D--G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YD--GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EE--EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cC--CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 37 887776554 567999999886 11 12345778887 4 88888 4442 2467
Q ss_pred EEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCC--------------------------------------c
Q psy519 73 ARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDK--------------------------------------A 114 (351)
Q Consensus 73 i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg--------------------------------------~ 114 (351)
+.+.|.++.+....+.-.. ....++++|+|+++++.+.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999998888776333 356788999999998887543 4
Q ss_pred EEEEeCCC--Cce-eEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc------------eeEEeccCCC
Q psy519 115 VRLWSITD--GAS-VRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA------------SVRVFSDHVS 179 (351)
Q Consensus 115 i~i~d~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~------------~~~~~~~~~~ 179 (351)
|.+.|.++ ++. +..+.. .....++.++|||+++++++.. +..|.++|+.+.+ ...... -..
T Consensus 256 V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~--s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~ 331 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKL--SPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGL 331 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTT--SSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCS
T ss_pred EEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCC--CCeEEEEECcccccccccccCcccceEEEcC-CCC
Confidence 67777776 444 344432 2345679999999999888754 8899999998653 233333 334
Q ss_pred CEEEEEECCCCcEEEEEcCCCeEEEEEcCC----------CcEEEEeeccCCCCEE------EEEEcCCCCEEEEEeCC-
Q psy519 180 PVLSIAFSPCGKYLASGGEDGLVLTHELTT----------GRVISRFHLQEHEPVT------SLVWSVTGETLVTGSLT- 242 (351)
Q Consensus 180 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~~v~------~~~~~~~~~~l~~~~~d- 242 (351)
....++|+|+|...++.-.|++|..||+.. .+.+.++..+ ..+- .+.++|||++|+++..-
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~--yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH--YQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS--SCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc--cccccceeccceEeCCCCCEEEEcCCCC
Confidence 578999999994444556699999999976 5566666542 2221 22457899999987652
Q ss_pred -CeE-----------EEEeCCCCc
Q psy519 243 -GTV-----------QFYGWPSAS 254 (351)
Q Consensus 243 -g~i-----------~i~~~~~~~ 254 (351)
.++ .++|+..++
T Consensus 410 kdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 410 KDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp TTSSCCCCSSCCEEEEEEECSSSS
T ss_pred ccccccCCCCCCCcceEEEcCCCc
Confidence 234 889996554
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.24 E-value=1.4e-09 Score=92.41 Aligned_cols=214 Identities=16% Similarity=0.032 Sum_probs=143.6
Q ss_pred cEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeC
Q psy519 26 DVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHP 101 (351)
Q Consensus 26 ~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~ 101 (351)
..|..++.++.+..++.... ...+...+.++...+++.+..++.++.+..+|.+ ++....+......+.++...+
T Consensus 108 ~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~ 186 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK 186 (330)
T ss_dssp TEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT
T ss_pred CEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC
Confidence 34556667788888887622 2223334556667778888778888999999988 777766665555666777777
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCE
Q psy519 102 KITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPV 181 (351)
Q Consensus 102 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 181 (351)
++.+.+ ++ +.+..+| .+++...........+.++...++|.+.+ ++. ++.+..+|. +++.+..+......+
T Consensus 187 ~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~---~~gl~~~~~-~g~~~~~~~~~~~~~ 257 (330)
T 3hxj_A 187 DGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSL---DGHLYAINP-DGTEKWRFKTGKRIE 257 (330)
T ss_dssp TCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEE-EET---TTEEEEECT-TSCEEEEEECSSCCC
T ss_pred CCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEE-EcC---CCeEEEECC-CCCEeEEeeCCCCcc
Confidence 776544 44 7789999 77777766655556677888888775544 445 678888874 566665555444334
Q ss_pred EEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy519 182 LSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 182 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
..+...+++ .|.+++.+|.+..+|. +++....+.. ....+.++...+++. |..++.+|.+++...+..
T Consensus 258 ~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~-~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 258 SSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFET-GSWIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp SCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEEC-SSCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred ccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEc-CCccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 445555555 4666777888999996 6776666653 234566777777776 556788899988876544
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.23 E-value=4.9e-09 Score=84.14 Aligned_cols=170 Identities=12% Similarity=0.117 Sum_probs=120.0
Q ss_pred eeeEEeeCCCCC--eEEEEEeCCCCEEEEEeCCC--cEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC
Q psy519 82 YPLRIFVGHKQD--VTCARFHPKITYIGTGSYDK--AVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 82 ~~~~~~~~~~~~--i~~i~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d 157 (351)
+.++++ .|... ...+.|+ ++.++.+.+.+| .|+.+|+.+++.+..+... .........++++.|..... .+
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw--~~ 106 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTW--KN 106 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEES--SS
T ss_pred EEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEe--eC
Confidence 345555 35443 4789998 667677777666 8999999999998887543 33333333334556555543 28
Q ss_pred CeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC----CCEEEEEEcCCC
Q psy519 158 KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH----EPVTSLVWSVTG 233 (351)
Q Consensus 158 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~ 233 (351)
+.+.+||..+.+.+.++..... -..++ +|++.|+.+..++.|.++|..+.+.+..+..... ..++.+.|. +|
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~e-G~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGE-GWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSC-CCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECccCcEEEEEECCCC-ceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 8999999999999998865332 23344 5677777777788899999999999988876432 345668886 67
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeee
Q psy519 234 ETLVTGSLTGTVQFYGWPSASKIGIGV 260 (351)
Q Consensus 234 ~~l~~~~~dg~i~i~~~~~~~~~~~~~ 260 (351)
++.+..-.++.|.+.|..+++.+....
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEE
Confidence 655555568899999999999887633
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.22 E-value=1.3e-09 Score=92.53 Aligned_cols=212 Identities=15% Similarity=0.033 Sum_probs=141.5
Q ss_pred cEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEe
Q psy519 26 DVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFH 100 (351)
Q Consensus 26 ~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~ 100 (351)
..|..++.++.|..|| .++ ...+...+.++...+++.+..++.+ +..+|. +++....+...........+.
T Consensus 31 g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~ 106 (330)
T 3hxj_A 31 GTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF 106 (330)
T ss_dssp SCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE
T ss_pred CeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE
Confidence 3466667788899999 554 2233445677888888888555555 888886 666554443333222333333
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCC
Q psy519 101 PKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSP 180 (351)
Q Consensus 101 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 180 (351)
+..++.++.++.+..+|.. ++...........+.++...+++.+ ..++. ++.|..+|.. ++....+......
T Consensus 107 --~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l-~vgt~---~~~l~~~d~~-g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 107 --EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTI-YVGSN---DNYLYAINPD-GTEKWRFKTNDAI 178 (330)
T ss_dssp --TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCE-EEECT---TSEEEEECTT-SCEEEEEECSSCC
T ss_pred --CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEE-EEEcC---CCEEEEECCC-CCEeEEEecCCCc
Confidence 4567778888999999988 7776666555555666777777764 44555 7999999988 7777666655556
Q ss_pred EEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy519 181 VLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKI 256 (351)
Q Consensus 181 i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~ 256 (351)
+..+...+++.+. +++ +.+..+| .+++....+.. ....+.++...++|. |..++.++.+..++. +++.+
T Consensus 179 ~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~ 247 (330)
T 3hxj_A 179 TSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYA-GYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEK 247 (330)
T ss_dssp CSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECC-SSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEE
T ss_pred eeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEcc-CCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEe
Confidence 6677777777754 444 7799999 77777666542 335677888888876 455667788888874 44444
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.21 E-value=4.4e-09 Score=84.40 Aligned_cols=179 Identities=11% Similarity=0.008 Sum_probs=129.3
Q ss_pred ceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCe--EEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEE
Q psy519 52 TVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDV--TCARFHPKITYIGTGSYDKAVRLWSITDGASVRV 128 (351)
Q Consensus 52 ~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i--~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 128 (351)
-...+.|+. +.+ ++.+.+|.|+++|+++++.+..+ -.. .. -.+++..+ ++.+..-.++.+.+||..+.+.+.+
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEE
Confidence 346788875 455 88899999999999999988776 222 33 33555432 3444455689999999999999988
Q ss_pred eccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCC-----CCEEEEEECCCCcEEEEEcCCCeEE
Q psy519 129 FSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHV-----SPVLSIAFSPCGKYLASGGEDGLVL 203 (351)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~i~ 203 (351)
+.-... -..++ ++++.|+.+.. ++.|.++|..+.+.+..+.... ..+..+.|. +|+..+..-.+..|.
T Consensus 132 i~~~~e-GwGLt--~Dg~~L~vSdG---s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 132 TRYSGE-GWGLC--YWNGKLVRSDG---GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVL 204 (268)
T ss_dssp EECSSC-CCCEE--EETTEEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEE
T ss_pred EeCCCc-eeEEe--cCCCEEEEECC---CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEE
Confidence 864322 23344 57888888765 8899999999998888765322 245677877 777666665688999
Q ss_pred EEEcCCCcEEEEeecc------------CCCCEEEEEEcCCCCEEEEEeC
Q psy519 204 THELTTGRVISRFHLQ------------EHEPVTSLVWSVTGETLVTGSL 241 (351)
Q Consensus 204 i~d~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~~~~~ 241 (351)
+.|.++++.+..+... ...-.+.++|+|+++.|++.+.
T Consensus 205 vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 205 EIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 9999999999888653 1136789999998766655543
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.16 E-value=1.8e-07 Score=78.63 Aligned_cols=224 Identities=9% Similarity=0.039 Sum_probs=141.4
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc---cCCCccceEEEEECCCCcEEEEe-CC-C-cEEEEeCCCCeeeE
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---TSGHDMTVWSVEACSKGLALTGS-RD-T-TARLWSLEQMYPLR 85 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~-~d-~-~i~vw~~~~~~~~~ 85 (351)
.....++|+|+ +.++++-..++.|..++.... ..........+++.++|+++.+. .. + .|..++..+++...
T Consensus 32 ~~pegia~~~~--g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPD--GTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTT--SCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCC--CCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 34567899999 997777767889999987655 11223468899999999884443 32 2 47777877776543
Q ss_pred EeeC-CCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCce-eEEe---------ccCCCCeEEEEEccCCCEEEEEecC
Q psy519 86 IFVG-HKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGAS-VRVF---------SDHVSPVLSIAFSPCGKYLASGGTG 154 (351)
Q Consensus 86 ~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~---------~~~~~~i~~~~~~~~~~~l~~~~~~ 154 (351)
.... .......++..+++..+++...++.|+.+|..+++. +... .........+ +|+++.|+++...
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 3221 222345555556555555555688999999876431 1110 0111234555 7888877776542
Q ss_pred CCCCeEEEEEccC-Cce--eEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC-CCCEEEEEEc
Q psy519 155 SYDKAVRLWSITD-GAS--VRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQE-HEPVTSLVWS 230 (351)
Q Consensus 155 ~~d~~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~ 230 (351)
.+.|..||+.. ++. ...+... .....++++++|+++++....+.|.++|.. ++......... ...+.+++|.
T Consensus 188 --~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 188 --KMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp --TTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred --CCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe
Confidence 68899999874 321 1222111 234678999999887776677889999975 65533222222 2568999998
Q ss_pred ---CCCCEEEEEeCCC
Q psy519 231 ---VTGETLVTGSLTG 243 (351)
Q Consensus 231 ---~~~~~l~~~~~dg 243 (351)
|+++.|++++..+
T Consensus 264 g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 264 QTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CSTTTTTEEEEEECTT
T ss_pred cccCCCCEEEEECCCC
Confidence 8888777766543
No 248
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.15 E-value=7e-08 Score=76.80 Aligned_cols=182 Identities=10% Similarity=0.004 Sum_probs=130.2
Q ss_pred cceEEEEECCCCcE-EEEeCC--CcEEEEeCCCCeeeEEeeCCCCC-eEEEEEeCCCCEEEEEeCCCcEEEEeCCCCcee
Q psy519 51 MTVWSVEACSKGLA-LTGSRD--TTARLWSLEQMYPLRIFVGHKQD-VTCARFHPKITYIGTGSYDKAVRLWSITDGASV 126 (351)
Q Consensus 51 ~~i~~~~~~~~~~~-~~~~~d--~~i~vw~~~~~~~~~~~~~~~~~-i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 126 (351)
.-...+.|++ +.+ .+.+.+ ..|+++|+++++.+......... --.++... ++.....-.++.+.+||..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEE
Confidence 4456888987 555 776765 48999999999998877543322 13344442 334444556899999999999999
Q ss_pred EEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCC-----CCEEEEEECCCCcEEEEEcCCCe
Q psy519 127 RVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHV-----SPVLSIAFSPCGKYLASGGEDGL 201 (351)
Q Consensus 127 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~ 201 (351)
.++...... ..++ +++..|+++.. ++.|.++|..+.+.+..++... ..+..+.|. +|+.++..-.+..
T Consensus 99 ~ti~~~~~G-wglt--~dg~~L~vSdg---s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~ 171 (243)
T 3mbr_X 99 ARFRYPGEG-WALT--SDDSHLYMSDG---TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR 171 (243)
T ss_dssp EEEECSSCC-CEEE--ECSSCEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred EEEeCCCCc-eEEe--eCCCEEEEECC---CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe
Confidence 988743322 3444 57777777765 8899999999998887775422 345667776 6776666656789
Q ss_pred EEEEEcCCCcEEEEeeccC------------CCCEEEEEEcCCCCEEEEEeC
Q psy519 202 VLTHELTTGRVISRFHLQE------------HEPVTSLVWSVTGETLVTGSL 241 (351)
Q Consensus 202 i~i~d~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~~ 241 (351)
|.+.|.++++.+..+.... ..-.+.++|+|+++.|++.+.
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 9999999999998886431 135789999998877766654
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.15 E-value=2.3e-08 Score=80.27 Aligned_cols=165 Identities=13% Similarity=0.083 Sum_probs=118.5
Q ss_pred eeeEEeeCCCC--CeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeE--EEEEccCCCEEEEEecCCCC
Q psy519 82 YPLRIFVGHKQ--DVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVL--SIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 82 ~~~~~~~~~~~--~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~~~~~~~~d 157 (351)
+.+.++ .|.. -...+.|+. +.++.+.+.+|.|+.+|+.+++.+..+ - ..... .+++ +++.|..... .+
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~--~g~~Ly~ltw--~~ 115 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLAS--DGERLYQLTW--TE 115 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEE--CSSCEEEEES--SS
T ss_pred EEEEEE-cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEE--eCCEEEEEEc--cC
Confidence 344555 3443 347888884 567778888899999999999988877 2 23333 3555 4444444432 18
Q ss_pred CeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC----CCEEEEEEcCCC
Q psy519 158 KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH----EPVTSLVWSVTG 233 (351)
Q Consensus 158 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~ 233 (351)
+.+.+||..+.+.+.++.... .-..++ +|++.|+.+..++.|.++|..+.+.+..+..... ..++.+.|. +|
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG 191 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG 191 (268)
T ss_dssp CEEEEEETTTTEEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECCcCcEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC
Confidence 999999999999999886532 223444 5688888888889999999999999988865433 245778887 77
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeee
Q psy519 234 ETLVTGSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 234 ~~l~~~~~dg~i~i~~~~~~~~~~~ 258 (351)
++.+..-.++.|.+.|..+++.+..
T Consensus 192 ~lyanvw~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 192 VIYANIWHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp EEEEEETTCSEEEEECTTTCBEEEE
T ss_pred EEEEEECCCCeEEEEeCCCCcEEEE
Confidence 6555555688999999999998875
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=1.7e-08 Score=94.02 Aligned_cols=243 Identities=12% Similarity=0.058 Sum_probs=157.2
Q ss_pred ccEEEEecCCCceEEEecCCc-------cCCC--ccceEE-EEECCCCcEEEEeC------CCcEEEEeCCCCeeeEEee
Q psy519 25 EDVLANLESQKNLQSRYLPYY-------TSGH--DMTVWS-VEACSKGLALTGSR------DTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-------~~~~--~~~i~~-~~~~~~~~~~~~~~------d~~i~vw~~~~~~~~~~~~ 88 (351)
+..+++++.++.+..+|..++ .... ...+.+ ... .++.++.+.. ++.|+.+|.++++.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 556777788899999998766 1000 011110 011 1455554432 5899999999999988775
Q ss_pred CCC---C----------------------------CeEEEEEeCCCCEEEEEeCCC-------------------cEEEE
Q psy519 89 GHK---Q----------------------------DVTCARFHPKITYIGTGSYDK-------------------AVRLW 118 (351)
Q Consensus 89 ~~~---~----------------------------~i~~i~~~~~~~~l~~~~~dg-------------------~i~i~ 118 (351)
... . .-..+++.|+...++.++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 310 0 012367888888888887765 39999
Q ss_pred eCCCCceeEEecc--CC-------CCeEEEEEccCCC---EEEEEecCCCCCeEEEEEccCCceeEEeccCC--------
Q psy519 119 SITDGASVRVFSD--HV-------SPVLSIAFSPCGK---YLASGGTGSYDKAVRLWSITDGASVRVFSDHV-------- 178 (351)
Q Consensus 119 d~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~---~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~-------- 178 (351)
|.++++.+..++. |. .+.....+..+|+ .++.++. +|.++++|.++|+.+...+...
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~---~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPK---NGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCT---TSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECC---CCEEEEEECCCCCEeccccccccccccccc
Confidence 9999998877753 21 2333333334665 5777777 9999999999998874432111
Q ss_pred ----CCE------------------------EEEEECCCCcEEEEEc---------------------------------
Q psy519 179 ----SPV------------------------LSIAFSPCGKYLASGG--------------------------------- 197 (351)
Q Consensus 179 ----~~i------------------------~~~~~~~~~~~l~~~~--------------------------------- 197 (351)
.++ ..++++|+..++++..
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 000 1257777766655421
Q ss_pred ---CCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeecc------eeEEec
Q psy519 198 ---EDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGVYP------RCAAQP 268 (351)
Q Consensus 198 ---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~------~~~~s~ 268 (351)
.+|.|..||+.+++.+-++... .+.....+...+.++++++.||.++.||.++++.+...... .+.+..
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~ 510 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL 510 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CCCccceEEEEeCCCCcEEEEccCC--CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEE
Confidence 2378999999999987766532 23333444556888999999999999999999988664332 244456
Q ss_pred CCcee
Q psy519 269 VGFEA 273 (351)
Q Consensus 269 ~~~~~ 273 (351)
+|+..
T Consensus 511 ~G~~y 515 (668)
T 1kv9_A 511 AGRQY 515 (668)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 66643
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.09 E-value=4.8e-08 Score=89.25 Aligned_cols=229 Identities=14% Similarity=0.069 Sum_probs=147.8
Q ss_pred ccEEEEecCCCceEEEecCCc-------cCCCcc--ceEE-EEECCCCcEEEEeC------CCcEEEEeCCCCeeeEEee
Q psy519 25 EDVLANLESQKNLQSRYLPYY-------TSGHDM--TVWS-VEACSKGLALTGSR------DTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-------~~~~~~--~i~~-~~~~~~~~~~~~~~------d~~i~vw~~~~~~~~~~~~ 88 (351)
+..+++++.++.+..+|..++ ...+.. .+.+ ... .++.++.++. ++.|..+|.++++.+..+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 456777778888988888766 111110 1111 011 1566655554 7899999999999887765
Q ss_pred CCCCC-------------------------------------e-EEEEEeCCCCEEEEEeCC----------------Cc
Q psy519 89 GHKQD-------------------------------------V-TCARFHPKITYIGTGSYD----------------KA 114 (351)
Q Consensus 89 ~~~~~-------------------------------------i-~~i~~~~~~~~l~~~~~d----------------g~ 114 (351)
..... + ..+++.++...++.+..+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32110 0 135667766677666532 35
Q ss_pred EEEEeCCCCceeEEeccC----------CCCeEEEEEccCCC---EEEEEecCCCCCeEEEEEccCCceeEEeccCC---
Q psy519 115 VRLWSITDGASVRVFSDH----------VSPVLSIAFSPCGK---YLASGGTGSYDKAVRLWSITDGASVRVFSDHV--- 178 (351)
Q Consensus 115 i~i~d~~~~~~~~~~~~~----------~~~i~~~~~~~~~~---~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~--- 178 (351)
|..+|.++++.+..++.. ..++. +...++|+ .++.++. +|.++++|.++++.+...+...
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~---~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDR---NGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECT---TSEEEEEETTTCCEEEEEESSTTCC
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCC---CcEEEEEECCCCCEEeeecccCCcc
Confidence 999999999988776532 12222 23334674 5667777 9999999999998877654221
Q ss_pred ----------CCE--------------------------EEEEECCCCcEEEEEc-------------------------
Q psy519 179 ----------SPV--------------------------LSIAFSPCGKYLASGG------------------------- 197 (351)
Q Consensus 179 ----------~~i--------------------------~~~~~~~~~~~l~~~~------------------------- 197 (351)
.++ ..++++|+..++++.+
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 111 2357788777776653
Q ss_pred ------------CCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee
Q psy519 198 ------------EDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGV 260 (351)
Q Consensus 198 ------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 260 (351)
.+|.+..||+.+++.+-++.... .+....+...+..++.++.||.|+.+|.++++.+-...
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF--AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCCC--CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 34789999999999887765332 22222233356778889999999999999999886543
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.06 E-value=8.1e-08 Score=87.82 Aligned_cols=242 Identities=14% Similarity=0.032 Sum_probs=151.8
Q ss_pred EEEecCCCceEEEecCCc-------cCCCc--cceEE-EEECCCCcEEEEe------CCCcEEEEeCCCCeeeEEeeCCC
Q psy519 28 LANLESQKNLQSRYLPYY-------TSGHD--MTVWS-VEACSKGLALTGS------RDTTARLWSLEQMYPLRIFVGHK 91 (351)
Q Consensus 28 l~~~~~~~~i~i~~~~~~-------~~~~~--~~i~~-~~~~~~~~~~~~~------~d~~i~vw~~~~~~~~~~~~~~~ 91 (351)
|++++.++.+.-+|..++ ...+. ..+.+ ... .++.+++++ .++.|+.+|.++++.+..+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 777778888888888766 11110 01111 011 145665554 37999999999999887765322
Q ss_pred CC-------------------------------------e-EEEEEeCCCCEEEEEeCC----------------CcEEE
Q psy519 92 QD-------------------------------------V-TCARFHPKITYIGTGSYD----------------KAVRL 117 (351)
Q Consensus 92 ~~-------------------------------------i-~~i~~~~~~~~l~~~~~d----------------g~i~i 117 (351)
.. + ..+++.++...++.+..+ +.|.-
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 11 0 134566777777777655 37999
Q ss_pred EeCCCCceeEEeccCC----------CCeEEEEEc-cCC---CEEEEEecCCCCCeEEEEEccCCceeEEeccCC-----
Q psy519 118 WSITDGASVRVFSDHV----------SPVLSIAFS-PCG---KYLASGGTGSYDKAVRLWSITDGASVRVFSDHV----- 178 (351)
Q Consensus 118 ~d~~~~~~~~~~~~~~----------~~i~~~~~~-~~~---~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~----- 178 (351)
+|.++++.+..++... .++. +... .+| ..++.++. +|.++++|.++++.+.......
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~---~G~l~~lD~~tG~~lw~~~~~~~~~~~ 358 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDR---NGIVYTLDRTDGALVSANKLDDTVNVF 358 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECT---TSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECC---CcEEEEEECCCCCEeecccccCCcccc
Confidence 9999999887765322 1222 2222 467 45666777 9999999999998876654211
Q ss_pred --------CCE--------------------------EEEEECCCCcEEEEEc---------------------------
Q psy519 179 --------SPV--------------------------LSIAFSPCGKYLASGG--------------------------- 197 (351)
Q Consensus 179 --------~~i--------------------------~~~~~~~~~~~l~~~~--------------------------- 197 (351)
.++ ..++++|+..++++..
T Consensus 359 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence 111 1356667665554421
Q ss_pred ------------CCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeec----
Q psy519 198 ------------EDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGIGVY---- 261 (351)
Q Consensus 198 ------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~---- 261 (351)
..|.+..||+.+++.+-+..... +...-.....+.+++.++.||.++.||.++++.+-....
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~ 516 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGA 516 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred ccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC--CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCc
Confidence 34789999999998876664322 111111223567788899999999999999998865433
Q ss_pred --ceeEEecCCceeeee
Q psy519 262 --PRCAAQPVGFEAATL 276 (351)
Q Consensus 262 --~~~~~s~~~~~~~~~ 276 (351)
..+.+..+|+..+..
T Consensus 517 ~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 517 IGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp CSCCEEEEETTEEEEEE
T ss_pred EeccEEEEeCCEEEEEE
Confidence 235556677644333
No 253
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.06 E-value=7.3e-07 Score=71.96 Aligned_cols=198 Identities=11% Similarity=0.097 Sum_probs=135.4
Q ss_pred CCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCCCeeeEEeeC-CCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy519 47 SGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQMYPLRIFVG-HKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG 123 (351)
Q Consensus 47 ~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~ 123 (351)
.+-...+..++|+|++ .+ ++...++.|...|.. ++.++.+.- .....-.+++.+++.++++.-.++.+.++++...
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 3445679999999875 45 667788999999998 777777642 2356788999988877676666788999987654
Q ss_pred ce---eEEec------cCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC---CceeEEec-------cCCCCEEEE
Q psy519 124 AS---VRVFS------DHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD---GASVRVFS-------DHVSPVLSI 184 (351)
Q Consensus 124 ~~---~~~~~------~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~---~~~~~~~~-------~~~~~i~~~ 184 (351)
.. +.... ........++|+|+++.|+++.. .....+|.++. ...+.... .+...+..+
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E---~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKE---KNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEE---SSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEEC---cCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 42 12221 12345689999999988888776 44455555531 11122221 123456899
Q ss_pred EECC-CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC--------CCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy519 185 AFSP-CGKYLASGGEDGLVLTHELTTGRVISRFHLQEH--------EPVTSLVWSVTGETLVTGSLTGTVQFYGW 250 (351)
Q Consensus 185 ~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~dg~i~i~~~ 250 (351)
+++| .+++++....+..+.++|.. ++.+..+.+... .....++|.++|++. ..++.+.++.|.-
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ly-IvsE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIY-IVSEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEE-EEETTTEEEEEEC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEE-EEcCCceEEEEEe
Confidence 9999 45566677778889999975 667766665532 378999999999844 4477777777754
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.05 E-value=6.9e-06 Score=78.42 Aligned_cols=249 Identities=7% Similarity=-0.069 Sum_probs=165.9
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc----cC-------CCccceEEEEECCCCcEEEEeCCCcEEEEeCC
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TS-------GHDMTVWSVEACSKGLALTGSRDTTARLWSLE 79 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~-------~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~ 79 (351)
...|.++...++ |.+. .|+.++-|..++.... .. -....|.++...++|.+-.|..++-|..|+..
T Consensus 309 ~~~i~~i~~D~~--g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~ 385 (795)
T 4a2l_A 309 QRSVRSIFMDSQ--GGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPI 385 (795)
T ss_dssp SSCEEEEEECTT--SCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTT
T ss_pred CCcEEEEEEeCC--cCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCC
Confidence 357899999888 7744 4556666888876543 10 12456999999999999778888889999988
Q ss_pred CCeeeEEeeC--------CCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEec----cCCCCeEEEEEccCCCE
Q psy519 80 QMYPLRIFVG--------HKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFS----DHVSPVLSIAFSPCGKY 147 (351)
Q Consensus 80 ~~~~~~~~~~--------~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~ 147 (351)
+++....... ....|.++...++++.|..|+.++-+..+|..+++...... .....|.++...++|++
T Consensus 386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l 465 (795)
T 4a2l_A 386 TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNL 465 (795)
T ss_dssp TCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCE
T ss_pred CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCE
Confidence 7654432211 23578999998888857777877789999988776443321 13457899999888876
Q ss_pred EEEEecCCCCCeEEEEEccCCceeEEec------cCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeec---
Q psy519 148 LASGGTGSYDKAVRLWSITDGASVRVFS------DHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHL--- 218 (351)
Q Consensus 148 l~~~~~~~~d~~i~i~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--- 218 (351)
.+.. .+.+..||..+++...... .....|.++...++|.+.+... . -+..||..+++. .+..
T Consensus 466 wigt-----~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~ 536 (795)
T 4a2l_A 466 WLGT-----LSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILP 536 (795)
T ss_dssp EEEE-----SSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSC
T ss_pred EEEe-----cCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCC
Confidence 5543 3458899987664332211 1235789999998888666554 4 488899877655 3321
Q ss_pred ---cCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee--------eecceeEEecCCcee
Q psy519 219 ---QEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI--------GVYPRCAAQPVGFEA 273 (351)
Q Consensus 219 ---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--------~~~~~~~~s~~~~~~ 273 (351)
.....|.++..+++|.+.++.. . -+..||..+++.... ..+.++...++|...
T Consensus 537 ~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW 600 (795)
T 4a2l_A 537 VSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLW 600 (795)
T ss_dssp SCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEE
T ss_pred CCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEE
Confidence 1124689999999998665543 3 578888776654432 123345555566543
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.04 E-value=2.8e-07 Score=73.35 Aligned_cols=169 Identities=10% Similarity=0.046 Sum_probs=118.4
Q ss_pred eeeEEeeCCC--CCeEEEEEeCCCCEEEEEeCC--CcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC
Q psy519 82 YPLRIFVGHK--QDVTCARFHPKITYIGTGSYD--KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 82 ~~~~~~~~~~--~~i~~i~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d 157 (351)
+.+..+ .|. .-...+.|++ +.++.+.+.+ ..|+.+|+.+++.+....-.. ........+.++.|..... .+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw--~~ 84 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTW--RN 84 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEES--SS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEe--eC
Confidence 345555 454 3467899986 5566666665 489999999999988775332 2222323334555554432 18
Q ss_pred CeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCC----CCEEEEEEcCCC
Q psy519 158 KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEH----EPVTSLVWSVTG 233 (351)
Q Consensus 158 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~ 233 (351)
+.+.+||.++.+.+.++...... ..++ ++++.|+.+..++.|.++|..+.+.+..+..... ..++.+.|. +|
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G 160 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG 160 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence 99999999999999988654322 3454 4677777777789999999999999888876432 356677776 66
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeee
Q psy519 234 ETLVTGSLTGTVQFYGWPSASKIGIG 259 (351)
Q Consensus 234 ~~l~~~~~dg~i~i~~~~~~~~~~~~ 259 (351)
+..+..-.+..|.+.|..+++.+...
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEE
Confidence 65555556789999999999988763
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.01 E-value=1.7e-07 Score=87.30 Aligned_cols=264 Identities=13% Similarity=0.032 Sum_probs=164.2
Q ss_pred ccEEEEecCCCceEEEecCCc-----cCCCc----------cce-EEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEee
Q psy519 25 EDVLANLESQKNLQSRYLPYY-----TSGHD----------MTV-WSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-----~~~~~----------~~i-~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 88 (351)
+..|++++.++.|.-+|..++ ..... ..+ ..++. .+++++.++.|+.|..+|.++|+.+..+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL-WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE-ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 445666666777877777665 10000 000 11222 24566788889999999999999988775
Q ss_pred CCC----CCeEE-EEEeCCCCEEEEEeC------CCcEEEEeCCCCceeEEeccCC---C--------------------
Q psy519 89 GHK----QDVTC-ARFHPKITYIGTGSY------DKAVRLWSITDGASVRVFSDHV---S-------------------- 134 (351)
Q Consensus 89 ~~~----~~i~~-i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~---~-------------------- 134 (351)
... ..+.+ .... ++ .++++.. +|.|+.+|.++|+.+..+.... .
T Consensus 145 ~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 145 TTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp CSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred cCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 421 11111 1111 33 4555433 5899999999999887764210 0
Q ss_pred --------CeEEEEEccCCCEEEEEecCCCCC-------------------eEEEEEccCCceeEEecc--CC-------
Q psy519 135 --------PVLSIAFSPCGKYLASGGTGSYDK-------------------AVRLWSITDGASVRVFSD--HV------- 178 (351)
Q Consensus 135 --------~i~~~~~~~~~~~l~~~~~~~~d~-------------------~i~i~d~~~~~~~~~~~~--~~------- 178 (351)
....++++|+...++.+.. ++ .|..+|.++++.+-.++. |.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~---~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTG---NGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTAT 299 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECC---CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCC---CCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCC
Confidence 1124688888888888765 54 499999999998877754 21
Q ss_pred CCEEEEEECCCCc---EEEEEcCCCeEEEEEcCCCcEEEEeeccCC-----------CC---------------------
Q psy519 179 SPVLSIAFSPCGK---YLASGGEDGLVLTHELTTGRVISRFHLQEH-----------EP--------------------- 223 (351)
Q Consensus 179 ~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------~~--------------------- 223 (351)
.+.....+..+|+ .++.++.+|.++++|..+|+.+........ .+
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G 379 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFG 379 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTC
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcc
Confidence 2333333334665 688899999999999999998854432210 00
Q ss_pred ---EEEEEEcCCCCEEEEEe------------------------------------CCCeEEEEeCCCCceeeeee----
Q psy519 224 ---VTSLVWSVTGETLVTGS------------------------------------LTGTVQFYGWPSASKIGIGV---- 260 (351)
Q Consensus 224 ---v~~~~~~~~~~~l~~~~------------------------------------~dg~i~i~~~~~~~~~~~~~---- 260 (351)
-..++++|+..++++.. .+|.|..||+.+++.+-...
T Consensus 380 ~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~ 459 (668)
T 1kv9_A 380 AHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH 459 (668)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS
T ss_pred ccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC
Confidence 01267788776665421 24889999999998764322
Q ss_pred cceeEEecCCceeeeeeccceeeEEEeeeceeCceEE
Q psy519 261 YPRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVV 297 (351)
Q Consensus 261 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 297 (351)
.....+...+..+.++..++ .++.++..+|+...
T Consensus 460 ~~~~~~~t~gg~vf~g~~dg---~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 460 WNGGTLSTAGNLVFQGTAAG---QMHAYSADKGEALW 493 (668)
T ss_dssp CCCCEEEETTTEEEEECTTS---EEEEEETTTCCEEE
T ss_pred CcCceeEeCCCEEEEECCcc---cchhhhhhcChhhe
Confidence 22345556677777766555 55666666666543
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.00 E-value=2.2e-06 Score=72.50 Aligned_cols=200 Identities=6% Similarity=-0.069 Sum_probs=126.1
Q ss_pred ceEEEEECCCCc-EEEEeCCCcEEEEeCCCCeeeEEeeC--------------------CCCCeEEEEEeC-CCCEEEEE
Q psy519 52 TVWSVEACSKGL-ALTGSRDTTARLWSLEQMYPLRIFVG--------------------HKQDVTCARFHP-KITYIGTG 109 (351)
Q Consensus 52 ~i~~~~~~~~~~-~~~~~~d~~i~vw~~~~~~~~~~~~~--------------------~~~~i~~i~~~~-~~~~l~~~ 109 (351)
...+++|.+++. +.++..++.|..|+..+++.. .+.. ....+.++++.+ +++ |+++
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 345688999998 588888999999998765433 2210 013578899998 555 5555
Q ss_pred eCCCcEEEEeCCCCceeEEec---c-CCCCeEEEEEcc-CCCEEEEEecC--------------CCCCeEEEEEccCCce
Q psy519 110 SYDKAVRLWSITDGASVRVFS---D-HVSPVLSIAFSP-CGKYLASGGTG--------------SYDKAVRLWSITDGAS 170 (351)
Q Consensus 110 ~~dg~i~i~d~~~~~~~~~~~---~-~~~~i~~~~~~~-~~~~l~~~~~~--------------~~d~~i~i~d~~~~~~ 170 (351)
...+.+..+|..+++...... + .......+++.+ +|++.++-... ..++.|..||..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 445568889977554222111 1 123468899999 88776654220 1136789999876654
Q ss_pred eEEeccCCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcCCCc--EEEEeeccCCCCEEEEEEcCCCCEEEEEeC------
Q psy519 171 VRVFSDHVSPVLSIAFSPCGKYLASG-GEDGLVLTHELTTGR--VISRFHLQEHEPVTSLVWSVTGETLVTGSL------ 241 (351)
Q Consensus 171 ~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------ 241 (351)
...... ......++++|++++|+++ +.++.|..|++.... ....+. .... ...++++++|++.++...
T Consensus 178 ~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 178 TLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp EEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-EEEEEECTTSCEEEEEEEETTSST
T ss_pred EEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-CCCeEECCCCCEEEEecCcccccc
Confidence 332222 1234579999999866655 566899999987421 112221 1223 788999999987666544
Q ss_pred ----CCeEEEEeCCCCceee
Q psy519 242 ----TGTVQFYGWPSASKIG 257 (351)
Q Consensus 242 ----dg~i~i~~~~~~~~~~ 257 (351)
.+.|..+|.. ++.+.
T Consensus 255 ~~~~~~~v~~~d~~-G~~~~ 273 (322)
T 2fp8_A 255 HGRVDPKGIKFDEF-GNILE 273 (322)
T ss_dssp TSCEEEEEEEECTT-SCEEE
T ss_pred cCCCccEEEEECCC-CCEEE
Confidence 4678888864 55443
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.98 E-value=6.1e-06 Score=70.56 Aligned_cols=235 Identities=8% Similarity=-0.047 Sum_probs=145.0
Q ss_pred EEeeecCCccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCeeeEEee
Q psy519 15 IQNSFKPETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 15 ~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~~~~~~~ 88 (351)
.|.+..++ .. |+.+ ....|+..++... .......+..++|.+. +.+ .+-...+.|..+++........+.
T Consensus 37 ~C~~~~~~--~~-ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 37 SCKALGPE--PV-LLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp CEEESSSC--CE-EEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred cccccccC--ce-eEee-cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 34444444 33 3333 2345777777654 1122344688999865 455 555667889999988765444333
Q ss_pred CCCCCeEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC-CeEEEEEcc
Q psy519 89 GHKQDVTCARFHPKI-TYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD-KAVRLWSIT 166 (351)
Q Consensus 89 ~~~~~i~~i~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d-~~i~i~d~~ 166 (351)
........+++.+.+ +++++-...+.|.+.++........+.........++++|.+..|+.+..+ . +.|..+++.
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~--~~~~I~r~~~d 190 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG--NTPRIEASSMD 190 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECS--SSCEEEEEETT
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccC--CCCEEEEEeCC
Confidence 333455789998754 455555567889999987544333333344567899999977776666542 3 789999876
Q ss_pred CCceeEEeccCCCCEEEEEECCCCcEEEE-EcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeE
Q psy519 167 DGASVRVFSDHVSPVLSIAFSPCGKYLAS-GGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTV 245 (351)
Q Consensus 167 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 245 (351)
...........-.....++++|++..|+. -...+.|..+|+..... ..+..........+++. .+.+.++-...+.|
T Consensus 191 G~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~~~~~P~giav~-~~~ly~td~~~~~V 268 (349)
T 3v64_C 191 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQGLPHPFAITVF-EDSLYWTDWHTKSI 268 (349)
T ss_dssp SCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeCCCCCceEEEEE-CCEEEEecCCCCeE
Confidence 43322222223445789999986665554 45567899999864332 22222233567888883 44555555567889
Q ss_pred EEEeCCCCceee
Q psy519 246 QFYGWPSASKIG 257 (351)
Q Consensus 246 ~i~~~~~~~~~~ 257 (351)
..++..+++...
T Consensus 269 ~~~~~~~G~~~~ 280 (349)
T 3v64_C 269 NSANKFTGKNQE 280 (349)
T ss_dssp EEEETTTCCSCE
T ss_pred EEEEccCCCccE
Confidence 888866665443
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.98 E-value=1.6e-05 Score=75.91 Aligned_cols=232 Identities=9% Similarity=-0.002 Sum_probs=157.8
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc----c--------CCCccceEEEEECCCCcEEEEeCCCcEEEEeC
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----T--------SGHDMTVWSVEACSKGLALTGSRDTTARLWSL 78 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~--------~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~ 78 (351)
...|.++...++ |.+.+.. .+ -|.+|+.... . .-....|.++...++|.+-.|+.++-|..++.
T Consensus 262 ~~~i~~i~~d~~--g~lWigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~ 337 (795)
T 4a2l_A 262 SNYIRSLAMDSQ--NRLWIGT-FN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHP 337 (795)
T ss_dssp CSBEEEEEECTT--SCEEEEE-SS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECG
T ss_pred CCeEEEEEEcCC--CCEEEEe-CC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCC
Confidence 356899999888 7765544 44 4788887654 1 11246799999999999988888888999987
Q ss_pred CCCeeeEEee------CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEecc--------CCCCeEEEEEccC
Q psy519 79 EQMYPLRIFV------GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSD--------HVSPVLSIAFSPC 144 (351)
Q Consensus 79 ~~~~~~~~~~------~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------~~~~i~~~~~~~~ 144 (351)
.+.+...... -....|.++...++++ |..|+.++-|..||..+++....... ....|.+++..++
T Consensus 338 ~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 338 IRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT
T ss_pred CcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 6554322111 1235689998888776 55577777799999877654332211 2367899999888
Q ss_pred CCEEEEEecCCCCCeEEEEEccCCceeEEec----cCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc-
Q psy519 145 GKYLASGGTGSYDKAVRLWSITDGASVRVFS----DHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ- 219 (351)
Q Consensus 145 ~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~- 219 (351)
++.|..|+. ++.|..||.++++...... .....|.++...++|.+.+.. .+| +..||..+++... +...
T Consensus 417 g~~lWigt~---~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~~~~~~~~-~~~~~ 490 (795)
T 4a2l_A 417 KSLVYIGTH---AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNPEQRSFTT-IEKEK 490 (795)
T ss_dssp TTEEEEEET---TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEETTTTEEEE-CCBCT
T ss_pred CCEEEEEeC---cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeCCCCeEEE-ccccc
Confidence 885666666 6789999988776433221 134578999988888765554 444 8889987765432 2211
Q ss_pred -----CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy519 220 -----EHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 220 -----~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 255 (351)
....|.++...++|.+.+... +-+..|+..+++.
