Query psy5190
Match_columns 292
No_of_seqs 110 out of 139
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 19:39:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i4d_A Arfaptin 2, partner of 100.0 9.7E-73 3.3E-77 511.9 18.3 200 91-292 1-224 (224)
2 1uru_A Amphiphysin; endocytosi 99.6 4.4E-14 1.5E-18 124.3 15.9 195 75-274 15-237 (244)
3 2fic_A Bridging integrator 1; 99.4 9.6E-12 3.3E-16 110.8 18.9 191 75-272 30-245 (251)
4 1zww_A SH3-containing GRB2-lik 99.0 7.1E-09 2.4E-13 93.7 16.5 190 75-281 8-248 (256)
5 2z0v_A SH3-containing GRB2-lik 99.0 1.3E-08 4.4E-13 91.3 16.2 154 113-283 77-234 (240)
6 2q12_A DIP13 alpha, DCC-intera 98.8 5.8E-07 2E-11 80.7 19.2 158 105-267 53-219 (265)
7 4avm_A Bridging integrator 2; 98.6 8.8E-06 3E-10 73.1 21.9 183 75-268 11-222 (237)
8 2q13_A DCC-interacting protein 98.5 4.1E-06 1.4E-10 78.8 18.3 158 105-266 53-218 (385)
9 4a3a_A Amphiphysin; structural 98.3 2.1E-05 7.2E-10 71.1 15.9 187 75-268 16-227 (243)
10 4h8s_A DCC-interacting protein 98.2 0.00012 4E-09 69.4 18.5 182 63-265 50-240 (407)
11 2v0o_A FCHO2, FCH domain only 97.5 0.0057 1.9E-07 54.0 16.6 171 105-276 43-250 (276)
12 4akv_A Sorting nexin-33; trans 97.3 0.0098 3.3E-07 56.9 16.6 143 110-274 226-384 (386)
13 3dyt_A Sorting nexin-9; 3-heli 97.0 0.025 8.5E-07 53.4 16.7 145 108-274 204-364 (366)
14 3i2w_A Syndapin, LD46328P; EFC 96.9 0.075 2.6E-06 47.5 17.8 113 166-278 126-267 (290)
15 2efk_A CDC42-interacting prote 96.8 0.059 2E-06 48.0 16.2 132 147-278 95-262 (301)
16 2efl_A Formin-binding protein 96.7 0.06 2.1E-06 47.8 15.7 174 105-278 39-269 (305)
17 3abh_A Pacsin2, protein kinase 96.6 0.37 1.3E-05 43.5 19.9 112 167-278 149-289 (312)
18 3haj_A Human pacsin2 F-BAR; pa 96.6 0.084 2.9E-06 51.4 16.7 105 172-276 147-280 (486)
19 3aco_A Pacsin2, protein kinase 96.5 0.19 6.4E-06 46.4 18.0 115 164-278 146-289 (350)
20 2x3v_A Syndapin I, protein kin 96.2 0.52 1.8E-05 42.9 18.7 113 166-278 139-280 (337)
21 3caz_A BAR protein; thermo-aci 96.0 0.14 4.8E-06 46.3 13.6 105 154-270 102-209 (294)
22 2ykt_A Brain-specific angiogen 95.7 0.93 3.2E-05 41.2 18.0 165 105-272 47-228 (253)
23 3m3w_A Pacsin3, protein kinase 95.5 1.5 5.2E-05 40.2 20.1 107 170-276 143-278 (320)
24 4dyl_A Tyrosine-protein kinase 93.9 1.1 3.6E-05 42.8 14.0 174 105-278 37-261 (406)
25 3g9g_A Suppressor of yeast pro 91.7 2.1 7E-05 39.8 12.1 56 214-269 192-247 (287)
26 2d1l_A Metastasis suppressor p 86.0 20 0.00069 32.6 17.0 88 105-195 49-144 (253)
27 1i4d_A Arfaptin 2, partner of 68.8 45 0.0015 29.9 10.8 159 109-273 29-199 (224)
28 3ok8_A Brain-specific angiogen 54.1 1.2E+02 0.0042 27.1 18.1 158 105-271 45-216 (222)
29 2q13_A DCC-interacting protein 46.6 98 0.0033 28.5 9.4 28 105-132 39-66 (385)
30 3ghg_A Fibrinogen alpha chain; 46.3 78 0.0027 32.1 9.0 32 204-235 129-160 (562)
31 2q12_A DIP13 alpha, DCC-intera 44.7 1.6E+02 0.0053 25.6 12.4 59 126-184 195-254 (265)
32 4h8s_A DCC-interacting protein 43.5 1.6E+02 0.0055 27.2 10.4 19 207-225 155-173 (407)
33 3plt_A Sphingolipid long chain 41.2 2E+02 0.0069 25.9 12.8 44 94-137 16-59 (234)
34 2a01_A Apolipoprotein A-I; fou 36.4 1.3E+02 0.0043 26.5 8.1 86 139-229 84-170 (243)
35 3r2p_A Apolipoprotein A-I; amp 33.4 1.5E+02 0.0052 24.8 7.8 46 127-172 39-85 (185)
36 3ol1_A Vimentin; structural ge 28.8 2.2E+02 0.0074 22.6 8.2 41 207-249 56-100 (119)
37 1nfn_A Apolipoprotein E3; lipi 27.8 2.8E+02 0.0097 23.6 11.2 36 139-174 69-104 (191)
38 4gwp_A Mediator of RNA polymer 24.1 2.9E+02 0.01 22.5 8.0 66 97-162 14-80 (115)
39 1nfn_A Apolipoprotein E3; lipi 22.3 3.6E+02 0.012 22.9 11.4 56 212-271 105-160 (191)
40 1m1j_A Fibrinogen alpha subuni 21.4 3.8E+02 0.013 26.7 9.0 33 204-236 130-162 (491)
41 2e8o_A SAM domain and HD domai 20.6 44 0.0015 25.7 1.9 32 43-76 3-34 (103)
No 1
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=100.00 E-value=9.7e-73 Score=511.89 Aligned_cols=200 Identities=58% Similarity=0.851 Sum_probs=162.4
Q ss_pred CCccCchhhhHHH--H----------------------HHHHHHHHHHHHHHHHhhcChhhHHHHhhchhhhhhhhHhhH
Q psy5190 91 STRTVDSDLKSRV--L----------------------VIFFLQQTLGEAFADLAQKSPELQEEFLCNSETQRNLTGTGE 146 (292)
Q Consensus 91 ~~~TvD~ELeakI--l----------------------~l~qtq~~lgd~F~~Ls~kEpeL~~eF~~naetqr~m~k~G~ 146 (292)
|+||||+|||+|| | .++++|++||++|++||+++|+++++|++||++||+|++||+
T Consensus 1 ~~rtvD~EL~~klE~l~~~q~~Y~~L~~~~~~l~~~~~~l~qtq~~lG~~f~~l~~~~p~l~~~f~~~~~~~r~~~k~g~ 80 (224)
T 1i4d_A 1 GSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCKNGE 80 (224)
T ss_dssp -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHhHH
Confidence 5899999999999 1 799999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCcccccchHHHHHHHHHHHHHHHHhHH
Q psy5190 147 ILLNALNLFVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNCSHLDEAQRNFQTHRENFEKLR 226 (292)
Q Consensus 147 ~Ll~aL~~f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR 226 (292)
.|++||+||++|||||++||||||++||++||+|||||||||+|||+|++++++ ..++|||+++|+||+.+|+||+|||
T Consensus 81 ~Ll~~L~~f~s~l~T~~~kaI~DT~lTIk~ye~aR~EY~ay~~~~ee~~~~~~~-~~~l~rve~~q~~~~~ak~kf~kLR 159 (224)
T 1i4d_A 81 TLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRD-AGTRGRLESAQATFQAHRDKYEKLR 159 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhccHHHHHHHHHHHHhHhHHHHHhhHHHhhccccc-ccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999865 4589999999999999999999999
Q ss_pred hHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccCCCCCCCcccccC
Q psy5190 227 NDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNEPGLQATLKQFNIKTNKIPSQNSMLYSAEH 292 (292)
Q Consensus 227 ~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~~~Le~tl~~F~i~~~~~~~~~~~~~~~~~ 292 (292)
+||++||||||+||||||+|||++|||||++||+||+++|++++++|||+++ .|+++.|+|+++|
T Consensus 160 ~DV~~KleLLd~~r~kv~~~qL~~~~~al~~y~~~~~~~l~~~~~~f~i~~~-~~~~~~~s~le~~ 224 (224)
T 1i4d_A 160 GDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQTLQQFNIKLR-PPGAEKPSWLEEQ 224 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------------------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCcccC-CCCCCCCcccccC
Confidence 9999999999999999999999999999999999999999999999999996 8999999999986
No 2
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=99.58 E-value=4.4e-14 Score=124.29 Aligned_cols=195 Identities=14% Similarity=0.201 Sum_probs=143.3
Q ss_pred chhHHHHHHHHHHhCCCCccCchhhhHHH--H----------------------HHHHHHHHHHHHHHHHhhcChhhHHH
Q psy5190 75 STYKCTRQIMYEKLGKSTRTVDSDLKSRV--L----------------------VIFFLQQTLGEAFADLAQKSPELQEE 130 (292)
Q Consensus 75 ~tyk~TKQ~l~EklGk~~~TvD~ELeakI--l----------------------~l~qtq~~lgd~F~~Ls~kEpeL~~e 130 (292)
+.+..++|.|.+++|+++.|+|.++|... | .+..++..||++|.++...++...++
T Consensus 15 k~~~R~~q~~~~k~G~~e~t~D~~fe~~~~~f~~~e~~~~~l~k~~~~y~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~ 94 (244)
T 1uru_A 15 KHAGRAKEKILQNLGKVDRTADEIFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQWSGYDA 94 (244)
T ss_dssp -----------CCSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSTTHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCchH
Confidence 67889999999999999999999998766 1 46667778888888887655544444
Q ss_pred HhhchhhhhhhhHhhHHHHH-hHHHHHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCcccccchHH
Q psy5190 131 FLCNSETQRNLTGTGEILLN-ALNLFVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNCSHLD 209 (292)
Q Consensus 131 F~~naetqr~m~k~G~~Ll~-aL~~f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r~e 209 (292)
+...++....+. ..+.. .-..|+.-|++|+ +.|++...+|++.++.|++||+|+..++.+...+... ..-.++.
