Your job contains 1 sequence.
>psy5196
MTIASSSSSSSISSAASGAGSKGLYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVI
FHYDVAIDPDKPVRYMRPVMQKVAREYFPNSPCGYDGKKNLFSKGTLPFGTAMNCTVSIF
DEERMKDKEYKVEIKKAQEISFASIVEFMRTGVNRPQIAIQALDVVLREPCSLNANFVRV
GRSYFSPPDPNRLVDLGDGLHLWNGFYQSAGIGWRPYLNVDVAHKGFPEEKSVIKVIDEI
CRGLPPELSDYD
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5196
(252 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0087035 - symbol:AGO2 "Argonaute 2" species:7227 "... 306 6.6e-26 1
ZFIN|ZDB-GENE-030131-5357 - symbol:ago4 "argonaute RISC c... 292 1.2e-24 1
UNIPROTKB|Q4KLV6 - symbol:eif2c4 "Protein argonaute-4" sp... 291 1.6e-24 1
UNIPROTKB|F1MXK6 - symbol:EIF2C4 "Uncharacterized protein... 290 1.9e-24 1
UNIPROTKB|Q9HCK5 - symbol:EIF2C4 "Protein argonaute-4" sp... 290 1.9e-24 1
UNIPROTKB|F1SV64 - symbol:EIF2C4 "Uncharacterized protein... 290 1.9e-24 1
MGI|MGI:1924100 - symbol:Ago4 "argonaute RISC catalytic s... 290 1.9e-24 1
RGD|1304583 - symbol:Ago4 "argonaute RISC catalytic compo... 287 3.5e-24 1
UNIPROTKB|F1LUQ5 - symbol:Eif2c4 "Protein Eif2c4" species... 287 4.0e-24 1
WB|WBGene00000105 - symbol:alg-1 species:6239 "Caenorhabd... 233 4.9e-24 2
UNIPROTKB|D4A2P5 - symbol:Eif2c4 "Protein Eif2c4" species... 287 5.2e-24 1
UNIPROTKB|F1P3Z1 - symbol:EIF2C4 "Protein argonaute-4" sp... 284 8.2e-24 1
UNIPROTKB|Q851R2 - symbol:MEL1 "Protein argonaute MEL1" s... 283 1.5e-23 1
UNIPROTKB|F1PGP5 - symbol:EIF2C1 "Uncharacterized protein... 281 1.8e-23 1
UNIPROTKB|Q9UL18 - symbol:EIF2C1 "Protein argonaute-1" sp... 281 1.8e-23 1
UNIPROTKB|F1SV63 - symbol:EIF2C1 "Uncharacterized protein... 281 1.8e-23 1
MGI|MGI:2446630 - symbol:Ago1 "argonaute RISC catalytic s... 281 1.8e-23 1
RGD|1304619 - symbol:Ago1 "argonaute RISC catalytic compo... 281 1.8e-23 1
UNIPROTKB|F1MXX2 - symbol:EIF2C1 "Uncharacterized protein... 281 1.8e-23 1
UNIPROTKB|Q69VD5 - symbol:PHN1 "Protein argonaute PNH1" s... 278 4.6e-23 1
UNIPROTKB|F1P3Y9 - symbol:EIF2C1 "Uncharacterized protein... 274 9.8e-23 1
WB|WBGene00000106 - symbol:alg-2 species:6239 "Caenorhabd... 260 3.5e-21 1
FB|FBgn0262739 - symbol:AGO1 "Argonaute-1" species:7227 "... 255 1.3e-20 1
TAIR|locus:2057851 - symbol:AGO5 "ARGONAUTE 5" species:37... 251 3.7e-20 1
TAIR|locus:2170897 - symbol:AGO10 "ARGONAUTE 10" species:... 249 5.9e-20 1
UNIPROTKB|Q6T5B7 - symbol:EIF2C3 "Protein argonaute-3" sp... 232 3.1e-18 1
UNIPROTKB|Q6DCX2 - symbol:eif2c2 "Protein argonaute-2" sp... 232 3.2e-18 1
MGI|MGI:2446632 - symbol:Ago2 "argonaute RISC catalytic s... 230 5.1e-18 1
RGD|621255 - symbol:Ago2 "argonaute RISC catalytic compon... 230 5.1e-18 1
UNIPROTKB|O77503 - symbol:EIF2C2 "Protein argonaute-2" sp... 229 6.3e-18 1
UNIPROTKB|Q9UKV8 - symbol:EIF2C2 "Protein argonaute-2" sp... 229 6.6e-18 1
UNIPROTKB|B0JYP5 - symbol:EIF2C2 "Protein argonaute-2" sp... 229 6.6e-18 1
UNIPROTKB|Q6QME8 - symbol:EIF2C2 "Protein argonaute-2" sp... 229 6.6e-18 1
UNIPROTKB|F1P3Z0 - symbol:EIF2C3 "Protein argonaute-3" sp... 228 8.4e-18 1
UNIPROTKB|Q5ZLG4 - symbol:EIF2C3 "Protein argonaute-3" sp... 228 8.4e-18 1
UNIPROTKB|F1MG44 - symbol:EIF2C3 "Protein argonaute-3" sp... 228 8.4e-18 1
UNIPROTKB|E2R0U1 - symbol:EIF2C3 "Uncharacterized protein... 228 8.4e-18 1
UNIPROTKB|Q9H9G7 - symbol:EIF2C3 "Protein argonaute-3" sp... 228 8.4e-18 1
MGI|MGI:2446634 - symbol:Ago3 "argonaute RISC catalytic s... 228 8.4e-18 1
UNIPROTKB|Q6DJB9 - symbol:eif2c2 "Protein argonaute-2" sp... 226 1.4e-17 1
UNIPROTKB|F1LZ24 - symbol:Eif2c3 "Protein Eif2c3" species... 224 1.8e-17 1
UNIPROTKB|F1LUS2 - symbol:Eif2c3 "Protein Eif2c3" species... 224 2.2e-17 1
UNIPROTKB|F1NL39 - symbol:LOC100858102 "Uncharacterized p... 224 2.2e-17 1
ZFIN|ZDB-GENE-060503-452 - symbol:ago3b "argonaute RISC c... 224 2.3e-17 1
UNIPROTKB|Q5TA56 - symbol:EIF2C3 "Protein argonaute-3" sp... 209 5.3e-17 1
UNIPROTKB|F1PQZ7 - symbol:EIF2C2 "Uncharacterized protein... 207 1.4e-15 1
UNIPROTKB|E1C5I5 - symbol:EIF2C4 "Protein argonaute-4" sp... 206 1.7e-15 1
UNIPROTKB|Q5ZMW0 - symbol:EIF2C4 "Protein argonaute-4" sp... 206 1.7e-15 1
UNIPROTKB|Q5TA58 - symbol:EIF2C1 "Protein argonaute-1" sp... 205 2.1e-15 1
UNIPROTKB|F1PGN2 - symbol:EIF2C4 "Uncharacterized protein... 203 3.5e-15 1
TAIR|locus:2197545 - symbol:AGO2 "argonaute 2" species:37... 183 6.9e-13 1
UNIPROTKB|F1RSJ1 - symbol:EIF2C2 "Uncharacterized protein... 169 3.6e-11 1
TAIR|locus:2197550 - symbol:AGO3 "ARGONAUTE 3" species:37... 170 4.1e-11 1
UNIPROTKB|Q75HC2 - symbol:AGO7 "Protein argonaute 7" spec... 110 4.4e-10 2
POMBASE|SPCC736.11 - symbol:ago1 "argonaute" species:4896... 163 8.7e-10 1
TAIR|locus:2059258 - symbol:AGO4 "ARGONAUTE 4" species:37... 122 1.5e-08 2
TAIR|locus:2179008 - symbol:AGO9 "ARGONAUTE 9" species:37... 123 2.8e-08 2
WB|WBGene00006449 - symbol:tag-76 species:6239 "Caenorhab... 146 2.2e-07 1
WB|WBGene00011910 - symbol:T22B3.2b species:6239 "Caenorh... 143 5.1e-07 1
TAIR|locus:2147072 - symbol:AT5G21030 species:3702 "Arabi... 123 9.2e-05 1
TAIR|locus:2059370 - symbol:AGO6 "ARGONAUTE 6" species:37... 99 0.00015 2
>FB|FBgn0087035 [details] [associations]
symbol:AGO2 "Argonaute 2" species:7227 "Drosophila
melanogaster" [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0030422 "production of siRNA involved in RNA interference"
evidence=IMP;IDA] [GO:0016442 "RNA-induced silencing complex"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=TAS] [GO:0016246 "RNA interference"
evidence=IDA;NAS;IMP;TAS] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0035197 "siRNA binding" evidence=IDA]
[GO:0035087 "siRNA loading onto RISC involved in RNA interference"
evidence=IDA;IMP] [GO:0035190 "syncytial nuclear migration"
evidence=IMP] [GO:0007349 "cellularization" evidence=IMP]
[GO:0007279 "pole cell formation" evidence=IMP] [GO:0004521
"endoribonuclease activity" evidence=IDA] [GO:0035195 "gene
silencing by miRNA" evidence=IMP] [GO:0051607 "defense response to
virus" evidence=IMP] [GO:0033227 "dsRNA transport" evidence=IMP]
[GO:0007367 "segment polarity determination" evidence=IGI]
[GO:0070578 "RISC-loading complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0045071 "negative regulation of viral
genome replication" evidence=IMP] [GO:0070868 "heterochromatin
organization involved in chromatin silencing" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0005737 GO:GO:0019048 EMBL:AE014296
GO:GO:0051607 GO:GO:0045071 SUPFAM:SSF53098 eggNOG:NOG279895
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 GO:GO:0016442 EMBL:BT003546 EMBL:BT099682
EMBL:DQ228766 EMBL:DQ228767 EMBL:DQ228768 EMBL:DQ228769
EMBL:DQ228770 EMBL:DQ228771 EMBL:DQ228772 EMBL:DQ228773
EMBL:AY094751 RefSeq:NP_648775.1 RefSeq:NP_730054.1 UniGene:Dm.9677
PDB:1R6Z PDB:1T2R PDB:1T2S PDB:1VYN PDB:3MJ0 PDBsum:1R6Z
PDBsum:1T2R PDBsum:1T2S PDBsum:1VYN PDBsum:3MJ0
ProteinModelPortal:Q9VUQ5 SMR:Q9VUQ5 DIP:DIP-41570N IntAct:Q9VUQ5
MINT:MINT-248245 STRING:Q9VUQ5 PaxDb:Q9VUQ5
EnsemblMetazoa:FBtr0075559 GeneID:39683 KEGG:dme:Dmel_CG7439
CTD:39683 FlyBase:FBgn0087035 GeneTree:ENSGT00640000091312
InParanoid:Q9VUQ5 OMA:QGRQGQE OrthoDB:EOG47D7X0
EvolutionaryTrace:Q9VUQ5 GenomeRNAi:39683 NextBio:814859
Bgee:Q9VUQ5 GermOnline:CG7439 GO:GO:0070578 GO:GO:0004521
GO:GO:0033227 GO:GO:0070868 GO:GO:0007279 GO:GO:0030422
GO:GO:0035071 GO:GO:0007367 GO:GO:0035087 GO:GO:0035190
GO:GO:0030423 Uniprot:Q9VUQ5
Length = 1214
Score = 306 (112.8 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 68/206 (33%), Positives = 110/206 (53%)
Query: 36 GTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDKPVRYMRPVMQKVAREYFPNSPCGY 95
GT+G+ QV N+ + V +HYDV I P++P ++ R ++ + + Y
Sbjct: 408 GTIGKPGQVGINYLDLDLSKMPSVAYHYDVKIMPERPKKFYRQAFEQFRVDQLGGAVLAY 467
Query: 96 DGKKNLFSKGTLPFGTAMNCTVSIFDEERMKDKEYKVEIKKAQE--ISFASIVEFMRTGV 153
DGK + +S LP + N V++ D + Y +EIK+ + I S+ +M +
Sbjct: 468 DGKASCYSVDKLPLNS-QNPEVTVTDRNG-RTLRYTIEIKETGDSTIDLKSLTTYMNDRI 525
Query: 154 -NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGFYQSAGI 212
++P A+Q ++VVL PC A +RVGRS+F DPN +L DG G YQ+ +
Sbjct: 526 FDKPMRAMQCVEVVLASPCHNKA--IRVGRSFFKMSDPNNRHELDDGYEALVGLYQAFML 583
Query: 213 GWRPYLNVDVAHKGFPEEKSVIKVID 238
G RP+LNVD++HK FP +I+ ++
Sbjct: 584 GDRPFLNVDISHKSFPISMPMIEYLE 609
