RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5195
(334 letters)
>3bbn_U Ribosomal protein S21; small ribosomal subunit, spinach chloroplast
ribosome, ribonucleoprotein particle, macromolecular
complex; 9.40A {Spinacea oleracea}
Length = 190
Score = 34.9 bits (79), Expect = 0.020
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 241 GQGYTGTFNNGFNPALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQP 300
Q + ++ F+ LP PP P P+ P P +P + S + + N Q
Sbjct: 4 AQPSMASLSSFFSFLLPSKPPPPKPHQPFIASSPSPSNHAAPQFQTLKSRDGSVALNPQQ 63
Query: 301 YPSH 304
P+H
Sbjct: 64 GPNH 67
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface
adhesin WALL, peptidoglycan-anchor, cell adhesion; HET:
PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Length = 497
Score = 32.9 bits (73), Expect = 0.14
Identities = 36/220 (16%), Positives = 61/220 (27%), Gaps = 13/220 (5%)
Query: 97 YTDANGFYHGNLGTKNGYDVGHAYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYN 156
+ G N + GK I N R N +S +
Sbjct: 272 ASAYTGQVEKNTSIFIKNEFTFYDEDGKPINFDNALLSVASLNREHNSIEMAKDYSGKFV 331
Query: 157 KHESGNKATYYDDGLGHGGSIQYGSKDHRSR-DGVGNAFGGAYHDAHLKTNA-------- 207
K SG+ + + ++ + + SR N+ G+ D+ N+
Sbjct: 332 K-ISGSSIGEKNGMIYATDTLNFKQGEGGSRWTMYKNSQAGSGWDSSDAPNSWYGAGAIK 390
Query: 208 -HGNKQNFGGGQGFGTKTGYVNNVGDTKLYGGGVGQGYTGTFNNGFNPALPVLPPAPVPY 266
G G T V+++ G+ ++ +P
Sbjct: 391 MSGPNNYVTVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPKVTKEK 450
Query: 267 IPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPV 306
PP T P P + P PV NY+ P+ P
Sbjct: 451 PTPPVKPTAPTKPTYETEKPL-KPAPV-APNYEKEPTPPT 488
>3jq1_A SUSD superfamily protein; structural genomic center for structural
genomics, JCSG, protein structure INI PSI-2, RAGB; HET:
MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Length = 481
Score = 32.0 bits (73), Expect = 0.31
Identities = 8/56 (14%), Positives = 11/56 (19%), Gaps = 1/56 (1%)
Query: 60 GVNGAYTGAYNTGVNGL-SNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGY 114
+ YT N G G+ D +D N
Sbjct: 16 ALTSCYTPLKNALNGGYYGTRGVMLRIARADEVDFRNDISDVYTVNRFTNSNTNSL 71
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex,
inter-protein beta sheet, protein-protein, metal
transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A
{Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Length = 229
Score = 30.1 bits (67), Expect = 0.88
Identities = 17/69 (24%), Positives = 21/69 (30%)
Query: 254 PALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPVGLVTRSS 313
P PV+ P P P P P PV+ + P P PV QP +S
Sbjct: 54 PPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPAS 113
Query: 314 TKYQIPAPT 322
Sbjct: 114 PFENTAPAR 122
Score = 27.8 bits (61), Expect = 4.3
Identities = 13/69 (18%), Positives = 19/69 (27%)
Query: 254 PALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPVGLVTRSS 313
P P P P P VI P P V ++ +P S P ++
Sbjct: 60 EPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTA 119
Query: 314 TKYQIPAPT 322
+
Sbjct: 120 PARLTSSTA 128
Score = 27.8 bits (61), Expect = 4.6
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 254 PALPVLPPAPVPYIPPPPVITPPVLPQSPVI 284
P PP PV P P P ++PV+
Sbjct: 48 PQAVQPPPEPVVEPEPEPEPIPEPPKEAPVV 78
Score = 27.8 bits (61), Expect = 4.9
Identities = 8/52 (15%), Positives = 12/52 (23%)
Query: 254 PALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHP 305
PV P+ P + V S + P +P
Sbjct: 103 DVKPVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYP 154
Score = 27.4 bits (60), Expect = 7.0
Identities = 11/69 (15%), Positives = 18/69 (26%)
Query: 254 PALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPVGLVTRSS 313
P V P P P + PV ++ P+ + +T S+
