Your job contains 1 sequence.
>psy5195
MFGRPSKVSTSQNKSLHLTGIGLAVQAFYINLTLDTVMGGEYAELQPVGPPLINTPGVWG
VNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAY
GGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQYG
SKDHRSRDGVGNAFGGAYHDAHLKTNAHGNKQNFGGGQGFGTKTGYVNNVGDTKLYGGGV
GQGYTGTFNNGFNPALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQP
YPSHPVGLVTRSSTKYQIPAPTKLFVDKAKDVKS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5195
(334 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2019622 - symbol:GR-RBP5 "AT1G74230" species:3... 139 3.7e-07 1
ZFIN|ZDB-GENE-030131-618 - symbol:hnrnpa0l "heterogeneous... 136 9.4e-07 1
DICTYBASE|DDB_G0292870 - symbol:pex13 "peroxin 13" specie... 139 1.4e-06 1
UNIPROTKB|F1PB61 - symbol:TAF15 "Uncharacterized protein"... 139 1.4e-06 1
MGI|MGI:1924384 - symbol:Hnrnpa0 "heterogeneous nuclear r... 132 2.9e-06 1
UNIPROTKB|F1S187 - symbol:LOC100518332 "Uncharacterized p... 133 3.9e-06 1
UNIPROTKB|Q92804 - symbol:TAF15 "TATA-binding protein-ass... 134 5.6e-06 1
WB|WBGene00017484 - symbol:F15E6.3 species:6239 "Caenorha... 109 8.2e-06 1
UNIPROTKB|E9PSU5 - symbol:E9PSU5 "Uncharacterized protein... 129 9.3e-06 1
MGI|MGI:2157572 - symbol:Krtap19-2 "keratin associated pr... 107 1.3e-05 1
MGI|MGI:96696 - symbol:Krt9 "keratin 9" species:10090 "Mu... 131 1.7e-05 1
RGD|628785 - symbol:Krt9 "keratin 9" species:10116 "Rattu... 130 1.7e-05 1
UNIPROTKB|E2RFV7 - symbol:HNRNPA3 "Uncharacterized protei... 126 2.2e-05 1
UNIPROTKB|F2Z5B4 - symbol:HNRNPA3 "Uncharacterized protei... 126 2.2e-05 1
RGD|727807 - symbol:Hnrnpa3 "heterogeneous nuclear ribonu... 126 2.2e-05 1
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 132 2.7e-05 1
TAIR|locus:2119916 - symbol:AT4G29030 "AT4G29030" species... 104 2.9e-05 1
FB|FBgn0263396 - symbol:sqd "squid" species:7227 "Drosoph... 123 4.1e-05 1
UNIPROTKB|F1Q3G7 - symbol:HNRNPA1 "Uncharacterized protei... 123 5.0e-05 1
UNIPROTKB|F1Q3U2 - symbol:KRT76 "Uncharacterized protein"... 100 5.7e-05 2
TAIR|locus:2159401 - symbol:GR-RBP3 "glycine-rich RNA-bin... 120 7.2e-05 1
ZFIN|ZDB-GENE-040426-1546 - symbol:zgc:66127 "zgc:66127" ... 122 7.2e-05 1
UNIPROTKB|E2RBV8 - symbol:HNRNPA0 "Uncharacterized protei... 120 7.3e-05 1
TAIR|locus:2058964 - symbol:AT2G05510 "AT2G05510" species... 100 8.0e-05 1
UNIPROTKB|Q13151 - symbol:HNRNPA0 "Heterogeneous nuclear ... 119 9.1e-05 1
RGD|1563684 - symbol:Hnrnpa0 "heterogeneous nuclear ribon... 116 9.3e-05 1
UNIPROTKB|G3N220 - symbol:G3N220 "Uncharacterized protein... 118 0.00012 1
UNIPROTKB|F1LNG4 - symbol:Hnrnpa3 "Heterogeneous nuclear ... 119 0.00012 1
FB|FBgn0004554 - symbol:Edg91 "Ecdysone-dependent gene 91... 108 0.00013 1
UNIPROTKB|F1NCI5 - symbol:HNRNPA0 "Uncharacterized protei... 117 0.00018 1
TAIR|locus:1006230415 - symbol:AT4G01985 "AT4G01985" spec... 120 0.00021 1
UNIPROTKB|F6RSR1 - symbol:HNRNPA0 "Uncharacterized protei... 116 0.00021 1
ZFIN|ZDB-GENE-030912-14 - symbol:hnrnpa1 "heterogeneous n... 118 0.00022 1
UNIPROTKB|E1BZE6 - symbol:LOC100859627 "Uncharacterized p... 117 0.00023 1
UNIPROTKB|K7EKB2 - symbol:TAF15 "TATA-binding protein-ass... 112 0.00024 1
UNIPROTKB|K7EQQ3 - symbol:KRT9 "Keratin, type I cytoskele... 117 0.00025 1
ZFIN|ZDB-GENE-030131-2249 - symbol:hnrnpa0a "heterogeneou... 115 0.00026 1
UNIPROTKB|J9NWS3 - symbol:KRT9 "Keratin, type I cytoskele... 119 0.00027 1
UNIPROTKB|F1RH94 - symbol:HNRNPA0 "Uncharacterized protei... 115 0.00028 1
UNIPROTKB|E1BEG2 - symbol:HNRNPA3 "Uncharacterized protei... 116 0.00030 1
UNIPROTKB|O18740 - symbol:KRT9 "Keratin, type I cytoskele... 120 0.00031 1
TAIR|locus:2178520 - symbol:AT5G46730 "AT5G46730" species... 114 0.00031 1
UNIPROTKB|F1Q0N7 - symbol:KRT9 "Keratin, type I cytoskele... 119 0.00031 1
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd... 119 0.00038 1
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica... 119 0.00038 1
UNIPROTKB|H9L3M0 - symbol:LOC396480 "Uncharacterized prot... 105 0.00043 1
TAIR|locus:2168848 - symbol:AT5G40490 species:3702 "Arabi... 115 0.00047 1
WB|WBGene00018865 - symbol:F55A12.6 species:6239 "Caenorh... 115 0.00047 1
UNIPROTKB|P35527 - symbol:KRT9 "Keratin, type I cytoskele... 117 0.00049 1
TAIR|locus:2077547 - symbol:AT3G07030 species:3702 "Arabi... 114 0.00057 1
DICTYBASE|DDB_G0289901 - symbol:DDB_G0289901 "unknown" sp... 119 0.00062 1
UNIPROTKB|F1M108 - symbol:F1M108 "Uncharacterized protein... 111 0.00070 1
TAIR|locus:2129590 - symbol:AT4G14300 species:3702 "Arabi... 113 0.00075 1
CGD|CAL0000304 - symbol:HYR3 species:5476 "Candida albica... 118 0.00090 1
UNIPROTKB|Q59XA7 - symbol:HYR3 "Possible cell wall protei... 118 0.00090 1
>TAIR|locus:2019622 [details] [associations]
symbol:GR-RBP5 "AT1G74230" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005507 eggNOG:COG0724
EMBL:AC020579 HSSP:Q14103 KO:K12741 EMBL:BT002037 EMBL:BT006315
IPI:IPI00516639 PIR:F96770 RefSeq:NP_177563.1 UniGene:At.18152
ProteinModelPortal:Q9C909 SMR:Q9C909 PaxDb:Q9C909 PRIDE:Q9C909
EnsemblPlants:AT1G74230.1 GeneID:843763 KEGG:ath:AT1G74230
GeneFarm:3954 TAIR:At1g74230 InParanoid:Q9C909 OMA:TERGSGF
ProtClustDB:CLSN2914559 Genevestigator:Q9C909 Uniprot:Q9C909
Length = 289
Score = 139 (54.0 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 48/148 (32%), Positives = 62/148 (41%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYG--------AGGYTDANGFYHGN-LGT 110
G GA G Y G G N + N G GYG AGGY N Y GN +G
Sbjct: 133 GGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSSYGGNAGGY-GGNPPYSGNAVGG 191
Query: 111 KNGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHES-GNKATYYDD 169
GY G +GGG G+ GGS +G + AGF + ++ GN + +
Sbjct: 192 GGGY--GSNFGGGGGYGVAGGVGGSENFAQGSSTN---AGFDDKFESNQPLGNDTDHQTE 246
Query: 170 GLGHGGSIQYGSKDHRSRDGV-GNAFGG 196
G GG Q+G D++ D GN G
Sbjct: 247 S-GLGGDEQFGGSDNQFGDAENGNTENG 273
>ZFIN|ZDB-GENE-030131-618 [details] [associations]
symbol:hnrnpa0l "heterogeneous nuclear
ribonucleoprotein A0, like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-618
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 EMBL:BX088707
EMBL:BC050513 IPI:IPI00489762 UniGene:Dr.75590 UniGene:Dr.79301
SMR:Q7ZU48 STRING:Q7ZU48 Ensembl:ENSDART00000052511
InParanoid:Q7ZU48 OMA:ICRRIAP Uniprot:Q7ZU48
Length = 302
Score = 136 (52.9 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 39/115 (33%), Positives = 54/115 (46%)
Query: 72 GVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYGGG-KD-IGLT 129
G G G+ + +G G G GGY + G+ + G +GYD + YGGG D +G
Sbjct: 184 GRGGRGGRGMGRGSGFG--GGGRGGYYNDYGYQNNGFGNNSGYDSQNGYGGGYSDQMGGG 241
Query: 130 NVQGGSYGDVRGRNRGHQVAGFS---TSYNKHESGNKATY-YDDGLGHGGSIQYG 180
G Y D G G Q +G+ T Y + SG +++ Y G G GGS YG
Sbjct: 242 YGNGNGYSDF-GEGYGQQASGYGAMKTGYGNYSSGRQSSGPYPRGGGGGGSGGYG 295
>DICTYBASE|DDB_G0292870 [details] [associations]
symbol:pex13 "peroxin 13" species:44689
"Dictyostelium discoideum" [GO:0016560 "protein import into
peroxisome matrix, docking" evidence=IEA;ISS] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005779 "integral
to peroxisomal membrane" evidence=ISS] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] Pfam:PF00018 InterPro:IPR001452
InterPro:IPR007223 Pfam:PF04088 PROSITE:PS50002 SMART:SM00326
dictyBase:DDB_G0292870 GenomeReviews:CM000155_GR EMBL:AAFI02000197
GO:GO:0005779 SUPFAM:SSF50044 HSSP:Q64010 GO:GO:0016560
RefSeq:XP_629403.1 ProteinModelPortal:Q54CL3
EnsemblProtists:DDB0238077 GeneID:8628922 KEGG:ddi:DDB_G0292870
eggNOG:NOG312130 OMA:SWMEALH Uniprot:Q54CL3
Length = 570
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/146 (30%), Positives = 58/146 (39%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDV 116
GV G +G Y +Y G ++G + YG YG+GG +G Y +L GY
Sbjct: 94 GVGGSSG-YRSSYGGGYRDSYSSGGYGSSGYGS-SYGSGG----SGGYGSSLYGGGGYSS 147
Query: 117 GHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
G YGG G + GG YG G G G + Y G + Y G G G
Sbjct: 148 G-GYGGS---GYGSSYGGGYGSSYGSGYGSSYGG--SGYGSSYGGGYGSSYGGGYGGGYG 201
Query: 177 IQYGSKDHRSRDGVGNAFGGAYHDAH 202
YG + + + DG G A H
Sbjct: 202 GGYGQRGYDNMDGKGGALQSVVSSGH 227
>UNIPROTKB|F1PB61 [details] [associations]
symbol:TAF15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 CTD:8148 KO:K14651
OMA:YGNQGSQ EMBL:AAEX03006620 EMBL:AAEX03006619 RefSeq:XP_548255.2
ProteinModelPortal:F1PB61 Ensembl:ENSCAFT00000028877 GeneID:491135
KEGG:cfa:491135 Uniprot:F1PB61
Length = 571
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 47/141 (33%), Positives = 59/141 (41%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYG-DRGYGAGGYTDANGFYHGNLGTKNGYD 115
G +G + + G Y +G G ++ YG DRG G GG D G Y G+ G G D
Sbjct: 424 GGYGGDRSGGGGYGGDRSGGGYGGDRSGGGYGGDRGGGYGG--DRGGGYGGDRGGGYGGD 481
Query: 116 VGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGG 175
G YGG + G +GG YG RG G + G Y G D G G+GG
Sbjct: 482 RGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRSGG---GYGGDRGGGGGYGGDRGGGYGG 538
Query: 176 SIQYGSKDHRSRDGVGNAFGG 196
+ G R G G GG
Sbjct: 539 D-RSGGGYGGDRGGYGGKMGG 558
>MGI|MGI:1924384 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IDA]
[GO:0017091 "AU-rich element binding" evidence=ISO;IDA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1924384
GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0030529 eggNOG:COG0724
