Query psy5196
Match_columns 252
No_of_seqs 118 out of 723
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 19:46:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5196.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5196hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03202 protein argonaute; Pr 100.0 1.3E-40 2.9E-45 333.1 22.9 211 25-242 31-279 (900)
2 KOG1042|consensus 100.0 4.7E-29 1E-33 233.1 10.4 183 34-243 87-272 (845)
3 KOG1041|consensus 99.9 1.9E-24 4E-29 215.9 20.5 217 25-248 43-268 (876)
4 PF08699 DUF1785: Domain of un 99.8 2.1E-20 4.7E-25 124.0 3.8 51 178-230 1-52 (52)
5 PF06773 Bim_N: Bim protein N- 37.6 38 0.00082 20.6 2.3 33 12-46 6-39 (41)
6 PF14157 YmzC: YmzC-like prote 26.8 53 0.0012 22.4 1.9 25 40-64 23-47 (63)
7 COG1110 Reverse gyrase [DNA re 23.8 1.2E+02 0.0026 32.1 4.6 44 130-173 972-1020(1187)
8 KOG2488|consensus 23.5 1.5E+02 0.0032 25.1 4.3 39 48-86 109-148 (202)
9 PF14699 hGDE_N: N-terminal do 22.2 63 0.0014 23.4 1.8 16 33-48 6-21 (86)
10 PF09261 Alpha-mann_mid: Alpha 22.2 29 0.00062 24.4 -0.0 9 201-209 1-9 (80)
No 1
>PLN03202 protein argonaute; Provisional
Probab=100.00 E-value=1.3e-40 Score=333.13 Aligned_cols=211 Identities=29% Similarity=0.440 Sum_probs=177.1
Q ss_pred ccCCCCCCCCCCCCCCeEEEEeeeeeeeecCCCeeEEEeEEEeCCCC-----ChhhhHHHHHHHHHHhCC---CCCeEec
Q psy5196 25 YQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-----PVRYMRPVMQKVAREYFP---NSPCGYD 96 (252)
Q Consensus 25 ~~~p~R~~P~~Gt~G~~i~l~tN~f~i~~~~p~~~iy~Y~V~i~P~~-----~~~~~r~i~~~l~~~~~~---~~~~~yD 96 (252)
+.+|+| ||||+.|++|+|+||||+|.+..|++.+|||+|+|+|+. .++++++|++++.+++.. +..+|||
T Consensus 31 ~~~~~R--Pg~Gt~G~~i~l~aN~f~v~~~~~~~~ly~Y~V~i~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~D 108 (900)
T PLN03202 31 RLPMAR--RGFGSKGQKIQLLTNHFKVSVNNPDGHFFHYSVSLTYEDGRPVDGKGIGRKVIDKVQETYSSDLAGKDFAYD 108 (900)
T ss_pred cccCCC--CCCCCCCCEEEEEeeEEEEeccCCCCcEEEEEEEeccCCCCcccchhhhHHHHHHHHHhhHHhhCCCceeec
Confidence 366779 999999999999999999997435788999999999742 256778888888765422 4478999
Q ss_pred CCcceEecCCCCCCCCCceEEEEeeCCC----------------------------CccceEEEEEEeecccChhhHHHH
Q psy5196 97 GKKNLFSKGTLPFGTAMNCTVSIFDEER----------------------------MKDKEYKVEIKKAQEISFASIVEF 148 (252)