>ZFIN|ZDB-GENE-030131-5357 [details] [associations]
symbol:ago4 "argonaute RISC catalytic component 4"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950
ZFIN:ZDB-GENE-030131-5357 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:CABZ01005377 EMBL:CABZ01005378
EMBL:CABZ01005379 IPI:IPI00996534 Ensembl:ENSDART00000129463
Bgee:E7F814 Uniprot:E7F814
Length = 874
Score = 292 (107.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 75/225 (33%), Positives = 123/225 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GT+G+ ++ NHF + P + ++HYD+ I P+K P R R V+
Sbjct: 14 LFQPPRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDIDIKPEKRPRRVNREVVDT 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
+ R + F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++
Sbjct: 70 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEG--KDQTFKVSLQWV 127
Query: 138 QEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++E + +N P+ ++QALDV+ R S+ + VGRS+FSPP+ L
Sbjct: 128 SVVSLQMLLEALSGHLNEVPEDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPL 184
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W LN+DV+ F + VI+ + E+
Sbjct: 185 GGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEV 229
>UNIPROTKB|Q4KLV6 [details] [associations]
symbol:eif2c4 "Protein argonaute-4" species:8355 "Xenopus
laevis" [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0003723 SUPFAM:SSF53098 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0035278
HSSP:Q9UL18 GO:GO:0006402 CTD:192670 EMBL:BC098982
RefSeq:NP_001089574.1 UniGene:Xl.79902 ProteinModelPortal:Q4KLV6
SMR:Q4KLV6 GeneID:734630 KEGG:xla:734630 Xenbase:XB-GENE-1006885
Uniprot:Q4KLV6
Length = 884
Score = 291 (107.5 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 79/226 (34%), Positives = 123/226 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GTLG+ ++ NHF + P + ++HYDV I P+K P R R V+
Sbjct: 35 LFQPPRRPGL--GTLGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDT 90
Query: 83 VAREY-FP----NSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKK 136
+ R + P N P GYDGK+N+++ LP G ++ V++ E KD+ +KV I+
Sbjct: 91 MVRHFKMPIFGDNQP-GYDGKRNMYTAHPLPIGRDRVDLEVTLPGEG--KDQTFKVTIQW 147
Query: 137 AQEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD 195
+S ++E + ++ P ++QALDV+ R S+ + VGRS+FSPP+
Sbjct: 148 VSVVSLQLLLEALSGHLSEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHP 204
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W LN+DV+ F + VI+ + E+
Sbjct: 205 LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEV 250
>UNIPROTKB|F1MXK6 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:DAAA02009205
IPI:IPI01001804 Ensembl:ENSBTAT00000020250 Uniprot:F1MXK6
Length = 850
Score = 290 (107.1 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 75/225 (33%), Positives = 122/225 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GT+G+ ++ NHF + P + ++HYDV I P+K P R R V+
Sbjct: 11 LFQPPRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDT 66
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
+ R + F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++
Sbjct: 67 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSVQWV 124
Query: 138 QEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++E + +N P ++QALDV+ R S+ + VGRS+FSPP+ L
Sbjct: 125 SVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPL 181
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W LN+DV+ F + +I+ + E+
Sbjct: 182 GGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEV 226
>UNIPROTKB|Q9HCK5 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IDA] [GO:0035278 "negative regulation
of translation involved in gene silencing by miRNA" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467
EMBL:CH471059 GO:GO:0007219 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 OMA:ENDILRT
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0035278 GO:GO:0006402 CTD:192670
EMBL:AB046787 EMBL:AL359186 EMBL:AL354864 EMBL:BC152450
IPI:IPI00030602 RefSeq:NP_060099.2 UniGene:Hs.471492
ProteinModelPortal:Q9HCK5 SMR:Q9HCK5 IntAct:Q9HCK5 STRING:Q9HCK5
PhosphoSite:Q9HCK5 DMDM:38372393 PaxDb:Q9HCK5 PRIDE:Q9HCK5
DNASU:192670 Ensembl:ENST00000373210 GeneID:192670 KEGG:hsa:192670
UCSC:uc001bzj.2 GeneCards:GC01P036273 HGNC:HGNC:18424 HPA:CAB012179
MIM:607356 neXtProt:NX_Q9HCK5 PharmGKB:PA38330 InParanoid:Q9HCK5
PhylomeDB:Q9HCK5 GenomeRNAi:192670 NextBio:89373
ArrayExpress:Q9HCK5 Bgee:Q9HCK5 CleanEx:HS_EIF2C4
Genevestigator:Q9HCK5 GermOnline:ENSG00000134698 Uniprot:Q9HCK5
Length = 861
Score = 290 (107.1 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 75/225 (33%), Positives = 122/225 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GT+G+ ++ NHF + P + ++HYDV I P+K P R R V+
Sbjct: 12 LFQPPRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDT 67
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
+ R + F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++
Sbjct: 68 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSVQWV 125
Query: 138 QEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++E + +N P ++QALDV+ R S+ + VGRS+FSPP+ L
Sbjct: 126 SVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPL 182
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W LN+DV+ F + +I+ + E+
Sbjct: 183 GGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEV 227
>UNIPROTKB|F1SV64 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:CU929817
Ensembl:ENSSSCT00000004025 Uniprot:F1SV64
Length = 861
Score = 290 (107.1 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 75/225 (33%), Positives = 122/225 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GT+G+ ++ NHF + P + ++HYDV I P+K P R R V+
Sbjct: 12 LFQPPRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDT 67
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
+ R + F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++
Sbjct: 68 MVRHFKIQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSVQWV 125
Query: 138 QEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++E + +N P ++QALDV+ R S+ + VGRS+FSPP+ L
Sbjct: 126 SVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPL 182
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W LN+DV+ F + +I+ + E+
Sbjct: 183 GGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEV 227
>MGI|MGI:1924100 [details] [associations]
symbol:Ago4 "argonaute RISC catalytic subunit 4"
species:10090 "Mus musculus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:1924100
GO:GO:0003723 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 EMBL:AL606935 GeneTree:ENSGT00640000091310
GO:GO:0006402 CTD:192670 EMBL:AB081474 EMBL:AK030018 EMBL:BC096023
EMBL:AK129395 IPI:IPI00622422 IPI:IPI00762672 RefSeq:NP_694817.2
UniGene:Mm.86705 ProteinModelPortal:Q8CJF8 SMR:Q8CJF8 STRING:Q8CJF8
PhosphoSite:Q8CJF8 PaxDb:Q8CJF8 PRIDE:Q8CJF8
Ensembl:ENSMUST00000084289 GeneID:76850 KEGG:mmu:76850
UCSC:uc008utk.2 NextBio:345923 Bgee:Q8CJF8 Genevestigator:Q8CJF8
GermOnline:ENSMUSG00000042500 Uniprot:Q8CJF8
Length = 861
Score = 290 (107.1 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 75/225 (33%), Positives = 122/225 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GT+G+ ++ NHF + P + ++HYDV I P+K P R R V+
Sbjct: 12 LFQPPRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDT 67
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
+ R + F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++
Sbjct: 68 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRIDMEVTLPGEG--KDQTFKVSVQWV 125
Query: 138 QEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++E + +N P ++QALDV+ R S+ + VGRS+FSPP+ L
Sbjct: 126 SVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPL 182
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W LN+DV+ F + +I+ + E+
Sbjct: 183 GGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEV 227
>RGD|1304583 [details] [associations]
symbol:Ago4 "argonaute RISC catalytic component 4" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006402 "mRNA catabolic process" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISO] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:1304583
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 IPI:IPI00390206 Ensembl:ENSRNOT00000035394