HSSP:P09651 GO:GO:0070935 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 CTD:10949
KO:K12894 OrthoDB:EOG4W6NX4 EMBL:AK019388 EMBL:AC165251
IPI:IPI00109813 RefSeq:NP_084148.1 UniGene:Mm.490274
ProteinModelPortal:Q9CX86 SMR:Q9CX86 STRING:Q9CX86
PhosphoSite:Q9CX86 PaxDb:Q9CX86 PRIDE:Q9CX86
Ensembl:ENSMUST00000007980 GeneID:77134 KEGG:mmu:77134
UCSC:uc007qtf.2 InParanoid:Q9CX86 OMA:EDNQHAL ChiTaRS:HNRNPA0
NextBio:346544 Bgee:Q9CX86 Genevestigator:Q9CX86 Uniprot:Q9CX86
Length = 305
Score = 132 (51.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 40/109 (36%), Positives = 47/109 (43%)
Query: 88 GDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQ 147
G G G GG D NG G G GY+ YGG G GGSYG G + G+
Sbjct: 198 GRGGGGGGGGRDQNGLAKGGGGGGGGYNSYGGYGGYGAYGGGGGGGGSYG---GSDYGNG 254
Query: 148 VAGFSTSYNKHESGNKATYYDDGLGHGGSIQYGSKDHRSRDGVGNAFGG 196
GF SY++H+S G G GGS S R G G +GG
Sbjct: 255 FGGFG-SYSQHQSSYGPMKSGGGGGGGGSWGGRSNSGPYRGGYGGGYGG 302
>UNIPROTKB|F1S187 [details] [associations]
symbol:LOC100518332 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 GeneTree:ENSGT00530000063105
EMBL:CU896616 Ensembl:ENSSSCT00000019273 OMA:TESSSGX Uniprot:F1S187
Length = 406
Score = 133 (51.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 51/154 (33%), Positives = 61/154 (39%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDR---GYGA----GGYT-DANGFYHGNL 108
G G G Y G + G G +G GDR GYG GGY D G Y G+
Sbjct: 213 GRGGDRGGYGGDRSGGGYGGDRSGGGGYG--GDRSGGGYGGDRSGGGYGGDRGGGYGGDR 270
Query: 109 GTKNGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRG-HQVAGFSTSYNKHESGNKATYY 167
G G D G YGG + G +GG YG RG G + G+ G++ Y
Sbjct: 271 GGGYGGDRGGGYGGDRSGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYG 330
Query: 168 DDGLGHGGSIQ---YGSKDHRSRDGVGNAFGGAY 198
D G+GG YG D S G G G Y
Sbjct: 331 GDRGGYGGDRSGGGYGG-DRGSGSGYGGDRSGGY 363
Score = 132 (51.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 45/139 (32%), Positives = 54/139 (38%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHA 119
G G +G G G G + GDRG G GG D +G Y G+ G G D G
Sbjct: 248 GYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGG--DRSGGYGGDRGGGYGGDRGGG 305
Query: 120 YGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQY 179
YGG + G +GG YG RG G + G+ G G G+GG
Sbjct: 306 YGGDRGGGYGGDRGGGYGGDRGGYGGDR-GGYG---GDRSGGGYGGDRGSGSGYGGDRSG 361
Query: 180 GSKDHRSRDGVGNAFGGAY 198
G RS G G G Y
Sbjct: 362 GYGGDRSGGGYGGDRSGGY 380
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 48/139 (34%), Positives = 55/139 (39%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHA 119
G G G Y G G G ++ GDRG G GG D G Y G+ G G D G
Sbjct: 265 GYGGDRGGGYG-GDRGGGYGGDRSGGYGGDRGGGYGG--DRGGGYGGDRGGGYGGDRGGG 321
Query: 120 YGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGG--SI 177
YGG + G +GG GD G G G + Y SG G G+GG S
Sbjct: 322 YGGDRG-GYGGDRGGYGGDRSGGGYGGD-RGSGSGYGGDRSGGYGGDRSGG-GYGGDRSG 378
Query: 178 QYGSKDHRSRDGVGNAFGG 196
YG R G G GG
Sbjct: 379 GYGG----DRGGYGGKMGG 393
Score = 113 (44.8 bits), Expect = 0.00074, P = 0.00074
Identities = 46/148 (31%), Positives = 61/148 (41%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYT-DANGFYHGNLGTKNGY- 114
G G G Y G G + G ++ YG G GGY D +G +G + GY
Sbjct: 201 GYGGERG-YRGRGGRGGDRGGYGGDRSGGGYGGDRSGGGGYGGDRSGGGYGGDRSGGGYG 259
Query: 115 -DVGHAYGGGKDIGLTNVQGGSYG-DVRGRNRGHQVAGFSTSYNKHESGNKATYY--DDG 170
D G YGG + G +GG YG D G G + G+ G++ Y D G
Sbjct: 260 GDRGGGYGGDRGGGYGGDRGGGYGGDRSGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRG 319
Query: 171 LGHGGSIQYGSKDHRSRDGVGNAFGGAY 198
G+GG + G R G G+ GG Y
Sbjct: 320 GGYGGD-RGGYGGDRGGYG-GDRSGGGY 345
>UNIPROTKB|Q92804 [details] [associations]
symbol:TAF15 "TATA-binding protein-associated factor 2N"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:CH471147 eggNOG:NOG240581 HOGENOM:HOG000038010 EMBL:AC015849
EMBL:U51334 EMBL:X98893 EMBL:AB010067 EMBL:AY197697 EMBL:AK313223
IPI:IPI00020194 IPI:IPI00294426 PIR:S71954 RefSeq:NP_003478.1
RefSeq:NP_631961.1 UniGene:Hs.402752 ProteinModelPortal:Q92804
SMR:Q92804 IntAct:Q92804 STRING:Q92804 PhosphoSite:Q92804
DMDM:8928305 PaxDb:Q92804 PRIDE:Q92804 DNASU:8148
Ensembl:ENST00000311979 GeneID:8148 KEGG:hsa:8148 UCSC:uc002hkc.3
UCSC:uc002hkd.3 CTD:8148 GeneCards:GC17P034136 HGNC:HGNC:11547
HPA:HPA052059 MIM:601574 neXtProt:NX_Q92804 PharmGKB:PA36322
HOVERGEN:HBG005755 InParanoid:Q92804 KO:K14651 OMA:YGNQGSQ
OrthoDB:EOG4MW872 PhylomeDB:Q92804 ChiTaRS:TAF15 GenomeRNAi:8148
NextBio:30819 PMAP-CutDB:Q92804 ArrayExpress:Q92804 Bgee:Q92804
CleanEx:HS_TAF15 Genevestigator:Q92804 GermOnline:ENSG00000172660
Uniprot:Q92804
Length = 592
Score = 134 (52.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 48/144 (33%), Positives = 64/144 (44%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYG-DRGYGAGGYT-DANGFYHGNLGTKNGY 114
G G G Y G G + G ++ YG DR G GGY+ D +G +G + GY
Sbjct: 398 GYGGERG-YRGRGGRGGDRGGYGGDRSGGGYGGDRSSG-GGYSGDRSGGGYGGDRSGGGY 455
Query: 115 --DVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLG 172
D G YGG + G +GG YG RG G + G+ + G++ Y D G
Sbjct: 456 GGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGY-GGDRGGYGGDRGG 514
Query: 173 HGGSIQYGSKDHRSRDGVGNAFGG 196
+GG + G RSR G G GG
Sbjct: 515 YGGD-RGGYGGDRSRGGYGGDRGG 537
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 49/146 (33%), Positives = 61/146 (41%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYG-DRGYGAGGYTDANGFYHGNLGTKNGYD 115
G +G + + G Y+ +G G ++ YG DRG G GG D G Y G+ G G D
Sbjct: 425 GGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGG--DRGGGYGGDRGGGYGGD 482
Query: 116 VGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQ--VAGFSTSYNKHES-GNKATYYDDGLG 172
G YGG + G +GG YG RG G + G Y S G G G
Sbjct: 483 RG-GYGGDRGGGYGGDRGG-YGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG 540
Query: 173 HGGSIQYGSKDHRSRDGVGNAFGGAY 198
+GG G RS G G GG Y
Sbjct: 541 YGGDRSGGYGGDRSGGGYGGDRGGGY 566
>WB|WBGene00017484 [details] [associations]
symbol:F15E6.3 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] GO:GO:0000003
GeneTree:ENSGT00700000104719 EMBL:U24124 EMBL:U42991 EMBL:FO081151
PIR:T32631 RefSeq:NP_500537.1 UniGene:Cel.19744 HSSP:P10930
EnsemblMetazoa:F15E6.3 GeneID:177195 KEGG:cel:CELE_F15E6.3
CTD:177195 WormBase:F15E6.3 OMA:AIVAAQW NextBio:895740
Uniprot:G5ECT2
Length = 118
Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 33/89 (37%), Positives = 38/89 (42%)
Query: 55 TPGVWGVN-GAYTGAYNTGVNGLSNNGIQALNTYGDRGYG-AGGYTDANGFYHGNLGTKN 112
T +G+N G G N N G Q YG GYG GGY G+Y G +
Sbjct: 16 TAAQFGLNSGLGLGVGPARANANLNGGFQ--RGYGGNGYGNRGGYGQQGGYY----GQQG 69
Query: 113 GYDVGHAYGGGKDIGLTNVQGGSYGDVRG 141
GY YGG + G QGG YG RG
Sbjct: 70 GYGQQGGYGGNQ--GYYGQQGGGYGGGRG 96
>UNIPROTKB|E9PSU5 [details] [associations]
symbol:E9PSU5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00364363 PRIDE:E9PSU5
Ensembl:ENSRNOT00000022054 Uniprot:E9PSU5
Length = 363
Score = 129 (50.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 45/133 (33%), Positives = 58/133 (43%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNG--IQALNTYGDRG-YGAGG--YTDANGFYHGNLGTK 111
G G G+Y G + G NG +G Y RG YG GG Y + G Y G G
Sbjct: 236 GGGGSRGSYGGG-DGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGAGGY 294
Query: 112 NGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKA-TYYDDG 170
+GY+ G +GGG G GG+Y D G G Q + + G + + Y G
Sbjct: 295 DGYNEGGNFGGGNYGG-----GGNYNDF-GNYSGQQQSNYGPMKGGSFGGRSSGSPYGGG 348
Query: 171 LGHG-GSIQYGSK 182
G G GS YGS+
Sbjct: 349 YGSGSGSGGYGSR 361
Score = 112 (44.5 bits), Expect = 0.00080, P = 0.00080
Identities = 50/151 (33%), Positives = 57/151 (37%)
Query: 54 NTPGVWGVNGAYTGAYNTGVN--GLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTK 111
N G G G G + G N G G + G G G GGY G GN G
Sbjct: 206 NFMGHGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGD-GGNYGGG 264
Query: 112 NGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGL 171
GY YGGG G N QGG YG G G+ G N GN Y+D
Sbjct: 265 PGYSSRGGYGGGGP-GYGN-QGGGYGGGAGGYDGYNEGGNFGGGNYGGGGN----YNDFG 318
Query: 172 GHGGSIQ--YGSKDHRSRDG--VGNAFGGAY 198
+ G Q YG S G G+ +GG Y
Sbjct: 319 NYSGQQQSNYGPMKGGSFGGRSSGSPYGGGY 349
>MGI|MGI:2157572 [details] [associations]
symbol:Krtap19-2 "keratin associated protein 19-2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2157572 GO:GO:0005882
GeneTree:ENSGT00700000104025 CTD:100505753 InterPro:IPR021743
Pfam:PF11759 EMBL:AF345291 EMBL:BC115787 EMBL:BC115815
EMBL:AK137740 IPI:IPI00126911 RefSeq:NP_570940.1 UniGene:Mm.196827
HSSP:P10968 PRIDE:Q925I0 Ensembl:ENSMUST00000076186 GeneID:170651
KEGG:mmu:170651 UCSC:uc007zvi.1 OMA:PAYWPAY NextBio:370161
Bgee:Q925I0 Genevestigator:Q925I0 Uniprot:Q925I0
Length = 141
Score = 107 (42.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/145 (31%), Positives = 57/145 (39%)
Query: 60 GVNGAYTGAYNTGVNGLSN--NGIQALNT---YGDRGYGAGGYTDANGFYHGNLGTKNGY 114
G +G Y + GL N I+ L YG GYG+G Y GF +G+ G GY
Sbjct: 6 GYSGGLGYGYGSSFGGLGCGCNSIRRLGCGSGYGGFGYGSG-YGGFGGFGYGS-GY-GGY 62
Query: 115 DVGHAYGGGKDIGLTNVQGG-SYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGH 173
G YGG G + GG YG G G G+ + Y + G+ Y G G
Sbjct: 63 GYGSGYGGFGGFGYGSGYGGFGYGSGYGGFGGF---GYGSGYGGYGYGSGFGGYGYGSGF 119
Query: 174 GGSIQYGSKDHRSRDGVGNAFGGAY 198
G YG RS G F Y
Sbjct: 120 RG---YGCGCRRSSCCGGYGFSSFY 141
