Query psy5192
Match_columns 324
No_of_seqs 240 out of 1478
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 19:43:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5192.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5192hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 3.8E-48 1.3E-52 344.9 18.9 293 27-324 27-481 (510)
2 2ks9_A Substance-P receptor; w 100.0 1.3E-45 4.4E-50 315.8 17.8 290 24-324 24-316 (364)
3 3odu_A C-X-C chemokine recepto 100.0 1.2E-44 4.2E-49 322.6 16.1 287 26-324 42-487 (502)
4 2rh1_A Beta-2-adrenergic recep 100.0 1.3E-44 4.3E-49 321.9 12.5 283 27-324 35-471 (500)
5 3vw7_A Proteinase-activated re 100.0 6.4E-44 2.2E-48 316.5 16.0 290 26-324 14-459 (484)
6 1u19_A Rhodopsin; G protein-co 100.0 1.6E-43 5.5E-48 301.0 15.0 281 28-324 34-318 (349)
7 3uon_A Human M2 muscarinic ace 100.0 1.4E-43 4.9E-48 312.9 11.3 281 30-324 21-452 (467)
8 4dkl_A MU-type opioid receptor 100.0 2.6E-43 8.7E-48 311.0 11.9 285 28-324 13-450 (464)
9 2lnl_A C-X-C chemokine recepto 100.0 8E-43 2.7E-47 290.0 13.1 274 29-324 8-288 (296)
10 2z73_A Rhodopsin; visual pigme 100.0 1.9E-42 6.4E-47 304.1 15.3 295 18-324 20-326 (448)
11 4ea3_A Fusion protein of nocic 100.0 2.2E-41 7.4E-46 296.0 17.0 282 26-324 119-404 (434)
12 3eml_A Human adenosine A2A rec 100.0 7.2E-43 2.5E-47 310.1 7.2 286 30-324 19-461 (488)
13 4amj_A Beta-1 adrenergic recep 100.0 1E-42 3.6E-47 291.8 6.7 283 28-324 7-295 (315)
14 3rze_A Histamine H1 receptor, 100.0 1.8E-42 6.2E-47 304.6 8.1 281 30-324 6-437 (452)
15 3pbl_A D(3) dopamine receptor, 100.0 3.2E-42 1.1E-46 305.4 8.6 274 30-324 36-466 (481)
16 4eiy_A Adenosine receptor A2A/ 100.0 3.9E-43 1.3E-47 308.5 -0.4 289 27-324 26-420 (447)
17 3v2y_A Sphingosine 1-phosphate 100.0 3.3E-41 1.1E-45 301.1 10.8 277 29-324 60-487 (520)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 2.4E-40 8.2E-45 295.4 8.8 286 27-324 177-485 (514)
19 1hll_A Alpha-2A adrenergic rec 98.4 7.2E-08 2.5E-12 50.0 1.9 25 118-142 2-26 (32)
20 2koe_A Human cannabinoid recep 98.2 9.9E-08 3.4E-12 52.4 -0.8 29 296-324 4-32 (40)
21 2ki9_A Cannabinoid receptor 2; 97.8 2.5E-06 8.4E-11 44.3 -0.4 29 251-279 1-29 (33)
22 2lot_A Apelin receptor; membra 95.9 0.00014 4.7E-09 43.4 -4.1 29 34-62 30-58 (64)
23 2rdd_B UPF0092 membrane protei 23.2 20 0.00069 18.3 0.3 15 219-233 13-27 (37)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=3.8e-48 Score=344.93 Aligned_cols=293 Identities=22% Similarity=0.358 Sum_probs=228.9
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccc---cchhhHHHHHHHHHHHHHHHhhhhHHHHHHhh--ccCCCC
Q psy5192 27 VPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRM---QNVTNCFIANLALADIVIGLFAIPFQFQAALL--QRWNLP 101 (324)
Q Consensus 27 ~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~---~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~--~~~~~~ 101 (324)
.+....++..+++.+++++|++||+++++++.++|++ ++++|+|++|||++|++.+++.+|+.+..... +.|.++
T Consensus 27 ~~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g 106 (510)
T 4grv_A 27 TDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFG 106 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhh
Confidence 3445677888899999999999999999999887654 47889999999999999999999988877654 568999
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecC
Q psy5192 102 NFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTD 179 (324)
Q Consensus 102 ~~~C~~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 179 (324)
+..|++..++..++..+|++++++||+|||+||++|++|+. +++++..+++++|++++++++|+++.++.........
T Consensus 107 ~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~ 186 (510)
T 4grv_A 107 DAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGT 186 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCC
Confidence 99999999999999999999999999999999999998875 8889999999999999999999988776543322111
Q ss_pred CCCcccccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---------------------
Q psy5192 180 PAGRIHLKPFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGN--------------------- 238 (324)
Q Consensus 180 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~--------------------- 238 (324)
. .....|.. ..+......|..+..++.+++|+++++++|.+|+++++++.+...
T Consensus 187 ~----~~~~~c~~-~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (510)
T 4grv_A 187 H----PGGLVCTP-IVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYT 261 (510)
T ss_dssp C----GGGEEEEE-CSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEE
T ss_pred C----CCcccccc-ccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccc
Confidence 1 11223543 234455566777777888999999999999999999986432100
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 239 -------------------------------------------------------------------------------- 238 (324)
Q Consensus 239 -------------------------------------------------------------------------------- 238 (324)
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 341 (510)
T 4grv_A 262 IGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM 341 (510)
T ss_dssp EETTEECCCSSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccC
Confidence
Q ss_pred --------------------------------------------------CCccccHHHHhhhhhHHHHHHHHHHHHHHh
Q psy5192 239 --------------------------------------------------AQDSRDATLMKNKKKVIKMLVIVVALFAIC 268 (324)
Q Consensus 239 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 268 (324)
....+.++..++|+|++|++++++++|++|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iC 421 (510)
T 4grv_A 342 GETGVAGFTNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVC 421 (510)
T ss_dssp HHHHHTTCHHHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000011245789999999999999999
Q ss_pred hhhHHHHHHHhhhccCccc----hhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 269 WLPLQTYNVLQGIFPSINS----YHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 269 ~~P~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
|+|+++..++..+.+.... ......+..++.+|+++||++||+||+++|++|||+|
T Consensus 422 WlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aF 481 (510)
T 4grv_A 422 WLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVF 481 (510)
T ss_dssp HHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC-
T ss_pred HHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9999999888766543322 1233456677889999999999999999999999986
No 2
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=1.3e-45 Score=315.76 Aligned_cols=290 Identities=34% Similarity=0.603 Sum_probs=233.4
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCcc
Q psy5192 24 IYKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNF 103 (324)
Q Consensus 24 ~~~~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~ 103 (324)
....++....+..+++.+++++|++||+++++++.++|++|++.++++.|||++|++.+++..|........++|..++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~ 103 (364)
T 2ks9_A 24 QFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLF 103 (364)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHH
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHH
Confidence 34444555566688899999999999999999999999999999999999999999999988998887777788999999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCCCccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCc
Q psy5192 104 MCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARPSKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGR 183 (324)
Q Consensus 104 ~C~~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (324)
.|++..++..++..+|.+++++||+|||++|++|++++.++++.+..++++|+++++.++|...........