T Consensus 95 ~~~~~~~~~~~~---~~~~~~~~~~vi~Pl~~~~-~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~k~~k~-kd~~kl~ 169 (244)
T 1uru_A 95 LQAQTGASESLW---ADFAHKLGDQVLIPLNTYT-GQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANANKR-KDDVKLT 169 (244)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHTTTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCBT-TBCCTTT
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccC-ccHHHHH
Confidence 444433221111 11111 1256778888888 5999999999999999999999999999987554111 2345777
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcC---HHHHHHHhhhcc
Q psy5190 210 EAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGN---EPGLQATLKQFN 274 (292)
Q Consensus 210 taqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn---~~~Le~tl~~F~ 274 (292)
.++..++.+++.|+.+...+..-|.-|.++|+..+...|..|..+-..||..+ .+.|...+..++
T Consensus 170 ~ae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~fv~~q~~~~~~~~~~~~~l~~~~~~l~ 237 (244)
T 1uru_A 170 KGREQLEEARRTYEILNTELHDELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKLA 237 (244)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999 666666666654
No 3
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=99.43 E-value=9.6e-12 Score=110.77 Aligned_cols=191 Identities=15% Similarity=0.158 Sum_probs=126.1
Q ss_pred chhHHHHHHHHHHhCCCCccCchhhhHHH--H----------------------HHHHHHHHHHHHHHHHhhcChhhHHH
Q psy5190 75 STYKCTRQIMYEKLGKSTRTVDSDLKSRV--L----------------------VIFFLQQTLGEAFADLAQKSPELQEE 130 (292)
Q Consensus 75 ~tyk~TKQ~l~EklGk~~~TvD~ELeakI--l----------------------~l~qtq~~lgd~F~~Ls~kEpeL~~e 130 (292)
+.+.-++|.+.+++|+++.|.|.++|... | .+..++..||++|.++......-.++
T Consensus 30 K~~~Ra~q~~~~k~G~~e~T~D~~Fe~~~~~f~~~e~~~~~l~k~~k~y~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~ 109 (251)
T 2fic_A 30 KKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDE 109 (251)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSTTHHH
T ss_pred HHHHHhhHHHHHHcCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCchh
Confidence 78889999999999999999999988765 1 46666777888888765433322222
Q ss_pred Hhhchhhhh-hhhHhhHHHHHhHHHHHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCcccccchHH
Q psy5190 131 FLCNSETQR-NLTGTGEILLNALNLFVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNCSHLD 209 (292)
Q Consensus 131 F~~naetqr-~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r~e 209 (292)
+...++... .+......+. ..|+.-|.+|+ ..|++...+|++.++.|++||+++..++.+...+.. .-.++.
T Consensus 110 ~~~~~~~~~~~~~d~~~~l~---~~vi~Pl~~~~-~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~k~~k---d~~kl~ 182 (251)
T 2fic_A 110 ANKIAENNDLLWMDYHQKLV---DQALLTMDTYL-GQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKK---DEAKIA 182 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHTHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH-HHhHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCcC---cHHHHH
Confidence 322222221 1222222222 45788889999 689999999999999999999999999998866542 235778
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCHHHHHHHhhh
Q psy5190 210 EAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNEPGLQATLKQ 272 (292)
Q Consensus 210 taqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~~~Le~tl~~ 272 (292)
.++..++.+++.|+.+-.++..-|.-|.++|+..+...|..|..+-..||..+.+.+.....+
T Consensus 183 kae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~f~~~Q~~f~~~~~~~~~~L~~~ 245 (251)
T 2fic_A 183 KAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDV 245 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999998876444
No 4
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=99.04 E-value=7.1e-09 Score=93.66 Aligned_cols=190 Identities=16% Similarity=0.211 Sum_probs=130.2
Q ss_pred chhHHHHHHHHHHhCCCCcc-Cchh---hhHHH--H-----H------------------------HHH-----------
Q psy5190 75 STYKCTRQIMYEKLGKSTRT-VDSD---LKSRV--L-----V------------------------IFF----------- 108 (292)
Q Consensus 75 ~tyk~TKQ~l~EklGk~~~T-vD~E---LeakI--l-----~------------------------l~q----------- 108 (292)
+++--++|.+.||+|..++| .|.| ||.++ + . +..
T Consensus 8 K~~~ra~q~~~ek~G~~E~Tel~~d~~~lE~r~d~~k~~~~kl~k~~~~yl~~np~~r~~~~~~~~i~k~~g~~k~~~~p 87 (256)
T 1zww_A 8 KQFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYP 87 (256)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTTC---------------------C
T ss_pred HHHHHHHHHHHhHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHhhcccccCCCC
Confidence 45778899999999999998 5754 45555 1 0 111
Q ss_pred -HHHHHHHHHHHHhh---cChhhHHHHhhchhhhhhhhHhhHHHHHh-HHHHHHhHHHhhhhhhhhHHHHHHHHHHhhHh
Q psy5190 109 -LQQTLGEAFADLAQ---KSPELQEEFLCNSETQRNLTGTGEILLNA-LNLFVSSVNTLCNKTIEDTLVTVRQYENARVE 183 (292)
Q Consensus 109 -tq~~lgd~F~~Ls~---kEpeL~~eF~~naetqr~m~k~G~~Ll~a-L~~f~sdl~Tf~~KAI~DTllTIkkYE~AR~E 183 (292)
+-..||+++.+.|. .+..++..+...|++++.|......+... -..|+.-+++|++.-|++.....++.+..|++
T Consensus 88 ~~~~~L~~~m~~~~~~l~~~s~~g~aL~~~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~~~~k~i~k~rkkl~~~rLd 167 (256)
T 1zww_A 88 QAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLD 167 (256)
T ss_dssp CHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10256776666665 33347788888888888887766666644 45688899999999999999999999999999
Q ss_pred HHHHHhhHHHhhccccCcccccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCH
Q psy5190 184 YDAYRTDLELLLQVTSNVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNE 263 (292)
Q Consensus 184 YdAyrl~leem~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~ 263 (292)
||+.+..++.. +...++.++.+|+..+.++..-|.=|-++++.-+ .+|..|..|-..||..++
T Consensus 168 yD~~k~k~~k~----------------~eeEle~A~~~fe~~~e~~~~~m~~l~~~e~e~~-~~L~~~v~aQl~y~~~~~ 230 (256)
T 1zww_A 168 FGYKKKRQGKI----------------PDEELRQALEKFDESKEIAESSMFNLLEMDIEQV-SQLSALVQAQLEYHKQAV 230 (256)
T ss_dssp HHHHHHTTTTS----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccc----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99998775421 3566888999999999999999988888888777 899999999999999999
Q ss_pred HHHHHHhhhcccccccCC
Q psy5190 264 PGLQATLKQFNIKTNKIP 281 (292)
Q Consensus 264 ~~Le~tl~~F~i~~~~~~ 281 (292)
+.|++....++-.+...+
T Consensus 231 e~L~~l~~~l~~~~~~~~ 248 (256)
T 1zww_A 231 QILQQVTVRLEERIRQAS 248 (256)
T ss_dssp HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999888765555433
No 5
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=98.99 E-value=1.3e-08 Score=91.28 Aligned_cols=154 Identities=16% Similarity=0.249 Sum_probs=128.1
Q ss_pred HHHHHHHHhh---cChhhHHHHhhchhhhhhhhHhhHHHHHhH-HHHHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHH
Q psy5190 113 LGEAFADLAQ---KSPELQEEFLCNSETQRNLTGTGEILLNAL-NLFVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYR 188 (292)
Q Consensus 113 lgd~F~~Ls~---kEpeL~~eF~~naetqr~m~k~G~~Ll~aL-~~f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyr 188 (292)
||+++.+.|. .+..++..+..+|++++.|......+...+ .-|+.-|++|++.-|++.....|+.+..|+.||+.+
T Consensus 77 L~~~m~~~~~~l~~ds~~g~aL~~~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~~d~k~i~~~rKkle~~rLd~D~ak 156 (240)
T 2z0v_A 77 LGDCMLKYGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK 156 (240)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555544443 345599999999999999988887777554 568889999999999999999999999999999998
Q ss_pred hhHHHhhccccCcccccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCHHHHHH
Q psy5190 189 TDLELLLQVTSNVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNEPGLQA 268 (292)
Q Consensus 189 l~leem~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~~~Le~ 268 (292)
..++. .+...++.++.+|+..+.++..-|.=+-++++.-+. +|..|..|-+.||..+++.|++
T Consensus 157 ~k~~k----------------~~eeEl~~A~~~fe~~~e~~~~~m~~~~~~~~e~l~-~l~~~v~aQl~y~~~~~e~L~~ 219 (240)
T 2z0v_A 157 KRVGK----------------IPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVS-QLAVFIEAALDYHRQSTEILQE 219 (240)
T ss_dssp TTTTS----------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 87532 125668899999999999999999888888988887 9999999999999999999999
Q ss_pred HhhhcccccccCCCC
Q psy5190 269 TLKQFNIKTNKIPSQ 283 (292)
Q Consensus 269 tl~~F~i~~~~~~~~ 283 (292)
....++-.+...++.
T Consensus 220 l~~~l~~~~~~~~~~ 234 (240)
T 2z0v_A 220 LQSKLQMRISAASSV 234 (240)
T ss_dssp HHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHhcC
Confidence 988887666655543
No 6
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=98.78 E-value=5.8e-07 Score=80.74 Aligned_cols=158 Identities=12% Similarity=0.108 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHhh-------cChhhHHHHhhchhhhhhhhHhhHHHHHhHHHH-HHhHHHhhhhhhhhHHHHHHH
Q psy5190 105 VIFFLQQTLGEAFADLAQ-------KSPELQEEFLCNSETQRNLTGTGEILLNALNLF-VSSVNTLCNKTIEDTLVTVRQ 176 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~-------kEpeL~~eF~~naetqr~m~k~G~~Ll~aL~~f-~sdl~Tf~~KAI~DTllTIkk 176 (292)
.+.+++..|.+.+.+++. .++.+...|..|+++.+-+......|+..+... +.-|..|++..|...+..=|+
T Consensus 53 ~~~~a~~~f~~~L~~~~~~~~~~~~~d~~~~~~L~~f~~~l~ei~~~~~~l~~~~~~~~~~PL~~f~~~dlk~~ke~kk~ 132 (265)
T 2q12_A 53 ELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEV 132 (265)
T ss_dssp HHHHHHHHHHHHHHGGGGSCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788889999998765 455688899999999999998888888777644 555999999999999999999
Q ss_pred HHHhhHhHHHHHhhHHHhhccccCcccccc-hHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHH
Q psy5190 177 YENARVEYDAYRTDLELLLQVTSNVDSNCS-HLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAI 255 (292)
Q Consensus 177 YE~AR~EYdAyrl~leem~~e~~~~~~~l~-r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl 255 (292)
|+.++.+||+++.+.-.++... +-+ .+.++...+..+|..|.+-+.|-+.+|.-+..++--.+-..|..|.+|.