Sbjct: 68 IPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARLTSST 127
Query: 314 TKYQIPAPT 322
P
Sbjct: 128 ATAATSKPV 136
Score = 27.0 bits (59), Expect = 8.5
Identities = 10/43 (23%), Positives = 12/43 (27%)
Query: 254 PALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITK 296
P P PPP + P P+ VI K
Sbjct: 39 MVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEK 81
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription,
multi-protein complex, DNA- binding, magnesium; 3.65A
{Schizosaccharomyces pombe}
Length = 1752
Score = 30.8 bits (69), Expect = 0.88
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 231 GDTKLYGGGVGQGYTGTFNNGFNPALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSP 290
G Y G GYT F++ +P + P+ P P +P +P SP S SP
Sbjct: 1526 GAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYST-SPAYMPSSPSYSPT-SP 1583
Query: 291 N 291
+
Sbjct: 1584 S 1584
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein,
abnormal nuclear; zinc-finger, beta barrel, VWA domain,
gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP:
a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Length = 926
Score = 30.2 bits (67), Expect = 1.2
Identities = 16/109 (14%), Positives = 24/109 (22%), Gaps = 2/109 (1%)
Query: 201 AHLKTNAHGNKQ-NFGGGQGFGTKTGYVNNVGDTKLYGGGVGQ-GYTGTFNNGFNPALPV 258
+H K + Q +G + D G GQ G
Sbjct: 2 SHHKKRVYPQAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQF 61
Query: 259 LPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPVG 307
L PA T + + PN + P+
Sbjct: 62 LTPAQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQ 110
Score = 28.6 bits (63), Expect = 4.0
Identities = 10/82 (12%), Positives = 19/82 (23%), Gaps = 5/82 (6%)
Query: 241 GQGYTGTFNNGFNPALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQP 300
Q + ++ + VP + P + P V Q P
Sbjct: 65 AQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMG-----TPLQQQQQPMAAP 119
Query: 301 YPSHPVGLVTRSSTKYQIPAPT 322
P + ++ P
Sbjct: 120 AYGQPSAAMGQNMRPMNQLYPI 141
Score = 28.3 bits (62), Expect = 4.7
Identities = 11/96 (11%), Positives = 20/96 (20%)
Query: 207 AHGNKQNFGGGQGFGTKTGYVNNVGDTKLYGGGVGQGYTGTFNNGFNPALPVLPPAPVPY 266
+ G +Q Q + ++ V + P P
Sbjct: 55 SMGQQQFLTPAQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQ 114
Query: 267 IPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYP 302
P P + + P+ P P
Sbjct: 115 PMAAPAYGQPSAAMGQNMRPMNQLYPIDLLTELPPP 150
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL
biogenesis/degradation, cell cycle, P transferase; HET:
GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A*
2vg4_A
Length = 284
Score = 29.1 bits (66), Expect = 1.7
Identities = 16/64 (25%), Positives = 19/64 (29%), Gaps = 10/64 (15%)
Query: 257 PVLPPAPVPY-IPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPVGLVTRSSTK 315
P LPPAP Y P P V P+ P P P H
Sbjct: 2 PQLPPAPDDYPTFPDTSTWPVVFPELPAAPYGGPCRP---------PQHTSKAAAPRIPA 52
Query: 316 YQIP 319
++P
Sbjct: 53 DRLP 56
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription,
mRNA, multiprotein complex; HET: UTP; 2.30A
{Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A
1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A*
1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A*
1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 29.3 bits (65), Expect = 2.5
Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 251 GFNPALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPVGLVT 310
++P P P Y P P +P SP S +SP P S +
Sbjct: 1625 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPAYSPTSPSYSPTSPSYSPTSPSYS 1683
Query: 311 RSSTKYQIPAP 321
+S Y +P
Sbjct: 1684 PTSPSYSPTSP 1694
Score = 27.4 bits (60), Expect = 9.4
Identities = 21/110 (19%), Positives = 30/110 (27%), Gaps = 6/110 (5%)