T Consensus 104 ~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~-------- 175 (364)
T 2ks9_A 104 YCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMP-------- 175 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCT--------
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHhHHHHHhhheecC--------
Confidence 999999999999999999999999999999999999988888888999999999999999876433221111
Q ss_pred ccccccccccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHhhhhhHHHHHHH
Q psy5192 184 IHLKPFCTNIHLSD---DTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDATLMKNKKKVIKMLVI 260 (324)
Q Consensus 184 ~~~~~~c~~~~~~~---~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (324)
....|...+... .....|......+.+++|+++++++|.++.+.+++++++.+..++ .+++.++++|++|+++.
T Consensus 176 --~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~-~~~~~~~~~k~~~~~~~ 252 (364)
T 2ks9_A 176 --SRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDR-YHEQVSAKRKVVKMMIV 252 (364)
T ss_dssp --TCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSC-SSHHHHHHHHHHHHHHH
T ss_pred --CCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchh-hhhhHHhhhhHHHHHHH
Confidence 112365433322 234567777778888999999999999999999887665443332 23445678999999999
Q ss_pred HHHHHHHhhhhHHHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 261 VVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 261 ~~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
+++.|++||+|+.+..++....++............+..++.++|+++||+||++++++||+++
T Consensus 253 v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~ 316 (364)
T 2ks9_A 253 VVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGF 316 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999988877664433222222334556677999999999999999999999864
No 3
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=1.2e-44 Score=322.56 Aligned_cols=287 Identities=22% Similarity=0.357 Sum_probs=232.5
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCcccc
Q psy5192 26 KVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMC 105 (324)
Q Consensus 26 ~~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C 105 (324)
+.......+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+ +.+|..+..... +|..+...|
T Consensus 42 ~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C 119 (502)
T 3odu_A 42 ENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLC 119 (502)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhh
Confidence 344667888999999999999999999999999999999999999999999999994 678877765544 788999999
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCc
Q psy5192 106 PFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGR 183 (324)
Q Consensus 106 ~~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (324)
++..++..++..+|.+++++||+|||++|++|++|+. +++++..+++++|+++++.++|.++.........
T Consensus 120 ~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~------- 192 (502)
T 3odu_A 120 KAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADD------- 192 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSS-------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCC-------
Confidence 9999999999999999999999999999999998875 7778889999999999999999887654432211
Q ss_pred ccccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-----------------------
Q psy5192 184 IHLKPFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQ----------------------- 240 (324)
Q Consensus 184 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~----------------------- 240 (324)
...|...+.+......|.....++.+++|+++++++|.+|++.+++++++.+..
T Consensus 193 ---~~~C~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (502)
T 3odu_A 193 ---RYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGI 269 (502)
T ss_dssp ---SEEEEECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEET
T ss_pred ---ceEEeecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCcccccccc
Confidence 123766566666667777778888899999999999999999999876551100
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 241 -------------------------------------------------------------------------------- 240 (324)
Q Consensus 241 -------------------------------------------------------------------------------- 240 (324)
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (502)
T 3odu_A 270 GHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGET 349 (502)
T ss_dssp TEEEECSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCccccccchhhhcccCcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchh
Confidence
Q ss_pred ------------------------------------------------ccccHHHHhhhhhHHHHHHHHHHHHHHhhhhH
Q psy5192 241 ------------------------------------------------DSRDATLMKNKKKVIKMLVIVVALFAICWLPL 272 (324)
Q Consensus 241 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~ 272 (324)
.++.+.+.++++|++|++++++++|++||+|+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~ 429 (502)
T 3odu_A 350 GVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPY 429 (502)
T ss_dssp HHHTCHHHHHHHHHTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCccccchhhhchhhhhccccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhH
Confidence 00000123457899999999999999999999
Q ss_pred HHHHHHhhhc------cCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 273 QTYNVLQGIF------PSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 273 ~i~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
.+..++..+. ...........+..+..++.++|+++||+||++++++||+++
T Consensus 430 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 487 (502)
T 3odu_A 430 YIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSA 487 (502)
T ss_dssp HHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCH
T ss_pred HHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHH
Confidence 9987776543 112223444555677889999999999999999999999974
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1.3e-44 Score=321.87 Aligned_cols=283 Identities=29% Similarity=0.465 Sum_probs=221.0
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCccccc
Q psy5192 27 VPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCP 106 (324)
Q Consensus 27 ~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~ 106 (324)
..+....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.....+.|.++...|+
T Consensus 35 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~ 114 (500)
T 2rh1_A 35 RDEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCE 114 (500)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhh
Confidence 34556677889999999999999999999999999999999999999999999999999999888888889999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhh-hhheeeceeeeeeecCCCCc
Q psy5192 107 FCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAA-PMAIATGVTMEEEYTDPAGR 183 (324)
Q Consensus 107 ~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 183 (324)
+..++..++..+|++++++||+|||++|++|++|+. +++++..+++++|+++++.++ |....+.......
T Consensus 115 ~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~------- 187 (500)
T 2rh1_A 115 FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQE------- 187 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccC-------
Confidence 999999999999999999999999999999998875 788888999999999999985 4433332211100
Q ss_pred ccccccccccC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---------------CCCCc-----
Q psy5192 184 IHLKPFCTNIH--LSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAP---------------GNAQD----- 241 (324)
Q Consensus 184 ~~~~~~c~~~~--~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~---------------~~~~~----- 241 (324)
...|.... .+......|.....++.+++|+++++++|.+|++.++++.++ .+...