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred cccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 125689999999988666554 4588888766554
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.97 E-value=9.9e-07 Score=74.04 Aligned_cols=220 Identities=12% Similarity=0.053 Sum_probs=135.4
Q ss_pred cceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC--CcEEEEeCCCCceeE
Q psy519 51 MTVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYD--KAVRLWSITDGASVR 127 (351)
Q Consensus 51 ~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~ 127 (351)
.....++|++++.+ ++-..++.|..||.... ....+. .......+++.++++++++.... ..|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45678999999988 55557899999998754 333332 23468899999999866655432 247777877776543
Q ss_pred Eecc-CCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCce-eEEec---------cCCCCEEEEEECCCCcEEEEE
Q psy519 128 VFSD-HVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGAS-VRVFS---------DHVSPVLSIAFSPCGKYLASG 196 (351)
Q Consensus 128 ~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~-~~~~~---------~~~~~i~~~~~~~~~~~l~~~ 196 (351)
.... .......++..+++..+++-.. ++.|+.+|...++. +.... ..-.....+ +|+++.|+.+
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~---~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSY---RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETT---TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEeCCCccccCcccccCCCcEEEEECC---CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 3221 2233455665655544444334 78899999765421 21110 111234555 7788766554
Q ss_pred -cCCCeEEEEEcCC-CcE--EEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-------eecceeE
Q psy519 197 -GEDGLVLTHELTT-GRV--ISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI-------GVYPRCA 265 (351)
Q Consensus 197 -~~dg~i~i~d~~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------~~~~~~~ 265 (351)
...+.|..|++.. ++. ...+. .......++++++|++.++....+.|.+++.. ++.... .....++
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~--~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFV--EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEE--ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEe--ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 5578899999864 321 11111 11346779999999987777778899999975 544221 2234577
Q ss_pred Ee---cCCceeeeeeccc
Q psy519 266 AQ---PVGFEAATLAANS 280 (351)
Q Consensus 266 ~s---~~~~~~~~~~~~~ 280 (351)
|. |++..+.+....+
T Consensus 262 ~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ECCSTTTTTEEEEEECTT
T ss_pred EecccCCCCEEEEECCCC
Confidence 77 7777665555443
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.95 E-value=6.3e-08 Score=90.29 Aligned_cols=261 Identities=14% Similarity=0.046 Sum_probs=151.5
Q ss_pred EeeecC-CccccEEEEecCCC-----------ceEEEecCCc--------cCCCccceEEEEECCCCcE-EEEeC-CCcE
Q psy519 16 QNSFKP-ETVEDVLANLESQK-----------NLQSRYLPYY--------TSGHDMTVWSVEACSKGLA-LTGSR-DTTA 73 (351)
Q Consensus 16 ~~~~sp-~~~~~~l~~~~~~~-----------~i~i~~~~~~--------~~~~~~~i~~~~~~~~~~~-~~~~~-d~~i 73 (351)
++++.| + +++++.|+.+. .+.+||..+. ...+.....++++..++++ +.|+. +..+
T Consensus 190 ~~av~~~~--g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTS--GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTT--TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecC--CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 556677 7 88888886542 5788988776 1112333445677788888 77774 5689
Q ss_pred EEEeCCCCeeeEEeeCCCC-CeEEEEEeCCCCEEEEEe-CC-----CcEEEEeCCCCceeEEe----ccCCCCeEEEEEc
Q psy519 74 RLWSLEQMYPLRIFVGHKQ-DVTCARFHPKITYIGTGS-YD-----KAVRLWSITDGASVRVF----SDHVSPVLSIAFS 142 (351)
Q Consensus 74 ~vw~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~~----~~~~~~i~~~~~~ 142 (351)
.+||..+.+-...-..+.. .-.+++..++++.++.|+ .+ ..+.+||..+.+....- ......-....+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 9999987654322211111 123455667899999988 34 57999999887644321 0000000001122
Q ss_pred cCCCEEEEEecC------CCCCeEEEEEccCCceeEEeccCC---------CCEEEEEECC-CCcEEEEEcCCC------
Q psy519 143 PCGKYLASGGTG------SYDKAVRLWSITDGASVRVFSDHV---------SPVLSIAFSP-CGKYLASGGEDG------ 200 (351)
Q Consensus 143 ~~~~~l~~~~~~------~~d~~i~i~d~~~~~~~~~~~~~~---------~~i~~~~~~~-~~~~l~~~~~dg------ 200 (351)
.++..++.++.. .....+..||..+..-......+. ..-.++.|.. ++++++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 344555555430 003467889987765333222111 1223444543 778888887532
Q ss_pred -----eEEEEEcCCCcEEEEe--eccCCCCEEEEEEcCCCCEEEEEeCC-----------CeEEEEeCCCCceeeee---
Q psy519 201 -----LVLTHELTTGRVISRF--HLQEHEPVTSLVWSVTGETLVTGSLT-----------GTVQFYGWPSASKIGIG--- 259 (351)
Q Consensus 201 -----~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~i~i~~~~~~~~~~~~--- 259 (351)
.+.+||..+.+..... .......-.+++..|++++++.|+.+ ..+.+||..+.+-....
T Consensus 428 ~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred CCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC
Confidence 6788888776644332 22222223455677899999998754 46899998776543321
Q ss_pred ---ecce-eEEecCCceeeeeec
Q psy519 260 ---VYPR-CAAQPVGFEAATLAA 278 (351)
Q Consensus 260 ---~~~~-~~~s~~~~~~~~~~~ 278 (351)
..++ ..+.|+++.++.++.
T Consensus 508 ~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 508 IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SCCCTTEEEEECTTSCEEEEECC
T ss_pred CccccccHhhcCCCcEEEecCCC
Confidence 1223 345689998887774
No 262
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.94 E-value=2.6e-07 Score=87.47 Aligned_cols=240 Identities=12% Similarity=0.047 Sum_probs=134.9
Q ss_pred ceEEeeec-CCccccEEEEecC-CC----ceEEEecCCc-c--CCC-ccceEEEEECCCCcE-EEEeCC-----CcEEEE
Q psy519 13 HFIQNSFK-PETVEDVLANLES-QK----NLQSRYLPYY-T--SGH-DMTVWSVEACSKGLA-LTGSRD-----TTARLW 76 (351)
Q Consensus 13 ~v~~~~~s-p~~~~~~l~~~~~-~~----~i~i~~~~~~-~--~~~-~~~i~~~~~~~~~~~-~~~~~d-----~~i~vw 76 (351)
.+...+|| || |++||.+.. +| .|+++++.++ . ..+ ......+.|+|||+. +....+ ..|+++
T Consensus 175 ~~~~~~~S~PD--G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPE--HDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTT--TCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCC--CCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 67789999 99 999886543 22 4999998765 2 111 122336789999965 444433 368888
Q ss_pred eCCCCee--eEEee-CCCCCeEEEEEeCCCCEEEEEeC---CCcEEEEeCCCCc-ee--EEe-ccCCCCeEEEEEccCCC
Q psy519 77 SLEQMYP--LRIFV-GHKQDVTCARFHPKITYIGTGSY---DKAVRLWSITDGA-SV--RVF-SDHVSPVLSIAFSPCGK 146 (351)
Q Consensus 77 ~~~~~~~--~~~~~-~~~~~i~~i~~~~~~~~l~~~~~---dg~i~i~d~~~~~-~~--~~~-~~~~~~i~~~~~~~~~~ 146 (351)
++.+++. ...+. ........+.|+|||++|+..+. ...|+++|+.++. .. ..+ .........+.|+. |.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~ 331 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TS 331 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CC
Confidence 8887642 23333 22234567899999998877653 3468889988752 22 333 33344555666554 55
Q ss_pred EEEEEecC--CCCCeEEEEEccCCceeEE-eccCCC--CEEEEEECCCCcEEEEEcCCCe--EEEEEc-------CCCcE
Q psy519 147 YLASGGTG--SYDKAVRLWSITDGASVRV-FSDHVS--PVLSIAFSPCGKYLASGGEDGL--VLTHEL-------TTGRV 212 (351)
Q Consensus 147 ~l~~~~~~--~~d~~i~i~d~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~l~~~~~dg~--i~i~d~-------~~~~~ 212 (351)
.|+..+.. .....|..+|+.++..... +..+.. .+..+.+. .+.++++...++. +.++++ ..++.
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~ 410 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTG 410 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTTC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCcc
Confidence 55444331 1234788888765322222 222333 34455554 3345556666775 555665 33331
Q ss_pred EEEeeccCCCCEEEEEE----cCCCC-EEEEEeCC---CeEEEEeCCCCcee
Q psy519 213 ISRFHLQEHEPVTSLVW----SVTGE-TLVTGSLT---GTVQFYGWPSASKI 256 (351)
Q Consensus 213 ~~~~~~~~~~~v~~~~~----~~~~~-~l~~~~~d---g~i~i~~~~~~~~~ 256 (351)
...+.+.....+..+.+ ++++. ++++.+.. ..+..+|+.+++..
T Consensus 411 ~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~ 462 (751)
T 2xe4_A 411 LREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRT 462 (751)
T ss_dssp CEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEE
T ss_pred ceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 34443333233344433 34554 44443332 56888888776543
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.93 E-value=7.5e-06 Score=71.03 Aligned_cols=221 Identities=7% Similarity=-0.046 Sum_probs=141.5
Q ss_pred CCceEEEecCCc----cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCC-EE
Q psy519 34 QKNLQSRYLPYY----TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKIT-YI 106 (351)
Q Consensus 34 ~~~i~i~~~~~~----~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l 106 (351)
...|+..++... .......+..++|.+. +.+ ++-...+.|..+++........+.........+++.+.+. ++
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY 174 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 174 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEE
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEE
Confidence 356777777654 2223345778999964 455 5656778899999887654444433334556788987544 44
Q ss_pred EEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC-CeEEEEEccCCceeEEeccCCCCEEEEE
Q psy519 107 GTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD-KAVRLWSITDGASVRVFSDHVSPVLSIA 185 (351)
Q Consensus 107 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 185 (351)
++-...+.|.+.++........+.........++++|.+..|+.+..+ . +.|..+++............-.....++
T Consensus 175 ~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~~~~~~~~PnGla 252 (386)
T 3v65_B 175 WTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG--NTPRIEASSMDGSGRRIIADTHLFWPNGLT 252 (386)
T ss_dssp EEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC--CCCEEEEEeCCCCCcEEEEECCCCCeeeEE
Confidence 555556789998887544333343344667899999987777766542 3 7899999865443333333344578999
Q ss_pred ECCCCcEEE-EEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q psy519 186 FSPCGKYLA-SGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 186 ~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 258 (351)
++|++..|+ +-+..+.|..+|+..... ..+..........+++ ..+.++++-...+.|..++..+++....
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 253 IDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp EEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 998665555 445577899999864333 2232223356788888 3445555656678899998666655443
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.91 E-value=5.7e-06 Score=75.60 Aligned_cols=231 Identities=13% Similarity=0.043 Sum_probs=145.0
Q ss_pred CCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCC----CeE-EEEEeCCCCEEEEEeC------CCcEEEEeCCCCceeEEe
Q psy519 61 KGLALTGSRDTTARLWSLEQMYPLRIFVGHKQ----DVT-CARFHPKITYIGTGSY------DKAVRLWSITDGASVRVF 129 (351)
Q Consensus 61 ~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~----~i~-~i~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~ 129 (351)
+++++.++.|+.+..+|.++++.+..+..... .+. ..... ++ .+++++. ++.|+.+|.++++.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 55667888899999999999998877653220 111 11111 34 5555554 789999999999988766
Q ss_pred ccCCCC--------------------------------------eEEEEEccCCCEEEEEecCC-------------CCC
Q psy519 130 SDHVSP--------------------------------------VLSIAFSPCGKYLASGGTGS-------------YDK 158 (351)
Q Consensus 130 ~~~~~~--------------------------------------i~~~~~~~~~~~l~~~~~~~-------------~d~ 158 (351)
...... ...++++++...++.+.... +.+
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 432110 01356777666776664200 013
Q ss_pred eEEEEEccCCceeEEeccC----------CCCEEEEEECCCCc---EEEEEcCCCeEEEEEcCCCcEEEEeeccCC----
Q psy519 159 AVRLWSITDGASVRVFSDH----------VSPVLSIAFSPCGK---YLASGGEDGLVLTHELTTGRVISRFHLQEH---- 221 (351)
Q Consensus 159 ~i~i~d~~~~~~~~~~~~~----------~~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---- 221 (351)
.|..+|.++++.+-.++.. ..++. +...++|+ .++.++.+|.++++|..+++.+..+.....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 6999999999988776532 12221 22234674 577888999999999999998877654320
Q ss_pred --------CCE--------------------------EEEEEcCCCCEEEEEe---------------------------
Q psy519 222 --------EPV--------------------------TSLVWSVTGETLVTGS--------------------------- 240 (351)
Q Consensus 222 --------~~v--------------------------~~~~~~~~~~~l~~~~--------------------------- 240 (351)
.++ ..++++|+..++++.+
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 2467888877776653
Q ss_pred ----------CCCeEEEEeCCCCceeeeeec----ceeEEecCCceeeeeeccceeeEEEeeeceeCceEE
Q psy519 241 ----------LTGTVQFYGWPSASKIGIGVY----PRCAAQPVGFEAATLAANSRVRTLREMHEIVGPVVV 297 (351)
Q Consensus 241 ----------~dg~i~i~~~~~~~~~~~~~~----~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 297 (351)
.+|.|..||..+++.+-.... ....+...+..+.++..++ .+..++..+|+...
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg---~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDG---YLKALDNKDGKELW 499 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTS---EEEEEETTTCCEEE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCC---eEEEEECCCCCEEE
Confidence 357899999999987644322 2223333455555555555 45566666666443
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.90 E-value=1e-06 Score=83.47 Aligned_cols=245 Identities=10% Similarity=-0.012 Sum_probs=137.5
Q ss_pred CCCcc-ceEEEEEC-CCCcE-E-EEeCCC----cEEEEeCCCC-eeeEE-eeCCCCCeEEEEEeCCCCEEEEEeCC----
Q psy519 47 SGHDM-TVWSVEAC-SKGLA-L-TGSRDT----TARLWSLEQM-YPLRI-FVGHKQDVTCARFHPKITYIGTGSYD---- 112 (351)
Q Consensus 47 ~~~~~-~i~~~~~~-~~~~~-~-~~~~d~----~i~vw~~~~~-~~~~~-~~~~~~~i~~i~~~~~~~~l~~~~~d---- 112 (351)
.+|.. .+....|+ |||++ + +...+| +|+++|+.++ +.+.. +. .....++|+||++.|+....+
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCC
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCC
Confidence 34443 67889999 99986 3 333333 4999999988 63211 11 113468899999888777654
Q ss_pred -CcEEEEeCCCCce--eEEec-cCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc-ee--EEec-cCCCCEEEE
Q psy519 113 -KAVRLWSITDGAS--VRVFS-DHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA-SV--RVFS-DHVSPVLSI 184 (351)
Q Consensus 113 -g~i~i~d~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~-~~--~~~~-~~~~~i~~~ 184 (351)
..|+.+++.++.. ...+. ........+.|+|||++|+..........|.++|+.++. .. ..+. ........+
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 3688888877642 22322 223456788999999998877643235679999998762 22 3333 334455666
Q ss_pred EECCCCcEEEEEcCC----CeEEEEEcCCCcEEEE-eeccCCC--CEEEEEEcCCCCEEEEEeCCCe--EEEEeC-----
Q psy519 185 AFSPCGKYLASGGED----GLVLTHELTTGRVISR-FHLQEHE--PVTSLVWSVTGETLVTGSLTGT--VQFYGW----- 250 (351)
Q Consensus 185 ~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~-~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~--i~i~~~----- 250 (351)
.|+.++.+++....+ ..|..+|+.++..... +. .+.. .+..+.+. .+.++++...++. |.++++
T Consensus 326 ~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li-~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~ 403 (751)
T 2xe4_A 326 QMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLV-DHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDG 403 (751)
T ss_dssp EEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEE-CCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTS
T ss_pred eeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEE-CCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccc
Confidence 665444445554443 3677777764221111 11 2222 34556654 2344556666775 556664
Q ss_pred --CCCc-eeee---eecceeEE------ecCCcee-eeeeccceeeEEEeeeceeCceE
Q psy519 251 --PSAS-KIGI---GVYPRCAA------QPVGFEA-ATLAANSRVRTLREMHEIVGPVV 296 (351)
Q Consensus 251 --~~~~-~~~~---~~~~~~~~------s~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~ 296 (351)
.+++ .... .......+ ++++..+ ....+...-..+..++..+|+..
T Consensus 404 ~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~ 462 (751)
T 2xe4_A 404 VFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRT 462 (751)
T ss_dssp CCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEE
T ss_pred cccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 3433 2221 11112333 3455543 33444444455666666666543
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.90 E-value=6.8e-07 Score=81.79 Aligned_cols=248 Identities=14% Similarity=0.066 Sum_probs=151.4
Q ss_pred ccEEEEecCCCceEEEecCCc-------cCCCcc--ceE-EEEECC---CC--cEEEEe------CCCcEEEEeCCCCee
Q psy519 25 EDVLANLESQKNLQSRYLPYY-------TSGHDM--TVW-SVEACS---KG--LALTGS------RDTTARLWSLEQMYP 83 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-------~~~~~~--~i~-~~~~~~---~~--~~~~~~------~d~~i~vw~~~~~~~ 83 (351)
+..++.++.++.+.-+|..++ ...+.. .+. ...... +| .+++++ .++.|+-+|.++++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 456677777888888888766 111110 111 001111 23 334444 378999999999998
Q ss_pred eEEeeCCCCCe-----------------------------------------EEEEEeCCCCEEEEEeC-----------
Q psy519 84 LRIFVGHKQDV-----------------------------------------TCARFHPKITYIGTGSY----------- 111 (351)
Q Consensus 84 ~~~~~~~~~~i-----------------------------------------~~i~~~~~~~~l~~~~~----------- 111 (351)
+.........+ ..+++.|+..+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 77654221000 12456676677776653
Q ss_pred ---------C----CcEEEEeCCCCceeEEecc--CC--------CCeEEEEEc-cCCC---EEEEEecCCCCCeEEEEE
Q psy519 112 ---------D----KAVRLWSITDGASVRVFSD--HV--------SPVLSIAFS-PCGK---YLASGGTGSYDKAVRLWS 164 (351)
Q Consensus 112 ---------d----g~i~i~d~~~~~~~~~~~~--~~--------~~i~~~~~~-~~~~---~l~~~~~~~~d~~i~i~d 164 (351)
| +.|.-+|..+++.+..++. |. .++. +... .+|+ .++.++. +|.++++|
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~---~G~l~~lD 352 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADR---NGFFYVVD 352 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECT---TSEEEEEE
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECC---CceEEEEE
Confidence 2 5899999999998887643 21 1222 2222 4674 6777777 99999999
Q ss_pred ccCCceeEEeccCC-------------CCE--------------------------------EEEEECCCCcEEEEEc--
Q psy519 165 ITDGASVRVFSDHV-------------SPV--------------------------------LSIAFSPCGKYLASGG-- 197 (351)
Q Consensus 165 ~~~~~~~~~~~~~~-------------~~i--------------------------------~~~~~~~~~~~l~~~~-- 197 (351)
.++++.+..+.... .++ ..++++|+..++++..
T Consensus 353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 99998876654321 000 1245666555554432
Q ss_pred -------------------------------CCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEE
Q psy519 198 -------------------------------EDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQ 246 (351)
Q Consensus 198 -------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 246 (351)
.+|.|..||+.+++.+-+..... +...-.....+.+++.++.||.++
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEEECCCCcEE
Confidence 25789999999999876665332 222212222467788899999999
Q ss_pred EEeCCCCceeeeeecc------eeEEecCCceeeeeec
Q psy519 247 FYGWPSASKIGIGVYP------RCAAQPVGFEAATLAA 278 (351)
Q Consensus 247 i~~~~~~~~~~~~~~~------~~~~s~~~~~~~~~~~ 278 (351)
.||.++++.+-..... .+.+..+|+..+...+
T Consensus 511 A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 511 AFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEc
Confidence 9999999988654332 3556677765444333
No 267
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.89 E-value=1.8e-05 Score=68.94 Aligned_cols=230 Identities=9% Similarity=-0.033 Sum_probs=144.9
Q ss_pred cEEEEecCCCceEEEecCCc----cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCC----eeeEEeeCCCCCeE
Q psy519 26 DVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQM----YPLRIFVGHKQDVT 95 (351)
Q Consensus 26 ~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~i~ 95 (351)
.+|+.+ ....|+..++... .......+..++|++. +.+ .+-...+.|+.+++... .....+........
T Consensus 84 ~~ll~~-~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 84 AYLFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp CEEEEE-ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred ceeEEe-ccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 344444 3467888887765 2233456789999975 445 55566788999998752 22333333445678
Q ss_pred EEEEeC-CCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEe
Q psy519 96 CARFHP-KITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVF 174 (351)
Q Consensus 96 ~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~ 174 (351)
.+++.+ .++++++-...+.|.+.++........+.........++++|.+..|+.+..+ ..+.|...++.........
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETTSCSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCCCCccEEEE
Confidence 899998 45555565667899999987655444444444567899999977777766531 1368999998654433333
Q ss_pred ccCCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcCCCcEEEEeecc-CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy519 175 SDHVSPVLSIAFSPCGKYLASG-GEDGLVLTHELTTGRVISRFHLQ-EHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 175 ~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~ 252 (351)
...-.....++++|++..|+.+ ...+.|..+|+............ ......++++. .+.++.+-...+.|..++..+
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCC
Confidence 3334567899999877666655 45678999998644332222211 12456677773 334455555678899999777
Q ss_pred Cceeee
Q psy519 253 ASKIGI 258 (351)
Q Consensus 253 ~~~~~~ 258 (351)
++.+..
T Consensus 321 G~~~~~ 326 (400)
T 3p5b_L 321 GSDVNL 326 (400)
T ss_dssp CCCCEE
T ss_pred CCceEE
Confidence 765543
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.89 E-value=2e-05 Score=66.30 Aligned_cols=225 Identities=9% Similarity=-0.029 Sum_probs=138.5
Q ss_pred EEEecCCCceEEEecCCc----cCCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCC----CeeeEEeeCCCCCeEEE
Q psy519 28 LANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQ----MYPLRIFVGHKQDVTCA 97 (351)
Q Consensus 28 l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~----~~~~~~~~~~~~~i~~i 97 (351)
|+.+. ...|+..++... .......+..++|.+.+ .+ ++-..++.|..+++.. ......+...-.....+
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred EEEEC-CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEE
Confidence 44443 345777787765 11223456789999754 45 6666678999999876 22222232222456789
Q ss_pred EEeCCCC-EEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEe-c
Q psy519 98 RFHPKIT-YIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVF-S 175 (351)
Q Consensus 98 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~-~ 175 (351)
++.+.+. +.++-...+.|.++++........+.........++++|.+..|+.+..+ ..+.|..+++.. .....+ .
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG-~~~~~~~~ 160 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNG-VDIYSLVT 160 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTS-CCEEEEEC
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCC-CCeEEEEE
Confidence 9987544 44555667899999987544333333334567899999977776665541 126888888754 333333 2
Q ss_pred cCCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcCCCcEEEEeecc--CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy519 176 DHVSPVLSIAFSPCGKYLASG-GEDGLVLTHELTTGRVISRFHLQ--EHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 176 ~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~ 252 (351)
..-.....++++|++..|+.+ +..+.|..+|+.... ...+... .......+++. .+.++++-...+.|..++..+
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCC
Confidence 234567899999876665544 456789999986433 2333211 12456788885 355555555678999999877
Q ss_pred Cceee
Q psy519 253 ASKIG 257 (351)
Q Consensus 253 ~~~~~ 257 (351)
++...
T Consensus 239 g~~~~ 243 (316)
T 1ijq_A 239 GSDVN 243 (316)
T ss_dssp CCCCE
T ss_pred CcceE
Confidence 65443
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.89 E-value=5e-06 Score=73.22 Aligned_cols=234 Identities=10% Similarity=0.028 Sum_probs=138.7
Q ss_pred ceEEeeecCC-ccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCcEEEEeCCC-----cEEEEeCCCCe
Q psy519 13 HFIQNSFKPE-TVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGLALTGSRDT-----TARLWSLEQMY 82 (351)
Q Consensus 13 ~v~~~~~sp~-~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~d~-----~i~vw~~~~~~ 82 (351)
....++|+|+ . +..|..+...+.|+.++.... ..........++++++|.++.+...+ .+...+...+.
T Consensus 140 ~P~gvavd~~s~-~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSN-YDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTT-TCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccC-CCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4568899982 1 334444444388999998655 33344568899999999884444321 13333332211
Q ss_pred e-eEEeeCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCceeEEe-cc-CCCCeEEEEEccCCCEEEEEecCCCCC
Q psy519 83 P-LRIFVGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSITDGASVRVF-SD-HVSPVLSIAFSPCGKYLASGGTGSYDK 158 (351)
Q Consensus 83 ~-~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~~~~d~ 158 (351)
. ...+. .......++++| ++.++++-..++.|+.+|..++.....+ .. ....-..++|+|+++.|+.+... .+
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~--~~ 295 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG--KH 295 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT--TT
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC--CC
Confidence 1 01121 223456788999 6666666666788999998877652222 21 12233579999999976666542 67
Q ss_pred eEEEEEccC--Cce--eEEeccC---------------CCCEEEEEE---------CCCCcEEEEEcCCCeEEEEEcCCC
Q psy519 159 AVRLWSITD--GAS--VRVFSDH---------------VSPVLSIAF---------SPCGKYLASGGEDGLVLTHELTTG 210 (351)
Q Consensus 159 ~i~i~d~~~--~~~--~~~~~~~---------------~~~i~~~~~---------~~~~~~l~~~~~dg~i~i~d~~~~ 210 (351)
.|+.+++.. +.. ...+.+. -.....+++ .+++.++++-..++.|+.++. ++
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 899988652 221 1111111 123667899 777777777777888999885 55
Q ss_pred cEEEEeeccC----------------CCCEEEEEEc-CCCCEEEEEeCCCeEEEEeCC
Q psy519 211 RVISRFHLQE----------------HEPVTSLVWS-VTGETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 211 ~~~~~~~~~~----------------~~~v~~~~~~-~~~~~l~~~~~dg~i~i~~~~ 251 (351)
......-... -.....++++ +++.++++-..+++|+.++++
T Consensus 375 ~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 375 RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4332221100 1236788888 566655555556778777654
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=4.6e-06 Score=73.41 Aligned_cols=232 Identities=11% Similarity=0.017 Sum_probs=135.1
Q ss_pred ceEEeeecC-CccccEEEEecCCCceEEEecCCc----cCCCccceEEEEECCCCc-EEEEeC-CC----cEEEEeCCCC
Q psy519 13 HFIQNSFKP-ETVEDVLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSKGL-ALTGSR-DT----TARLWSLEQM 81 (351)
Q Consensus 13 ~v~~~~~sp-~~~~~~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~~-~~~~~~-d~----~i~vw~~~~~ 81 (351)
....++++| + +..|.++...+.|+.+++... +.........++|+++|. ++.+.. ++ .+.+.+.. +
T Consensus 138 ~P~~lavdp~~--~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g 214 (430)
T 3tc9_A 138 GAVWLSFDPKN--HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-S 214 (430)
T ss_dssp CCCEEEEETTE--EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-G
T ss_pred CCCEEEECCCC--CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-C
Confidence 446789998 5 555555555488999998765 223445678999999998 544433 22 23334432 2
Q ss_pred eee--EEeeCCCCCeEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCceeEEecc-CCCCeEEEEEccCCCEEEEEecCCCC
Q psy519 82 YPL--RIFVGHKQDVTCARFHP-KITYIGTGSYDKAVRLWSITDGASVRVFSD-HVSPVLSIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 82 ~~~--~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~d 157 (351)
... ..+.. ......++++| ++.++++-..++.|..++...+........ .......++|+|+|++|+.+... .
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~--~ 291 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN--Q 291 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT--T
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC--C
Confidence 211 22221 23356788999 677666666778999999887654222221 22346789999999966665432 7
Q ss_pred CeEEEEEccCC--ce--eEEeccC---------------CCCEE-EEEEC--------CCCcEEEEEcCCCeEEEEEcCC
Q psy519 158 KAVRLWSITDG--AS--VRVFSDH---------------VSPVL-SIAFS--------PCGKYLASGGEDGLVLTHELTT 209 (351)
Q Consensus 158 ~~i~i~d~~~~--~~--~~~~~~~---------------~~~i~-~~~~~--------~~~~~l~~~~~dg~i~i~d~~~ 209 (351)
+.|..++.... +. +..+.+. -.... .++.. +++.+.++-..++.|+.++. +
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~ 370 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-Q 370 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-T
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-C
Confidence 88999887532 11 1111111 01123 45443 34556666566677888873 4
Q ss_pred CcEEEEeecc-----C-----------CCCEEEEEEcCC-CCEEEEEeCCCeEEEEeCC
Q psy519 210 GRVISRFHLQ-----E-----------HEPVTSLVWSVT-GETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 210 ~~~~~~~~~~-----~-----------~~~v~~~~~~~~-~~~l~~~~~dg~i~i~~~~ 251 (351)
+......... . -.....++++|+ +.++++-..+++|+.++.+
T Consensus 371 G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 371 GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 5433322110 0 124778888884 5555555556777777653
No 271
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.84 E-value=4.5e-06 Score=76.39 Aligned_cols=190 Identities=14% Similarity=0.059 Sum_probs=118.9
Q ss_pred ccEEEEecC-CCceEEEec-CCc-------cCCCc--c-------ceEEEEEC-CCCc----EEEEeCCCcEEEEeCCCC
Q psy519 25 EDVLANLES-QKNLQSRYL-PYY-------TSGHD--M-------TVWSVEAC-SKGL----ALTGSRDTTARLWSLEQM 81 (351)
Q Consensus 25 ~~~l~~~~~-~~~i~i~~~-~~~-------~~~~~--~-------~i~~~~~~-~~~~----~~~~~~d~~i~vw~~~~~ 81 (351)
+..|.+++. ++.|.-+|. .++ ..... . ....+++. .++. ++.++.|+.+.-+|.++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 345555555 677888887 555 11100 0 01224443 2455 778888999999999999
Q ss_pred eeeEEeeCCCC----CeE-EEEEeCCCCEEEEEe------CCCcEEEEeCCCCceeEEeccCCCC---------------
Q psy519 82 YPLRIFVGHKQ----DVT-CARFHPKITYIGTGS------YDKAVRLWSITDGASVRVFSDHVSP--------------- 135 (351)
Q Consensus 82 ~~~~~~~~~~~----~i~-~i~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~--------------- 135 (351)
+.+........ .+. ..... ++ .+++++ .++.|+-+|.++|+.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 98877643220 111 11111 34 455554 3799999999999988766432111
Q ss_pred ----------------------e-EEEEEccCCCEEEEEecCC-------------CCCeEEEEEccCCceeEEeccCC-
Q psy519 136 ----------------------V-LSIAFSPCGKYLASGGTGS-------------YDKAVRLWSITDGASVRVFSDHV- 178 (351)
Q Consensus 136 ----------------------i-~~~~~~~~~~~l~~~~~~~-------------~d~~i~i~d~~~~~~~~~~~~~~- 178 (351)
+ ..+++.++...++.+.... +.+.|..+|.++++.+-.++...
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 0 1356667777777765410 01479999999999887765421
Q ss_pred ---------CCEEEEEEC-CCC---cEEEEEcCCCeEEEEEcCCCcEEEEee
Q psy519 179 ---------SPVLSIAFS-PCG---KYLASGGEDGLVLTHELTTGRVISRFH 217 (351)
Q Consensus 179 ---------~~i~~~~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~ 217 (351)
.++. +... .+| ..++.++.+|.++++|.++++.+-...
T Consensus 300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 1222 2332 467 567788999999999999999887665
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.84 E-value=1.2e-05 Score=68.72 Aligned_cols=200 Identities=9% Similarity=-0.014 Sum_probs=128.6
Q ss_pred ceEEeeecCCccccEEE-EecCCCceEEEecCCc-----cCCCccceEEEEECC-CCcE-EEEeCCCcEEEEeCCCCeee
Q psy519 13 HFIQNSFKPETVEDVLA-NLESQKNLQSRYLPYY-----TSGHDMTVWSVEACS-KGLA-LTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~-~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~~~~~~~ 84 (351)
.+..++|++. +..|. +-...+.|..+++... ..........+++.+ .+.+ ++-...+.|.+.+++.....
T Consensus 74 ~~~~l~~d~~--~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 74 NAIALDFHHR--RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CEEEEEEETT--TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ceEEEEEecc--ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 4578999986 55544 4445678888888765 111223456788876 4455 66667789999998755433
Q ss_pred EEeeCCCCCeEEEEEeCCCCEEEEEe-CC-CcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEE
Q psy519 85 RIFVGHKQDVTCARFHPKITYIGTGS-YD-KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRL 162 (351)
Q Consensus 85 ~~~~~~~~~i~~i~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i 162 (351)
..+...-.....+++.|.+..|+.+. .. +.|..+++..................++++|++..|+.+... .+.|..
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~--~~~I~~ 229 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK--HHVIER 229 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETT--TTEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECC--CCEEEE
Confidence 33333445678999999665555443 44 788888876433322223334557899999988877776542 678999
Q ss_pred EEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee
Q psy519 163 WSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH 217 (351)
Q Consensus 163 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 217 (351)
+|+........+.........+++. ++.++++-...+.|..++..+++....+.
T Consensus 230 ~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 230 ANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 9986544333333334456778873 45566666667888888866676555554
No 273
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=9.2e-05 Score=70.50 Aligned_cols=251 Identities=12% Similarity=-0.018 Sum_probs=162.4
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc----cC----------CCccceEEEEECCCCcEEEEeCCCcEEEE
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----TS----------GHDMTVWSVEACSKGLALTGSRDTTARLW 76 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~~----------~~~~~i~~~~~~~~~~~~~~~~d~~i~vw 76 (351)
...|.++...++ |. |..|+.++-|..++.... .. -....|.++...++|.+..|+.++-|..|
T Consensus 312 ~~~v~~i~~D~~--g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~ 388 (781)
T 3v9f_A 312 NASARYIFQDSF--NN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVF 388 (781)
T ss_dssp SSCEEEEEECSS--CC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEE
T ss_pred CCeEEEEEEeCC--CC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEE
Confidence 456888888888 76 455555666777876644 10 02356999999999999777777779999
Q ss_pred eCCCCeeeEEe---eCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEec--cCCCCeEEEEEccCCCEEEEE
Q psy519 77 SLEQMYPLRIF---VGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFS--DHVSPVLSIAFSPCGKYLASG 151 (351)
Q Consensus 77 ~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~ 151 (351)
+..+++..... ......|.++...+++.+. .|+.++-+..+|..+++...... .....|.++...+++.+.+ +
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-g 466 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-G 466 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-E
T ss_pred ECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-E
Confidence 98765432211 1234578888888777644 56766779999987765433221 1346789999888776544 4
Q ss_pred ecCCCCCeEEEEEccCCceeEEeccC-----CCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC---CCC
Q psy519 152 GTGSYDKAVRLWSITDGASVRVFSDH-----VSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQE---HEP 223 (351)
Q Consensus 152 ~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~ 223 (351)
+ .+.|..||..+++........ ...|.++...++|.+.+.....| +..||..+++. ..+.... ...
T Consensus 467 t----~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~-~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 467 T----HAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV-RKFNQYEGFCSNT 540 (781)
T ss_dssp E----TTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE-EEECTTTTCSCSC
T ss_pred E----CCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE-EEccCCCCCCCCe
Confidence 3 356899998776544332222 35789999998887655443344 77788766543 3332211 246
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee--------eecceeEEecCCcee
Q psy519 224 VTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI--------GVYPRCAAQPVGFEA 273 (351)
Q Consensus 224 v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--------~~~~~~~~s~~~~~~ 273 (351)
|.++...++|.+.++. .+|.+..||..+++.... ..+..+...++|...
T Consensus 541 i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW 597 (781)
T 3v9f_A 541 INQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIW 597 (781)
T ss_dssp EEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEE
T ss_pred eEEEEECCCCCEEEEE-CCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEE
Confidence 8999999888866554 466658888877654332 234455566666543
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=9.4e-06 Score=70.41 Aligned_cols=201 Identities=9% Similarity=-0.018 Sum_probs=130.1
Q ss_pred cceEEeeecCCccccEE-EEecCCCceEEEecCCc-----cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCee
Q psy519 12 KHFIQNSFKPETVEDVL-ANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQMYP 83 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l-~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~~ 83 (351)
..+..++|++. +..| ++-...+.|+.+++... ..........+++.+. +.+ ++-...+.|.+.+++....
T Consensus 116 ~~~~gl~~d~~--~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 116 ENAIALDFHHR--RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp SCEEEEEEETT--TTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CccEEEEEecC--CCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 44678999986 5544 45456678888888754 1112233456777754 455 6666678899988875443
Q ss_pred eEEeeCCCCCeEEEEEeCCCCEEEEEe-CC-CcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEE
Q psy519 84 LRIFVGHKQDVTCARFHPKITYIGTGS-YD-KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVR 161 (351)
Q Consensus 84 ~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~ 161 (351)
...+...-.....+++.|.+..|+.+. .. +.|..+++..................++++|++..|+.+... .+.|.
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~--~~~I~ 271 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK--HHVIE 271 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETT--TTEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECC--CCEEE
Confidence 333333445678999998766665544 33 678888876543333333334557899999988777776542 67899
Q ss_pred EEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee
Q psy519 162 LWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH 217 (351)
Q Consensus 162 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 217 (351)
.+|+........+.........+++. .+.++++-...+.|..++..+++....+.
T Consensus 272 ~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 272 RANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 99986544333343334456788883 45666666677888888876776666654
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.79 E-value=9e-06 Score=74.38 Aligned_cols=234 Identities=11% Similarity=0.058 Sum_probs=144.2
Q ss_pred CCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCC----CeE-E-EEEeC--CCC-EEEEEe------CCCcEEEEeCCCCce
Q psy519 61 KGLALTGSRDTTARLWSLEQMYPLRIFVGHKQ----DVT-C-ARFHP--KIT-YIGTGS------YDKAVRLWSITDGAS 125 (351)
Q Consensus 61 ~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~----~i~-~-i~~~~--~~~-~l~~~~------~dg~i~i~d~~~~~~ 125 (351)
+++++.++.|+.|.-+|.++|+.+..+..... .+. . +.... +++ .+++++ .++.|+-+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 55667888999999999999998877654321 111 1 11111 233 565654 378999999999998
Q ss_pred eEEeccCCCCe-----------------------------------------EEEEEccCCCEEEEEecC----------
Q psy519 126 VRVFSDHVSPV-----------------------------------------LSIAFSPCGKYLASGGTG---------- 154 (351)
Q Consensus 126 ~~~~~~~~~~i-----------------------------------------~~~~~~~~~~~l~~~~~~---------- 154 (351)
+.........+ ..++++|+...++.+...
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 77653211000 135667777777766521
Q ss_pred -----------CCCCeEEEEEccCCceeEEecc--CC--------CCEEEEEEC-CCCc---EEEEEcCCCeEEEEEcCC
Q psy519 155 -----------SYDKAVRLWSITDGASVRVFSD--HV--------SPVLSIAFS-PCGK---YLASGGEDGLVLTHELTT 209 (351)
Q Consensus 155 -----------~~d~~i~i~d~~~~~~~~~~~~--~~--------~~i~~~~~~-~~~~---~l~~~~~dg~i~i~d~~~ 209 (351)
...+.|..+|.++++.+-.++. |. .++. +... .+|+ .++.++.+|.++++|.++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 0126899999999998877643 21 2222 2222 4674 788899999999999999
Q ss_pred CcEEEEeeccCC------------CC--------------------------------EEEEEEcCCCCEEEEEe-----
Q psy519 210 GRVISRFHLQEH------------EP--------------------------------VTSLVWSVTGETLVTGS----- 240 (351)
Q Consensus 210 ~~~~~~~~~~~~------------~~--------------------------------v~~~~~~~~~~~l~~~~----- 240 (351)
++.+..+..... .+ -..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 998876654320 00 01346677655554432
Q ss_pred ----------------------------CCCeEEEEeCCCCceeeeeec----ceeEEecCCceeeeeeccceeeEEEee
Q psy519 241 ----------------------------LTGTVQFYGWPSASKIGIGVY----PRCAAQPVGFEAATLAANSRVRTLREM 288 (351)
Q Consensus 241 ----------------------------~dg~i~i~~~~~~~~~~~~~~----~~~~~s~~~~~~~~~~~~~~~~~~~~~ 288 (351)
.+|.|..||+.+++.+-.... ..-.....+..+.+++.++ .++.+
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg---~l~A~ 512 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDG---YFKAF 512 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTS---EEEEE
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCC---cEEEE
Confidence 258899999999987643221 1222233455555565554 56677
Q ss_pred eceeCceEEE
Q psy519 289 HEIVGPVVVV 298 (351)
Q Consensus 289 ~~~~g~~~~~ 298 (351)
+..+|+...-
T Consensus 513 D~~tG~~lW~ 522 (582)
T 1flg_A 513 DAKSGKELWK 522 (582)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCCEEEE
Confidence 7777775543
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=2.1e-05 Score=74.88 Aligned_cols=230 Identities=14% Similarity=0.047 Sum_probs=152.5
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc----c----CCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCee
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY----T----SGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYP 83 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~----~----~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~ 83 (351)
..|.++...++ |.+. .|+.++-+..++.... . ......|.++...++|.+..|..++-+..++.++++.
T Consensus 363 ~~v~~i~~d~~--g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 363 KVVSSVCDDGQ--GKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SCEEEEEECTT--SCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEE
T ss_pred cceEEEEEcCC--CCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcE
Confidence 56888888887 7654 4555556888887654 1 1234679999999899997788778899999887764
Q ss_pred eEEee--CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccC-----CCCeEEEEEccCCCEEEEEecCCC
Q psy519 84 LRIFV--GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDH-----VSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 84 ~~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
..... .....|.++...+++. |..|+. +-+..+|..+++........ ...|.++...++|.+.+.. .