T Consensus 133 fdk~~~~yd~al~k~~~~~k~k-----~~e~~l~Ea~~~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~ 207 (265)
T 2q12_A 133 FQIASNDHDAAINRYSRLSKKR-----ENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQ 207 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCC-----cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999977776432 122 2467889999999999999999999999999988889999999999999
Q ss_pred HHHHhcCHHHHH
Q psy5190 256 SAYFSGNEPGLQ 267 (292)
Q Consensus 256 ~ay~sgn~~~Le 267 (292)
..||..+++.+.
T Consensus 208 ~~ff~~g~e~~~ 219 (265)
T 2q12_A 208 ISFFKMGSENLN 219 (265)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHHHH
Confidence 999999887763
No 7
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=98.62 E-value=8.8e-06 Score=73.08 Aligned_cols=183 Identities=15% Similarity=0.243 Sum_probs=134.1
Q ss_pred chhHHHHHHHHHHhCCCCccCchhhhHHH--H----------------------HHHHHHHHHHHHHHHHhhcChhhHHH
Q psy5190 75 STYKCTRQIMYEKLGKSTRTVDSDLKSRV--L----------------------VIFFLQQTLGEAFADLAQKSPELQEE 130 (292)
Q Consensus 75 ~tyk~TKQ~l~EklGk~~~TvD~ELeakI--l----------------------~l~qtq~~lgd~F~~Ls~kEpeL~~e 130 (292)
+...-+.|.|..++|.++.|+|.+.|.-. | .++..|..++++|.++-.-...-.++
T Consensus 11 K~~~R~~q~lkqk~G~~e~T~D~~Fe~~e~rF~~le~~~~kL~k~~k~y~~ai~~~~~~q~~~~~~l~~~y~~~~~~~~~ 90 (237)
T 4avm_A 11 KKFSRAQEKVLQKLGKAVETKDERFEQSASNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSSEWDGHEE 90 (237)
T ss_dssp HHHHHHHHHHHHHTTSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSTTHHH
T ss_pred HHHhhhhHHHHHHcCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcHHH
Confidence 35566789999999999999999888765 1 35555566666666665322211111
Q ss_pred HhhchhhhhhhhHhhHHHHHhHHH-----HHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCccccc
Q psy5190 131 FLCNSETQRNLTGTGEILLNALNL-----FVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNC 205 (292)
Q Consensus 131 F~~naetqr~m~k~G~~Ll~aL~~-----f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l 205 (292)
..+.+... ..|...+.- ++.-+.+|+. .+++..-.|++=++.+++||+|+..++.+.+.+.. .-
T Consensus 91 ------~~~~~~~~-~~l~~~~~~~l~~~vi~Pl~~~~~-~~~~i~k~I~KR~~kllDyd~~~~~~~kl~~k~~k---d~ 159 (237)
T 4avm_A 91 ------LKAIVWNN-DLLWEDYEEKLADQAVRTMEIYVA-QFSEIKERIAKRGRKLVDYDSARHHLEAVQNAKKK---DE 159 (237)
T ss_dssp ------HHHHHHHH-HHHHHHHHHHHCCCCCHHHHHHHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSC---CH
T ss_pred ------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---cH
Confidence 11121111 122222221 2455667775 79999999999999999999999999999866542 33
Q ss_pred chHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCHHHHHH
Q psy5190 206 SHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNEPGLQA 268 (292)
Q Consensus 206 ~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~~~Le~ 268 (292)
.++.+++..+..++..|+.|-..+..=|--|-+.|+..+..-|..|...-..||.........
T Consensus 160 ~kl~kae~el~~a~~~ye~lN~~L~~eLP~l~~~~~~~~~~~~~~~i~~q~~f~~~~~~~~~~ 222 (237)
T 4avm_A 160 AKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVFYREMSKLNHN 222 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 678889999999999999999999999988999999999999999999999998876665544
No 8
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=98.54 E-value=4.1e-06 Score=78.83 Aligned_cols=158 Identities=13% Similarity=0.109 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHhh-------cChhhHHHHhhchhhhhhhhHhhHHHHHhHHHH-HHhHHHhhhhhhhhHHHHHHH
Q psy5190 105 VIFFLQQTLGEAFADLAQ-------KSPELQEEFLCNSETQRNLTGTGEILLNALNLF-VSSVNTLCNKTIEDTLVTVRQ 176 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~-------kEpeL~~eF~~naetqr~m~k~G~~Ll~aL~~f-~sdl~Tf~~KAI~DTllTIkk 176 (292)
++.++++.|.+.|.+++. .++.+...|..|+++.+-+......|+..+... +.-|..|++..|...+..=|+
T Consensus 53 ~~~~a~~~f~~~L~~~~~~~~~~~~~d~~v~~~l~~f~~~~~ei~~~~~~l~~~~~~~~~~PL~~f~~~di~~~ke~kk~ 132 (385)
T 2q13_A 53 ELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEV 132 (385)
T ss_dssp HHHHHHHHHHHHHHTTTTSCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566778888999988765 344467789999999998888778877766664 666999999999999999999
Q ss_pred HHHhhHhHHHHHhhHHHhhccccCcccccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q psy5190 177 YENARVEYDAYRTDLELLLQVTSNVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAIS 256 (292)
Q Consensus 177 YE~AR~EYdAyrl~leem~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ 256 (292)
|+.++-+||+++...-.++.... +-...+++...+..+|..|...+.|.+.+|.-+..++-..+...|..|.+|..
T Consensus 133 fek~~~~yd~al~k~~~~~k~k~----~e~~~~ea~~~l~~~rk~f~~~~ldy~~~l~~l~~rk~~e~le~l~~~~~a~~ 208 (385)
T 2q13_A 133 FQIASNDHDAAINRYSRLSKKRE----NDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQI 208 (385)
T ss_dssp HHHHHHHHHHHHHHHHTCCSSSC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988766653321 11123567788999999999999999999999999888888889999999999
Q ss_pred HHHhcCHHHH
Q psy5190 257 AYFSGNEPGL 266 (292)
Q Consensus 257 ay~sgn~~~L 266 (292)
.||..+.+.+
T Consensus 209 ~ff~~g~~~~ 218 (385)
T 2q13_A 209 SFFKMGSENL 218 (385)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHH
Confidence 9988877643
No 9
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=98.30 E-value=2.1e-05 Score=71.14 Aligned_cols=187 Identities=17% Similarity=0.166 Sum_probs=131.7
Q ss_pred chhHHHHHHHHHHhCCCCccCchhhhHHH--H----------------------HHHHHHHHHHHHHHHHhhcChhhHHH
Q psy5190 75 STYKCTRQIMYEKLGKSTRTVDSDLKSRV--L----------------------VIFFLQQTLGEAFADLAQKSPELQEE 130 (292)
Q Consensus 75 ~tyk~TKQ~l~EklGk~~~TvD~ELeakI--l----------------------~l~qtq~~lgd~F~~Ls~kEpeL~~e 130 (292)
+...-+.|.|..++|.++.|+|.+.|.-. | .++..|..++++|.+|-.-...-.+.
T Consensus 16 K~~~Ra~~~l~qk~G~~~~T~D~~F~~~e~~F~~le~~~~kL~k~~k~y~~ai~~~~~~q~~~ae~l~~ly~p~~~~~~~ 95 (243)
T 4a3a_A 16 KRLNRAQEKVLQKLGKADETKDEQFEEYVQNFKRQEAEGTRLQRELRGYLAAIKGMQEASMKLTESLHEVYEPDWYGRED 95 (243)
T ss_dssp ----CGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSTTHHH
T ss_pred HHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccCccc
Confidence 45556788999999999999999887755 1 47777788888888875322111111
Q ss_pred Hhhchhhh-hhhhHhhHHHHHhHHHHHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCcccccchHH
Q psy5190 131 FLCNSETQ-RNLTGTGEILLNALNLFVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNCSHLD 209 (292)
Q Consensus 131 F~~naetq-r~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r~e 209 (292)
.....+.. ..+...-..|. .-.+.-+.+|+. .+++..-+|++=++.++.||+|+..++.+.+-+.. .-.++.
T Consensus 96 ~~~~~~~~~~l~~d~~~~l~---d~~l~Pl~~l~~-~f~~i~k~I~KR~~KllDYD~~~~k~~kL~~K~~k---d~~kl~ 168 (243)
T 4a3a_A 96 VKMVGEKCDVLWEDFHQKLV---DGSLLTLDTYLG-QFPDIKNRIAKRSRKLVDYDSARHHLEALQSSKRK---DESRIS 168 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HTHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSC---CHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-HChHHHHHHHHhcchHHHHHHHHHHHHHHHhcccc---cHHHHH
Confidence 11111110 11111112221 122334677765 89999999999999999999999999999866642 236778
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCHHHHHH
Q psy5190 210 EAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNEPGLQA 268 (292)
Q Consensus 210 taqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~~~Le~ 268 (292)
.++...+.|+..|+.|=..+..=|=-|-+.|+..+..-|..|...-..||.........
T Consensus 169 kae~el~~Ak~~Ye~lN~~L~eELP~l~~~r~~~~~~~~~s~i~~Q~~f~~e~~k~~~~ 227 (243)
T 4a3a_A 169 KAEEEFQKAQKVFEEFNVDLQEELPSLWSRRVGFYVNTFKNVSSLEAKFHKEIAVLCHK 227 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999888888888999999999998888888888776555433
No 10
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.17 E-value=0.00012 Score=69.44 Aligned_cols=182 Identities=11% Similarity=0.079 Sum_probs=134.2
Q ss_pred hhhhhhhhhcccchhHHHHHHHHHHhCCCCccCchhhhHHHHHHHHHHHHHHHHHHHHh-------hcChhhHHHHhhch
Q psy5190 63 VSKIESIKNWGISTYKCTRQIMYEKLGKSTRTVDSDLKSRVLVIFFLQQTLGEAFADLA-------QKSPELQEEFLCNS 135 (292)
Q Consensus 63 ~~k~~~~k~W~~~tyk~TKQ~l~EklGk~~~TvD~ELeakIl~l~qtq~~lgd~F~~Ls-------~kEpeL~~eF~~na 135 (292)
.+.++.+++|--+-.+..++.+..- -.+..++..|.+.|...+ ...+++...+..|+
T Consensus 50 E~~~~~l~~~l~kl~k~~~~~~~~~----------------~~~~~a~~~f~~~l~~~~~~~~~~~~~d~~~~~~l~~f~ 113 (407)
T 4h8s_A 50 EEDAGTLTDYTNQLLQAMQRVYGAQ----------------NEMCLATQQLSKQLLAYEKQNFALGKGDEEVISTLHYFS 113 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHTTGGGSCCC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHhhhccccccCCcHHHHHHHHHHH
Confidence 5566667776666666555444311 134555566666665443 33455666788888
Q ss_pred hhhhhhhHhhHHHHHhHHH-HHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCcccccch-HHHHHH
Q psy5190 136 ETQRNLTGTGEILLNALNL-FVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNCSH-LDEAQR 213 (292)
Q Consensus 136 etqr~m~k~G~~Ll~aL~~-f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r-~etaqr 213 (292)
...+.+...-..|+..+.. ++.-|..|++..|......=|+|+.+.-+|++++.+...+..... -.+ .+++..