>MGI|MGI:96696 [details] [associations]
symbol:Krt9 "keratin 9" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=ISO;IMP] [GO:0043588 "skin development"
evidence=ISO] [GO:0045095 "keratin filament" evidence=ISO]
[GO:0045109 "intermediate filament organization" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248 MGI:MGI:96696
GO:GO:0048471 GO:GO:0043588 GO:GO:0005198 GO:GO:0007283
GO:GO:0045109 HOVERGEN:HBG013015 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
eggNOG:NOG148410 KO:K07604 EMBL:AL590873
GeneTree:ENSGT00560000076905 CTD:3857 OrthoDB:EOG4BCDNC
EMBL:AY497550 IPI:IPI00399610 RefSeq:NP_957707.2 UniGene:Mm.445335
ProteinModelPortal:Q6RHW0 SMR:Q6RHW0 PhosphoSite:Q6RHW0
PRIDE:Q6RHW0 DNASU:107656 Ensembl:ENSMUST00000059707 GeneID:107656
KEGG:mmu:107656 UCSC:uc007lkn.1 InParanoid:Q6RHW0 NextBio:359198
Bgee:Q6RHW0 CleanEx:MM_KRT9 Genevestigator:Q6RHW0 Uniprot:Q6RHW0
Length = 743
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 47/147 (31%), Positives = 62/147 (42%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHA 119
G G++ G G G S++G + +YG G+ G + G Y G G +G G
Sbjct: 542 GSGGSHGGKSGGGYGGGSSSGGGSGGSYGGGSGGSHG-GGSGGSYGGGSGGSHGGKSGGG 600
Query: 120 YGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLG--HGGSI 177
YGGG G GGSYG G + G + G SY G+ Y G G HGG
Sbjct: 601 YGGGTSSG--GGSGGSYGGGSGGSHGGKSGG---SYGGGSGGS----YGGGSGGSHGGKS 651
Query: 178 Q--YGSKDHRSRDGVGNAFGGAYHDAH 202
YG S G G ++GG +H
Sbjct: 652 GGGYGGGSS-SGGGSGGSYGGGSGGSH 677
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 45/152 (29%), Positives = 63/152 (41%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGG-YTDANGFYHGNL-------GTK 111
G +G G + G +G + G + G G G+GG Y +G HG G+
Sbjct: 501 GGSGGSHGGKSGGSHGGGSGGSYGGESGGSHGGGSGGSYGGGSGGSHGGKSGGGYGGGSS 560
Query: 112 NGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGL 171
+G G +YGGG GGSYG G + G + G G+ +Y G
Sbjct: 561 SGGGSGGSYGGGSGGSHGGGSGGSYGGGSGGSHGGKSGGGYGGGTSSGGGSGGSY---GG 617
Query: 172 GHGGSIQYGSKDHRSRDG-VGNAFGGAYHDAH 202
G GGS +G K S G G ++GG +H
Sbjct: 618 GSGGS--HGGKSGGSYGGGSGGSYGGGSGGSH 647
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 44/144 (30%), Positives = 55/144 (38%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGG-YTDANGFYHGNL-GTKNGYDVG 117
G G+Y G + G G + G + G G G+GG Y +G HG G +G G
Sbjct: 462 GSGGSYGGG-SGGSYGGGSGGSYGGGSGGSYGGGSGGSYGGGSGGSHGGKSGGSHGGGSG 520
Query: 118 HAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLG--HGG 175
+YGG GGSYG G + G + G G Y G G HGG
Sbjct: 521 GSYGGESGGSHGGGSGGSYGGGSGGSHGGKSGG-GYGGGSSSGGGSGGSYGGGSGGSHGG 579
Query: 176 SI--QYGSKDHRSRDGV-GNAFGG 196
YG S G G +GG
Sbjct: 580 GSGGSYGGGSGGSHGGKSGGGYGG 603
>RGD|628785 [details] [associations]
symbol:Krt9 "keratin 9" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005200 "structural constituent of cytoskeleton" evidence=NAS]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO;IDA] [GO:0043588 "skin
development" evidence=IEA;ISO;ISS] [GO:0045095 "keratin filament"
evidence=IDA] [GO:0045109 "intermediate filament organization"
evidence=IEA;ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
RGD:628785 GO:GO:0048471 GO:GO:0043588 GO:GO:0005200 GO:GO:0007283
GO:GO:0045109 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
HOGENOM:HOG000230975 GO:GO:0045095 HSSP:P08670 eggNOG:NOG148410
KO:K07604 CTD:3857 OrthoDB:EOG4BCDNC EMBL:AY128946 IPI:IPI00194129
RefSeq:NP_703206.1 UniGene:Rn.145135 ProteinModelPortal:Q8CIS9
STRING:Q8CIS9 PRIDE:Q8CIS9 GeneID:266717 KEGG:rno:266717
UCSC:RGD:628785 InParanoid:Q8CIS9 NextBio:624558
Genevestigator:Q8CIS9 Uniprot:Q8CIS9
Length = 618
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/128 (35%), Positives = 57/128 (44%)
Query: 63 GAYTGAYNTGVNGLSNNGIQALNTYG---DRGYGAGG-YTDANGFYHGNL-GTKNGYDVG 117
G G+Y G G S+ G ++ +YG G G+GG Y +G HG G +G G
Sbjct: 484 GESGGSYGGGSGG-SHGG-KSGGSYGGGSSSGGGSGGSYGGGSGGSHGGKSGGSHGGGSG 541
Query: 118 HAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSI 177
+YGGG G GGSYG G + G Q G SY G+ G G GGS
Sbjct: 542 GSYGGGSGSG--GESGGSYGGGSGGSHGGQKGGSGGSYEGGSGGSYGGGSGSGGGSGGS- 598
Query: 178 QYGSKDHR 185
YG + R
Sbjct: 599 -YGGGNTR 605
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 42/139 (30%), Positives = 56/139 (40%)
Query: 62 NGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYG 121
+GA + +G G +G +YG G G ++ G Y G G +G G +YG
Sbjct: 453 SGAGQIGFGSGKGGQRGSG----GSYGG-GSGDSYEGESGGSYGGGSGGSHGGKSGGSYG 507
Query: 122 GGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSI--QY 179
GG G GGSYG G + G + G H G+ +Y G G GG Y
Sbjct: 508 GGSSSG--GGSGGSYGGGSGGSHGGKSGG------SHGGGSGGSY-GGGSGSGGESGGSY 558
Query: 180 GSKDHRSRDGVGNAFGGAY 198
G S G GG+Y
Sbjct: 559 GGGSGGSHGGQKGGSGGSY 577
>UNIPROTKB|E2RFV7 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 GeneTree:ENSGT00700000104376 CTD:220988 OMA:QGHDPKE
EMBL:AAEX03017802 RefSeq:XP_543761.2 ProteinModelPortal:E2RFV7
Ensembl:ENSCAFT00000021410 GeneID:608074 KEGG:cfa:608074
Uniprot:E2RFV7
Length = 378
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/133 (33%), Positives = 58/133 (43%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNG--IQALNTYGDRG-YGAGG--YTDANGFYHGNLGTK 111
G G G+Y G + G NG +G Y RG YG GG Y + G Y G G
Sbjct: 251 GGGGSRGSYGGG-DGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGY 309
Query: 112 NGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKA-TYYDDG 170
+GY+ G +GGG G GG+Y D G G Q + + G + + Y G
Sbjct: 310 DGYNEGGNFGGGNYGG-----GGNYNDF-GNYSGQQQSNYGPMKGGSFGGRSSGSPYGGG 363
Query: 171 LGHGG-SIQYGSK 182
G GG S YGS+
Sbjct: 364 YGSGGGSGGYGSR 376
Score = 112 (44.5 bits), Expect = 0.00086, P = 0.00086
Identities = 49/146 (33%), Positives = 55/146 (37%)
Query: 60 GVNGAYTGAYNTGVNG-LSNNGIQALNTYGDRGYGAGGYTDANGFYH--GNLGTKNGYDV 116
G G + G N G G G G RG GG NGF GN G GY
Sbjct: 225 GRGGNFGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSS 284
Query: 117 GHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
YGGG G N QGG YG G G+ G N GN Y+D + G
Sbjct: 285 RGGYGGGGP-GYGN-QGGGYGGGGGGYDGYNEGGNFGGGNYGGGGN----YNDFGNYSGQ 338
Query: 177 IQ--YGSKDHRSRDG--VGNAFGGAY 198
Q YG S G G+ +GG Y
Sbjct: 339 QQSNYGPMKGGSFGGRSSGSPYGGGY 364
>UNIPROTKB|F2Z5B4 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013 KO:K12741
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:CU862048
RefSeq:XP_003133549.1 ProteinModelPortal:F2Z5B4 SMR:F2Z5B4
Ensembl:ENSSSCT00000017409 GeneID:100516520 KEGG:ssc:100516520
Uniprot:F2Z5B4
Length = 379
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/133 (33%), Positives = 58/133 (43%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNG--IQALNTYGDRG-YGAGG--YTDANGFYHGNLGTK 111
G G G+Y G + G NG +G Y RG YG GG Y + G Y G G
Sbjct: 252 GGGGSRGSYGGG-DGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGY 310
Query: 112 NGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKA-TYYDDG 170
+GY+ G +GGG G GG+Y D G G Q + + G + + Y G
Sbjct: 311 DGYNEGGNFGGGNYGG-----GGNYNDF-GNYSGQQQSNYGPMKGGSFGGRSSGSPYGGG 364
Query: 171 LGHGG-SIQYGSK 182
G GG S YGS+
Sbjct: 365 YGSGGGSGGYGSR 377
>RGD|727807 [details] [associations]
symbol:Hnrnpa3 "heterogeneous nuclear ribonucleoprotein A3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0035770
"ribonucleoprotein granule" evidence=IDA] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IMP] [GO:0051033 "RNA transmembrane transporter activity"
evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:727807 GO:GO:0005634
GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043005 GO:GO:0005681
GO:GO:0051028 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF CTD:220988
EMBL:AY363226 EMBL:AY363227 EMBL:BC081878 IPI:IPI00382376
IPI:IPI00464458 RefSeq:NP_001104764.1 RefSeq:NP_001104765.1
RefSeq:NP_937765.1 UniGene:Rn.107690 UniGene:Rn.99947
ProteinModelPortal:Q6URK4 SMR:Q6URK4 STRING:Q6URK4
PhosphoSite:Q6URK4 PRIDE:Q6URK4 GeneID:362152 KEGG:rno:362152
UCSC:RGD:727807 InParanoid:Q6URK4 NextBio:678824
ArrayExpress:Q6URK4 Genevestigator:Q6URK4 GO:GO:0035770
GO:GO:0051033 Uniprot:Q6URK4
Length = 379
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/133 (33%), Positives = 58/133 (43%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNG--IQALNTYGDRG-YGAGG--YTDANGFYHGNLGTK 111
G G G+Y G + G NG +G Y RG YG GG Y + G Y G G
Sbjct: 252 GGGGSRGSYGGG-DGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGY 310
Query: 112 NGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKA-TYYDDG 170
+GY+ G +GGG G GG+Y D G G Q + + G + + Y G
Sbjct: 311 DGYNEGGNFGGGNYGG-----GGNYNDF-GNYSGQQQSNYGPMKGGSFGGRSSGSPYGGG 364
Query: 171 LGHGG-SIQYGSK 182
G GG S YGS+
Sbjct: 365 YGSGGGSGGYGSR 377
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 42/143 (29%), Positives = 57/143 (39%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHA 119
G G + G G G +G N G G G GGY G +G G GY G
Sbjct: 1242 GGGGGFGGGRGGGGGGFGGSGGFG-NGGGGYGVGGGGYGGGGGGGYG--GGSGGYG-GGG 1297
Query: 120 YGGGKDIGLT-NVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQ 178
YGGG+ ++ N G+YG G RG G+ ++ G+ Y G G+ GS
Sbjct: 1298 YGGGEGYSISPNSYRGNYGGGGGGYRGGSQGGYRNNFGGDYRGSSGDYRGSGGGYRGSGG 1357
Query: 179 YGSKDHRSR---DGVGNAFGGAY 198
+ + + G G GG Y
Sbjct: 1358 FQRRGYGGGYFGQGRGGGGGGGY 1380
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 44/127 (34%), Positives = 49/127 (38%)