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~--- 513 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-F--- 513 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-S---
T ss_pred EEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-c---
Confidence 33221 1346788998888776 444555 56889998876654332212 3678999999888766554 3
Q ss_pred CCeEEEEEccCCceeEEecc----CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC---CCCEEEEEE
Q psy519 157 DKAVRLWSITDGASVRVFSD----HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQE---HEPVTSLVW 229 (351)
Q Consensus 157 d~~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~ 229 (351)
++-+..||.++++. ..+.. ....|.++...++|.+.++.. +|.+..||..+++. ..+.... ...+.++..
T Consensus 514 ~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~ 590 (781)
T 3v9f_A 514 GGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISE 590 (781)
T ss_dssp SSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEE
T ss_pred CCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcE-EEccccCCCCCceEEEEEE
Confidence 45688899766543 33321 234688999888888655544 66558888876653 3332221 245788999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCce
Q psy519 230 SVTGETLVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 230 ~~~~~~l~~~~~dg~i~i~~~~~~~~ 255 (351)
.++|.+.+++ .+| |..|+..+.+.
T Consensus 591 d~~g~lW~~t-~~G-l~~~~~~~~~~ 614 (781)
T 3v9f_A 591 DKNGNIWAST-NTG-ISCYITSKKCF 614 (781)
T ss_dssp CSSSCEEEEC-SSC-EEEEETTTTEE
T ss_pred CCCCCEEEEc-CCc-eEEEECCCCce
Confidence 8888866554 444 66777765543
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.78 E-value=8.2e-06 Score=71.83 Aligned_cols=197 Identities=10% Similarity=0.018 Sum_probs=119.3
Q ss_pred cceEEEEECCC---CcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCC-----cEEEEeCCC
Q psy519 51 MTVWSVEACSK---GLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYDK-----AVRLWSITD 122 (351)
Q Consensus 51 ~~i~~~~~~~~---~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg-----~i~i~d~~~ 122 (351)
.....++|.|+ +.+..+...+.|+.+++.+++..... ........++++++++ |+.+...+ .+...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 34668999984 67755544489999999887755443 3455688999999999 44444321 233333322
Q ss_pred Cce-eEEeccCCCCeEEEEEcc-CCCEEEEEecCCCCCeEEEEEccCCceeEEe-cc-CCCCEEEEEECCCCcEEEE-Ec
Q psy519 123 GAS-VRVFSDHVSPVLSIAFSP-CGKYLASGGTGSYDKAVRLWSITDGASVRVF-SD-HVSPVLSIAFSPCGKYLAS-GG 197 (351)
Q Consensus 123 ~~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~-~~ 197 (351)
+.. ...+. .......++++| ++.++++-.. ++.|+.+|..++.....+ .. .......++|+|++++|+. -.
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~---~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYH---HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTT---CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECC---CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 211 01121 223446688999 5655554434 788999998877652222 21 1222346999999985554 45
Q ss_pred CCCeEEEEEcC--CCcE--EEEeecc--------------CCCCEEEEEE---------cCCCCEEEEEeCCCeEEEEeC
Q psy519 198 EDGLVLTHELT--TGRV--ISRFHLQ--------------EHEPVTSLVW---------SVTGETLVTGSLTGTVQFYGW 250 (351)
Q Consensus 198 ~dg~i~i~d~~--~~~~--~~~~~~~--------------~~~~v~~~~~---------~~~~~~l~~~~~dg~i~i~~~ 250 (351)
..+.|+.++.. ++.. ...+... .-.....+++ .+++.+.++-...++|+.++.
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 57889998865 2321 1111110 0124678999 777777777667788999884
Q ss_pred CCCc
Q psy519 251 PSAS 254 (351)
Q Consensus 251 ~~~~ 254 (351)
++.
T Consensus 373 -~G~ 375 (433)
T 4hw6_A 373 -EGR 375 (433)
T ss_dssp -TSE
T ss_pred -CCC
Confidence 443
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.78 E-value=1e-05 Score=65.34 Aligned_cols=192 Identities=8% Similarity=0.058 Sum_probs=123.9
Q ss_pred CCccceEEeeecCCcccc-EEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCC
Q psy519 9 GDHKHFIQNSFKPETVED-VLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQM 81 (351)
Q Consensus 9 ~~~~~v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~ 81 (351)
+-...+..++|+|+ ++ ++++...++.|...|.... ...-....-.+++.+++.+ ++.-.++.+.++++...
T Consensus 24 g~~~~lSGla~~~~--~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQ--SNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETT--TTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCC--CCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 34457899999998 65 4455677888888888744 1122245678888899988 55556788999987654
Q ss_pred ee---eEEee------CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCC---CCceeEEec-------cCCCCeEEEEEc
Q psy519 82 YP---LRIFV------GHKQDVTCARFHPKITYIGTGSYDKAVRLWSIT---DGASVRVFS-------DHVSPVLSIAFS 142 (351)
Q Consensus 82 ~~---~~~~~------~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~-------~~~~~i~~~~~~ 142 (351)
.. +.... ..+.....++|+|+++.|+++.......+|.+. ....+..+. .....+.+++++
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 32 22221 234556899999998877777766555555543 111122221 123457899999
Q ss_pred cCCCEEE-EEecCCCCCeEEEEEccCCceeEEeccCC---------CCEEEEEECCCCcEEEEEcCCCeEEEEEc
Q psy519 143 PCGKYLA-SGGTGSYDKAVRLWSITDGASVRVFSDHV---------SPVLSIAFSPCGKYLASGGEDGLVLTHEL 207 (351)
Q Consensus 143 ~~~~~l~-~~~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 207 (351)
|....++ .... ++.+..+|.+ ++.+..+.-.. .....|+|.++|+.. +.++.+.++.|..
T Consensus 182 p~tg~lliLS~~---s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ly-IvsE~n~~y~f~~ 251 (255)
T 3qqz_A 182 QQKNTLLVLSHE---SRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIY-IVSEPNRFYRFTP 251 (255)
T ss_dssp TTTTEEEEEETT---TTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEE-EEETTTEEEEEEC
T ss_pred CCCCeEEEEECC---CCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEE-EEcCCceEEEEEe
Confidence 9655544 4444 7889999965 55555543221 356899999999844 4467777776653
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.74 E-value=7.9e-05 Score=64.89 Aligned_cols=202 Identities=9% Similarity=0.013 Sum_probs=132.0
Q ss_pred ccceEEeeecCCccccEEE-EecCCCceEEEecCCc---------cCCCccceEEEEECC-CCcE-EEEeCCCcEEEEeC
Q psy519 11 HKHFIQNSFKPETVEDVLA-NLESQKNLQSRYLPYY---------TSGHDMTVWSVEACS-KGLA-LTGSRDTTARLWSL 78 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~-~~~~~~~i~i~~~~~~---------~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~ 78 (351)
...+..++|++. +..|. +-...+.|+.+++... ..........+++.+ .+.+ ++-...+.|.+.++
T Consensus 111 ~~~~~~l~~d~~--~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 111 LRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCEEEEEEETT--TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cCcceEEeeeec--cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 356788999986 55554 4445678888887651 222334567788876 4555 66677889999998
Q ss_pred CCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCC
Q psy519 79 EQMYPLRIFVGHKQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
+.......+...-.....+++.|.+..|+.+.. .+.|...++............-.....+++++++..|+.+...
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~-- 266 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-- 266 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT--
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC--
Confidence 866544444444456789999996666655542 3789999986544333333334567899999988888877542
Q ss_pred CCeEEEEEccCCceeEEecc--CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee
Q psy519 157 DKAVRLWSITDGASVRVFSD--HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH 217 (351)
Q Consensus 157 d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 217 (351)
.+.|..+|+........... .-.....+++. .+.++++-...+.|..+|..+++.+..+.
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 267 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 67899999865433332222 22345677773 44556666677889889977777666664
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=1.9e-05 Score=69.51 Aligned_cols=151 Identities=11% Similarity=0.088 Sum_probs=96.0
Q ss_pred ceEEEEECC--CCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC-C----cEEEEeCCCCc
Q psy519 52 TVWSVEACS--KGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYD-K----AVRLWSITDGA 124 (351)
Q Consensus 52 ~i~~~~~~~--~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-g----~i~i~d~~~~~ 124 (351)
....++++| ++.+..+...+.|+.+|+++++..... ........++|+++++.|+++... + .+..++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 456789997 356644444488999999876644333 345567899999999966666542 2 3444443 332
Q ss_pred ee--EEeccCCCCeEEEEEcc-CCCEEEEEecCCCCCeEEEEEccCCceeEEecc-CCCCEEEEEECCCCcEEE-EEcCC
Q psy519 125 SV--RVFSDHVSPVLSIAFSP-CGKYLASGGTGSYDKAVRLWSITDGASVRVFSD-HVSPVLSIAFSPCGKYLA-SGGED 199 (351)
Q Consensus 125 ~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~-~~~~d 199 (351)
.. ..+.. ......++++| ++.++++-.. ++.|..+|...+........ .......++|+|++++|+ +-...
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~---~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWN---AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETT---TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECC---CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 22 22222 23456788999 5665555444 78999999876654222221 223467899999999554 44567
Q ss_pred CeEEEEEcC
Q psy519 200 GLVLTHELT 208 (351)
Q Consensus 200 g~i~i~d~~ 208 (351)
+.|..++..
T Consensus 292 ~~I~~~~~d 300 (430)
T 3tc9_A 292 HYILRSDYD 300 (430)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEeCC
Confidence 889998765
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.74 E-value=3.8e-05 Score=64.62 Aligned_cols=227 Identities=8% Similarity=-0.014 Sum_probs=140.8
Q ss_pred EEEEecCCCceEEEecCCcc------CCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCeee-EEeeCCCCCeEEE
Q psy519 27 VLANLESQKNLQSRYLPYYT------SGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQMYPL-RIFVGHKQDVTCA 97 (351)
Q Consensus 27 ~l~~~~~~~~i~i~~~~~~~------~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~~~-~~~~~~~~~i~~i 97 (351)
+|+.+. ...|+..++.... .........++|.+. +.+ .+-...+.|..+++...... ..+...-.....+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 444443 4568888887541 111234567889874 455 66667788999998765321 2222222346688
Q ss_pred EEeCC-CCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEecc
Q psy519 98 RFHPK-ITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSD 176 (351)
Q Consensus 98 ~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 176 (351)
++.+. ++++++-...+.|.++++........+.........++++|.+..|+.+..+ ..+.|...++...........
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~~~~~~~~ 163 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINS 163 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCSCEEEECS
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCCeEEEEEC
Confidence 99874 4555555567899999987543333333444667899999977777666531 147888888764333222333
Q ss_pred CCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy519 177 HVSPVLSIAFSPCGKYLASG-GEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 177 ~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 255 (351)
.-.....++++|++..|+.+ +..+.|..+|+.... ...+..........+++.. +.++.+-...+.|..++..+++.
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence 33457899999966655544 567889999986433 2333222335677888853 34455555678999999877765
Q ss_pred ee
Q psy519 256 IG 257 (351)
Q Consensus 256 ~~ 257 (351)
..
T Consensus 242 ~~ 243 (318)
T 3sov_A 242 LR 243 (318)
T ss_dssp CE
T ss_pred eE
Confidence 43
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.72 E-value=4.4e-05 Score=64.24 Aligned_cols=201 Identities=7% Similarity=-0.001 Sum_probs=128.6
Q ss_pred cceEEeeecCCccccEE-EEecCCCceEEEecCCccC------CCccceEEEEECC-CCcE-EEEeCCCcEEEEeCCCCe
Q psy519 12 KHFIQNSFKPETVEDVL-ANLESQKNLQSRYLPYYTS------GHDMTVWSVEACS-KGLA-LTGSRDTTARLWSLEQMY 82 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l-~~~~~~~~i~i~~~~~~~~------~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~~~~~ 82 (351)
....+++|++. +..| ++-...+.|..++...... ..-.....+++.+ .+.+ ++-...+.|.+++++...
T Consensus 35 ~~~~~ld~d~~--~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 35 EDAAAVDFVFS--HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEGG--GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEeC--CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 34668899986 4444 4545567888888765410 1112445677775 4555 666677899999987544
Q ss_pred eeEEeeCCCCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeE
Q psy519 83 PLRIFVGHKQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAV 160 (351)
Q Consensus 83 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i 160 (351)
..............+++.|.+..|+.+.. .+.|...++............-.....++++|++..|+.+... .+.|
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~--~~~I 190 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK--LNFI 190 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT--TTEE
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECC--CCEE
Confidence 33333344456789999997666655553 5788888876433222223333456899999988877776542 6889
Q ss_pred EEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee
Q psy519 161 RLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH 217 (351)
Q Consensus 161 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 217 (351)
..+|+..................+++. .+.++.+-...+.|..++..+++....+.
T Consensus 191 ~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 191 HKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 999986443333333334456777775 34555666677889999987777665554
No 283
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.69 E-value=9.5e-05 Score=62.17 Aligned_cols=200 Identities=10% Similarity=0.028 Sum_probs=127.4
Q ss_pred cceEEeeecCCccccEE-EEecCCCceEEEecCC----c-----cCCCccceEEEEECC-CCcE-EEEeCCCcEEEEeCC
Q psy519 12 KHFIQNSFKPETVEDVL-ANLESQKNLQSRYLPY----Y-----TSGHDMTVWSVEACS-KGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l-~~~~~~~~i~i~~~~~----~-----~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~~ 79 (351)
.....++|++. +..| ++-...+.|..+++.. . ..........+++.+ .+.+ ++-...+.|.+.+++
T Consensus 30 ~~p~g~~~d~~--~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 30 RNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEEeC--CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 44678999987 5544 4545568899998875 2 111223456788875 4455 666778899999987
Q ss_pred CCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC--CcEEEEeCCCCceeEEe-ccCCCCeEEEEEccCCCEEEEEecCCC
Q psy519 80 QMYPLRIFVGHKQDVTCARFHPKITYIGTGSYD--KAVRLWSITDGASVRVF-SDHVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 80 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
.......+.........+++.|.+..|+.+... +.|...++.. +....+ ...-.....++++|++..|+.+...
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~-- 184 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-- 184 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETT--
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECC--
Confidence 554333333344567899999966665555443 6888888753 333333 2234567899999988888776542
Q ss_pred CCeEEEEEccCCceeEEecc--CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee
Q psy519 157 DKAVRLWSITDGASVRVFSD--HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH 217 (351)
Q Consensus 157 d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 217 (351)
.+.|..+|+........... .......+++. .+.++++-...+.|..++..+++.+..+.
T Consensus 185 ~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 185 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 67899999864332222221 22346678875 45666666677889988887776655553
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.68 E-value=2.3e-05 Score=65.67 Aligned_cols=187 Identities=17% Similarity=0.237 Sum_probs=124.1
Q ss_pred EEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCC----CC---EEEEEeC---CCcEEEEeC--CCCceeEEecc
Q psy519 64 ALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPK----IT---YIGTGSY---DKAVRLWSI--TDGASVRVFSD 131 (351)
Q Consensus 64 ~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~----~~---~l~~~~~---dg~i~i~d~--~~~~~~~~~~~ 131 (351)
++.....+-+.|||+ +++.++.+.. ..++.+..-|+ ++ ++++... +++|.+|++ .++ .+..+..
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~~ 118 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMTD 118 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECSC
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeeccc
Confidence 366677889999999 7888887753 55677776663 22 2333333 478999976 333 3444421
Q ss_pred ------CC-CCeEEEEE--ccC-CC-EEEEEecCCCCCeEEEEEcc-------CCceeEEeccCCCCEEEEEECCCCcEE
Q psy519 132 ------HV-SPVLSIAF--SPC-GK-YLASGGTGSYDKAVRLWSIT-------DGASVRVFSDHVSPVLSIAFSPCGKYL 193 (351)
Q Consensus 132 ------~~-~~i~~~~~--~~~-~~-~l~~~~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l 193 (351)
.. ..+..+++ +|. +. ++++... ++.+..|++. +.+.++++.. .+.+..+...+....|
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k---~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK---EGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECS---SSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECC---CCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 11 55667777 774 44 5666666 8999999983 2355667654 4578889999988899
Q ss_pred EEEcCCCeEEEEEcC-----CCcEEEEeeccCC-CCEEEEEE--cCCCC-EEEEEe-CCCeEEEEeCC-CCceeee
Q psy519 194 ASGGEDGLVLTHELT-----TGRVISRFHLQEH-EPVTSLVW--SVTGE-TLVTGS-LTGTVQFYGWP-SASKIGI 258 (351)
Q Consensus 194 ~~~~~dg~i~i~d~~-----~~~~~~~~~~~~~-~~v~~~~~--~~~~~-~l~~~~-~dg~i~i~~~~-~~~~~~~ 258 (351)
+.+-++.-|..|+.+ +++.+..+...+- ..+..|++ .++++ +|++.+ .++.+.+||.+ +.+.+..
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~ 270 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVAD 270 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEE
Confidence 999998778788855 3445544422222 46888888 45555 666665 57899999996 5554444
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.59 E-value=4.3e-05 Score=63.47 Aligned_cols=194 Identities=10% Similarity=0.098 Sum_probs=123.0
Q ss_pred EEEEECC-CCcE-EEEeCCCcEEEEeCCCCeeeEEeeCC-------CCCeEEEEE---eCCCCEEEEEe-----------
Q psy519 54 WSVEACS-KGLA-LTGSRDTTARLWSLEQMYPLRIFVGH-------KQDVTCARF---HPKITYIGTGS----------- 110 (351)
Q Consensus 54 ~~~~~~~-~~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~-------~~~i~~i~~---~~~~~~l~~~~----------- 110 (351)
.+++|.+ ++.+ ++.-..++|..|+...+......... ...+.++.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3578876 4566 55557999999999865433322111 113579999 68877777543
Q ss_pred --CCCcEEEEeCC---CCceeEEec--c-----------CCCCeEEEEEccCCCEEEEEecCCCC-CeEEEEEccCCcee
Q psy519 111 --YDKAVRLWSIT---DGASVRVFS--D-----------HVSPVLSIAFSPCGKYLASGGTGSYD-KAVRLWSITDGASV 171 (351)
Q Consensus 111 --~dg~i~i~d~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~~~~d-~~i~i~d~~~~~~~ 171 (351)
.+..+..||+. +++.+.... . .......++..++|+..++++. . +.|...+... +.+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~---~~~~I~rV~pdG-~~~ 171 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL---GMPAIARVSADG-KTV 171 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE---SSCEEEEECTTS-CCE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC---CCCeEEEEeCCC-CEE
Confidence 25779999998 777665432 1 1134789999999999998887 6 7777777543 333
Q ss_pred EEec------cCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc------CCCCEEEE-EEcCCCCE-EE
Q psy519 172 RVFS------DHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ------EHEPVTSL-VWSVTGET-LV 237 (351)
Q Consensus 172 ~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~~v~~~-~~~~~~~~-l~ 237 (351)
..+. ......+.++++|+|+.|++....|.+..+|+...... .+... .......+ ..-.+|+. |+
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~-~v~~~~~G~~~~~~~~dgilp~~~~G~vllV 250 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW-PEPVKINGDFGTLSGTEKIVTVPVGNESVLV 250 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC-CEECEESSCCCCCTTEEEEEEEEETTEEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce-eecccccCCcccccCcccccccccCCEEEEE
Confidence 3221 11123568999999998888877999999998853320 12111 11234443 33346777 44
Q ss_pred EEeCCCeEEEEeCCC
Q psy519 238 TGSLTGTVQFYGWPS 252 (351)
Q Consensus 238 ~~~~dg~i~i~~~~~ 252 (351)
+....+.+.+.+...
T Consensus 251 ~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 251 GARAPYAISFRSWDN 265 (334)
T ss_dssp EEETTEEEEEECSST
T ss_pred EcCCCCEEEEECCCC
Confidence 555566666666554
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.59 E-value=0.00017 Score=63.87 Aligned_cols=237 Identities=12% Similarity=0.054 Sum_probs=139.2
Q ss_pred ceEEeeecCCccccEEEEecCCCceEEEecCCc-----c---CCCccceEEEEE-------CCCCc-EEEEeCCC-----
Q psy519 13 HFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----T---SGHDMTVWSVEA-------CSKGL-ALTGSRDT----- 71 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~---~~~~~~i~~~~~-------~~~~~-~~~~~~d~----- 71 (351)
....|+|+|.+.+.++++-...+.|++.|+... . .........++| +++|. ++.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 457899999211445555444567888888875 1 112346899999 99997 45554433
Q ss_pred --cEEEEeCCC-Ceee-----EEeeCCCCCeEEEEEeCC-CCEEEEEeCCCcEEEEeCC-------CCce----------
Q psy519 72 --TARLWSLEQ-MYPL-----RIFVGHKQDVTCARFHPK-ITYIGTGSYDKAVRLWSIT-------DGAS---------- 125 (351)
Q Consensus 72 --~i~vw~~~~-~~~~-----~~~~~~~~~i~~i~~~~~-~~~l~~~~~dg~i~i~d~~-------~~~~---------- 125 (351)
.|.+++... ++.. ..+... .....++.+|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665443 2221 122211 23457788994 5555566677889999987 4543
Q ss_pred -eEE-ec-cCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC--Cce--eEEeccC---C------------CCEE-
Q psy519 126 -VRV-FS-DHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD--GAS--VRVFSDH---V------------SPVL- 182 (351)
Q Consensus 126 -~~~-~~-~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~--~~~--~~~~~~~---~------------~~i~- 182 (351)
... +. +.....+.++|+|+|+.|+.+... ...|+.+|... +.. ...+.+. . ....
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~--~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN--NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCC--CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 112 11 123446789999999976666432 77899866543 221 0122111 0 1234
Q ss_pred EEEEC-------CCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC-----------------------CCCEEEEEEcCC
Q psy519 183 SIAFS-------PCGKYLASGGEDGLVLTHELTTGRVISRFHLQE-----------------------HEPVTSLVWSVT 232 (351)
Q Consensus 183 ~~~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------------------~~~v~~~~~~~~ 232 (351)
.++.. +++.++++=..+..|+.++ .++. +.++.... -.....|+++++
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 44554 4566777767788899988 4554 33332110 124678888886
Q ss_pred -CCEEEEEeCCCeEEEEeCCCCc
Q psy519 233 -GETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 233 -~~~l~~~~~dg~i~i~~~~~~~ 254 (351)
+.+.++=..+.+|+.++++...
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECCCC
T ss_pred CCEEEEEeCCCCEEEEEECCCCc
Confidence 6665665567788888876543
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.58 E-value=0.00033 Score=66.14 Aligned_cols=227 Identities=8% Similarity=-0.044 Sum_probs=139.1
Q ss_pred EEEEecCCCceEEEecCCc----cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCC----eeeEEeeCCCCCeEE
Q psy519 27 VLANLESQKNLQSRYLPYY----TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQM----YPLRIFVGHKQDVTC 96 (351)
Q Consensus 27 ~l~~~~~~~~i~i~~~~~~----~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~i~~ 96 (351)
+|+.+ ....|+..++... +......+..++|.+. +.+ ++-...+.|+.+++... .....+.........
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred ccccc-cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 34443 3345777777644 2223456778999874 445 66666788999988753 223333334455678
Q ss_pred EEEeCCCC-EEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEec
Q psy519 97 ARFHPKIT-YIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFS 175 (351)
Q Consensus 97 i~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~ 175 (351)
|++.+.++ ++++-...+.|.+.++........+.........|+++|.+.+|+.+..+ ..+.|...++........+.
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~dG~~~~~lv~ 554 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVT 554 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCCEEEEEC
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC-CCCeEEEEecCCCceEEEEe
Confidence 99988665 44555567899999987554433444444568899999987777766531 12679999986544444444
Q ss_pred cCCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcCCCcEEEEeecc-CCCCEEEEEEcCCCCEEEE-EeCCCeEEEEeCCC
Q psy519 176 DHVSPVLSIAFSPCGKYLASG-GEDGLVLTHELTTGRVISRFHLQ-EHEPVTSLVWSVTGETLVT-GSLTGTVQFYGWPS 252 (351)
Q Consensus 176 ~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~~~~~ 252 (351)
..-.....|++++.+..|+.+ ...+.|..+++........+... .-....+|++. +..|+. -...+.|...+..+
T Consensus 555 ~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~t 632 (791)
T 3m0c_C 555 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLT 632 (791)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTT
T ss_pred CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCC
Confidence 344578899999866655555 45678999998644333322211 11345677764 334444 44568888888777
Q ss_pred Cceee
Q psy519 253 ASKIG 257 (351)
Q Consensus 253 ~~~~~ 257 (351)
++.+.
T Consensus 633 G~~~~ 637 (791)
T 3m0c_C 633 GSDVN 637 (791)
T ss_dssp CCCCE
T ss_pred CcceE
Confidence 75443
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.49 E-value=6.4e-06 Score=76.77 Aligned_cols=226 Identities=10% Similarity=-0.018 Sum_probs=126.2
Q ss_pred eEEeeecCCccccEEEEecC-CCceEEEecCCc----cC--CCccceEEEEECCCCcE-EEEe-CC-----CcEEEEeCC
Q psy519 14 FIQNSFKPETVEDVLANLES-QKNLQSRYLPYY----TS--GHDMTVWSVEACSKGLA-LTGS-RD-----TTARLWSLE 79 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~~~-~~~i~i~~~~~~----~~--~~~~~i~~~~~~~~~~~-~~~~-~d-----~~i~vw~~~ 79 (351)
..++++.++ ++++++|+. +..+.+||..+. .. .....-.+++..+++++ +.|+ .+ ..+.+||..
T Consensus 245 ~~~~~~~~~--g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDGN--GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECTT--SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccccCCCC--CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 345677788 999999984 457999998766 11 11111234556678877 7777 34 569999998
Q ss_pred CCeeeEEe----eCCCCCeEEEEEeCCCCEEEEEeCC---------CcEEEEeCCCCceeEEeccCC---------CCeE
Q psy519 80 QMYPLRIF----VGHKQDVTCARFHPKITYIGTGSYD---------KAVRLWSITDGASVRVFSDHV---------SPVL 137 (351)
Q Consensus 80 ~~~~~~~~----~~~~~~i~~i~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~---------~~i~ 137 (351)
+.+-...- ......-....+..++..++.++.+ ..+..||..+........... ..-.
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred CCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 76543220 0000000001122344444555444 456788887766443322111 1224
Q ss_pred EEEEcc-CCCEEEEEecCCCC-----C---eEEEEEccCCceeEEe--ccCCCC-EEEEEECCCCcEEEEEcCC------
Q psy519 138 SIAFSP-CGKYLASGGTGSYD-----K---AVRLWSITDGASVRVF--SDHVSP-VLSIAFSPCGKYLASGGED------ 199 (351)
Q Consensus 138 ~~~~~~-~~~~l~~~~~~~~d-----~---~i~i~d~~~~~~~~~~--~~~~~~-i~~~~~~~~~~~l~~~~~d------ 199 (351)
++.|.. ++++++.|+....+ . .+.+||..+..-.... ...... -..++..|++++++.|+.+
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 455543 67777887741111 1 6888888766533322 111121 2345667899999998754
Q ss_pred -----CeEEEEEcCCCcEEEEeeccCC-CCEEEEEEcCCCCEEEEEeC
Q psy519 200 -----GLVLTHELTTGRVISRFHLQEH-EPVTSLVWSVTGETLVTGSL 241 (351)
Q Consensus 200 -----g~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~ 241 (351)
..+.+||..+.+-...-..... .......+.|++++++.|+.
T Consensus 483 ~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 4689999977653321111111 12234556789999999885
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.46 E-value=0.00047 Score=58.22 Aligned_cols=225 Identities=9% Similarity=0.003 Sum_probs=127.6
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc--------cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCe
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--------TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMY 82 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~ 82 (351)
...+.++.|+|+ ..++++ ..+.|.. ..+.+ ...+...+..+.+.+++.++.++.++.|..- .+.++
T Consensus 79 ~~~~~~i~~~~~---~~~~~g-~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQGN---EGWIVG-EPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGK 152 (327)
T ss_dssp CCEEEEEEEETT---EEEEEE-ETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTS
T ss_pred CccEEEEEecCC---eEEEEE-CCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCC
Confidence 457888999754 344444 4554432 22222 1123355778888777777555556654322 12222
Q ss_pred e-eEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEE-EeCCCCceeEE-eccCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 83 P-LRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRL-WSITDGASVRV-FSDHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 83 ~-~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i-~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
. ..........+..+.+.+++.+++.+. +|.++. .|- .++.-.. -......+..+++.+++..++.+ . +|.
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~---~G~ 226 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-N---GGK 226 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEEEEE-T---TTE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEEEEe-C---Cce
Confidence 1 122234456788999999888877665 454443 342 1222111 12345678899999988776654 4 777
Q ss_pred EEEEEccCCceeEEecc----CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc--CCCCEEEEEEcCCC
Q psy519 160 VRLWSITDGASVRVFSD----HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ--EHEPVTSLVWSVTG 233 (351)
Q Consensus 160 i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~ 233 (351)
+++.+...++.-..+.. ....+..+.+.+++..++++. +|.+ ++....++.-..+... ....+..+.|.+++
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~ 304 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD 304 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT
T ss_pred EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC
Confidence 77764222332222211 223588999998888777665 5656 4455555544443321 23567888887555
Q ss_pred CEEEEEeCCCeEEEEeC
Q psy519 234 ETLVTGSLTGTVQFYGW 250 (351)
Q Consensus 234 ~~l~~~~~dg~i~i~~~ 250 (351)
. +++++.+|.|.-++-
T Consensus 305 ~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 Q-GFILGQKGILLRYVT 320 (327)
T ss_dssp E-EEEECSTTEEEEECC
T ss_pred c-eEEEcCCceEEEEcC
Confidence 5 556667888776653
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.45 E-value=0.00064 Score=64.26 Aligned_cols=203 Identities=9% Similarity=0.006 Sum_probs=128.7
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc---------cCCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCC
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY---------TSGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~---------~~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~ 79 (351)
...+..++|++.. +.++++-...+.|+.+++... ..........|++.+.+ ++ ++-...+.|.+.++.
T Consensus 423 ~~~~~gl~~d~~~-~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccC-CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 3456789999851 444455555677888887642 11123445677877655 44 677778899999988
Q ss_pred CCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC
Q psy519 80 QMYPLRIFVGHKQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 80 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d 157 (351)
.......+.........|++.|.+..|+.+.. .+.|...++........+.........|++++.+..|+.+... .
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~--~ 579 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK--L 579 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT--T
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC--C
Confidence 65544444444456889999997666655543 2679999987544434444344678899999888887777542 6
Q ss_pred CeEEEEEccCCceeEEecc--CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee
Q psy519 158 KAVRLWSITDGASVRVFSD--HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH 217 (351)
Q Consensus 158 ~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 217 (351)
..|..+|+........... .-.....|++. .+.++++-...+.|...+..+++.+..+.
T Consensus 580 ~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 580 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 7899999865443333332 12234567664 33455555567788888877776665553
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=0.00051 Score=60.84 Aligned_cols=199 Identities=12% Similarity=0.054 Sum_probs=118.7
Q ss_pred ceEEEEECCC--CcE-EEEeCCCcEEEEeCCCCeeeEEeeCC---CCCeEEEEE-------eCCCCEEEEEeCCC-----
Q psy519 52 TVWSVEACSK--GLA-LTGSRDTTARLWSLEQMYPLRIFVGH---KQDVTCARF-------HPKITYIGTGSYDK----- 113 (351)
Q Consensus 52 ~i~~~~~~~~--~~~-~~~~~d~~i~vw~~~~~~~~~~~~~~---~~~i~~i~~-------~~~~~~l~~~~~dg----- 113 (351)
....|+|.|. +.+ ++....+.|++.|++++......... ......++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 455 55555578999999887765444322 235789999 99999776666554
Q ss_pred --cEEEEeCCC-Ccee-----EEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEcc-------CCce--------
Q psy519 114 --AVRLWSITD-GASV-----RVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSIT-------DGAS-------- 170 (351)
Q Consensus 114 --~i~i~d~~~-~~~~-----~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~-------~~~~-------- 170 (351)
.+.+++... +... ..+... .....++++|++..|+.+... ++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~--~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYE--KGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETT--TTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECC--CCEEEEEecccccccccCceeeccccccc
Confidence 266776443 2221 222222 234568899965555544431 7889999997 5543
Q ss_pred ---eEE-ec-cCCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcC--CCcE--EEEeecc--C------------CCCEE-
Q psy519 171 ---VRV-FS-DHVSPVLSIAFSPCGKYLASG-GEDGLVLTHELT--TGRV--ISRFHLQ--E------------HEPVT- 225 (351)
Q Consensus 171 ---~~~-~~-~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~--~~~~--~~~~~~~--~------------~~~v~- 225 (351)
... +. ........++|+|+|++|+.+ +....|+.++.. .+.. ...+... . -....
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 112 21 223446789999999965444 567788886653 2221 0112110 0 01345
Q ss_pred EEEEc-------CCCCEEEEEeCCCeEEEEeCCCCc
Q psy519 226 SLVWS-------VTGETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 226 ~~~~~-------~~~~~l~~~~~dg~i~i~~~~~~~ 254 (351)
.++.. +++.+.++=..+.+|+.++ +++.
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~ 411 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI 411 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC
Confidence 45554 4566666666678899888 4443
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.42 E-value=0.00058 Score=57.66 Aligned_cols=253 Identities=9% Similarity=0.023 Sum_probs=138.0
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc-----c----CCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCC
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----T----SGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQM 81 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~----~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~ 81 (351)
...+.+|.|.+. +..++++ ..|.|. ...+.+ . ......+.++.|.+ +....++..+.|.. ....+
T Consensus 35 ~~~~~~v~~~~~--~~~~~~G-~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDR--HHGWLVG-VNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGG 108 (327)
T ss_dssp SSCEEEEEESSS--SCEEEEE-TTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTT
T ss_pred CCcEEEEEECCC--CcEEEEc-CCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCC
Confidence 457899999877 7777755 456542 233322 1 11245788999986 45544455665443 22323
Q ss_pred e---eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCcee-EEeccCCCCeEEEEEccCCCEEEEEecCCCC
Q psy519 82 Y---PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASV-RVFSDHVSPVLSIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 82 ~---~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d 157 (351)
+ .+.....+...+..+.+.+++..++.+ .+|.|.. ....++.- .........+..+++.|++.+++++. +
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~----~ 182 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS----R 182 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET----T
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC----C
Confidence 3 221111233457778877776666655 4565432 22233322 22234456789999999988887764 4
Q ss_pred CeEEE-EEccCCceeEEe-ccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc---CCCCEEEEEEcCC
Q psy519 158 KAVRL-WSITDGASVRVF-SDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ---EHEPVTSLVWSVT 232 (351)
Q Consensus 158 ~~i~i-~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~ 232 (351)
+.+.. .|- .++.-..+ ......+..+.+.+++..++++ .+|.+++.+...++.-..+... ....+..+.+.++
T Consensus 183 G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 183 GSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp SSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS
T ss_pred CcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEEEEe-CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC
Confidence 44443 332 12222221 2345678899999988766554 5787776642224333322212 2235889999988
Q ss_pred CCEEEEEeCCCeEEEEeCCCCce---ee-----eeecceeEEecCCceeeeeeccc
Q psy519 233 GETLVTGSLTGTVQFYGWPSASK---IG-----IGVYPRCAAQPVGFEAATLAANS 280 (351)
Q Consensus 233 ~~~l~~~~~dg~i~i~~~~~~~~---~~-----~~~~~~~~~s~~~~~~~~~~~~~ 280 (351)
+.+++++. +|.+ ++....++. +. ...+..+.+.+++.. .+++.++
T Consensus 261 ~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~-~~~G~~G 313 (327)
T 2xbg_A 261 NEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQG-FILGQKG 313 (327)
T ss_dssp SCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEE-EEECSTT
T ss_pred CEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCce-EEEcCCc
Confidence 88777664 6666 334443322 11 123456666655443 3444444
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.36 E-value=3.9e-06 Score=78.54 Aligned_cols=223 Identities=8% Similarity=-0.034 Sum_probs=128.8
Q ss_pred CCceEEEecCCc----cCCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCC----CeeeEEeeCCCCCeEEEEEeCC-
Q psy519 34 QKNLQSRYLPYY----TSGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQ----MYPLRIFVGHKQDVTCARFHPK- 102 (351)
Q Consensus 34 ~~~i~i~~~~~~----~~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~----~~~~~~~~~~~~~i~~i~~~~~- 102 (351)
.+.|+..++... .......+..++|.+.+ .+ ++-...+.|+.+++.+ ......+.........|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 356777777654 22223456678898755 44 4445568899999875 2222222222223456788754
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEE
Q psy519 103 ITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVL 182 (351)
Q Consensus 103 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 182 (351)
++++++-...+.|.++++........+.........++++|.+.+|+.+..+ ..+.|..+++............-....
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS-SSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC-CCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 4455554567889999987554433333333456789999976666655431 126788888754332222222233456
Q ss_pred EEEECCCCc-EEEEEcCCCeEEEEEcCCCcEEEEeecc-CCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q psy519 183 SIAFSPCGK-YLASGGEDGLVLTHELTTGRVISRFHLQ-EHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 183 ~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 258 (351)
.|+|+|++. ++++-+..+.|..+++........+... .......|++..+ .++++....+.|..++..+++.+..
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEEC
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEE
Confidence 899998755 4455556778999998643322222111 1133456666543 4444555578999999887776654
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.35 E-value=0.00029 Score=59.07 Aligned_cols=199 Identities=14% Similarity=0.165 Sum_probs=126.1
Q ss_pred EeeecCCcc-ccEEEEecCCCceEEEecCCc-cCC-CccceEEEEECCC----Cc---E--EEEeC--CCcEEEEeC--C
Q psy519 16 QNSFKPETV-EDVLANLESQKNLQSRYLPYY-TSG-HDMTVWSVEACSK----GL---A--LTGSR--DTTARLWSL--E 79 (351)
Q Consensus 16 ~~~~sp~~~-~~~l~~~~~~~~i~i~~~~~~-~~~-~~~~i~~~~~~~~----~~---~--~~~~~--d~~i~vw~~--~ 79 (351)
++-.+|.+. ..+++.....+-+.+||+... +.. ..+.++.+..-|+ |+ + ++.-. +++|.+|++ .
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~ 109 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK 109 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC
Confidence 344445311 455666667788999999665 111 1245666665543 21 3 33344 588999976 3
Q ss_pred CCeeeEEeeC------CC-CCeEEEEE--eCC-CC-EEEEEeCCCcEEEEeCC-------CCceeEEeccCCCCeEEEEE
Q psy519 80 QMYPLRIFVG------HK-QDVTCARF--HPK-IT-YIGTGSYDKAVRLWSIT-------DGASVRVFSDHVSPVLSIAF 141 (351)
Q Consensus 80 ~~~~~~~~~~------~~-~~i~~i~~--~~~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~i~~~~~ 141 (351)
+++ +..+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.++.+. ..+.+..++.
T Consensus 110 ~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~Egcvv 187 (355)
T 3amr_A 110 NGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAA 187 (355)
T ss_dssp TCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEE
T ss_pred CCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEE
Confidence 433 444421 11 45666777 664 43 67778889999999883 335566765 3568899999
Q ss_pred ccCCCEEEEEecCCCCCeEEEEEcc-----CCceeEEec--cCCCCEEEEEE--CCCCc-EEEEEc-CCCeEEEEEcC-C
Q psy519 142 SPCGKYLASGGTGSYDKAVRLWSIT-----DGASVRVFS--DHVSPVLSIAF--SPCGK-YLASGG-EDGLVLTHELT-T 209 (351)
Q Consensus 142 ~~~~~~l~~~~~~~~d~~i~i~d~~-----~~~~~~~~~--~~~~~i~~~~~--~~~~~-~l~~~~-~dg~i~i~d~~-~ 209 (351)
.+....|+.+-+ +..|..||.+ +++.+..+. .....+..|++ .++++ +|++++ .+....+||.. +
T Consensus 188 Dd~~g~Lyv~eE---d~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 188 DDEYGRLYIAEE---DEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp ETTTTEEEEEET---TTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred cCCCCeEEEecc---cceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 998899999988 7777777755 234454442 12246788887 45555 666666 57799999996 5
Q ss_pred CcEEEEeecc
Q psy519 210 GRVISRFHLQ 219 (351)
Q Consensus 210 ~~~~~~~~~~ 219 (351)
.+.+..|...
T Consensus 265 ~~~vg~f~Ig 274 (355)
T 3amr_A 265 NKYVADFRIT 274 (355)
T ss_dssp CCEEEEEEEC
T ss_pred CcEEEEEEec
Confidence 6666666543
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.31 E-value=0.00098 Score=55.44 Aligned_cols=164 Identities=7% Similarity=0.066 Sum_probs=110.8
Q ss_pred CCCCCeEEEEEeCCCCEEEEEe-CCCcEEEEeCCCCceeEEeccC-------CCCeEEEEE---ccCCCEEEEEecC---
Q psy519 89 GHKQDVTCARFHPKITYIGTGS-YDKAVRLWSITDGASVRVFSDH-------VSPVLSIAF---SPCGKYLASGGTG--- 154 (351)
Q Consensus 89 ~~~~~i~~i~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~-------~~~i~~~~~---~~~~~~l~~~~~~--- 154 (351)
.......+++|++....++.++ ..++|..||...+......... ...+..+.| .|++.++++...+
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3344456789988656666655 7899999998755433332111 114579999 6887777754310
Q ss_pred -------CCCCeEEEEEcc---CCceeEEec--c-----------CCCCEEEEEECCCCcEEEEEcCC-CeEEEEEcCCC
Q psy519 155 -------SYDKAVRLWSIT---DGASVRVFS--D-----------HVSPVLSIAFSPCGKYLASGGED-GLVLTHELTTG 210 (351)
Q Consensus 155 -------~~d~~i~i~d~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~ 210 (351)
+.+..|..||+. +++.+.... . .......++..++|+..++++.. +.|...+...