Uniprot:F1LVZ1
Length = 798
Score = 287 (106.1 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 74/225 (32%), Positives = 123/225 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GT+G+ ++ NHF + P + ++HYDV I P+K P R R V+
Sbjct: 11 LFQPPRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDT 66
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
+ R + F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++
Sbjct: 67 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSVQWV 124
Query: 138 QEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++E + ++ P ++QALDV+ R S+ + VGRS+FSPP+ L
Sbjct: 125 SVVSLQLLLEALAGHLSEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPL 181
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W+ LN+DV+ F + +I+ + E+
Sbjct: 182 GGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYRAQPIIEFMCEV 226
>UNIPROTKB|F1LUQ5 [details] [associations]
symbol:Eif2c4 "Protein Eif2c4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1304583 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 IPI:IPI00359347
Ensembl:ENSRNOT00000035373 Uniprot:F1LUQ5
Length = 860
Score = 287 (106.1 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 74/225 (32%), Positives = 123/225 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GT+G+ ++ NHF + P + ++HYDV I P+K P R R V+
Sbjct: 11 LFQPPRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDT 66
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
+ R + F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++
Sbjct: 67 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSVQWV 124
Query: 138 QEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++E + ++ P ++QALDV+ R S+ + VGRS+FSPP+ L
Sbjct: 125 SVVSLQLLLEALAGHLSEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPL 181
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W+ LN+DV+ F + +I+ + E+
Sbjct: 182 GGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYRAQPIIEFMCEV 226
>WB|WBGene00000105 [details] [associations]
symbol:alg-1 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IGI;IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IGI]
[GO:0040025 "vulval development" evidence=IMP] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IPI]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=IPI]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0009792 GO:GO:0002009
GO:GO:0040010 GO:GO:0018996 GO:GO:0040011 GO:GO:0040018
GO:GO:0040035 GO:GO:0007281 SUPFAM:SSF53098 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932
GO:GO:0035068 GeneTree:ENSGT00640000091312 OMA:IKLEAEY
GO:GO:0040025 EMBL:Z69661 EMBL:Z69663 RefSeq:NP_001257239.1
ProteinModelPortal:G5EES3 SMR:G5EES3 EnsemblMetazoa:F48F7.1b
GeneID:181504 KEGG:cel:CELE_F48F7.1 CTD:181504 WormBase:F48F7.1b
Uniprot:G5EES3
Length = 1023
Score = 233 (87.1 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 61/173 (35%), Positives = 95/173 (54%)
Query: 25 YQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQ-- 81
+Q PRR N G GR + NHFA+ P I HY V + PDK P R R ++
Sbjct: 157 FQCPRRPNH--GVEGRSILLRANHFAVRI--PGGTIQHYQVDVTPDKCPRRVNREIISCL 212
Query: 82 -KVAREYFPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKAQE 139
+YF N YDGK+N++++ LP G M+ V++ + + ++++ V +K +
Sbjct: 213 ISAFSKYFTNIRPVYDGKRNMYTREPLPIGRERMDFDVTLPGDSAV-ERQFSVSLKWVGQ 271
Query: 140 ISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPN 191
+S +++ + M V + P A+QA+DV+LR SL + VGRS+FSPP PN
Sbjct: 272 VSLSTLEDAMEGRVRQVPFEAVQAMDVILRHLPSLK--YTPVGRSFFSPPVPN 322
Score = 82 (33.9 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEICRGLP 245
LG G +W GF+QS W+ LN+DV+ F VI+ I E+ LP
Sbjct: 355 LGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRSMPVIEFIAEVLE-LP 404
>UNIPROTKB|D4A2P5 [details] [associations]
symbol:Eif2c4 "Protein Eif2c4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 RGD:1304583 GO:GO:0003723 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0035068 GO:GO:0035278 GO:GO:0006402 IPI:IPI00950544
Ensembl:ENSRNOT00000066541 Uniprot:D4A2P5
Length = 995
Score = 287 (106.1 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 74/225 (32%), Positives = 123/225 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+Q PRR GT+G+ ++ NHF + P + ++HYDV I P+K P R R V+
Sbjct: 12 LFQPPRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDT 67
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
+ R + F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++
Sbjct: 68 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSVQWV 125
Query: 138 QEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++E + ++ P ++QALDV+ R S+ + VGRS+FSPP+ L
Sbjct: 126 SVVSLQLLLEALAGHLSEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPL 182
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W+ LN+DV+ F + +I+ + E+
Sbjct: 183 GGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYRAQPIIEFMCEV 227
>UNIPROTKB|F1P3Z1 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006402
"mRNA catabolic process" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 IPI:IPI00735148
EMBL:AADN02043839 EMBL:AADN02043840 EMBL:AADN02043841
Ensembl:ENSGALT00000003521 ArrayExpress:F1P3Z1 Uniprot:F1P3Z1
Length = 847
Score = 284 (105.0 bits), Expect = 8.2e-24, P = 8.2e-24
Identities = 74/221 (33%), Positives = 120/221 (54%)
Query: 28 PRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVARE 86
PRR GT+G+ ++ NHF + P + ++HYDV I P+K P R R V+ + R
Sbjct: 2 PRRPGL--GTVGKPIRLLANHFQVQI--PKIDVYHYDVDIKPEKRPRRVNREVVDTMVRH 57
Query: 87 Y----FPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEIS 141
+ F + GYDGK+N+++ LP G ++ V++ E KD+ +KV I+ +S
Sbjct: 58 FKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSIQWVSVVS 115
Query: 142 FASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGL 200
++E + +N P+ ++QALDV+ R S+ + VGRS+FSPP+ LG G
Sbjct: 116 LQLLLEALAGHLNEVPEDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPLGGGR 172
Query: 201 HLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+W GF+QS W LN+DV+ F + +I+ + E+
Sbjct: 173 EVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEV 213
>UNIPROTKB|Q851R2 [details] [associations]
symbol:MEL1 "Protein argonaute MEL1" species:39947 "Oryza
sativa Japonica Group" [GO:0005730 "nucleolus" evidence=IMP]
[GO:0005731 "nucleolus organizer region" evidence=IMP] [GO:0005737
"cytoplasm" evidence=RCA] [GO:0007140 "male meiosis" evidence=IMP]
[GO:0007143 "female meiosis" evidence=IMP] [GO:0009561
"megagametogenesis" evidence=IMP] [GO:0033169 "histone H3-K9
demethylation" evidence=IDA] [GO:0035197 "siRNA binding"
evidence=ISS] [GO:0055046 "microgametogenesis" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:DP000009 EMBL:AP008209
GO:GO:0007143 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
KO:K11596 GO:GO:0035197 HSSP:Q9UL18 OMA:AREGPVE GO:GO:0005731
GO:GO:0033169 GO:GO:0007140 GO:GO:0009561 GO:GO:0055046
EMBL:AB297928 EMBL:AC104321 RefSeq:NP_001051583.2 UniGene:Os.80058
ProteinModelPortal:Q851R2 EnsemblPlants:LOC_Os03g58600.1
GeneID:4334449 KEGG:dosa:Os02t0616300-00 KEGG:dosa:Os03t0789466-00
KEGG:dosa:Os03t0800200-00 KEGG:osa:4334449 Gramene:Q851R2
ProtClustDB:CLSN2694409 Uniprot:Q851R2
Length = 1058
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 84/234 (35%), Positives = 126/234 (53%)
Query: 36 GTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDKPVRYM-RPVMQKVAREYFPNSPCG 94
G G++ + NHF + + NL FHYDV+I+P+ R R V+ ++ + + S G
Sbjct: 206 GAAGKKVMIRANHFLVNVADNNL--FHYDVSINPESKSRATNREVLNELIKLHGKTSLGG 263
Query: 95 ----YDGKKNLFSKGTLPFGTAMNCTVSIFDEERMKDKE-----YKVEIKKAQEISFASI 145
YDG+K+L++ G+LPF + V + D E+ KDKE YK+ I+ A +
Sbjct: 264 KLPAYDGRKSLYTAGSLPFESE-EFVVKLIDPEK-KDKERAEREYKITIRIAGRTDLYHL 321
Query: 146 VEFMRTGVNR--PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLW 203
+F+ G R PQ IQ LDVVLRE S + N+V V RS+FS +R D+G+GL W
Sbjct: 322 QQFL-LGRQRDMPQETIQVLDVVLRE--SPSWNYVTVSRSFFSTQFGHR-GDIGEGLECW 377
Query: 204 NGFYQS---AGIGWRPYLNVDVAHKGFPEEKSVIKVIDEIC--RGLPPELSDYD 252
G+YQS +G LN+D++ F + +VI+ ++E R LSD D
Sbjct: 378 RGYYQSLRPTQMGLS--LNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRD 429
>UNIPROTKB|F1PGP5 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 CTD:26523
GeneTree:ENSGT00640000091310 EMBL:AAEX03009640 EMBL:AAEX03009639