T Consensus 188 ---~~~c~~~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (500)
T 2rh1_A 188 ---AINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIG 264 (500)
T ss_dssp ---HHHHHHCTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEE
T ss_pred ---cceecccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCC
Confidence 00121111 011122456667777888999999999999999999876544 00000
Q ss_pred ----------------------------------------c---------------------------------------
Q psy5192 242 ----------------------------------------S--------------------------------------- 242 (324)
Q Consensus 242 ----------------------------------------~--------------------------------------- 242 (324)
+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (500)
T 2rh1_A 265 IGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGE 344 (500)
T ss_dssp TTEEEESCSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccccccccccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCc
Confidence 0
Q ss_pred --------------------------------------------------ccHHHHhhhhhHHHHHHHHHHHHHHhhhhH
Q psy5192 243 --------------------------------------------------RDATLMKNKKKVIKMLVIVVALFAICWLPL 272 (324)
Q Consensus 243 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~ 272 (324)
+..+..++|+|++|++++++++|++||+|+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~ 424 (500)
T 2rh1_A 345 TGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPF 424 (500)
T ss_dssp HHHHTCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCchhhhhcccccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001267899999999999999999999
Q ss_pred HHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 273 QTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 273 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
.+..++..+..... ...+..+..++.++||++||+||++ |++||++|
T Consensus 425 ~i~~l~~~~~~~~~----~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af 471 (500)
T 2rh1_A 425 FIVNIVHVIQDNLI----RKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAF 471 (500)
T ss_dssp HHHHHHHHHSTTSS----CHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHH
T ss_pred HHHHHHHHHcCCcc----cHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHH
Confidence 99988877653221 2345566778999999999999985 99999974
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.4e-44 Score=316.54 Aligned_cols=290 Identities=16% Similarity=0.294 Sum_probs=224.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhh-ccCCCCccc
Q psy5192 26 KVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALL-QRWNLPNFM 104 (324)
Q Consensus 26 ~~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~-~~~~~~~~~ 104 (324)
..++....+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++.++. .|........ +.|..+...
T Consensus 14 ~~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~ 92 (484)
T 3vw7_A 14 LTSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSEL 92 (484)
T ss_dssp HTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHH
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhH
Confidence 34567778889999999999999999999999999999999999999999999999665 5544444444 589999999
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCC
Q psy5192 105 CPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAG 182 (324)
Q Consensus 105 C~~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (324)
|++..++..++..+|.+++++||+|||++|++|++|+. +++++..+++++|+++++.++|+++...........
T Consensus 93 C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~---- 168 (484)
T 3vw7_A 93 CRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLG---- 168 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTT----
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCC----
Confidence 99999999999999999999999999999999999865 788889999999999999999998876544322110
Q ss_pred cccccccccccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----------------C---
Q psy5192 183 RIHLKPFCTNIHLSD---DTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNA----------------Q--- 240 (324)
Q Consensus 183 ~~~~~~~c~~~~~~~---~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~----------------~--- 240 (324)
...|....... .....|.....++.+++|+++++++|.+|++.+++++++.+. .
T Consensus 169 ----~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 244 (484)
T 3vw7_A 169 ----ITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYT 244 (484)
T ss_dssp ----EEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEE
T ss_pred ----CceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhcccccccee
Confidence 12365544332 334446667778889999999999999999999988741000 0
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 241 -------------------------------------------------------------------------------- 240 (324)
Q Consensus 241 -------------------------------------------------------------------------------- 240 (324)
T Consensus 245 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 324 (484)
T 3vw7_A 245 IGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM 324 (484)
T ss_dssp EETTEEEESSSCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHH
T ss_pred eeccccccCCcchhcccccccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhcccccc
Confidence
Q ss_pred --------------------------------------------------ccccHHHHhhhhhHHHHHHHHHHHHHHhhh
Q psy5192 241 --------------------------------------------------DSRDATLMKNKKKVIKMLVIVVALFAICWL 270 (324)
Q Consensus 241 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 270 (324)
+.+...+.++++|++|++++++++|++||+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwl 404 (484)
T 3vw7_A 325 GETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFG 404 (484)
T ss_dssp HHHHHHTTHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred CccccccchhhhhhhhccchhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhh
Confidence 000001335568999999999999999999
Q ss_pred hHHHHHHHhhhcc-CccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 271 PLQTYNVLQGIFP-SINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 271 P~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
|+.+..++..+.. .............+..++.++|+++||+||+++|++||+++
T Consensus 405 P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~ 459 (484)
T 3vw7_A 405 PTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYV 459 (484)
T ss_dssp HHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC----
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHH
Confidence 9999988875432 22333444566678889999999999999999999999985
No 6
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.6e-43 Score=301.02 Aligned_cols=281 Identities=21% Similarity=0.318 Sum_probs=229.2
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCcccccc
Q psy5192 28 PTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPF 107 (324)
Q Consensus 28 ~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 107 (324)
++....+..+++.+++++|++||+++++++.++|++|++.++++.|||++|++.++...|........+.|..++..|++
T Consensus 34 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 113 (349)
T 1u19_A 34 EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNL 113 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHH
Confidence 45567788889999999999999999999999999999999999999999999999999988887777889999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC-CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCcccc
Q psy5192 108 CPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP-SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHL 186 (324)
Q Consensus 108 ~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~-~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (324)
..++..++..+|.+++++||+|||++|++|++++. +++++...++++|+++++.++|+..++.....+..
T Consensus 114 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~--------- 184 (349)
T 1u19_A 114 EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGM--------- 184 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETT---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCccceeeccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCC---------
Confidence 99999999999999999999999999999998875 77888888999999999999998876543322211
Q ss_pred cccccccCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHhhhhhHHHHHHHHHH
Q psy5192 187 KPFCTNIHLS---DDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDATLMKNKKKVIKMLVIVVA 263 (324)
Q Consensus 187 ~~~c~~~~~~---~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (324)
...|...+.. ......|......+.+++|+++++++|.++.+++++++++.+.+ ++++++++|.++++..+++
T Consensus 185 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~ 260 (349)
T 1u19_A 185 QCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES----ATTQKAEKEVTRMVIIMVI 260 (349)
T ss_dssp TTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCSS----SHHHHHHHHHHHHHHHHHH
T ss_pred ceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc----hhhHHHHHHHHHHHHHHHH
Confidence 1125443322 22445666677778889999999999999999998876643322 2334667899999999999
Q ss_pred HHHHhhhhHHHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 264 LFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 264 ~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
.|++||+|+.+..++.......... .....+..++..+|+++||+||++++++||+++
T Consensus 261 ~f~i~~~P~~i~~~~~~~~~~~~~~---~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~ 318 (349)
T 1u19_A 261 AFLICWLPYAGVAFYIFTHQGSDFG---PIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM 318 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCC---HHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhHhheecCCcccc---hHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 9999999999887776554332221 234456678999999999999999999999863
No 7
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1.4e-43 Score=312.93 Aligned_cols=281 Identities=21% Similarity=0.340 Sum_probs=228.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCccccccch
Q psy5192 30 SIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPFCP 109 (324)
Q Consensus 30 ~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 109 (324)
....+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++.+++.+|..+.....+.|..++..|++..
T Consensus 21 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 100 (467)
T 3uon_A 21 FEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWL 100 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHH
Confidence 34566888899999999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCccccc
Q psy5192 110 FVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLK 187 (324)
Q Consensus 110 ~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (324)
++..++..+|.+++++||+|||++|++|++|+. +++++..+++++|+++++.++|+++.+.......... .