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG- 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG- 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-
Confidence 115779999998 776655442 1 11247899999999999988888 8888777653
Q ss_pred cEEEEeeccC-----CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy519 211 RVISRFHLQE-----HEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 211 ~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
+....+.... ....+.++++|+|+.|++....|.+.-+|+...
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 3333332111 123679999999998888877999999998843
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.28 E-value=0.00046 Score=58.91 Aligned_cols=215 Identities=16% Similarity=0.134 Sum_probs=116.6
Q ss_pred cceEEEEECCCCcEEEEeCCCcEEEEeCCCCee--eEEe---eCCCCCeEEEEEeCC---CCEEEEEeC-C-----CcEE
Q psy519 51 MTVWSVEACSKGLALTGSRDTTARLWSLEQMYP--LRIF---VGHKQDVTCARFHPK---ITYIGTGSY-D-----KAVR 116 (351)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~--~~~~---~~~~~~i~~i~~~~~---~~~l~~~~~-d-----g~i~ 116 (351)
...+.++|.|+|.++.+..++.|++++ +++. +..+ .........++++|+ +..|+++.. . ..|.
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 346789999999997777789999998 3432 2111 122356789999998 455544433 2 6788
Q ss_pred EEeCCCCc-----ee-EEec---cCCCCeEEEEEccCCCEEEEEecC----------CCCCeEEEEEccCC---------
Q psy519 117 LWSITDGA-----SV-RVFS---DHVSPVLSIAFSPCGKYLASGGTG----------SYDKAVRLWSITDG--------- 168 (351)
Q Consensus 117 i~d~~~~~-----~~-~~~~---~~~~~i~~~~~~~~~~~l~~~~~~----------~~d~~i~i~d~~~~--------- 168 (351)
.++...+. .+ ..+. ........++|.|+|.+.++.+.. +..+.|.-+|....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 88876432 11 1122 111233679999999766664321 01256666665420
Q ss_pred -----ceeEEeccCCCCEEEEEECC-CCcEEEEEcCCCe--------EEEEEcCCCc------------------EEEEe
Q psy519 169 -----ASVRVFSDHVSPVLSIAFSP-CGKYLASGGEDGL--------VLTHELTTGR------------------VISRF 216 (351)
Q Consensus 169 -----~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~--------i~i~d~~~~~------------------~~~~~ 216 (351)
..+.. .++ .....++|+| ++.++++-..... |.+. ..+. ....+
T Consensus 189 ~~~~~~~i~a-~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 189 RRGARPEVYS-LGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp CTTSCTTEEE-ECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred CCCCCccEEE-EcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 11111 122 2356789999 6665554433222 3332 2221 11111
Q ss_pred eccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-------eee----eecceeEEecCCceee
Q psy519 217 HLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASK-------IGI----GVYPRCAAQPVGFEAA 274 (351)
Q Consensus 217 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~-------~~~----~~~~~~~~s~~~~~~~ 274 (351)
........++| .+|.++++.-..+.|...++..... ... ..+..+++.|||...+
T Consensus 265 --~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv 330 (352)
T 2ism_A 265 --PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYV 330 (352)
T ss_dssp --TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEE
T ss_pred --CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEE
Confidence 22335677777 4566666655567777777654321 000 2334567777775433
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.23 E-value=1.6e-05 Score=74.36 Aligned_cols=201 Identities=9% Similarity=0.011 Sum_probs=120.9
Q ss_pred cceEEeeecCCccccEEEEe-cCCCceEEEecCC----c-----cCCCccceEEEEECC-CCcE-EEEeCCCcEEEEeCC
Q psy519 12 KHFIQNSFKPETVEDVLANL-ESQKNLQSRYLPY----Y-----TSGHDMTVWSVEACS-KGLA-LTGSRDTTARLWSLE 79 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~-~~~~~i~i~~~~~----~-----~~~~~~~i~~~~~~~-~~~~-~~~~~d~~i~vw~~~ 79 (351)
..+..++|++. +..|..+ ...+.|+.+++.. . ..........+++.+ .+.+ ++-...+.|.++++.
T Consensus 406 ~~p~gla~d~~--~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETT--TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccc--cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 34567899987 6555544 4567899998875 1 111122345677774 3444 555667889999987
Q ss_pred CCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCC
Q psy519 80 QMYPLRIFVGHKQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 80 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d 157 (351)
.......+.........+++.|.+..|+.+.. .+.|..+++........+.........|+++|++..|+.+... .
T Consensus 484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~--~ 561 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK--L 561 (699)
T ss_dssp SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT--T
T ss_pred CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC--C
Confidence 65443333333345678899986665555443 2678888775433222222223445789999987777666542 6
Q ss_pred CeEEEEEccCCceeEEecc--CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEee
Q psy519 158 KAVRLWSITDGASVRVFSD--HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFH 217 (351)
Q Consensus 158 ~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 217 (351)
+.|..+|+........+.. .......|++..+ .++++....+.|..++..+++.+..+.
T Consensus 562 ~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 562 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp TEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred CeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 7899999864333322221 1122345566543 445555567889999988887776654
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.23 E-value=0.0016 Score=59.91 Aligned_cols=219 Identities=8% Similarity=-0.043 Sum_probs=128.0
Q ss_pred CCceEEEecCCc------cCCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCCCee-eEEeeCCCCCeEEEEEeCCCC
Q psy519 34 QKNLQSRYLPYY------TSGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQMYP-LRIFVGHKQDVTCARFHPKIT 104 (351)
Q Consensus 34 ~~~i~i~~~~~~------~~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~~~~-~~~~~~~~~~i~~i~~~~~~~ 104 (351)
...|+..++... ....-.....++|++.+ .+ .+-...+.|..++++.... ...+...-.....+++.+.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 456777776542 22234457789999855 44 4555578899999876532 223333335688999998555
Q ss_pred -EEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCCCCEEE
Q psy519 105 -YIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHVSPVLS 183 (351)
Q Consensus 105 -~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 183 (351)
++++-...+.|.+.++........+.........++++|.+..|+.+..+ ..+.|...++............-.....
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g-~~~~I~r~~~dG~~~~~l~~~~~~~P~G 175 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINSEIYWPNG 175 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccC-CCCEEEEEECCCCceEEEEeCCCCCCcE
Confidence 44555567899999987544333333344556789999987776666531 1467777787544333333333456789
Q ss_pred EEECCCCcEEEEE-cCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy519 184 IAFSPCGKYLASG-GEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 184 ~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 255 (351)
+++++++..|+.+ ...+.|..+|+.... ...+.........++++..+ .+..+-...+.|...|..+++.
T Consensus 176 lald~~~~~LY~aD~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 176 LTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EEEETTTTEEEEEETTTCCEEEESSSCCE-EC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred EEEEccCCEEEEEeCCCCeEEEecCCCCc-cEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 9999976555544 556789999886433 32221111223456777654 3334444567888888876654
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.20 E-value=0.0019 Score=55.01 Aligned_cols=216 Identities=13% Similarity=0.075 Sum_probs=121.1
Q ss_pred ceEEeeecCCccccEEEEecCCCceEEEecCCc------c---CCCccceEEEEECCC----CcE-EEEeCC-----CcE
Q psy519 13 HFIQNSFKPETVEDVLANLESQKNLQSRYLPYY------T---SGHDMTVWSVEACSK----GLA-LTGSRD-----TTA 73 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~------~---~~~~~~i~~~~~~~~----~~~-~~~~~d-----~~i 73 (351)
....++|.|+ |.++++ ...|.|++++ ... . .........++|+|+ +.+ ++-... +.|
T Consensus 32 ~P~~ia~~pd--G~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 32 VPWALAFLPD--GGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CEEEEEECTT--SCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CceEEEEcCC--CeEEEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4578999999 986665 4568898887 322 1 112356789999998 555 444432 678
Q ss_pred EEEeCCCCe-----ee-EEee---CCCCCeEEEEEeCCCCEEEEEeC-------------CCcEEEEeCCCC--------
Q psy519 74 RLWSLEQMY-----PL-RIFV---GHKQDVTCARFHPKITYIGTGSY-------------DKAVRLWSITDG-------- 123 (351)
Q Consensus 74 ~vw~~~~~~-----~~-~~~~---~~~~~i~~i~~~~~~~~l~~~~~-------------dg~i~i~d~~~~-------- 123 (351)
..++...++ .+ ..+. ........++|.|||.+.++.+. .|.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 888876431 11 1122 11122358999999976666432 245666665420
Q ss_pred ----ceeEEe-ccCCCCeEEEEEcc-CCCEEEEEecCCCCC-------eEEEEEccCCc------------------eeE
Q psy519 124 ----ASVRVF-SDHVSPVLSIAFSP-CGKYLASGGTGSYDK-------AVRLWSITDGA------------------SVR 172 (351)
Q Consensus 124 ----~~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~~~~d~-------~i~i~d~~~~~------------------~~~ 172 (351)
.....+ .++ .....++|+| ++.+++ +..+. +. .|.+. ..+. +..
T Consensus 188 ~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v-~d~g~-~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~ 262 (352)
T 2ism_A 188 GRRGARPEVYSLGH-RNPQGLAWHPKTGELFS-SEHGP-SGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPLY 262 (352)
T ss_dssp TCTTSCTTEEEECC-SEECCCEECTTTCCEEE-EEECC-------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred CCCCCCccEEEEcC-CCcccEEEECCCCCEEE-EEcCC-CCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCeE
Confidence 011111 122 3356789999 555444 43311 21 23332 2221 222
Q ss_pred EeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcE------EEEeeccCCCCEEEEEEcCCCCEEEEEe
Q psy519 173 VFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRV------ISRFHLQEHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 240 (351)
.+. +......++| .+|+++++.-..+.|...++..... ...+. .....+..+++.|||.+.++..
T Consensus 263 ~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 263 FWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp ECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECTTSCEEEEEC
T ss_pred ecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECCCCcEEEEEe
Confidence 332 2234567777 4677777766777888887764321 12221 2335789999999998766654
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.19 E-value=0.00098 Score=61.38 Aligned_cols=198 Identities=6% Similarity=-0.027 Sum_probs=120.8
Q ss_pred ccceEEeeecCCccccEEEEe-cCCCceEEEecCCc------cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCC
Q psy519 11 HKHFIQNSFKPETVEDVLANL-ESQKNLQSRYLPYY------TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQM 81 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~-~~~~~i~i~~~~~~------~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~ 81 (351)
-.....++|++. +..|..+ ...+.|..++++.. ..........+++.+. +++ ++-...+.|.+.+++..
T Consensus 39 ~~~~~~ld~~~~--~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 39 LEDAAAVDFVFS--HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CSCEEEEEEETT--TTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEEEeC--CCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 345788999997 5555544 44677888887653 1122246778999874 455 66667889999998765
Q ss_pred eeeEEeeCCCCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCe
Q psy519 82 YPLRIFVGHKQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKA 159 (351)
Q Consensus 82 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~ 159 (351)
.....+...-.....|++.|.+..|+.+.. .+.|...++..................+++++++..|+.+... .+.
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~--~~~ 194 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK--LNF 194 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETT--TCC
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCC--CCe
Confidence 433333334455778999997666655543 3677777776433333333344567899999988887777542 678
Q ss_pred EEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEE
Q psy519 160 VRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVI 213 (351)
Q Consensus 160 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 213 (351)
|..+|+..................+++..+ ..+++-...+.|...|..+++..
T Consensus 195 I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 195 IHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp EEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred EEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCccc
Confidence 999998654332222211222346677655 44445456778888888776543
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.18 E-value=0.0042 Score=57.30 Aligned_cols=223 Identities=6% Similarity=-0.095 Sum_probs=141.5
Q ss_pred cEEEEecCCCceEEEecCCc------cCCCccceEEEEECCCC-cE-EEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEE
Q psy519 26 DVLANLESQKNLQSRYLPYY------TSGHDMTVWSVEACSKG-LA-LTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCA 97 (351)
Q Consensus 26 ~~l~~~~~~~~i~i~~~~~~------~~~~~~~i~~~~~~~~~-~~-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i 97 (351)
.+|+.+ ....|+..++... ....-..+..++|.+.+ .+ .+-..++.|..+++........+.........+
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 455554 4567888888754 11123457789999854 44 666678899999987654433343333456789
Q ss_pred EEeCCCC-EEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEecc
Q psy519 98 RFHPKIT-YIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSD 176 (351)
Q Consensus 98 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 176 (351)
++.+.+. +.++-...+.|.+.++........+.........++++|....|+.+..+ ..+.|...++......... .
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~~~l~-~ 163 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSERTTLV-P 163 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEEE-C
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCceEEEE-C
Confidence 9987655 44555557889999987544333333344567899999976666665431 1467888887654433333 3
Q ss_pred CCCCEEEEEECCCCcEEEEE-cCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy519 177 HVSPVLSIAFSPCGKYLASG-GEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSAS 254 (351)
Q Consensus 177 ~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 254 (351)
.-.....++++++++.|+.+ ...+.|..+|+..... ..+. ........+++.. +.+.++-...+.|...|..+++
T Consensus 164 ~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~-~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIA-DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE-ECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEee-ccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 44567899999976665555 5567899999865433 2232 2234567888764 3444444457889988876654
No 302
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.15 E-value=0.00093 Score=55.54 Aligned_cols=222 Identities=11% Similarity=0.023 Sum_probs=116.4
Q ss_pred ccEEEEec-CC-----CceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCC-----CcEEEEeCCCCe---
Q psy519 25 EDVLANLE-SQ-----KNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRD-----TTARLWSLEQMY--- 82 (351)
Q Consensus 25 ~~~l~~~~-~~-----~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d-----~~i~vw~~~~~~--- 82 (351)
+.+++.|+ .+ ..+..||..+. .......- +++. .++.+ +.|+.+ ..+.+||+.+.+
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYV-ASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccc-cEEE-ECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 67778877 33 36788887766 11111111 1222 24555 777754 468999988755
Q ss_pred e--eEEeeCCCCCeEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCceeEE--eccCCCCeEEEEEccCCCEEEEEec
Q psy519 83 P--LRIFVGHKQDVTCARFHPKITYIGTGSYD-----KAVRLWSITDGASVRV--FSDHVSPVLSIAFSPCGKYLASGGT 153 (351)
Q Consensus 83 ~--~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~ 153 (351)
- +..+.........+.+ +++.++.|+.+ ..+.+||+.+.+.... +........++.+ ++++++.|+.
T Consensus 93 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 168 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGY 168 (301)
T ss_dssp CEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCC
Confidence 2 2222222222222322 56777777654 3688999887764332 2211122222223 6677777765
Q ss_pred CC--CCCeEEEEEccCCceeEE--eccCCCCEEEEEECCCCcEEEEEcCC-----CeEEEEEcCCCcEEEEeeccCCC-C
Q psy519 154 GS--YDKAVRLWSITDGASVRV--FSDHVSPVLSIAFSPCGKYLASGGED-----GLVLTHELTTGRVISRFHLQEHE-P 223 (351)
Q Consensus 154 ~~--~d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~-~ 223 (351)
.. ....+..||+.+.+=... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-...... .
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 11 125689999877632221 1111111222222 56777777653 46899999877544322222111 1
Q ss_pred EEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCcee
Q psy519 224 VTSLVWSVTGETLVTGSLT-----GTVQFYGWPSASKI 256 (351)
Q Consensus 224 v~~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~ 256 (351)
...+.+ ++++++.|+.+ ..+.+||.++.+-.
T Consensus 247 ~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 247 VGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp CEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred eeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 122222 56777777655 45788888776543
No 303
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.14 E-value=0.0029 Score=53.97 Aligned_cols=229 Identities=14% Similarity=0.070 Sum_probs=123.9
Q ss_pred cceEEeeecCCcccc-EEEEecCCCceEEEecCCcc-----------CCCccceEEEEECCC----CcE-EEEeC-----
Q psy519 12 KHFIQNSFKPETVED-VLANLESQKNLQSRYLPYYT-----------SGHDMTVWSVEACSK----GLA-LTGSR----- 69 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~~~~~-----------~~~~~~i~~~~~~~~----~~~-~~~~~----- 69 (351)
.....++|.|+ |+ ++++ ...|.|++++..... .........++++|+ +.+ ++-..
T Consensus 18 ~~P~~i~~~pd--G~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPD--NHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECST--TCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCC--CCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 34578999999 98 5554 567899988754321 112345689999995 655 44332
Q ss_pred --CCcEEEEeCCCC--e--eeE-EeeC------CCCCeEEEEEeCCCCEEEEEeC-------------CCcEEEEeCCCC
Q psy519 70 --DTTARLWSLEQM--Y--PLR-IFVG------HKQDVTCARFHPKITYIGTGSY-------------DKAVRLWSITDG 123 (351)
Q Consensus 70 --d~~i~vw~~~~~--~--~~~-~~~~------~~~~i~~i~~~~~~~~l~~~~~-------------dg~i~i~d~~~~ 123 (351)
...|..+++... + ... .+.. .......++|.|||.+.++.+. .|.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 235666666432 1 111 1111 1112357999999976665443 246777776532
Q ss_pred c------------eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCC-----------------------
Q psy519 124 A------------SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDG----------------------- 168 (351)
Q Consensus 124 ~------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~----------------------- 168 (351)
- ....+.........++|+|+...|.++..+. ++.=.|.-+..+
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~-~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP-RGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS-BSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC-CCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 0 1111211223467899999444455444311 111122111111
Q ss_pred --------ceeEEeccCCCCEEEEEECC-------CCcEEEEEcCCCeEEEEEcCCCcEEEEeec--cCCCCEEEEEEcC
Q psy519 169 --------ASVRVFSDHVSPVLSIAFSP-------CGKYLASGGEDGLVLTHELTTGRVISRFHL--QEHEPVTSLVWSV 231 (351)
Q Consensus 169 --------~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~ 231 (351)
..+..+.. ...+..+.|.+ +++++++.-..+.|...++..++......+ .....+..+++.|
T Consensus 254 ~~~~~~~~~P~~~~~~-~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKD-SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp BSSCTTSCCCSEEESS-CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCCccCCeEEeCC-CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 11122222 23566777764 467777777778888888876544332221 2235789999999
Q ss_pred CCCEEEEEe-CCCeE
Q psy519 232 TGETLVTGS-LTGTV 245 (351)
Q Consensus 232 ~~~~l~~~~-~dg~i 245 (351)
||.+.++.. .+|.|
T Consensus 333 dG~lyv~td~~~g~I 347 (353)
T 2g8s_A 333 DGYLYVLTDESSGEL 347 (353)
T ss_dssp TSCEEEEECSTTEEE
T ss_pred CCcEEEEEeCCCCEE
Confidence 998665433 34433
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.04 E-value=0.0037 Score=51.64 Aligned_cols=223 Identities=13% Similarity=0.145 Sum_probs=143.4
Q ss_pred CceEEEecCCccCC--CccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC
Q psy519 35 KNLQSRYLPYYTSG--HDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYD 112 (351)
Q Consensus 35 ~~i~i~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d 112 (351)
.+|.+.|+...... ..-.--+.-.+|..+.++--...++.++|+++.+.+..+.- .++|.-=+|-.+ +.|+..+ +
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALrag~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lVT-~ 125 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-D 125 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEEEEE-S
T ss_pred CEEEEEECCCCCCccccccccceeeeCCCccEEEEecCCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEEEEc-C
Confidence 46888888775111 11111234457888773333478999999999988887764 456777777644 4455444 5
Q ss_pred CcEEEEeCCC-CceeEEeccC----CCCeEEEEEccCCCEEEEEecC----CCCCeEEEEEccCCceeEEeccCCCCEEE
Q psy519 113 KAVRLWSITD-GASVRVFSDH----VSPVLSIAFSPCGKYLASGGTG----SYDKAVRLWSITDGASVRVFSDHVSPVLS 183 (351)
Q Consensus 113 g~i~i~d~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~----~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 183 (351)
..|+-|++.. ..+.+.+..| ...|.....+++.++++..+-. .-.|.+.+|..+. +.-+.+++|......
T Consensus 126 taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~ 204 (365)
T 2xzh_A 126 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQ 204 (365)
T ss_dssp SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEE
T ss_pred CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEE
Confidence 6899999974 3455555443 3577888889999998776531 1247899999754 445667777554433
Q ss_pred EEECCC---CcEEEEEcC---CCeEEEEEcCCC---c-----EEEEeeccC---CCCEEEEEEcCCCCEEEEEeCCCeEE
Q psy519 184 IAFSPC---GKYLASGGE---DGLVLTHELTTG---R-----VISRFHLQE---HEPVTSLVWSVTGETLVTGSLTGTVQ 246 (351)
Q Consensus 184 ~~~~~~---~~~l~~~~~---dg~i~i~d~~~~---~-----~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~ 246 (351)
+.+..+ .+.++.+.. .+.+++.++... . ....+..+. ..-..++..++....++.-+.-|.++
T Consensus 205 ~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ih 284 (365)
T 2xzh_A 205 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 284 (365)
T ss_dssp ECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEE
Confidence 333211 123333322 258888888432 1 111122222 24567888999888999999999999
Q ss_pred EEeCCCCceeeeeec
Q psy519 247 FYGWPSASKIGIGVY 261 (351)
Q Consensus 247 i~~~~~~~~~~~~~~ 261 (351)
+||++++..+...++
T Consensus 285 lyDleTgt~i~~nrI 299 (365)
T 2xzh_A 285 LYDLETGTCIYMNRI 299 (365)
T ss_dssp EEETTTCCEEEEEEC
T ss_pred EEEcccCcEEEEecc
Confidence 999999998876655
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.01 E-value=0.0092 Score=55.03 Aligned_cols=194 Identities=6% Similarity=-0.035 Sum_probs=126.5
Q ss_pred cceEEeeecCCccccEE-EEecCCCceEEEecCCc-----cCCCccceEEEEECCC-CcE-EEEeCCCcEEEEeCCCCee
Q psy519 12 KHFIQNSFKPETVEDVL-ANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSK-GLA-LTGSRDTTARLWSLEQMYP 83 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l-~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~-~~~-~~~~~d~~i~vw~~~~~~~ 83 (351)
..+..++|++. +..| ++-..++.|+.++++.. ..........+++.+. +++ ++-...+.|.+.+++....
T Consensus 37 ~~~~~l~~d~~--~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 37 KEASALDFDVT--DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp SCEEEEEEETT--TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred CceEEEEEECC--CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 46788999997 5555 45456788888887654 1112234567777654 445 6666778899999875443
Q ss_pred eEEeeCCCCCeEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEE
Q psy519 84 LRIFVGHKQDVTCARFHPKITYIGTGSY--DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVR 161 (351)
Q Consensus 84 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~ 161 (351)
...+...-.....+++.|....|+.+.. .+.|...++......... ........++++++++.|+.+... .+.|.
T Consensus 115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~--~~~I~ 191 (628)
T 4a0p_A 115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLD--TNLIE 191 (628)
T ss_dssp EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETT--TTEEE
T ss_pred EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECC--CCEEE
Confidence 3233334456789999996555555542 567888887654433333 344667899999988888877642 67899
Q ss_pred EEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcE
Q psy519 162 LWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRV 212 (351)
Q Consensus 162 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 212 (351)
.+|+..... ..+.........+++.. +.++++-...+.|...|..+++.
T Consensus 192 ~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 192 SSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred EEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 999865443 33333334556788764 45555555678888888766643
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.00 E-value=0.005 Score=52.20 Aligned_cols=192 Identities=17% Similarity=0.148 Sum_probs=113.6
Q ss_pred eEEEEECCCCcEEEEe-------------CCCcEEEEeCCC--Ceee-EEeeC-----CCCCeEEEEEeC--CCC-EEEE
Q psy519 53 VWSVEACSKGLALTGS-------------RDTTARLWSLEQ--MYPL-RIFVG-----HKQDVTCARFHP--KIT-YIGT 108 (351)
Q Consensus 53 i~~~~~~~~~~~~~~~-------------~d~~i~vw~~~~--~~~~-~~~~~-----~~~~i~~i~~~~--~~~-~l~~ 108 (351)
.-.++..|+|..++++ .+|.|.++|+++ .+.. ..+.+ .......+.+.+ ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4456677888775554 689999999873 2221 12222 223667787766 343 4444
Q ss_pred EeC---CCcEEEEeCCCCc----eeEEecc-CCCCeEEEEEccCCCEEEEEec--------------CCCCCeEEEEEcc
Q psy519 109 GSY---DKAVRLWSITDGA----SVRVFSD-HVSPVLSIAFSPCGKYLASGGT--------------GSYDKAVRLWSIT 166 (351)
Q Consensus 109 ~~~---dg~i~i~d~~~~~----~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~--------------~~~d~~i~i~d~~ 166 (351)
+.. +.++.+|++.... .+..+.+ .-.....+++.++|.+.++... +...+.|.-+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 432 4567777765432 2223332 2245789999999987776531 011355666664
Q ss_pred CCceeEEeccCCCCEEEEEECCCCcEEEEEc-CCCeEEEEEcCC-CcEE--EEeeccCCCCEEEEEEcC-CCCEEEEEeC
Q psy519 167 DGASVRVFSDHVSPVLSIAFSPCGKYLASGG-EDGLVLTHELTT-GRVI--SRFHLQEHEPVTSLVWSV-TGETLVTGSL 241 (351)
Q Consensus 167 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 241 (351)
++ +..+...-...+.++|+||++.|+.+. ..+.|..|++.. +... ..+ ........+++.+ +|++.+++..
T Consensus 211 -~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 211 -ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp -TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEECTTTCCEEEEEES
T ss_pred -Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEEeCCCCcEEEEecC
Confidence 33 222222234568999999998777654 578899999863 3322 223 2245678899999 5987776654
Q ss_pred C-CeEEEEe
Q psy519 242 T-GTVQFYG 249 (351)
Q Consensus 242 d-g~i~i~~ 249 (351)
+ +.|..|+
T Consensus 287 ~g~~v~~~~ 295 (355)
T 3sre_A 287 NGMRIFFYD 295 (355)
T ss_dssp CHHHHHSCC
T ss_pred CceEEEEEC
Confidence 4 3444444
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.99 E-value=0.0028 Score=52.68 Aligned_cols=222 Identities=15% Similarity=0.100 Sum_probs=113.6
Q ss_pred ccEEEEecCC----CceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCC-----CcEEEEeCCCCeeeEE-
Q psy519 25 EDVLANLESQ----KNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRD-----TTARLWSLEQMYPLRI- 86 (351)
Q Consensus 25 ~~~l~~~~~~----~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d-----~~i~vw~~~~~~~~~~- 86 (351)
+.+++.|+.+ ..+..||.... .......- +++.. ++.+ +.|+.+ ..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 5677777653 35777887765 11111111 12222 4555 777654 3588899887653322
Q ss_pred -eeCCCCCeEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCCceeEEe--ccCCCCeEEEEEccCCCEEEEEecCCC--
Q psy519 87 -FVGHKQDVTCARFHPKITYIGTGSYDK-----AVRLWSITDGASVRVF--SDHVSPVLSIAFSPCGKYLASGGTGSY-- 156 (351)
Q Consensus 87 -~~~~~~~i~~i~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~~-- 156 (351)
+.........+.+ ++..++.|+.++ .+.+||+.+.+....- .........+.+ ++++++.|+....
T Consensus 94 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 94 NMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASR 169 (302)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTT
T ss_pred CCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCC
Confidence 2111222222222 567777777553 5888998877644332 111112222222 5667777664211
Q ss_pred --CCeEEEEEccCCceeE--EeccCCCCEEEEEECCCCcEEEEEcCC-----CeEEEEEcCCCcEEEEeeccCCCCEEEE
Q psy519 157 --DKAVRLWSITDGASVR--VFSDHVSPVLSIAFSPCGKYLASGGED-----GLVLTHELTTGRVISRFHLQEHEPVTSL 227 (351)
Q Consensus 157 --d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~~~ 227 (351)
-..+.+||+.+.+=.. .+.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-.......-.++
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV 247 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred ccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeE
Confidence 2458899987763221 11111111222222 57777777654 3688999987654432221111111122
Q ss_pred EEcCCCCEEEEEeCCC-----eEEEEeCCCCce
Q psy519 228 VWSVTGETLVTGSLTG-----TVQFYGWPSASK 255 (351)
Q Consensus 228 ~~~~~~~~l~~~~~dg-----~i~i~~~~~~~~ 255 (351)
+. .++++++.|+.++ .+.+||..+.+-
T Consensus 248 ~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 248 CA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EE-ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EE-ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 22 2567777776543 478888876643
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.98 E-value=0.0048 Score=51.29 Aligned_cols=222 Identities=8% Similarity=-0.014 Sum_probs=116.5
Q ss_pred ccEEEEecC--CCceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeCC----CcEEEEeCCCCeeeEE--ee
Q psy519 25 EDVLANLES--QKNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSRD----TTARLWSLEQMYPLRI--FV 88 (351)
Q Consensus 25 ~~~l~~~~~--~~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~d----~~i~vw~~~~~~~~~~--~~ 88 (351)
+.+++.|+. ...+..||.... .......-..+.+ ++.+ +.|+.+ ..+.+||+.+.+-... +.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345666664 356788888776 1111111112222 4555 777754 6788999987653322 22
Q ss_pred CCCCCeEEEEEeCCCCEEEEEeCC------CcEEEEeCCCCceeEEec--cCCCCeEEEEEccCCCEEEEEecCCC----
Q psy519 89 GHKQDVTCARFHPKITYIGTGSYD------KAVRLWSITDGASVRVFS--DHVSPVLSIAFSPCGKYLASGGTGSY---- 156 (351)
Q Consensus 89 ~~~~~i~~i~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~---- 156 (351)
........+.+ ++++++.|+.+ ..+.+||+.+.+....-. ........+.+ ++++++.|+....
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTC
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcc
Confidence 12222222222 56777777755 468999998876433321 11111222222 6667777764211
Q ss_pred --CCeEEEEEccCCceeEEecc---CCCCEEEEEECCCCcEEEEEcCC-----CeEEEEEcCCCcEEEEeeccCC-CCEE
Q psy519 157 --DKAVRLWSITDGASVRVFSD---HVSPVLSIAFSPCGKYLASGGED-----GLVLTHELTTGRVISRFHLQEH-EPVT 225 (351)
Q Consensus 157 --d~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~-~~v~ 225 (351)
-..+.+||+.+.+= ..+.. .......+.+ ++++++.|+.+ ..+.+||+.+.+-...-..... ....
T Consensus 166 ~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 242 (306)
T 3ii7_A 166 RVLNSCEVYDPATETW-TELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVK 242 (306)
T ss_dssp EECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCE
T ss_pred cccceEEEeCCCCCeE-EECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcccee
Confidence 24588999877632 22211 1111122222 56777776643 3588999987653322111111 1222
Q ss_pred EEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceee
Q psy519 226 SLVWSVTGETLVTGSLT-----GTVQFYGWPSASKIG 257 (351)
Q Consensus 226 ~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~ 257 (351)
.+.+ ++++++.|+.+ ..+.+||..+.+-..
T Consensus 243 ~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 243 CAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWVA 277 (306)
T ss_dssp EEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEEE
T ss_pred EEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEe
Confidence 2333 66777777744 568888888765433
No 309
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.96 E-value=0.0019 Score=55.42 Aligned_cols=145 Identities=15% Similarity=0.148 Sum_probs=99.2
Q ss_pred EeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccC----CCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc-----
Q psy519 99 FHPKITYIGTGSYDKAVRLWSITDGASVRVFSDH----VSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA----- 169 (351)
Q Consensus 99 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~----- 169 (351)
...++..++.+- ++.||.-++......+.+... ...+..+..+|+|++||..+ +..|.+..+..+.
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g----~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN----DNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC----SSEEEEEECCTTCSCCCC
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec----CCeEEEEEecCccccCcc
Confidence 344666666554 578888888755555555432 23678899999999999987 6789998886321
Q ss_pred -------eeEEecc------CCCCEEEEEECC---CCcEEEEEcCCCeEEEEEcCCCcE-EEEeecc--------CCCCE
Q psy519 170 -------SVRVFSD------HVSPVLSIAFSP---CGKYLASGGEDGLVLTHELTTGRV-ISRFHLQ--------EHEPV 224 (351)
Q Consensus 170 -------~~~~~~~------~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~--------~~~~v 224 (351)
..+.+.- ...+|..+.|+| .+..|++-..|+.|++||+..... ...+... ....+
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence 1122221 256899999999 456899999999999999985321 1122111 11568
Q ss_pred EEEEEcCCCCEEEEEe--CCCeEEEE
Q psy519 225 TSLVWSVTGETLVTGS--LTGTVQFY 248 (351)
Q Consensus 225 ~~~~~~~~~~~l~~~~--~dg~i~i~ 248 (351)
.+++|.+++-.|...+ ..|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999887777755 77888665
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.96 E-value=0.0015 Score=55.40 Aligned_cols=187 Identities=13% Similarity=0.105 Sum_probs=111.8
Q ss_pred eEEeeecCCccccEEEEe------------cCCCceEEEecCCc--------cCC-----CccceEEEEECC--CCc--E
Q psy519 14 FIQNSFKPETVEDVLANL------------ESQKNLQSRYLPYY--------TSG-----HDMTVWSVEACS--KGL--A 64 (351)
Q Consensus 14 v~~~~~sp~~~~~~l~~~------------~~~~~i~i~~~~~~--------~~~-----~~~~i~~~~~~~--~~~--~ 64 (351)
.-.++..|+ |..+++. ..+|.|.++|..+. ..+ .......+.+.+ ++. +
T Consensus 52 ~EDi~~~~~--G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 52 SEDLEILPN--GLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCEEEECTT--SEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred cceeEEcCC--CeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 345567788 7666665 26899999998742 111 234566777654 353 3
Q ss_pred -EEEeC--CCcEEEEeCCCC--e--eeEEeeCC-CCCeEEEEEeCCCCEEEEEeC-----------------CCcEEEEe
Q psy519 65 -LTGSR--DTTARLWSLEQM--Y--PLRIFVGH-KQDVTCARFHPKITYIGTGSY-----------------DKAVRLWS 119 (351)
Q Consensus 65 -~~~~~--d~~i~vw~~~~~--~--~~~~~~~~-~~~i~~i~~~~~~~~l~~~~~-----------------dg~i~i~d 119 (351)
++-.. +.++.+|+++.. . .+..+.+. -...+.+.+.++|.+.++... .|.++-+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 33222 467777776542 2 22233322 245789999999987776541 24566666
Q ss_pred CCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC-Cce--eEEeccCCCCEEEEEECC-CCcEEEE
Q psy519 120 ITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD-GAS--VRVFSDHVSPVLSIAFSP-CGKYLAS 195 (351)
Q Consensus 120 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~~~-~~~~l~~ 195 (351)
. ++ +..+...-.....++|+||++.++++... .+.|..||+.. ++. .+.+ ...+..-.+++.+ +|++.++
T Consensus 210 ~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~--~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 210 P--ND-VRVVAEGFDFANGINISPDGKYVYIAELL--AHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp T--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred C--Ce-EEEeecCCcccCcceECCCCCEEEEEeCC--CCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence 4 33 22332233556889999999988887642 68899999864 322 2233 2345567889998 5887776
Q ss_pred EcCC-CeEEEEEcC
Q psy519 196 GGED-GLVLTHELT 208 (351)
Q Consensus 196 ~~~d-g~i~i~d~~ 208 (351)
+..+ +.|..|+..
T Consensus 284 ~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 284 CHPNGMRIFFYDAE 297 (355)
T ss_dssp EESCHHHHHSCCTT
T ss_pred ecCCceEEEEECCC
Confidence 6533 344445543
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.88 E-value=0.0091 Score=50.86 Aligned_cols=219 Identities=13% Similarity=0.064 Sum_probs=122.7
Q ss_pred cceEEEEECCCCcEEEEeCCCcEEEEeCCCCe-eeEEe---eCCCCCeEEEEEeCC---CCEEEEEeC----C----CcE
Q psy519 51 MTVWSVEACSKGLALTGSRDTTARLWSLEQMY-PLRIF---VGHKQDVTCARFHPK---ITYIGTGSY----D----KAV 115 (351)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~-~~~~~---~~~~~~i~~i~~~~~---~~~l~~~~~----d----g~i 115 (351)
...+.++|.|+|.++.+..++.|++++. +++ .+..+ .........|+++|+ +..|+++.. + ..|
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3567899999999977778899999973 444 22221 122346889999997 445544432 2 567
Q ss_pred EEEeCCCC--c-----ee-EEecc-CCCCeEEEEEccCCCEEEEEecC----------CCCCeEEEEEccCC--------
Q psy519 116 RLWSITDG--A-----SV-RVFSD-HVSPVLSIAFSPCGKYLASGGTG----------SYDKAVRLWSITDG-------- 168 (351)
Q Consensus 116 ~i~d~~~~--~-----~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~~----------~~d~~i~i~d~~~~-------- 168 (351)
..|+.... . .+ ..+.. .......++|.|+|.++++.+.. ...+.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 77876643 1 11 11221 11234579999999877764321 01245666665321
Q ss_pred -ceeEEeccCCCCEEEEEECC-CCcEEEEEcCCC---eEEEEEcCCCc------------------EEEEeeccCCCCEE
Q psy519 169 -ASVRVFSDHVSPVLSIAFSP-CGKYLASGGEDG---LVLTHELTTGR------------------VISRFHLQEHEPVT 225 (351)
Q Consensus 169 -~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg---~i~i~d~~~~~------------------~~~~~~~~~~~~v~ 225 (351)
..+.. .++.. ...++|+| ++.++++-...+ .|.+.. .+. .+..+. .....+.
T Consensus 188 ~~~i~a-~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~~ap~ 262 (354)
T 3a9g_A 188 NSPIWS-YGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG-SETWAPS 262 (354)
T ss_dssp TCCEEE-ECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCCEE
T ss_pred CCcEEE-EccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC-CCCcCCc
Confidence 11221 23333 45799999 666555543322 243332 111 111110 2234678
Q ss_pred EEEEc-------CCCCEEEEEeCCCeEEEEeCCCC-ceeee--------eecceeEEecCCceeee
Q psy519 226 SLVWS-------VTGETLVTGSLTGTVQFYGWPSA-SKIGI--------GVYPRCAAQPVGFEAAT 275 (351)
Q Consensus 226 ~~~~~-------~~~~~l~~~~~dg~i~i~~~~~~-~~~~~--------~~~~~~~~s~~~~~~~~ 275 (351)
.++|. .+|.++++.-..+.|...++... +.... ..+..+++.|||...++
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~ 328 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIS 328 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEE
Confidence 88884 46777776666788988888753 22111 23456778888854433
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.85 E-value=0.0086 Score=49.59 Aligned_cols=180 Identities=12% Similarity=0.072 Sum_probs=95.6
Q ss_pred CcEEEEeCCCCeeeEE--eeCCCCCeEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCc---eeEEe--ccCCCCeEE
Q psy519 71 TTARLWSLEQMYPLRI--FVGHKQDVTCARFHPKITYIGTGSYD-----KAVRLWSITDGA---SVRVF--SDHVSPVLS 138 (351)
Q Consensus 71 ~~i~vw~~~~~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~---~~~~~--~~~~~~i~~ 138 (351)
..+.+||+.+.+-... +.........+. .++..++.|+.+ ..+.+||+.+.+ ....- .........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 4688999887653321 111112222222 256677777754 469999998776 33321 111122222
Q ss_pred EEEccCCCEEEEEecCCC--CCeEEEEEccCCc--eeEEeccCCCCEEEEEECCCCcEEEEEcCC-----CeEEEEEcCC
Q psy519 139 IAFSPCGKYLASGGTGSY--DKAVRLWSITDGA--SVRVFSDHVSPVLSIAFSPCGKYLASGGED-----GLVLTHELTT 209 (351)
Q Consensus 139 ~~~~~~~~~l~~~~~~~~--d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 209 (351)
+.+ ++.+++.|+.... ...+.+||+.+.+ .+..+.........+.+ ++++++.|+.+ ..+.+||+.+
T Consensus 109 ~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 109 TTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp EEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCC
Confidence 233 5677777764211 2468899987754 22222211112222222 67777777654 4588999887
Q ss_pred CcEEEEeeccCCC-CEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeee
Q psy519 210 GRVISRFHLQEHE-PVTSLVWSVTGETLVTGSLT-----GTVQFYGWPSASKIGI 258 (351)
Q Consensus 210 ~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~ 258 (351)
.+-...-...... ....+.+ ++++++.|+.+ ..+.+||..+.+-...
T Consensus 185 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 237 (301)
T 2vpj_A 185 GHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV 237 (301)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEEC
Confidence 6544322212211 1122222 56777777654 4689999988765443
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.81 E-value=0.013 Score=50.47 Aligned_cols=225 Identities=13% Similarity=0.151 Sum_probs=145.8
Q ss_pred CCceEEEecCCccCC--CccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeC
Q psy519 34 QKNLQSRYLPYYTSG--HDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSY 111 (351)
Q Consensus 34 ~~~i~i~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 111 (351)
..+|.|.|+...... ..-.--+.-.+|..+.++--...++.|+|+++.+.+..+.-. ++|.-=.|-.+ +.|+..+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~-e~VvfWkWis~-~~l~lVT- 123 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISL-NTVALVT- 123 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECS-SCCCEEEEEET-TEEEEEC-
T ss_pred CCeEEEEECCCCCcceecccccceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecC-CCceEEEecCC-CeEEEEc-
Confidence 347888888765111 111112345678777743334789999999999888877644 45656667543 3455444
Q ss_pred CCcEEEEeCCC-CceeEEeccC----CCCeEEEEEccCCCEEEEEecC----CCCCeEEEEEccCCceeEEeccCCCCEE
Q psy519 112 DKAVRLWSITD-GASVRVFSDH----VSPVLSIAFSPCGKYLASGGTG----SYDKAVRLWSITDGASVRVFSDHVSPVL 182 (351)
Q Consensus 112 dg~i~i~d~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~----~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 182 (351)
+..|+-|++.. ..+.+.+..| ...|.....+++.++++..+-. ...|.+.+|..+.+ .-+.+++|.....