T Consensus 114 ~~~~ei~~~~~~L~~~~~~~i~~pL~~f~k~di~~~ke~kK~Fek~~~~Yd~~l~Ky~~~~k~k~-----~~~~~~e~~~ 188 (407)
T 4h8s_A 114 KVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKE-----NEKVKTEVGK 188 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSTTC-----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-----chHHHHHHHH
Confidence 8888888777777766654 556799999999999999999999999999999999876653322 123 345677
Q ss_pred HHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCHHH
Q psy5190 214 NFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNEPG 265 (292)
Q Consensus 214 ~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~~~ 265 (292)
++..+|..|..-+.|.+.+|.-|..++-..+...|..|.+|...||....+.
T Consensus 189 ~l~~~Rk~f~~asldyv~~l~~lq~rk~~e~le~l~~~~~a~~~~f~~~~~~ 240 (407)
T 4h8s_A 189 EVAAARRKQHLSSLQYYCALNALQYRKQMAMMEPMIGFAHGQINFFKKGAEM 240 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999998888889999999999999988766554
No 11
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=97.48 E-value=0.0057 Score=53.97 Aligned_cols=171 Identities=9% Similarity=0.130 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHhhcC-----h-hhH-------HHHhhchhhhhhhhHhhHHHHHhHHHHHHhHHHhhh-------
Q psy5190 105 VIFFLQQTLGEAFADLAQKS-----P-ELQ-------EEFLCNSETQRNLTGTGEILLNALNLFVSSVNTLCN------- 164 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~kE-----p-eL~-------~eF~~naetqr~m~k~G~~Ll~aL~~f~sdl~Tf~~------- 164 (292)
+-+.+.+.|+..+..|+.+- + .+. .+...-|..|..++.+=..++.+|..|..+...-+-
T Consensus 43 eRa~iE~eYak~L~kLa~~~~~~~~~gs~~~~w~~~~~~~e~~a~~h~~~a~~l~~~~~~l~~~~~~~~~~rK~~~~~~~ 122 (276)
T 2v0o_A 43 ERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVA 122 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCSSSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55666677777777777752 1 122 222233444544444434566777777766654321
Q ss_pred ---hhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCccccc----chHHHH-------HHHHHHHHHHHHhHHhHHH
Q psy5190 165 ---KTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNC----SHLDEA-------QRNFQTHRENFEKLRNDVV 230 (292)
Q Consensus 165 ---KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l----~r~eta-------qr~~q~aK~rFdKLR~DV~ 230 (292)
++..+-..++...+.||-.|...|.+++.+..+..+ ...+ .|+.++ ......++.+|.....+++
T Consensus 123 ~~~~~~~~~~~~~~~l~Kak~~Y~~~c~e~e~~~~~~~s-~k~~eK~~~k~~ka~~~Y~~~v~~~n~~~~~~~~~~~~~~ 201 (276)
T 2v0o_A 123 GTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGAT-QREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETA 201 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455678889999999999999887643111 1111 222223 2345566667777788899
Q ss_pred HHHhhhcccchhHHHHHHHHHHHHHHHHHhcCH---HHHHHHhhhcccc
Q psy5190 231 VKLRFLDENRIKVMHKQLLLFHNAISAYFSGNE---PGLQATLKQFNIK 276 (292)
Q Consensus 231 vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~---~~Le~tl~~F~i~ 276 (292)
..++-|++.|+..|...|..|.+.+........ +.|..++.....+
T Consensus 202 ~~lQ~le~~R~~~lk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~ 250 (276)
T 2v0o_A 202 QKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVE 250 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhCCHH
Confidence 999999999999999999999988886554433 3344444444443
No 12
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=97.28 E-value=0.0098 Score=56.88 Aligned_cols=143 Identities=13% Similarity=0.175 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHhh--------cChhhHHHHhhchhhhhhhh----Hhh----HHHHHhHHHHHHhHHHhhhhhhhhHHHH
Q psy5190 110 QQTLGEAFADLAQ--------KSPELQEEFLCNSETQRNLT----GTG----EILLNALNLFVSSVNTLCNKTIEDTLVT 173 (292)
Q Consensus 110 q~~lgd~F~~Ls~--------kEpeL~~eF~~naetqr~m~----k~G----~~Ll~aL~~f~sdl~Tf~~KAI~DTllT 173 (292)
+..||..|..||. ..+.|+.++...|++...+. .++ ..|..+|+.++..+..+-. ++..-..+
T Consensus 226 ~~~l~~~l~~l~~~~~~~~~~~~~~Ls~aL~~l~~~~e~i~~l~~~Qa~~d~~~L~E~L~~Y~~ll~s~Kd-ll~~R~~a 304 (386)
T 4akv_A 226 FQKLGSAFQAISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPD-IIHLQKGA 304 (386)
T ss_dssp HHHHHHHHHHHHHHTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 3568888888887 34458888888887654443 333 4677888888888765544 33333333
Q ss_pred HHHHHHhhHhHHHHHhhHHHhhccccCcccccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHH
Q psy5190 174 VRQYENARVEYDAYRTDLELLLQVTSNVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHN 253 (292)
Q Consensus 174 IkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~n 253 (292)
+.+|..|. + +..+.. .. +...+++..+|+.+-..+..=|+=+...|+.+|...|..|..
T Consensus 305 L~k~~ea~--------k---l~~~~K--------~~--~~~~~e~~~r~e~IS~~~~~El~rF~~~Rv~Dfk~~l~eyle 363 (386)
T 4akv_A 305 FAKVKESQ--------R---MSDEGR--------MV--QDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLR 363 (386)
T ss_dssp HHHHHHHH--------H---HHHTTS--------SC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--------H---HHHhCC--------cc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333331 1 111111 11 234567889999999999999999999999999999999999
Q ss_pred HHHHHHhcCHHHHHHHhhhcc
Q psy5190 254 AISAYFSGNEPGLQATLKQFN 274 (292)
Q Consensus 254 Al~ay~sgn~~~Le~tl~~F~ 274 (292)
.-.+|+....+.++.++.+|.
T Consensus 364 ~qi~~~~~~~~~le~~l~~f~ 384 (386)
T 4akv_A 364 QQILFYQRVGQQLEKTLRMYD 384 (386)
T ss_dssp HHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999985
No 13
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=97.05 E-value=0.025 Score=53.41 Aligned_cols=145 Identities=12% Similarity=0.215 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHhhc--------ChhhHHHHhhchhhhhhhhH----hh----HHHHHhHHHHHHhHHHhhhhhhhhHH
Q psy5190 108 FLQQTLGEAFADLAQK--------SPELQEEFLCNSETQRNLTG----TG----EILLNALNLFVSSVNTLCNKTIEDTL 171 (292)
Q Consensus 108 qtq~~lgd~F~~Ls~k--------EpeL~~eF~~naetqr~m~k----~G----~~Ll~aL~~f~sdl~Tf~~KAI~DTl 171 (292)
..+..||.+|..||.- .+.|+.++...|++...+.. +. ..|..+|+..+..+..+.. ++.+-.
T Consensus 204 ~~~~~l~~~l~~l~~~~~~~~~~~~~~L~~al~~l~~~~~~i~~l~~~qa~~d~~~l~E~L~~Y~~~l~avKd-~l~~r~ 282 (366)
T 3dyt_A 204 KEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPD-IIGTHK 282 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHSGGGTHHHHHHHHHHHHHHHTTHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 3457889999999962 44588888888887644443 22 4667777777776664432 222222
Q ss_pred HHHHHHHHhhHhHHHHHhhHHHhhccccCcccccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHH
Q psy5190 172 VTVRQYENARVEYDAYRTDLELLLQVTSNVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLF 251 (292)
Q Consensus 172 lTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~ 251 (292)
.++.+|..++ + +..+.. +. +..+++++.+|+.+-..+..=|+-++..|+.+|...|..|
T Consensus 283 ~aL~k~~e~~--------k---l~~~~K--------~~--~~~~~~~~~r~e~is~~~~~El~rF~~~r~~Dfk~~l~~y 341 (366)
T 3dyt_A 283 GAIEKVKESD--------K---LVATSK--------IT--LQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLY 341 (366)
T ss_dssp HHHHHHHTHH--------H---HHHTTS--------SC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--------H---HHhccC--------cc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222221 1 111111 11 2346778899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHhhhcc
Q psy5190 252 HNAISAYFSGNEPGLQATLKQFN 274 (292)
Q Consensus 252 ~nAl~ay~sgn~~~Le~tl~~F~ 274 (292)
...-..|+....+.+++++.+|.
T Consensus 342 l~~qi~~~k~~~~~w~~~l~~~~ 364 (366)
T 3dyt_A 342 LEQQVQFYETIAEKLRQALSRFP 364 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999885
No 14
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=96.90 E-value=0.075 Score=47.55 Aligned_cols=113 Identities=9% Similarity=0.120 Sum_probs=73.8
Q ss_pred hhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccC-------cccc-----------cchHHHH-------HHHHHHHHH
Q psy5190 166 TIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSN-------VDSN-----------CSHLDEA-------QRNFQTHRE 220 (292)
Q Consensus 166 AI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~-------~~~~-----------l~r~eta-------qr~~q~aK~ 220 (292)
+..+-..+.+..+.||-.|+..|.+.+........ .... ..++..+ .......+.