RefSeq:XP_532563.3 ProteinModelPortal:F1PGP5
Ensembl:ENSCAFT00000005625 GeneID:475337 KEGG:cfa:475337
OMA:XGEGSHI Uniprot:F1PGP5
Length = 857
Score = 281 (104.0 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 77/226 (34%), Positives = 125/226 (55%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
++Q PRR GT+G+ ++ N+F + P + ++HY+V I PDK P R R V++
Sbjct: 20 VFQAPRRPGI--GTVGKPIKLLANYFEVDI--PKIDVYHYEVDIKPDKCPRRVNREVVEY 75
Query: 83 VAREYFPN-----SPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKK 136
+ + + P P YDGKKN+++ LP G ++ V+I E KD+ +KV IK
Sbjct: 76 MVQHFKPQIFGDRKPV-YDGKKNIYTVTALPIGNERVDFEVTIPGEG--KDRIFKVSIKW 132
Query: 137 AQEISFASIVEFMRTG-VNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD 195
+S+ + E + +G + P ++QALDV +R S+ + VGRS+FSPP+
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR--YTPVGRSFFSPPE-GYYHP 189
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 190 LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEV 235
>UNIPROTKB|Q9UL18 [details] [associations]
symbol:EIF2C1 "Protein argonaute-1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=IDA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005844 "polysome" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467
GO:GO:0006355 GO:GO:0007219 GO:GO:0006351 GO:GO:0003723
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AF093097
EMBL:AL139286 EMBL:BC063275 IPI:IPI00007736 RefSeq:NP_036331.1
UniGene:Hs.22867 PDB:1SI2 PDB:1SI3 PDBsum:1SI2 PDBsum:1SI3
ProteinModelPortal:Q9UL18 SMR:Q9UL18 DIP:DIP-29193N IntAct:Q9UL18
STRING:Q9UL18 PhosphoSite:Q9UL18 DMDM:88984241 PaxDb:Q9UL18
PRIDE:Q9UL18 Ensembl:ENST00000373204 GeneID:26523 KEGG:hsa:26523
UCSC:uc001bzk.3 CTD:26523 GeneCards:GC01P036335 HGNC:HGNC:3262
MIM:606228 neXtProt:NX_Q9UL18 PharmGKB:PA27693 InParanoid:Q9UL18
OMA:NNLVKRA OrthoDB:EOG4229J0 PhylomeDB:Q9UL18 ChiTaRS:EIF2C1
EvolutionaryTrace:Q9UL18 GenomeRNAi:26523 NextBio:48846
ArrayExpress:Q9UL18 Bgee:Q9UL18 CleanEx:HS_EIF2C1
Genevestigator:Q9UL18 GermOnline:ENSG00000092847 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0000956
Uniprot:Q9UL18
Length = 857
Score = 281 (104.0 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 77/226 (34%), Positives = 125/226 (55%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
++Q PRR GT+G+ ++ N+F + P + ++HY+V I PDK P R R V++
Sbjct: 20 VFQAPRRPGI--GTVGKPIKLLANYFEVDI--PKIDVYHYEVDIKPDKCPRRVNREVVEY 75
Query: 83 VAREYFPN-----SPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKK 136
+ + + P P YDGKKN+++ LP G ++ V+I E KD+ +KV IK
Sbjct: 76 MVQHFKPQIFGDRKPV-YDGKKNIYTVTALPIGNERVDFEVTIPGEG--KDRIFKVSIKW 132
Query: 137 AQEISFASIVEFMRTG-VNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD 195
+S+ + E + +G + P ++QALDV +R S+ + VGRS+FSPP+
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR--YTPVGRSFFSPPE-GYYHP 189
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 190 LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEV 235
>UNIPROTKB|F1SV63 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0005844 GO:GO:0035278 GO:GO:0000956
GeneTree:ENSGT00640000091310 OMA:XGEGSHI EMBL:AEMK01190523
EMBL:CU929817 ProteinModelPortal:F1SV63 SMR:F1SV63 PRIDE:F1SV63
Ensembl:ENSSSCT00000004026 Uniprot:F1SV63
Length = 857
Score = 281 (104.0 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 77/226 (34%), Positives = 125/226 (55%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
++Q PRR GT+G+ ++ N+F + P + ++HY+V I PDK P R R V++
Sbjct: 20 VFQAPRRPGI--GTVGKPIKLLANYFEVDI--PKIDVYHYEVDIKPDKCPRRVNREVVEY 75
Query: 83 VAREYFPN-----SPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKK 136
+ + + P P YDGKKN+++ LP G ++ V+I E KD+ +KV IK
Sbjct: 76 MVQHFKPQIFGDRKPV-YDGKKNIYTVTALPIGNERVDFEVTIPGEG--KDRIFKVSIKW 132
Query: 137 AQEISFASIVEFMRTG-VNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD 195
+S+ + E + +G + P ++QALDV +R S+ + VGRS+FSPP+
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR--YTPVGRSFFSPPE-GYYHP 189
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 190 LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEV 235
>MGI|MGI:2446630 [details] [associations]
symbol:Ago1 "argonaute RISC catalytic subunit 1"
species:10090 "Mus musculus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005844 "polysome" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISO;IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446630
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 CTD:26523 OMA:NNLVKRA
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068 GO:GO:0005844
GO:GO:0035278 GO:GO:0000956 EMBL:AB081471 EMBL:AL606935
EMBL:AL606976 EMBL:BC129914 IPI:IPI00943422 RefSeq:NP_700452.2
UniGene:Mm.30800 ProteinModelPortal:Q8CJG1 SMR:Q8CJG1 IntAct:Q8CJG1
STRING:Q8CJG1 PhosphoSite:Q8CJG1 PaxDb:Q8CJG1 PRIDE:Q8CJG1
Ensembl:ENSMUST00000097888 GeneID:236511 KEGG:mmu:236511
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 InParanoid:A1L365
NextBio:382987 Bgee:Q8CJG1 CleanEx:MM_EIF2C1 Genevestigator:Q8CJG1
Uniprot:Q8CJG1
Length = 857
Score = 281 (104.0 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 77/226 (34%), Positives = 125/226 (55%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
++Q PRR GT+G+ ++ N+F + P + ++HY+V I PDK P R R V++
Sbjct: 20 VFQAPRRPGI--GTVGKPIKLLANYFEVDI--PKIDVYHYEVDIKPDKCPRRVNREVVEY 75
Query: 83 VAREYFPN-----SPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKK 136
+ + + P P YDGKKN+++ LP G ++ V+I E KD+ +KV IK
Sbjct: 76 MVQHFKPQIFGDRKPV-YDGKKNIYTVTALPIGNERVDFEVTIPGEG--KDRIFKVSIKW 132
Query: 137 AQEISFASIVEFMRTG-VNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD 195
+S+ + E + +G + P ++QALDV +R S+ + VGRS+FSPP+
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR--YTPVGRSFFSPPE-GYYHP 189
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 190 LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEV 235
>RGD|1304619 [details] [associations]
symbol:Ago1 "argonaute RISC catalytic component 1" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005844 "polysome" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA;ISO] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA;ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:1304619
GO:GO:0005737 GO:GO:0003723 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 CTD:26523
OMA:NNLVKRA OrthoDB:EOG4229J0 GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 IPI:IPI00359345
RefSeq:NP_001178694.1 UniGene:Rn.62413 Ensembl:ENSRNOT00000037728
GeneID:313594 KEGG:rno:313594 UCSC:RGD:1304619 NextBio:666514
Uniprot:D4AC38
Length = 857
Score = 281 (104.0 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 77/226 (34%), Positives = 125/226 (55%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
++Q PRR GT+G+ ++ N+F + P + ++HY+V I PDK P R R V++
Sbjct: 20 VFQAPRRPGI--GTVGKPIKLLANYFEVDI--PKIDVYHYEVDIKPDKCPRRVNREVVEY 75
Query: 83 VAREYFPN-----SPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKK 136
+ + + P P YDGKKN+++ LP G ++ V+I E KD+ +KV IK
Sbjct: 76 MVQHFKPQIFGDRKPV-YDGKKNIYTVTALPIGNERVDFEVTIPGEG--KDRIFKVSIKW 132
Query: 137 AQEISFASIVEFMRTG-VNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD 195
+S+ + E + +G + P ++QALDV +R S+ + VGRS+FSPP+
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR--YTPVGRSFFSPPE-GYYHP 189
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 190 LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEV 235
>UNIPROTKB|F1MXX2 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OMA:NNLVKRA GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 EMBL:DAAA02009205
IPI:IPI00686174 Ensembl:ENSBTAT00000016254 Uniprot:F1MXX2
Length = 877
Score = 281 (104.0 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 77/226 (34%), Positives = 125/226 (55%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
++Q PRR GT+G+ ++ N+F + P + ++HY+V I PDK P R R V++
Sbjct: 40 VFQAPRRPGI--GTVGKPIKLLANYFEVDI--PKIDVYHYEVDIKPDKCPRRVNREVVEY 95
Query: 83 VAREYFPN-----SPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKK 136
+ + + P P YDGKKN+++ LP G ++ V+I E KD+ +KV IK
Sbjct: 96 MVQHFKPQIFGDRKPV-YDGKKNIYTVTALPIGNERVDFEVTIPGEG--KDRIFKVSIKW 152
Query: 137 AQEISFASIVEFMRTG-VNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD 195