Query: 54 NTPGVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAG-GYTDANGFYHGNLGTKN 112
N G +GV G G Y G G G YG GYG G GY+ + Y GN G
Sbjct: 1266 NGGGGYGVGG---GGYGGGGGGGYGGGSGG---YGGGGYGGGEGYSISPNSYRGNYG--G 1317
Query: 113 GYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLG 172
G G Y GG G N GG Y G RG G+ S G Y+ G G
Sbjct: 1318 G---GGGYRGGSQGGYRNNFGGDYRGSSGDYRGSG-GGYRGSGGFQRRGYGGGYFGQGRG 1373
Query: 173 HGGSIQY 179
GG Y
Sbjct: 1374 GGGGGGY 1380
>TAIR|locus:2119916 [details] [associations]
symbol:AT4G29030 "AT4G29030" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] EMBL:CP002687 EMBL:AL078470
EMBL:AL161574 UniGene:At.3405 EMBL:AY086224 IPI:IPI00521048
PIR:T08958 RefSeq:NP_194632.1 STRING:Q9SZD3
EnsemblPlants:AT4G29030.1 GeneID:829024 KEGG:ath:AT4G29030
TAIR:At4g29030 OMA:LACGARN ProtClustDB:CLSN2916034
Genevestigator:Q9SZD3 Uniprot:Q9SZD3
Length = 115
Score = 104 (41.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/94 (37%), Positives = 40/94 (42%)
Query: 47 PVGPPLINTPGVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRG-YGAGGYTDANGFYH 105
PVG L + G G Y+G G NGL G+ G G G GG+ A G
Sbjct: 26 PVG--LSDQKNYLGYGGGYSGV---GDNGLPFGGVGG-GVSGPGGNLGYGGFGGAGGGLG 79
Query: 106 GNLGTKNGYDVGHAYGGGKDIGLTNVQGGSYGDV 139
G LG G +G GGG IG GGS G V
Sbjct: 80 GGLGGGAGSGLGGGLGGGSGIG-AGTSGGSTGGV 112
>FB|FBgn0263396 [details] [associations]
symbol:sqd "squid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0008069 "dorsal/ventral axis specification, ovarian follicular
epithelium" evidence=IMP] [GO:0007297 "ovarian follicle cell
migration" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP;TAS]
[GO:0008298 "intracellular mRNA localization" evidence=NAS;TAS]
[GO:0017148 "negative regulation of translation" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0009953
"dorsal/ventral pattern formation" evidence=IMP;TAS] [GO:0006405
"RNA export from nucleus" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS] [GO:0003729 "mRNA
binding" evidence=ISS;NAS] [GO:0035062 "omega speckle"
evidence=IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0019094 "pole plasm mRNA localization"
evidence=IMP] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0016325 "oocyte microtubule cytoskeleton organization"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0007314 "oocyte anterior/posterior axis
specification" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IEP] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0033119 "negative regulation of RNA splicing"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0000785 GO:GO:0003730 GO:GO:0006406 GO:GO:0033119
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0030720
GO:GO:0007297 eggNOG:COG0724 GO:GO:0045451 GO:GO:0005703
GO:GO:0000381 GO:GO:0016325 GO:GO:0008069
GeneTree:ENSGT00700000104255 GO:GO:0035062 EMBL:X62637 EMBL:X62638
EMBL:S61875 EMBL:S62100 EMBL:AY118501 EMBL:BT001384 EMBL:BT003283
EMBL:BT023832 EMBL:S51693 PIR:A47369 PIR:B41732 PIR:B47369
PIR:C48110 RefSeq:NP_001247088.1 RefSeq:NP_652209.1
RefSeq:NP_731825.1 RefSeq:NP_731826.1 RefSeq:NP_996203.1
UniGene:Dm.7189 ProteinModelPortal:Q08473 SMR:Q08473 IntAct:Q08473
MINT:MINT-847475 STRING:Q08473 PaxDb:Q08473
EnsemblMetazoa:FBtr0082855 GeneID:41666 KEGG:dme:Dmel_CG16901
CTD:41666 FlyBase:FBgn0263396 InParanoid:Q08473 KO:K03102
OMA:GDIDSIN OrthoDB:EOG43BK52 PhylomeDB:Q08473 ChiTaRS:sqd
GenomeRNAi:41666 NextBio:824926 Bgee:Q08473 GermOnline:CG16901
Uniprot:Q08473
Length = 344
Score = 123 (48.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/94 (41%), Positives = 47/94 (50%)
Query: 57 GVWGVNGAY--TGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTD--ANGFYHGNLGTKN 112
G+ G G Y G YN +G + G YG GYGAGGY D A G+Y+G
Sbjct: 230 GMRGGRGGYGGRGGYNNQWDGQGSYGGYG-GGYG--GYGAGGYGDYYAGGYYNGY---DY 283
Query: 113 GYDVGHAYGGG-KDIGLTNVQGGSYGDVRGRNRG 145
GYD G+ YGGG + G GG+ G RG RG
Sbjct: 284 GYD-GYGYGGGFEGNGYGGGGGGNMGGGRGGPRG 316
>UNIPROTKB|F1Q3G7 [details] [associations]
symbol:HNRNPA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013
GO:GO:0051168 GO:GO:0000380 GO:GO:0051170
GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
Ensembl:ENSCAFT00000010627 OMA:QAQQGGW Uniprot:F1Q3G7
Length = 384
Score = 123 (48.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 45/128 (35%), Positives = 57/128 (44%)
Query: 63 GAYTGAYNTGVNGLSNNGIQALNT--Y--GDRGYGAGGYTDAN-GFYHGNLGTKNGYDVG 117
G Y G+ G NG N+G Y G RGYG+GG N G +G G+ + Y+ G
Sbjct: 256 GGYGGS-GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNG 314
Query: 118 HAYGG-GKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
GG G G GGSY D G N +Q + F + G + Y G G+GGS
Sbjct: 315 GGGGGYGGGSGSNFGGGGSYNDF-G-NYNNQSSNFGPMKGGNFGGRSSGPYGGGGGYGGS 372
Query: 177 IQ---YGS 181
YGS
Sbjct: 373 SSSSSYGS 380
>UNIPROTKB|F1Q3U2 [details] [associations]
symbol:KRT76 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
OMA:PNNLEPF GeneTree:ENSGT00610000085801 EMBL:AAEX03015004
Ensembl:ENSCAFT00000039433 Uniprot:F1Q3U2
Length = 644
Score = 100 (40.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 106 GNLGTKNGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKAT 165
G+ G++ G+ G + GG + + G YG VRG + G +G S Y SG
Sbjct: 527 GSGGSRGGFSGGSS-GGYRGGSTSRGSSGGYGGVRGSSSGGYQSGSSGGYQSGSSGG--- 582
Query: 166 YYDDGLGHGGSIQYGSKDHRSRDGVGNAFGG 196
Y G G + G S+ G+G++ GG
Sbjct: 583 -YQSG-SSGNRLSSGGSSSVSQSGIGSSSGG 611
Score = 69 (29.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 31/120 (25%), Positives = 44/120 (36%)
Query: 2 FGRPSKVSTSQNKSLHLTGIGLAVQAFYIN--LTLDTVMGGEYAELQPVGPPLINTPGVW 59
FG S S NKS+ ++ G + + + +V GG Y G + G
Sbjct: 52 FGSRSLYSLGGNKSISISVAGGSRAGGFGGGRSSSGSVFGGGYGGGFGGGRGIGGGFGGA 111
Query: 60 GVNGAYTGAYNTGVNGLSN-NGIQALNTYGDRG-YGAGGYTDANGFYHGNLGTKNGYDVG 117
G G G + G G G +G G +G GG+ GF G G G+ G
Sbjct: 112 GGFGGGAGGFGGGAGGFGGAGGFGGPRGFGGPGGFGPGGFGGPGGFGPGGFGGPGGFPGG 171
>TAIR|locus:2159401 [details] [associations]
symbol:GR-RBP3 "glycine-rich RNA-binding protein 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005507
"copper ion binding" evidence=IDA] [GO:0006626 "protein targeting
to mitochondrion" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005507 EMBL:AB006696 eggNOG:COG0724
HSSP:Q14103 KO:K12741 EMBL:AY060565 EMBL:AY125548 EMBL:AB493804
IPI:IPI00542729 RefSeq:NP_200911.1 UniGene:At.24064
ProteinModelPortal:Q9FNR1 SMR:Q9FNR1 STRING:Q9FNR1 PaxDb:Q9FNR1
PRIDE:Q9FNR1 EnsemblPlants:AT5G61030.1 GeneID:836224
KEGG:ath:AT5G61030 GeneFarm:3953 TAIR:At5g61030
HOGENOM:HOG000029199 InParanoid:Q9FNR1 OMA:YANDRTS
ProtClustDB:CLSN2916423 Genevestigator:Q9FNR1 Uniprot:Q9FNR1
Length = 309
Score = 120 (47.3 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 49/160 (30%), Positives = 61/160 (38%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGI--QALNTYGDRGYGAGGYT-DANGF--YHGNLGTK 111
G +G +G Y G G G S G A YG G GAGGY DA G G G+
Sbjct: 148 GGYGGSGGYGGGAG-GYGGNSGGGYGGNAAGGYG--GSGAGGYGGDATGHGGAGGGYGSS 204
Query: 112 NGY-DVGHAYGGGKD-----IGLTNVQGG-----SYGDVRGRNRGHQVAGFSTSYNKHES 160
G+ G+ YG G +G N G +YG G G G S N +
Sbjct: 205 GGFGSSGNTYGEGSSASAGAVGDYNGSSGYGSANTYGSSNGGFAGDSQFGGSPVGNSSQF 264
Query: 161 GNKATYYDDGLGHGGSIQYGSKDHRSRDGVGNAFGGAYHD 200
G T + G GG Q+GS + GG + D
Sbjct: 265 GGDNTQFTAGGQFGGEDQFGSMEKSETKMEDGPIGGEFED 304
>ZFIN|ZDB-GENE-040426-1546 [details] [associations]
symbol:zgc:66127 "zgc:66127" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-1546 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00700000104376 EMBL:CABZ01055593
EMBL:CABZ01000532 EMBL:CABZ01000533 EMBL:CABZ01000534
EMBL:CABZ01000536 EMBL:CABZ01000539 EMBL:CABZ01000540
EMBL:CABZ01085064 EMBL:CABZ01085065 EMBL:CABZ01085066
EMBL:CABZ01085067 EMBL:CABZ01085068 EMBL:CABZ01088246
EMBL:CABZ01088247 EMBL:CABZ01088248 EMBL:CABZ01088249
EMBL:CABZ01088250 EMBL:CABZ01088251 EMBL:CABZ01092715
EMBL:CABZ01092716 EMBL:CABZ01092717 EMBL:CABZ01092718
IPI:IPI00971841 Ensembl:ENSDART00000082448 Bgee:E7FAB3
Uniprot:E7FAB3
Length = 411
Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 52/149 (34%), Positives = 59/149 (39%)
Query: 57 GVWGVNGAYTGAY-NTGVN-GL-SNNGIQALNTYGDRG--YGAGGYTDANGFYHGNLGTK 111
G G NG Y G N G N G S G YG++G YG GGY + N +G G
Sbjct: 268 GYGGGNGGYGGGGPNYGGNRGYGSGGGGGGGGGYGNQGGGYGGGGYDNYNN--NGGGGGG 325
Query: 112 NGYDVGHAYGGG---KDIGLTNVQGGS-YGDVRGRNRGHQVAGFSTSYNKHESGNKATYY 167
G G +GGG D G N Q S YG ++G N G G S G Y
Sbjct: 326 GGNFGGGNFGGGGDYNDFGNYNNQSSSNYGPMKGGNYGGGGGGGGRSGGGPYGGG----Y 381
Query: 168 DDGLGHGGSIQYGSKDHRSRDGVGNAFGG 196
G G GG YG G G GG
Sbjct: 382 GGGSGGGGG--YGGGSGGGGGGYGGGSGG 408
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 49/146 (33%), Positives = 62/146 (42%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTK---NG 113
G +G Y G Y G G G N G+RGYG+GG G Y GN G G
Sbjct: 258 GGYGGGDGYNG-YGGGNGGYGGGGP---NYGGNRGYGSGGGGGGGGGY-GNQGGGYGGGG 312
Query: 114 YDVGHAYGGGKDIGLTNVQGGSYGDVRGRNR-GHQVAGFSTSYNKHESGNKATYYDDGLG 172
YD + GGG G N GG++G N G+ S++Y + GN Y G G
Sbjct: 313 YDNYNNNGGGGGGG-GNFGGGNFGGGGDYNDFGNYNNQSSSNYGPMKGGN----YGGGGG 367
Query: 173 HGGSIQYGSKDHRSRDGVGNAFGGAY 198
GG + G + G G+ GG Y
Sbjct: 368 GGG--RSGGGPYGGGYGGGSGGGGGY 391
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 44/151 (29%), Positives = 60/151 (39%)