Q Consensus 97 G~~~lyS~~~L~~~~~~~~~~~v~~~~~----------------------------~~~~~~~v~I~~~~~i~l~~l~~~ 148 (252)
|+++|||+.+||.+.. ++.|..+++ ++++.|+|+|++++++++++|.+|
T Consensus 109 g~~~l~s~~~L~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~i~~~~L~~~ 185 (900)
T PLN03202 109 GEKSLFTVGALPQNKL---EFTVVLEDVSSNRNNGNGSPVGNGSPNGGDRKRSRRPYQSKTFKVEISFAAKIPMQAIANA 185 (900)
T ss_pred CccceEECccCCCCCc---eEEEEecccccccccccccccccCCccccccccccccCCCceEEEEEEEccccCHHHHHHH
Confidence 9999999999997544 555543210 125789999999999999999999
Q ss_pred HhcCCC-ChhHHHHHHHHHHhCCCcCCCCeeeecccccCCCCCCCcccCCCcEEEeeeeeeeeeec-CceEEEeecCccc
Q psy5196 149 MRTGVN-RPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKG 226 (252)
Q Consensus 149 l~~~~~-~~~~~iq~Lnivlr~~~~~~~~~~~vGr~fF~~~~~~~~~~l~~GlE~w~Gf~~SvR~~-~~l~LNvDvs~~~ 226 (252)
|.+... ...++||+||+|||+.++. .+++.+||+||. +......+|+.|+|+|+|||+||||+ ++|+||||++|++
T Consensus 186 l~~~~~~~~~~~iq~lnivlr~~~~~-~~~~~~gr~ff~-~~~~~~~~l~~gle~~~G~~~Svr~~~~~l~LnvDvs~~~ 263 (900)
T PLN03202 186 LRGQESENSQDALRVLDIILRQHAAK-QGCLLVRQSFFH-NDPKNFVDLGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTM 263 (900)
T ss_pred HcCCCCCCcHHHHHHHHHHHhhhhhh-CCCceeccccCC-CCCcccccCCCceEEeeeeeeEeeeccCceEEeeeeeeee
Confidence 999866 7889999999999999876 358889999998 54345567899999999999999999 9999999999999
Q ss_pred cCCCCcHHHHHHHHhc
Q psy5196 227 FPEEKSVIKVIDEICR 242 (252)
Q Consensus 227 F~~~~~l~d~i~e~~~ 242 (252)
||++++|+|+|.++.+
T Consensus 264 F~~~~~l~~~l~~~~~ 279 (900)
T PLN03202 264 IVQPGPVVDFLIANQN 279 (900)
T ss_pred eecCCcHHHHHHHhcC
Confidence 9999999999998764
No 2
>KOG1042|consensus
Probab=99.96 E-value=4.7e-29 Score=233.12 Aligned_cols=183 Identities=21% Similarity=0.392 Sum_probs=155.6
Q ss_pred CCCCCCCeEEEEeeeeeeeecCCCeeEEEeEEEeCCC-CChhhhHHHHHHHHHHhCCCCCeEecCCcceEecCCCCCCCC
Q psy5196 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPD-KPVRYMRPVMQKVAREYFPNSPCGYDGKKNLFSKGTLPFGTA 112 (252)
Q Consensus 34 ~~Gt~G~~i~l~tN~f~i~~~~p~~~iy~Y~V~i~P~-~~~~~~r~i~~~l~~~~~~~~~~~yDG~~~lyS~~~L~~~~~ 112 (252)
+.|+.|.+++|.||||++... |+|.||||||+|+|. +.+++++.++..+.+.. +..++|||. +||.++++..+.