T Consensus 126 ~~k~~~~~~~~l~kaKk~Y~~~c~e~~~a~~~~~~a~~~~~~s~k~~~K~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~ 205 (290)
T 3i2w_A 126 AQKPWAKLLAKVEKAKADYHSACKTERSATNQERNANADSSLSPDQVKKMHDRVQKTKDQVQKCREKYEQAIAEITKYNS 205 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTSCC--------------------CTTSSTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 33444556778899999999999886554321110 0011 1122333 345566677
Q ss_pred HHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHH-HH---HhcCHHHHHHHhhhcccccc
Q psy5190 221 NFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAIS-AY---FSGNEPGLQATLKQFNIKTN 278 (292)
Q Consensus 221 rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~-ay---~sgn~~~Le~tl~~F~i~~~ 278 (292)
+|..-.-.++.+++-|++.|+..|...|..|.+.+. .. ...+.+.|..++....++-|
T Consensus 206 ~~~~~~p~~~~~~Q~lee~Ri~~lk~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~id~~~D 267 (290)
T 3i2w_A 206 VYIEDMTSVFEKCQTFEKTRLQFFKEILFNVHSCLDLTKVQSLPQIYEEFSHTINNADQQKD 267 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCTTHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHhcChHHH
Confidence 899999999999999999999999999999999974 21 12345556666666555533
No 15
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=96.80 E-value=0.059 Score=47.97 Aligned_cols=132 Identities=11% Similarity=0.103 Sum_probs=82.4
Q ss_pred HHHHhHHHHHHhHHHh-------hhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCc-----c--cccch----H
Q psy5190 147 ILLNALNLFVSSVNTL-------CNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNV-----D--SNCSH----L 208 (292)
Q Consensus 147 ~Ll~aL~~f~sdl~Tf-------~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~-----~--~~l~r----~ 208 (292)
.+..+|.-|..+.... ..++..+-..+++..+.||-.|+.+|.+++.+....... . ..+.| +
T Consensus 95 ~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~~~~s~~~~eK~~~k~ 174 (301)
T 2efk_A 95 RVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADVEKAKQQA 174 (301)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCHHHHHHHHHHH
Confidence 3456666666665543 344445555677888889999999998887665432110 0 11222 1
Q ss_pred HHHHHHHHHH---------------HHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHh---cCHHHHHHHh
Q psy5190 209 DEAQRNFQTH---------------RENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFS---GNEPGLQATL 270 (292)
Q Consensus 209 etaqr~~q~a---------------K~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~s---gn~~~Le~tl 270 (292)
...+..+..+ +..|..-..+++..++-|++.|+..|...|..|.+....... .+.+.|..++
T Consensus 175 ~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~p~~~~~lQ~lee~r~~~lk~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 254 (301)
T 2efk_A 175 HLRSHMAEESKNEYAAQLQRFNRDQAHFYFSQMPQIFDKLQDMDERRATRLGAGYGLLSEAELEVVPIIAKCLEGMKVAA 254 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 1222222222 345677777889999999999999999999999996554443 3455666666
Q ss_pred hhcccccc
Q psy5190 271 KQFNIKTN 278 (292)
Q Consensus 271 ~~F~i~~~ 278 (292)
.....+-|
T Consensus 255 ~~id~~~D 262 (301)
T 2efk_A 255 NAVDPKND 262 (301)
T ss_dssp HHCCHHHH
T ss_pred HhcCchhh
Confidence 66555433
No 16
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=96.73 E-value=0.06 Score=47.80 Aligned_cols=174 Identities=11% Similarity=0.193 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHhhcC----------h---hhHHHHhhc-------hhhhhhhhHh-hHHHHHhHHHHHHhHHHhh
Q psy5190 105 VIFFLQQTLGEAFADLAQKS----------P---ELQEEFLCN-------SETQRNLTGT-GEILLNALNLFVSSVNTLC 163 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~kE----------p---eL~~eF~~n-------aetqr~m~k~-G~~Ll~aL~~f~sdl~Tf~ 163 (292)
+-+...+.||..+..|+.+- | .+...|... |..|..++.+ ...+..+|..|..+....+
T Consensus 39 eRa~iE~eYak~L~kLa~~~~~~~~~~~~~~~~~t~~~aw~~~~~~~e~~a~~h~~~a~~l~~~v~~~l~~~~~~~~~~r 118 (305)
T 2efl_A 39 ERTEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCKAFISNLNEMNDYAGQHEVISENMASQIIVDLARYVQELKQER 118 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCC-------CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777888777777642 1 122223222 3334444433 2455677777777666533
Q ss_pred h-------hhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhcccc----CcccccchHHHHHH------------------H
Q psy5190 164 N-------KTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTS----NVDSNCSHLDEAQR------------------N 214 (292)
Q Consensus 164 ~-------KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~----~~~~~l~r~etaqr------------------~ 214 (292)
- ++..+-..++...+.||-.|...|.+++.+..... +....-..+++++. +
T Consensus 119 K~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~~~~~~~~~~~~s~~~~eK~~~k~~~~~~~~~~a~~~Y~~~ 198 (305)
T 2efl_A 119 KSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADINVTKADVEKARQQAQIRHQMAEDSKADYSSI 198 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 33334455667777899999999988887654211 00000011222211 2
Q ss_pred HHHH----HHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHh---cCHHHHHHHhhhcccccc
Q psy5190 215 FQTH----RENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFS---GNEPGLQATLKQFNIKTN 278 (292)
Q Consensus 215 ~q~a----K~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~s---gn~~~Le~tl~~F~i~~~ 278 (292)
++.+ +..|.....+++..++-|++.|+..|...|..|.+....... .+.+.|..++..+..+-|
T Consensus 199 v~~~n~~~~~~~~~~~~~~~~~lQ~le~~r~~~lk~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~id~~~D 269 (305)
T 2efl_A 199 LQKFNHEQHEYYHTHIPNIFQKIQEMEERRIVRMGESMKTYAEVDRQVIPIIGKCLDGIVKAAESIDQKND 269 (305)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhh
Confidence 2222 455777788899999999999999999999999998766553 345556666666555433
No 17
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=96.56 E-value=0.37 Score=43.46 Aligned_cols=112 Identities=9% Similarity=0.143 Sum_probs=71.1
Q ss_pred hhhHHHHHHHHHHhhHhHHHHHhhHHHhhcccc-----Cc--ccccch----HH-------HH-------HHHHHHHHHH
Q psy5190 167 IEDTLVTVRQYENARVEYDAYRTDLELLLQVTS-----NV--DSNCSH----LD-------EA-------QRNFQTHREN 221 (292)
Q Consensus 167 I~DTllTIkkYE~AR~EYdAyrl~leem~~e~~-----~~--~~~l~r----~e-------ta-------qr~~q~aK~r 221 (292)
.-+-....+..+.||-.|...|.+++.+..... .. ...+.| +. .+ .......+..
T Consensus 149 ~k~~~~~~~~l~KaK~~Y~~~c~e~e~a~~~~~~~~~d~~~~~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~ 228 (312)
T 3abh_A 149 QKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQ 228 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHTCTTCCSHHHHGGGTTTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 333344556789999999999999888764210 00 011111 11 11 2344555667
Q ss_pred HHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH----hcCHHHHHHHhhhcccccc
Q psy5190 222 FEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYF----SGNEPGLQATLKQFNIKTN 278 (292)
Q Consensus 222 FdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~----sgn~~~Le~tl~~F~i~~~ 278 (292)
|..-=.+++..++-|++.|+..|...|..|.+++.... ..+.+.|..++.....+-|
T Consensus 229 ~~~~~~~~~~~~Q~lee~Rl~~lk~~l~~~~~~~~~~~~~~~~~~~~~l~~~i~~id~~~D 289 (312)
T 3abh_A 229 YMENMEQVFEQCQQFEEKRLRFFREVLLEVQKHLDLSNVAGYKAIYHDLEQSIRAADAVED 289 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSTTHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHhCChHHH
Confidence 77766788999999999999999999999999965431 1233335565665555543
No 18
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=96.56 E-value=0.084 Score=51.41 Aligned_cols=105 Identities=10% Similarity=0.206 Sum_probs=65.1
Q ss_pred HHHHHHHHhhHhHHHHHhhHHHhhccccC-------cccccch----HHHHHHHH--------------HHHHHHHHhHH
Q psy5190 172 VTVRQYENARVEYDAYRTDLELLLQVTSN-------VDSNCSH----LDEAQRNF--------------QTHRENFEKLR 226 (292)
Q Consensus 172 lTIkkYE~AR~EYdAyrl~leem~~e~~~-------~~~~l~r----~etaqr~~--------------q~aK~rFdKLR 226 (292)
...+..+.||-.|...|.+.+........ ....+.| +++++..+ ...+..|....
T Consensus 147 ~~~~~l~KaKk~Y~~~cke~e~a~~~~~~a~~d~~~t~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~y~~~~ 226 (486)
T 3haj_A 147 KKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENM 226 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566788888888888877766422110 0111222 22222222 22334566677
Q ss_pred hHHHHHHhhhcccchhHHHHHHHHHHHHHHHH----HhcCHHHHHHHhhhcccc
Q psy5190 227 NDVVVKLRFLDENRIKVMHKQLLLFHNAISAY----FSGNEPGLQATLKQFNIK 276 (292)
Q Consensus 227 ~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay----~sgn~~~Le~tl~~F~i~ 276 (292)
..++..++-|++.|+..|...|..|.+.+..- ...+.+.|..++....++
T Consensus 227 ~~~~~~lQ~lEeeRi~~lK~~L~~y~~~l~~~~~~~~~~~~e~l~~~i~~id~~ 280 (486)
T 3haj_A 227 EQVFEQCQQFEEKRLRFFREVLLEVQKHLDLSNVAGYKAIYHDLEQSIRAADAV 280 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHhCCHH
Confidence 78899999999999999999999999988432 223445555555554444
No 19
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=96.52 E-value=0.19 Score=46.44 Aligned_cols=115 Identities=10% Similarity=0.201 Sum_probs=70.3
Q ss_pred hhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCcc-------cccch----HHHHHHH--------------HHHH
Q psy5190 164 NKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVD-------SNCSH----LDEAQRN--------------FQTH 218 (292)
Q Consensus 164 ~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~-------~~l~r----~etaqr~--------------~q~a 218 (292)
.|+.-+-....+..+.||-.|...|.+++.+........ ..+.| +.++.+. ....