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~ 202 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFA 202 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeE
Confidence 57899999974 3455666443 3577888889999998866531 12578999997544 4566777765554
Q ss_pred EEEECCCC---cEEEEEcC---CCeEEEEEcCCC--------cEEEEeeccC---CCCEEEEEEcCCCCEEEEEeCCCeE
Q psy519 183 SIAFSPCG---KYLASGGE---DGLVLTHELTTG--------RVISRFHLQE---HEPVTSLVWSVTGETLVTGSLTGTV 245 (351)
Q Consensus 183 ~~~~~~~~---~~l~~~~~---dg~i~i~d~~~~--------~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i 245 (351)
.+.+..+. ..+..+.. .+.+++.++... +....+..+. ..-..++..++....+..-+.-|.+
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i 282 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceE
Confidence 44443211 23444433 378999988532 1111222222 2457788999988899999999999
Q ss_pred EEEeCCCCceeeeeecc
Q psy519 246 QFYGWPSASKIGIGVYP 262 (351)
Q Consensus 246 ~i~~~~~~~~~~~~~~~ 262 (351)
++||++++..+...++.
T Consensus 283 ~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 283 HLYDLETGTCIYMNRIS 299 (494)
T ss_dssp EEEETTTCCEEEEEECC
T ss_pred EEEecccceeeeeeccc
Confidence 99999999988776553
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.77 E-value=0.012 Score=48.76 Aligned_cols=233 Identities=14% Similarity=0.092 Sum_probs=148.4
Q ss_pred eeecCCccccEEEEecCCCceEEEecCCc--cCC--CccceEEEEECCCCcEEEEeCCCcEEEEeCCC-CeeeEEeeCCC
Q psy519 17 NSFKPETVEDVLANLESQKNLQSRYLPYY--TSG--HDMTVWSVEACSKGLALTGSRDTTARLWSLEQ-MYPLRIFVGHK 91 (351)
Q Consensus 17 ~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--~~~--~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~-~~~~~~~~~~~ 91 (351)
...+|. .+.||.-. ...++++|++.. +.. ....|.--.|-.+..++..+ +..|+-|+++. ..+.+.+..|.
T Consensus 72 AIMnP~--~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 72 AIMNPA--SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEECSS--SSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeCCC--ccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 566888 88887764 678999999987 222 24577777888887773322 36899999974 35666665543
Q ss_pred ----CCeEEEEEeCCCCEEEEEeC-------CCcEEEEeCCCCceeEEeccCCCCeEEEEEcc--C-CCEEEEEecCCCC
Q psy519 92 ----QDVTCARFHPKITYIGTGSY-------DKAVRLWSITDGASVRVFSDHVSPVLSIAFSP--C-GKYLASGGTGSYD 157 (351)
Q Consensus 92 ----~~i~~i~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~l~~~~~~~~d 157 (351)
..|..-..+++.+.++..+- .|.+.+|..+. +..+.+.+|...-..+.+.- . .+.++.+......
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 46667777888887765442 37889999764 34566666644333222211 1 1244444432223
Q ss_pred CeEEEEEccCC---c-----eeEE-ecc---CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEE
Q psy519 158 KAVRLWSITDG---A-----SVRV-FSD---HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVT 225 (351)
Q Consensus 158 ~~i~i~d~~~~---~-----~~~~-~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 225 (351)
+.+++.++... . .... +-. ...-..++..++.-..++.-+.-|.+++||+.++.++..-+... .+|-
T Consensus 227 ~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~-d~iF 305 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIF 305 (365)
T ss_dssp EEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEE
T ss_pred cEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC-CceE
Confidence 68999998432 1 1111 111 23345578888877788888899999999999999998776543 4555
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy519 226 SLVWSVTGETLVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 226 ~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 255 (351)
.-+.+....-++.....|.|.--.++..+.
T Consensus 306 ~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 306 VTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 445544444455555788877766665543
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.73 E-value=0.0049 Score=52.91 Aligned_cols=142 Identities=14% Similarity=0.136 Sum_probs=93.2
Q ss_pred CCCcEEEEeCCCcEEEEeCCCCeeeEEeeCC----CCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc-----------
Q psy519 60 SKGLALTGSRDTTARLWSLEQMYPLRIFVGH----KQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA----------- 124 (351)
Q Consensus 60 ~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~----~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~----------- 124 (351)
.+|.-+....++.||.-++......+.+... -..+..+..+|+|++|+..+ +..|.+..+..+.
T Consensus 30 ~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 30 QNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred cCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 3444434444577777777644344444432 22577899999999999876 5689998887322
Q ss_pred -eeEEecc------CCCCeEEEEEccC---CCEEEEEecCCCCCeEEEEEccCCc-eeEEec---------cCCCCEEEE
Q psy519 125 -SVRVFSD------HVSPVLSIAFSPC---GKYLASGGTGSYDKAVRLWSITDGA-SVRVFS---------DHVSPVLSI 184 (351)
Q Consensus 125 -~~~~~~~------~~~~i~~~~~~~~---~~~l~~~~~~~~d~~i~i~d~~~~~-~~~~~~---------~~~~~i~~~ 184 (351)
..+.+.- ...+|..+.|+|- +..|++-.. |+.|++||+.... ....++ .....+.++
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts---D~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE---DDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET---TSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEec---CCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 1112211 2478999999994 457777777 9999999998631 111221 233578899
Q ss_pred EECCCCcEEEEEc--CCCeEEEE
Q psy519 185 AFSPCGKYLASGG--EDGLVLTH 205 (351)
Q Consensus 185 ~~~~~~~~l~~~~--~dg~i~i~ 205 (351)
+|.+++-.|++.+ ++|.|+-.
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEEE
Confidence 9999887777754 78887654
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.70 E-value=0.015 Score=48.11 Aligned_cols=187 Identities=14% Similarity=0.135 Sum_probs=96.0
Q ss_pred EEEeCC----CcEEEEeCCCCeeeEE--eeCCCCCeEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCceeEEec--c
Q psy519 65 LTGSRD----TTARLWSLEQMYPLRI--FVGHKQDVTCARFHPKITYIGTGSYD-----KAVRLWSITDGASVRVFS--D 131 (351)
Q Consensus 65 ~~~~~d----~~i~vw~~~~~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~--~ 131 (351)
+.|+.+ ..+..||+.+.+-... +.........+.+ ++..++.|+.+ ..+..||..+.+....-. .
T Consensus 20 v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 97 (302)
T 2xn4_A 20 VVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD 97 (302)
T ss_dssp EECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred EECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc
Confidence 555543 4588889887653322 1111112222222 56677777754 358899988776433221 1
Q ss_pred CCCCeEEEEEccCCCEEEEEecCCC--CCeEEEEEccCCceeEE--eccCCCCEEEEEECCCCcEEEEEcCC-------C
Q psy519 132 HVSPVLSIAFSPCGKYLASGGTGSY--DKAVRLWSITDGASVRV--FSDHVSPVLSIAFSPCGKYLASGGED-------G 200 (351)
Q Consensus 132 ~~~~i~~~~~~~~~~~l~~~~~~~~--d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-------g 200 (351)
.......+.+ ++.+++.|+.... -..+.+||+.+.+=... +.........+.+ ++++++.|+.+ .
T Consensus 98 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 98 RRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp CCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECC
T ss_pred cccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCcccc
Confidence 1112222223 5677777775110 13588899876542221 1111111122222 56777766542 3
Q ss_pred eEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeee
Q psy519 201 LVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLT-----GTVQFYGWPSASKIGI 258 (351)
Q Consensus 201 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~ 258 (351)
.+.+||+.+.+-...-.......-.+++. -++++++.|+.+ ..+.+||..+.+-...
T Consensus 174 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 235 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV 235 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeC
Confidence 58899998765443222121111112222 256777777654 4689999988755443
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.70 E-value=0.0069 Score=50.61 Aligned_cols=220 Identities=10% Similarity=-0.024 Sum_probs=108.3
Q ss_pred EEEEecCCCceEEEecCCc------cCCCccceEEEEECCCCcE-EEEeC-----C------CcEEEEeCCCCeeeEE--
Q psy519 27 VLANLESQKNLQSRYLPYY------TSGHDMTVWSVEACSKGLA-LTGSR-----D------TTARLWSLEQMYPLRI-- 86 (351)
Q Consensus 27 ~l~~~~~~~~i~i~~~~~~------~~~~~~~i~~~~~~~~~~~-~~~~~-----d------~~i~vw~~~~~~~~~~-- 86 (351)
+++.|+ ..+..||..+. ...............++.+ +.|+. . ..+.+||+.+.+-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 445555 46888888776 1111112222223345555 77773 1 1277889887653221
Q ss_pred eeCCCCCeEEEEEeCCCCEEEEEeCC--------CcEEEEeCCCCceeEEe--ccCCCCeEEEEEccCCCEEEEEecCC-
Q psy519 87 FVGHKQDVTCARFHPKITYIGTGSYD--------KAVRLWSITDGASVRVF--SDHVSPVLSIAFSPCGKYLASGGTGS- 155 (351)
Q Consensus 87 ~~~~~~~i~~i~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~- 155 (351)
+.........+.+ ++..++.|+.+ ..+.+||+.+.+-...- .........+. .++++++.|+...
T Consensus 85 ~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 85 LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSD 160 (315)
T ss_dssp BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTT
T ss_pred CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCC
Confidence 1111111122222 56677777632 46899999877543221 11111122222 3566777776411
Q ss_pred --CCCeEEEEEccCCce--eEEeccCCCCEEEEEECCCCcEEEEEcCCC-----eEEEEEcCCCcEEEEeeccCCCCEEE
Q psy519 156 --YDKAVRLWSITDGAS--VRVFSDHVSPVLSIAFSPCGKYLASGGEDG-----LVLTHELTTGRVISRFHLQEHEPVTS 226 (351)
Q Consensus 156 --~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~v~~ 226 (351)
.-..+.+||+.+.+= +..+.........+.+ ++++++.|+.++ .+.+||+.+.+-...-.......-.+
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 238 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLS 238 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccccee
Confidence 124689999876531 1111111111222222 667777776543 58889988765443222121111112
Q ss_pred EEEcCCCCEEEEEeCC--------------CeEEEEeCCCCce
Q psy519 227 LVWSVTGETLVTGSLT--------------GTVQFYGWPSASK 255 (351)
Q Consensus 227 ~~~~~~~~~l~~~~~d--------------g~i~i~~~~~~~~ 255 (351)
++. -++++++.|+.+ ..+.+||..+.+-
T Consensus 239 ~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 239 LVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred EEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 222 256667777653 2366777776543
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.69 E-value=0.012 Score=48.91 Aligned_cols=224 Identities=11% Similarity=-0.005 Sum_probs=115.2
Q ss_pred ccEEEEecCC----CceEEEecCCc-------cCCCccceEEEEECCCCcE-EEEeC----C-----CcEEEEeCCCCee
Q psy519 25 EDVLANLESQ----KNLQSRYLPYY-------TSGHDMTVWSVEACSKGLA-LTGSR----D-----TTARLWSLEQMYP 83 (351)
Q Consensus 25 ~~~l~~~~~~----~~i~i~~~~~~-------~~~~~~~i~~~~~~~~~~~-~~~~~----d-----~~i~vw~~~~~~~ 83 (351)
+.+++.|+.+ ..+.+||.... .......- +++.. ++.+ +.|+. + ..+.+||+.+.+-
T Consensus 25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 6777887742 36788887765 11111111 22222 4555 66665 2 4688999887653
Q ss_pred eEE--eeCCCCCeEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCceeEEe--ccCCCCeEEEEEccCCCEEEEEecC
Q psy519 84 LRI--FVGHKQDVTCARFHPKITYIGTGSYD-----KAVRLWSITDGASVRVF--SDHVSPVLSIAFSPCGKYLASGGTG 154 (351)
Q Consensus 84 ~~~--~~~~~~~i~~i~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~ 154 (351)
... +.........+.+ +++.++.|+.+ ..+..||+.+.+....- ......-..+.+ ++.+++.|+..
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCC
Confidence 322 1111222222333 56777776643 46889998876543321 111112222333 56777777652
Q ss_pred CC--CCeEEEEEccCCceeE--EeccCCCCEEEEEECCCCcEEEEEcCC-----CeEEEEEcCCCcEEEEeeccCCCCEE
Q psy519 155 SY--DKAVRLWSITDGASVR--VFSDHVSPVLSIAFSPCGKYLASGGED-----GLVLTHELTTGRVISRFHLQEHEPVT 225 (351)
Q Consensus 155 ~~--d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~ 225 (351)
.. ...+.+||+.+.+=.. .+.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-.......-.
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 256 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL 256 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce
Confidence 11 2468999987653111 11111111222333 67777777654 46899999876543321111111111
Q ss_pred EEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceee
Q psy519 226 SLVWSVTGETLVTGSLT-----GTVQFYGWPSASKIG 257 (351)
Q Consensus 226 ~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~ 257 (351)
+++. -++++++.|+.+ ..+.+||..+.+-..
T Consensus 257 ~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 257 GITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred EEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 2222 256777777643 467888887765443
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.68 E-value=0.02 Score=48.76 Aligned_cols=220 Identities=12% Similarity=0.076 Sum_probs=116.5
Q ss_pred ceEEEEECCCCc-EEEEeCCCcEEEEeCCCCeeeEEe-------eCCCCCeEEEEEeCC---CCEEEEEe-C-------C
Q psy519 52 TVWSVEACSKGL-ALTGSRDTTARLWSLEQMYPLRIF-------VGHKQDVTCARFHPK---ITYIGTGS-Y-------D 112 (351)
Q Consensus 52 ~i~~~~~~~~~~-~~~~~~d~~i~vw~~~~~~~~~~~-------~~~~~~i~~i~~~~~---~~~l~~~~-~-------d 112 (351)
..+.|+|.|+|+ ++.+...+.|++++.. ++....+ .........++++|+ +..|+.+. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 467899999999 8777788999999854 3321111 122345789999995 44444432 2 2
Q ss_pred CcEEEEeCCCC--c--eeE-Eecc------CCCCeEEEEEccCCCEEEEEecC----------CCCCeEEEEEccCCc--
Q psy519 113 KAVRLWSITDG--A--SVR-VFSD------HVSPVLSIAFSPCGKYLASGGTG----------SYDKAVRLWSITDGA-- 169 (351)
Q Consensus 113 g~i~i~d~~~~--~--~~~-~~~~------~~~~i~~~~~~~~~~~l~~~~~~----------~~d~~i~i~d~~~~~-- 169 (351)
..|..+++... . ... .+.. .......++|.|||.+.++.+.. ...+.|.-+|....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666666432 1 111 1111 11123579999999666654331 012467666754320
Q ss_pred ----------eeEEec-cCCCCEEEEEECC-CCcEEEEEcC-CCeEEEEEcCCCcE------------------------
Q psy519 170 ----------SVRVFS-DHVSPVLSIAFSP-CGKYLASGGE-DGLVLTHELTTGRV------------------------ 212 (351)
Q Consensus 170 ----------~~~~~~-~~~~~i~~~~~~~-~~~~l~~~~~-dg~i~i~d~~~~~~------------------------ 212 (351)
....+. ++ .....++|+| ++.++++-.. ++.=.|.-+..+..
T Consensus 178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 111111 23 3467899999 5655444221 11111211111110
Q ss_pred -----EEEeeccCCCCEEEEEEcC-------CCCEEEEEeCCCeEEEEeCCCCceeee--------eecceeEEecCCce
Q psy519 213 -----ISRFHLQEHEPVTSLVWSV-------TGETLVTGSLTGTVQFYGWPSASKIGI--------GVYPRCAAQPVGFE 272 (351)
Q Consensus 213 -----~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~dg~i~i~~~~~~~~~~~--------~~~~~~~~s~~~~~ 272 (351)
...+...++..+..+.|.. +++++++.-..+.|...++..++.... ..+..+++.|+|..
T Consensus 257 ~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~l 336 (353)
T 2g8s_A 257 VAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYL 336 (353)
T ss_dssp CTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCE
T ss_pred CCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcE
Confidence 0001112234567788864 466666666678888888776543322 13445777788764
Q ss_pred e
Q psy519 273 A 273 (351)
Q Consensus 273 ~ 273 (351)
.
T Consensus 337 y 337 (353)
T 2g8s_A 337 Y 337 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.66 E-value=0.021 Score=48.56 Aligned_cols=221 Identities=14% Similarity=0.041 Sum_probs=124.3
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc--c------CCCccceEEEEECCC----CcE-EEEeC---C----C
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--T------SGHDMTVWSVEACSK----GLA-LTGSR---D----T 71 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--~------~~~~~~i~~~~~~~~----~~~-~~~~~---d----~ 71 (351)
.....++|.|+ |+++++ ..+|.|++++.... . .........++++|+ +.+ ++-.. + .
T Consensus 29 ~~P~~ia~~pd--G~l~V~-e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGG--GRYLVT-ERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEET--TEEEEE-ETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCC--CeEEEE-eCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34578999999 986665 45688988864321 0 112345789999997 555 44332 3 5
Q ss_pred cEEEEeCCCC-------eee-EEeeC-CCCCeEEEEEeCCCCEEEEEeC-------------CCcEEEEeCCCCc-----
Q psy519 72 TARLWSLEQM-------YPL-RIFVG-HKQDVTCARFHPKITYIGTGSY-------------DKAVRLWSITDGA----- 124 (351)
Q Consensus 72 ~i~vw~~~~~-------~~~-~~~~~-~~~~i~~i~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~----- 124 (351)
.|..|+.... +.+ ..+.. .......++|.|||.++++.+. .|.|.-++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6777776643 111 11221 1112457999999987766432 2456666654210
Q ss_pred --eeEEe-ccCCCCeEEEEEcc-CCCEEEEEecCCCC--CeEEEEEccCC------------------ceeEEeccCCCC
Q psy519 125 --SVRVF-SDHVSPVLSIAFSP-CGKYLASGGTGSYD--KAVRLWSITDG------------------ASVRVFSDHVSP 180 (351)
Q Consensus 125 --~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~~~~d--~~i~i~d~~~~------------------~~~~~~~~~~~~ 180 (351)
....+ .++ .....++|+| +++++++ ..+. + ..|.+.. .+ ..+..+......
T Consensus 186 f~~~~i~a~G~-rnp~Gla~d~~~g~l~v~-d~g~-~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 186 FPNSPIWSYGH-RNPQGIDWHRASGVMVAT-EHGP-VGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp STTCCEEEECC-SCCCEEEECTTTCCEEEE-ECCS-SSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCcEEEEcc-CCcceEEEeCCCCCEEEE-ecCC-CCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 01111 223 2346799999 5554444 3311 1 1233322 11 122333112345
Q ss_pred EEEEEEC-------CCCcEEEEEcCCCeEEEEEcCCC-cEE--EEeeccCCCCEEEEEEcCCCCEEEEEe
Q psy519 181 VLSIAFS-------PCGKYLASGGEDGLVLTHELTTG-RVI--SRFHLQEHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 181 i~~~~~~-------~~~~~l~~~~~dg~i~i~d~~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~ 240 (351)
...++|. .+|+++++.-..+.|...++... +.. ..+.......+..+++.|||.+.++..
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 6788884 46777777777788988888753 332 222211235789999999998666654
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.59 E-value=0.023 Score=47.09 Aligned_cols=187 Identities=12% Similarity=0.092 Sum_probs=98.7
Q ss_pred EEEeC--CCcEEEEeCCCCeeeEE--eeCCCCCeEEEEEeCCCCEEEEEeCC----CcEEEEeCCCCceeEEe--ccCCC
Q psy519 65 LTGSR--DTTARLWSLEQMYPLRI--FVGHKQDVTCARFHPKITYIGTGSYD----KAVRLWSITDGASVRVF--SDHVS 134 (351)
Q Consensus 65 ~~~~~--d~~i~vw~~~~~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~--~~~~~ 134 (351)
+.|+. ...+.+||..+.+-... +.........+.+ ++..++.|+.+ ..+..||+.+.+....- .....
T Consensus 16 ~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 16 ALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 66665 36789999987653321 1111222222222 56677777754 67889999887643332 11112
Q ss_pred CeEEEEEccCCCEEEEEecC---CCCCeEEEEEccCCceeEE--eccCCCCEEEEEECCCCcEEEEEcC---------CC
Q psy519 135 PVLSIAFSPCGKYLASGGTG---SYDKAVRLWSITDGASVRV--FSDHVSPVLSIAFSPCGKYLASGGE---------DG 200 (351)
Q Consensus 135 ~i~~~~~~~~~~~l~~~~~~---~~d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~---------dg 200 (351)
....+.+ ++.+++.|+.. .....+.+||..+.+=... +.........+.+ ++++++.|+. -.
T Consensus 94 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 94 SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECC
T ss_pred ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccc
Confidence 2222233 66777777651 1125689999877642221 1111111122222 5676676653 34
Q ss_pred eEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeee
Q psy519 201 LVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLT-----GTVQFYGWPSASKIGI 258 (351)
Q Consensus 201 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~ 258 (351)
.+.+||+.+.+-...-.......-.+++.. ++++++.|+.+ ..+.+||..+.+-...
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 231 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV 231 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEEC
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC
Confidence 588999987754332221211111222222 56677776653 4689999988754433
No 322
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.45 E-value=0.082 Score=50.04 Aligned_cols=228 Identities=10% Similarity=0.005 Sum_probs=137.1
Q ss_pred ccceEEeeecCCccccEEEEecCCCceEEEecCCc--c----CCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeee
Q psy519 11 HKHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY--T----SGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPL 84 (351)
Q Consensus 11 ~~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--~----~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~ 84 (351)
...|.++.-..+ |. |..|+.+| +..||-... . ......|.++.-..+|.+-.++.+| +..||..+.+..
T Consensus 21 ~n~V~~I~qD~~--G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDSE--GL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYE 95 (758)
T ss_dssp CCCEEEEEECTT--SC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTEEC
T ss_pred cceEEEEEECCC--CC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEE
Confidence 457888888877 65 44455666 555653321 1 1224568888888888885666554 789998876543
Q ss_pred EEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEec----cCCCCeEEEEEccCCCEEEEEecCCCCCeE
Q psy519 85 RIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFS----DHVSPVLSIAFSPCGKYLASGGTGSYDKAV 160 (351)
Q Consensus 85 ~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i 160 (351)
.........|.++... ++ .|..++.+ -+..+|..+++...... .....|.++...++|.+.+ +. ++-+
T Consensus 96 ~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt----~~Gl 167 (758)
T 3ott_A 96 QPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GT----YNGL 167 (758)
T ss_dssp CCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EE----TTEE
T ss_pred CcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-Ee----CCCH
Confidence 2111123357776543 44 56666655 58889987655432211 1235688888887777655 33 3457
Q ss_pred EEEEccCCceeEEecc-----CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCE
Q psy519 161 RLWSITDGASVRVFSD-----HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGET 235 (351)
Q Consensus 161 ~i~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 235 (351)
..||..+++....... ....|.++...+++..|..|+. +-+..+|..+++... +.......|.++...++|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~l 245 (758)
T 3ott_A 168 CRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAFHNNSIKSLALDGNGDL 245 (758)
T ss_dssp EEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEE-EEEEEEEEEEEEEECTTCCE
T ss_pred hhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCCCCCeEEEEEEcCCCCE
Confidence 8888766543221111 1224888888777776666664 458889987665332 21112345888888888876
Q ss_pred EEEEeCCCeEEEEeCCCCce
Q psy519 236 LVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 236 l~~~~~dg~i~i~~~~~~~~ 255 (351)
.+. +. +-+.+++..+++.
T Consensus 246 Wig-T~-~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 246 LAG-TD-NGLYVYHNDTTPL 263 (758)
T ss_dssp EEE-ET-TEEEEECCTTSCC
T ss_pred EEE-eC-CceeEEecCCCcE
Confidence 554 44 4578888766543
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.45 E-value=0.046 Score=47.14 Aligned_cols=234 Identities=14% Similarity=0.097 Sum_probs=150.6
Q ss_pred eeecCCccccEEEEecCCCceEEEecCCc--cCCC--ccceEEEEECCCCcEEEEeCCCcEEEEeCCC-CeeeEEeeCCC
Q psy519 17 NSFKPETVEDVLANLESQKNLQSRYLPYY--TSGH--DMTVWSVEACSKGLALTGSRDTTARLWSLEQ-MYPLRIFVGHK 91 (351)
Q Consensus 17 ~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--~~~~--~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~-~~~~~~~~~~~ 91 (351)
...+|. .+.||.-. ...++++|++.. +..| ...|.--.|-.+..++.. .+..|+-|+++. ..+++.+..|.
T Consensus 71 AIMnP~--~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~ 146 (494)
T 1bpo_A 71 AIMNPA--SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHS 146 (494)
T ss_dssp EEECSS--SSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEE-CSSEEEEEESSSSCCCEEEEECCG
T ss_pred eeeCCC--CcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEE-cCCeeEEecccCCCCchhheecch
Confidence 567788 77777664 678999999886 3332 345666677766666322 346899999974 34666665543
Q ss_pred ----CCeEEEEEeCCCCEEEEEeC-------CCcEEEEeCCCCceeEEeccCCCCeEEEEEccC---CCEEEEEecCCCC
Q psy519 92 ----QDVTCARFHPKITYIGTGSY-------DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPC---GKYLASGGTGSYD 157 (351)
Q Consensus 92 ----~~i~~i~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~~~~d 157 (351)
..|..-..+++.++++..+- .|.+.+|..+.+ ..+.+.+|......+...-+ .+.++.+......
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 225 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTC
T ss_pred hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 46777777888888765432 478899998643 45666666554433333211 1244545442224
Q ss_pred CeEEEEEccCC--------ceeEEe-c---cCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEE
Q psy519 158 KAVRLWSITDG--------ASVRVF-S---DHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVT 225 (351)
Q Consensus 158 ~~i~i~d~~~~--------~~~~~~-~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 225 (351)
+.+++.++... +....+ - ....-..++..++.-..++.-+.-|.+++||+.++.++..-+... .+|-
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~-~~iF 304 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIF 304 (494)
T ss_dssp CEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEE
T ss_pred cEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC-CceE
Confidence 78999998543 111111 1 123345678888877888888999999999999999998776543 4555
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy519 226 SLVWSVTGETLVTGSLTGTVQFYGWPSASKI 256 (351)
Q Consensus 226 ~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~ 256 (351)
.-+.+....-++.....|.|.--.++..+.+
T Consensus 305 ~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp EEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred EecccCCCCcEEEEccCceEEEEEEccccch
Confidence 5555555555566668888877777665443
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.39 E-value=0.0065 Score=47.22 Aligned_cols=144 Identities=13% Similarity=0.070 Sum_probs=84.0
Q ss_pred CCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCcee------EEe-ccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEE
Q psy519 92 QDVTCARFHPKITYIGTGSYDKAVRLWSITDGASV------RVF-SDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWS 164 (351)
Q Consensus 92 ~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d 164 (351)
..+..++|+|++.+.++ .+|.++-.+..+.... ..+ ...-..-.++.|.|+|.+.++ . ||.|+-++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~---dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--S---KDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--E---TTEEEEES
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--C---CCEEEEeC
Confidence 36779999999886666 6788777776552221 111 000111367899999988887 4 89988877
Q ss_pred ccCCce-------eEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCc------EEEEeeccCCCCEEEEEEcC
Q psy519 165 ITDGAS-------VRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGR------VISRFHLQEHEPVTSLVWSV 231 (351)
Q Consensus 165 ~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~ 231 (351)
--+... ...-...=..+..+.+.|+|.+.++. |+.++-....++. ....+-...-...+.+.|.+
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 532110 11111111357899999999988777 7765433222111 01111111223455677888
Q ss_pred CCCEEEEEeCCCeEE
Q psy519 232 TGETLVTGSLTGTVQ 246 (351)
Q Consensus 232 ~~~~l~~~~~dg~i~ 246 (351)
++.+.++. +|.++
T Consensus 192 ~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 192 VGTLFGVQ--GGKFY 204 (236)
T ss_dssp TSCEEEEE--TTEEE
T ss_pred CCcEEEEe--CCeEE
Confidence 88877666 66443
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.37 E-value=0.03 Score=46.49 Aligned_cols=179 Identities=11% Similarity=-0.017 Sum_probs=92.6
Q ss_pred CcEEEEeCCCCeeeEE--eeCCCCCeEEEEEeCCCCEEEEEeC----C-----CcEEEEeCCCCceeEEe--ccCCCCeE
Q psy519 71 TTARLWSLEQMYPLRI--FVGHKQDVTCARFHPKITYIGTGSY----D-----KAVRLWSITDGASVRVF--SDHVSPVL 137 (351)
Q Consensus 71 ~~i~vw~~~~~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~----d-----g~i~i~d~~~~~~~~~~--~~~~~~i~ 137 (351)
..+.+||+.+.+-... +........ ++.. ++.+++.|+. + ..+.+||+.+.+....- ........
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLA-GCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCE-EEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccce-EEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 4688888887653322 111111222 2222 5667777765 2 46889998876543321 11112222
Q ss_pred EEEEccCCCEEEEEecCC--CCCeEEEEEccCCceeE--EeccCCCCEEEEEECCCCcEEEEEcCC-----CeEEEEEcC
Q psy519 138 SIAFSPCGKYLASGGTGS--YDKAVRLWSITDGASVR--VFSDHVSPVLSIAFSPCGKYLASGGED-----GLVLTHELT 208 (351)
Q Consensus 138 ~~~~~~~~~~l~~~~~~~--~d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~ 208 (351)
.+.+ ++++++.|+... .-..+.+||+.+.+=.. .+.........+.+ ++++++.|+.+ ..+.+||+.
T Consensus 117 ~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 192 (308)
T 1zgk_A 117 VGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPE 192 (308)
T ss_dssp EEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred EEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCC
Confidence 2333 667777776411 02468899987653211 11111111222333 56777777654 458899987
Q ss_pred CCcEEEEeeccCC-CCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceee
Q psy519 209 TGRVISRFHLQEH-EPVTSLVWSVTGETLVTGSLT-----GTVQFYGWPSASKIG 257 (351)
Q Consensus 209 ~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~ 257 (351)
+.+-...-..... .....+.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 193 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 193 RNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 7654322111111 11222232 56777777654 569999998875444
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.37 E-value=0.047 Score=45.48 Aligned_cols=185 Identities=9% Similarity=-0.022 Sum_probs=97.1
Q ss_pred EEEeCCCcEEEEeCCCCeeeE-EeeCCCCCeEEEEEeCCCCEEEEEeC-----C------CcEEEEeCCCCceeEEeccC
Q psy519 65 LTGSRDTTARLWSLEQMYPLR-IFVGHKQDVTCARFHPKITYIGTGSY-----D------KAVRLWSITDGASVRVFSDH 132 (351)
Q Consensus 65 ~~~~~d~~i~vw~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~l~~~~~-----d------g~i~i~d~~~~~~~~~~~~~ 132 (351)
+.|+ ..+..||..+++-.. .+..............++..++.|+. . ..+..||..+.+.... ...
T Consensus 9 ~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~ 85 (315)
T 4asc_A 9 MISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM-PPL 85 (315)
T ss_dssp EEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC-CCB
T ss_pred EEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC-CCC
Confidence 5555 679999998876432 11111122233333457778888873 1 1278899887764322 111
Q ss_pred CCC---eEEEEEccCCCEEEEEecC-----CCCCeEEEEEccCCceeEEec---cCCCCEEEEEECCCCcEEEEEcC-C-
Q psy519 133 VSP---VLSIAFSPCGKYLASGGTG-----SYDKAVRLWSITDGASVRVFS---DHVSPVLSIAFSPCGKYLASGGE-D- 199 (351)
Q Consensus 133 ~~~---i~~~~~~~~~~~l~~~~~~-----~~d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~-d- 199 (351)
..+ ...+.+ ++..++.|+.. .....+.+||..+.+ -..+. ........+. -++++++.|+. +
T Consensus 86 p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 86 PSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFK-WGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSD 160 (315)
T ss_dssp SSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEE--ETTEEEEECCBCTT
T ss_pred CcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCc-EeECCCCCCcccceeEEE--ECCEEEEEeCCCCC
Confidence 111 122222 56677777641 123568999987753 22221 1111112222 25677777765 2
Q ss_pred ----CeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeee
Q psy519 200 ----GLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTG-----TVQFYGWPSASKIGI 258 (351)
Q Consensus 200 ----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~ 258 (351)
..+.+||+.+.+-...-.......-.+++. -++++++.|+.++ .+.+||..+.+-...
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 468899988765333211111111112222 2667777777653 588999988755443
No 327
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.37 E-value=0.046 Score=54.27 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=137.5
Q ss_pred CCceEEEecCCccCCCc--cceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeC
Q psy519 34 QKNLQSRYLPYYTSGHD--MTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSY 111 (351)
Q Consensus 34 ~~~i~i~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 111 (351)
..+|.|.|+......-. -.--+.-.+|..++++--...++.|+|+++.+.+..+.- ..+|.-=.|-.+ +.|+..+
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~-~~l~lVT- 123 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT- 123 (1630)
T ss_pred CceEEEEECCCCCCcccccccchhhccCCCcceEEEecCCeEEEeehHHhhhhccccc-CCCceEEEecCC-CeeEEEc-
Confidence 34788888877521111 112234457777774444578999999998877766653 445666667543 3444443
Q ss_pred CCcEEEEeCCC-CceeEEeccC----CCCeEEEEEccCCCEEEEEecC----CCCCeEEEEEccCCceeEEeccCCCCEE
Q psy519 112 DKAVRLWSITD-GASVRVFSDH----VSPVLSIAFSPCGKYLASGGTG----SYDKAVRLWSITDGASVRVFSDHVSPVL 182 (351)
Q Consensus 112 dg~i~i~d~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~----~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 182 (351)
+..|+.|++.. ..+.+.+..| ...|..-..+++.++++..+-. ...|.+.+|....+ ..+.+.+|.....
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~ 202 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFA 202 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhh
Confidence 56799999964 3344444433 4678888889999998866542 23588999997644 3344556655443
Q ss_pred EEEECC---CCcEEEEEcC---CCeEEEEEcCCC---cEE-----EEeeccC---CCCEEEEEEcCCCCEEEEEeCCCeE
Q psy519 183 SIAFSP---CGKYLASGGE---DGLVLTHELTTG---RVI-----SRFHLQE---HEPVTSLVWSVTGETLVTGSLTGTV 245 (351)
Q Consensus 183 ~~~~~~---~~~~l~~~~~---dg~i~i~d~~~~---~~~-----~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i 245 (351)
.+.... ....+..+.. .+.++|.++... ... ..+..+. ..-..++..++....+..-+.-|.+
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~ 282 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence 333321 1123332221 367888887432 111 0111111 2345677888888888888899999
Q ss_pred EEEeCCCCceeeeeec
Q psy519 246 QFYGWPSASKIGIGVY 261 (351)
Q Consensus 246 ~i~~~~~~~~~~~~~~ 261 (351)
++||+.++..+...++
T Consensus 283 ~~~d~~t~~~i~~~ri 298 (1630)
T 1xi4_A 283 HLYDLETGTCIYMNRI 298 (1630)
T ss_pred EEEecccchhhhhccc
Confidence 9999999988766554
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.30 E-value=0.032 Score=46.54 Aligned_cols=220 Identities=12% Similarity=0.019 Sum_probs=106.5
Q ss_pred cEEEEecCCCceEEEecCCc------cCC-CccceEEEEECCCCcE-EEEeC----CC-------cEEEEeCCCCeeeEE
Q psy519 26 DVLANLESQKNLQSRYLPYY------TSG-HDMTVWSVEACSKGLA-LTGSR----DT-------TARLWSLEQMYPLRI 86 (351)
Q Consensus 26 ~~l~~~~~~~~i~i~~~~~~------~~~-~~~~i~~~~~~~~~~~-~~~~~----d~-------~i~vw~~~~~~~~~~ 86 (351)
.+++.|+. .+..||.... ... ....-.+++ ..++.+ +.|+. ++ .+.+||..+.+-...
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIV-TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEE-EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 45555553 3778887766 111 111112333 345555 77773 11 177888877653321
Q ss_pred --eeCCCCCeEEEEEeCCCCEEEEEeCC-------CcEEEEeCCCCceeEEeccCCCCe--EEEEEccCCCEEEEEecCC
Q psy519 87 --FVGHKQDVTCARFHPKITYIGTGSYD-------KAVRLWSITDGASVRVFSDHVSPV--LSIAFSPCGKYLASGGTGS 155 (351)
Q Consensus 87 --~~~~~~~i~~i~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~~~~ 155 (351)
+...........+ ++..++.|+.+ ..+.+||+.+.+....-. ...+. .+++. .++.+++.|+...
T Consensus 94 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~iyv~GG~~~ 169 (318)
T 2woz_A 94 PPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN-LPIKVYGHNVIS-HNGMIYCLGGKTD 169 (318)
T ss_dssp SCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC-CSSCEESCEEEE-ETTEEEEECCEES
T ss_pred CCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC-CCCcccccEEEE-ECCEEEEEcCCCC
Confidence 1111122222222 56777777754 358889988776443321 11111 11222 3667777776411
Q ss_pred ---CCCeEEEEEccCCceeEE--eccCCCCEEEEEECCCCcEEEEEcCC-----CeEEEEEcCCCcEEEEeeccCCCCEE
Q psy519 156 ---YDKAVRLWSITDGASVRV--FSDHVSPVLSIAFSPCGKYLASGGED-----GLVLTHELTTGRVISRFHLQEHEPVT 225 (351)
Q Consensus 156 ---~d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~ 225 (351)
.-..+.+||+.+.+=... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-.......-.
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 247 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI 247 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC
T ss_pred CCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce
Confidence 124689999877642111 1111111122222 56777777643 35778998876543321111111111
Q ss_pred EEEEcCCCCEEEEEeCC--------------CeEEEEeCCCCce
Q psy519 226 SLVWSVTGETLVTGSLT--------------GTVQFYGWPSASK 255 (351)
Q Consensus 226 ~~~~~~~~~~l~~~~~d--------------g~i~i~~~~~~~~ 255 (351)
+++. .++++++.|+.+ ..+.+||..+.+-
T Consensus 248 ~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 248 SLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred EEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 2222 246666666543 3466777666543
No 329
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.25 E-value=0.071 Score=44.99 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=121.6
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc-----------cCCCccceEEEEECCC----CcE-EEEe--CCCcE
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----------TSGHDMTVWSVEACSK----GLA-LTGS--RDTTA 73 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----------~~~~~~~i~~~~~~~~----~~~-~~~~--~d~~i 73 (351)
.....++|.|+ |.++++-...|.|++++.... ..........|+++|+ +.+ ++-+ .++.|
T Consensus 32 ~~P~~ia~~pd--G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 32 NSPWGLAPLPG--GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp SSEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCceEEEEcCC--CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 44578999999 998887755899998876433 1123456789999995 555 4322 44556
Q ss_pred EEEeCCCC----------eeeE-Eee-CCCCCeEEEEEeCCCCEEEEEeC-------------CCcEEEEeCCCCc----
Q psy519 74 RLWSLEQM----------YPLR-IFV-GHKQDVTCARFHPKITYIGTGSY-------------DKAVRLWSITDGA---- 124 (351)
Q Consensus 74 ~vw~~~~~----------~~~~-~~~-~~~~~i~~i~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~---- 124 (351)
.-|.+..+ +.+. .+. .....-..|+|.|||.+.++.+. .|.|.-.+....-
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 66655441 1111 121 11112356999999987777542 3555555554220
Q ss_pred ---eeEEe-ccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc------------------eeEEeccCCCCEE
Q psy519 125 ---SVRVF-SDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA------------------SVRVFSDHVSPVL 182 (351)
Q Consensus 125 ---~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~------------------~~~~~~~~~~~i~ 182 (351)
....+ .++. ....++|+|+|.+.++= .+ .++.=.|--+..+. .+..+..+.....
T Consensus 190 Pf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d-~g-~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 190 PFPGSPVYSYGHR-NVQGLAWDDKQRLFASE-FG-QDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp SSTTCCEEEBCCS-BCCEEEECTTCCEEEEE-CC-SSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCCCeEEeeCCC-CcceEEECCCCCEEEEe-cC-CCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 01112 2343 34679999987665542 21 12222222222221 1222222223456
Q ss_pred EEEECCCCcEEEEEcCCCeEEEEEcCCCcEE---EEeeccCCCCEEEEEEcCCCCEEEEEe
Q psy519 183 SIAFSPCGKYLASGGEDGLVLTHELTTGRVI---SRFHLQEHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 183 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~ 240 (351)
.++|. ++..+...-..+.|....+...... ..+.......+..++..|||.++++..
