RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5192
(324 letters)
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide
receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A
2ksb_A
Length = 364
Score = 328 bits (842), Expect = e-112
Identities = 104/326 (31%), Positives = 155/326 (47%), Gaps = 16/326 (4%)
Query: 1 METQNLKGYKSDETVSITEKYLGIYKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATS 60
M+ +S + P I+L + Y I V +VVGN +V+WI+
Sbjct: 1 MDNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAH 60
Query: 61 RRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSV 120
+RM+ VTN F+ NLA A+ + F F A+ W F C F F V S+
Sbjct: 61 KRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASI 120
Query: 121 LTLTAIAVDRHRAILNPLSARPSKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDP 180
++TA+A DR+ AI++PL R S K+ I IW L+ LA P +
Sbjct: 121 YSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRV-- 178
Query: 181 AGRIHLKPFCTNIHLSDDTMILYRRV----LAVVQYAIPLSVISFVYARMALRLWGSKAP 236
C I + +Y +V + V+ Y +PL VI + Y + + LW S+ P
Sbjct: 179 --------VCM-IEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIP 229
Query: 237 GNAQDSRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFF 296
G++ D R + K+KV+KM+++VV FAICWLP + +L I P + +I V+
Sbjct: 230 GDSSD-RYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYL 288
Query: 297 CCDWLAMSNSCYNPFIYGIYNDKERK 322
WLAMS++ YNP IY ND+ R
Sbjct: 289 AIMWLAMSSTMYNPIIYCCLNDRFRL 314
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR
network, structural genomics, GPCR membrane 7TM NOP ORL1
cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo
sapiens}
Length = 434
Score = 268 bits (686), Expect = 1e-87
Identities = 81/326 (24%), Positives = 153/326 (46%), Gaps = 21/326 (6%)
Query: 1 METQNLKGYKSDETVSITEKYLGIYKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATS 60
++ + T + + +P + + + Y + V ++GN LV++++
Sbjct: 94 VKEAQAAAEQLKTTRNAYIQKYLGAFLPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRH 153
Query: 61 RRMQNVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSV 120
+M+ TN +I NLALAD ++ L +PFQ LL W N +C + + S
Sbjct: 154 TKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTST 212
Query: 121 LTLTAIAVDRHRAILNPLSARP--SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYT 178
TLTA++VDR+ AI +P+ A + +A+ IW L+S + P+AI +E+E
Sbjct: 213 FTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEI 272
Query: 179 DPAGRIHLKPFCTNIHLSDDTM--ILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAP 236
C + ++ + + + +P+ VIS Y+ M RL G +
Sbjct: 273 ----------ECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLL 322
Query: 237 GNAQDSRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFF 296
+++ +N +++ +++++VVA+F CW P+Q + + QG+ +S + I+ F
Sbjct: 323 SGSREKD-----RNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRF 377
Query: 297 CCDWLAMSNSCYNPFIYGIYNDKERK 322
C L NSC NP +Y ++ +
Sbjct: 378 -CTALGYVNSCLNPILYAFLDENFKA 402
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal
protei photoreceptor, signaling protein; HET: MAN NAG
BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2
PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A*
2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A*
1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A*
...