Query: 53 INTPGVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGY--GAGGYTDANGFYHGNLGT 110
+N+ G G G +G N G G G YG G G GGY +G Y+G G
Sbjct: 215 MNSRGGRGGGGG-SGGGNFGRGGGGGGGGGYGGGYGGGGGRGGGGGYGGGDG-YNGYGGG 272
Query: 111 KNGYDVGHA-YGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDD 169
GY G YGG + G + GG G + G+ G+ N G +
Sbjct: 273 NGGYGGGGPNYGGNRGYG-SGGGGGGGGGYGNQGGGYGGGGYDNYNNNGGGGGGGGNFGG 331
Query: 170 G-LGHGGSIQ-YGSKDHRSRDGVGNAFGGAY 198
G G GG +G+ +++S G GG Y
Sbjct: 332 GNFGGGGDYNDFGNYNNQSSSNYGPMKGGNY 362
>UNIPROTKB|E2RBV8 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0032496 GO:GO:0006954 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0070935 GeneTree:ENSGT00700000104255 CTD:10949
KO:K12894 OMA:GPMKQNL EMBL:AAEX03007810 RefSeq:XP_538645.2
ProteinModelPortal:E2RBV8 Ensembl:ENSCAFT00000001730 GeneID:481524
KEGG:cfa:481524 NextBio:20856300 Uniprot:E2RBV8
Length = 310
Score = 120 (47.3 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 41/116 (35%), Positives = 50/116 (43%)
Query: 88 GDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYGGGKDIGLT-NVQGGSYG--DVRGRNR 144
G G G GG D NG G G GY+ YGGG G N GG G G +
Sbjct: 194 GRGGRGRGGGRDQNGLSKGGGGGGGGYNSYGGYGGGGGGGGGYNAYGGGGGGSSYGGSDY 253
Query: 145 GHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQYG---SKDHRSRDGVGNAFGGA 197
G+ GF SY++H+S G G GGS G S +R G G +GG+
Sbjct: 254 GNGFGGFG-SYSQHQSSYGPMKGGGGGGGGGSSWGGRSNSGPYRGGYGGGGGYGGS 308
>TAIR|locus:2058964 [details] [associations]
symbol:AT2G05510 "AT2G05510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002685
GenomeReviews:CT485783_GR UniGene:At.24946 UniGene:At.21811
InterPro:IPR010800 Pfam:PF07172 EMBL:AC006220 UniGene:At.47268
EMBL:BT006193 EMBL:AK228184 IPI:IPI00519837 PIR:D84469
RefSeq:NP_178619.1 UniGene:At.48425 EnsemblPlants:AT2G05510.1
GeneID:815100 KEGG:ath:AT2G05510 TAIR:At2g05510
HOGENOM:HOG000064694 OMA:NDEPVQT ProtClustDB:CLSN2912931
Genevestigator:Q9SL16 Uniprot:Q9SL16
Length = 127
Score = 100 (40.3 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 29/82 (35%), Positives = 35/82 (42%)
Query: 113 GYDVGHA-YGGGKDIGLTNVQGGSYGDVRGRNRG--HQVAGFSTSYNKHESGNKATYYDD 169
GY GH +GGG G GG +G G N G H + G+ + H G +Y
Sbjct: 42 GYHGGHGGHGGGGHYG-----GGGHGH-GGHNGGGGHGLDGYGGGHGGHYGGGGG-HYGG 94
Query: 170 GLGHGGSIQYGSKDHRSRDGVG 191
G GHGG YG H G G
Sbjct: 95 GGGHGGGGHYGGGGHHGGGGHG 116
>UNIPROTKB|Q13151 [details] [associations]
symbol:HNRNPA0 "Heterogeneous nuclear ribonucleoprotein A0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=ISS;TAS] [GO:0006954
"inflammatory response" evidence=ISS] [GO:0032496 "response to
lipopolysaccharide" evidence=ISS] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 EMBL:CH471062 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0017091
GO:GO:0030529 GO:GO:0000398 eggNOG:COG0724 GO:GO:0070935
HOVERGEN:HBG002295 HOGENOM:HOG000234442 EMBL:U23803 EMBL:CR456986
EMBL:BC001008 EMBL:BC007271 EMBL:BC009284 EMBL:BC011972
EMBL:BC012980 EMBL:BC018949 EMBL:BC019271 EMBL:BC028976
EMBL:BC030249 IPI:IPI00011913 RefSeq:NP_006796.1 UniGene:Hs.645902
UniGene:Hs.96996 ProteinModelPortal:Q13151 SMR:Q13151 IntAct:Q13151
MINT:MINT-5001237 STRING:Q13151 PhosphoSite:Q13151 DMDM:8134660
REPRODUCTION-2DPAGE:Q13151 SWISS-2DPAGE:Q13151 PaxDb:Q13151
PeptideAtlas:Q13151 PRIDE:Q13151 DNASU:10949
Ensembl:ENST00000314940 GeneID:10949 KEGG:hsa:10949 UCSC:uc003lbt.3
CTD:10949 GeneCards:GC05M137114 HGNC:HGNC:5030 HPA:HPA036569
MIM:609409 neXtProt:NX_Q13151 PharmGKB:PA162391106
InParanoid:Q13151 KO:K12894 OMA:GPMKQNL OrthoDB:EOG4W6NX4
PhylomeDB:Q13151 GenomeRNAi:10949 NextBio:41601 Bgee:Q13151
CleanEx:HS_HNRNPA0 Genevestigator:Q13151 GermOnline:ENSG00000177733
Uniprot:Q13151
Length = 305
Score = 119 (46.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 40/114 (35%), Positives = 48/114 (42%)
Query: 88 GDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYGGGKDIGLTNVQGGSYGD-VRGRNRGH 146
G G G GG D NG G G N Y YGGG G GG G G + G+
Sbjct: 194 GRGGRGRGGGRDQNGLSKGGGGGYNSYG---GYGGGGGGGYNAYGGGGGGSSYGGSDYGN 250
Query: 147 QVAGFSTSYNKHESGNKATYYDDGLGHGGSIQYG---SKDHRSRDGVGNAFGGA 197
GF SY++H+S G G GGS G S +R G G +GG+
Sbjct: 251 GFGGFG-SYSQHQSSYGPMKSGGGGGGGGSSWGGRSNSGPYRGGYGGGGGYGGS 303
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 36/104 (34%), Positives = 47/104 (45%)
Query: 74 NGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTK-NGYDVGHAYGGGKDIGLTNVQ 132
NGLS G N+YG GYG GG N + G G+ G D G+ +GG G +
Sbjct: 207 NGLSKGGGGGYNSYG--GYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGG---FGSYSQH 261
Query: 133 GGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
SYG ++ G G S+ + SG Y G G+GGS
Sbjct: 262 QSSYGPMKSGGGGG--GGGSSWGGRSNSGPYRGGYGGGGGYGGS 303
>RGD|1563684 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=ISO]
[GO:0017091 "AU-rich element binding" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0032496 "response to
lipopolysaccharide" evidence=ISO] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
REFSEQ:XM_003752953 Ncbi:XP_003753001
Length = 226
Score = 116 (45.9 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 42/112 (37%), Positives = 48/112 (42%)
Query: 91 GYGAGGYTDANGFYHGNLGTKNGYDV--GH-AYGGGKDIGLTNVQGGSYGDVRGRNRGHQ 147
G G GG D NG G G N Y G+ AYGGG GGSYG G + G+
Sbjct: 121 GGGGGGGRDQNGLAKGGGGGYNSYGGYGGYGAYGGGGG-------GGSYG---GSDYGNG 170
Query: 148 VAGFSTSYNKHESGNKATYYDDGLGHGGSIQYG-SKDHRSRDGVGNAFGGAY 198
GF SY++H+S G G GG Y S R G G GG Y
Sbjct: 171 FGGFG-SYSQHQSSYGPMKSGGGGGGGGGRLYDRSNSGPYRGGYGGDGGGGY 221
>UNIPROTKB|G3N220 [details] [associations]
symbol:G3N220 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00700000104376 EMBL:DAAA02027300
Ensembl:ENSBTAT00000063435 OMA:GWEDRSH Uniprot:G3N220
Length = 310
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 50/152 (32%), Positives = 59/152 (38%)
Query: 54 NTPGVWGVNGAYTGAYNTGVN--GLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTK 111
N G G G G + G N G G + G G G GGY G GN G
Sbjct: 153 NFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGG-GGNYGGG 211
Query: 112 NGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAG-FSTSY----NKHESGNKATY 166
GY YGGG G N QGG YG G G+ G F +Y N ++ GN +
Sbjct: 212 PGYSSRGGYGGGGPGGYGN-QGGGYGGGGGGYDGYNEGGNFGGNYGGGGNYNDFGNYSGQ 270
Query: 167 YDDGLG--HGGSIQYGSKDHRSRDGVGNAFGG 196
G GGS +G + S G G GG
Sbjct: 271 QQSNYGPMKGGS--FGGRSSGSPYGGGYGSGG 300
Score = 114 (45.2 bits), Expect = 0.00035, P = 0.00035
Identities = 40/124 (32%), Positives = 51/124 (41%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHA 119
G +G Y G G N G + YG G G GGY + G Y G G +GY+ G
Sbjct: 193 GGDGGYNGFGGGGGNYGGGPGYSSRGGYG--GGGPGGYGNQGGGYGGGGGGYDGYNEGGN 250
Query: 120 YGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGG-SIQ 178
+GG G G+Y + N G G S+ SG+ Y G G GG S
Sbjct: 251 FGGNYGGGGNYNDFGNYSGQQQSNYGPMKGG---SFGGRSSGSP---YGGGYGSGGGSGG 304
Query: 179 YGSK 182
YG +
Sbjct: 305 YGRR 308
>UNIPROTKB|F1LNG4 [details] [associations]
symbol:Hnrnpa3 "Heterogeneous nuclear ribonucleoprotein A3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00567786 Ensembl:ENSRNOT00000050735 ArrayExpress:F1LNG4
Uniprot:F1LNG4
Length = 357
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 40/123 (32%), Positives = 54/123 (43%)
Query: 63 GAYTGAYNT-GVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYG 121
G G YN G +G + G ++ G G G GY + G Y G G +GY+ G +G
Sbjct: 239 GGGDGGYNGFGGDGGNYGGGSGSSSRGGYGGGGPGYGNQGGGYGGGGGGYDGYNEGGNFG 298
Query: 122 GGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKA-TYYDDGLGHGG-SIQY 179
GG G GG+Y D G G Q + + G + + Y G G GG S Y
Sbjct: 299 GGNYGG-----GGNYNDF-GNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGY 352
Query: 180 GSK 182
GS+
Sbjct: 353 GSR 355
>FB|FBgn0004554 [details] [associations]
symbol:Edg91 "Ecdysone-dependent gene 91" species:7227
"Drosophila melanogaster" [GO:0008011 "structural constituent of
pupal chitin-based cuticle" evidence=NAS] EMBL:AE014297
GO:GO:0042302 EMBL:M71250 EMBL:M71251 PIR:C49773 RefSeq:NP_524390.2
UniGene:Dm.2407 DIP:DIP-23842N IntAct:P27781 MINT:MINT-312484
STRING:P27781 EnsemblMetazoa:FBtr0083502 GeneID:42117
KEGG:dme:Dmel_CG7539 CTD:42117 FlyBase:FBgn0004554
GeneTree:ENSGT00700000104760 OMA:GGHYSQS GenomeRNAi:42117
NextBio:827239 Bgee:P27781 GermOnline:CG7539 Uniprot:P27781
Length = 159
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 42/118 (35%), Positives = 53/118 (44%)
Query: 63 GAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYGG 122
G Y G Y +G G G N YG G+G GGY G Y G G + + G+ Y G
Sbjct: 61 GGYPGGYASGYPGGYGGGYSGYNGYGGSGFG-GGYYPGGG-YSG-FGHRPHHHGGY-YPG 116
Query: 123 GKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQYG 180
G G + QGGSYG GH S +++ +G YY G G+GG YG
Sbjct: 117 G---GSYHNQGGSYG-------GHY------SQSQYSNG----YYGGG-GYGGG-GYG 152
>UNIPROTKB|F1NCI5 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:EDNQHAL EMBL:AADN02028465
IPI:IPI00573116 Ensembl:ENSGALT00000009947 Uniprot:F1NCI5
Length = 328
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 40/115 (34%), Positives = 51/115 (44%)
Query: 88 GDRGYGAGGY--TDANGFYHGNLGTKNGYDVGHAYGGGKDIGLTNVQGGSYGDVRGR-NR 144
G RG G GG D NG G GY+ YGGG G GGSYG G +
Sbjct: 217 GGRGRGGGGSGNRDHNGLSKGG----GGYNSYGGYGGGGGGGYGGYGGGSYGGGGGGGDY 272