+S+ + E + +G + P ++QALDV +R S+ + VGRS+FSPP+
Sbjct: 153 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR--YTPVGRSFFSPPE-GYYHP 209
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 210 LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEV 255
>UNIPROTKB|Q69VD5 [details] [associations]
symbol:PHN1 "Protein argonaute PNH1" species:39947 "Oryza
sativa Japonica Group" [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0019827
"stem cell maintenance" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
EMBL:AP008212 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
GO:GO:0031047 GO:GO:0048366 GO:GO:0010586 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0003743 HSSP:Q9UL18
GO:GO:0019827 EMBL:AB081950 EMBL:AP004236 ProteinModelPortal:Q69VD5
KEGG:dosa:Os06t0597400-00 Gramene:Q69VD5 Uniprot:Q69VD5
Length = 979
Score = 278 (102.9 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 79/219 (36%), Positives = 116/219 (52%)
Query: 36 GTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDKPVRYM-RPVMQKVAREYFPNSPCG 94
GT+G R V NHF + +L YDV I P+ R + R +M ++ R Y + G
Sbjct: 131 GTVGARCVVKANHFLAELPDKDLT--QYDVKITPEVSSRSVNRAIMSELVRLYHDSDLGG 188
Query: 95 ----YDGKKNLFSKGTLPFGTAMNCTVSIFDEER-----MKDKEYKVEIKKAQEISFASI 145
YDG+KNL++ GTLPF A V + D++ +++EY+V IK A +
Sbjct: 189 RLPAYDGRKNLYTAGTLPFD-AREFVVRLTDDDDGTGVPPREREYRVAIKFAARADLHHL 247
Query: 146 VEFMR-TGVNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWN 204
+F+ + PQ A+Q LD+VLRE N +V +GRS++SP D + LGDGL W
Sbjct: 248 RQFIAGRQADAPQEALQVLDIVLRELA--NRRYVSIGRSFYSP-DIRKPQRLGDGLQSWC 304
Query: 205 GFYQS---AGIGWRPYLNVDVAHKGFPEEKSVIKVIDEI 240
GFYQS +G LN+D++ F E VI+ + +I
Sbjct: 305 GFYQSIRPTQMGLS--LNIDMSSTAFIEPLPVIEFVAQI 341
>UNIPROTKB|F1P3Y9 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005844 "polysome" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OMA:NNLVKRA GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 EMBL:AADN02043843
EMBL:AADN02043844 IPI:IPI00597606 Ensembl:ENSGALT00000003529
Uniprot:F1P3Y9
Length = 853
Score = 274 (101.5 bits), Expect = 9.8e-23, P = 9.8e-23
Identities = 77/226 (34%), Positives = 123/226 (54%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L PRR GT+G+ ++ N+F + P + ++HY+V I PDK P R R V++
Sbjct: 14 LLTAPRRPGI--GTVGKPIKLLANYFEVDI--PKIDVYHYEVDIKPDKCPRRVNREVVEY 69
Query: 83 VAREYFPN-----SPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKK 136
+ + + P P YDGKKN+++ LP G ++ V+I E KD+ +KV IK
Sbjct: 70 MVQHFKPQIFGDRKPV-YDGKKNIYTVTALPIGNERVDFEVTIPGEG--KDRIFKVSIKW 126
Query: 137 AQEISFASIVEFMRTG-VNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD 195
+S+ + E + +G + P ++QALDV +R S+ + VGRS+FSPP+
Sbjct: 127 MAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR--YTPVGRSFFSPPE-GYYHP 183
Query: 196 LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 184 LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEV 229
>WB|WBGene00000106 [details] [associations]
symbol:alg-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009790 "embryo development" evidence=IGI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0035198 "miRNA binding"
evidence=IPI] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IPI] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0035068
GeneTree:ENSGT00640000091312 EMBL:FO081675 CTD:3355106
RefSeq:NP_871992.1 ProteinModelPortal:O16720 SMR:O16720
IntAct:O16720 STRING:O16720 PaxDb:O16720 EnsemblMetazoa:T07D3.7a
GeneID:173468 KEGG:cel:CELE_T07D3.7 UCSC:T07D3.7a WormBase:T07D3.7a
InParanoid:O16720 OMA:YWACINF NextBio:879789 ArrayExpress:O16720
Uniprot:O16720
Length = 910
Score = 260 (96.6 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 76/235 (32%), Positives = 122/235 (51%)
Query: 25 YQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKV 83
+Q P R N G GR + NHFA+ P + HY + + PDK P R R V+ +
Sbjct: 62 FQCPVRPNH--GVEGRSILLRANHFAVRI--PGGSVQHYQIDVFPDKCPRRVNREVIGCL 117
Query: 84 AR---EYFPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKAQE 139
+YF N YDGK+N++++ LP GT MN V++ + + ++++ V +K +
Sbjct: 118 ISSFSKYFTNIRPVYDGKRNMYTREPLPIGTEPMNFEVTLPGDSAV-ERKFSVTMKWIGQ 176
Query: 140 ISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPD---PNRLVD 195
+ +++ + M V + P A+Q++DV+LR SL + VGRS+F+PP P +
Sbjct: 177 VCLSALDDAMEGRVRQVPHEAVQSIDVILRHLPSLK--YTPVGRSFFTPPGVMKPGMQMH 234
Query: 196 ----LGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEICRGLP 245
LG G +W GF+QS W+ LN+DV+ F VI+ + E+ LP
Sbjct: 235 QESKLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRAMPVIEFVAEVLE-LP 288
>FB|FBgn0262739 [details] [associations]
symbol:AGO1 "Argonaute-1" species:7227 "Drosophila
melanogaster" [GO:0005850 "eukaryotic translation initiation factor
2 complex" evidence=ISS] [GO:0016442 "RNA-induced silencing
complex" evidence=ISS] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0030422 "production of siRNA involved
in RNA interference" evidence=IMP] [GO:0030423 "targeting of mRNA
for destruction involved in RNA interference" evidence=IMP]
[GO:0016246 "RNA interference" evidence=TAS] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IDA;IMP]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0035195 "gene silencing by miRNA" evidence=IMP;NAS] [GO:0007416
"synapse assembly" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=IMP] [GO:0007367 "segment polarity
determination" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006402 "mRNA catabolic process"
evidence=IGI;IMP] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0036099 "female germ-line stem cell maintenance" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 EMBL:AE013599
GO:GO:0005634 GO:GO:0048471 GO:GO:0007294 GO:GO:0007416
GO:GO:0030529 SUPFAM:SSF53098 GO:GO:0006342 KO:K11593 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OMA:NNLVKRA
ChiTaRS:EIF2C1 GO:GO:0035279 GeneTree:ENSGT00640000091312
GO:GO:0030422 GO:GO:0007367 GO:GO:0030423 GO:GO:0006402
GO:GO:0030727 GO:GO:0035196 GO:GO:0036099 FlyBase:FBgn0262739
EMBL:BT023945 EMBL:BT125895 RefSeq:NP_001246314.1
RefSeq:NP_725341.1 RefSeq:NP_725342.1 UniGene:Dm.7398 PDB:1R4K
PDBsum:1R4K SMR:Q32KD4 DIP:DIP-59685N IntAct:Q32KD4 STRING:Q32KD4
EnsemblMetazoa:FBtr0087612 EnsemblMetazoa:FBtr0087613
EnsemblMetazoa:FBtr0305592 GeneID:36544 KEGG:dme:Dmel_CG6671
UCSC:CG6671-RA CTD:36544 InParanoid:Q32KD4 EvolutionaryTrace:Q32KD4
GenomeRNAi:36544 NextBio:799120 Uniprot:Q32KD4
Length = 984
Score = 255 (94.8 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 73/224 (32%), Positives = 115/224 (51%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
++ PRR N G GR + NHF +T P + HYD+ I PDK P + R +++
Sbjct: 132 VFTCPRRPNL--GREGRPIVLRANHFQVTM--PRGYVHHYDINIQPDKCPRKVNREIIET 187
Query: 83 VAREY---FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKAQ 138
+ Y F +DG+ NL+++ LP G + V++ E KD+ ++V IK
Sbjct: 188 MVHAYSKIFGVLKPVFDGRNNLYTRDPLPIGNERLELEVTLPGEG--KDRIFRVTIKWQA 245
Query: 139 EISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLG 197
++S ++ E + + P AI ALDVV+R S+ + VGRS+FS P+ LG
Sbjct: 246 QVSLFNLEEALEGRTRQIPYDAILALDVVMRHLPSMT--YTPVGRSFFSSPE-GYYHPLG 302
Query: 198 DGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G +W GF+QS W+ LN+DV+ F + + VI + E+
Sbjct: 303 GGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIDFMCEV 346
>TAIR|locus:2057851 [details] [associations]
symbol:AGO5 "ARGONAUTE 5" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 EMBL:AC006929 GO:GO:0030529
GO:GO:0007143 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035197 IPI:IPI00516720 PIR:A84678
RefSeq:NP_850110.1 UniGene:At.50103 PDB:4G0O PDBsum:4G0O
ProteinModelPortal:Q9SJK3 SMR:Q9SJK3 PaxDb:Q9SJK3 PRIDE:Q9SJK3
EnsemblPlants:AT2G27880.1 GeneID:817334 KEGG:ath:AT2G27880
TAIR:At2g27880 InParanoid:Q9SJK3 OMA:AREGPVE PhylomeDB:Q9SJK3
Genevestigator:Q9SJK3 GermOnline:AT2G27880 GO:GO:0005731
GO:GO:0033169 GO:GO:0007140 GO:GO:0009561 GO:GO:0055046
Uniprot:Q9SJK3
Length = 997
Score = 251 (93.4 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 78/234 (33%), Positives = 117/234 (50%)
Query: 36 GTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDKPVRYM-RPVMQKVAREYFPN---- 90
GTLG++ V NHF + + +L +HYDV+I+P+ + + R VM+ + + Y +