Length = 349
Score = 209 bits (535), Expect = 7e-66
Identities = 58/302 (19%), Positives = 118/302 (39%), Gaps = 20/302 (6%)
Query: 25 YKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLF 84
Y +L+ + + +L NFL +++ ++++ N + NLA+AD+ +
Sbjct: 31 YLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFG 90
Query: 85 AIPFQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP-S 143
+L + C F L +++ +L +A++R+ + P+S
Sbjct: 91 GFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFG 150
Query: 144 KLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDT---M 200
+ A + + W ++ AAP + + E + C + +
Sbjct: 151 ENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGM---------QCSCGIDYYTPHEETNN 201
Query: 201 ILYRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDATLMKNKKKVIKMLVI 260
+ + VV + IPL VI F Y ++ + + A + K +K+V +M++I
Sbjct: 202 ESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATT----QKAEKEVTRMVII 257
Query: 261 VVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKE 320
+V F ICWLP + + + A +++ YNP IY + N +
Sbjct: 258 MVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPA---FFAKTSAVYNPVIYIMMNKQF 314
Query: 321 RK 322
R
Sbjct: 315 RN 316
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR
BETA1-adrenoceptor, stabilising mutat biased agonist;
HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A*
2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A*
2ycx_A* 2ycy_A* 2ycz_A*
Length = 315
Score = 170 bits (432), Expect = 5e-51
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 15/301 (4%)
Query: 22 LGIYKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVI 81
+G + +S+ + +L V GN LVI + +++R+Q +TN FI +LA AD+V+
Sbjct: 1 MGAELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVV 60
Query: 82 GLFAIPFQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPL--S 139
GL +PF + W +F+C + L VT S+ TL IA+DR+ AI +P
Sbjct: 61 GLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQ 120
Query: 140 ARPSKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDT 199
+ ++ RAK+ I +W +S+ ++ M + D +
Sbjct: 121 SLMTRARAKVIICTVWAISAL------VSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTN 174
Query: 200 MILYRRVLAVVQYAIPLSVISFVYAR--MALRLWGSKAPGNAQDSRDATLMKNKKKVIKM 257
Y +++ + IPL ++ FV R + K ++ ++ + K +K
Sbjct: 175 RA-YAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKT 233
Query: 258 LVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYN 317
L I++ +F +CWLP N++ + WL +NS NP IY
Sbjct: 234 LGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFN----WLGYANSAMNPIIYCRSP 289
Query: 318 D 318
D
Sbjct: 290 D 290
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor,
chromophore, glycoprotein, lipoprotein, membrane,
palmitate phosphorylation; HET: BOG RET PLM TWT PC1;
2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Length = 448
Score = 169 bits (430), Expect = 2e-49
Identities = 64/319 (20%), Positives = 130/319 (40%), Gaps = 26/319 (8%)
Query: 17 ITEKYLGIYKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLAL 76
+ + +VP ++ L +F G ++ GN +VI++ ++ +Q N FI NLA
Sbjct: 19 VHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAF 78
Query: 77 ADIVIGLFA-IPFQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAIL 135
+D L P + L++W C F+ + +S++T+ I++DR+ I
Sbjct: 79 SDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG 138
Query: 136 NPLSA--RPSKLRAKICIFGIWTLSSFLA-APMAIATGVTMEEEYTDPAGRIHLKPFCTN 192
P++A + S RA I I +W S A P+ T+E C+
Sbjct: 139 RPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLC----------NCSF 188
Query: 193 IHLSDDTM-ILYRRVLAVVQYAIPLSVISFVYARMALRLWGS--------KAPGNAQDSR 243
++S D+ + ++ + P+ +I F Y + + + K + +
Sbjct: 189 DYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRK 248
Query: 244 DATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAM 303
+ ++ K+ +++V+ F + W P +L F + A
Sbjct: 249 AQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALL-AQFGPLEWVTP--YAAQLPVMFAK 305
Query: 304 SNSCYNPFIYGIYNDKERK 322
+++ +NP IY + + K R+
Sbjct: 306 ASAIHNPMIYSVSHPKFRE 324