Query: 145 GHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQYGSKDHRS--RDGVGNA-FGG 196
G+ GF SY++H+S + G G GG +G + + R G G +GG
Sbjct: 273 GNGYGGFG-SYSQHQS-SYGPMKSGGGGGGGGGNWGGRSNSGPYRGGYGGGGYGG 325
>TAIR|locus:1006230415 [details] [associations]
symbol:AT4G01985 "AT4G01985" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161493 IPI:IPI00528984
RefSeq:NP_974499.1 UniGene:At.44094 PaxDb:Q3EAC9 PRIDE:Q3EAC9
EnsemblPlants:AT4G01985.1 GeneID:2745601 KEGG:ath:AT4G01985
TAIR:At4g01985 eggNOG:NOG310993 OMA:NSAANID Genevestigator:Q3EAC9
Uniprot:Q3EAC9
Length = 579
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 49/145 (33%), Positives = 60/145 (41%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDV 116
G G +G +G + G +G ++ G A G G GAGG A G G +G G V
Sbjct: 384 GSGGASGGASGGASGGASGGASGG--ASGGVGGAG-GAGGSVGAGGGVGGGVGGGVGGGV 440
Query: 117 GHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
G A GG +G V GG G V G RG AG T + G G+G GG
Sbjct: 441 GGAVGGA--VGGA-VGGGGGGSVGGGGRGSGGAGGGTGGSVGAGGGV------GVGGGGG 491
Query: 177 IQYGSKDHRSRDGVGNAFGGAYHDA 201
I G+ GVG GG A
Sbjct: 492 IGGGAGGGVG-GGVGGGVGGGVRGA 515
>UNIPROTKB|F6RSR1 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:DAAA02020383
IPI:IPI00687625 Ensembl:ENSBTAT00000022514 Uniprot:F6RSR1
Length = 310
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 36/103 (34%), Positives = 47/103 (45%)
Query: 74 NGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYGGGKDIGLTNVQG 133
NGLS G N+YG G G GGY +A G G + G D G+ +GG G +
Sbjct: 212 NGLSKGGGGGYNSYGGYGGGGGGY-NAYGGGGGGGSSYGGSDYGNGFGG---FGSYSQHQ 267
Query: 134 GSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
SYG ++ G G S+ + SG Y G G+GGS
Sbjct: 268 SSYGPMKSGGGGG--GGGSSWGGRSNSGPYRGGYGGGGGYGGS 308
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 41/115 (35%), Positives = 50/115 (43%)
Query: 88 GDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYGGG--KDIGLTNVQGGSYGDVRGRNRG 145
G G G GG D NG G G N Y G+ GGG G G SYG G + G
Sbjct: 199 GRGGRGRGGGRDQNGLSKGGGGGYNSYG-GYGGGGGGYNAYGGGGGGGSSYG---GSDYG 254
Query: 146 HQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQYG---SKDHRSRDGVGNAFGGA 197
+ GF SY++H+S G G GGS G S +R G G +GG+
Sbjct: 255 NGFGGFG-SYSQHQSSYGPMKSGGGGGGGGSSWGGRSNSGPYRGGYGGGGGYGGS 308
>ZFIN|ZDB-GENE-030912-14 [details] [associations]
symbol:hnrnpa1 "heterogeneous nuclear
ribonucleoprotein A1" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030912-14 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 eggNOG:COG0724
HSSP:P09651 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF CTD:3178 EMBL:BC044442 IPI:IPI00500189
RefSeq:NP_956398.1 UniGene:Dr.67768 ProteinModelPortal:Q803K3
SMR:Q803K3 STRING:Q803K3 PRIDE:Q803K3 GeneID:378453 KEGG:dre:378453
InParanoid:Q803K3 NextBio:20813776 ArrayExpress:Q803K3 Bgee:Q803K3
Uniprot:Q803K3
Length = 422
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 45/150 (30%), Positives = 59/150 (39%)
Query: 59 WGVNGAYTGAYNTGVNGLSNNGIQAL----NTYGDRGYGAGGYTDANGFYHGNLGTKNGY 114
+G NG Y + G G + +G N +G G G GGY Y+ N G G
Sbjct: 226 YGNNGGYNNDFGGGGGGGNRDGYFGRGGRGNNFGGGG-GGGGYGGGGDCYNNNNGFGGG- 283
Query: 115 DVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKAT-Y--YDDGL 171
G+ GGG G GG+ G G GH Y SG Y Y++G
Sbjct: 284 --GYGGGGGNGGGSPGNYGGNRGYGGGGGGGHGYGNQGGGYGGGNSGGGGGGYNNYNNGN 341
Query: 172 GHGGSIQYGSKDHRSRDGVGNAFGGA-YHD 200
G+ G +G G GN+ GG Y+D
Sbjct: 342 GNFGGGNFGG----GGGGGGNSGGGGNYND 367
>UNIPROTKB|E1BZE6 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00812068 ProteinModelPortal:E1BZE6
Ensembl:ENSGALT00000038715 Uniprot:E1BZE6
Length = 380
Score = 117 (46.2 bits), Expect = 0.00023, P = 0.00023
Identities = 44/134 (32%), Positives = 56/134 (41%)
Query: 57 GVWGVNGAYTGA--YNTGVNGLSNNGIQALNTYGDRG-YGAGG---YTDANGFYHGNLGT 110
G G G++ G YN G + YG RG YG GG Y + G Y G G
Sbjct: 251 GGGGSRGSFGGGDGYN-GFGDVKGGNYGGGPGYGSRGGYGGGGGPGYGNPGGGYGGGGGG 309
Query: 111 KNGYDVGHAYGGGKDIGLTNVQG-GSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDD 169
+GY+ G +GGG G N G+Y + N G G S+ SG+ Y
Sbjct: 310 YDGYNEGGNFGGGNYGGSGNYNDFGNYSGQQQSNYGPMKGG--GSFGGRSSGSP---YGG 364
Query: 170 GLGHG-GSIQYGSK 182
G G G GS YG +
Sbjct: 365 GYGSGSGSGGYGGR 378
>UNIPROTKB|K7EKB2 [details] [associations]
symbol:TAF15 "TATA-binding protein-associated factor 2N"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001876 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50199
SMART:SM00547 EMBL:AC015849 HGNC:HGNC:11547 Ensembl:ENST00000585577
Uniprot:K7EKB2
Length = 214
Score = 112 (44.5 bits), Expect = 0.00024, P = 0.00024
Identities = 46/144 (31%), Positives = 57/144 (39%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYG-DRGYGAGGYT-DANGFYHGNLGTKNGY 114
G G G Y G G + G ++ YG DR G GGY+ D +G +G + GY
Sbjct: 63 GYGGERG-YRGRGGRGGDRGGYGGDRSGGGYGGDRSSG-GGYSGDRSGGGYGGDRSGGGY 120
Query: 115 --DVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLG 172
D G YGG + G +GG YG R R G + Y SG G G
Sbjct: 121 GGDRGGGYGGDRGGGYGGDRGGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGG-G 179
Query: 173 HGGSIQYGSKDHRSRDGVGNAFGG 196
+GG G R G G GG
Sbjct: 180 YGGD--RGGGYGGDRGGYGGKMGG 201
Score = 107 (42.7 bits), Expect = 0.00092, P = 0.00092
Identities = 40/116 (34%), Positives = 45/116 (38%)
Query: 88 GDRGYGAGGYTDANGFYHGNLGTKNGYD---VGHAYGGGKDIG-LTNVQGGSYGDVRGRN 143
GDRG G GG G Y G+ + GY G YGG + G +GG YG RG
Sbjct: 78 GDRG-GYGGDRSGGG-YGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 135
Query: 144 RGHQVAGFSTSYNKHES-GNKATYYDDGLGHGGSIQYGSKDHRSRDGVGNAFGGAY 198
G G Y S G G G+GG G RS G G GG Y
Sbjct: 136 YGGDRGG---GYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGY 188
>UNIPROTKB|K7EQQ3 [details] [associations]
symbol:KRT9 "Keratin, type I cytoskeletal 9" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:AC019349 HGNC:HGNC:6447
Ensembl:ENST00000588431 Uniprot:K7EQQ3
Length = 390
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 44/134 (32%), Positives = 55/134 (41%)
Query: 66 TGAYNTGVNGLSNNG-IQALNTYGDRG--YGAGGYTDANGFYHGNLGTKNGYDVGHAYGG 122
+GA G+ G +G + G G YG GG + G Y G G++ G G +YGG
Sbjct: 235 SGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGG---SGGGYGGGSGSRGGS--GGSYGG 289
Query: 123 GKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQYGSK 182
G G GG YG G GH G ++ GN G G GG GS
Sbjct: 290 GSGSG--GGSGGGYGG--GSGGGHS-GGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSG 344
Query: 183 DHRSRDGVGNAFGG 196
SR G G + GG
Sbjct: 345 ---SRGGSGGSHGG 355
Score = 112 (44.5 bits), Expect = 0.00091, P = 0.00091
Identities = 40/141 (28%), Positives = 51/141 (36%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHA 119
G G G+Y G G S + G G G+G + G Y G G+ G G
Sbjct: 243 GGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGS--GGG 300
Query: 120 YGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQY 179
YGGG G + GG + G N G +G G + G HGG +
Sbjct: 301 YGGGSGGGHSGGSGGGHSGGSGGNYGGG-SGSGGGSGGGYGGGSGSRGGSGGSHGGGSGF 359
Query: 180 GSKDHRSRDGVGNAFG--GAY 198
G + S G A G G Y
Sbjct: 360 GGESGGSYGGGEEASGSGGGY 380
>ZFIN|ZDB-GENE-030131-2249 [details] [associations]
symbol:hnrnpa0a "heterogeneous nuclear
ribonucleoprotein A0a" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-2249
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4W6NX4
EMBL:BC066672 IPI:IPI00995382 RefSeq:NP_997810.1 UniGene:Dr.75559
ProteinModelPortal:Q6NYB0 SMR:Q6NYB0 STRING:Q6NYB0 PRIDE:Q6NYB0
GeneID:323529 KEGG:dre:323529 CTD:323529 InParanoid:Q6NYB0
NextBio:20808302 ArrayExpress:Q6NYB0 Bgee:Q6NYB0 Uniprot:Q6NYB0
Length = 305
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 35/94 (37%), Positives = 41/94 (43%)
Query: 85 NTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGHA--YGGGKDIGLTNVQGGS-YGDVRG 141
N YG RG G G Y G Y GN G GY G+ YGGG + GG+ Y D G
Sbjct: 206 NGYGGRGGGYGNY--GGGGYGGNDGYGGGYGGGYGGGYGGGYGDQMEGYGGGNGYNDF-G 262
Query: 142 RNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGG 175
G Q +G+ + SG Y G G GG
Sbjct: 263 SGYGQQSSGYGPMKGNY-SGRSNAPYSRGGGGGG 295
>UNIPROTKB|J9NWS3 [details] [associations]
symbol:KRT9 "Keratin, type I cytoskeletal 9" species:9615
"Canis lupus familiaris" [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044 PANTHER:PTHR23239
Pfam:PF00038 GeneTree:ENSGT00560000076905 EMBL:AAEX03006455
EMBL:AAEX03006458 EMBL:AAEX03006456 EMBL:AAEX03006457
Ensembl:ENSCAFT00000048059 Uniprot:J9NWS3
Length = 595
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00027
Identities = 43/143 (30%), Positives = 57/143 (39%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGD---RGYGAGGYTDANGFYHGNLGTKNGYDV 116
G G+Y G ++G G G +YG G G+GG + G Y G G+ +G
Sbjct: 450 GSGGSYGGGSSSG-GGSGGRGGSG-GSYGGGSGSGGGSGGKGGSGGSYSG--GSSSGGGS 505
Query: 117 GHAYGGGKDIGL-TNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGG 175
G +YGGG G + +GGS G G + G G Y G G GG
Sbjct: 506 GGSYGGGSSSGRGSGGRGGSAGSYGGGSGSGGGRGGGCEEGSGSGGRSGGSYGGGSGSGG 565
Query: 176 SI--QYGSKDHRSRDGVGNAFGG 196
YG S G G ++GG
Sbjct: 566 RSGGSYGGGSG-SGGGSGGSYGG 587
>UNIPROTKB|F1RH94 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:CU468422
Ensembl:ENSSSCT00000015648 Uniprot:F1RH94
Length = 315
Score = 115 (45.5 bits), Expect = 0.00028, P = 0.00028
Identities = 40/112 (35%), Positives = 50/112 (44%)
Query: 88 GDRGYGAGGYTDANGFYHGNLGTKNGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQ 147