T Consensus 101 ~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~-------~ 173 (467)
T 3uon_A 101 ALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVE-------D 173 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC-------S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC-------C
Confidence 999999999999999999999999999998875 8888889999999999999999887654332211111 1
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc--------------------------
Q psy5192 188 PFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQD-------------------------- 241 (324)
Q Consensus 188 ~~c~~~~~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~-------------------------- 241 (324)
..|...... ...|.....++.+++|+++++++|.+|++.++++.++.+...
T Consensus 174 ~~C~~~~~~---~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (467)
T 3uon_A 174 GECYIQFFS---NAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLT 250 (467)
T ss_dssp SCCCCGGGG---SHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECC
T ss_pred CcceeecCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccc
Confidence 236543332 234666777888899999999999999999998764211000
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 242 -------------------------------------------------------------------------------- 241 (324)
Q Consensus 242 -------------------------------------------------------------------------------- 241 (324)
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (467)
T 3uon_A 251 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGF 330 (467)
T ss_dssp CCSSHHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cCCcccccccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCcc
Confidence
Q ss_pred -------------------------------------------cccHHHHhhhhhHHHHHHHHHHHHHHhhhhHHHHHHH
Q psy5192 242 -------------------------------------------SRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVL 278 (324)
Q Consensus 242 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~ 278 (324)
.+..+..++|+|++|++++++++|++||+|+.+..++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~ 410 (467)
T 3uon_A 331 TNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLI 410 (467)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 0000001357899999999999999999999999888
Q ss_pred hhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 279 QGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
..+...... .....+..++.++|+++||+||++++++||+++
T Consensus 411 ~~~~~~~~~----~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~ 452 (467)
T 3uon_A 411 NTFCAPCIP----NTVWTIGYWLCYINSTINPACYALCNATFKKTF 452 (467)
T ss_dssp HHHCSTTSC----HHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHH
T ss_pred HHHHhcccc----hHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHH
Confidence 776543222 345567778999999999999999999999874
No 8
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=2.6e-43 Score=311.03 Aligned_cols=285 Identities=25% Similarity=0.459 Sum_probs=229.6
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCcccccc
Q psy5192 28 PTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPF 107 (324)
Q Consensus 28 ~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 107 (324)
+.....+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++.++. +|..+.....+.|..+...|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~ 91 (464)
T 4dkl_A 13 SMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKI 91 (464)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhh
Confidence 345577788999999999999999999999999999999999999999999999776 8888888888899999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCccc
Q psy5192 108 CPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIH 185 (324)
Q Consensus 108 ~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (324)
..++..++..+|.+++++||+|||++|++|++|+. +++++..+++++|++++++++|.++.........
T Consensus 92 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~--------- 162 (464)
T 4dkl_A 92 VISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQG--------- 162 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETT---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCC---------
Confidence 99999999999999999999999999999998864 7888899999999999999999887544332211
Q ss_pred ccccccccCCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc----------------------
Q psy5192 186 LKPFCTNIHLSDD--TMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQD---------------------- 241 (324)
Q Consensus 186 ~~~~c~~~~~~~~--~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~---------------------- 241 (324)
...|........ ....|.....++.+++|+++++++|.+|++.++++++..+...
T Consensus 163 -~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (464)
T 4dkl_A 163 -SIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIG 241 (464)
T ss_dssp -EEECCBCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETT
T ss_pred -CceEEeecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCcccccc
Confidence 122554333333 2455667777888899999999999999999988765110000
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 242 -------------------------------------------------------------------------------- 241 (324)
Q Consensus 242 -------------------------------------------------------------------------------- 241 (324)
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (464)
T 4dkl_A 242 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 321 (464)
T ss_dssp EEEESSSCSHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHH
T ss_pred ccccCCCccccccccccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCC
Confidence
Q ss_pred -----------------------------------------------cccHHHHhhhhhHHHHHHHHHHHHHHhhhhHHH
Q psy5192 242 -----------------------------------------------SRDATLMKNKKKVIKMLVIVVALFAICWLPLQT 274 (324)
Q Consensus 242 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i 274 (324)
.+..++.++|+|++|++++++++|++||+|+.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i 401 (464)
T 4dkl_A 322 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHI 401 (464)
T ss_dssp HHTCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhcccchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 000011245689999999999999999999999
Q ss_pred HHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 275 YNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
..++..+.... ..........+..++.++|+++||+||+++|++||+++
T Consensus 402 ~~l~~~~~~~~-~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 450 (464)
T 4dkl_A 402 YVIIKALITIP-ETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCF 450 (464)
T ss_dssp HHHHHHHSCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHhcCC-ccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHH
Confidence 98887664432 33344455667788999999999999999999999874
No 9
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=8e-43 Score=290.03 Aligned_cols=274 Identities=22% Similarity=0.397 Sum_probs=213.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCccccccc
Q psy5192 29 TSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPFC 108 (324)
Q Consensus 29 ~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 108 (324)
+..+.+..+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++ ..|...... .++|..++..|+..
T Consensus 8 ~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~-~~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 8 TLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVV 85 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHH-HSSSCCSSHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhc-cCCCccchhHHHHH
Confidence 3445667788999999999999999999999999999999999999999999865 456555443 35789999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC-CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCccccc
Q psy5192 109 PFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP-SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLK 187 (324)
Q Consensus 109 ~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~-~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (324)
.++...+..+|.+++++||+|||++|++|++++. .+++...+++++|+.+++.++|+.........+......
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~------ 159 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVC------ 159 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCC------
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhhhhhHheehHHHHHHHHHhcchhhcceeecCCCCCcee------
Confidence 9999999999999999999999999999998876 445566677889999999999988766544332211110
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHhhhhhHHHHHHHHHHHHHH
Q psy5192 188 PFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDATLMKNKKKVIKMLVIVVALFAI 267 (324)
Q Consensus 188 ~~c~~~~~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 267 (324)
.+............+........+++|+.++..+|.++.++++++++ ++++|.+|++..+++.|++
T Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~-------------~~~~k~~~~~~~v~~~f~i 225 (296)
T 2lnl_A 160 -YEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM-------------GQKHRAMRVIFAVVLIFLL 225 (296)
T ss_dssp -CSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCC-------------HHHHTHHHHHHHHHHHHHH
T ss_pred -eeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------hhhhhHHHHHHHhhhheee
Confidence 01111223333445666667788899999999999988766554332 3477899999999999999
Q ss_pred hhhhHHHHHHHhhhccCccc------hhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 268 CWLPLQTYNVLQGIFPSINS------YHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 268 ~~~P~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
||+|+.+..+.......... .........++.+++++||++||+||+++|+||||++
T Consensus 226 cw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~ 288 (296)
T 2lnl_A 226 CWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGF 288 (296)
T ss_dssp HHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHH
T ss_pred eehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 99999998888766443211 1222345567788999999999999999999999974
No 10
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=1.9e-42 Score=304.12 Aligned_cols=295 Identities=21% Similarity=0.329 Sum_probs=231.7
Q ss_pred eeeeeeccccchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhh-hhHHHHHHhhc
Q psy5192 18 TEKYLGIYKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFA-IPFQFQAALLQ 96 (324)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~-~~~~~~~~~~~ 96 (324)
.+++.+..+.+........+++.+++++|++||+++++++.++|++|++.+++++|||++|++.+++. +|..+.....+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~ 99 (448)
T 2z73_A 20 HPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLK 99 (448)
T ss_dssp CHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTT
T ss_pred CchhhhcCCCCchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcC
Confidence 33444445556667788889999999999999999999999999999999999999999999998764 78877777778
Q ss_pred cCCCCccccccchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeee
Q psy5192 97 RWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTME 174 (324)
Q Consensus 97 ~~~~~~~~C~~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 174 (324)
+|..++..|++..++..++..+|++++++||+|||++|++|++++. +++++..+++++|+++++++++.++.+.....