T Consensus 267 G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 267 GIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred ceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 67776 4666666666666766666544321 122112235788888888887665543
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.18 E-value=0.033 Score=43.35 Aligned_cols=141 Identities=11% Similarity=-0.043 Sum_probs=81.5
Q ss_pred cceEEEEECCCCcEEEEeCCCcEEEEeCCCCeee------EEee--CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy519 51 MTVWSVEACSKGLALTGSRDTTARLWSLEQMYPL------RIFV--GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITD 122 (351)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~------~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~ 122 (351)
..+..++|+|+|.+... .+|.++-.+..+.+.. ..+- +-. .-.++.|.|+|.+.++ .||.|+-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 35679999999998443 7777777776542211 1110 111 1367889999988777 469998888644
Q ss_pred Ccee-------EEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc------eeEEe-ccCCCCEEEEEECC
Q psy519 123 GASV-------RVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA------SVRVF-SDHVSPVLSIAFSP 188 (351)
Q Consensus 123 ~~~~-------~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~------~~~~~-~~~~~~i~~~~~~~ 188 (351)
...- ..-...=..+..+.+.|+|.+.++. |+.++-...-++. ....+ ...-...+-+.|.|
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-----dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-----GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-----TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-----CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 2211 1111122467899999999988876 4554332211111 01111 12222344567888
Q ss_pred CCcEEEEEcCCCeE
Q psy519 189 CGKYLASGGEDGLV 202 (351)
Q Consensus 189 ~~~~l~~~~~dg~i 202 (351)
++.+.++. +|.+
T Consensus 192 ~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 192 VGTLFGVQ--GGKF 203 (236)
T ss_dssp TSCEEEEE--TTEE
T ss_pred CCcEEEEe--CCeE
Confidence 88877766 6643
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.0057 Score=51.40 Aligned_cols=190 Identities=9% Similarity=-0.015 Sum_probs=107.1
Q ss_pred CcEEEEeCCCcEEEEeCCCCeeeEEeeCC-CCCeEEEEEe--C-CCCEEEEE-eCCCcEEEEeCCCCceeEEecc----C
Q psy519 62 GLALTGSRDTTARLWSLEQMYPLRIFVGH-KQDVTCARFH--P-KITYIGTG-SYDKAVRLWSITDGASVRVFSD----H 132 (351)
Q Consensus 62 ~~~~~~~~d~~i~vw~~~~~~~~~~~~~~-~~~i~~i~~~--~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~----~ 132 (351)
+.++.++.||.|.-+|.++|+.+..+... ..++....-. + ++..++.. +.||.++.++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 45588999999999999999999888654 1222221110 1 22333333 5799999999988865443321 1
Q ss_pred CCCeEE---EEE-c----cCCCEEEEEecCCCCCeEEEEEccCCceeEEeccCC--CC-----EEEEEEC-----CCCcE
Q psy519 133 VSPVLS---IAF-S----PCGKYLASGGTGSYDKAVRLWSITDGASVRVFSDHV--SP-----VLSIAFS-----PCGKY 192 (351)
Q Consensus 133 ~~~i~~---~~~-~----~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~-----i~~~~~~-----~~~~~ 192 (351)
..++.. ... . ..+..+++++. ++.+...|+++|+.+..+.... .. ..+.... ..+..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSM---RTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEE---EEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred ccccccCCCceeecccccccCCEEEEEec---CCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 223321 000 0 14567788888 9999999999999998886432 10 0011110 12356
Q ss_pred EEEEcCCCeEEEEEcCCCcEEEEeeccC--CCCEE-----EEEEcCCCCEEEEEeCCCeEEEEeCCCCceee
Q psy519 193 LASGGEDGLVLTHELTTGRVISRFHLQE--HEPVT-----SLVWSVTGETLVTGSLTGTVQFYGWPSASKIG 257 (351)
Q Consensus 193 l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~v~-----~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~ 257 (351)
++.+..+..+.+.+ ++|+ .-.+.... ...+. +-..+.|+.+ +.++.||.|.-+|..+++.+-
T Consensus 168 v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77776666666666 4443 21111000 00000 0001124565 457889999999998887654
No 332
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.03 E-value=0.11 Score=43.08 Aligned_cols=230 Identities=4% Similarity=-0.074 Sum_probs=122.5
Q ss_pred ccEEEEec--CCCceEEEecCCccCCCccceEEEEECCCCcE--EEEeCC-------------CcEEEEeCCCCeeeEEe
Q psy519 25 EDVLANLE--SQKNLQSRYLPYYTSGHDMTVWSVEACSKGLA--LTGSRD-------------TTARLWSLEQMYPLRIF 87 (351)
Q Consensus 25 ~~~l~~~~--~~~~i~i~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~d-------------~~i~vw~~~~~~~~~~~ 87 (351)
++.|.... .++.|+..+.+......-..-.+--++++|.. .+...+ ..|+..++...+... +
T Consensus 25 g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l 103 (302)
T 3s25_A 25 DGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-L 103 (302)
T ss_dssp TTEEEEEEGGGTTEEEEEETTSCSCEEEEEEEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-E
T ss_pred CCEEEEEeCCCCceEEEEcCCCCCCEEccCCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-e
Confidence 66666653 24555555544331000011112345667755 343332 467777877665333 3
Q ss_pred eCCCCCeEEEEEeCCCCEEEEEe--C--CCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEE
Q psy519 88 VGHKQDVTCARFHPKITYIGTGS--Y--DKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLW 163 (351)
Q Consensus 88 ~~~~~~i~~i~~~~~~~~l~~~~--~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~ 163 (351)
... . +..|+++++.|+-.. . ...|+.-++.... ...+..+.. .+++|+++.|+-.+. ....|...
T Consensus 104 ~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~--g~~~Iy~~ 172 (302)
T 3s25_A 104 DPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNP--KNGQLYRY 172 (302)
T ss_dssp ECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECT--TTCCEEEE
T ss_pred ecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeC--CCceEEEE
Confidence 211 1 236777888888765 2 3456666665433 344433322 456778888886653 25788888
Q ss_pred EccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCC--CeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeC
Q psy519 164 SITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGED--GLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSL 241 (351)
Q Consensus 164 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 241 (351)
++..+.....+. +... ..+.|++.+|+-...+ ..|..-++.... ...+. ...+ ..|+|++++|+.++.
T Consensus 173 ~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt---~~~~--~~~~~~g~~Iy~~~~ 242 (302)
T 3s25_A 173 DTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLT---EANI--EHYNVYGSLIFYQRG 242 (302)
T ss_dssp ETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECS---CSCE--EEEEEETTEEEEEEC
T ss_pred ECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEe---CCCc--ceEEECCCEEEEEEC
Confidence 887665443332 2232 3356888887765433 356666665444 33332 2233 347788888876533
Q ss_pred --CCeEEEEeCCCCceeeeeecceeEEecCCceeeee
Q psy519 242 --TGTVQFYGWPSASKIGIGVYPRCAAQPVGFEAATL 276 (351)
Q Consensus 242 --dg~i~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 276 (351)
.+.|..-++....+.....-....+++.+..+...
T Consensus 243 ~~~~~i~~~~~DG~~r~~l~~~~~~~i~i~~d~Iy~t 279 (302)
T 3s25_A 243 GDNPALCVVKNDGTGFKELAKGEFCNINVTSQYVYFT 279 (302)
T ss_dssp SSSCEEEEEETTSCCCEEEEESCEEEEEECSSEEEEE
T ss_pred CCCcEEEEEECCCCccEEeeCCccceEEEeCCEEEEE
Confidence 46777777765443333222223455555554443
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.02 E-value=0.12 Score=43.54 Aligned_cols=222 Identities=13% Similarity=0.092 Sum_probs=118.0
Q ss_pred ccceEEEEECCCCcEEEEeC-CCcEEEEeCCCCeee--EEe----eCCCCCeEEEEEeCC---CCEEEEE---eCCCcEE
Q psy519 50 DMTVWSVEACSKGLALTGSR-DTTARLWSLEQMYPL--RIF----VGHKQDVTCARFHPK---ITYIGTG---SYDKAVR 116 (351)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~-d~~i~vw~~~~~~~~--~~~----~~~~~~i~~i~~~~~---~~~l~~~---~~dg~i~ 116 (351)
-...+.|+|.|+|.++.... .|.|++++..+++.. ..+ .........|+++|+ ...|+.. ..+..|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 34578999999999966666 899999987655432 111 123456889999995 3344332 2345666
Q ss_pred EEeCCCC----------cee-EEec-cCCCCeEEEEEccCCCEEEEEecC----------CCCCeEEEEEccCC------
Q psy519 117 LWSITDG----------ASV-RVFS-DHVSPVLSIAFSPCGKYLASGGTG----------SYDKAVRLWSITDG------ 168 (351)
Q Consensus 117 i~d~~~~----------~~~-~~~~-~~~~~i~~~~~~~~~~~l~~~~~~----------~~d~~i~i~d~~~~------ 168 (351)
-|.+..+ +.+ ..+. .....-..|+|.|||.+.++.+.. ...+.|.-.+....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665541 111 1121 112234569999999877775421 01344555554321
Q ss_pred ---ceeEEeccCCCCEEEEEECCCCcEEEEEcC-CCeEEEEEcCCCc------------------EEEEeeccCCCCEEE
Q psy519 169 ---ASVRVFSDHVSPVLSIAFSPCGKYLASGGE-DGLVLTHELTTGR------------------VISRFHLQEHEPVTS 226 (351)
Q Consensus 169 ---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~------------------~~~~~~~~~~~~v~~ 226 (351)
..+.. .+|.. ...++|+|+|.++++=.. ++.=.|--+..+. .+..+. .++.....
T Consensus 191 f~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~-~~~~ap~G 267 (347)
T 3das_A 191 FPGSPVYS-YGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS-TDEASPSG 267 (347)
T ss_dssp STTCCEEE-BCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC-TTTCCEEE
T ss_pred CCCCeEEe-eCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC-CCCCCCcc
Confidence 11222 13433 457899998876655422 2212222222221 111111 11135667
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceee---------eeecceeEEecCCceeee
Q psy519 227 LVWSVTGETLVTGSLTGTVQFYGWPSASKIG---------IGVYPRCAAQPVGFEAAT 275 (351)
Q Consensus 227 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~---------~~~~~~~~~s~~~~~~~~ 275 (351)
++|. ++.++...-..+.|....+....... ...+..++..|||...++
T Consensus 268 ~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~ 324 (347)
T 3das_A 268 IAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLV 324 (347)
T ss_dssp EEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEE
T ss_pred eEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEE
Confidence 7776 45555555555666666665443211 134456777888765443
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.98 E-value=0.088 Score=52.39 Aligned_cols=233 Identities=15% Similarity=0.111 Sum_probs=137.9
Q ss_pred eeecCCccccEEEEecCCCceEEEecCCc--cCCC--ccceEEEEECCCCcEEEEeCCCcEEEEeCCC-CeeeEEeeCC-
Q psy519 17 NSFKPETVEDVLANLESQKNLQSRYLPYY--TSGH--DMTVWSVEACSKGLALTGSRDTTARLWSLEQ-MYPLRIFVGH- 90 (351)
Q Consensus 17 ~~~sp~~~~~~l~~~~~~~~i~i~~~~~~--~~~~--~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~-~~~~~~~~~~- 90 (351)
...+|. .+.||.-. ..+++|++++.. +..| ...|.--.|-.+..++..+ +..|+.|++.. ..+++.+..|
T Consensus 71 AIMnP~--~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPA--SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCC--cceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 567788 77777654 788999999877 3333 4567777888777772222 36799999974 3444444444
Q ss_pred ---CCCeEEEEEeCCCCEEEEEe-------CCCcEEEEeCCCCceeEEeccCCCCeEEEEEc--c-CCCEEEEEecCCCC
Q psy519 91 ---KQDVTCARFHPKITYIGTGS-------YDKAVRLWSITDGASVRVFSDHVSPVLSIAFS--P-CGKYLASGGTGSYD 157 (351)
Q Consensus 91 ---~~~i~~i~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~--~-~~~~l~~~~~~~~d 157 (351)
...|..-..+++.++++..+ -.|.+.+|.++.+ ..+.+.+|......+... + ..+.++.+......
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 45676777788888776543 2478999987643 334455554433333331 1 12234433331123
Q ss_pred CeEEEEEccCC---ceeE------E-ecc--CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEE
Q psy519 158 KAVRLWSITDG---ASVR------V-FSD--HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVT 225 (351)
Q Consensus 158 ~~i~i~d~~~~---~~~~------~-~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 225 (351)
+.++|.++... .... . +.. ...-..++..++.-..+..-+.-|.+.+||+.++..+..-+... .+|-
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~-~~iF 304 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIF 304 (1630)
T ss_pred ceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccC-CceE
Confidence 67888887542 1110 0 111 12223467778777778888889999999999999887655332 3344
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy519 226 SLVWSVTGETLVTGSLTGTVQFYGWPSASK 255 (351)
Q Consensus 226 ~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 255 (351)
..+.+....-++.....|.|.--.+.....
T Consensus 305 ~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred EeccCCCCCceEEEcCCceEEEEEEccchh
Confidence 334333333344444667666665554443
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.95 E-value=0.096 Score=44.38 Aligned_cols=225 Identities=11% Similarity=-0.045 Sum_probs=109.9
Q ss_pred ccEEEEecC-CCceEEEecCC--c-------cC-CCccceEEEEECCCCcE-EEEeC-C---------CcEEEEeCCCCe
Q psy519 25 EDVLANLES-QKNLQSRYLPY--Y-------TS-GHDMTVWSVEACSKGLA-LTGSR-D---------TTARLWSLEQMY 82 (351)
Q Consensus 25 ~~~l~~~~~-~~~i~i~~~~~--~-------~~-~~~~~i~~~~~~~~~~~-~~~~~-d---------~~i~vw~~~~~~ 82 (351)
+.+++.|+. ...+..||... . .. .....-..+.+ ++++ +.|+. + ..+.+||+.+.+
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 677777764 35688888863 2 11 11111122222 4555 77765 2 468899998765
Q ss_pred eeEE--ee-CCCCCeEEEEEeCCCCEEEEEeCC---------------------------------------CcEEEEeC
Q psy519 83 PLRI--FV-GHKQDVTCARFHPKITYIGTGSYD---------------------------------------KAVRLWSI 120 (351)
Q Consensus 83 ~~~~--~~-~~~~~i~~i~~~~~~~~l~~~~~d---------------------------------------g~i~i~d~ 120 (351)
-... .. .......++. .++++++.|+.+ ..+.+||+
T Consensus 98 W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred EEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 3322 11 1112222232 467778888754 57899999
Q ss_pred CCCceeEEeccC-CCCe-EEEEEccCCCEEEEEecCC---CCCeEEEEEc--cCCceeEEeccC---CCCEE-EEEECCC
Q psy519 121 TDGASVRVFSDH-VSPV-LSIAFSPCGKYLASGGTGS---YDKAVRLWSI--TDGASVRVFSDH---VSPVL-SIAFSPC 189 (351)
Q Consensus 121 ~~~~~~~~~~~~-~~~i-~~~~~~~~~~~l~~~~~~~---~d~~i~i~d~--~~~~~~~~~~~~---~~~i~-~~~~~~~ 189 (351)
.+.+....-... ...- .+++.. ++++++.|+... ....+..||+ .+.+ -..+... ..... .++. .+
T Consensus 176 ~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~~~~~~~-~~ 252 (357)
T 2uvk_A 176 STQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVAGGFAGI-SN 252 (357)
T ss_dssp TTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCBSCEEEE-ET
T ss_pred CCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCcccccceEEE-EC
Confidence 877644332111 1111 223322 566667765311 1345777876 3321 2222111 11111 1222 25
Q ss_pred CcEEEEEcCC----------------------CeEEEEEcCCCcEEEEeeccCC-CCEEEEEEcCCCCEEEEEeCCC---
Q psy519 190 GKYLASGGED----------------------GLVLTHELTTGRVISRFHLQEH-EPVTSLVWSVTGETLVTGSLTG--- 243 (351)
Q Consensus 190 ~~~l~~~~~d----------------------g~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg--- 243 (351)
+++++.|+.+ ..+.+||+.+.+-...-..... ..-..+ ..++++++.|+.++
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~ 330 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGGK 330 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGGC
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCCC
Confidence 6777777632 2477899876643332222221 111222 23677777777542
Q ss_pred ---eEEEEeCCCCceeee
Q psy519 244 ---TVQFYGWPSASKIGI 258 (351)
Q Consensus 244 ---~i~i~~~~~~~~~~~ 258 (351)
.+.++++++++.+..
T Consensus 331 ~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 331 AVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEEEEEC-CCSCEEE
T ss_pred EeeeEEEEEEcCcEeEee
Confidence 466668887766544
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.94 E-value=0.2 Score=44.69 Aligned_cols=254 Identities=12% Similarity=0.014 Sum_probs=145.4
Q ss_pred EEEecCCCceEEEecCCc--------------------------cCC----CccceE--EEEEC---CCCcE-EEEe-CC
Q psy519 28 LANLESQKNLQSRYLPYY--------------------------TSG----HDMTVW--SVEAC---SKGLA-LTGS-RD 70 (351)
Q Consensus 28 l~~~~~~~~i~i~~~~~~--------------------------~~~----~~~~i~--~~~~~---~~~~~-~~~~-~d 70 (351)
+.+|+.+|.++|+-+... +.. ..+... .+.+. -||++ +.-. .+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 668888999999998877 100 000011 12222 13455 3333 35
Q ss_pred CcEEEEeCCCCeeeEEeeC-CCCCeEEEEEe--CCCCEEEEEeC-------CCcE------------EEEeCCCCceeEE
Q psy519 71 TTARLWSLEQMYPLRIFVG-HKQDVTCARFH--PKITYIGTGSY-------DKAV------------RLWSITDGASVRV 128 (351)
Q Consensus 71 ~~i~vw~~~~~~~~~~~~~-~~~~i~~i~~~--~~~~~l~~~~~-------dg~i------------~i~d~~~~~~~~~ 128 (351)
..|...+++..++-+.+.- ....+.+++|- |+..+++.++. ||.. ...|..+.+....
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 6677788888776655543 34578888886 67788887765 2321 0112222222222
Q ss_pred eccCCCCeEEEEEccCCCEEEEEecCC------------CCCeE-------------------------EEEEccC----
Q psy519 129 FSDHVSPVLSIAFSPCGKYLASGGTGS------------YDKAV-------------------------RLWSITD---- 167 (351)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~l~~~~~~~------------~d~~i-------------------------~i~d~~~---- 167 (351)
+.- .+....+...++|.+.++.+..+ ....+ .+.|.+.
T Consensus 233 v~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~ 311 (638)
T 3sbq_A 233 VIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK 311 (638)
T ss_dssp EEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred EEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence 111 12333455677888888776421 11124 4444433
Q ss_pred Cc-eeEEeccCCCCEEEEEECCCCcEEEEEcC-CCeEEEEEcCCC------cE-------EEEeeccCCCCEEEEEEcCC
Q psy519 168 GA-SVRVFSDHVSPVLSIAFSPCGKYLASGGE-DGLVLTHELTTG------RV-------ISRFHLQEHEPVTSLVWSVT 232 (351)
Q Consensus 168 ~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~------~~-------~~~~~~~~~~~v~~~~~~~~ 232 (351)
+. ....+. -......+..+|||+++++++. +.++.++|++.- +. .... ...-.....+|.++
T Consensus 312 ~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~--e~GlGPlHt~Fd~~ 388 (638)
T 3sbq_A 312 DSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP--ELGLGPLHTTFDGR 388 (638)
T ss_dssp CCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC--BCCSCEEEEEECSS
T ss_pred CCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec--cCCCcccEEEECCC
Confidence 11 111111 1223456889999999887764 788999998731 11 2222 23456889999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCC----------ceeeeeecc----------eeEEecCCceeeeeeccceeeEE
Q psy519 233 GETLVTGSLTGTVQFYGWPSA----------SKIGIGVYP----------RCAAQPVGFEAATLAANSRVRTL 285 (351)
Q Consensus 233 ~~~l~~~~~dg~i~i~~~~~~----------~~~~~~~~~----------~~~~s~~~~~~~~~~~~~~~~~~ 285 (351)
|....+.--|.+|.-|++... ..+....++ .-.-.|+|++|+++.--+.++.+
T Consensus 389 G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl 461 (638)
T 3sbq_A 389 GNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFL 461 (638)
T ss_dssp SEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSC
T ss_pred CceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCc
Confidence 965566667999999998753 222222211 12347899999988887777644
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.92 E-value=0.19 Score=44.23 Aligned_cols=107 Identities=13% Similarity=0.102 Sum_probs=64.2
Q ss_pred CCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCcee--EEecc------CCCCeEEEEEccC---CCEEEEEecCC----
Q psy519 91 KQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASV--RVFSD------HVSPVLSIAFSPC---GKYLASGGTGS---- 155 (351)
Q Consensus 91 ~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~------~~~~i~~~~~~~~---~~~l~~~~~~~---- 155 (351)
-...+.|+|.|+|+++++-...+.|++++..+++.. ..+.. ....+..|+|+|+ +..|+++....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345679999999987776544457988886555432 22221 2456789999996 66666554310
Q ss_pred --C----CCeEEEEEccCC-------ceeE-Eec-cCCCCEEEEEECCCCcEEEEEc
Q psy519 156 --Y----DKAVRLWSITDG-------ASVR-VFS-DHVSPVLSIAFSPCGKYLASGG 197 (351)
Q Consensus 156 --~----d~~i~i~d~~~~-------~~~~-~~~-~~~~~i~~~~~~~~~~~l~~~~ 197 (351)
. ...|.-|++... +.+. .+. ........|+|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 0 135666665432 1111 122 1123478999999998776644
No 338
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.84 E-value=0.16 Score=42.07 Aligned_cols=188 Identities=7% Similarity=0.016 Sum_probs=108.1
Q ss_pred CCcEEEEeCCCCeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCC--------------CcEEEEeCCCCceeEEeccCCCC
Q psy519 70 DTTARLWSLEQMYPLRIFVGHKQDVTCARFHPKITYIGTGSYD--------------KAVRLWSITDGASVRVFSDHVSP 135 (351)
Q Consensus 70 d~~i~vw~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d--------------g~i~i~d~~~~~~~~~~~~~~~~ 135 (351)
++.|...+.+... ...+... .+--+++++..|+.+... ..|+..++..++... +.. ..
T Consensus 36 ~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~ 107 (302)
T 3s25_A 36 NGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DP 107 (302)
T ss_dssp TTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SC
T ss_pred CceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CC
Confidence 4556666654433 3333221 123457888888776543 367777777655333 321 11
Q ss_pred eEEEEEccCCCEEEEEe-cCCCCCeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcC-CCeEEEEEcCCCcEE
Q psy519 136 VLSIAFSPCGKYLASGG-TGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGE-DGLVLTHELTTGRVI 213 (351)
Q Consensus 136 i~~~~~~~~~~~l~~~~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~ 213 (351)
+..|++++++|+... ....+..|+..++.... ...+..+.. ..++|+++.|+-.+. ...|...++..+...
T Consensus 108 --~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 108 --CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA 180 (302)
T ss_dssp --EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE
T ss_pred --ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE
Confidence 236788999988775 11115567777776433 444444432 346777887776554 678888888665433
Q ss_pred EEeeccCCCCEEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceeeeeecceeEEecCCceeeeee
Q psy519 214 SRFHLQEHEPVTSLVWSVTGETLVTGSLT--GTVQFYGWPSASKIGIGVYPRCAAQPVGFEAATLA 277 (351)
Q Consensus 214 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 277 (351)
.+. .. ... ..+.|++.+|+-...+ ..|..-++..........-....++|++..+....
T Consensus 181 -~l~-~~--~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 181 -LFY-DC--NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANIEHYNVYGSLIFYQR 241 (302)
T ss_dssp -EEE-CS--CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCEEEEEEETTEEEEEE
T ss_pred -EEe-CC--Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCcceEEECCCEEEEEE
Confidence 332 22 222 3456999988876543 36777777766544432222345888888876543
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.73 E-value=0.2 Score=41.65 Aligned_cols=187 Identities=9% Similarity=0.004 Sum_probs=94.2
Q ss_pred EEEeCCCcEEEEeCCCCeeeEE-eeCCCCCeEEEEEeCCCCEEEEEeC----CC-------cEEEEeCCCCceeEEe--c
Q psy519 65 LTGSRDTTARLWSLEQMYPLRI-FVGHKQDVTCARFHPKITYIGTGSY----DK-------AVRLWSITDGASVRVF--S 130 (351)
Q Consensus 65 ~~~~~d~~i~vw~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~l~~~~~----dg-------~i~i~d~~~~~~~~~~--~ 130 (351)
+.|+. .+..||..+.+-... ...............++..++.|+. ++ .+..||..+.+....- .
T Consensus 20 ~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 97 (318)
T 2woz_A 20 LVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLP 97 (318)
T ss_dssp EECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBS
T ss_pred hcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCC
Confidence 44443 488999988764431 1111112222233456778888873 11 2778898876643321 1
Q ss_pred cCCCCeEEEEEccCCCEEEEEecCC----CCCeEEEEEccCCceeEEeccCCCCE--EEEEECCCCcEEEEEcC------
Q psy519 131 DHVSPVLSIAFSPCGKYLASGGTGS----YDKAVRLWSITDGASVRVFSDHVSPV--LSIAFSPCGKYLASGGE------ 198 (351)
Q Consensus 131 ~~~~~i~~~~~~~~~~~l~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~~------ 198 (351)
........+.+ ++.+++.|+... ....+.+||+.+.+=. .+.....+. .+++. .++++++.|+.
T Consensus 98 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 98 SARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp SCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSSCEESCEEEE-ETTEEEEECCEESSSCB
T ss_pred ccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCc
Confidence 11111222223 567777777511 0145888998765322 221111111 11222 36677777653
Q ss_pred CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeee
Q psy519 199 DGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLT-----GTVQFYGWPSASKIGI 258 (351)
Q Consensus 199 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~ 258 (351)
-..+.+||+.+.+-...-.......-.+++. -++++++.|+.+ ..+.+||..+.+-...
T Consensus 174 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC
T ss_pred cceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEEC
Confidence 2358999998765433222121111122222 256777777643 3578899887754443
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.48 E-value=0.33 Score=41.04 Aligned_cols=90 Identities=16% Similarity=0.106 Sum_probs=45.9
Q ss_pred CCcE-EEEeC-CCcEEEEeCCC--Ce--eeEEee-CCCCCeEEEEEeCCCCEEEEEeC-C---------CcEEEEeCCCC
Q psy519 61 KGLA-LTGSR-DTTARLWSLEQ--MY--PLRIFV-GHKQDVTCARFHPKITYIGTGSY-D---------KAVRLWSITDG 123 (351)
Q Consensus 61 ~~~~-~~~~~-d~~i~vw~~~~--~~--~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~-d---------g~i~i~d~~~~ 123 (351)
++++ +.|+. ...+.++|+.+ .+ .+..+. ........+.+ ++++++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4555 66654 34688889863 22 222222 11222222222 5667777765 2 46899999887
Q ss_pred ceeEEeccC--CCCeEEEEEccCCCEEEEEec
Q psy519 124 ASVRVFSDH--VSPVLSIAFSPCGKYLASGGT 153 (351)
Q Consensus 124 ~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~ 153 (351)
+....-... ...-.+++. .++++++.|+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 127 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGV 127 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECC
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCc
Confidence 643322111 111122222 46777788775
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.41 E-value=0.29 Score=45.79 Aligned_cols=187 Identities=13% Similarity=0.117 Sum_probs=100.0
Q ss_pred ccEEEEecCC----CceEEEecCCc----cC--------CCccceEEEEECC-CCcE-EEEeCC------CcEEEEeCCC
Q psy519 25 EDVLANLESQ----KNLQSRYLPYY----TS--------GHDMTVWSVEACS-KGLA-LTGSRD------TTARLWSLEQ 80 (351)
Q Consensus 25 ~~~l~~~~~~----~~i~i~~~~~~----~~--------~~~~~i~~~~~~~-~~~~-~~~~~d------~~i~vw~~~~ 80 (351)
+.+++.|+.+ ..+.+||..+. .. .....-.+++..+ ++++ +.|+.+ ..+.+||+.+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence 6777777753 45777877665 11 0111112233333 5666 777653 3578889887
Q ss_pred CeeeE--EeeCCCCCeEEEEEeCCCCEEEEEeCCC--cEEEEeCCCCceeEEec-----cCCCCeEEEEEccC-CCEEEE
Q psy519 81 MYPLR--IFVGHKQDVTCARFHPKITYIGTGSYDK--AVRLWSITDGASVRVFS-----DHVSPVLSIAFSPC-GKYLAS 150 (351)
Q Consensus 81 ~~~~~--~~~~~~~~i~~i~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~~~~-~~~l~~ 150 (351)
.+-.. .+....... +++...++..++.|+.++ .+.+||+.+.+....-. .......++.+..+ +.+++.
T Consensus 478 ~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 478 REWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 54322 221112222 223324778888887654 79999998876433221 11122233555555 667777
Q ss_pred EecCC----CCCeEEEEEccCCce-----eEEecc----CCCCEEEEEECCCCcEEEEEcC--------CCeEEEEEcCC
Q psy519 151 GGTGS----YDKAVRLWSITDGAS-----VRVFSD----HVSPVLSIAFSPCGKYLASGGE--------DGLVLTHELTT 209 (351)
Q Consensus 151 ~~~~~----~d~~i~i~d~~~~~~-----~~~~~~----~~~~i~~~~~~~~~~~l~~~~~--------dg~i~i~d~~~ 209 (351)
|+... ....+..||+.+.+- ...+.. ..... .++...++++++.|+. ...+.+||+.+
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 76421 125699999987761 122211 11112 2233334777777764 34588999887
Q ss_pred CcEE
Q psy519 210 GRVI 213 (351)
Q Consensus 210 ~~~~ 213 (351)
.+-.
T Consensus 636 ~~W~ 639 (695)
T 2zwa_A 636 ETLT 639 (695)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 6544
No 342
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.33 E-value=0.34 Score=39.59 Aligned_cols=218 Identities=13% Similarity=-0.008 Sum_probs=116.5
Q ss_pred ceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEe
Q psy519 13 HFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIF 87 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~ 87 (351)
.|..++.... ..++-. +|.++.|-.... .......|..++......++. . ||.++.|-....-++..-
T Consensus 25 ~i~~ia~G~~----h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF----HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSS----EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCC----eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 5666666533 323334 899999976654 111234677777655444444 4 899999986543222111
Q ss_pred eCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC
Q psy519 88 VGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD 167 (351)
Q Consensus 88 ~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~ 167 (351)
..-...|..++...+. .+.-. +|.|+.|-......+.........|..++.......++ . |+.++.|-...
T Consensus 98 ~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l---~---~G~v~~wG~n~ 168 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV---K---NGGVIAWGDNY 168 (282)
T ss_dssp GGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE---E---TTEEEEEECCT
T ss_pred cccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE---E---CCEEEEecCCC
Confidence 1113467777776543 33334 89999997654322222222335677776643322222 3 78888887544
Q ss_pred CceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy519 168 GASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQF 247 (351)
Q Consensus 168 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 247 (351)
...+..-......|..++-..+ ..++. .+|.++.|-......+- +.......|..++-..+. .++. . ||.++.
T Consensus 169 ~gqlg~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~h-~~al-~-~g~v~~ 241 (282)
T 3qhy_B 169 FGQTTVPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTT-VPTEALSGVSAIASGEWY-SLAL-K-NGKVIA 241 (282)
T ss_dssp TSTTSCCGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTC-CCGGGGSSCCEEEECSSC-EEEE-E-TTEEEE
T ss_pred CCCCCCceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCC-CCcccCCCceEEEcCCCE-EEEE-E-CCEEEE
Confidence 2211111112345777765433 33333 58999999764322111 111222456777654433 3333 3 899999
Q ss_pred EeCCCC
Q psy519 248 YGWPSA 253 (351)
Q Consensus 248 ~~~~~~ 253 (351)
|-....
T Consensus 242 wG~n~~ 247 (282)
T 3qhy_B 242 WGSSRT 247 (282)
T ss_dssp ESTTCC
T ss_pred ecCCCC
Confidence 976654
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.32 E-value=0.27 Score=45.92 Aligned_cols=192 Identities=12% Similarity=0.053 Sum_probs=103.3
Q ss_pred CCcE-EEEeCC----CcEEEEeCCCCeeeEEe-e-------CCCCCeEEEEEeC-CCCEEEEEeCC------CcEEEEeC
Q psy519 61 KGLA-LTGSRD----TTARLWSLEQMYPLRIF-V-------GHKQDVTCARFHP-KITYIGTGSYD------KAVRLWSI 120 (351)
Q Consensus 61 ~~~~-~~~~~d----~~i~vw~~~~~~~~~~~-~-------~~~~~i~~i~~~~-~~~~l~~~~~d------g~i~i~d~ 120 (351)
++.+ +.|+.+ ..+.+||+.+++-...- . ...... +++..+ ++..++.|+.+ ..+.+||+
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH-TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC-EEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce-EEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4555 777653 46888998876533222 1 111222 333333 67778887754 35889998
Q ss_pred CCCceeEEecc-CCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCceeEEecc------CCCCEEEEEECCC-CcE
Q psy519 121 TDGASVRVFSD-HVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASVRVFSD------HVSPVLSIAFSPC-GKY 192 (351)
Q Consensus 121 ~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~------~~~~i~~~~~~~~-~~~ 192 (351)
.+.+....-.. ....-.+++.-.++.+++.|+..... .+.+||..+.+ -..+.. .......+.+..+ +++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 87654332111 11111223332478888888762222 79999987753 222211 1122233555554 667
Q ss_pred EEEEcC--C-----CeEEEEEcCCCcE-----EEEeec---cCCCCEEEEEEcCCCCEEEEEeC--------CCeEEEEe
Q psy519 193 LASGGE--D-----GLVLTHELTTGRV-----ISRFHL---QEHEPVTSLVWSVTGETLVTGSL--------TGTVQFYG 249 (351)
Q Consensus 193 l~~~~~--d-----g~i~i~d~~~~~~-----~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~--------dg~i~i~~ 249 (351)
++.|+. + ..+.+||+.+.+. -..+.. ...... +++...++++++.|+. ...+.+||
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 777765 2 4588999987761 111211 111122 2333333677777764 34689999
Q ss_pred CCCCcee
Q psy519 250 WPSASKI 256 (351)
Q Consensus 250 ~~~~~~~ 256 (351)
..+.+-.
T Consensus 633 ~~t~~W~ 639 (695)
T 2zwa_A 633 PLSETLT 639 (695)
T ss_dssp TTTTEEE
T ss_pred CCCCeEE
Confidence 8877544
No 344
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.13 E-value=1.2 Score=44.14 Aligned_cols=218 Identities=11% Similarity=0.067 Sum_probs=117.7
Q ss_pred ceEEEEECCCCcEEEEeCCCcEEEEeCCCCeee--EEeeCCCCCeEEEEEeCC------CCEEEEEeC-CCcEEEEeCCC
Q psy519 52 TVWSVEACSKGLALTGSRDTTARLWSLEQMYPL--RIFVGHKQDVTCARFHPK------ITYIGTGSY-DKAVRLWSITD 122 (351)
Q Consensus 52 ~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~--~~~~~~~~~i~~i~~~~~------~~~l~~~~~-dg~i~i~d~~~ 122 (351)
.|...+.+. ..++.+. ++.+.++++..++.. ... .-...|.|+++.|. ++++++|.. |++++++++.+
T Consensus 515 ~I~~As~n~-~~vvva~-g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCNS-SQVVVAV-GRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEECS-SEEEEEE-TTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCC-CEEEEEE-CCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 455555443 3344443 678888887655322 121 23567999999763 468999996 99999999987
Q ss_pred CceeEEecc-CCCCeEEEEEcc--CCCEEEEEecCCCCCeEEEEEcc--CCceeEE--eccCCCCEEEEEECCCCcEEEE
Q psy519 123 GASVRVFSD-HVSPVLSIAFSP--CGKYLASGGTGSYDKAVRLWSIT--DGASVRV--FSDHVSPVLSIAFSPCGKYLAS 195 (351)
Q Consensus 123 ~~~~~~~~~-~~~~i~~~~~~~--~~~~l~~~~~~~~d~~i~i~d~~--~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~ 195 (351)
.+.+....- ......++.+.. ...+|..|-. ||.+.-+.+. ++..... ..-...++.-..+...+..-+.
T Consensus 592 l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~---dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~ 668 (1158)
T 3ei3_A 592 FELLHKEMLGGEIIPRSILMTTFESSHYLLCALG---DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVF 668 (1158)
T ss_dssp CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEET---TSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEE
T ss_pred CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeC---CCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEE
Confidence 665543321 122344444432 3456777777 8987666554 4433221 1122345544444444433233
Q ss_pred EcCCCeEEEEEcCCCcEEEEeeccCCCCE-EEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeee------eecceeEE
Q psy519 196 GGEDGLVLTHELTTGRVISRFHLQEHEPV-TSLVWSVT--GETLVTGSLTGTVQFYGWPSASKIGI------GVYPRCAA 266 (351)
Q Consensus 196 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v-~~~~~~~~--~~~l~~~~~dg~i~i~~~~~~~~~~~------~~~~~~~~ 266 (351)
+..+.-..+|.-+ ++.... .... ..+ ....|+.. ..-++..+ ++.++|..++..+.... ....++++
T Consensus 669 a~s~rp~liy~~~-~~l~~s-~l~~-~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y 744 (1158)
T 3ei3_A 669 ACSDRPTVIYSSN-HKLVFS-NVNL-KEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICY 744 (1158)
T ss_dssp EESSSCEEEEESS-SSEEEE-EBSS-SCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEE
T ss_pred EECCCCEEEEEcC-CceEEe-ccCh-HHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEE
Confidence 3334444455433 332221 1121 223 33345432 23454443 45699998876554433 34457889
Q ss_pred ecCCceeeeeecc
Q psy519 267 QPVGFEAATLAAN 279 (351)
Q Consensus 267 s~~~~~~~~~~~~ 279 (351)
+|..+.++++...
T Consensus 745 ~~~~~~~~v~~~~ 757 (1158)
T 3ei3_A 745 QEVSQCFGVLSSR 757 (1158)
T ss_dssp EGGGTEEEEEEEE
T ss_pred cCCCCEEEEEEEe
Confidence 9988876666543
No 345
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.066 Score=44.96 Aligned_cols=146 Identities=12% Similarity=0.100 Sum_probs=86.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCceeEEeccC-CCCeEEEEEc--c-CCCEEEEE-ecCCCCCeEEEEEccCCceeEEecc--
Q psy519 104 TYIGTGSYDKAVRLWSITDGASVRVFSDH-VSPVLSIAFS--P-CGKYLASG-GTGSYDKAVRLWSITDGASVRVFSD-- 176 (351)
Q Consensus 104 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~--~-~~~~l~~~-~~~~~d~~i~i~d~~~~~~~~~~~~-- 176 (351)
..++.++.||.|+-+|..+|+....++.. ..++....-. + ++..++.. .. ||.|..+|..+|.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~---dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFG---DGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCST---TTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECC---CCEEEEEECCCCcEEeeecccc
Confidence 47888999999999999999999888653 1222221100 1 22333332 35 99999999888754433321
Q ss_pred --CCCCEEE---EEE-C----CCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCE----E--EEEEc-----CCCCE
Q psy519 177 --HVSPVLS---IAF-S----PCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPV----T--SLVWS-----VTGET 235 (351)
Q Consensus 177 --~~~~i~~---~~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v----~--~~~~~-----~~~~~ 235 (351)
...++.. ... . ..+..+++|+.+|.+...|+++|+.+..+........ . +.... ..+..
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 2223321 001 0 1456788999999999999999999988864322110 0 11110 12456
Q ss_pred EEEEeCCCeEEEEeCCCC
Q psy519 236 LVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 236 l~~~~~dg~i~i~~~~~~ 253 (351)
++.+..+..+.+.+ +++
T Consensus 168 v~ig~~~y~v~~~~-~sG 184 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YDG 184 (339)
T ss_dssp EEEEEEEEECEECC-TTS
T ss_pred EEEecceEEEEEEC-CCC
Confidence 77777777777766 444
No 346
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.10 E-value=1.3 Score=44.04 Aligned_cols=235 Identities=13% Similarity=0.075 Sum_probs=131.2
Q ss_pred ccceEEeeecCCc----cccEEEEecC-CCceEEEecCCc-------cCC--CccceEEEEECCCCcE-EEEeCCCcEEE
Q psy519 11 HKHFIQNSFKPET----VEDVLANLES-QKNLQSRYLPYY-------TSG--HDMTVWSVEACSKGLA-LTGSRDTTARL 75 (351)
Q Consensus 11 ~~~v~~~~~sp~~----~~~~l~~~~~-~~~i~i~~~~~~-------~~~--~~~~i~~~~~~~~~~~-~~~~~d~~i~v 75 (351)
...|.|+++.|.. ..+++|.|.. |+++++++++.. +.. -...+.-+.+ ....+ ..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeEEE
Confidence 3578999998741 1368999986 999999999865 111 1122222333 12233 78888998766
Q ss_pred EeC--CCCeeeE--EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCe-EEEEEccC--CCEE
Q psy519 76 WSL--EQMYPLR--IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPV-LSIAFSPC--GKYL 148 (351)
Q Consensus 76 w~~--~~~~~~~--~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~--~~~l 148 (351)
+.+ .+++... ...-...++.-..+...+..-+.+..+....+|.-+ ++....-- ....+ ....|+.. .+-+
T Consensus 632 ~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l-~~~~v~~~~~F~se~~~~g~ 709 (1158)
T 3ei3_A 632 FGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNV-NLKEVNYMCPLNSDGYPDSL 709 (1158)
T ss_dssp EEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEB-SSSCCCEEEEECCSSSTTEE
T ss_pred EEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEecc-ChHHhceEeccCcccCCCcE
Confidence 554 3444321 112224456555555444333333334555555433 33221111 11223 23345432 1234
Q ss_pred EEEecCCCCCeEEEEEccCCce--eEEeccCCCCEEEEEECCCCcEEEEEcC----------------------------
Q psy519 149 ASGGTGSYDKAVRLWSITDGAS--VRVFSDHVSPVLSIAFSPCGKYLASGGE---------------------------- 198 (351)
Q Consensus 149 ~~~~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------------------------- 198 (351)
+... ++.++|..+..-+. ++.+ .-...++.++++|+.+.++.+..