G G G GG D NG G G N Y G+ GGG + G SYG G + G+
Sbjct: 199 GRGGRGRGGGRDQNGLSKGGGGGYNSYG-GYGGGGGYNAYGGGGGGSSYG---GSDYGNG 254
Query: 148 VAGFSTSYNKHESGNKATYYDDGLGHGGSIQYG---SKDHRSRDGVGNAFGG 196
GF SY++H+S + G G GGS G S +R G G +GG
Sbjct: 255 FGGFG-SYSQHQS-SYGPMKSGGGGGGGSSWGGRSNSGPYRGGYGGGGGYGG 304
>UNIPROTKB|E1BEG2 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:DAAA02004160
IPI:IPI00690667 Ensembl:ENSBTAT00000028757 Uniprot:E1BEG2
Length = 380
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 50/151 (33%), Positives = 57/151 (37%)
Query: 54 NTPGVWGVNGAYTGAYNTGVN--GLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTK 111
N G G G G + G N G G + G G G GGY G GN G
Sbjct: 222 NFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGD-GGNYGGG 280
Query: 112 NGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGL 171
GY YGGG G N QGG YG G G+ G N GN Y+D
Sbjct: 281 PGYSSRGGYGGGGPGGYGN-QGGGYGGGGGGYDGYNEGGNFGGGNYGGGGN----YNDFG 335
Query: 172 GHGGSIQ--YGSKDHRSRDG--VGNAFGGAY 198
+ G Q YG S G G+ +GG Y
Sbjct: 336 NYSGQQQSNYGPMKGGSFGGRSSGSPYGGGY 366
>UNIPROTKB|O18740 [details] [associations]
symbol:KRT9 "Keratin, type I cytoskeletal 9" species:9615
"Canis lupus familiaris" [GO:0045109 "intermediate filament
organization" evidence=ISS] [GO:0043588 "skin development"
evidence=ISS] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248 GO:GO:0043588
GO:GO:0005198 GO:GO:0005882 GO:GO:0045109 HOVERGEN:HBG013015
InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
HSSP:P08670 eggNOG:NOG148410 KO:K07604 EMBL:AF000949
RefSeq:NP_001014307.1 UniGene:Cfa.38225 ProteinModelPortal:O18740
PRIDE:O18740 GeneID:490980 KEGG:cfa:490980 CTD:3857
InParanoid:O18740 OrthoDB:EOG4BCDNC NextBio:20863900 Uniprot:O18740
Length = 786
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 42/141 (29%), Positives = 60/141 (42%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYG---DRGYGAGGYTDANGFYHGNLGTKNGYDV 116
G G+Y G ++G ++G + +YG G G+GG + G Y G G+ G
Sbjct: 481 GSGGSYGGGSSSGGGSGGSHGGGSGGSYGGGSSSGGGSGGRGGSGGSYGGGSGSGGGSS- 539
Query: 117 GHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
G +YGGG G GGS+G G + G G S+ G Y G G GG
Sbjct: 540 G-SYGGGSSSG--GGSGGSHGGGSGGSYG---GGSSSGGGSGGRGGSGGSYGGGSGSGGG 593
Query: 177 IQYGSKDHRSRDG-VGNAFGG 196
G ++ G G ++GG
Sbjct: 594 RGGGCEEGSGSGGRSGGSYGG 614
>TAIR|locus:2178520 [details] [associations]
symbol:AT5G46730 "AT5G46730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR UniGene:At.47261 EMBL:BT008615
IPI:IPI00523966 RefSeq:NP_199485.2 EnsemblPlants:AT5G46730.1
GeneID:834716 KEGG:ath:AT5G46730 TAIR:At5g46730 OMA:FCGGSSG
ProtClustDB:CLSN2680460 Genevestigator:Q7Y218 Uniprot:Q7Y218
Length = 290
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 46/144 (31%), Positives = 55/144 (38%)
Query: 57 GVWGVN-GAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYD 115
G GV+ G Y G G G S G A YG GA GY G HG G
Sbjct: 44 GSGGVSSGGYGGESGGGYGGGSGEG--AGGGYG----GAEGYASGGGSGHGGGGGGAASS 97
Query: 116 VGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGG 175
G+A G G+ G GG+ G G G G ++Y G A+ Y +G G GG
Sbjct: 98 GGYASGAGEGGG--GGYGGAAGGHAGGGGGGSGGGGGSAYGA--GGEHASGYGNGAGEGG 153
Query: 176 SIQ---YGSKDHRSRDGVGNAFGG 196
YG + G G GG
Sbjct: 154 GAGASGYGGGAYGGGGGHGGGGGG 177
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 43/146 (29%), Positives = 54/146 (36%)
Query: 59 WGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVGH 118
+G G + Y NG G + YG YG GG G G G+ G G
Sbjct: 135 YGAGGEHASGYG---NGAGEGGGAGASGYGGGAYGGGGGHGGGG---GG-GSAGGAHGGS 187
Query: 119 AYGGGKDIGLTNVQGGSYGDVRGRNRGHQV-AGFSTSYNKHESGNKATYYDDGLGHGGSI 177
YGGG+ G GGS+G G G +G +Y G Y G G GG
Sbjct: 188 GYGGGEGGGAGG--GGSHGGAGGYGGGGGGGSGGGGAYGG--GGAHGGGYGSGGGEGGGY 243
Query: 178 QYGSKD-HRSRDGVGNAFGGAYHDAH 202
G+ + G G GG+Y H
Sbjct: 244 GGGAAGGYGGGGGGGEGGGGSYGGEH 269
>UNIPROTKB|F1Q0N7 [details] [associations]
symbol:KRT9 "Keratin, type I cytoskeletal 9" species:9615
"Canis lupus familiaris" [GO:0045109 "intermediate filament
organization" evidence=IEA] [GO:0043588 "skin development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 PRINTS:PR01248 GO:GO:0043588 GO:GO:0005198
GO:GO:0005882 GO:GO:0007283 GO:GO:0045109 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 GeneTree:ENSGT00560000076905
OMA:MALKKNH EMBL:AAEX03006455 EMBL:AAEX03006458 EMBL:AAEX03006456
EMBL:AAEX03006457 Ensembl:ENSCAFT00000025275 Uniprot:F1Q0N7
Length = 649
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 43/143 (30%), Positives = 57/143 (39%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGD---RGYGAGGYTDANGFYHGNLGTKNGYDV 116
G G+Y G ++G G G +YG G G+GG + G Y G G+ +G
Sbjct: 503 GSGGSYGGGSSSG-GGSGGRGGSG-GSYGGGSGSGGGSGGKGGSGGSYSG--GSSSGGGS 558
Query: 117 GHAYGGGKDIGL-TNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGG 175
G +YGGG G + +GGS G G + G G Y G G GG
Sbjct: 559 GGSYGGGSSSGRGSGGRGGSAGSYGGGSGSGGGRGGGCEEGSGSGGRSGGSYGGGSGSGG 618
Query: 176 SI--QYGSKDHRSRDGVGNAFGG 196
YG S G G ++GG
Sbjct: 619 RSGGSYGGGSG-SGGGSGGSYGG 640
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 50/151 (33%), Positives = 64/151 (42%)
Query: 64 AYTGAYNTGVNGLSNNGIQALN--TYGDRGYGAGGYTDANGFYHGNLGTKN---GYDVGH 118
A TG + G G NNG G G+G GG T +GF GN G G G
Sbjct: 14 AKTGFGSGGGFGGGNNGGSGFGGGKNGGTGFG-GGNTGGSGFGGGNTGGSGFGGGKTGGS 72
Query: 119 AYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGF--STSYNKHESGNKATYYDDGLGHGGS 176
+GGG G + GGS G G G +GF ST+ + SG K++ + G GGS
Sbjct: 73 GFGGGNTCG-SGFGGGSTG---GSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGS 128
Query: 177 IQ-YGSKDHRSRDGVGNAFGGAYHDAHLKTN 206
+GS S G + FG H + N
Sbjct: 129 ATGFGSGGG-SFGGGNSGFGEGGHGGGERNN 158
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 50/151 (33%), Positives = 64/151 (42%)
Query: 64 AYTGAYNTGVNGLSNNGIQALN--TYGDRGYGAGGYTDANGFYHGNLGTKN---GYDVGH 118
A TG + G G NNG G G+G GG T +GF GN G G G
Sbjct: 14 AKTGFGSGGGFGGGNNGGSGFGGGKNGGTGFG-GGNTGGSGFGGGNTGGSGFGGGKTGGS 72
Query: 119 AYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGF--STSYNKHESGNKATYYDDGLGHGGS 176
+GGG G + GGS G G G +GF ST+ + SG K++ + G GGS
Sbjct: 73 GFGGGNTCG-SGFGGGSTG---GSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGS 128
Query: 177 IQ-YGSKDHRSRDGVGNAFGGAYHDAHLKTN 206
+GS S G + FG H + N
Sbjct: 129 ATGFGSGGG-SFGGGNSGFGEGGHGGGERNN 158
>UNIPROTKB|H9L3M0 [details] [associations]
symbol:LOC396480 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005200 "structural constituent of
cytoskeleton" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] InterPro:IPR003461 Pfam:PF02422 GO:GO:0005200
GO:GO:0005882 GeneTree:ENSGT00550000075172 EMBL:AADN02074016
Ensembl:ENSGALT00000040784 OMA:TECGVAR Uniprot:H9L3M0
Length = 162
Score = 105 (42.0 bits), Expect = 0.00043, P = 0.00043
Identities = 41/118 (34%), Positives = 55/118 (46%)
Query: 49 GPPLINTP--GVWGVNGAYT-GAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYH 105
GP L + P V G +GA G + G GL G +L YG YG GG + G +
Sbjct: 50 GPILSSFPQDSVVGSSGAPVFGGSSLGYRGLYGYGGSSLG-YGGL-YGYGGSSLGYGGLY 107
Query: 106 GNLGTKNGYDVGHAYG-GGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGN 162
G G+ GY G YG GG +G GG YG R G+ + +S YN++ G+
Sbjct: 108 GYGGSSLGY--GGLYGYGGSSLGY----GGLYGYGRSYGSGY-CSPYSYRYNRYRRGS 158
>TAIR|locus:2168848 [details] [associations]
symbol:AT5G40490 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 EMBL:AB009052 HOGENOM:HOG000234441
HSSP:Q61474 KO:K12741 eggNOG:NOG289504 EMBL:AY136466
IPI:IPI00518075 RefSeq:NP_198865.1 UniGene:At.30284
ProteinModelPortal:Q9FM47 SMR:Q9FM47 PaxDb:Q9FM47 PRIDE:Q9FM47
EnsemblPlants:AT5G40490.1 GeneID:834047 KEGG:ath:AT5G40490
TAIR:At5g40490 InParanoid:Q9FM47 OMA:YESEDMV PhylomeDB:Q9FM47
ProtClustDB:CLSN2916909 ArrayExpress:Q9FM47 Genevestigator:Q9FM47
Uniprot:Q9FM47
Length = 423
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 46/151 (30%), Positives = 53/151 (35%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDR--GYGAGGYTDANGFYHGN--LGTKN 112
G G G G Y +G G YG GYG GGY G Y G LG
Sbjct: 239 GHGGGYGGPGGPYKSG-GGYGGGRSGGYGGYGGEFGGYGGGGYGGGVGPYRGEPALGYSG 297
Query: 113 GYDVGHA-YG-GGKDIGLTNVQGGSYGDVRGRNRGHQVAGF---STSYNKHESGNKATYY 167
Y G Y GG +G GG GD+ G + G G+ S SY + Y
Sbjct: 298 RYGGGGGGYNRGGYSMGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGY 357
Query: 168 DDGLGHGGSIQYGSKDHRSRDGVGNAFGGAY 198
G+G G Y GVG G Y
Sbjct: 358 GGGMGGAGGGGYRGGGGYDMGGVGGGGAGGY 388
>WB|WBGene00018865 [details] [associations]
symbol:F55A12.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:FO080647
PIR:T15188 RefSeq:NP_491571.2 UniGene:Cel.26986
EnsemblMetazoa:F55A12.6 GeneID:186280 KEGG:cel:CELE_F55A12.6
UCSC:F55A12.6 CTD:186280 WormBase:F55A12.6 eggNOG:NOG315082
GeneTree:ENSGT00540000072978 NextBio:931286 Uniprot:O01754
Length = 423
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 37/80 (46%), Positives = 40/80 (50%)
Query: 58 VWGVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYDVG 117
V+G NG Y YN G G NG N YG+ GYG G Y NG Y GN G N Y G
Sbjct: 124 VYG-NGYYGNGYNNGYYG---NGYYG-NGYGN-GYGNGYYNQYNGGYGGN-GYYNQYYNG 176
Query: 118 HAYGGGKDIGLTNV-QGGSY 136
+ Y GG G N QG SY
Sbjct: 177 NNYYGGNR-GYYNYNQGQSY 195
>UNIPROTKB|P35527 [details] [associations]
symbol:KRT9 "Keratin, type I cytoskeletal 9" species:9606