T Consensus 100 ~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~ 179 (448)
T 2z73_A 100 KWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTL 179 (448)
T ss_dssp SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEE
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeee
Confidence 8889999999999999999999999999999999999999998764 78888999999999999999988876554332
Q ss_pred eeecCCCCcccccccccccCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--------CCCCccccH
Q psy5192 175 EEYTDPAGRIHLKPFCTNIHLS-DDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAP--------GNAQDSRDA 245 (324)
Q Consensus 175 ~~~~~~~~~~~~~~~c~~~~~~-~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~--------~~~~~~~~~ 245 (324)
+.. ...|...... +.....+.....++.+++|+++++++|.+|++.++|++++ .....++..
T Consensus 180 ~~~---------~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~ 250 (448)
T 2z73_A 180 EGV---------LCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQ 250 (448)
T ss_dssp CTT---------SSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHH
T ss_pred cCC---------ceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhh
Confidence 211 1225443332 3344556666677778999999999999999888765322 111112222
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 246 TLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
+..++++|.+|++++++++|++||+|+.+..++......... ......+..++..+|+++||+||+++|++||+++
T Consensus 251 ~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~~~---~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~ 326 (448)
T 2z73_A 251 AGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWV---TPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAI 326 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGC---CHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcccC---ChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHH
Confidence 334568899999999999999999999998887665432111 1234455667899999999999999999999863
No 11
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=296.04 Aligned_cols=282 Identities=28% Similarity=0.475 Sum_probs=225.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCcccc
Q psy5192 26 KVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMC 105 (324)
Q Consensus 26 ~~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C 105 (324)
..+...+.+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++. ++..|........+.|..+...|
T Consensus 119 ~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C 197 (434)
T 4ea3_A 119 FLPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALC 197 (434)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHH
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHH
Confidence 34566788888999999999999999999999999999999999999999999998 67788888888888899999999
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCc
Q psy5192 106 PFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGR 183 (324)
Q Consensus 106 ~~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (324)
++..++..++..+|.+++++||+|||++|++|++|+. +++++..+++++|+++++.++|..+.........
T Consensus 198 ~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~------- 270 (434)
T 4ea3_A 198 KTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDE------- 270 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSS-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecC-------
Confidence 9999999999999999999999999999999998875 7888888999999999999998776443222111
Q ss_pred ccccccccccCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHhhhhhHHHHHHHH
Q psy5192 184 IHLKPFCTNIHLSD--DTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDATLMKNKKKVIKMLVIV 261 (324)
Q Consensus 184 ~~~~~~c~~~~~~~--~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (324)
...|....... .....|......+.+++|+++++++|.+|++++++++++. +.+++.++++|.+++++.+
T Consensus 271 ---~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~v 342 (434)
T 4ea3_A 271 ---EIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLS-----GSREKDRNLRRITRLVLVV 342 (434)
T ss_dssp ---CCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCS-----SCHHHHHHHHHHHHHHHHH
T ss_pred ---ceeEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----cchhhHHHHhHHHHHHHHH
Confidence 11254433322 2345566777788899999999999999999998776543 2233446688999999999
Q ss_pred HHHHHHhhhhHHHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 262 VALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 262 ~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
+++|++||+|+.+..++....... ..........+..++.++|+++||+||++++++||+++
T Consensus 343 v~~F~i~w~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~ 404 (434)
T 4ea3_A 343 VAVFVGCWTPVQVFVLAQGLGVQP-SSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACF 404 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988876554332 23333445566777899999999999999999999863
No 12
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=7.2e-43 Score=310.06 Aligned_cols=286 Identities=27% Similarity=0.325 Sum_probs=222.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCccccccch
Q psy5192 30 SIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPFCP 109 (324)
Q Consensus 30 ~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 109 (324)
....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.. ...|..+...|++..
T Consensus 19 ~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~--~~~~~~~~~~C~~~~ 96 (488)
T 3eml_A 19 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI--STGFCAACHGCLFIA 96 (488)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHH--TTCCEECHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHH--hccccccchHHHHHH
Confidence 344567788999999999999999999999999999999999999999999999999977753 336777888999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCccccc
Q psy5192 110 FVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLK 187 (324)
Q Consensus 110 ~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (324)
++..++..+|++++++||+|||++|++|++|+. +++++..+++++|++++++++|+++.+............ .
T Consensus 97 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~-----~ 171 (488)
T 3eml_A 97 CFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNH-----S 171 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC------------C
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc-----c
Confidence 999999999999999999999999999998765 888889999999999999999988766543322111110 1
Q ss_pred ccccccCC-----CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc---------------------
Q psy5192 188 PFCTNIHL-----SDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQD--------------------- 241 (324)
Q Consensus 188 ~~c~~~~~-----~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~--------------------- 241 (324)
..|..... +......+.....++.+++|+++++++|.+|++.+++++++.+..+
T Consensus 172 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (488)
T 3eml_A 172 QGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGI 251 (488)
T ss_dssp CSSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEET
T ss_pred cccccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccc
Confidence 22433221 1122233444556788899999999999999999998765421000
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 242 -------------------------------------------------------------------------------- 241 (324)
Q Consensus 242 -------------------------------------------------------------------------------- 241 (324)
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (488)
T 3eml_A 252 GHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGET 331 (488)
T ss_dssp TEEEESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHH
T ss_pred cccCCCCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCC
Confidence
Q ss_pred -------------------------------------------------cccHHHHhhhhhHHHHHHHHHHHHHHhhhhH
Q psy5192 242 -------------------------------------------------SRDATLMKNKKKVIKMLVIVVALFAICWLPL 272 (324)
Q Consensus 242 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~ 272 (324)
.+.++..++++|++|++++++++|++||+|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~ 411 (488)
T 3eml_A 332 GVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPL 411 (488)
T ss_dssp HHTTCHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 0111224578999999999999999999999
Q ss_pred HHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 273 QTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 273 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
.+..++..+.+... ........+..++.++|+++||+||++++++||+++
T Consensus 412 ~i~~~~~~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~ 461 (488)
T 3eml_A 412 HIINCFTFFCPDCS--HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTF 461 (488)
T ss_dssp HHHHHHHHHCTTSC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHhccCccc--cccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHH
Confidence 99988877754332 222345567778999999999999999999999864
No 13
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=1e-42 Score=291.75 Aligned_cols=283 Identities=27% Similarity=0.444 Sum_probs=223.2
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCcccccc
Q psy5192 28 PTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPF 107 (324)
Q Consensus 28 ~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 107 (324)
++.......+++.+++++|++||+++++++.++|++|++.++++.|||++|++.++...|........++|..++..|++
T Consensus 7 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 86 (315)
T 4amj_A 7 SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCEL 86 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHH
Confidence 45567778899999999999999999999999999999999999999999999988899998888888899999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCccc
Q psy5192 108 CPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIH 185 (324)
Q Consensus 108 ~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (324)
..++..++..+|.+++++||+|||++|++|++|+. +++++...++++|+++++.+.++..........+..