T Consensus 710 v~~~----~~~LrI~~i~~~~~~~~~~i-pL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1158)
T 3ei3_A 710 ALAN----NSTLTIGTIDEIQKLHIRTV-PLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVS 784 (1158)
T ss_dssp EEEC----SSCEEEEEECCSSSEEEEEE-ECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEEC
T ss_pred EEEc----CCceEEEEecccCCeeEEEE-eCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccc
Confidence 4333 56688888754332 2223 23456788888887665544321
Q ss_pred ---------------------CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEc---CC-CCEEEEEe----------CCC
Q psy519 199 ---------------------DGLVLTHELTTGRVISRFHLQEHEPVTSLVWS---VT-GETLVTGS----------LTG 243 (351)
Q Consensus 199 ---------------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~---~~-~~~l~~~~----------~dg 243 (351)
-+.+++.|..+.+.+..+.+.....+.+++.- .+ ..++++|+ ..|
T Consensus 785 ~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~G 864 (1158)
T 3ei3_A 785 SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQG 864 (1158)
T ss_dssp CCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCE
T ss_pred ccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCce
Confidence 12477888888888888877776666666542 22 46888886 348
Q ss_pred eEEEEeCCCC
Q psy519 244 TVQFYGWPSA 253 (351)
Q Consensus 244 ~i~i~~~~~~ 253 (351)
.|.+|++..+
T Consensus 865 ri~vf~v~~~ 874 (1158)
T 3ei3_A 865 RIVVFQYSDG 874 (1158)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEECC
Confidence 8999999754
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.08 E-value=0.68 Score=40.73 Aligned_cols=105 Identities=10% Similarity=0.106 Sum_probs=62.2
Q ss_pred CCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCcee--EEecc------CCCCEEEEEECCC---CcEEEEEcC---
Q psy519 133 VSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGASV--RVFSD------HVSPVLSIAFSPC---GKYLASGGE--- 198 (351)
Q Consensus 133 ~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~~~--~~~~~------~~~~i~~~~~~~~---~~~l~~~~~--- 198 (351)
-.....|+|.|+|+++++-.. .+.|++++..+++.. ..+.. .......|+|+|+ +..|+++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~---gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERA---TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETT---TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCceEEEEcCCCcEEEEEcC---CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 345679999999997776432 347888886555432 22221 2456779999995 444444432
Q ss_pred ----------CCeEEEEEcCCC-------cEEE-EeeccCCCCEEEEEEcCCCCEEEEEe
Q psy519 199 ----------DGLVLTHELTTG-------RVIS-RFHLQEHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 199 ----------dg~i~i~d~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~ 240 (351)
...|.-+++..+ +.+. .+..........|+|.|||.+.++.+
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235655655332 1111 12212224578999999998777644
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.07 E-value=1 Score=42.59 Aligned_cols=221 Identities=10% Similarity=-0.004 Sum_probs=129.6
Q ss_pred cceEEeeecCCccccEEEEecCCCceEEEecCCc-cC----CCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEE
Q psy519 12 KHFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-TS----GHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRI 86 (351)
Q Consensus 12 ~~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-~~----~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~ 86 (351)
..|.++.-..+ |. |..|+.+| +..||.... +. .....|.++.. .+|.+..++.+ -+..++..+++....
T Consensus 63 ~~i~~i~~d~~--g~-lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~~~ 136 (758)
T 3ott_A 63 TRIYCGVIIDN--TY-LYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLTSF 136 (758)
T ss_dssp SCEEEEEEETT--TE-EEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEE
T ss_pred ceEEEEEEcCC--Cc-EEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEEEe
Confidence 46788777666 54 55555555 778887665 11 12235777654 46777555555 688899877654322
Q ss_pred ee----CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEecc-----CCCCeEEEEEccCCCEEEEEecCCCC
Q psy519 87 FV----GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSD-----HVSPVLSIAFSPCGKYLASGGTGSYD 157 (351)
Q Consensus 87 ~~----~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~~~~d 157 (351)
.. .....|.++....++.+.+ ++.+ -+..++..+++....... ....|.++...+++..|..+..
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~---- 210 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE---- 210 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE----
T ss_pred ccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC----
Confidence 01 1234688888877776554 4544 477888776653322111 1234888888877776666653
Q ss_pred CeEEEEEccCCceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeecc------CCCCEEEEEEcC
Q psy519 158 KAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQ------EHEPVTSLVWSV 231 (351)
Q Consensus 158 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~~v~~~~~~~ 231 (351)
+-+..+|..+++...........|.++...++|.+.+. +.+ -+.+++..+++........ ....|.++....
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~ 288 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQ 288 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECT
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcC
Confidence 46888997766432211112235788888777775554 444 5788887765433221100 124588998888
Q ss_pred CCCEEEEEeCCCeEEEE
Q psy519 232 TGETLVTGSLTGTVQFY 248 (351)
Q Consensus 232 ~~~~l~~~~~dg~i~i~ 248 (351)
+|.+.+ |+..| +.++
T Consensus 289 ~g~lWi-GT~~G-l~~~ 303 (758)
T 3ott_A 289 EHNIWL-GTDYG-ISLS 303 (758)
T ss_dssp TCCEEE-EESSS-EEEE
T ss_pred CCCEEE-EeCCc-cccc
Confidence 877544 44456 4444
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.19 E-value=1.5 Score=38.59 Aligned_cols=224 Identities=12% Similarity=0.043 Sum_probs=112.1
Q ss_pred ceEEeeecCCcccc-EEEEecCCCceEEEecCCc------------cC-----CCccceEEEEECCC----CcE-EEEeC
Q psy519 13 HFIQNSFKPETVED-VLANLESQKNLQSRYLPYY------------TS-----GHDMTVWSVEACSK----GLA-LTGSR 69 (351)
Q Consensus 13 ~v~~~~~sp~~~~~-~l~~~~~~~~i~i~~~~~~------------~~-----~~~~~i~~~~~~~~----~~~-~~~~~ 69 (351)
....|+|.|+ |+ +|+++...|.|++++.... .. ........|+|+|+ +.+ ++-+.
T Consensus 15 ~P~~~a~~pd--G~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 15 QPVGALHSGD--GSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SEEEEECCSS--SSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CceEEEECCC--CCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4478999999 86 4555567899999975422 00 11356788999996 544 44332
Q ss_pred --C----------CcEEEEeCCC----------CeeeEEee--CCCCCeEEEEEeCCCCEEEEEeCCC------------
Q psy519 70 --D----------TTARLWSLEQ----------MYPLRIFV--GHKQDVTCARFHPKITYIGTGSYDK------------ 113 (351)
Q Consensus 70 --d----------~~i~vw~~~~----------~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~dg------------ 113 (351)
+ ..|.-|.+.. .+.+..+. .....-..|+|.|||.+.++.+..+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~ 172 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGL 172 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCc
Confidence 1 1344455532 12222222 1122357899999998777766433
Q ss_pred -----cEEEEeCCCC------c-------------eeEEe-ccCCCCeEEEEEccC-----CC-EEEEEecCCCC-CeEE
Q psy519 114 -----AVRLWSITDG------A-------------SVRVF-SDHVSPVLSIAFSPC-----GK-YLASGGTGSYD-KAVR 161 (351)
Q Consensus 114 -----~i~i~d~~~~------~-------------~~~~~-~~~~~~i~~~~~~~~-----~~-~l~~~~~~~~d-~~i~ 161 (351)
.|.-.|.... . ....+ .+|. ....++|+|. |+ ++..+.....+ ..-.
T Consensus 173 ~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~R-Np~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~e 251 (463)
T 2wg3_C 173 SDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLH-DPGRCAVDRHPTDININLTILCSDSNGKNRSSAR 251 (463)
T ss_dssp CSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCS-SCCBEEEESSCSSTTCSEEEEEECC------CEE
T ss_pred CCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCC-CcceEEECCCCCCcccceEEEecccCCCCCCCCe
Confidence 2333343321 0 00111 1232 2356899996 34 34443210001 1123
Q ss_pred EEEccCC------ceeEEeccCC-CCEEEEEECC-------CCcEEEEEcCCCeEEEEEcCCCc---EEEEee-c-----
Q psy519 162 LWSITDG------ASVRVFSDHV-SPVLSIAFSP-------CGKYLASGGEDGLVLTHELTTGR---VISRFH-L----- 218 (351)
Q Consensus 162 i~d~~~~------~~~~~~~~~~-~~i~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~-~----- 218 (351)
|..+..+ .++..+..+. ..+..+.|-. .+.+|+.. ..+.|....+.... ....+. .
T Consensus 252 i~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~-~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~ 330 (463)
T 2wg3_C 252 ILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGD-RNGNFLTLQQSPVTKQWQEKPLCLGTSGSC 330 (463)
T ss_dssp EEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEE-TTSCEEEEEC-----CCEEEEECEEETTSS
T ss_pred EeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEec-CCCcEEEEEeCCCCceeeEEEeecCCcccc
Confidence 3333322 2344443321 4677777753 23445443 34666655554331 111110 0
Q ss_pred --cCCCCEEEEEEcCCCCEEEEEe
Q psy519 219 --QEHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 219 --~~~~~v~~~~~~~~~~~l~~~~ 240 (351)
.....+..+...|||.++++..
T Consensus 331 ~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 331 RGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp CSCCCSEEEEEEECTTCCEEEEEE
T ss_pred cccccCcceEEEECCCCCEEEEec
Confidence 1125689999999998877765
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.11 E-value=0.33 Score=43.33 Aligned_cols=103 Identities=17% Similarity=0.093 Sum_probs=70.2
Q ss_pred CCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCC------ce-------eEEeccCCCCEEEEEECCCCcEEEEEcCCC
Q psy519 134 SPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDG------AS-------VRVFSDHVSPVLSIAFSPCGKYLASGGEDG 200 (351)
Q Consensus 134 ~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~------~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 200 (351)
.....+..+|||+++++++.. +.++.++|++.- +. ..+.+ -.......+|.++|.-..+.--|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKL--sptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKL--SPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTT--SSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTT
T ss_pred CCCcceeeCCCCCEEEEcCCC--CCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecc
Confidence 344578899999999998764 889999998742 11 22232 234567889999996555666899
Q ss_pred eEEEEEcCCC----------cEEEEeeccCCCCEEEEEE------cCCCCEEEEEeC
Q psy519 201 LVLTHELTTG----------RVISRFHLQEHEPVTSLVW------SVTGETLVTGSL 241 (351)
Q Consensus 201 ~i~i~d~~~~----------~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~ 241 (351)
.|.-|++... ..+.++.. +-++-.+.- .|+|++|++...
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv--~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDV--HYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEEC--SSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred eEEEEeccHHHHHhcCccCCeeeecccc--ccCCcccccCCCccCCCCccEEEEecc
Confidence 9999998653 34444432 334444444 568999998753
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.68 E-value=2.4 Score=34.50 Aligned_cols=178 Identities=15% Similarity=-0.022 Sum_probs=94.2
Q ss_pred ceEEeeecCCccccEEEEecCCCceEEEecCCc-----cCCCccceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEe
Q psy519 13 HFIQNSFKPETVEDVLANLESQKNLQSRYLPYY-----TSGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIF 87 (351)
Q Consensus 13 ~v~~~~~sp~~~~~~l~~~~~~~~i~i~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~ 87 (351)
.|..++.... -. ++. . +|.++.|-.... ...-...|..++...+..++ -. +|.|+.|-.....++..-
T Consensus 64 ~i~~ia~G~~--hs-~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~a-l~-~G~v~~wG~n~~gqlg~~ 136 (282)
T 3qhy_B 64 GVDAIAAGNY--HS-LAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYA-LK-DGKVIAWGDDSDGQTTVP 136 (282)
T ss_dssp CCCEEEECSS--EE-EEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEE-EE-TTEEEEEECCTTSTTSCC
T ss_pred CEEEEEeCCC--EE-EEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEE-Ee-CCeEEEecCCCCCcCCCC
Confidence 4556665543 22 222 4 888988876654 11112467777765544443 34 899999976543222111
Q ss_pred eCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC
Q psy519 88 VGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD 167 (351)
Q Consensus 88 ~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~ 167 (351)
......|..++...+. .++ -. ||.++.|-......+.........|..++.... ..+.- . |+.++.|=...
T Consensus 137 ~~~~~~i~~i~~G~~~-~~~-l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~--hs~al-~---~G~v~~wG~n~ 207 (282)
T 3qhy_B 137 AEAQSGVTALDGGVYT-ALA-VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIF--HSLAL-K---DGKVIAWGDNR 207 (282)
T ss_dssp GGGGSSEEEEEECSSE-EEE-EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEE-E---TTEEEEEECCT
T ss_pred ccCCCCeEEEEcccCE-EEE-EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCC--EEEEE-E---CCeEEEEECCC
Confidence 1223457777665432 222 23 799999976543222211122356777776533 33333 5 89999997544
Q ss_pred CceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCC
Q psy519 168 GASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTT 209 (351)
Q Consensus 168 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 209 (351)
...+..-......|..++-... ..++.. ||.++.|-...
T Consensus 208 ~gqlg~p~~~~~~v~~i~~G~~-h~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 208 YKQTTVPTEALSGVSAIASGEW-YSLALK--NGKVIAWGSSR 246 (282)
T ss_dssp TSTTCCCGGGGSSCCEEEECSS-CEEEEE--TTEEEEESTTC
T ss_pred CCCCCCCcccCCCceEEEcCCC-EEEEEE--CCEEEEecCCC
Confidence 2212111111234666665433 333333 89999997544
No 352
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=88.91 E-value=8.8 Score=31.65 Aligned_cols=186 Identities=12% Similarity=0.025 Sum_probs=104.5
Q ss_pred CCcE-EEEeCCCcEEEEeCCCCeee---------EEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCC---C----
Q psy519 61 KGLA-LTGSRDTTARLWSLEQMYPL---------RIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITD---G---- 123 (351)
Q Consensus 61 ~~~~-~~~~~d~~i~vw~~~~~~~~---------~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~---~---- 123 (351)
+..+ ++.+.+|.|+--.+...+.. ..+.. .+.+..+........++..+..|.++-+.... .
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4444 77777888877655432211 11122 23344443433445666667788877665431 1
Q ss_pred --ce---eEEeccCCCCeEEEEEcc---CCCEEEEEecCCCCCeEEEEEccCC-------ceeEEeccCCCCEEEEEECC
Q psy519 124 --AS---VRVFSDHVSPVLSIAFSP---CGKYLASGGTGSYDKAVRLWSITDG-------ASVRVFSDHVSPVLSIAFSP 188 (351)
Q Consensus 124 --~~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~ 188 (351)
.+ ...+. ....|.++..-+ +..+++..+. +|.++...+..- .....+.. ...+..+....
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~---~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~ 160 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTA---SGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF 160 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEET---TSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEEC
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeC---CCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC
Confidence 11 11122 234455553332 4566777777 999998887432 11222333 44566665555
Q ss_pred CCcEEEEEcCCCeEEEEEcCC-------CcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy519 189 CGKYLASGGEDGLVLTHELTT-------GRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 189 ~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~ 252 (351)
+...++..+.+|.+..+.... .+-...+.+.....+.++..-.++..+++.+..|..+...+..
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 556777888899988887643 1223333344455677776655666788888899988887754
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.20 E-value=20 Score=34.86 Aligned_cols=37 Identities=11% Similarity=0.166 Sum_probs=32.2
Q ss_pred CeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCceeEEe
Q psy519 93 DVTCARFHPKITYIGTGSYDKAVRLWSITDGASVRVF 129 (351)
Q Consensus 93 ~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 129 (351)
.+.+++..++..++++-+.|+++++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677788888889999999999999999999987764
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.48 E-value=16 Score=31.06 Aligned_cols=186 Identities=8% Similarity=0.028 Sum_probs=110.1
Q ss_pred ccceEEEEECCCCcE-EEE-e--------------CCCcEEEEeCCCC--eeeEEeeCC------CCCeEEEEEe---CC
Q psy519 50 DMTVWSVEACSKGLA-LTG-S--------------RDTTARLWSLEQM--YPLRIFVGH------KQDVTCARFH---PK 102 (351)
Q Consensus 50 ~~~i~~~~~~~~~~~-~~~-~--------------~d~~i~vw~~~~~--~~~~~~~~~------~~~i~~i~~~---~~ 102 (351)
--.|..+...+.+++ +.= + .--.|.+||+.+. +.++.+.-. ...+..+++. |+
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 345777777777776 421 1 1125889999999 888777532 3457788887 22
Q ss_pred ----CCEEEEE-eCCCcEEEEeCCCCceeEEec----cC--------------CCCeEEEEEccC----CCEEEEEecCC
Q psy519 103 ----ITYIGTG-SYDKAVRLWSITDGASVRVFS----DH--------------VSPVLSIAFSPC----GKYLASGGTGS 155 (351)
Q Consensus 103 ----~~~l~~~-~~dg~i~i~d~~~~~~~~~~~----~~--------------~~~i~~~~~~~~----~~~l~~~~~~~ 155 (351)
+.+++.+ +..+.|.++|+.+++.-+.+. .. ...+..++++|+ ++.|.....
T Consensus 166 ~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl-- 243 (381)
T 3q6k_A 166 GDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG-- 243 (381)
T ss_dssp TTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES--
T ss_pred CCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC--
Confidence 3344433 346789999999887655441 00 247888999997 777776654
Q ss_pred CCCeEEEEEc-----cCC---ceeEEeccC--CCCEEEEEEC-CCCcEEEEEcCCCeEEEEEcCC-C---cEEEEee-cc
Q psy519 156 YDKAVRLWSI-----TDG---ASVRVFSDH--VSPVLSIAFS-PCGKYLASGGEDGLVLTHELTT-G---RVISRFH-LQ 219 (351)
Q Consensus 156 ~d~~i~i~d~-----~~~---~~~~~~~~~--~~~i~~~~~~-~~~~~l~~~~~dg~i~i~d~~~-~---~~~~~~~-~~ 219 (351)
.+ -++|.+ ++. ..++.+-.. ...-..+++. .+|.++++--+...|..|+... . +....+. -.
T Consensus 244 -ss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~ 321 (381)
T 3q6k_A 244 -SA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS 321 (381)
T ss_dssp -SC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT
T ss_pred -CC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC
Confidence 22 233333 222 122222111 2334456775 5788888888889999999865 1 1122221 11
Q ss_pred CCCCEEEEEEcCCCCEEEEE
Q psy519 220 EHEPVTSLVWSVTGETLVTG 239 (351)
Q Consensus 220 ~~~~v~~~~~~~~~~~l~~~ 239 (351)
.-.-+..+.+.++|.+.+..
T Consensus 322 ~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 322 RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp TCCSEEEEEECTTSCEEEEE
T ss_pred CccccCeEEECCCCeEEEEE
Confidence 11346777777666654444
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.08 E-value=19 Score=30.62 Aligned_cols=206 Identities=13% Similarity=-0.059 Sum_probs=100.1
Q ss_pred cEEEEecCCCceEEEecCC--c-c-----CCCccceEEEEECC--CCcEEEEeCCC----cEEEEeCC--CCeeeEE---
Q psy519 26 DVLANLESQKNLQSRYLPY--Y-T-----SGHDMTVWSVEACS--KGLALTGSRDT----TARLWSLE--QMYPLRI--- 86 (351)
Q Consensus 26 ~~l~~~~~~~~i~i~~~~~--~-~-----~~~~~~i~~~~~~~--~~~~~~~~~d~----~i~vw~~~--~~~~~~~--- 86 (351)
..|.++...| +.+++... . . ......|.+|++.| .+.+..+...+ .|...+-. +.+.+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPA 101 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCcccc
Confidence 3566666666 54454332 1 1 12235699999998 66675454444 34433211 1222211
Q ss_pred eeC--------CCCCeEEEEEeC-C-CCEEEEEeCCCcEEEEeCCCCceeEEecc-------------------CCCCeE
Q psy519 87 FVG--------HKQDVTCARFHP-K-ITYIGTGSYDKAVRLWSITDGASVRVFSD-------------------HVSPVL 137 (351)
Q Consensus 87 ~~~--------~~~~i~~i~~~~-~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------------~~~~i~ 137 (351)
+.. ....|.++++.| + ...++.+...+.|...+ ..++.-..+.. ....+.
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 110 112477888887 2 45566665556555543 22332222211 123578
Q ss_pred EEEEccC-CCEEEEEecCCCCCeEEEEEccCCceeEEeccC-------------CCCEEEEEECCC-CcEEEEEcCCCeE
Q psy519 138 SIAFSPC-GKYLASGGTGSYDKAVRLWSITDGASVRVFSDH-------------VSPVLSIAFSPC-GKYLASGGEDGLV 202 (351)
Q Consensus 138 ~~~~~~~-~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~-~~~l~~~~~dg~i 202 (351)
++.++|. ...++.+.. ++.|...+ ..++.-..+... ...+..+.++|+ ...++++...+ |
T Consensus 181 ~i~~d~~~~~~l~vg~~---~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l 255 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMS---SGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-I 255 (394)
T ss_dssp EEEECTTCTTCEEEEEE---TBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-E
T ss_pred EEEECCCCCCEEEEEEC---CCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-E
Confidence 8999883 445555544 45444432 233333332110 124889999985 45666666544 4
Q ss_pred EEEEcCCCcEEEEeeccC-C---CCEEEEEEcCC-CCEEEEE
Q psy519 203 LTHELTTGRVISRFHLQE-H---EPVTSLVWSVT-GETLVTG 239 (351)
Q Consensus 203 ~i~d~~~~~~~~~~~~~~-~---~~v~~~~~~~~-~~~l~~~ 239 (351)
...+ ..++.-..+.... . ..+..+.++|. ...|.++
T Consensus 256 ~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 256 YRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp EEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred EEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 4433 2333333332111 1 23567888763 3344444
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=84.02 E-value=5.8 Score=36.03 Aligned_cols=59 Identities=20% Similarity=0.215 Sum_probs=43.4
Q ss_pred EEEEEECCCCcEEEEEcCC------------CeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEE
Q psy519 181 VLSIAFSPCGKYLASGGED------------GLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTG 239 (351)
Q Consensus 181 i~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 239 (351)
.-.|+|+|.|.+++.-..+ ..+.+.+..+++....+..+....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4679999999966654322 3466677777776665555556789999999999988765
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=83.66 E-value=18 Score=30.07 Aligned_cols=154 Identities=12% Similarity=0.010 Sum_probs=88.6
Q ss_pred ccceEEEEECC---CCc-EEEEeCCCcEEEEeCCCCee-------eEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEE
Q psy519 50 DMTVWSVEACS---KGL-ALTGSRDTTARLWSLEQMYP-------LRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLW 118 (351)
Q Consensus 50 ~~~i~~~~~~~---~~~-~~~~~~d~~i~vw~~~~~~~-------~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~ 118 (351)
...|..+...+ +.. +++.+.+|.++--.+...+. ...+.. ...+..+........++..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 34455543332 344 49999999999988754221 122333 3455555555555677778889998888
Q ss_pred eCC--CCc---------eeEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCC-------ceeEEec--cCC
Q psy519 119 SIT--DGA---------SVRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDG-------ASVRVFS--DHV 178 (351)
Q Consensus 119 d~~--~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~-------~~~~~~~--~~~ 178 (351)
... .-. ....+. ....|.++...+.+..++..+. .|.++.-.+..- +-+..++ ...
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~---~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~ 248 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATS---GGYAKRTAIEEYPVQGRGGKGVLTVMYDRRR 248 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEET---TSEEEEEEGGGSCBCCTTSCCEESSCCCTTT
T ss_pred ECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeC---CCcEEEEEHHHccccCcCCCcEEEEEecCCC
Confidence 776 211 111122 3456777766666678888888 899988876432 1122222 213
Q ss_pred CCEEEEEECCCCcEEEEEcCCCeEEEEEcC
Q psy519 179 SPVLSIAFSPCGKYLASGGEDGLVLTHELT 208 (351)
Q Consensus 179 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 208 (351)
..+..+....+...++..+.+|.+.-++..
T Consensus 249 d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 249 GRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred CeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 345444444344455556667777667654
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.68 E-value=24 Score=30.92 Aligned_cols=102 Identities=12% Similarity=0.095 Sum_probs=60.8
Q ss_pred ceEEEEECCCCc--EEEEeCCCcEEEEeCCCCe---eeEEee---------CCCCCeEEEEEeCC----CCEEEEEeC--
Q psy519 52 TVWSVEACSKGL--ALTGSRDTTARLWSLEQMY---PLRIFV---------GHKQDVTCARFHPK----ITYIGTGSY-- 111 (351)
Q Consensus 52 ~i~~~~~~~~~~--~~~~~~d~~i~vw~~~~~~---~~~~~~---------~~~~~i~~i~~~~~----~~~l~~~~~-- 111 (351)
..+.|+|.|+|. ++++...|.|++++..... .+..+. ........|+++|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 467899999995 7778889999999754321 112111 11456789999996 333333221
Q ss_pred C----------CcEEEEeCCCC----------ceeEEec--cCCCCeEEEEEccCCCEEEEEec
Q psy519 112 D----------KAVRLWSITDG----------ASVRVFS--DHVSPVLSIAFSPCGKYLASGGT 153 (351)
Q Consensus 112 d----------g~i~i~d~~~~----------~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~ 153 (351)
+ ..|.-|.+..+ +.+..+. .....-..|+|.|||.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13444555421 1222221 12234678999999988877664
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=81.67 E-value=12 Score=33.87 Aligned_cols=61 Identities=18% Similarity=0.187 Sum_probs=42.8
Q ss_pred CEEEEEECCCCcEEEEEcC------------CCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCCCCEEEEEe
Q psy519 180 PVLSIAFSPCGKYLASGGE------------DGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVTGETLVTGS 240 (351)
Q Consensus 180 ~i~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 240 (351)
....|.|.++|.+.+.... .+.+..++..+++....+.......++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4678999999987774321 226777777777765544333346789999999999887754
No 360
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=81.24 E-value=36 Score=31.84 Aligned_cols=234 Identities=10% Similarity=-0.032 Sum_probs=124.1
Q ss_pred eEEee-ecCCccccEEEEec-----CCCceEEEecCCc--cCCC-ccce----------EEEEECCCCcEEEEe------
Q psy519 14 FIQNS-FKPETVEDVLANLE-----SQKNLQSRYLPYY--TSGH-DMTV----------WSVEACSKGLALTGS------ 68 (351)
Q Consensus 14 v~~~~-~sp~~~~~~l~~~~-----~~~~i~i~~~~~~--~~~~-~~~i----------~~~~~~~~~~~~~~~------ 68 (351)
...+. ++|+ +++++.+- ....++++|+.+. .... ...+ ..++|..++.++.+.
T Consensus 131 ~~g~~~~~~~--~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCFQN--PNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECSSS--TTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTC
T ss_pred EeceeecCCC--CCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCC
Confidence 34455 8999 98877642 2347999999887 1111 1011 334776444443321
Q ss_pred -----CCCcEEEEeCCCCe--eeEEeeCCCCCe-EEEEEeCCCC-----EEEEEeCC---CcEEEEeCCC--CceeEEec
Q psy519 69 -----RDTTARLWSLEQMY--PLRIFVGHKQDV-TCARFHPKIT-----YIGTGSYD---KAVRLWSITD--GASVRVFS 130 (351)
Q Consensus 69 -----~d~~i~vw~~~~~~--~~~~~~~~~~~i-~~i~~~~~~~-----~l~~~~~d---g~i~i~d~~~--~~~~~~~~ 130 (351)
....|+.|.+.+.. -...+.+....+ .....+++++ .+++.+.+ ..+++.|... ++.. .+.
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 287 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KIN 287 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECC
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-Eee
Confidence 23568888886542 233444443333 2344456655 24443322 4566667653 3322 232
Q ss_pred cCCCCeEEEEEccCCCEEEEEec-------CCCCCeEEEEEccCCc-------eeEE-ec-cCCCCEEEEEECCCCcEEE
Q psy519 131 DHVSPVLSIAFSPCGKYLASGGT-------GSYDKAVRLWSITDGA-------SVRV-FS-DHVSPVLSIAFSPCGKYLA 194 (351)
Q Consensus 131 ~~~~~i~~~~~~~~~~~l~~~~~-------~~~d~~i~i~d~~~~~-------~~~~-~~-~~~~~i~~~~~~~~~~~l~ 194 (351)
..... .+..+.++.+++.... ....+.|...|+.++. .... +. .....+..+.|..+ .+++
T Consensus 288 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 288 MPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp SCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEE
T ss_pred cCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEE
Confidence 12221 1334445555553311 0026789999987642 2232 32 23345778888865 5666
Q ss_pred EEcCCCe--EEEEEcCCCc-EEEE-eeccCCCCEEEEEEcCCCC-EEEEEeC---CCeEEEEeCCCCc
Q psy519 195 SGGEDGL--VLTHELTTGR-VISR-FHLQEHEPVTSLVWSVTGE-TLVTGSL---TGTVQFYGWPSAS 254 (351)
Q Consensus 195 ~~~~dg~--i~i~d~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~---dg~i~i~~~~~~~ 254 (351)
+...++. +.++|+.++. .... +.+.....+.....++++. ++++.+. -+.+..+|+. ++
T Consensus 365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~ 431 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE 431 (711)
T ss_dssp EEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC
T ss_pred EEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc
Confidence 6666664 6777776664 2333 4333345677677777765 4444333 3678888887 44
No 361
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=77.93 E-value=28 Score=28.64 Aligned_cols=180 Identities=11% Similarity=0.037 Sum_probs=102.1
Q ss_pred CCccccEEEEecCCCceEEEecCCcc--------------CCCccceEEEEECCCCcEEEEeCCCcEEEEeCCC---C--
Q psy519 21 PETVEDVLANLESQKNLQSRYLPYYT--------------SGHDMTVWSVEACSKGLALTGSRDTTARLWSLEQ---M-- 81 (351)
Q Consensus 21 p~~~~~~l~~~~~~~~i~i~~~~~~~--------------~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~~~---~-- 81 (351)
|+ .+++++.+.+|.|+--.+.... .....-+..+..+....++..+..|.++-..... .
T Consensus 6 ~~--e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QK--ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp ----CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred CC--CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 45 7788888999999877664431 1112222222233333446667777766554421 1
Q ss_pred ----eee---EEeeCCCCCeEEEEEeC---CCCEEEEEeCCCcEEEEeCCCC-------ceeEEeccCCCCeEEEEEccC
Q psy519 82 ----YPL---RIFVGHKQDVTCARFHP---KITYIGTGSYDKAVRLWSITDG-------ASVRVFSDHVSPVLSIAFSPC 144 (351)
Q Consensus 82 ----~~~---~~~~~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~ 144 (351)
.++ -.+. ..+.|.++...+ +..+++..+..|.++...+... .....+.. .+.+..+.....
T Consensus 84 ~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~ 161 (312)
T 1suu_A 84 ASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFK 161 (312)
T ss_dssp ----CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECT
T ss_pred cCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCC
Confidence 110 0121 234455554333 4567888899999998887432 22223333 456666655555
Q ss_pred CCEEEEEecCCCCCeEEEEEccCC---------ceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcC
Q psy519 145 GKYLASGGTGSYDKAVRLWSITDG---------ASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELT 208 (351)
Q Consensus 145 ~~~l~~~~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 208 (351)
+..++..+. +|.+..+....- .....+. ....+..+..-+++..+++.+..|..+..++.
T Consensus 162 ~~~i~l~T~---~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 162 DEKVICLSK---KGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp TCEEEEEET---TSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEeC---CCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 566777777 899998887531 1111222 23456666555556677788888988888874
No 362
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=77.57 E-value=29 Score=28.75 Aligned_cols=222 Identities=13% Similarity=0.052 Sum_probs=119.4
Q ss_pred ccEEEEecCCCceEEEecCCc-------------cCCCccceEEEE-ECCCCcEEEEeCCCcEEEE---eCCC------C
Q psy519 25 EDVLANLESQKNLQSRYLPYY-------------TSGHDMTVWSVE-ACSKGLALTGSRDTTARLW---SLEQ------M 81 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-------------~~~~~~~i~~~~-~~~~~~~~~~~~d~~i~vw---~~~~------~ 81 (351)
.+.+++.+.+|.|+--.+... .....+.+..+. -+....++.-+..|.++-. ++.. |
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 567788888888886543221 111122333332 2333344555666665544 3332 2
Q ss_pred eeeEEee--CCCCCeEEEEEeC---CCCEEEEEeCCCcEEEEeCCCCc-------eeEEeccCCCCeEEEEEccCCCEEE
Q psy519 82 YPLRIFV--GHKQDVTCARFHP---KITYIGTGSYDKAVRLWSITDGA-------SVRVFSDHVSPVLSIAFSPCGKYLA 149 (351)
Q Consensus 82 ~~~~~~~--~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~ 149 (351)
.++..+- ...+.|..+..-+ +...+++.+.+|.++--.+.... ....++. .+.+..+........++
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLL 161 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEE
Confidence 2221111 2345566654433 46789999999999998875422 1122333 45555555555556676
Q ss_pred EEecCCCCCeEEEEEcc--CC----c-----eeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCC-------c
Q psy519 150 SGGTGSYDKAVRLWSIT--DG----A-----SVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTG-------R 211 (351)
Q Consensus 150 ~~~~~~~d~~i~i~d~~--~~----~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~ 211 (351)
..+. .|.+..+... .- + ....+. ....|..+...+++..++..+..|.++.-.+..- +
T Consensus 162 l~T~---~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~ 237 (327)
T 3uc1_A 162 LVSA---NGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGK 237 (327)
T ss_dssp EEET---TSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred EEEC---CCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCC
Confidence 6667 8988888766 21 1 111122 2345767666666678888889999888775321 2
Q ss_pred EEEEeeccC-CCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy519 212 VISRFHLQE-HEPVTSLVWSVTGETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 212 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~ 251 (351)
-+..+.+.. ...+..+....+...++..+.+|.+.-++..
T Consensus 238 G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 238 GVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 222222222 2334444433344455555666666655544
No 363
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=77.20 E-value=33 Score=29.07 Aligned_cols=187 Identities=11% Similarity=0.021 Sum_probs=101.8
Q ss_pred CCCcE-EEEeCCCcEEEEeCCC---------CeeeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeC---CC----
Q psy519 60 SKGLA-LTGSRDTTARLWSLEQ---------MYPLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSI---TD---- 122 (351)
Q Consensus 60 ~~~~~-~~~~~d~~i~vw~~~~---------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~---~~---- 122 (351)
|+..+ ++.+.+|.|+--.+.+ +.....++ ....+..+........++..+..|.++-+.. +.
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 45555 7778888887654421 11112222 2344555555445556666667777666553 22
Q ss_pred --CceeEE---eccCCCCeEEEEEcc---CCCEEEEEecCCCCCeEEEEEccCCc-------eeEEeccCCCCEEEEEEC
Q psy519 123 --GASVRV---FSDHVSPVLSIAFSP---CGKYLASGGTGSYDKAVRLWSITDGA-------SVRVFSDHVSPVLSIAFS 187 (351)
Q Consensus 123 --~~~~~~---~~~~~~~i~~~~~~~---~~~~l~~~~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~ 187 (351)
|.++.. +. ....|.++..-+ ++.+++.++. .|.++...+.... ....++. ...+..+...
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~---~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~ 158 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATR---NGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALT 158 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEET---TSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEE
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeC---CCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEe
Confidence 222111 22 234555554332 3567888888 9999998864321 1112222 3445555555
Q ss_pred CCCcEEEEEcCCCeEEEEEcCCC-------cEEEEeeccCCCCEEEEEEcC-----------------------------
Q psy519 188 PCGKYLASGGEDGLVLTHELTTG-------RVISRFHLQEHEPVTSLVWSV----------------------------- 231 (351)
Q Consensus 188 ~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~v~~~~~~~----------------------------- 231 (351)
.+...++..+.+|.+..++...- +-++-+.+.....|.++...+
T Consensus 159 ~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 238 (370)
T 3l6v_A 159 DGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVI 238 (370)
T ss_dssp CSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC---------------------------
T ss_pred CCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccc
Confidence 55556777778888877775421 122333334445566555444
Q ss_pred ------CCCEEEEEeCCCeEEEEeCCC
Q psy519 232 ------TGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 232 ------~~~~l~~~~~dg~i~i~~~~~ 252 (351)
++..+++.+..|..+...+..
T Consensus 239 ~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 239 DVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp --------CEEEEEETTSEEEEEEGGG
T ss_pred ccccccCCceEEEeeCCCCEEEEEHHH
Confidence 345788888888888777653
No 364
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=76.91 E-value=33 Score=29.02 Aligned_cols=180 Identities=13% Similarity=0.020 Sum_probs=87.4
Q ss_pred CCcEEEEeCCCcEEEEeCCC-C---eeeEEeeCCCCCeEEEEEeC-CCCEEEEEeCCC----cEEEEeCCCCceeEEecc
Q psy519 61 KGLALTGSRDTTARLWSLEQ-M---YPLRIFVGHKQDVTCARFHP-KITYIGTGSYDK----AVRLWSITDGASVRVFSD 131 (351)
Q Consensus 61 ~~~~~~~~~d~~i~vw~~~~-~---~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~ 131 (351)
++.+..+...| +.+++... + +.... ......|.+|++.| +...+.+++..| .|...+ ..++.-..+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGP-VFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEE-ESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCc-cCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCc
Confidence 44566666666 55554332 2 22211 12345689999998 333444444444 344332 23332222211
Q ss_pred --------------CCCCeEEEEEccC--CCEEEEEecCCCCCeEEEEEccCCceeEEecc-------------------
Q psy519 132 --------------HVSPVLSIAFSPC--GKYLASGGTGSYDKAVRLWSITDGASVRVFSD------------------- 176 (351)
Q Consensus 132 --------------~~~~i~~~~~~~~--~~~l~~~~~~~~d~~i~i~d~~~~~~~~~~~~------------------- 176 (351)
....|.++++.|. ...+.++.. .+.|...+ ..++.-..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~---~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS---PQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE---TTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEec---CCcEEEEc-CCCCCeEECcCccCCccccccccccccCCC
Confidence 1124778999872 455666555 56555443 23333333211
Q ss_pred CCCCEEEEEECC-CCcEEEEEcCCCeEEEEEcCCCcEEEEeeccC------------CCCEEEEEEcCC-CCEEEEEeCC
Q psy519 177 HVSPVLSIAFSP-CGKYLASGGEDGLVLTHELTTGRVISRFHLQE------------HEPVTSLVWSVT-GETLVTGSLT 242 (351)
Q Consensus 177 ~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~v~~~~~~~~-~~~l~~~~~d 242 (351)
....+..+.++| +...++++..++.|...+ ..++.-..+.... ...+..+.++|+ ...|.++...
T Consensus 175 ~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 175 DGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT
T ss_pred CCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC
Confidence 123578899988 344455554444444332 2233222221100 124889999985 4566666654
Q ss_pred CeEEEEe
Q psy519 243 GTVQFYG 249 (351)
Q Consensus 243 g~i~i~~ 249 (351)
+ |...+
T Consensus 254 g-l~~s~ 259 (394)
T 3b7f_A 254 G-IYRMD 259 (394)
T ss_dssp E-EEEEE
T ss_pred e-EEEeC
Confidence 4 44443
No 365
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=76.80 E-value=49 Score=30.91 Aligned_cols=199 Identities=11% Similarity=0.039 Sum_probs=103.9
Q ss_pred ceEEEE-ECCCCcE--EEEeCC----CcEEEEeCCCCeeeEE-ee-CCCC------CeEEEEEeCCCCEEEEEe------
Q psy519 52 TVWSVE-ACSKGLA--LTGSRD----TTARLWSLEQMYPLRI-FV-GHKQ------DVTCARFHPKITYIGTGS------ 110 (351)
Q Consensus 52 ~i~~~~-~~~~~~~--~~~~~d----~~i~vw~~~~~~~~~~-~~-~~~~------~i~~i~~~~~~~~l~~~~------ 110 (351)
....+. ++|++++ ++-+.. ..++++|+.+++.+.. +. ..+. ....++|..+ ..++.+.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTC
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCC
Confidence 344555 8899876 333333 4599999999886631 21 0000 1134478643 3444332
Q ss_pred -----CCCcEEEEeCCCCc--eeEEeccCCCC-eEEEEEccCCCE-----EEEEecCCCCCeEEEEEccCC-ceeEEecc
Q psy519 111 -----YDKAVRLWSITDGA--SVRVFSDHVSP-VLSIAFSPCGKY-----LASGGTGSYDKAVRLWSITDG-ASVRVFSD 176 (351)
Q Consensus 111 -----~dg~i~i~d~~~~~--~~~~~~~~~~~-i~~~~~~~~~~~-----l~~~~~~~~d~~i~i~d~~~~-~~~~~~~~ 176 (351)
....|+.|.+-+.. -...+.+.... -.....++++++ +++.+.......+.+.|.... .....+..
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 288 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINM 288 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCS
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeec
Confidence 12468888876543 22334333232 334556667663 443332222356777776542 12233322
Q ss_pred CCCCEEEEEECCCCcEEEEE----------cCCCeEEEEEcCCCc-------EEEE-eeccCCCCEEEEEEcCCCCEEEE
Q psy519 177 HVSPVLSIAFSPCGKYLASG----------GEDGLVLTHELTTGR-------VISR-FHLQEHEPVTSLVWSVTGETLVT 238 (351)
Q Consensus 177 ~~~~i~~~~~~~~~~~l~~~----------~~dg~i~i~d~~~~~-------~~~~-~~~~~~~~v~~~~~~~~~~~l~~ 238 (351)
.... .+..++++.+++.. ...+.|...|+.++. .... +.......+..+.|..+ .++++
T Consensus 289 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 289 PSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLA 365 (711)
T ss_dssp CTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEE
T ss_pred CCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEE
Confidence 2221 12334456555532 136778889987632 1222 32233356788899865 56677
Q ss_pred EeCCC--eEEEEeCCCCc
Q psy519 239 GSLTG--TVQFYGWPSAS 254 (351)
Q Consensus 239 ~~~dg--~i~i~~~~~~~ 254 (351)
...++ .+.++++.+++
T Consensus 366 ~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 366 TYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEETTEEEEEEECEETTE
T ss_pred EEECCEEEEEEEECCCCc
Confidence 66676 46777776653
No 366
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=74.00 E-value=37 Score=28.11 Aligned_cols=187 Identities=10% Similarity=0.051 Sum_probs=101.6
Q ss_pred CCCcE-EEEeCCCcEEEEeCCCCe----eeEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeC---CC------Cce
Q psy519 60 SKGLA-LTGSRDTTARLWSLEQMY----PLRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSI---TD------GAS 125 (351)
Q Consensus 60 ~~~~~-~~~~~d~~i~vw~~~~~~----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~---~~------~~~ 125 (351)
|+..+ ++.+.+|.|+--.+...+ ....+... +.+..+........|+..+..|.++-+.. +. |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 34444 777778887766543211 11122222 33434433334456666677887666654 22 221
Q ss_pred eEE---eccCCCCeEEE-EEcc--CCCEEEEEecCCCCCeEEEEEccCC------ceeE--EeccCCCCEEEEEECCCCc
Q psy519 126 VRV---FSDHVSPVLSI-AFSP--CGKYLASGGTGSYDKAVRLWSITDG------ASVR--VFSDHVSPVLSIAFSPCGK 191 (351)
Q Consensus 126 ~~~---~~~~~~~i~~~-~~~~--~~~~l~~~~~~~~d~~i~i~d~~~~------~~~~--~~~~~~~~i~~~~~~~~~~ 191 (351)
+.. +. ....|.++ ...+ ++.+++.++. +|.++-..+..- +-+. .+.. ...+..+.......