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor,
nanobody, G protein-coupled RE GPCR, signal
transduction, G protein signaling; HET: P0G; 3.20A
{Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A
Length = 514
Score = 168 bits (427), Expect = 2e-48
Identities = 80/317 (25%), Positives = 125/317 (39%), Gaps = 34/317 (10%)
Query: 25 YKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLF 84
Y ++ + + I + V GN LVI +A R+Q VTN FI +LA AD+V+GL
Sbjct: 175 YAADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLA 234
Query: 85 AIPFQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPL--SARP 142
+PF L + W NF C F + L VT S+ TL IAVDR+ AI +P +
Sbjct: 235 VVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLL 294
Query: 143 SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMIL 202
+K +A++ I +W +S + Y
Sbjct: 295 TKNKARVIILMVWIVSGL------TSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQA- 347
Query: 203 YRRVLAVVQYAIPLSVISFVYAR---------------------MALRLWGSKAPGNAQD 241
Y ++V + +PL ++ FVY+R L
Sbjct: 348 YAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGL 407
Query: 242 SRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWL 301
R + + K +K L I++ F +CWLP N++ I ++ ++ W+
Sbjct: 408 RRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLN----WI 463
Query: 302 AMSNSCYNPFIYGIYND 318
NS +NP IY D
Sbjct: 464 GYVNSGFNPLIYCRSPD 480
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled
receptor, 7 transmembrane receptor, signal
protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A
{Mus musculus} PDB: 4ej4_A* 4djh_A*
Length = 464
Score = 145 bits (368), Expect = 3e-40
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 26/257 (10%)
Query: 33 ILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQA 92
I + Y + V+ + GNFLV++++ +M+ TN +I NLALAD + +PFQ
Sbjct: 18 ITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-TSTLPFQSVN 76
Query: 93 ALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKIC 150
L+ W N +C + + S+ TL ++VDR+ A+ +P+ A + AKI
Sbjct: 77 YLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIV 136
Query: 151 IFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMILYRRVLAVV 210
W LSS + P+ + D F ++ + + + A
Sbjct: 137 NVCNWILSSAIGLPVMFMATTKYRQGSIDCTLT-----FSHPTWYWENLLKICVFIFA-- 189
Query: 211 QYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDATLMKNKKKVIKMLVIVVALFAICWL 270
+ +P+ +I+ Y M LRL ++N +++++ +
Sbjct: 190 -FIMPVLIITVCYGLMILRLKS---------------VRNIFEMLRIDEGLRLKIYKNTE 233
Query: 271 PLQTYNVLQGIFPSINS 287
T + + S +
Sbjct: 234 GYYTIGIGHLLTKSPSL 250
Score = 75.0 bits (184), Expect = 3e-15
Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 222 VYARMALRLWGSKAPGNA---------QDSRDATLMKNKKKVIKMLVIVVALFAICWLPL 272
+A W ++ P A +N +++ +M+++VVA+F +CW P+
Sbjct: 340 AAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPI 399
Query: 273 QTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKK 323
Y +++ +I + + + C L +NSC NP +Y ++ ++
Sbjct: 400 HIYVIIK-ALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 449
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein
engineering, GPCR network, PSI-biology, struct genomics,
membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A
{Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A*
3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Length = 447
Score = 138 bits (349), Expect = 1e-37
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 4/206 (1%)
Query: 28 PTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIP 87
P + I+VLA++GN LV W V + +QNVTN F+ +LA ADI +G+ AIP
Sbjct: 27 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIP 86
Query: 88 FQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPL--SARPSKL 145
F + + C F + S+ +L AIA+DR+ AI PL + +
Sbjct: 87 --FAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGT 144
Query: 146 RAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMILYRR 205
RAK I W LS + + + + + + + M
Sbjct: 145 RAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVY 204