Sbjct: 154 GTLGKKVMVRANHFLVQVADRDL--YHYDVSINPEVISKTVNRNVMKLLVKNYKDSHLGG 211
Query: 91 -SPCGYDGKKNLFSKGTLPFGT---AMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIV 146
SP YDG+K+L++ G LPF + +N D KD+ +KV +K +
Sbjct: 212 KSPA-YDGRKSLYTAGPLPFDSKEFVVNLAEKRADGSSGKDRPFKVAVKNVTSTDLYQLQ 270
Query: 147 EFM-RTGVNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVD----LGDGLH 201
+F+ R P IQ LDVVLR+ S N ++V VGRS+F D LGDG+
Sbjct: 271 QFLDRKQREAPYDTIQVLDVVLRDKPS-N-DYVSVGRSFFHTSLGKDARDGRGELGDGIE 328
Query: 202 LWNGFYQSAGIGWRPY-LNVDVAHKGFPEEKSVIKVIDEIC--RGLPPELSDYD 252
W G++QS + LN+DV+ + F E V I + R L L D D
Sbjct: 329 YWRGYFQSLRLTQMGLSLNIDVSARSFYEPIVVTDFISKFLNIRDLNRPLRDSD 382
>TAIR|locus:2170897 [details] [associations]
symbol:AGO10 "ARGONAUTE 10" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0035019 "somatic stem
cell maintenance" evidence=IMP] [GO:0010586 "miRNA metabolic
process" evidence=IMP] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010050
"vegetative phase change" evidence=RCA] [GO:0010051 "xylem and
phloem pattern formation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
UniProt:Q9XGW1 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006417 GO:GO:0006355 GO:GO:0006351 GO:GO:0030529
SUPFAM:SSF53098 EMBL:AF154272 EMBL:AJ223508 EMBL:AB026651
IPI:IPI00539560 PIR:T52134 RefSeq:NP_001190464.1 RefSeq:NP_199194.1
UniGene:At.11438 ProteinModelPortal:Q9XGW1 SMR:Q9XGW1 STRING:Q9XGW1
PaxDb:Q9XGW1 PRIDE:Q9XGW1 EnsemblPlants:AT5G43810.1
EnsemblPlants:AT5G43810.2 GeneID:834403 KEGG:ath:AT5G43810
TAIR:At5g43810 eggNOG:NOG279895 HOGENOM:HOG000116043
InParanoid:Q9XGW1 KO:K11593 OMA:ENDILRT PhylomeDB:Q9XGW1
ProtClustDB:CLSN2686847 Genevestigator:Q9XGW1 GermOnline:AT5G43810
GO:GO:0035198 GO:GO:0031047 GO:GO:0048366 GO:GO:0010586
GO:GO:0035019 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
Length = 988
Score = 249 (92.7 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 85/237 (35%), Positives = 119/237 (50%)
Query: 36 GTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDKPVRYM-RPVMQKVAREYFPNSPCG 94
GTLG + V NHF P + YDV I P+ + + R ++ ++ R Y S G
Sbjct: 135 GTLGTKCIVKANHFLADL--PTKDLNQYDVTITPEVSSKSVNRAIIAELVRLY-KESDLG 191
Query: 95 -----YDGKKNLFSKGTLPFGTAMNCTVSIFDEER------MKDKEYKVEIKKAQEISFA 143
YDG+K+L++ G LPF T +V I DE+ +++ YKV IK +
Sbjct: 192 RRLPAYDGRKSLYTAGELPF-TWKEFSVKIVDEDDGIINGPKRERSYKVAIKFVARANMH 250
Query: 144 SIVEFMR-TGVNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPP--DPNRLVDLGDGL 200
+ EF+ + PQ A+Q LD+VLRE S+ F VGRS+FSP P RL G+GL
Sbjct: 251 HLGEFLAGKRADCPQEAVQILDIVLRE-LSVK-RFCPVGRSFFSPDIKTPQRL---GEGL 305
Query: 201 HLWNGFYQS---AGIGWRPYLNVDVAHKGFPEEKSVIKVIDEICRG--LPPELSDYD 252
W GFYQS +G LN+D+A F E VI+ + ++ L LSD D
Sbjct: 306 ESWCGFYQSIRPTQMGLS--LNIDMASAAFIEPLPVIEFVAQLLGKDVLSKPLSDSD 360
>UNIPROTKB|Q6T5B7 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=ISS] [GO:0006402 "mRNA catabolic
process" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035278 HSSP:Q9UL18 EMBL:AY436348 IPI:IPI00697621
RefSeq:NP_001001133.1 UniGene:Bt.47704 STRING:Q6T5B7 GeneID:406231
KEGG:bta:406231 CTD:192669 InParanoid:Q6T5B7 NextBio:20817875
GO:GO:0006402 Uniprot:Q6T5B7
Length = 861
Score = 232 (86.7 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 74/233 (31%), Positives = 118/233 (50%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L +PRR GT+G+ T++ N F + P + ++ Y+V I PDK P R R V+
Sbjct: 14 LLMVPRRPGY--GTMGKPTKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDS 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGTAMNCTVSIFDEERMKDKEYKVEIKKAQ 138
+ + + F + YDGK++L++ LP T + E KD+ +KV IK
Sbjct: 70 MVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDATLPGEGGKDRPFKVSIKFVS 129
Query: 139 EISFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSPP 188
+S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS P
Sbjct: 130 RVSWHLLHEVL-TGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSAP 186
Query: 189 DPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+ LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 187 EGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 238
>UNIPROTKB|Q6DCX2 [details] [associations]
symbol:eif2c2 "Protein argonaute-2" species:8355 "Xenopus
laevis" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=ISS] [GO:0005845 "mRNA cap binding complex" evidence=ISS]
[GO:0016442 "RNA-induced silencing complex" evidence=ISS]
[GO:0031054 "pre-miRNA processing" evidence=ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISS] [GO:0035197 "siRNA
binding" evidence=ISS] [GO:0035278 "negative regulation of
translation involved in gene silencing by miRNA" evidence=ISS]
[GO:0035279 "mRNA cleavage involved in gene silencing by miRNA"
evidence=ISS] [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0070551 "endoribonuclease activity,
cleaving siRNA-paired mRNA" evidence=ISS] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0046872 GO:GO:0045947 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932
GO:GO:0035068 GO:GO:0035278 GO:GO:0035197 CTD:27161 GO:GO:0005845
GO:GO:0016442 GO:GO:0070551 GO:GO:0000340 GO:GO:0035279
GO:GO:0031054 EMBL:BC077863 RefSeq:NP_001086988.1 UniGene:Xl.43287
HSSP:Q9UL18 ProteinModelPortal:Q6DCX2 SMR:Q6DCX2 GeneID:446823
KEGG:xla:446823 Xenbase:XB-GENE-1001922 Uniprot:Q6DCX2
Length = 862
Score = 232 (86.7 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 65/214 (30%), Positives = 110/214 (51%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HYD+ I P+K P R R +++ + + + F
Sbjct: 32 DFGTSGRTIKLQANVFEMDI--PKIEIYHYDIDIKPEKCPRRVNREIVEHMVQHFKAQIF 89
Query: 89 PNSPCGYDGKKNLFSKGTLPFGTAMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVEF 148
+ +DG+KNL++ LP + + KD+ +KV IK +S ++ +
Sbjct: 90 GDRKPVFDGRKNLYTAMPLPIARDKQVELEVTLPGEGKDRIFKVAIKWMACVSLQALHDA 149
Query: 149 MRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGFY 207
+ + N P +QALDVV+R S+ + VGRS+F+ + LG G +W GF+
Sbjct: 150 LSGRLPNVPFETVQALDVVMRHLPSMR--YTPVGRSFFTASE-GCANPLGGGREVWFGFH 206
Query: 208 QSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 207 QSVRPSLWKMMLNIDVSATAFYKAQPVIEFMCEV 240
>MGI|MGI:2446632 [details] [associations]
symbol:Ago2 "argonaute RISC catalytic subunit 2"
species:10090 "Mus musculus" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISO;IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003729
"mRNA binding" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005844 "polysome"
evidence=ISO] [GO:0005845 "mRNA cap binding complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006379 "mRNA cleavage" evidence=IMP] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016442 "RNA-induced
silencing complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0031054 "pre-miRNA
processing" evidence=ISO] [GO:0035068 "micro-ribonucleoprotein
complex" evidence=ISO;IDA] [GO:0035197 "siRNA binding"
evidence=ISO] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISO] [GO:0035279
"mRNA cleavage involved in gene silencing by miRNA" evidence=ISO]
[GO:0045947 "negative regulation of translational initiation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070551 "endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446632
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0045947 GO:GO:0003729 GO:GO:0006351 GO:GO:0009791
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 GO:GO:0035197
CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 OMA:AIKWMSC EMBL:AB081472 EMBL:BC096465
EMBL:BC128379 EMBL:BC129922 EMBL:AK220193 IPI:IPI00229988
RefSeq:NP_694818.3 UniGene:Mm.23095 UniGene:Mm.391971
UniGene:Mm.440409 UniGene:Mm.476931 UniGene:Mm.486474
UniGene:Mm.490340 ProteinModelPortal:Q8CJG0 SMR:Q8CJG0
DIP:DIP-35014N IntAct:Q8CJG0 STRING:Q8CJG0 PhosphoSite:Q8CJG0
PaxDb:Q8CJG0 PRIDE:Q8CJG0 Ensembl:ENSMUST00000044113 GeneID:239528
KEGG:mmu:239528 InParanoid:A1A563 NextBio:384151 Bgee:Q8CJG0
CleanEx:MM_EIF2C2 Genevestigator:Q8CJG0
GermOnline:ENSMUSG00000036698 Uniprot:Q8CJG0
Length = 860
Score = 230 (86.0 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 67/215 (31%), Positives = 114/215 (53%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HY++ I P+K P R R +++ + + + F
Sbjct: 31 DFGTTGRTIKLQANFFEMDI--PKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIF 88