T Consensus 87 KtGssG~pv~l~tN~f~l~t~-p~w~iyqYhVef~P~ves~rlR~~~L~~h~~li--g~~~~FDG~-iLfl~~k~eq~~- 161 (845)
T KOG1042|consen 87 KTGSSGIPVKLQTNFFRLMTR-PDWSIYQYHVEFEPDVESRRLREALLYNHTDLI--GKGYAFDGT-ILFLKEKFEQKQ- 161 (845)
T ss_pred ccCCCCceEEEEeceeeeccC-CCcEEEEEEEeeccccccHHHHHHHHHHhHhhh--ccceeecce-eehhhHHHhhhh-
Confidence 569999999999999999998 999999999999998 67788888887666555 778999995 799999997432
Q ss_pred CceEEEEeeCCCCccceEEEEEEeecccChhhHHHHHhcCCCChhHHHHHHHHHHhCCCcCCCCeeeecccccCCCCCCC
Q psy5196 113 MNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVEFMRTGVNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNR 192 (252)
Q Consensus 113 ~~~~~~v~~~~~~~~~~~~v~I~~~~~i~l~~l~~~l~~~~~~~~~~iq~Lnivlr~~~~~~~~~~~vGr~fF~~~~~~~ 192 (252)
+..+..+ .+...++|+|++++.+... .++++|++|+|||+.+.. +++.++||+||+ |. +
T Consensus 162 ---tel~~ks--~~ge~i~I~ik~~~~~~~t------------~p~~iqv~NlI~RR~~k~-L~L~qigRnyyn-p~--~ 220 (845)
T KOG1042|consen 162 ---TELVSKS--RDGELIKITIKLTNELPST------------DPQCIQVFNLILRRSMKG-LNLTQIGRNYYD-PR--A 220 (845)
T ss_pred ---heeeccc--CCCceEEEEEEEeccccCC------------ChhHHHHHHHHHHHHHhh-ccHHHhhhccCC-CC--c
Confidence 2223322 2456899999999998764 468999999999999875 689999999999 75 6
Q ss_pred cccC-CCcEEEeeeeeeeeeec-CceEEEeecCccccCCCCcHHHHHHHHhcC
Q psy5196 193 LVDL-GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEICRG 243 (252)
Q Consensus 193 ~~~l-~~GlE~w~Gf~~SvR~~-~~l~LNvDvs~~~F~~~~~l~d~i~e~~~~ 243 (252)
+.+| .+.+++||||-+|||.. ..++||.|++|++++ ..+|+|+|..+.+.
T Consensus 221 ~i~ip~~km~lwPGy~tSIrq~E~~illctei~hKvmR-~ETvy~~m~~~~~~ 272 (845)
T KOG1042|consen 221 KIEIPEFKMSLWPGYETSIRQHENDILLCTEISHKVMR-TETVYDIMRSCQHN 272 (845)
T ss_pred ccccccccceecCcchhHHHHhhhceeeehhhhhhHhh-hhHHHHHHHHHhhC
Confidence 7888 78999999999999999 999999999999996 68999999887654
No 3
>KOG1041|consensus
Probab=99.93 E-value=1.9e-24 Score=215.90 Aligned_cols=217 Identities=29% Similarity=0.432 Sum_probs=170.8
Q ss_pred ccCCCCCCCCCCCCCCeEEEEeeeeeeeecCCCee-EEEeEEEeCCCCC-hhhhH-HHHHHHHHHh--C--CCCCeEecC
Q psy5196 25 YQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLV-IFHYDVAIDPDKP-VRYMR-PVMQKVAREY--F--PNSPCGYDG 97 (252)
Q Consensus 25 ~~~p~R~~P~~Gt~G~~i~l~tN~f~i~~~~p~~~-iy~Y~V~i~P~~~-~~~~r-~i~~~l~~~~--~--~~~~~~yDG 97 (252)
...+.| |+.|+.|+++.|.+|||.+..+.|+.. +++|+|++.++.. +...+ .++..+.... + .....+|||
T Consensus 43 ~~~~~r--p~~~~~g~~i~~~~n~f~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YDg 120 (876)
T KOG1041|consen 43 RFPMNR--PGGGTKGKKIMVLVNHFKVDLKFTEESLFVHYSVGIFNEHGRRKVQCLRFFLDKVKNPELFELKSGGPAYDG 120 (876)
T ss_pred cccccC--CCCCccceEEEEeeeEEEeccccCCcceEEEeeeeecCCCCchHHHHHHHHHHHHhccccccccCCcccccC
Confidence 466678 999999999999999999887656665 9999999999843 44443 4444333322 2 244556999
Q ss_pred CcceEecCCCCCCCCCceEEEEeeCCCCccceEEEEEEeecccChhhHHHHHhcCCC-ChhHHHHHHHHHHhCCCcCCCC
Q psy5196 98 KKNLFSKGTLPFGTAMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVEFMRTGVN-RPQIAIQALDVVLREPCSLNAN 176 (252)
Q Consensus 98 ~~~lyS~~~L~~~~~~~~~~~v~~~~~~~~~~~~v~I~~~~~i~l~~l~~~l~~~~~-~~~~~iq~Lnivlr~~~~~~~~ 176 (252)
+++|||..+++.... ..++.+..+++. ..|++.|+++..+.+..+..++.++.. .+.+++|+|++++++.+.. ..