Query: 206 VLAVVQYAIPLSVISFVYARMALRLW 231
+PL ++ VY R+ L
Sbjct: 205 FNFFACVLVPLLLMLGVYLRIFLAAR 230
Score = 58.5 bits (141), Expect = 9e-10
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 233 SKAPGNAQDSRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYIN 292
A R + ++ + K L I+V LFA+CWLPL N P H
Sbjct: 331 RNAYIQKYLERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPD--CSHAPL 388
Query: 293 IVFFCCDWLAMSNSCYNPFIYGIYNDKERK 322
+ + L+ +NS NPFIY + R+
Sbjct: 389 WLMYLAIVLSHTNSVVNPFIYAYRIREFRQ 418
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR,
membrane protein, LCP, mesophase, structural genomics,
PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Length = 488
Score = 137 bits (346), Expect = 5e-37
Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 4/201 (1%)
Query: 28 PTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIP 87
P + I+VLA++GN LV W V + +QNVTN F+ +LA ADI +G+ AIP
Sbjct: 17 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIP 76
Query: 88 FQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPL--SARPSKL 145
F + + C F + S+ +L AIA+DR+ AI PL + +
Sbjct: 77 --FAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGT 134
Query: 146 RAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMILYRR 205
RAK I W LS + + + + + + + M
Sbjct: 135 RAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVY 194
Query: 206 VLAVVQYAIPLSVISFVYARM 226
+PL ++ VY R+
Sbjct: 195 FNFFACVLVPLLLMLGVYLRI 215
Score = 64.8 bits (157), Expect = 7e-12
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 242 SRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWL 301
+ ++ + K L I+V LFA+CWLPL N P + + + L
Sbjct: 381 DAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPL--WLMYLAIVL 438
Query: 302 AMSNSCYNPFIYGIYNDKERK 322
+ +NS NPFIY + R+
Sbjct: 439 SHTNSVVNPFIYAYRIREFRQ 459
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural
genomics, PSI-2, protein structure initiative; HET: ITD
OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A*
3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Length = 502
Score = 136 bits (345), Expect = 9e-37
Identities = 52/298 (17%), Positives = 115/298 (38%), Gaps = 39/298 (13%)
Query: 33 ILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQA 92
I L Y I + +VGN LVI ++ ++++++T+ + +L++AD++ + +PF
Sbjct: 49 IFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLF-VITLPFWAVD 107
Query: 93 ALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP--SKLRAKIC 150
A+ W NF+C + + + SV L I++DR+ AI++ +++ L K+
Sbjct: 108 AVAN-WYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVV 166
Query: 151 IFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMILYRRVLAVV 210
G+W + L P I V+ ++ C + +D +++++ +V
Sbjct: 167 YVGVWIPALLLTIPDFIFANVSEADDRY----------ICDRFYPNDLWVVVFQFQHIMV 216
Query: 211 QYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDATLMKNKKKVIKMLVIVVALFAICWL 270
+P VI Y + +L S N +++++ +
Sbjct: 217 GLILPGIVILSCYCIIISKLSHS--------------GSNIFEMLRIDEGLRLKIYKDTE 262
Query: 271 PLQTYNVLQGIFPSINSYHYINIVFF-----CCDWLAMS------NSCYNPFIYGIYN 317
T + + S + + + + N + + GI
Sbjct: 263 GYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILR 320
Score = 56.5 bits (136), Expect = 4e-09
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 16/117 (13%)
Query: 223 YARMALRLWGSKAPGNAQ----------DSRDATLMKNKKKVIKMLVIVVALFAICWLP- 271
+A W ++ P A+ + K+K +K VI++ F CWLP
Sbjct: 370 AVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPY 429
Query: 272 -----LQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIYGIYNDKERKK 323
+ ++ +L+ I + ++ + LA + C NP +Y K +
Sbjct: 430 YIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTS 486
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G
protein-coupled receptor, GPCR, SI protein-antagonist
complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Length = 467
Score = 130 bits (328), Expect = 1e-34
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 28 PTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIP 87