T Consensus 87 ~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~------- 159 (315)
T 4amj_A 87 WTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQA------- 159 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCc-------
Confidence 99999999999999999999999999999998874 888889999999999999998776543322211110
Q ss_pred ccccccccC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc--cccHHHHhhhhhHHHHHHHH
Q psy5192 186 LKPFCTNIH--LSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQD--SRDATLMKNKKKVIKMLVIV 261 (324)
Q Consensus 186 ~~~~c~~~~--~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 261 (324)
..|.... .+......|......+.+++|+++++++|.++.+.++++.++.+..+ +++++..++++|.++++..+
T Consensus 160 --~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 237 (315)
T 4amj_A 160 --LKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGII 237 (315)
T ss_dssp --HHHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHH
T ss_pred --cccccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHH
Confidence 1121111 12223345566667777889999999999999999998766544322 22334445789999999999
Q ss_pred HHHHHHhhhhHHHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 262 VALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 262 ~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
+++|++||+|+.+..++.....+... .....+..++.++|+++||++|+ ++++||+++
T Consensus 238 ~~~f~i~~~P~~i~~~~~~~~~~~~~----~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~ 295 (315)
T 4amj_A 238 MGVFTLCWLPFFLVNIVNVFNRDLVP----DWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAF 295 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSSC----HHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccch----HHHHHHHHHHHHHhccccHHHHc-CcHHHHHHH
Confidence 99999999999999888766543322 23445666789999999999999 999999863
No 14
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=304.62 Aligned_cols=281 Identities=22% Similarity=0.414 Sum_probs=221.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCccccccch
Q psy5192 30 SIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPFCP 109 (324)
Q Consensus 30 ~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 109 (324)
....+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++.+++.+|..+.....+.|..+...|++..
T Consensus 6 ~~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 85 (452)
T 3rze_A 6 PQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWL 85 (452)
T ss_dssp ---CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHH
Confidence 34445678899999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCccccc
Q psy5192 110 FVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLK 187 (324)
Q Consensus 110 ~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (324)
++..++..+|.+++++||+|||++|++|++|+. +++++..+++++|+++++.++|.+............ ..
T Consensus 86 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~-------~~ 158 (452)
T 3rze_A 86 SMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVR-------RE 158 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------C-------CS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccC-------CC
Confidence 999999999999999999999999999998865 888889999999999999988865433222111100 12
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc--------------------------
Q psy5192 188 PFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQD-------------------------- 241 (324)
Q Consensus 188 ~~c~~~~~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~-------------------------- 241 (324)
..|....... ..|.....++.+++|+++++++|.+|++.+++++++.+...
T Consensus 159 ~~C~~~~~~~---~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (452)
T 3rze_A 159 DKCETDFYDV---TWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLT 235 (452)
T ss_dssp SSSCCSCTTC---HHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECS
T ss_pred CeecCCCccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccc
Confidence 2365433332 33566677888899999999999999999988754310000
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 242 -------------------------------------------------------------------------------- 241 (324)
Q Consensus 242 -------------------------------------------------------------------------------- 241 (324)
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (452)
T 3rze_A 236 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGF 315 (452)
T ss_dssp SCSSHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSC
T ss_pred cCCCCCcccccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCcc
Confidence
Q ss_pred -------------------------------------------cccHHHHhhhhhHHHHHHHHHHHHHHhhhhHHHHHHH
Q psy5192 242 -------------------------------------------SRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVL 278 (324)
Q Consensus 242 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~ 278 (324)
.+..++.++|+|+++++++++++|++||+|+.+..++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~ 395 (452)
T 3rze_A 316 TNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMV 395 (452)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchhhhcCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 0000012367899999999999999999999999888
Q ss_pred hhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 279 QGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
....+..... ....+..++.++|+++||+||++++++||+++
T Consensus 396 ~~~~~~~~~~----~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 437 (452)
T 3rze_A 396 IAFCKNCCNE----HLHMFTIWLGYINSTLNPLIYPLCNENFKKTF 437 (452)
T ss_dssp HHHHSCCSCT----TTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHhcccccH----HHHHHHHHHHHHHhcccchhhhhccHHHHHHH
Confidence 7765443322 23346778999999999999999999999874
No 15
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=305.42 Aligned_cols=274 Identities=25% Similarity=0.419 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhh-ccCCCCccccccc
Q psy5192 30 SIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALL-QRWNLPNFMCPFC 108 (324)
Q Consensus 30 ~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~-~~~~~~~~~C~~~ 108 (324)
....+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++.+++.+|..+..... +.|..+...|++.
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 345667788999999999999999999999999999999999999999999999999988876665 6788999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHhhccCCc---C--CCccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCc
Q psy5192 109 PFVQCLTVTVSVLTLTAIAVDRHRAILNPLSA---R--PSKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGR 183 (324)
Q Consensus 109 ~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~---~--~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (324)
.++..++..++.+++++||+|||++|++|++| . .+.+++..+++++|++++++++|+++.+.....