T Consensus 146 ~k~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a~~~~~~~~~d~~~~~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~ 225 (350)
T 3aco_A 146 RKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQG 225 (350)
T ss_dssp HHHTSHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHTTSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333345567889999999999999888765321100 11222 2222222 2233
Q ss_pred HHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHH----HhcCHHHHHHHhhhcccccc
Q psy5190 219 RENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAY----FSGNEPGLQATLKQFNIKTN 278 (292)
Q Consensus 219 K~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay----~sgn~~~Le~tl~~F~i~~~ 278 (292)
+..|..-=.+++..++-|++.|+..|...|..|.+++... ...+.+.|..++..+..+-|
T Consensus 226 ~~~~~~~~~~~~~~~Q~lee~Rl~~lk~~l~~~~~~l~~~~~~~~~~~~~~l~~~i~~id~~~D 289 (350)
T 3aco_A 226 TPQYMENMEQVFEQCQQFEEKRLRFFREVLLEVQKHLDLSNVAGYKAIYHDLEQSIRAADAVED 289 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCHHHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhCCHHHH
Confidence 3445555557788999999999999999999999996522 22233445555555555433
No 20
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=96.17 E-value=0.52 Score=42.92 Aligned_cols=113 Identities=10% Similarity=0.170 Sum_probs=70.8
Q ss_pred hhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccc-----cC--cccccch----HHHHHH--------------HHHHHHH
Q psy5190 166 TIEDTLVTVRQYENARVEYDAYRTDLELLLQVT-----SN--VDSNCSH----LDEAQR--------------NFQTHRE 220 (292)
Q Consensus 166 AI~DTllTIkkYE~AR~EYdAyrl~leem~~e~-----~~--~~~~l~r----~etaqr--------------~~q~aK~ 220 (292)
+..+-..+.+..+.||-.|...|.+.+...... .. ....+.| ++++++ ....++.
T Consensus 139 ~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a~~~~~~~~~~~~~s~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~ 218 (337)
T 2x3v_A 139 AQKPWAKKMKELEAAKKAYHLACKEERLAMTREMNSKTEQSVTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKTTP 218 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 334444567788889999999998866543221 00 0011222 222222 2333445
Q ss_pred HHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHH----HhcCHHHHHHHhhhcccccc
Q psy5190 221 NFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAY----FSGNEPGLQATLKQFNIKTN 278 (292)
Q Consensus 221 rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay----~sgn~~~Le~tl~~F~i~~~ 278 (292)
.|..-=.+++..++-|++.|+..|...|..|.+++... ...+.+.|..++..+..+-|
T Consensus 219 ~~~~~~~~~~~~~Q~le~~Rl~~lk~~l~~~~~~~~~~~~~~~~~~~~~l~~~i~~id~~~D 280 (337)
T 2x3v_A 219 QYMEGMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYMHVYRELEQAIRGADAQED 280 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSTHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHcChHHH
Confidence 56666678899999999999999999999999987532 33345566666666665543
No 21
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=96.01 E-value=0.14 Score=46.26 Aligned_cols=105 Identities=18% Similarity=0.344 Sum_probs=78.2
Q ss_pred HHHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCcccccchHHHHHHHHHHHHHHHHhHHhHHHHHH
Q psy5190 154 LFVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKL 233 (292)
Q Consensus 154 ~f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKL 233 (292)
+++.-+..|.. .|+..+.-.+.+..-|.=||-|-++|+++..... -.+|++.-|+.+..+.+.|...=.|.+.||
T Consensus 102 rllekiqkyfQ-~IEtlK~ql~nf~e~RLiYDHYKlKvdELEK~~K----dSeKI~RNQsKLssAEtaYkqvcsDiInkM 176 (294)
T 3caz_A 102 RLLEKIQKYRQ-EIEEIKKEYKETDKYRERYDHYKVKLDNLEKKNK----DQERIERNQQKFKDAEAAYSSVCADLIQKM 176 (294)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHhHHHHHhccc----hHHHHHHhHHHhhhHHHHHHHHHHHHHHHH
Confidence 33444444444 6677777889999999999999999999975432 337999999999999999999999999999
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHhc---CHHHHHHHh
Q psy5190 234 RFLDENRIKVMHKQLLLFHNAISAYFSG---NEPGLQATL 270 (292)
Q Consensus 234 dLLdenRvkvm~~QL~~~~nAl~ay~sg---n~~~Le~tl 270 (292)
+-|=-|+++ .|..|-++.|+- -+.+|+.+.
T Consensus 177 nkll~n~~r-------iineaasavwstqlqyakaleaaa 209 (294)
T 3caz_A 177 ETVWKKHVS-------IFAEAASAVWSTQLQYAKALEAAA 209 (294)
T ss_dssp HHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 966555555 555566666653 245566553
No 22
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=95.69 E-value=0.93 Score=41.23 Aligned_cols=165 Identities=13% Similarity=0.121 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHHhh------cChhhHHHHhhchhhhhhhhHhhHHHHHhHHHHHHhHHHhhhhhhhhHHHHHH---
Q psy5190 105 VIFFLQQTLGEAFADLAQ------KSPELQEEFLCNSETQRNLTGTGEILLNALNLFVSSVNTLCNKTIEDTLVTVR--- 175 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~------kEpeL~~eF~~naetqr~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~DTllTIk--- 175 (292)
.++++..+|-|+|..+|. -..+++..+..-++.||.++..-+...+++ +.++-+=+.+-|++=.-.|.
T Consensus 47 ~~~~a~~~f~dal~kia~~A~~s~gs~elG~~L~~i~~~~r~ie~~l~~~~~~~---~~~li~pL~~kie~d~K~v~~~~ 123 (253)
T 2ykt_A 47 GVTYAAKGYFDALVKMGELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSF---HNELLTQLEQKVELDSRYLSAAL 123 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhHHHHHHHH
Confidence 688899999999988887 234699999999999999998777666554 34444444445554333333
Q ss_pred -H----HHHhhHhHHHHHhhHHHhhcccc---CcccccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHH
Q psy5190 176 -Q----YENARVEYDAYRTDLELLLQVTS---NVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQ 247 (292)
Q Consensus 176 -k----YE~AR~EYdAyrl~leem~~e~~---~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~Q 247 (292)
+ |-.++-++.-...+++.+..... +...-..+......-+-.-+..+++.-.+-+-..=+-+-.|.-.+...
T Consensus 124 K~~~~e~k~~~~~l~K~~~e~~kl~KK~k~gk~~~~~~~~~~~~~e~v~~~~~~le~~~~~~lr~aL~EERrRycflv~~ 203 (253)
T 2ykt_A 124 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVSDGYKTALTEERRRFCFLVEK 203 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHhhccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 23344444444333333332221 100011333333334444445555555555555555566677777888
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHhhh
Q psy5190 248 LLLFHNAISAYFSGNEPGLQATLKQ 272 (292)
Q Consensus 248 L~~~~nAl~ay~sgn~~~Le~tl~~ 272 (292)
+..|.+....|+..+...|.+.+..
T Consensus 204 ~~~v~~~~~~~h~~~~~~L~~~l~~ 228 (253)
T 2ykt_A 204 QCAVAKNSAAYHSKGKELLAQKLPL 228 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 8888888889999888888776643
No 23
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=95.47 E-value=1.5 Score=40.21 Aligned_cols=107 Identities=12% Similarity=0.158 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhhHhHHHHHhhHHHhhccccC-----------cccccchHHHH--------------HHHHHHHHHHHHh
Q psy5190 170 TLVTVRQYENARVEYDAYRTDLELLLQVTSN-----------VDSNCSHLDEA--------------QRNFQTHRENFEK 224 (292)
Q Consensus 170 TllTIkkYE~AR~EYdAyrl~leem~~e~~~-----------~~~~l~r~eta--------------qr~~q~aK~rFdK 224 (292)
-...++..+.+|=.|...|.+.+........ ....-.++..+ ...+...+.+|..
T Consensus 143 ~~~~~~~l~kaKk~Y~~~c~e~~~a~~~~~~~~~d~~~s~ke~~K~~~k~~k~~~~~~~a~~~Y~~~l~~~n~~~~~y~~ 222 (320)
T 3m3w_A 143 WLKRLKEVEASKKSYHTARKDEKTAQTRESHAKADSSMSQEQLRKLQERVGRCTKEAEKMKTQYEQTLAELNRYTPRYME 222 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSCCC---CCSSSSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3345677899999999999986665432111 00111222222 2334444455555
Q ss_pred HHhHHHHHHhhhcccchhHHHHHHHHHHHHHHH----HHhcCHHHHHHHhhhcccc
Q psy5190 225 LRNDVVVKLRFLDENRIKVMHKQLLLFHNAISA----YFSGNEPGLQATLKQFNIK 276 (292)
Q Consensus 225 LR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~a----y~sgn~~~Le~tl~~F~i~ 276 (292)
-=..++.+++-|++.|+..|...|..|++.+.- -...+.+.+..++....++
T Consensus 223 ~~~~~~~~~Q~lEe~Ri~~lk~~l~~~~~~~~~~~~~~~~~~~e~~~~~i~~id~~ 278 (320)
T 3m3w_A 223 DMEQAFESCQAAERQRLLFFKDVLLTLHQHLDLSSSDKFHELHRDLQQSIEAASDE 278 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHhcCHH
Confidence 455789999999999999999999999986621 1223334555555554544
No 24
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=93.93 E-value=1.1 Score=42.76 Aligned_cols=174 Identities=11% Similarity=0.092 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCh-----------hhHHHHhhc-------hhhhhhhhHh-hHHHHHhHHHHHHhHHHhhhh
Q psy5190 105 VIFFLQQTLGEAFADLAQKSP-----------ELQEEFLCN-------SETQRNLTGT-GEILLNALNLFVSSVNTLCNK 165 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~kEp-----------eL~~eF~~n-------aetqr~m~k~-G~~Ll~aL~~f~sdl~Tf~~K 165 (292)
+-+.+.+.|+..+..|+.+-. .+...|..+ |..|..++.+ ...++.+|..++.++...+-+
T Consensus 37 eRA~IE~eYAk~L~kLakk~~~k~~~~~~~~~tl~~aW~~ll~ete~~a~~H~~lae~L~~~v~~~l~~~~ke~~~~rK~ 116 (406)
T 4dyl_A 37 QRVKSDREYAGLLHHMSLQDSGGQSRAISPDSPISQSWAEITSQTEGLSRLLRQHAEDLNSGPLSKLSLLIRERQQLRKT 116 (406)
T ss_dssp HHHHHHHHHHHHHHHHC------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888888888886521 122223222 2233322221 123456777777776654432
Q ss_pred -------hhhhHHHHH-HHHHHhhHhHHHHHhhHHHhhccccCcc--cccch----HHHHHHHHHHHHHH----------
Q psy5190 166 -------TIEDTLVTV-RQYENARVEYDAYRTDLELLLQVTSNVD--SNCSH----LDEAQRNFQTHREN---------- 221 (292)
Q Consensus 166 -------AI~DTllTI-kkYE~AR~EYdAyrl~leem~~e~~~~~--~~l~r----~etaqr~~q~aK~r---------- 221 (292)
+-.+-..++ +..+.+|-.|+.+|.+++.......... ..+.| +..+......++..