T Consensus 121 ~~~lyt~~~~~~~~~-~~~~~~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~s~-~~ 196 (876)
T KOG1041|consen 121 QKTLYTKLELPEGVV-TLDFDVISPKEW--KKFKVSIKKVSEVVLTKLNGFIYTRGENAPRDANQTLDVVLREIATS-QG 196 (876)
T ss_pred CceeEeccccccccc-eEEEEecCCCCC--cceEEEEEecccccccCccccccCccccCchhHHHHHHHHHHhhhch-hc
Confidence 999999777775222 345666655432 239999999998888888888887766 7889999999999999987 23
Q ss_pred eeeecccccCCCCCCCcccCCCcEEEeeeeeeeeeec-CceEEEeecCccccCCCCcHHHHHHHHhcCCCCCC
Q psy5196 177 FVRVGRSYFSPPDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEICRGLPPEL 248 (252)
Q Consensus 177 ~~~vGr~fF~~~~~~~~~~l~~GlE~w~Gf~~SvR~~-~~l~LNvDvs~~~F~~~~~l~d~i~e~~~~~~~~l 248 (252)
+..+|++||. ........+++|.|+|.||++|+|++ |+++||+|+++++||++++|+++++++++-..+.+
T Consensus 197 ~~~~~~sff~-~~~~~~~~l~~g~e~~~Gf~~s~r~~~~~~~l~id~~~~~F~k~~~~~~~l~~~~~~~~~~~ 268 (876)
T KOG1041|consen 197 LNNVGYSFFG-NDTREPAKLGGGVEIWEGFHKSIRPTQGGLSLNIDVKTTAFYKGTPVIEFLKKILEIKTRAF 268 (876)
T ss_pred ccccchheec-CCCCCccccCCCceeeeeeeeeeeeccCceEEeeeeeeeeeecCcchHHHHHhhhcCccccc
Confidence 9999999998 42223445899999999999999999 99999999999999999999999999998654433
No 4
>PF08699 DUF1785: Domain of unknown function (DUF1785); InterPro: IPR014811 This region is found in argonaute [] proteins and often co-occurs with IPR003103 from INTERPRO and IPR003165 from INTERPRO. ; PDB: 1R6Z_P 3MJ0_A 4EI1_A 4F3T_A 4EI3_A 1R4K_A.