T Consensus 116 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~--------- 186 (481)
T 3pbl_A 116 VTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGD--------- 186 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSS---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccCC---------
Confidence 99999999999999999999999999999987 2 266788889999999999999998875543211
Q ss_pred ccccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccc--------------------
Q psy5192 184 IHLKPFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQDSR-------------------- 243 (324)
Q Consensus 184 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~~~~-------------------- 243 (324)
...|.... ..|.....++.+++|+++++++|.+|++.+++++++......+
T Consensus 187 ---~~~C~~~~------~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (481)
T 3pbl_A 187 ---PTVCSISN------PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIG 257 (481)
T ss_dssp ---TTCCSCCC------HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEET
T ss_pred ---CCcccccC------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeec
Confidence 12364321 2255566778889999999999999999999887652100000
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 244 -------------------------------------------------------------------------------- 243 (324)
Q Consensus 244 -------------------------------------------------------------------------------- 243 (324)
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (481)
T 3pbl_A 258 IGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGE 337 (481)
T ss_dssp TTEEEESSSCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred ccccccCCcccccCCCcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCC
Confidence
Q ss_pred ---------------------------------cH------------------HHHhhhhhHHHHHHHHHHHHHHhhhhH
Q psy5192 244 ---------------------------------DA------------------TLMKNKKKVIKMLVIVVALFAICWLPL 272 (324)
Q Consensus 244 ---------------------------------~~------------------~~~~~~~~~~~~~~~~~~~f~~~~~P~ 272 (324)
.. +..++++|++|++++++++|++||+|+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~ 417 (481)
T 3pbl_A 338 TGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPF 417 (481)
T ss_dssp HHHTTCHHHHHHHHTTCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccchhccccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHH
Confidence 00 001248999999999999999999999
Q ss_pred HHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 273 QTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 273 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
.+..++......... ...+..+..++.++|+++||+||++++++||+++
T Consensus 418 ~i~~~~~~~~~~~~~---~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 466 (481)
T 3pbl_A 418 FLTHVLNTHCQTCHV---SPELYSATTWLGYVNSALNPVIYTTFNIEFRKAF 466 (481)
T ss_dssp HHHHHHHHSCSSCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHhccccccC---cHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHH
Confidence 999888766443222 2335566778999999999999999999999874
No 16
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=3.9e-43 Score=308.46 Aligned_cols=289 Identities=28% Similarity=0.336 Sum_probs=220.3
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCccccc
Q psy5192 27 VPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCP 106 (324)
Q Consensus 27 ~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~ 106 (324)
.+.....+..+++.+++++|++||+++++++.+++++|++.++++.|||++|++.+++.+|..+.. ...|..+...|+
T Consensus 26 ~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~--~~~~~~~~~~C~ 103 (447)
T 4eiy_A 26 PPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI--STGFCAACHGCL 103 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHH--HTTCEEEHHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccccCccHHH
Confidence 455666778889999999999999999999999999999999999999999999999899977753 345667888999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCcc
Q psy5192 107 FCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRI 184 (324)
Q Consensus 107 ~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (324)
+..++..++..+|.+++++||+|||++|++|++|+. +++++..+++++|+++++.++|+.+++..........
T Consensus 104 ~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~----- 178 (447)
T 4eiy_A 104 FIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGK----- 178 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHH-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccc-----
Confidence 999999999999999999999999999999998764 8888999999999999999999887655332211000
Q ss_pred cccccccccCC-----CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-------------------
Q psy5192 185 HLKPFCTNIHL-----SDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQ------------------- 240 (324)
Q Consensus 185 ~~~~~c~~~~~-----~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~~~------------------- 240 (324)
.....|..... +......+.....++.+++|+++++++|.+|++.++++.++.+..
T Consensus 179 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (447)
T 4eiy_A 179 NHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQ 258 (447)
T ss_dssp HHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHH
T ss_pred cccccccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchh
Confidence 00112332111 111122233333455678999999999999999998753211000
Q ss_pred --------------------------------------------------------------------------------
Q psy5192 241 -------------------------------------------------------------------------------- 240 (324)
Q Consensus 241 -------------------------------------------------------------------------------- 240 (324)
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (447)
T 4eiy_A 259 VKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKY 338 (447)
T ss_dssp HHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHH
T ss_pred hhccchhhhccCCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhcc
Confidence
Q ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCccc
Q psy5192 241 DSRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKE 320 (324)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~ 320 (324)
..+.++..++++|++|++++++++|++||+|+.+..++....+.... .......+..++.++|+++||+||++++++|
T Consensus 339 ~~~~~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~--~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~f 416 (447)
T 4eiy_A 339 LERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSH--APLWLMYLAIVLSHTNSVVNPFIYAYRIREF 416 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccc--cchHHHHHHHHHHHHHhccchhhhHhccHHH
Confidence 01112234578899999999999999999999999888776543221 2234556778899999999999999999999
Q ss_pred ccCC
Q psy5192 321 RKKN 324 (324)
Q Consensus 321 R~~~ 324 (324)
|+++
T Consensus 417 R~~~ 420 (447)
T 4eiy_A 417 RQTF 420 (447)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 17
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=3.3e-41 Score=301.12 Aligned_cols=277 Identities=20% Similarity=0.260 Sum_probs=211.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCccccccc
Q psy5192 29 TSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPFC 108 (324)
Q Consensus 29 ~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 108 (324)
.....+..+++.+++++|++||+++++++.+++++|++++++++|||++|++.++...|..+.. ....|..+...|++.
T Consensus 60 ~~~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~ 138 (520)
T 3v2y_A 60 ENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLR 138 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchH
Confidence 3344778899999999999999999999999999999999999999999999998888876654 556788888999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCcccc
Q psy5192 109 PFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHL 186 (324)
Q Consensus 109 ~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (324)
.++..++..+|++++++||+|||+||+ |++|+. +++++..+++++|++++++++|+++++.....
T Consensus 139 ~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~------------ 205 (520)
T 3v2y_A 139 EGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCISA------------ 205 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCTTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccccC------------
Confidence 999999999999999999999999999 998874 88888999999999999999998876654311
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----------CCCC--------------CC--
Q psy5192 187 KPFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSK----------APGN--------------AQ-- 240 (324)
Q Consensus 187 ~~~c~~~~~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~----------~~~~--------------~~-- 240 (324)
...|...+.... ..|. ...++.+++|+++++++|.+|++.+++++ .+.+ +.
T Consensus 206 ~~~C~~~~~~~~--~~~~-~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~ 282 (520)
T 3v2y_A 206 LSSCSTVLPLYH--KHYI-LFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLT 282 (520)
T ss_dssp GGGBCSSSTTBB--HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECC
T ss_pred CCcccccCCccc--hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccc
Confidence 124765443222 2233 33445689999999999999999998764 0000 00
Q ss_pred ------------------------------------------------------------------------------c-
Q psy5192 241 ------------------------------------------------------------------------------D- 241 (324)
Q Consensus 241 ------------------------------------------------------------------------------~- 241 (324)
.