T ++ + + G++S++ ++GN LV+ + +R +Q V N F+ +LA AD++IG+F++
Sbjct: 19 KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMN 78
Query: 88 FQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLS--ARPSKL 145
++ W L +C + + SV+ L I+ DR+ + PL+ + +
Sbjct: 79 LYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTK 138
Query: 146 RAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMILYRR 205
A + I W LS L AP AI + T G C S+ +
Sbjct: 139 MAGMMIAAAWVLSFILWAP-AILFWQFIVGVRTVEDGE------CYIQFFSNAAVTFG-- 189
Query: 206 VLAVVQYAIPLSVISFVYARM 226
A+ + +P+ +++ +Y +
Sbjct: 190 -TAIAAFYLPVIIMTVLYWHI 209
Score = 54.3 bits (130), Expect = 2e-08
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 248 MKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSC 307
+KKV + ++ ++ F I W P ++ I + WL NS
Sbjct: 380 PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGY----WLCYINST 435
Query: 308 YNPFIYGIYNDKERK 322
NP Y + N +K
Sbjct: 436 INPACYALCNATFKK 450
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics,
PSI-biology, membrane protein, GPCR NET GPCR, hydrolase;
HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Length = 452
Score = 129 bits (324), Expect = 3e-34
Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 27 VPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAI 86
+ + ++ L V TI ++ V N LV++ V + R++ V N +I +L++AD+++G +
Sbjct: 3 MASPQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVM 62
Query: 87 PFQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLS--ARPSK 144
P L+ +W+L +C F + + T S+ ++ + +DR+R++ PL +K
Sbjct: 63 PMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTK 122
Query: 145 LRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMILYR 204
RA I G W LS P+ + + + + C +
Sbjct: 123 TRASATILGAWFLSFLWVIPI-------LGWNHFMQQTSVRREDKCETDFYDVTWFKVM- 174
Query: 205 RVLAVVQYAIPLSVISFVYARM 226
A++ + +P ++ + YA++
Sbjct: 175 --TAIINFYLPTLLMLWFYAKI 194
Score = 55.5 bits (133), Expect = 9e-09
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 239 AQDSRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCC 298
M ++K K L ++A F +CW+P + ++ + + H
Sbjct: 356 TGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTI--- 412
Query: 299 DWLAMSNSCYNPFIYGIYNDKERK 322
WL NS NP IY + N+ +K
Sbjct: 413 -WLGYINSTLNPLIYPLCNENFKK 435
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion,
lipidic cubic phase, lipidic, mesophase, cholesterol,
membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo
sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A*
3pds_A*
Length = 500
Score = 128 bits (322), Expect = 1e-33
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 13/226 (5%)
Query: 5 NLKGYKSDETVSITEKYLGIYKVPTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQ 64
N + S + + ++ + + I + V GN LVI +A R+Q
Sbjct: 13 NGSAFLLAPNRSHAPDHDVTQQRDEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQ 72
Query: 65 NVTNCFIANLALADIVIGLFAIPFQFQAALLQRWNLPNFMCPFCPFVQC--LTVTVSVLT 122
VTN FI +LA AD+V+GL +PF L++ W NF C F + L VT S+ T
Sbjct: 73 TVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEF--WTSIDVLCVTASIET 130
Query: 123 LTAIAVDRHRAILNPLS--ARPSKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDP 180
L IAVDR+ AI +P + +K +A++ I +W +S + + +
Sbjct: 131 LCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQ--EA 188
Query: 181 AGRIHLKPFCTNIHLSDDTMILYRRVLAVVQYAIPLSVISFVYARM 226
+ C + Y ++V + +PL ++ FVY+R+
Sbjct: 189 INCYAEETCCD---FFTNQ--AYAIASSIVSFYVPLVIMVFVYSRV 229
Score = 54.3 bits (130), Expect = 2e-08
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 242 SRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWL 301
+ K +K L I++ F +CWLP N++ I ++ ++ W+
Sbjct: 394 WDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLN----WI 449
Query: 302 AMSNSCYNPFIYGIYND 318
NS +NP IY D
Sbjct: 450 GYVNSGFNPLIYCRSPD 466
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics,
PSI-2, protein structure initiative, AC technologies
center for gene to 3D structure; HET: ETQ MAL; 2.89A
{Homo sapiens}
Length = 481