T Consensus 117 ~~~~~~klqk~~~k~~~~~lekaKk~Y~~~cke~e~A~~k~~~~~k~ke~eK~~~k~~k~~~~~~~a~neY~~~l~~~N~ 196 (406)
T 4dyl_A 117 YSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYQEASKDKDRDKAKDKYVRSLWKLFAHHNRYVLGVRAAQL 196 (406)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223334456 6888899999999998887664322111 11222 22222222223322
Q ss_pred -----HHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH---hcCHHHHHHHhhhcccccc
Q psy5190 222 -----FEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYF---SGNEPGLQATLKQFNIKTN 278 (292)
Q Consensus 222 -----FdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~---sgn~~~Le~tl~~F~i~~~ 278 (292)
|...-.+++.+++-|++.|+..|...|..|.+...... ..+.+.|..++.....+-|
T Consensus 197 ~~~~yy~~~lp~~~d~lQ~lEe~Ri~~lk~~L~~~~~~~~~~~~~~~~~~~~l~~~i~~id~~~D 261 (406)
T 4dyl_A 197 HHQHHHQLLLPGLLRSLQDLHEEMACILKEILQEYLEISSLVQDEVVAIHREMAAAAARIQPEAE 261 (406)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHCCGGGT
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHcCcHHH
Confidence 44566677899999999999999999999998776432 2355666666666666654
No 25
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=91.66 E-value=2.1 Score=39.76 Aligned_cols=56 Identities=14% Similarity=0.322 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q psy5190 214 NFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNEPGLQAT 269 (292)
Q Consensus 214 ~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~~~Le~t 269 (292)
...+++.+.+.==--++++++-||+.|++.|...|..|++.++.+...+.+.-+.+
T Consensus 192 ~le~a~~qWes~aP~~fe~fQ~lEEeRL~~Lkd~L~~y~~~~sd~~~~~~~~~E~~ 247 (287)
T 3g9g_A 192 HLEEARRQWDQQSPYLFELFETIDYNRLDTLKNCMLRFQTSFSDYLLNTTKECETV 247 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666799999999999999999999999999999999755444433
No 26
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=86.02 E-value=20 Score=32.64 Aligned_cols=88 Identities=11% Similarity=0.135 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHhh-------cChhhHHHHhhchhhhhhhhHhhHHHHHhHHHHHHhHHHhhhhhhhhHHHHHHHH
Q psy5190 105 VIFFLQQTLGEAFADLAQ-------KSPELQEEFLCNSETQRNLTGTGEILLNALNLFVSSVNTLCNKTIEDTLVTVRQY 177 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~-------kEpeL~~eF~~naetqr~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~DTllTIkkY 177 (292)
.++++..+|-|+|..+|. -+.+++..+..-++.||.++..-+. -++-|+.+|-+=+.+-|++=.-+|..+
T Consensus 49 ~~~~a~~af~Da~qKvad~A~~s~g~s~elG~~L~~i~~~hr~ie~~l~~---~~k~~~~eli~pLe~k~e~d~k~~~~~ 125 (253)
T 2d1l_A 49 TTVVAAAAFLDAFQKVADMATNTRGGTREIGSALTRMCMRHRSIEAKLRQ---FSSALIDCLINPLQEQMEEWKKVANQL 125 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSTHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcccCCcchHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 588888999999999877 2456999999999999999976654 455677899999999999888888876
Q ss_pred HH-hhHhHHHHHhhHHHhh
Q psy5190 178 EN-ARVEYDAYRTDLELLL 195 (292)
Q Consensus 178 E~-AR~EYdAyrl~leem~ 195 (292)
++ -.-||..||.+++.-.
T Consensus 126 ~K~~~~~~k~~r~elkk~~ 144 (253)
T 2d1l_A 126 DKDHAKEYKKARQEIKKKS 144 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHH
Confidence 65 2456788887765443
No 27
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=68.77 E-value=45 Score=29.89 Aligned_cols=159 Identities=15% Similarity=0.162 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHhhcChhhHHHHhhchh----hhhhhhHhhHHHHHhHHHHHHhHHHhhhhhhhhHHHHH--HHHHHhhH
Q psy5190 109 LQQTLGEAFADLAQKSPELQEEFLCNSE----TQRNLTGTGEILLNALNLFVSSVNTLCNKTIEDTLVTV--RQYENARV 182 (292)
Q Consensus 109 tq~~lgd~F~~Ls~kEpeL~~eF~~nae----tqr~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~DTllTI--kkYE~AR~ 182 (292)
.-+.|..+|+.|++.+.+|++.|..-|. ++..|..+|++...--+.=. .|..=++.-+.| +.|. |.++|.+.
T Consensus 29 ~~~~l~~~~~~l~qtq~~lG~~f~~l~~~~p~l~~~f~~~~~~~r~~~k~g~-~Ll~~L~~f~s~-l~T~~~kaI~DT~l 106 (224)
T 1i4d_A 29 LGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCKNGE-TLLGAVNFFVSS-INTLVTKTMEDTLM 106 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHHHH-HHHHHhHhccHHHH
Confidence 3467899999999999999999988764 46777777776653222111 111111222222 2333 24556554
Q ss_pred ---hHHHHHhhHHHh--hccccCcccccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHH-HHHHHHHHHHHH
Q psy5190 183 ---EYDAYRTDLELL--LQVTSNVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVM-HKQLLLFHNAIS 256 (292)
Q Consensus 183 ---EYdAyrl~leem--~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm-~~QL~~~~nAl~ 256 (292)
.|..+|..+-.. +.+..+.. ++--...-++..+..+|..-|. --.||+.=---++..+ .+....++..+.
T Consensus 107 TIk~ye~aR~EY~ay~~~~ee~~~~---~~~~~~l~rve~~q~~~~~ak~-kf~kLR~DV~~KleLLd~~r~kv~~~qL~ 182 (224)
T 1i4d_A 107 TVKQYEAARLEYDAYRTDLEELSLG---PRDAGTRGRLESAQATFQAHRD-KYEKLRGDVAIKLKFLEENKIKVMHKQLL 182 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHhHHHHHhhHHHhhcc---cccccchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 344444433221 11121111 1111112233333333333332 1122222222233444 455667888888
Q ss_pred HHHhcCHHHHHHHhhhc
Q psy5190 257 AYFSGNEPGLQATLKQF 273 (292)
Q Consensus 257 ay~sgn~~~Le~tl~~F 273 (292)
.|++.-..-.+.+-+.+
T Consensus 183 ~~~~al~~y~~~~~~~l 199 (224)
T 1i4d_A 183 LFHNAVSAYFAGNQKQL 199 (224)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHH
Confidence 88887766666665554
No 28
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=54.08 E-value=1.2e+02 Score=27.11 Aligned_cols=158 Identities=15% Similarity=0.206 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHHhh---cCh---hhHHHHhhchhhhhhhhHhhHHHHHhHHHHHHhHHHhhhhhhh-hHHH---HH
Q psy5190 105 VIFFLQQTLGEAFADLAQ---KSP---ELQEEFLCNSETQRNLTGTGEILLNALNLFVSSVNTLCNKTIE-DTLV---TV 174 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~---kEp---eL~~eF~~naetqr~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~-DTll---TI 174 (292)
.++.+.++|=|+|..||. .+| +||..+..-+++||.+...-+.. ++.|+.+|-+=+.+-|+ |+.- +.
T Consensus 45 a~~~A~~~y~dA~~Kige~A~~S~~skeLG~vL~qis~~hR~i~~~le~~---~k~f~~elI~pLE~k~e~D~k~i~~~~ 121 (222)
T 3ok8_A 45 ALSEAAEVYFSAIQKIGEQALQSSTSQILGEILVQMSDTQRHLNSDLEVV---VQTFHGDLLQHMEKNTKLDMQFIKDSC 121 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577788888888877765 333 59999999999999998765543 45566677666666666 5443 34
Q ss_pred HHHHH-hhHh---HHHHHhhHHHhhccccCcccccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHH
Q psy5190 175 RQYEN-ARVE---YDAYRTDLELLLQVTSNVDSNCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLL 250 (292)
Q Consensus 175 kkYE~-AR~E---YdAyrl~leem~~e~~~~~~~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~ 250 (292)
|+|+. -|-- |......++.+....+ ....+ ....+..-+..+++.-.+-+...-+=+..|.-.+.---..
T Consensus 122 K~y~~e~k~~~~~leK~~~elkK~~rksq---k~~~k---~~e~v~~~q~el~~f~~~s~r~Al~EErRRYcFL~ekhc~ 195 (222)
T 3ok8_A 122 QHYEIEYRHRAANLEKCMSELWRMERKRD---KNARE---MKESVNRLHAQMQAFVSESKRAAELEEKRRYRFLAEKHLL 195 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC---TTHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhhhhc---cChHH---HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55543 1111 2222234444432221 11122 1222333344666666666655544444555666666667
Q ss_pred HHHHHHHHHhcCHHHHHHHhh
Q psy5190 251 FHNAISAYFSGNEPGLQATLK 271 (292)
Q Consensus 251 ~~nAl~ay~sgn~~~Le~tl~ 271 (292)
|.+.++.||..+...|.+-+.
T Consensus 196 ~~~~~~~~h~k~~~~L~~kl~ 216 (222)
T 3ok8_A 196 LSNTFLQFLGRARGMLQNRVL 216 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccch
Confidence 888899999999998887643
No 29
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=46.62 E-value=98 Score=28.46 Aligned_cols=28 Identities=7% Similarity=0.069 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHhhcChhhHHHHh
Q psy5190 105 VIFFLQQTLGEAFADLAQKSPELQEEFL 132 (292)
Q Consensus 105 ~l~qtq~~lgd~F~~Ls~kEpeL~~eF~ 132 (292)
.+++..+.+-++..+++.-.-.+...|.
T Consensus 39 kl~k~~~~~~~a~~~~~~a~~~f~~~L~ 66 (385)
T 2q13_A 39 QLYQAMHRIYDAQNELSAATHLTSKLLK 66 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444544444444433333333333
No 30
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=46.28 E-value=78 Score=32.05 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=25.2
Q ss_pred ccchHHHHHHHHHHHHHHHHhHHhHHHHHHhh
Q psy5190 204 NCSHLDEAQRNFQTHRENFEKLRNDVVVKLRF 235 (292)
Q Consensus 204 ~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdL 235 (292)
++.+++..|..+++.+.+-.||=.||.+||+-
T Consensus 129 QlsnIrvLQsnLedq~~kIQRLEvDIdiqirs 160 (562)
T 3ghg_A 129 KVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRS 160 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44556666778888888888999999988875
No 31
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=44.71 E-value=1.6e+02 Score=25.62 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=39.5
Q ss_pred hhHHHHhhchhhhhhhhHhhHHHHH-hHHHHHHhHHHhhhhhhhhHHHHHHHHHHhhHhH
Q psy5190 126 ELQEEFLCNSETQRNLTGTGEILLN-ALNLFVSSVNTLCNKTIEDTLVTVRQYENARVEY 184 (292)
Q Consensus 126 eL~~eF~~naetqr~m~k~G~~Ll~-aL~~f~sdl~Tf~~KAI~DTllTIkkYE~AR~EY 184 (292)
++-+.+..+-.+|-..-++|-.++. -+.+++.+|.+.+..+=.+.-.+.+.|+.-+-|.