Query: 216 GGQGFGTKTGYVNNVGDTKLYGGGVGQGYTGTFNNGFNPALPVLPPAPVPYIPPPPVITP 275
G + G+ G G+ T +P P P P +P
Sbjct: 1502 DAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSP 1561
Query: 276 PVLPQSPV---ISGVFSPNPVITKNYQPYPSHPVGLVTRSSTKYQIPAPT 322
P SP S +SP + +Y P S +PT
Sbjct: 1562 SYSPTSPSYSPTSPSYSPT---SPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
>1jvr_A HTLV-II MA, MA, human T-cell leukemia virus type II matrix protein;
HTLV-II matrix protein, retroviral matrix protein; NMR
{Human t-lymphotropic virus 2} SCOP: a.61.1.2
Length = 137
Score = 27.9 bits (61), Expect = 2.9
Identities = 13/51 (25%), Positives = 16/51 (31%)
Query: 232 DTKLYGGGVGQGYTGTFNNGFNPALPVLPPAPVPYIPPPPVITPPVLPQSP 282
D L + +GY G N + P P P I P P P
Sbjct: 65 DYSLLASLIPKGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPP 115
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center
structural genomics, JCSG, protein structure initiative;
HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Length = 535
Score = 28.7 bits (64), Expect = 3.1
Identities = 7/55 (12%), Positives = 13/55 (23%), Gaps = 1/55 (1%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGY 114
+ G Y + G + + L T G + + T
Sbjct: 23 VLLGVYRTNTLDAMYGYYLSILFNLGT-DISQVEGSGNENFRIIPTNSFPTTQSE 76
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics,
NPPSFA, nationa on protein structural and functional
analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Length = 425
Score = 28.6 bits (65), Expect = 3.3
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 15/39 (38%)
Query: 134 GSYG-DVRGRNRGHQVAGF-----------STSYNKHES 160
G+YG D+RG R HQ F TSY++ E
Sbjct: 266 GAYGKDIRGIIRQHQ---FDKVELVKIVHPDTSYDELEK 301
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic
dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP;
2.27A {Mus musculus}
Length = 536
Score = 28.5 bits (64), Expect = 3.4
Identities = 12/38 (31%), Positives = 14/38 (36%), Gaps = 11/38 (28%)
Query: 134 GSYG-DVRGRNRGHQ----------VAGFSTSYNKHES 160
GS+G DVRG R HQ A S +
Sbjct: 369 GSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 406
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus
thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A*
1set_A* 1sry_A
Length = 421
Score = 28.3 bits (64), Expect = 4.4
Identities = 12/38 (31%), Positives = 14/38 (36%), Gaps = 11/38 (28%)
Query: 134 GSYG-DVRGRNRGHQ----------VAGFSTSYNKHES 160
GS+G DVRG R HQ A S +
Sbjct: 260 GSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 297
>3bso_A RNA dependent RNA polymerase; RNA-dependent RNA polymerase, viral
replication, antiviral E inhibitor, helicase, hydrolase;
HET: CTP; 1.74A {Norwalk virus} PDB: 3bsn_A* 3h5x_A*
3h5y_A* 1sh0_A 1sh2_A 1sh3_A 2b43_A
Length = 510
Score = 27.9 bits (61), Expect = 5.8
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 14/78 (17%)
Query: 246 GTFNNGFNPALPVLPPAPVPYIP-------------PPPVITPPVL-PQSPVISGVFSPN 291
G+ + G P+L P P + PP P L + P + G S
Sbjct: 1 GSDSKGTYCGAPILGPGSAPKLSTKTKFWRSSTAPLPPGTYEPAYLGGKDPRVKGGPSLQ 60
Query: 292 PVITKNYQPYPSHPVGLV 309
V+ +P+
Sbjct: 61 QVMRDQLKPFTEPRGKPP 78
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring
E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A
{Saccharomyces cerevisiae}
Length = 371
Score = 27.6 bits (60), Expect = 5.8
Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 2/69 (2%)
Query: 261 PAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPVGLV--TRSSTKYQI 318
P+ I + PP + Q SP + S SS+
Sbjct: 2 LTPLSAITVRSMEGPPTVQQQSPSVIRQSPTQRRKTSTTSSTSRAPPPTNPDASSSSSSF 61
Query: 319 PAPTKLFVD 327
PT F +
Sbjct: 62 AVPTIHFKE 70
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A