Score = 123 bits (309), Expect = 6e-32
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 33 ILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIPFQFQA 92
++ Y + + V GN LV V R +Q TN + +LA+AD+++ +P+
Sbjct: 39 AYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYL 98
Query: 93 ALL-QRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLS-----ARPSKLR 146
+ WN C + + T S+ L AI++DR+ A++ P+ + S R
Sbjct: 99 EVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRR 158
Query: 147 AKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMILYRRV 206
+ I +W L+ ++ P+ T + C+ +S+ ++Y
Sbjct: 159 VALMITAVWVLAFAVSCPLLFGFNTTGDPTV------------CS---ISNPDFVIY--- 200
Query: 207 LAVVQYAIPLSVISFVYARM 226
+VV + +P V VYAR+
Sbjct: 201 SSVVSFYLPFGVTVLVYARI 220
Score = 56.3 bits (135), Expect = 4e-09
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 242 SRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWL 301
+ +KK +M+ IV+ F +CWLP +VL + + + WL
Sbjct: 387 WDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATT---WL 443
Query: 302 AMSNSCYNPFIYGIYNDKERK 322
NS NP IY +N + RK
Sbjct: 444 GYVNSALNPVIYTTFNIEFRK 464
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor,
lipid receptor, multiple sclerosi autoimmunity,
structural genomics, PSI-biology; HET: ML5 NAG; 2.80A
{Homo sapiens} PDB: 3v2w_A*
Length = 520
Score = 114 bits (285), Expect = 2e-28
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Query: 28 PTSIIILLSVFYGTISVLAVVGNFLVIWIVATSRRMQNVTNCFIANLALADIVIGLFAIP 87
+ I L SV + I ++ N V+ + +++ FI NLAL+D++ G+
Sbjct: 59 KENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTA 118
Query: 88 FQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARP-SKLR 146
+ + L + ++ SV +L AIA++R+ +L + R
Sbjct: 119 N-LLLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLKMKLHNGSNNFR 177
Query: 147 AKICIFGIWTLSSFLAAP 164
+ I W +S L
Sbjct: 178 LFLLISACWVISLILGGL 195
Score = 59.9 bits (144), Expect = 3e-10
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 233 SKAPGNAQDSRDATLMKNKKKVIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYIN 292
A+ ++K ++IV+++F CW PL +L
Sbjct: 398 ITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFR 457
Query: 293 IVFFCCDWLAMSNSCYNPFIYGIYNDKERK 322
+F LA+ NS NP IY + N + R+
Sbjct: 458 AEYFL--VLAVLNSGTNPIIYTLTNKEMRR 485
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.8 bits (95), Expect = 5e-04
Identities = 54/323 (16%), Positives = 95/323 (29%), Gaps = 105/323 (32%)
Query: 21 YLGIYKVPTS--IIILLSV--FYGTISVLAV-VGNFLVIWIVATSRRMQNVTNCFIANLA 75
YL +P S +I ++ + + T +L G ++ T
Sbjct: 230 YLL--SIPISCPLIGVIQLAHYVVTAKLLGFTPGELR--------SYLKGATGH------ 273
Query: 76 LADIVIGLFAIPFQFQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAIL 135
+V + AI A W +F F + +TV L I V + A
Sbjct: 274 SQGLVTAV-AI------AETDSW--ESF---FVSVRKAITV------LFFIGVRCYEAY- 314
Query: 136 NPLSARPSKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFC--TNI 193
P ++ P + S PM + +T E ++ + TN
Sbjct: 315 -PNTSLPPSILEDSLENNEGVPS-----PMLSISNLTQE----------QVQDYVNKTNS 358
Query: 194 HLSDDTMI---LY--RR--VLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDAT 246
HL + L + V++ P S+ + LR +KAP SR
Sbjct: 359 HLPAGKQVEISLVNGAKNLVVS----GPPQSLYGLN---LTLR--KAKAPSGLDQSR--I 407
Query: 247 LMKNKKKVIKM--LVI-----------VVALF-------AICWLP--LQ-----TYN--V 277
+K L + L + + +Q T++
Sbjct: 408 PFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSD 467
Query: 278 LQGIFPSINSYHYINIVFFCCDW 300
L+ + SI+ I+ W
Sbjct: 468 LRVLSGSISERIVDCIIRLPVKW 490
Score = 38.5 bits (89), Expect = 0.003
Identities = 50/332 (15%), Positives = 88/332 (26%), Gaps = 123/332 (37%)
Query: 12 DETVSITE---KYLGIY--------KVPTSIIILLSV-------FYGTISVLAVVGNFLV 53
DE + E K+LG Y KV +L + + A+ L
Sbjct: 52 DEPTTPAELVGKFLG-YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQ 110
Query: 54 IWIVATSRRMQNVTNCFIANL------------ALADIV----IGLFAIPF--Q------ 89
+ + + N A + AL V L AI F Q
Sbjct: 111 ENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAI-FGGQGNTDDY 169