"Homo sapiens" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0043588 "skin
development" evidence=IDA] [GO:0045109 "intermediate filament
organization" evidence=IMP] [GO:0005200 "structural constituent of
cytoskeleton" evidence=TAS] [GO:0008544 "epidermis development"
evidence=TAS] InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
GO:GO:0048471 GO:GO:0043588 GO:GO:0005200 GO:GO:0007283
GO:GO:0045109 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
HOGENOM:HOG000230975 GO:GO:0045095 eggNOG:NOG148410 KO:K07604
EMBL:AC019349 MIM:144200 CTD:3857 OrthoDB:EOG4BCDNC EMBL:Z29074
EMBL:S69510 EMBL:X75015 EMBL:AB001594 EMBL:BC121170 IPI:IPI00019359
PIR:I37984 RefSeq:NP_000217.2 UniGene:Hs.654569
ProteinModelPortal:P35527 SMR:P35527 IntAct:P35527
MINT:MINT-4998976 STRING:P35527 PhosphoSite:P35527 DMDM:239938886
DOSAC-COBS-2DPAGE:P35527 PaxDb:P35527 PeptideAtlas:P35527
PRIDE:P35527 DNASU:3857 Ensembl:ENST00000246662 GeneID:3857
KEGG:hsa:3857 UCSC:uc002hxe.4 GeneCards:GC17M039722
H-InvDB:HIX0039018 HGNC:HGNC:6447 HPA:HPA007261 HPA:HPA009673
MIM:149100 MIM:607606 neXtProt:NX_P35527 Orphanet:2199
PharmGKB:PA30235 InParanoid:P35527 OMA:MALKKNH PhylomeDB:P35527
GenomeRNAi:3857 NextBio:15177 Bgee:P35527 CleanEx:HS_KRT9
Genevestigator:P35527 GermOnline:ENSG00000171403 Uniprot:P35527
Length = 623
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 44/134 (32%), Positives = 55/134 (41%)
Query: 66 TGAYNTGVNGLSNNG-IQALNTYGDRG--YGAGGYTDANGFYHGNLGTKNGYDVGHAYGG 122
+GA G+ G +G + G G YG GG + G Y G G++ G G +YGG
Sbjct: 468 SGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGG---SGGGYGGGSGSRGGS--GGSYGG 522
Query: 123 GKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQYGSK 182
G G GG YG G GH G ++ GN G G GG GS
Sbjct: 523 GSGSG--GGSGGGYGG--GSGGGHS-GGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSG 577
Query: 183 DHRSRDGVGNAFGG 196
SR G G + GG
Sbjct: 578 ---SRGGSGGSHGG 588
>TAIR|locus:2077547 [details] [associations]
symbol:AT3G07030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR002775 Pfam:PF01918
GO:GO:0005829 EMBL:CP002686 GO:GO:0003676 IPI:IPI00519674
RefSeq:NP_187359.2 UniGene:At.74527 ProteinModelPortal:F4JD88
SMR:F4JD88 PRIDE:F4JD88 EnsemblPlants:AT3G07030.1 GeneID:3768790
KEGG:ath:AT3G07030 OMA:ERRNDGY Uniprot:F4JD88
Length = 405
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 47/148 (31%), Positives = 57/148 (38%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNT--YGDRGYGAG-GYTDANGFYHGNLGTK-NGYD 115
G + Y G + G G N+G G RG G GY G Y G G + +GY
Sbjct: 254 GRDDGYGGGRDDGYGGGRNDGYGGRRGGFRGGRGGGRDEGYGGGRGGYGGRSGGQGDGYG 313
Query: 116 VGHA--YGGGKDIGLTNVQGGSYGDVR-GRNRGHQVAGFSTSYNKHESGNKATYYDDGLG 172
G YGGG+ G +G YG R R G + G+ G K+ Y G G
Sbjct: 314 GGRGDGYGGGRGDGYGGGRGDGYGGGRVDRYDGGRRDGYGGGRYDGYGGGKSDGYGGGRG 373
Query: 173 --HGGSIQYG------SKDHRSRDGVGN 192
GG YG RSRDG N
Sbjct: 374 GYRGGRGGYGRGRGRMGNGGRSRDGASN 401
Score = 113 (44.8 bits), Expect = 0.00074, P = 0.00074
Identities = 48/154 (31%), Positives = 60/154 (38%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGI--QALNTYG---DRGYGAG---GYTDA-NGFYHGNLGT 110
G +G Y G + G N+G + + YG D GYG G GY N Y G G
Sbjct: 222 GRDGGYGGGRDDGYGERRNDGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDGYGGRRGG 281
Query: 111 KNGYDVG---HAYGGGKDI--GLTNVQGGSYGDVRGRNRGH-QVAGFSTSYNKHESGNKA 164
G G YGGG+ G + QG YG RG G + G+ G +
Sbjct: 282 FRGGRGGGRDEGYGGGRGGYGGRSGGQGDGYGGGRGDGYGGGRGDGYGGGRGDGYGGGRV 341
Query: 165 TYYDDGL--GHGGSIQYGSKDHRSRDGVGNAFGG 196
YD G G+GG +Y DG G GG
Sbjct: 342 DRYDGGRRDGYGGG-RYDGYGGGKSDGYGGGRGG 374
>DICTYBASE|DDB_G0289901 [details] [associations]
symbol:DDB_G0289901 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
dictyBase:DDB_G0289901 GO:GO:0016021 EMBL:AAFI02000149
RefSeq:XP_635961.1 ProteinModelPortal:Q54GV8
EnsemblProtists:DDB0302663 GeneID:8627376 KEGG:ddi:DDB_G0289901
eggNOG:NOG309517 OMA:SGWMTAS Uniprot:Q54GV8
Length = 1143
Score = 119 (46.9 bits), Expect = 0.00062, P = 0.00062
Identities = 44/151 (29%), Positives = 61/151 (40%)
Query: 54 NTPGVWGVN-GAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKN 112
N+ G G N G TG + G G ++ G N+ G G +GG + + G GN G
Sbjct: 692 NSGGATGGNSGGATGGNSGGATGGNSGGATGGNSGGATGGNSGGASSSGGNTGGNSGGAT 751
Query: 113 GYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSY--NKHESGNK--ATYYD 168
G + G A GG GG+ G G N G +G ++ + GN AT +
Sbjct: 752 GGNSGGATGGNSGGATGGNSGGATGGNSGGNSGASSSGGNSGWLTGGATGGNSGGATGGN 811
Query: 169 DGLGHGGS--IQYGSKDHRSRDGVGNAFGGA 197
G GG+ G+ S G GGA
Sbjct: 812 SGAATGGNSGATGGNSGGNSGAATGGNIGGA 842
>UNIPROTKB|F1M108 [details] [associations]
symbol:F1M108 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00190264
Ensembl:ENSRNOT00000023750 Uniprot:F1M108
Length = 294
Score = 111 (44.1 bits), Expect = 0.00070, P = 0.00070
Identities = 46/151 (30%), Positives = 72/151 (47%)
Query: 54 NTPGVWGVNGAYTGAYNTGVNGLSNNGIQ--ALNTY--GDRGYGAGGYTDAN-GFYHGNL 108
++ G+ G G Y G+ N+ NG N+G + +Y G RGY +GG N G +G
Sbjct: 152 DSDGIGG-GGEYGGSGNS-YNGFGNDGSYEGGVPSYSGGSRGYESGGQCYGNQGSGYGGS 209
Query: 109 GTKNGYDVGHAYGGGKDIGLTNVQGG-SYGDVRGRNRGHQVAGFSTSYNKHESGNKATYY 167
G+ + Y+ GGG+ +N GG SY D N +Q S+S+ + + GN
Sbjct: 210 GSYDSYN----NGGGRGGSFSNFGGGRSYNDFCNYN--NQ----SSSFGRMKGGNIGGR- 258
Query: 168 DDGLGHGGSIQYGSKDHRSRDGVGNAFGGAY 198
+ GL +GG QY +K G++ +Y
Sbjct: 259 NSGL-YGGGGQYFAKPGNQGGYGGSSSSSSY 288
>TAIR|locus:2129590 [details] [associations]
symbol:AT4G14300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002687 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:Z97335 EMBL:AL161538 GO:GO:0003676
GO:GO:0030529 eggNOG:COG0724 HOGENOM:HOG000234441 KO:K14411
HSSP:Q61474 EMBL:AJ303457 EMBL:AK226323 IPI:IPI00517003 PIR:G71404
RefSeq:NP_193166.2 UniGene:At.33295 ProteinModelPortal:Q8W034
SMR:Q8W034 IntAct:Q8W034 MINT:MINT-1163850 STRING:Q8W034
PaxDb:O23288 PRIDE:Q8W034 EnsemblPlants:AT4G14300.1 GeneID:827071
KEGG:ath:AT4G14300 TAIR:At4g14300 InParanoid:Q8W034 OMA:YGATNIP
PhylomeDB:Q8W034 ProtClustDB:CLSN2913105 Genevestigator:Q8W034
Uniprot:Q8W034
Length = 411
Score = 113 (44.8 bits), Expect = 0.00075, P = 0.00075
Identities = 44/149 (29%), Positives = 59/149 (39%)
Query: 57 GVWGVNGAYTGAYNTGVNGLSNNGI-QALNTYGDRGYGAGGYTDANGFYHGNLGTKNGYD 115
G G +Y G ++ L + + L +YG GYGAG +NG +G G G
Sbjct: 209 GYGGNESSYDGRMDSN-RFLQHQSVGNGLPSYGSSGYGAGYGNGSNGAGYGAYGGYTGSA 267
Query: 116 VGHAYGGGKDIGLTNVQGGSYGDVRG---RNRGHQVAGFSTSYNKHESGNKATYYDDGLG 172
G+ G G TN+ G YG G RN A S+ Y GN Y G
Sbjct: 268 GGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPA--SSGY-----GNPG--YGSGAA 318
Query: 173 HGG-SIQYGSKDHRSRDGVGN-AFG-GAY 198
H G + + +S G N +G G Y
Sbjct: 319 HSGYGVPGAAPPTQSPSGYSNQGYGYGGY 347
>CGD|CAL0000304 [details] [associations]
symbol:HYR3 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0009986 "cell surface"
evidence=ISS;IDA] [GO:0009277 "fungal-type cell wall" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] CGD:CAL0000304
GO:GO:0009986 eggNOG:NOG12793 GO:GO:0009277 EMBL:AACQ01000109
EMBL:AACQ01000108 RefSeq:XP_714160.1 RefSeq:XP_714203.1
GeneID:3644119 GeneID:3644197 KEGG:cal:CaO19.575
KEGG:cal:CaO19.8206 InterPro:IPR021031 Pfam:PF11765 Uniprot:Q59XA7
Length = 1249
Score = 118 (46.6 bits), Expect = 0.00090, P = 0.00090
Identities = 50/140 (35%), Positives = 66/140 (47%)
Query: 62 NGAYTGAYNTGVNGLSNNGI---QALNTYGDRGYGAG-GYTDANGFYHG-NLGTKNGYDV 116
NG+ G+ N G N SNNG N + G G+G G+ NG +G N G+ N +
Sbjct: 944 NGSDNGS-NNGSNNGSNNGSGSGNGSNNGSNNGSGSGNGFN--NGSDNGSNNGSGNASNN 1000
Query: 117 GHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
G A G G D G N G G G N G S S + +SGN D+G G+G S
Sbjct: 1001 GSASGSGSDNGSDN--GSDNGSDNGSNNGSNTDNGSNSGS--DSGNGI---DNGSGNGSS 1053
Query: 177 IQYGSKDHRSRDGVGNAFGG 196
GS D+ + +G G+ GG
Sbjct: 1054 D--GS-DNGTTNGSGS--GG 1068
>UNIPROTKB|Q59XA7 [details] [associations]
symbol:HYR3 "Possible cell wall protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009277 "fungal-type cell wall" evidence=IDA] [GO:0009986 "cell
surface" evidence=ISS;IDA] CGD:CAL0000304 GO:GO:0009986
eggNOG:NOG12793 GO:GO:0009277 EMBL:AACQ01000109 EMBL:AACQ01000108
RefSeq:XP_714160.1 RefSeq:XP_714203.1 GeneID:3644119 GeneID:3644197
KEGG:cal:CaO19.575 KEGG:cal:CaO19.8206 InterPro:IPR021031
Pfam:PF11765 Uniprot:Q59XA7
Length = 1249
Score = 118 (46.6 bits), Expect = 0.00090, P = 0.00090
Identities = 50/140 (35%), Positives = 66/140 (47%)
Query: 62 NGAYTGAYNTGVNGLSNNGI---QALNTYGDRGYGAG-GYTDANGFYHG-NLGTKNGYDV 116
NG+ G+ N G N SNNG N + G G+G G+ NG +G N G+ N +
Sbjct: 944 NGSDNGS-NNGSNNGSNNGSGSGNGSNNGSNNGSGSGNGFN--NGSDNGSNNGSGNASNN 1000
Query: 117 GHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGS 176
G A G G D G N G G G N G S S + +SGN D+G G+G S
Sbjct: 1001 GSASGSGSDNGSDN--GSDNGSDNGSNNGSNTDNGSNSGS--DSGNGI---DNGSGNGSS 1053
Query: 177 IQYGSKDHRSRDGVGNAFGG 196
GS D+ + +G G+ GG
Sbjct: 1054 D--GS-DNGTTNGSGS--GG 1068
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.136 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 334 279 0.00081 115 3 11 23 0.45 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 576 (61 KB)
Total size of DFA: 190 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.88u 0.08s 22.96t Elapsed: 00:00:07
Total cpu time: 22.89u 0.08s 22.97t Elapsed: 00:00:08
Start: Thu Aug 15 14:48:21 2013 End: Thu Aug 15 14:48:29 2013