Query: 89 PNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVE 147
+ +DG+KNL++ LP G + V++ E KD+ +KV IK +S ++ +
Sbjct: 89 GDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEG--KDRIFKVSIKWVSCVSLQALHD 146
Query: 148 FMRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGF 206
+ + + P IQALDVV+R S+ + VGRS+F+ + LG G +W GF
Sbjct: 147 ALSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCSNPLGGGREVWFGF 203
Query: 207 YQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 204 HQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEV 238
>RGD|621255 [details] [associations]
symbol:Ago2 "argonaute RISC catalytic component 2" species:10116
"Rattus norvegicus" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=IEA;ISO;ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003729
"mRNA binding" evidence=IEA;ISO] [GO:0004521 "endoribonuclease
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005844 "polysome"
evidence=IEA;ISO;ISS] [GO:0005845 "mRNA cap binding complex"
evidence=IEA;ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009791 "post-embryonic development" evidence=IEA;ISO]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=NAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0031054
"pre-miRNA processing" evidence=IEA;ISO;ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA;ISO;ISS] [GO:0035197
"siRNA binding" evidence=IEA;ISO;ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=IEA;ISO;ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA;ISO;ISS] [GO:0045947 "negative
regulation of translational initiation" evidence=IEA;ISO;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=IEA;ISO;ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:621255
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0045947 GO:GO:0006351 GO:GO:0009791 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197 CTD:27161
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:AF195534 IPI:IPI00214529
RefSeq:NP_067608.1 UniGene:Rn.35512 ProteinModelPortal:Q9QZ81
SMR:Q9QZ81 STRING:Q9QZ81 GeneID:59117 KEGG:rno:59117
UCSC:RGD:621255 InParanoid:Q9QZ81 NextBio:611775
ArrayExpress:Q9QZ81 Genevestigator:Q9QZ81
GermOnline:ENSRNOG00000008533 Uniprot:Q9QZ81
Length = 860
Score = 230 (86.0 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 67/215 (31%), Positives = 114/215 (53%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HY++ I P+K P R R +++ + + + F
Sbjct: 31 DFGTTGRTIKLQANFFEMDI--PKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIF 88
Query: 89 PNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVE 147
+ +DG+KNL++ LP G + V++ E KD+ +KV IK +S ++ +
Sbjct: 89 GDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEG--KDRIFKVSIKWVSCVSLQALHD 146
Query: 148 FMRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGF 206
+ + + P IQALDVV+R S+ + VGRS+F+ + LG G +W GF
Sbjct: 147 ALSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCSNPLGGGREVWFGF 203
Query: 207 YQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 204 HQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEV 238
>UNIPROTKB|O77503 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9986
"Oryctolagus cuniculus" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISS] [GO:0005844 "polysome" evidence=ISS]
[GO:0005845 "mRNA cap binding complex" evidence=ISS] [GO:0016442
"RNA-induced silencing complex" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0031054 "pre-miRNA
processing" evidence=ISS] [GO:0035068 "micro-ribonucleoprotein
complex" evidence=ISS] [GO:0035197 "siRNA binding" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0045947
"negative regulation of translational initiation" evidence=ISS]
[GO:0070551 "endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0045947 GO:GO:0006351
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0005844 GO:GO:0035278
GO:GO:0035197 CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 EMBL:AF005355 PIR:PC6505
RefSeq:NP_001076179.1 UniGene:Ocu.1816 ProteinModelPortal:O77503
SMR:O77503 STRING:O77503 GeneID:100009457 Uniprot:O77503
Length = 840
Score = 229 (85.7 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 67/215 (31%), Positives = 114/215 (53%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HY++ I P+K P R R +++ + + + F
Sbjct: 11 DFGTSGRTIKLQANFFEMDI--PKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKAQIF 68
Query: 89 PNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVE 147
+ +DG+KNL++ LP G + V++ E KD+ +KV IK +S ++ +
Sbjct: 69 GDRKPVFDGRKNLYTAMPLPIGREKVELEVTLPGEG--KDRIFKVSIKWVSCVSLQALHD 126
Query: 148 FMRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGF 206
+ + + P IQALDVV+R S+ + VGRS+F+ + LG G +W GF
Sbjct: 127 ALSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCSNPLGGGREVWFGF 183
Query: 207 YQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 184 HQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEV 218
>UNIPROTKB|Q9UKV8 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=NAS] [GO:0006412 "translation" evidence=NAS] [GO:0035279
"mRNA cleavage involved in gene silencing by miRNA"
evidence=IDA;IMP] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IDA;IMP] [GO:0005845
"mRNA cap binding complex" evidence=IDA] [GO:0045947 "negative
regulation of translational initiation" evidence=IDA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035197 "siRNA
binding" evidence=IDA] [GO:0031054 "pre-miRNA processing"
evidence=IDA] [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IDA] [GO:0000340 "RNA 7-methylguanosine
cap binding" evidence=IDA] [GO:0016442 "RNA-induced silencing
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005844 "polysome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0004521 "endoribonuclease activity" evidence=EXP] [GO:0005829
"cytosol" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0006413 "translational initiation" evidence=NAS]
Reactome:REACT_71 InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0046872 GO:GO:0045947
GO:GO:0007219 GO:GO:0006351 GO:GO:0009791 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197 CTD:27161
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:AC067931 EMBL:AC107375
EMBL:BC007633 EMBL:BC018727 EMBL:BC125214 EMBL:AY077717
EMBL:BT007229 EMBL:AF121255 IPI:IPI00745433 IPI:IPI00929290
RefSeq:NP_001158095.1 RefSeq:NP_036286.2 UniGene:Hs.449415 PDB:3LUC
PDB:3LUD PDB:3LUG PDB:3LUH PDB:3LUJ PDB:3LUK PDB:3QX8 PDB:3QX9
PDB:4EI1 PDB:4EI3 PDB:4F3T PDBsum:3LUC PDBsum:3LUD PDBsum:3LUG
PDBsum:3LUH PDBsum:3LUJ PDBsum:3LUK PDBsum:3QX8 PDBsum:3QX9
PDBsum:4EI1 PDBsum:4EI3 PDBsum:4F3T ProteinModelPortal:Q9UKV8
SMR:Q9UKV8 DIP:DIP-29194N IntAct:Q9UKV8 MINT:MINT-1957975
STRING:Q9UKV8 PhosphoSite:Q9UKV8 DMDM:229463006 PaxDb:Q9UKV8
PRIDE:Q9UKV8 DNASU:27161 Ensembl:ENST00000220592
Ensembl:ENST00000519980 GeneID:27161 KEGG:hsa:27161 UCSC:uc003yvn.3
UCSC:uc010meo.3 GeneCards:GC08M141541 HGNC:HGNC:3263 HPA:CAB019309
MIM:606229 neXtProt:NX_Q9UKV8 PharmGKB:PA27694 InParanoid:Q9UKV8
OMA:AIKWMSC PhylomeDB:Q9UKV8 ChiTaRS:EIF2C2
EvolutionaryTrace:Q9UKV8 GenomeRNAi:27161 NextBio:49946
ArrayExpress:Q9UKV8 Bgee:Q9UKV8 CleanEx:HS_EIF2C2
Genevestigator:Q9UKV8 GermOnline:ENSG00000123908 GO:GO:0003743
Uniprot:Q9UKV8
Length = 859
Score = 229 (85.7 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 67/215 (31%), Positives = 114/215 (53%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HY++ I P+K P R R +++ + + + F
Sbjct: 30 DFGTSGRTIKLQANFFEMDI--PKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIF 87
Query: 89 PNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVE 147
+ +DG+KNL++ LP G + V++ E KD+ +KV IK +S ++ +
Sbjct: 88 GDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEG--KDRIFKVSIKWVSCVSLQALHD 145
Query: 148 FMRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGF 206
+ + + P IQALDVV+R S+ + VGRS+F+ + LG G +W GF
Sbjct: 146 ALSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCSNPLGGGREVWFGF 202
Query: 207 YQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 203 HQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEV 237
>UNIPROTKB|B0JYP5 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9913 "Bos