Query: 90 FQAALLQRWNLPNFMCPFCPFVQCLTVTVSVLTLTAIAVDRHRAILNPLSARPSKLRAKI 149
F+ L + + V L + L+ L K+
Sbjct: 170 FEE-LRDLYQTYH------VLVGDL-------------IKFSAETLSELIRTTLDAE-KV 208
Query: 150 CIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMILYRRVLAV 209
G+ + +L P T +++Y L
Sbjct: 209 FTQGL-NILEWLENP-----SNTPDKDY-----------------------------LLS 233
Query: 210 VQYAIPLS-VISFVYARMALRLWGSKAPGNAQDSRDATLMKNKKKVIKMLVIVVALF--- 265
+ + PL VI + + +L G PG + ++ +V A+
Sbjct: 234 IPISCPLIGVIQLAHYVVTAKLLG-FTPGELRSYLKGATGHSQG-------LVTAVAIAE 285
Query: 266 AICWLPLQTYNVLQGIFPSINSYHYINIVFFC 297
W +++ V + I ++FF
Sbjct: 286 TDSW---ESFFV--------SVRKAITVLFFI 306
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 34.4 bits (78), Expect = 0.060
Identities = 54/369 (14%), Positives = 106/369 (28%), Gaps = 125/369 (33%)
Query: 4 QNLKGYKSDETVSITEKYLGI--YKVPTSIIILLSVFYGTIS--VLAVVGNFLVI----- 54
+ DE S+ KYL +P ++ T + L+++ +
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVL--------TTNPRRLSIIAESIRDGLATW 344
Query: 55 --WIVATSRRMQNVTNCFIANLALADI-----VIGLF----AIPFQFQAALLQR-WNLPN 102
W ++ + + L A+ + +F IP LL W
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP----TILLSLIWFDVI 400
Query: 103 FMCPFCPFVQCLTVTV-------SVLTLTAIAVDR----------HRAIL---NPLSARP 142
+ ++ S +++ +I ++ HR+I+ N
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD 460
Query: 143 SKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIHLSDDTMIL 202
S + + S + + HLK NI + M L
Sbjct: 461 SDDLIPPYLDQYF--YSHIG--------------H-------HLK----NIEHPER-MTL 492
Query: 203 YRRVLAVVQYAIPLSVISFVYARMALRLWGSKAPGNAQDSRDATL--MKNKKKVI----- 255
+R V L F+ + +R + NA S TL +K K I
Sbjct: 493 FRMVF--------LD-FRFLEQK--IRHDST--AWNASGSILNTLQQLKFYKPYICDNDP 539
Query: 256 --KMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCCDWLAMSNSCYNPFIY 313
+ LV + F L I ++ Y +++ +A+
Sbjct: 540 KYERLVNAILDF------------LPKIEENLICSKYTDLL-----RIALMAE-DE---- 577
Query: 314 GIYNDKERK 322
I+ + ++
Sbjct: 578 AIFEEAHKQ 586
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein;
NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Length = 32
Score = 30.1 bits (68), Expect = 0.067
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 117 TVSVLTLTAIAVDRHRAILNPLS 139
T S++ L AI++DR+ +I +
Sbjct: 1 TSSIVHLCAISLDRYWSITQAIE 23
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.5 bits (65), Expect = 0.86
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 7/31 (22%)
Query: 144 KLRAKICIFGIWTLSSFLAAPMAIATGVTME 174
KL+A + ++ S AP A+A TME
Sbjct: 24 KLQASL---KLYADDS---AP-ALAIKATME 47
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7;
2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1
PDB: 2p0m_A*
Length = 662
Score = 27.9 bits (61), Expect = 5.3
Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 138 LSARPSKLRAKICIFGIWTLSSFLAAPMAIATGVTMEEEYTDPAGRIHLKPFCTNIH 194
++ P+ ++ + + +W L P+ + G EE ++ P R L+ F +
Sbjct: 577 MATLPNLKQSSLQMSIVWQLGRD--QPIMVPLGQHQEEYFSGPEPRAVLEKFREELA 631
>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural
killer cell receptor, lectin, C-type lectin, immune
system; 2.27A {Homo sapiens} SCOP: d.169.1.1
Length = 199
Score = 26.9 bits (59), Expect = 8.9
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 254 VIKMLVIVVALFAICWLPLQTYNVLQGIFPSINSYHYINIVFFCC--DWLAMSNSCY 308
V+ ++ I + + A+ L + YN S+ S +++ C DW+ CY
Sbjct: 45 VMNVVFITILIIALIALSVGQYNCPGQYTFSMPSDSHVS----SCSEDWVGYQRKCY 97
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.328 0.139 0.434
Gapped
Lambda K H
0.267 0.0536 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,931,718
Number of extensions: 287251
Number of successful extensions: 658
Number of sequences better than 10.0: 1
Number of HSP's gapped: 597
Number of HSP's successfully gapped: 36
Length of query: 324
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 230
Effective length of database: 4,077,219
Effective search space: 937760370
Effective search space used: 937760370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.2 bits)