T Consensus 195 e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~~~~~~~~~~~~l 254 (265)
T 2q12_A 195 ALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDL 254 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777777788888874 8888888888888766555444444444444333
No 32
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=43.50 E-value=1.6e+02 Score=27.22 Aligned_cols=19 Identities=11% Similarity=0.205 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHHHHHHHhH
Q psy5190 207 HLDEAQRNFQTHRENFEKL 225 (292)
Q Consensus 207 r~etaqr~~q~aK~rFdKL 225 (292)
+|+.++..+..+..||.++
T Consensus 155 ~Fek~~~~Yd~~l~Ky~~~ 173 (407)
T 4h8s_A 155 LFGLASNEHDLSMAKYSRL 173 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4555666666666666554
No 33
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=41.23 E-value=2e+02 Score=25.94 Aligned_cols=44 Identities=9% Similarity=0.095 Sum_probs=35.5
Q ss_pred cCchhhhHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHhhchhh
Q psy5190 94 TVDSDLKSRVLVIFFLQQTLGEAFADLAQKSPELQEEFLCNSET 137 (292)
Q Consensus 94 TvD~ELeakIl~l~qtq~~lgd~F~~Ls~kEpeL~~eF~~naet 137 (292)
+.-+||-.++..|+++.+.+-..|..+|..--..+++...-|..
T Consensus 16 ~~~pe~sr~L~~LIk~EK~vi~s~e~~are~~~~A~~Ls~WG~~ 59 (234)
T 3plt_A 16 NFGPELARKLSQLVKTEKGVLRAMEVVASERREAAKQLSLWGAD 59 (234)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45578888888999999999999999998888888777777654
No 34
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=36.44 E-value=1.3e+02 Score=26.55 Aligned_cols=86 Identities=10% Similarity=0.161 Sum_probs=45.2
Q ss_pred hhhhHhhHHHHHhHHHHHHhHHHhhhhhhhhHHHHHHHHHHhhHhHHHHHhhHHHhhccccCcccccchHHH-HHHHHHH
Q psy5190 139 RNLTGTGEILLNALNLFVSSVNTLCNKTIEDTLVTVRQYENARVEYDAYRTDLELLLQVTSNVDSNCSHLDE-AQRNFQT 217 (292)
Q Consensus 139 r~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~DTllTIkkYE~AR~EYdAyrl~leem~~e~~~~~~~l~r~et-aqr~~q~ 217 (292)
..|.+.-+.+..-|.|+..++.+-+++-+++-+..+.-|-.-= ....+..++++.....++. ..++. +...+++
T Consensus 84 ~~l~kd~ee~r~~l~Py~~el~~~~~~~~eelr~~L~P~~eel--~~~~~~~~eel~~~L~p~~---eelr~kl~~~vee 158 (243)
T 2a01_A 84 QEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAEL--QEGARQKLHELQEKLSPLG---EEMRDRARAHVDA 158 (243)
T ss_dssp HTSSCCSSCSSTTHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH--HHHHHHHHHHHCCSCCSST---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH--HHHHHhhHHHHHHHHHhHH---HHHHHHHHHHHHH
Confidence 3445555556666667777777666666666665554443210 1122456677765554422 33333 2446666
Q ss_pred HHHHHHhHHhHH
Q psy5190 218 HRENFEKLRNDV 229 (292)
Q Consensus 218 aK~rFdKLR~DV 229 (292)
-|+++.-+-.++
T Consensus 159 lk~~l~P~~ee~ 170 (243)
T 2a01_A 159 LRTHLAPYSDEL 170 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhhHHHH
Confidence 666664333333
No 35
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=33.44 E-value=1.5e+02 Score=24.78 Aligned_cols=46 Identities=17% Similarity=0.034 Sum_probs=25.6
Q ss_pred hHHHH-hhchhhhhhhhHhhHHHHHhHHHHHHhHHHhhhhhhhhHHH
Q psy5190 127 LQEEF-LCNSETQRNLTGTGEILLNALNLFVSSVNTLCNKTIEDTLV 172 (292)
Q Consensus 127 L~~eF-~~naetqr~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~DTll 172 (292)
|+.++ ....+....+.++...|...|.|+..++.+=+.+..++-+.
T Consensus 39 L~qqL~~~l~e~~~~l~~~~~~l~~~l~p~~~e~~~~l~~~~~~Lr~ 85 (185)
T 3r2p_A 39 LGKQLNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQ 85 (185)
T ss_dssp HHHHTTCCCCTTCSCSSCHHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 44555 23344455555666666666666666666555555544333
No 36
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=28.76 E-value=2.2e+02 Score=22.57 Aligned_cols=41 Identities=17% Similarity=0.440 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHhHH----HHHHhhhcccchhHHHHHHH
Q psy5190 207 HLDEAQRNFQTHRENFEKLRNDV----VVKLRFLDENRIKVMHKQLL 249 (292)
Q Consensus 207 r~etaqr~~q~aK~rFdKLR~DV----~vKLdLLdenRvkvm~~QL~ 249 (292)
|.++-...++.+...|..||.|| +.|++| +++|.-+..-|.
T Consensus 56 KyE~E~~~r~~~E~di~~lrK~lD~~~l~r~dL--E~~iesL~eEl~ 100 (119)
T 3ol1_A 56 KLQEEMLQREEAENTLQSFRQDVDNASLARLDL--ERKVESLQEEIA 100 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH--HHHHHHHHHHHH
Confidence 44555566778888899999988 567775 455655555544
No 37
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=27.75 E-value=2.8e+02 Score=23.57 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=13.8
Q ss_pred hhhhHhhHHHHHhHHHHHHhHHHhhhhhhhhHHHHH
Q psy5190 139 RNLTGTGEILLNALNLFVSSVNTLCNKTIEDTLVTV 174 (292)
Q Consensus 139 r~m~k~G~~Ll~aL~~f~sdl~Tf~~KAI~DTllTI 174 (292)
..+..+-..|...|.|+..++.+=+++.+++.+.-+
T Consensus 69 ~~l~~~~~~l~~qL~P~~~e~~~~l~~~~e~lr~~l 104 (191)
T 1nfn_A 69 KELKAYKSELEEQLTPVAEETRARLSKELQAAQARL 104 (191)
T ss_dssp HHHHHHHHHHTTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH
Confidence 334444455666666666666666665555555444
No 38
>4gwp_A Mediator of RNA polymerase II transcription subun; binding sites, mediator complex, models, molecular, phosphor protein structure; 4.20A {Saccharomyces cerevisiae} PDB: 4gwq_A
Probab=24.09 E-value=2.9e+02 Score=22.46 Aligned_cols=66 Identities=14% Similarity=0.217 Sum_probs=51.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHhhchh-hhhhhhHhhHHHHHhHHHHHHhHHHh
Q psy5190 97 SDLKSRVLVIFFLQQTLGEAFADLAQKSPELQEEFLCNSE-TQRNLTGTGEILLNALNLFVSSVNTL 162 (292)
Q Consensus 97 ~ELeakIl~l~qtq~~lgd~F~~Ls~kEpeL~~eF~~nae-tqr~m~k~G~~Ll~aL~~f~sdl~Tf 162 (292)
.+.|.+|..+++.--..-..|+++......+..+|..+.. .-..+++....|++-++.+=..++|.
T Consensus 14 ~~ID~kl~slL~~~S~~~~t~~elK~g~~~~K~qF~~~~~~fY~~Ls~~a~~LRkEIK~lDeNiG~~ 80 (115)
T 4gwp_A 14 NDIETQLCSMLQEASQVTFIFGELKRGNESVKPQFENHVKQFYERLDKSTTQLRKEIQLLDENVGTR 80 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Confidence 4567777666666666666777887777778889988874 47889999999999999888877764
No 39
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=22.28 E-value=3.6e+02 Score=22.89 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhHHhHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Q psy5190 212 QRNFQTHRENFEKLRNDVVVKLRFLDENRIKVMHKQLLLFHNAISAYFSGNEPGLQATLK 271 (292)
Q Consensus 212 qr~~q~aK~rFdKLR~DV~vKLdLLdenRvkvm~~QL~~~~nAl~ay~sgn~~~Le~tl~ 271 (292)
+....+-|.+..-.+.++..|+ +.++.-+..+|..|...+..-.....+.|...+.
T Consensus 105 ~kdlEelr~kL~P~~eEL~~~l----~~~~Eelr~~L~Py~eelr~kl~~~~eeLr~~l~ 160 (191)
T 1nfn_A 105 GADMEDVCGRLVQYRGEVQAML----GQSTEELRVRLASHLRKLRKRLLRDADDLQKRLA 160 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhH
Confidence 3455555555555555555554 4566777777777777666666666665555544
No 40
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=21.45 E-value=3.8e+02 Score=26.74 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=27.7
Q ss_pred ccchHHHHHHHHHHHHHHHHhHHhHHHHHHhhh
Q psy5190 204 NCSHLDEAQRNFQTHRENFEKLRNDVVVKLRFL 236 (292)
Q Consensus 204 ~l~r~etaqr~~q~aK~rFdKLR~DV~vKLdLL 236 (292)
++.+++..|..++..+.+-.||=.|+.+|++.=
T Consensus 130 qi~~IrvLq~~l~~q~skIQRLE~dI~~q~~~C 162 (491)
T 1m1j_A 130 QVNRIKALQNSIQEQVVEMKRLEVDIDIKIRAC 162 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345677778899999999999999999999873
No 41
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.62 E-value=44 Score=25.74 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=15.4
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhhhhhhcccch
Q psy5190 43 APMSFPTSPSGNSEGNPKSPVSKIESIKNWGIST 76 (292)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~k~~~~k~W~~~t 76 (292)
+|+++|.+|+.-.....+ ..--..+..|+...
T Consensus 3 ~~~~~~~tp~~~~~~~~~--~~~~~~v~~Ws~~~ 34 (103)
T 2e8o_A 3 SGSSGSNTPSAEADWSPG--LELHPDYKTWGPEQ 34 (103)
T ss_dssp CCCCCCCCCSCCCSCCSC--CCCCSCGGGCHHHH
T ss_pred CCCCCCCCccccccCCCc--cccccChhhCCHHH
Confidence 455555555433322221 22235677887753
Done!