Probab=99.80 E-value=2.1e-20 Score=124.01 Aligned_cols=51 Identities=47% Similarity=0.774 Sum_probs=41.4
Q ss_pred eeecccccCCCCCCCcccCCCcEEEeeeeeeeeeec-CceEEEeecCccccCCC
Q psy5196 178 VRVGRSYFSPPDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEE 230 (252)
Q Consensus 178 ~~vGr~fF~~~~~~~~~~l~~GlE~w~Gf~~SvR~~-~~l~LNvDvs~~~F~~~ 230 (252)
+.+||+||+ ++. ...+|++|+|+|+||||||||+ ++|+||||+++++||+|
T Consensus 1 ~~vgrsFF~-~~~-~~~~l~~Gle~~rG~~qSvRp~~~~l~lNvDvs~~aF~~p 52 (52)
T PF08699_consen 1 TAVGRSFFP-PSG-GPVDLGGGLEAWRGFFQSVRPTQGGLLLNVDVSHTAFYKP 52 (52)
T ss_dssp EEETTEEEE--------EEETTEEEEEEEEEEEEEETTEEEEEEECCEECCC--
T ss_pred CccccccCC-CCC-CCccCCCcEEEeEeEEeeeEEcCCCCEEEEeCceeeEECc
Confidence 468999999 442 3378999999999999999999 99999999999999975
No 5
>PF06773 Bim_N: Bim protein N-terminus; InterPro: IPR014771 Apoptosis, or programmed cell death (PCD), is a common and evolutionarily conserved property of all metazoans []. In many biological processes, apoptosis is required to eliminate supernumerary or dangerous (such as pre-cancerous) cells and to promote normal development. Dysregulation of apoptosis can, therefore, contribute to the development of many major diseases including cancer, autoimmunity and neurodegenerative disorders. In most cases, proteins of the caspase family execute the genetic programme that leads to cell death. Bcl-2 proteins are central regulators of caspase activation, and play a key role in cell death by regulating the integrity of the mitochondrial and endoplasmic reticulum (ER) membranes []. At least 20 Bcl-2 proteins have been reported in mammals, and several others have been identified in viruses. Bcl-2 family proteins fall roughly into three subtypes, which either promote cell survival (anti-apoptotic) or trigger cell death (pro-apoptotic). All members contain at least one of four conserved motifs, termed Bcl-2 Homology (BH) domains. Bcl-2 subfamily proteins, which contain at least BH1 and BH2, promote cell survival by inhibiting the adapters needed for the activation of caspases. Pro-apoptotic members potentially exert their effects by displacing the adapters from the pro-survival proteins; these proteins belong either to the Bax subfamily, which contain BH1-BH3, or to the BH3 subfamily, which mostly only feature BH3 []. Thus, the balance between antagonistic family members is believed to play a role in determining cell fate. Members of the wider Bcl-2 family, which also includes Bcl-x, Bcl-w and Mcl-1, are described by their similarity to Bcl-2 protein, a member of the pro-survival Bcl-2 subfamily []. Full-length Bcl-2 proteins feature all four BH domains, seven alpha-helices, and a C-terminal hydrophobic motif that targets the protein to the outer mitochondrial membrane, ER and nuclear envelope. This entry represents the N-terminal region of several mammal specific Bim proteins. The Bim protein is one of the BH3-only proteins, members of the Bcl-2 family that have only one of the Bcl-2 homology regions, BH3.
Probab=37.63 E-value=38 Score=20.61 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=19.4
Q ss_pred cccccCC-CCCCCCccCCCCCCCCCCCCCCeEEEEe
Q psy5196 12 ISSAASG-AGSKGLYQIPRRSNKDGGTLGRRTQVDT 46 (252)
Q Consensus 12 ~~~~~~~-~~~~~~~~~p~R~~P~~Gt~G~~i~l~t 46 (252)
.|-|-+| +|+....+-|.- +..=.-|.++.|.|
T Consensus 6 s~eCd~~EGgqLqp~er~~q--~r~lr~GAPTSl~t 39 (41)
T PF06773_consen 6 SSECDRGEGGQLQPTERPPQ--LRPLRPGAPTSLQT 39 (41)
T ss_pred ccccccccccccccccCCcc--cCcccCCCCccccc
Confidence 4679998 888877665544 33322345554443
No 6
>PF14157 YmzC: YmzC-like protein; PDB: 3KVP_E.