{Leuconostoc mesenteroides} PDB: 3tto_A*
Length = 1108
Score = 27.7 bits (61), Expect = 7.3
Identities = 14/144 (9%), Positives = 30/144 (20%), Gaps = 1/144 (0%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGY-GAGGYTDANGFYHGNLGTKNGYDVGH 118
G + A N G+ A+ +Y NG
Sbjct: 213 GNGEYLFTNTLDMSTNAFSTKNVAFNHDSSSFDHTVDGFLTADTWYRPKSILANGTTWRD 272
Query: 119 AYGGGKDIGLTNVQGGSYGDVRGRNRGHQVAGFSTSYNKHESGNKATYYDDGLGHGGSIQ 178
+ +T V N +T+ ++ +I+
Sbjct: 273 STDKDMRPLITVWWPNKNVQVNYLNFMKANGLLTTAAQYTLHSDQYDLNQAAQDVQVAIE 332
Query: 179 YGSKDHRSRDGVGNAFGGAYHDAH 202
D + + ++
Sbjct: 333 RRIASEHGTDWLQKLLFESQNNNP 356
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane
protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP:
c.30.1.5 d.142.1.3 PDB: 1px2_A*
Length = 422
Score = 27.1 bits (59), Expect = 8.7
Identities = 16/70 (22%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Query: 244 YTGTFNNGFNPALPVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPS 303
+ NG+ L P P P P TP S S + P P
Sbjct: 14 FMANLPNGYMTDLQRPQPPPPPPSAASPGATPGSAAASA---ERASTAAPVASPAAPSPG 70
Query: 304 HPVGLVTRSS 313
G SS
Sbjct: 71 SSGGGGFFSS 80
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins,
structural genomics, J center for structural genomics,
JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Length = 454
Score = 27.0 bits (60), Expect = 9.0
Identities = 11/55 (20%), Positives = 15/55 (27%), Gaps = 2/55 (3%)
Query: 60 GVNGAYTGAYNTGVNGLSNNGIQALNTYGDRGYGAGGYTDANGFYHGNLGTKNGY 114
VNG Y +G G + GD + N Y N +
Sbjct: 19 AVNGLYDLMSGSGYYG--AAMFAYGDMKGDDMQSSEESGVCNTCYMFNHRPNSLN 71
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase,
complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas
testosteroni} PDB: 2dki_A*
Length = 639
Score = 27.2 bits (60), Expect = 9.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 250 NGFNPALPVLPPAPVPYIPPPPVITP---PVL 278
NGF P P++ PA P P P VL
Sbjct: 6 NGFRPGNPLIAPAS-PLAPAHTEAVPSQVDVL 36
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 27.3 bits (60), Expect = 9.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
Query: 163 KATYYDDGLGHGGSIQYGSKDHRSRDG--VGNAFGGAYHDAHLKTNA---HGNKQ 212
KAT+ D G GG+ G HR++DG V G L N +G KQ
Sbjct: 497 KATHILD-FGPGGASGLGVLTHRNKDGTGVRVIVAGT-----LDINPDDDYGFKQ 545
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 27.0 bits (58), Expect = 9.3
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Query: 257 PVLPPAPVPYIPPPPVITPPVLPQSPVISGVFSPNPVITKNYQPYPSHPVGLVTRSSTKY 316
LP +P PPV PP S + + P V ++ +
Sbjct: 26 ATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFED---TFVPEISVTTPSQPAEAS 82
Query: 317 QIPAPTK 323
++ T+
Sbjct: 83 EVAGGTQ 89
>3ayx_B Membrane-bound hydrogenase small subunit; oxidoreductase,
membrane-bound NI-Fe hydrogenase; 1.18A {Hydrogenovibrio
marinus} PDB: 3ayy_B 3ayz_B
Length = 283
Score = 26.9 bits (59), Expect = 9.3
Identities = 8/50 (16%), Positives = 14/50 (28%), Gaps = 2/50 (4%)
Query: 223 KTGYVNNVGDTKLYGGGVGQGYTGTFNNGFNPALPVLPPAPVPYIP--PP 270
+ + G +G T + L P+ +P PP
Sbjct: 111 DAKAIISWGSCASWGCVQAAKPNPTQATPVHKFLGGGYDKPIIKVPGCPP 160
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.313 0.138 0.426
Gapped
Lambda K H
0.267 0.0481 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,337,069
Number of extensions: 341987
Number of successful extensions: 754
Number of sequences better than 10.0: 1
Number of HSP's gapped: 699
Number of HSP's successfully gapped: 93
Length of query: 334
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 240
Effective length of database: 4,077,219
Effective search space: 978532560
Effective search space used: 978532560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.3 bits)