T Consensus 283 ~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 362 (520)
T 3v2y_A 283 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGF 362 (520)
T ss_dssp SSSCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTC
T ss_pred cccccccccchhhhHHHHhcCCcccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCccccc
Confidence 0
Q ss_pred c-------------------------ccH-H------------------HHhhhhhHHHHHHHHHHHHHHhhhhHHHHHH
Q psy5192 242 S-------------------------RDA-T------------------LMKNKKKVIKMLVIVVALFAICWLPLQTYNV 277 (324)
Q Consensus 242 ~-------------------------~~~-~------------------~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~ 277 (324)
. +.. + +.++++|+++++++++++|++||+|+.+..+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~ 442 (520)
T 3v2y_A 363 TNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLL 442 (520)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHSHHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhHhhhhhccchhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0 0124789999999999999999999999988
Q ss_pred HhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccCC
Q psy5192 278 LQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
+..+....... ......+..+++++|+++||+||++++++||+++
T Consensus 443 ~~~~~~~~~~~--~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~ 487 (520)
T 3v2y_A 443 LDVGCKVKTCD--ILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAF 487 (520)
T ss_dssp HHHTSCTTTCS--TTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHH
T ss_pred HHHHccccccc--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 87654422111 1112334556999999999999999999999864
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=2.4e-40 Score=295.41 Aligned_cols=286 Identities=28% Similarity=0.440 Sum_probs=218.7
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhhheeeeeeeecccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHhhccCCCCccccc
Q psy5192 27 VPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCP 106 (324)
Q Consensus 27 ~~~~~~~~~~~~~~i~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dll~~~~~~~~~~~~~~~~~~~~~~~~C~ 106 (324)
.++.......+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.....+.|..+...|+
T Consensus 177 ~~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~ 256 (514)
T 3sn6_R 177 ADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCE 256 (514)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhh
Confidence 34556677889999999999999999999999999999999999999999999999999999888888889999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhHhhccCCcCC--CccccceeehhHHHHHHHhhhhhheeeceeeeeeecCCCCcc
Q psy5192 107 FCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRI 184 (324)
Q Consensus 107 ~~~~~~~~~~~~s~~~~~~is~dRy~~i~~p~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (324)
+..++..++..+|.+++++||+|||++|++|++|+. +++++..+++++|+++++.++++...............+
T Consensus 257 ~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c--- 333 (514)
T 3sn6_R 257 FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINC--- 333 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHH---
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccce---
Confidence 999999999999999999999999999999998874 888899999999999999986655332211111100000
Q ss_pred cccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---------------------CCccc
Q psy5192 185 HLKPFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGN---------------------AQDSR 243 (324)
Q Consensus 185 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ip~~i~~~~~~~i~~~~~~~~~~~~---------------------~~~~~ 243 (324)
.....|.. ......|.....++.+++|+++++++|.+|++.++++.++.+ ...++
T Consensus 334 ~~~~~~~~----~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (514)
T 3sn6_R 334 YAEETCCD----FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRR 409 (514)
T ss_dssp HHSSSCCC----CCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------------------
T ss_pred eecccccc----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccc
Confidence 00011222 122345666777888899999999999999998876422100 00111
Q ss_pred cHHHHhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHhhhccCccchhHHHHHHHHHHHhhhccccccceeeeecCcccccC
Q psy5192 244 DATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKK 323 (324)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~npiiy~~~~~~~R~~ 323 (324)
.++..++++|.++++++++++|++||+|+.+..++......... .....+..++.++|+++||+||+ ++++||++
T Consensus 410 ~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~----~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~ 484 (514)
T 3sn6_R 410 SSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR----KEVYILLNWIGYVNSGFNPLIYC-RSPDFRIA 484 (514)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSC----HHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc----hHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHH
Confidence 22233567899999999999999999999998887766432222 23455667899999999999999 99999986
Q ss_pred C
Q psy5192 324 N 324 (324)
Q Consensus 324 ~ 324 (324)
+
T Consensus 485 ~ 485 (514)
T 3sn6_R 485 F 485 (514)
T ss_dssp H
T ss_pred H
Confidence 3
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.44 E-value=7.2e-08 Score=49.98 Aligned_cols=25 Identities=28% Similarity=0.372 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhHhhccCCcCC
Q psy5192 118 VSVLTLTAIAVDRHRAILNPLSARP 142 (324)
Q Consensus 118 ~s~~~~~~is~dRy~~i~~p~~~~~ 142 (324)
+|++++++||+|||++|++|++|+.
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~ 26 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNL 26 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGS
T ss_pred cHHHHHHHHHHHHHHHhhhhhhccc
Confidence 6889999999999999999998865
No 20
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.22 E-value=9.9e-08 Score=52.36 Aligned_cols=29 Identities=28% Similarity=0.382 Sum_probs=25.2
Q ss_pred HHHHHhhhccccccceeeeecCcccccCC
Q psy5192 296 FCCDWLAMSNSCYNPFIYGIYNDKERKKN 324 (324)
Q Consensus 296 ~~~~~l~~~~~~~npiiy~~~~~~~R~~~ 324 (324)
.++.+++++||++||+||++.+++||+++
T Consensus 4 ~~~~~l~~~ns~lNPiIY~~~~~~fr~~~ 32 (40)
T 2koe_A 4 AFASMLCLLNSTVNPIIYALRSKDLRHAF 32 (40)
T ss_dssp HHHHHHHHHHHHSSTTTTBTTBHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 45667889999999999999999999863
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.79 E-value=2.5e-06 Score=44.27 Aligned_cols=29 Identities=28% Similarity=0.634 Sum_probs=24.3
Q ss_pred hhhHHHHHHHHHHHHHHhhhhHHHHHHHh
Q psy5192 251 KKKVIKMLVIVVALFAICWLPLQTYNVLQ 279 (324)
Q Consensus 251 ~~~~~~~~~~~~~~f~~~~~P~~i~~~~~ 279 (324)
|+|.+|++..+++.|.+||+|+.+..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 35677899999999999999999876653
No 22
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=95.95 E-value=0.00014 Score=43.41 Aligned_cols=29 Identities=31% Similarity=0.571 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHhhhhheeeeeeeeccc
Q psy5192 34 LLSVFYGTISVLAVVGNFLVIWIVATSRR 62 (324)
Q Consensus 34 ~~~~~~~i~~~~gi~~N~~vl~~i~~~~~ 62 (324)
+..+++.+++++|++||+++++++.++|.
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecc
Confidence 67788999999999999999999887664
No 23
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=23.23 E-value=20 Score=18.32 Aligned_cols=15 Identities=7% Similarity=-0.199 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHhcC
Q psy5192 219 ISFVYARMALRLWGS 233 (324)
Q Consensus 219 ~~~~~~~i~~~~~~~ 233 (324)
..+.|..++|--+|+
T Consensus 13 ~~ifYFl~iRPQ~Kr 27 (37)
T 2rdd_B 13 GLIFYFMILRPQQKR 27 (37)
T ss_dssp HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHhhhHHHH
Confidence 356677776655443
Done!