Probab=26.79 E-value=53 Score=22.41 Aligned_cols=25 Identities=40% Similarity=0.713 Sum_probs=17.2
Q ss_pred CeEEEEeeeeeeeecCCCeeEEEeE
Q psy5196 40 RRTQVDTNHFAITFKNPNLVIFHYD 64 (252)
Q Consensus 40 ~~i~l~tN~f~i~~~~p~~~iy~Y~ 64 (252)
.-++|-=|+|.+.-.....+||.|+
T Consensus 23 ~m~ql~~N~Fav~~e~~~iKIfkyd 47 (63)
T PF14157_consen 23 NMTQLEHNHFAVVDEDGQIKIFKYD 47 (63)
T ss_dssp EEEE-STTEEEEE-ETTEEEEEEEE
T ss_pred ceEEecCCEEEEEecCCeEEEEEeC
Confidence 3467788999999331457899997
No 7
>COG1110 Reverse gyrase [DNA replication, recombination, and repair]
Probab=23.84 E-value=1.2e+02 Score=32.11 Aligned_cols=44 Identities=14% Similarity=0.289 Sum_probs=35.1
Q ss_pred EEEEEEeecccChhhHHHHHhcCCC-----ChhHHHHHHHHHHhCCCcC
Q psy5196 130 YKVEIKKAQEISFASIVEFMRTGVN-----RPQIAIQALDVVLREPCSL 173 (252)
Q Consensus 130 ~~v~I~~~~~i~l~~l~~~l~~~~~-----~~~~~iq~Lnivlr~~~~~ 173 (252)
-.-.|+.++++|..+|..++....- -...+++.+|.|||+.+..
T Consensus 972 AHEaIRPtrPid~~eL~~~i~~G~i~~~~~Lt~~HlrvYdLIFrRFmAS 1020 (1187)
T COG1110 972 AHEAIRPTRPIDVEELITLIEEGVIQLPIRLTKNHLRVYDLIFRRFMAS 1020 (1187)
T ss_pred cccccCCCCCCCHHHHHHHHHcCCeeccchhhHHHHHHHHHHHHHHHHh
Confidence 3567899999999999988766544 2456899999999998654
No 8
>KOG2488|consensus
Probab=23.52 E-value=1.5e+02 Score=25.10 Aligned_cols=39 Identities=13% Similarity=0.301 Sum_probs=28.5
Q ss_pred eeeeeecCCCeeEEEeEEEeCCC-CChhhhHHHHHHHHHH
Q psy5196 48 HFAITFKNPNLVIFHYDVAIDPD-KPVRYMRPVMQKVARE 86 (252)
Q Consensus 48 ~f~i~~~~p~~~iy~Y~V~i~P~-~~~~~~r~i~~~l~~~ 86 (252)
+|+...+.....+|.|+|.+.+. ..+.+.+.+++.+...
T Consensus 109 ~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~ 148 (202)
T KOG2488|consen 109 MFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKL 148 (202)
T ss_pred EEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHH
Confidence 57777763457999999999886 4556777777776553
No 9
>PF14699 hGDE_N: N-terminal domain from the human glycogen debranching enzyme
Probab=22.24 E-value=63 Score=23.36 Aligned_cols=16 Identities=25% Similarity=0.248 Sum_probs=14.2
Q ss_pred CCCCCCCCeEEEEeee
Q psy5196 33 KDGGTLGRRTQVDTNH 48 (252)
Q Consensus 33 P~~Gt~G~~i~l~tN~ 48 (252)
++....||.+.|+||+
T Consensus 6 ~g~S~~~r~g~l~tN~ 21 (86)
T PF14699_consen 6 LGASLIGRNGSLWTNY 21 (86)
T ss_pred eCCcccCCceEEEEEC
Confidence 5668899999999999
No 10
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=22.21 E-value=29 Score=24.43 Aligned_cols=9 Identities=44% Similarity=1.361 Sum_probs=6.3
Q ss_pred EEeeeeeee
Q psy5196 201 HLWNGFYQS 209 (252)
Q Consensus 201 E~w~Gf~~S 209 (252)
|.|+|+|+|
T Consensus 1 e~~~G~~tS 9 (80)
T PF09261_consen 1 EYWTGYYTS 9 (80)
T ss_dssp EES-GGGCS
T ss_pred CCcceeeeC
Confidence 678888876
Done!