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~---~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~ 156 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTR---NGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMN 156 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEET---TSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCS
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeC---CCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCC
Confidence 111 22 23445554 3332 2567888888 999999887422 1121 2222 24555555555556
Q ss_pred EEEEEcCCCeEEEEEcCC-------CcEEEEeeccCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCC
Q psy519 192 YLASGGEDGLVLTHELTT-------GRVISRFHLQEHEPVTSLVWSVTGE-TLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 192 ~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~~~~~ 252 (351)
.++..+.+|.+..+.... .+-+.-+.+.....|.++..-+++. .+++.+..|..+..++..
T Consensus 157 ~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 677788889888887642 2223333344445666665544444 777888888877776653
No 367
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=73.78 E-value=36 Score=27.89 Aligned_cols=178 Identities=12% Similarity=0.072 Sum_probs=97.4
Q ss_pred ccEEEEecCCCceEEEecCCc--cC------------CCccceEEEEECCCCcEEEEeCCCcEEEEeC---CC------C
Q psy519 25 EDVLANLESQKNLQSRYLPYY--TS------------GHDMTVWSVEACSKGLALTGSRDTTARLWSL---EQ------M 81 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~--~~------------~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~---~~------~ 81 (351)
.+.+++.+.+|.|+--.+... .. ....-+..+..+....++..+..|.++-+.. .. |
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G 82 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARG 82 (307)
T ss_dssp CEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCC
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCC
Confidence 678888899999977666543 11 1112222222333344456666676554443 22 2
Q ss_pred eeeEEe-e-CCCCCeEEEEEe---CCCCEEEEEeCCCcEEEEeCCCCc-------eeEEeccCCCCeEEEEEccCCCEEE
Q psy519 82 YPLRIF-V-GHKQDVTCARFH---PKITYIGTGSYDKAVRLWSITDGA-------SVRVFSDHVSPVLSIAFSPCGKYLA 149 (351)
Q Consensus 82 ~~~~~~-~-~~~~~i~~i~~~---~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~ 149 (351)
.++..+ . ...+.|.++..- .+..+++..+..|.++--.+.... ....+... +.+..+........++
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~ 161 (307)
T 1zi0_A 83 RPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVM 161 (307)
T ss_dssp EEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEE
T ss_pred eEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEE
Confidence 222111 1 234456665442 345678888999999998764221 11223333 5555555544455566
Q ss_pred EEecCCCCCeEEEEEccCCc-------eeE--EeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEc
Q psy519 150 SGGTGSYDKAVRLWSITDGA-------SVR--VFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHEL 207 (351)
Q Consensus 150 ~~~~~~~d~~i~i~d~~~~~-------~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 207 (351)
..+. +|.+..++...-. -.. .+. ....|..+...+++..+++.+..|..+-.++
T Consensus 162 l~T~---~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 162 LFSA---EGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEET---TSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EECC---CCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 6666 8888888764311 111 122 2345666655555667888888898888776
No 368
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=73.24 E-value=23 Score=31.94 Aligned_cols=60 Identities=15% Similarity=0.029 Sum_probs=42.6
Q ss_pred cceEEEEECCCCcE-EEEeC------------CCcEEEEeCCCCeeeEEeeCC-CCCeEEEEEeCCCCEEEEEe
Q psy519 51 MTVWSVEACSKGLA-LTGSR------------DTTARLWSLEQMYPLRIFVGH-KQDVTCARFHPKITYIGTGS 110 (351)
Q Consensus 51 ~~i~~~~~~~~~~~-~~~~~------------d~~i~vw~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~l~~~~ 110 (351)
.....|.|.++|.+ +.... ...+..++..+++....+... ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999988 52221 125777777778766666543 35689999999999887763
No 369
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=71.47 E-value=41 Score=27.55 Aligned_cols=185 Identities=12% Similarity=0.044 Sum_probs=101.6
Q ss_pred CCcE-EEEeCCCcEEEEeCCCCeeeE---------EeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeC---CC-----
Q psy519 61 KGLA-LTGSRDTTARLWSLEQMYPLR---------IFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSI---TD----- 122 (351)
Q Consensus 61 ~~~~-~~~~~d~~i~vw~~~~~~~~~---------~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~---~~----- 122 (351)
+..+ ++.+.+|.|+--.+.+.+..+ .+.. .+.+..+........|+..+..|.++-+.. +.
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 3344 788899999877765432211 1222 233433333334456666677888666654 22
Q ss_pred -CceeE---EeccCCCCeEEEEEc---cCCCEEEEEecCCCCCeEEEEEccCCc-----eeE--EeccCCCCEEEEEECC
Q psy519 123 -GASVR---VFSDHVSPVLSIAFS---PCGKYLASGGTGSYDKAVRLWSITDGA-----SVR--VFSDHVSPVLSIAFSP 188 (351)
Q Consensus 123 -~~~~~---~~~~~~~~i~~~~~~---~~~~~l~~~~~~~~d~~i~i~d~~~~~-----~~~--~~~~~~~~i~~~~~~~ 188 (351)
|.++. .+. ....|.++..- +++.+++..+. +|.++-..+..-. -+. .+... ..+..+....
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~---~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~ 155 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATA---NGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTS 155 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEET---TSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEEC
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeC---CCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeC
Confidence 22211 122 33456655432 34567777778 9999998774211 111 12233 4555555554
Q ss_pred CCcEEEEEcCCCeEEEEEcCCC-------cEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy519 189 CGKYLASGGEDGLVLTHELTTG-------RVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWP 251 (351)
Q Consensus 189 ~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~ 251 (351)
+...++..+.+|.+..++...- +-..-+.+.....|.++...+++..+++.+..|..+-.++.
T Consensus 156 ~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 156 GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 5556777778888887776421 12222334445567777655556678888888888887764
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=71.27 E-value=39 Score=27.19 Aligned_cols=180 Identities=11% Similarity=-0.021 Sum_probs=98.1
Q ss_pred cEEEEeCCCcEEEEe---CCCCeeeEEeeCCCCCeEEEEEeC--CCCEEEEEeCCCcEEEEeCCCCc------eeEEecc
Q psy519 63 LALTGSRDTTARLWS---LEQMYPLRIFVGHKQDVTCARFHP--KITYIGTGSYDKAVRLWSITDGA------SVRVFSD 131 (351)
Q Consensus 63 ~~~~~~~d~~i~vw~---~~~~~~~~~~~~~~~~i~~i~~~~--~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~ 131 (351)
.++.-+..|.++--. +...+....+ ...+.|..+.. + +...++..+.+|.++-..+.... ....++
T Consensus 37 ~ll~fT~~G~v~~~~~~~lp~~~~~~ll-~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk- 113 (276)
T 3no0_A 37 GLFLVSNRGRVYWIAGSQALQGSKVSLK-SREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT- 113 (276)
T ss_dssp CEEEEETTSEEEEECSHHHHTSEECCCS-STTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-
T ss_pred EEEEEcCCCeEEEEEhhhCccCcccccC-CCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-
Confidence 445556666655433 2222111112 23556666644 4 45788899999999999875432 112233
Q ss_pred CCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC---------CceeEEeccCCCCEEEEEECCCCcEEEEEcCCCeE
Q psy519 132 HVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD---------GASVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLV 202 (351)
Q Consensus 132 ~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 202 (351)
..+.+..+........++..+. .|.+..++... |.....+.. ...|..+...+++..++..+..|.+
T Consensus 114 egD~l~~~~~~~~~~~ill~T~---~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~ 189 (276)
T 3no0_A 114 EGDEVVSIASSVDETHILLFTK---KGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRV 189 (276)
T ss_dssp TTCCEEEEEECCSSCEEEEEET---TSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCE
T ss_pred CCCEEEEEEEeCCCCEEEEEEC---CCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcE
Confidence 2356666666555667777777 89988887532 111112222 3456665555566688888889988
Q ss_pred EEEEcCC-------CcEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEE--EeCC
Q psy519 203 LTHELTT-------GRVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQF--YGWP 251 (351)
Q Consensus 203 ~i~d~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i--~~~~ 251 (351)
+...+.. ++-+..+ .....+..+....+...++..+.+|.+.. ++..
T Consensus 190 kr~~~~e~~~~~R~gkGv~~i--~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 190 KKISHEEIPKTNRGVKGTEVS--GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEGGGSCCCCTTCCCEECC--CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEeEHHHcccCCCCCcceEEE--cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 8887642 1222222 12233444433333344555566666655 5543
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.76 E-value=19 Score=35.79 Aligned_cols=37 Identities=16% Similarity=-0.023 Sum_probs=28.8
Q ss_pred ceEEEEECCCCcE-EEEeCCCcEEEEeCCCCeeeEEee
Q psy519 52 TVWSVEACSKGLA-LTGSRDTTARLWSLEQMYPLRIFV 88 (351)
Q Consensus 52 ~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~~~~~~~ 88 (351)
.+.+++..++..+ ++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3444555566667 899999999999999999887653
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=66.57 E-value=49 Score=26.58 Aligned_cols=156 Identities=15% Similarity=0.047 Sum_probs=90.9
Q ss_pred CCeEEEEEeCCCCEEEEEeCCCcEEEEeC---CCCceeEEeccCCCCeEEEEEcc-CCCEEEEEecCCCCCeEEEEEccC
Q psy519 92 QDVTCARFHPKITYIGTGSYDKAVRLWSI---TDGASVRVFSDHVSPVLSIAFSP-CGKYLASGGTGSYDKAVRLWSITD 167 (351)
Q Consensus 92 ~~i~~i~~~~~~~~l~~~~~dg~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~d~~i~i~d~~~ 167 (351)
+.+..+........|+.-+..|.++--.+ ........+. ....|..+.... +..+++..+. +|.++-..+..
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~---~G~iKr~~l~~ 99 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATK---KGYVKKIPLAE 99 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEET---TSEEEEEEGGG
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeC---CCEEEEEEHHH
Confidence 34444444333445555566777665443 2221111133 355666664421 4678888888 99999998755
Q ss_pred Cc------eeEEeccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCC-------cEEEEeeccCCCCEEEEEEcCCCC
Q psy519 168 GA------SVRVFSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTG-------RVISRFHLQEHEPVTSLVWSVTGE 234 (351)
Q Consensus 168 ~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~ 234 (351)
-. ....++. ...+..+........++..+..|.++.+....- +-...+.+.....|..+...+++.
T Consensus 100 ~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 100 FEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEP 178 (276)
T ss_dssp TTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCS
T ss_pred hhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCC
Confidence 32 1111222 345666656655667888888898888875321 112223344446677766656677
Q ss_pred EEEEEeCCCeEEEEeCCC
Q psy519 235 TLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 235 ~l~~~~~dg~i~i~~~~~ 252 (351)
.++..+..|.++...+..
T Consensus 179 ~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEE 196 (276)
T ss_dssp EEEEEETTSCEEEEEGGG
T ss_pred EEEEEeCCCcEEEeEHHH
Confidence 888888999888887654
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=64.85 E-value=28 Score=31.60 Aligned_cols=59 Identities=20% Similarity=0.049 Sum_probs=42.2
Q ss_pred eEEEEEeCCCCEEEEEeCC------------CcEEEEeCCCCceeEEecc-CCCCeEEEEEccCCCEEEEEe
Q psy519 94 VTCARFHPKITYIGTGSYD------------KAVRLWSITDGASVRVFSD-HVSPVLSIAFSPCGKYLASGG 152 (351)
Q Consensus 94 i~~i~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~ 152 (351)
.-.|+|+|.|++++.-..+ ..+.+.+..+++..+.+.. ....++.++|+||++.|++.-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4678999999866654322 2356667777776666544 357899999999999887764
No 374
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=64.72 E-value=59 Score=26.85 Aligned_cols=182 Identities=12% Similarity=0.051 Sum_probs=101.9
Q ss_pred CCccccEEEEecCCCceEEEecCCc---------cCCCccceEEEEECCCCcEEEEeCCCcEEEEeC---C------CCe
Q psy519 21 PETVEDVLANLESQKNLQSRYLPYY---------TSGHDMTVWSVEACSKGLALTGSRDTTARLWSL---E------QMY 82 (351)
Q Consensus 21 p~~~~~~l~~~~~~~~i~i~~~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~---~------~~~ 82 (351)
|+ .+.+++.+.+|.|+--.+... +.....-+..+..+....++..+..|.++-+.. . .|.
T Consensus 3 ~~--e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 3 AS--EDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp SC--CEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred cC--CcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCc
Confidence 55 778888899999986654422 223333333444444455577777777665543 2 122
Q ss_pred eeEEe-e-CCCCCeEEEEEeC---CCCEEEEEeCCCcEEEEeCCCCc------eeE--EeccCCCCeEEEEEccCCCEEE
Q psy519 83 PLRIF-V-GHKQDVTCARFHP---KITYIGTGSYDKAVRLWSITDGA------SVR--VFSDHVSPVLSIAFSPCGKYLA 149 (351)
Q Consensus 83 ~~~~~-~-~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~~------~~~--~~~~~~~~i~~~~~~~~~~~l~ 149 (351)
++..+ . ...+.|.++..-+ ++.+++..+.+|.++-..+.... -+. .+.. .+.+..+........++
T Consensus 81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEE
T ss_pred ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEE
Confidence 22111 1 1234566543333 25678889999999998874221 111 2332 35565555554555666
Q ss_pred EEecCCCCCeEEEEEccCC-------ceeEEec-cCCCCEEEEEECCCCc-EEEEEcCCCeEEEEEcC
Q psy519 150 SGGTGSYDKAVRLWSITDG-------ASVRVFS-DHVSPVLSIAFSPCGK-YLASGGEDGLVLTHELT 208 (351)
Q Consensus 150 ~~~~~~~d~~i~i~d~~~~-------~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~ 208 (351)
..+. +|.+..++...- +-+..+. .....|..+...+++. .+++.+..|..+..++.
T Consensus 160 l~T~---~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 160 LVTH---NGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EEET---TSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEeC---CCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 6667 898888876431 1111111 1234465654444444 67777888888777764
No 375
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.68 E-value=1.2e+02 Score=30.27 Aligned_cols=36 Identities=17% Similarity=0.176 Sum_probs=30.6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q psy519 223 PVTSLVWSVTGETLVTGSLTGTVQFYGWPSASKIGI 258 (351)
Q Consensus 223 ~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 258 (351)
.+.+++..++..++++-+.|+++++|++.+++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 345566677889999999999999999999988876
No 376
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=59.23 E-value=1.2e+02 Score=28.42 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=43.9
Q ss_pred EEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcC---C-------CCEEEEEe--CCCeEEEE
Q psy519 181 VLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSV---T-------GETLVTGS--LTGTVQFY 248 (351)
Q Consensus 181 i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~-------~~~l~~~~--~dg~i~i~ 248 (351)
|.++.+ +..++++-+.|..+++|++++++++.............-...| . +.++++=. .+|..++|
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~ 301 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMG 301 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEE
Confidence 444444 4789999999999999999999988887662110000000111 1 24554422 46799999
Q ss_pred eCCCC
Q psy519 249 GWPSA 253 (351)
Q Consensus 249 ~~~~~ 253 (351)
.+...
T Consensus 302 ~l~~~ 306 (729)
T 3f7f_A 302 TLLVD 306 (729)
T ss_dssp EEEC-
T ss_pred EEEEc
Confidence 88543
No 377
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=52.08 E-value=1.2e+02 Score=28.31 Aligned_cols=37 Identities=5% Similarity=0.122 Sum_probs=27.9
Q ss_pred ceEEEEECCCCcEEEEeCCCcEEEEeCCCCeeeEEeeC
Q psy519 52 TVWSVEACSKGLALTGSRDTTARLWSLEQMYPLRIFVG 89 (351)
Q Consensus 52 ~i~~~~~~~~~~~~~~~~d~~i~vw~~~~~~~~~~~~~ 89 (351)
.|.++.+. +..+++-+.|.++|+|++.+++++....-
T Consensus 223 ~Is~~~~~-~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH-ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC-CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45555543 33449999999999999999998877654
No 378
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=48.44 E-value=2e+02 Score=27.94 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=33.8
Q ss_pred CEEEEEECCCCcEEEEEcCCCeEEEEEcCCCcEEEEeec
Q psy519 180 PVLSIAFSPCGKYLASGGEDGLVLTHELTTGRVISRFHL 218 (351)
Q Consensus 180 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 218 (351)
.+.+++..++..++++-+.|+.+++|++.+++++....+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 466777788889999999999999999999999887654
No 379
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=44.60 E-value=1.4e+02 Score=25.13 Aligned_cols=142 Identities=9% Similarity=0.045 Sum_probs=77.8
Q ss_pred ecCCccccEEEEecCCCceEEEecCCc--cCCC-----------ccceEEEEEC-CCCcEEEEeCCCcEEEEeC---C--
Q psy519 19 FKPETVEDVLANLESQKNLQSRYLPYY--TSGH-----------DMTVWSVEAC-SKGLALTGSRDTTARLWSL---E-- 79 (351)
Q Consensus 19 ~sp~~~~~~l~~~~~~~~i~i~~~~~~--~~~~-----------~~~i~~~~~~-~~~~~~~~~~d~~i~vw~~---~-- 79 (351)
+-|+ .+++++.+.+|.|+--.+... ...+ ...+..+... ....++..+..|.++-+.. .
T Consensus 3 lI~~--e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 3 LIAP--EDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCC--CCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred cccC--CCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCC
Confidence 4467 889999999999987554332 1111 2233333222 2233455666666555443 2
Q ss_pred ----CCeeeEEe-e-CCCCCeEEEEEeC---CCCEEEEEeCCCcEEEEeCCCCc-------eeEEeccCCCCeEEEEEcc
Q psy519 80 ----QMYPLRIF-V-GHKQDVTCARFHP---KITYIGTGSYDKAVRLWSITDGA-------SVRVFSDHVSPVLSIAFSP 143 (351)
Q Consensus 80 ----~~~~~~~~-~-~~~~~i~~i~~~~---~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~ 143 (351)
.|.++..+ . .....|.++..-. +..+|+.++..|.++...+.... ....++. .+.+..+....
T Consensus 81 ~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 81 GSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp CTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred CcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Confidence 12222111 1 2345566554432 35688899999999988864322 1222332 34555555544
Q ss_pred CCCEEEEEecCCCCCeEEEEEcc
Q psy519 144 CGKYLASGGTGSYDKAVRLWSIT 166 (351)
Q Consensus 144 ~~~~l~~~~~~~~d~~i~i~d~~ 166 (351)
....++..+. +|.+..++..
T Consensus 160 ~~~~i~l~T~---~G~~irf~~~ 179 (370)
T 3l6v_A 160 GDRDVLLFAS---NGKTVRFGES 179 (370)
T ss_dssp SCCEEEEEET---TSEEEEEEGG
T ss_pred CCceEEEEeC---CCeEEEEEcc
Confidence 5556666666 8888888754
No 380
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=35.80 E-value=1e+02 Score=27.67 Aligned_cols=67 Identities=12% Similarity=0.043 Sum_probs=39.8
Q ss_pred EEEEEECC--CCcEEEEEcCCCeEEEEEcCCC----cEEEEeeccC-CCCEE-EEEEcCCCCEEEEEeCCCeEEE
Q psy519 181 VLSIAFSP--CGKYLASGGEDGLVLTHELTTG----RVISRFHLQE-HEPVT-SLVWSVTGETLVTGSLTGTVQF 247 (351)
Q Consensus 181 i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~-~~~v~-~~~~~~~~~~l~~~~~dg~i~i 247 (351)
.++++... +-..+..|+.+|.|.-..+... ..+..+.+.. ..+|. .+.+++++..|++++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 44444443 2345777888887765444322 1233333333 45774 8889998888988877654444
No 381
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=33.90 E-value=1.3e+02 Score=26.59 Aligned_cols=56 Identities=20% Similarity=0.310 Sum_probs=35.0
Q ss_pred EEEEEcCCCeEEEEEcC-CCc-------EEEEeec-cCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy519 192 YLASGGEDGLVLTHELT-TGR-------VISRFHL-QEHEPVTSLVWSVTGETLVTGSLTGTVQF 247 (351)
Q Consensus 192 ~l~~~~~dg~i~i~d~~-~~~-------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 247 (351)
.+..|+.+|.|.-.-+. .+. .+..+.. ....+|..+.++++...|++++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 56678888876533332 211 2223333 23468899999999999999888776554
No 382
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=32.21 E-value=2.3e+02 Score=23.83 Aligned_cols=219 Identities=11% Similarity=-0.009 Sum_probs=105.9
Q ss_pred ccEEEEecCCCceEEEecCCc-cCC--Cc--------------cceEEEEECCCCcE-EEEeCCCcEEEEeCCCCe----
Q psy519 25 EDVLANLESQKNLQSRYLPYY-TSG--HD--------------MTVWSVEACSKGLA-LTGSRDTTARLWSLEQMY---- 82 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-~~~--~~--------------~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~---- 82 (351)
.+.++.-..||.|+.|=.+.. ..+ +. ..+..++. .... +.-..||.|+.|-....-
T Consensus 10 ~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~--G~~~~~~l~~~G~v~~wG~n~~GqLG~ 87 (389)
T 3kci_A 10 GRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG--GEQTLFAVTADGKLYATGYGAGGRLGI 87 (389)
T ss_dssp -----------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEE--ETTEEEEEETTSCEEEEECCGGGTTSS
T ss_pred cccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEe--CCCeEEEEcCCCcEEEEECCCCCCCCC
Confidence 345555567788888865543 111 11 12333332 1222 555778999999654210
Q ss_pred -------eeEEee-CCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc-----------eeEEecc-CCCCeEEEEEc
Q psy519 83 -------PLRIFV-GHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA-----------SVRVFSD-HVSPVLSIAFS 142 (351)
Q Consensus 83 -------~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~-~~~~i~~~~~~ 142 (351)
....+. .....+..++.+......+.-..+|.|+.|-..... ....+.. ....|..++..
T Consensus 88 g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G 167 (389)
T 3kci_A 88 GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG 167 (389)
T ss_dssp SSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC
Confidence 111111 122345556666656666666789999999643211 1111221 12356666654
Q ss_pred cCCCEEEEEecCCCCCeEEEEEccCC-c----------eeEEecc-CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCC
Q psy519 143 PCGKYLASGGTGSYDKAVRLWSITDG-A----------SVRVFSD-HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTG 210 (351)
Q Consensus 143 ~~~~~l~~~~~~~~d~~i~i~d~~~~-~----------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 210 (351)
....++... +|.|+.|=.... + ....+.. ....+..++......+.++-..+|.|+.|-....
T Consensus 168 --~~hs~alt~---~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~ 242 (389)
T 3kci_A 168 --GAHSACVTA---AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 242 (389)
T ss_dssp --SSEEEEEET---TSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGG
T ss_pred --cCeEEEEeC---CCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCC
Confidence 334444445 899999964321 0 1111211 2335666665443355666678899999964321
Q ss_pred -----------cEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy519 211 -----------RVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPS 252 (351)
Q Consensus 211 -----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~ 252 (351)
.....+.......|..++.. ....++-..||.|+.|-...
T Consensus 243 GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 243 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp GTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCG
T ss_pred CCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCC
Confidence 11122221122346666553 34445556889999997643
No 383
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=30.83 E-value=2.4e+02 Score=23.68 Aligned_cols=220 Identities=13% Similarity=0.033 Sum_probs=113.0
Q ss_pred ccEEEEecCCCceEEEecCCc-cC----------------CCccceEEEEECCCCcE-EEEeCCCcEEEEeCCCCe----
Q psy519 25 EDVLANLESQKNLQSRYLPYY-TS----------------GHDMTVWSVEACSKGLA-LTGSRDTTARLWSLEQMY---- 82 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-~~----------------~~~~~i~~~~~~~~~~~-~~~~~d~~i~vw~~~~~~---- 82 (351)
....++-..+|.|+.|-.... .. .....+..++.+..... +.-..||.|+.|-....-
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 334455567888888865443 00 01122333455444445 667889999999653211
Q ss_pred -------eeEEeeC-CCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-c----------eeEEec-cCCCCeEEEEEc
Q psy519 83 -------PLRIFVG-HKQDVTCARFHPKITYIGTGSYDKAVRLWSITDG-A----------SVRVFS-DHVSPVLSIAFS 142 (351)
Q Consensus 83 -------~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~~-~~~~~i~~~~~~ 142 (351)
....+.. ....|..++.. ....+.-..+|.|+.|=.... + ....+. .....|..++..
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 1111111 12356666554 334455567899999965321 1 111111 123456677665
Q ss_pred cCCCEEEEEecCCCCCeEEEEEccCC-c----------eeEEecc-CCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCC
Q psy519 143 PCGKYLASGGTGSYDKAVRLWSITDG-A----------SVRVFSD-HVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTG 210 (351)
Q Consensus 143 ~~~~~l~~~~~~~~d~~i~i~d~~~~-~----------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 210 (351)
....+.++... ++.|+.|-.... + ....+.. ....|..++.- ..+.++-..+|.|+.|-....
T Consensus 220 ~g~~~t~~l~~---~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~ 294 (389)
T 3kci_A 220 SGDAQTLCLTD---DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDY 294 (389)
T ss_dssp CSSCEEEEEET---TTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGG
T ss_pred CCCcEEEEEcc---CCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCC
Confidence 43345555556 899999964321 0 1112221 12245555543 334444567899999965321
Q ss_pred -----------cEEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy519 211 -----------RVISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 211 -----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
.....+.......|..++-. ....++...||.|+.|-....
T Consensus 295 GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 295 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp GTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTT
T ss_pred CCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCCC
Confidence 11122221122346666543 344555578899999977643
No 384
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=29.54 E-value=1.2e+02 Score=26.98 Aligned_cols=57 Identities=19% Similarity=0.145 Sum_probs=36.8
Q ss_pred cEEEEEcCCCeEEEEEcC-C--CcEEEEeeccCCCCE-EEEEEcCCCCEEEEEeCCCeEEE
Q psy519 191 KYLASGGEDGLVLTHELT-T--GRVISRFHLQEHEPV-TSLVWSVTGETLVTGSLTGTVQF 247 (351)
Q Consensus 191 ~~l~~~~~dg~i~i~d~~-~--~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~i 247 (351)
..+..|+.+|.|.-.-+. + ...+..+......+| ..+.++++...|++++.++.+++
T Consensus 401 tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 401 TIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 356678888887644332 2 123334444445677 48899998889999888776665
No 385
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=27.10 E-value=3.5e+02 Score=24.44 Aligned_cols=178 Identities=11% Similarity=0.082 Sum_probs=89.4
Q ss_pred CcEEEEeCCCCeeeEEeeC--------CCCCeEEEEEeCCCC-EEEEEeCCCc---------------------------
Q psy519 71 TTARLWSLEQMYPLRIFVG--------HKQDVTCARFHPKIT-YIGTGSYDKA--------------------------- 114 (351)
Q Consensus 71 ~~i~vw~~~~~~~~~~~~~--------~~~~i~~i~~~~~~~-~l~~~~~dg~--------------------------- 114 (351)
..|.+|++. ++.+..+.. |-..+....|.-||+ -++....+|+
T Consensus 151 ~~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpE 229 (591)
T 2zux_A 151 VLIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPE 229 (591)
T ss_dssp CEEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCC
T ss_pred cEEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCc
Confidence 357788876 555554432 333455666666664 4555544554
Q ss_pred -EEEEeCCCCceeEEeccC--CCC---------------eEEEEEcc-CCCEEEEEecCCC-CCeEEEEEccCCceeEEe
Q psy519 115 -VRLWSITDGASVRVFSDH--VSP---------------VLSIAFSP-CGKYLASGGTGSY-DKAVRLWSITDGASVRVF 174 (351)
Q Consensus 115 -i~i~d~~~~~~~~~~~~~--~~~---------------i~~~~~~~-~~~~l~~~~~~~~-d~~i~i~d~~~~~~~~~~ 174 (351)
+.++|-.+|+.+....-. ... ..++++-. +...++.+- +-+ ...+..||.+.++.....
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~r-GyYtr~~v~A~d~~~~~L~~~W 308 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTR-GYYAKTMLVAYNFRDGKLSKLW 308 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEE-CCSSSCEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEec-cccceeEEEEEECCCCceEEEE
Confidence 788888888877664321 111 23333321 112333321 001 235888998877654433
Q ss_pred --ccC-----------CCCEEEEEECCCCc-EEEEEcCCCeEEEEEcCCCcEEEEeeccCCCCEEEEEEcCC--CCEEEE
Q psy519 175 --SDH-----------VSPVLSIAFSPCGK-YLASGGEDGLVLTHELTTGRVISRFHLQEHEPVTSLVWSVT--GETLVT 238 (351)
Q Consensus 175 --~~~-----------~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~ 238 (351)
... ...+.-..+.-||+ -|+.|+. ++| .+|+.+......|...+.-..|.|+ |..++.
T Consensus 309 ~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~-----~iD-~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~ 382 (591)
T 2zux_A 309 TLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSM-----AVD-HDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQ 382 (591)
T ss_dssp EEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTE-----EEC-TTSCEEEECSCCCCSCEEEECCCTTSSSCEEEE
T ss_pred EecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeee-----EEC-CCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEE
Confidence 111 02333344455553 3333331 223 2445555444555566666667776 334555
Q ss_pred EeCCC----eEEEEeCCCCcee
Q psy519 239 GSLTG----TVQFYGWPSASKI 256 (351)
Q Consensus 239 ~~~dg----~i~i~~~~~~~~~ 256 (351)
+.+++ -..+.|..+++.+
T Consensus 383 ~~E~~~~~~G~~~~dA~tG~vl 404 (591)
T 2zux_A 383 VHEDKNAKYGLSFRDAATGKIL 404 (591)
T ss_dssp ECCCTTSSCSEEEEETTTCCEE
T ss_pred EecCCCCCCccEEEECCCCcEE
Confidence 44431 3445677776665
No 386
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=26.52 E-value=3.3e+02 Score=23.99 Aligned_cols=67 Identities=12% Similarity=0.029 Sum_probs=41.8
Q ss_pred CeEEEEEeC----CC--CEEEEEeCCCcEEEEeCC-CCc-------eeEEec--cCCCCeEEEEEccCCCEEEEEecCCC
Q psy519 93 DVTCARFHP----KI--TYIGTGSYDKAVRLWSIT-DGA-------SVRVFS--DHVSPVLSIAFSPCGKYLASGGTGSY 156 (351)
Q Consensus 93 ~i~~i~~~~----~~--~~l~~~~~dg~i~i~d~~-~~~-------~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~ 156 (351)
..+.|+... ++ ..++.|+.+|.|.-.-+. .+. .+..+. ....+|..|.++++..+|++++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~--- 481 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGST--- 481 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBS---
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEEC---
Confidence 456666643 23 357788889987655443 211 222332 23578999999999999999876
Q ss_pred CCeEEE
Q psy519 157 DKAVRL 162 (351)
Q Consensus 157 d~~i~i 162 (351)
++.+++
T Consensus 482 ~~V~~v 487 (495)
T 1q47_A 482 AGVAQL 487 (495)
T ss_dssp SCEEEE
T ss_pred CeEEEE
Confidence 554443
No 387
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=25.78 E-value=2.7e+02 Score=25.73 Aligned_cols=57 Identities=19% Similarity=0.344 Sum_probs=36.5
Q ss_pred cEEEEEcCCCeEE-EEEcCCCc-------EEEEee-ccCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy519 191 KYLASGGEDGLVL-THELTTGR-------VISRFH-LQEHEPVTSLVWSVTGETLVTGSLTGTVQF 247 (351)
Q Consensus 191 ~~l~~~~~dg~i~-i~d~~~~~-------~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 247 (351)
..+..|+.+|.|. +.-..... .+..+. .....+|..|.++++...|++++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 3577888898874 33222211 122222 234568999999999999999998876655
No 388
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=25.37 E-value=2.7e+02 Score=25.24 Aligned_cols=57 Identities=11% Similarity=0.043 Sum_probs=36.8
Q ss_pred cEEEEEcCCCeEEEEEcC-CC----c-EEEEeec-cCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy519 191 KYLASGGEDGLVLTHELT-TG----R-VISRFHL-QEHEPVTSLVWSVTGETLVTGSLTGTVQF 247 (351)
Q Consensus 191 ~~l~~~~~dg~i~i~d~~-~~----~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 247 (351)
..+..|+.+|.|.-.-.. ++ . .+..+.. ....+|..+.++++...|++++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 367788888887543332 22 1 1222221 23467899999999999999988766665
No 389
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=24.78 E-value=2.5e+02 Score=22.02 Aligned_cols=143 Identities=10% Similarity=-0.040 Sum_probs=76.5
Q ss_pred EEEEEeCCCcEEEEeCCCCce-eEEeccCCCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccC-------Ccee---EE
Q psy519 105 YIGTGSYDKAVRLWSITDGAS-VRVFSDHVSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITD-------GASV---RV 173 (351)
Q Consensus 105 ~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~-------~~~~---~~ 173 (351)
..++.+.+|.|+--....... ...++. .+.+..+........++..+. .|.++-+.... |..+ -.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~---~Gr~~~~~~~elp~~r~~G~~i~~~i~ 79 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDS---TGRSYAIDPITLPSARGQGEPLTGKLT 79 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEET---TSEEEEECGGGSCCSSSCCEEGGGTCC
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeC---CCeEEEEEHHHCCCcCCCCeEeeeeec
Confidence 455667777777665443211 112332 344444433333444444455 78766654421 1111 11
Q ss_pred eccCCCCEEEEEECCCCcEEEEEcCCCeEEEEEcCCC-----cEEEEeeccCCCCEEEEEEc-CCCCEEEEEeCCCeEEE
Q psy519 174 FSDHVSPVLSIAFSPCGKYLASGGEDGLVLTHELTTG-----RVISRFHLQEHEPVTSLVWS-VTGETLVTGSLTGTVQF 247 (351)
Q Consensus 174 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i 247 (351)
+. ....|..+....++.+++..+..|.++...+..- .-...+.+.....+..+... .++..++..+.+|.+..
T Consensus 80 L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 80 LP-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp CC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred CC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEE
Confidence 22 2345666644345677888899999998877421 11122222333455555555 34567888888999888
Q ss_pred EeCCC
Q psy519 248 YGWPS 252 (351)
Q Consensus 248 ~~~~~ 252 (351)
+....
T Consensus 159 f~~~e 163 (256)
T 1zvt_A 159 FPVSD 163 (256)
T ss_dssp EEGGG
T ss_pred EEHHH
Confidence 87754
No 390
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.30 E-value=3.4e+02 Score=22.95 Aligned_cols=143 Identities=8% Similarity=0.055 Sum_probs=80.6
Q ss_pred ccceEEEEEC---CC----CcE--EEEeCCCcEEEEeCCCCeeeEEee----CC--------------CCCeEEEEEeCC
Q psy519 50 DMTVWSVEAC---SK----GLA--LTGSRDTTARLWSLEQMYPLRIFV----GH--------------KQDVTCARFHPK 102 (351)
Q Consensus 50 ~~~i~~~~~~---~~----~~~--~~~~~d~~i~vw~~~~~~~~~~~~----~~--------------~~~i~~i~~~~~ 102 (351)
......+.+. ++ +.+ ++=.....|.|+|+.+++.-+.+. .. ...+..|+++|+
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 4567777776 22 233 555567889999999887655442 00 136778888887
Q ss_pred ----CCEEEEEeCCCcEEEEeCC-----CC---ceeEEeccC--CCCeEEEEEc-cCCCEEEEEecCCCCCeEEEEEccC
Q psy519 103 ----ITYIGTGSYDKAVRLWSIT-----DG---ASVRVFSDH--VSPVLSIAFS-PCGKYLASGGTGSYDKAVRLWSITD 167 (351)
Q Consensus 103 ----~~~l~~~~~dg~i~i~d~~-----~~---~~~~~~~~~--~~~i~~~~~~-~~~~~l~~~~~~~~d~~i~i~d~~~ 167 (351)
++.|+.....+ -++|.+. .. ..++.+... ...-..++++ .+|.++++--. ...|..|+..+
T Consensus 231 ~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~---~~aI~~w~~~~ 306 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN---TKQVSCWNTQK 306 (381)
T ss_dssp CTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESS---SSEEEEEETTS
T ss_pred cCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEecc---CCeEEEEeCCC
Confidence 66776665544 2233332 11 122222111 1344556776 56766666655 88999999865
Q ss_pred -C---ceeEEec--cCCCCEEEEEECCCCcEEEEE
Q psy519 168 -G---ASVRVFS--DHVSPVLSIAFSPCGKYLASG 196 (351)
Q Consensus 168 -~---~~~~~~~--~~~~~i~~~~~~~~~~~l~~~ 196 (351)
. +....+. ..-..+..+.+.++|.+.+..
T Consensus 307 ~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 307 MPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred CccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 1 1122221 122345667776666544444
No 391
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=23.20 E-value=3.4e+02 Score=22.94 Aligned_cols=217 Identities=8% Similarity=-0.083 Sum_probs=107.6
Q ss_pred ccEEEEecCCCceEEEecCCc-cCC----------------CccceEEEEECCCCcEEEEeCCCcEEEEeC--CC-Cee-
Q psy519 25 EDVLANLESQKNLQSRYLPYY-TSG----------------HDMTVWSVEACSKGLALTGSRDTTARLWSL--EQ-MYP- 83 (351)
Q Consensus 25 ~~~l~~~~~~~~i~i~~~~~~-~~~----------------~~~~i~~~~~~~~~~~~~~~~d~~i~vw~~--~~-~~~- 83 (351)
+...++-..+|.|+.|-.... ..+ ....|..++.... ..+.-..||.|+.|-. .. ++.
T Consensus 84 ~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~~-hs~al~~~G~v~~wG~~~n~~GqlG 162 (423)
T 3mvd_K 84 GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDS-HSACLLEDGRVFAWGSFRDSHGNMG 162 (423)
T ss_dssp SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECSS-EEEEEETTSCEEEEECEECSSSEEE
T ss_pred CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCcC-eEEEEeCCCeEEEEeCCCCCCCCcC
Confidence 445555567899999976543 000 1124555544322 2255578899999975 32 221
Q ss_pred --------eEEeeCCCCCeEEEEEeCCCCEEEEEeCCCcEEEEeCCCCc-----------------------eeEEeccC
Q psy519 84 --------LRIFVGHKQDVTCARFHPKITYIGTGSYDKAVRLWSITDGA-----------------------SVRVFSDH 132 (351)
Q Consensus 84 --------~~~~~~~~~~i~~i~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------------------~~~~~~~~ 132 (351)
..........|..++... ...+.-..+|.|+.|=..... +.......
T Consensus 163 ~~~~~~~~~p~~~~~~~~i~~va~G~--~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~ 240 (423)
T 3mvd_K 163 LTIDGNKRTPIDLMEGTVCCSIASGA--DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITR 240 (423)
T ss_dssp SBTTBCEEEEEESSTTCCEEEEEECS--SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTT
T ss_pred cCCCCCCceeeEecCCCcEEEEecCC--CeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecC
Confidence 111111234566666543 344455678999999643211 11111112
Q ss_pred CCCeEEEEEccCCCEEEEEecCCCCCeEEEEEccCCc-----------eeEEeccCCCCEEEEEECCCCcEEEEEcCCCe
Q psy519 133 VSPVLSIAFSPCGKYLASGGTGSYDKAVRLWSITDGA-----------SVRVFSDHVSPVLSIAFSPCGKYLASGGEDGL 201 (351)
Q Consensus 133 ~~~i~~~~~~~~~~~l~~~~~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 201 (351)
...|..++.... ..++.-.. ++.|+.|-..... ...........|..++-- ..+.++-..+|.
T Consensus 241 ~~~v~~i~~g~~-~~~~~~~~---~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--~~ht~alt~~G~ 314 (423)
T 3mvd_K 241 AKPFEAIWATNY-CTFMRESQ---TQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--QHHTVILTTDLK 314 (423)
T ss_dssp CCCEEEEEEETT-EEEEEETT---TCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC--SSEEEEEETTCC
T ss_pred CccEEEEEECCc-EEEEEECC---CCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc--cCeEEEEeCCCc
Confidence 234555554322 12222234 8888888643210 011111112356655543 344455567899
Q ss_pred EEEEEcCCC---------c---EEEEeeccCCCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy519 202 VLTHELTTG---------R---VISRFHLQEHEPVTSLVWSVTGETLVTGSLTGTVQFYGWPSA 253 (351)
Q Consensus 202 i~i~d~~~~---------~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~~~~~~ 253 (351)
|+.|-.... . ....+. .....|..++-.. ...++...||.|+.|-....
T Consensus 315 v~~wG~n~~GqLG~g~~~~~~~~p~~v~-~l~~~v~~ia~G~--~hs~alt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 315 CSVVGRPEYGRLGLGDVKDVVEKPTIVK-KLTEKIVSVGCGE--VCSYAVTIDGKLYSWGSGVN 375 (423)
T ss_dssp EEEEECCGGGTTCSSSCCSCEEEEEECT-TCCSCEEEEEEET--TEEEEEETTSCEEEEECCTT
T ss_pred EEEEECCCCCCCCCCCccccccCceEec-cCCCCEEEEEcCC--CeEEEEcCCCCEEEECCCCC
Confidence 999964321 1 111121 1112566666543 34444468899999976653
Done!