taurus" [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IEA] [GO:0045947 "negative regulation
of translational initiation" evidence=IEA] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IEA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IEA] [GO:0035197 "siRNA binding"
evidence=IEA] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0005845
"mRNA cap binding complex" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0045947 GO:GO:0009791
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 GO:GO:0035197
IPI:IPI00704677 UniGene:Bt.21912 GO:GO:0005845 GO:GO:0016442
GO:GO:0070551 GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 OMA:AIKWMSC
GO:GO:0003743 EMBL:DAAA02037528 EMBL:DAAA02037529 EMBL:DAAA02037530
EMBL:BC151491 SMR:B0JYP5 STRING:B0JYP5 Ensembl:ENSBTAT00000002068
InParanoid:B0JYP5 Uniprot:B0JYP5
Length = 860
Score = 229 (85.7 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 67/215 (31%), Positives = 114/215 (53%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HY++ I P+K P R R +++ + + + F
Sbjct: 31 DFGTSGRTIKLQANFFEMDI--PKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIF 88
Query: 89 PNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVE 147
+ +DG+KNL++ LP G + V++ E KD+ +KV IK +S ++ +
Sbjct: 89 GDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEG--KDRIFKVSIKWVSCVSLQALHD 146
Query: 148 FMRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGF 206
+ + + P IQALDVV+R S+ + VGRS+F+ + LG G +W GF
Sbjct: 147 ALSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCSNPLGGGREVWFGF 203
Query: 207 YQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 204 HQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEV 238
>UNIPROTKB|Q6QME8 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9913 "Bos
taurus" [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005844 "polysome" evidence=ISS] [GO:0035197
"siRNA binding" evidence=ISS] [GO:0070551 "endoribonuclease
activity, cleaving siRNA-paired mRNA" evidence=ISS] [GO:0031054
"pre-miRNA processing" evidence=ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISS] [GO:0005845 "mRNA
cap binding complex" evidence=ISS] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=ISS] [GO:0016442
"RNA-induced silencing complex" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0045947 GO:GO:0006351 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197
EMBL:AY533678 IPI:IPI00704677 RefSeq:NP_991363.1 UniGene:Bt.21912
ProteinModelPortal:Q6QME8 SMR:Q6QME8 STRING:Q6QME8 PRIDE:Q6QME8
GeneID:404130 KEGG:bta:404130 CTD:27161 InParanoid:Q6QME8
NextBio:20817567 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 Uniprot:Q6QME8
Length = 860
Score = 229 (85.7 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 67/215 (31%), Positives = 114/215 (53%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HY++ I P+K P R R +++ + + + F
Sbjct: 31 DFGTSGRTIKLQANFFEMDI--PKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIF 88
Query: 89 PNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVE 147
+ +DG+KNL++ LP G + V++ E KD+ +KV IK +S ++ +
Sbjct: 89 GDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEG--KDRIFKVSIKWVSCVSLQALHD 146
Query: 148 FMRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGF 206
+ + + P IQALDVV+R S+ + VGRS+F+ + LG G +W GF
Sbjct: 147 ALSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCSNPLGGGREVWFGF 203
Query: 207 YQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 204 HQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEV 238
>UNIPROTKB|F1P3Z0 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 IPI:IPI00594029 OMA:GRSMPEP EMBL:AADN02043844
Ensembl:ENSGALT00000003527 Uniprot:F1P3Z0
Length = 860
Score = 228 (85.3 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 74/234 (31%), Positives = 121/234 (51%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L +PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+
Sbjct: 14 LLMVPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDS 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKA 137
+ + + F + YDGK++L++ LP T ++ V++ E KD+ +KV IK
Sbjct: 70 MVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSIKFV 128
Query: 138 QEISFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSP 187
+S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS
Sbjct: 129 SRVSWHLLHEVL-TGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSA 185
Query: 188 PDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
P+ LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 186 PEGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 238
>UNIPROTKB|Q5ZLG4 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035278 HSSP:Q9UL18 CTD:192669 GO:GO:0006402
EMBL:AJ719770 IPI:IPI00594029 RefSeq:NP_001026071.1
UniGene:Gga.22391 ProteinModelPortal:Q5ZLG4 SMR:Q5ZLG4
STRING:Q5ZLG4 PRIDE:Q5ZLG4 GeneID:419628 KEGG:gga:419628
InParanoid:Q5ZLG4 NextBio:20822658 Uniprot:Q5ZLG4
Length = 860
Score = 228 (85.3 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 74/234 (31%), Positives = 121/234 (51%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L +PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+
Sbjct: 14 LLMVPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDS 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKA 137
+ + + F + YDGK++L++ LP T ++ V++ E KD+ +KV IK
Sbjct: 70 MVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSIKFV 128
Query: 138 QEISFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSP 187
+S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS
Sbjct: 129 SRVSWHLLHEVL-TGRTLPEPLEPDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSA 185
Query: 188 PDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
P+ LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 186 PEGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 238
>UNIPROTKB|F1MG44 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
IPI:IPI00697621 GO:GO:0006402 OMA:IKLEAEY EMBL:DAAA02009205
ProteinModelPortal:F1MG44 Ensembl:ENSBTAT00000024385 Uniprot:F1MG44
Length = 860
Score = 228 (85.3 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 74/234 (31%), Positives = 121/234 (51%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L +PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+
Sbjct: 14 LLMVPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDS 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKA 137
+ + + F + YDGK++L++ LP T ++ V++ E KD+ +KV IK
Sbjct: 70 MVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSIKFV 128
Query: 138 QEISFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSP 187
+S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS
Sbjct: 129 SRVSWHLLHEVL-TGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSA 185
Query: 188 PDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
P+ LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 186 PEGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 238
>UNIPROTKB|E2R0U1 [details] [associations]
symbol:EIF2C3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 OMA:GRSMPEP EMBL:AAEX03009638
Ensembl:ENSCAFT00000005611 Uniprot:E2R0U1
Length = 860
Score = 228 (85.3 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 74/234 (31%), Positives = 121/234 (51%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L +PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+
Sbjct: 14 LLMVPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDS 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKA 137
+ + + F + YDGK++L++ LP T ++ V++ E KD+ +KV IK
Sbjct: 70 MVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSIKFV 128
Query: 138 QEISFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSP 187
+S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS
Sbjct: 129 SRVSWHLLHEVL-TGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSA 185
Query: 188 PDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
P+ LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 186 PEGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 238
>UNIPROTKB|Q9H9G7 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0010467 GO:GO:0007219 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0035278 CTD:192669 GO:GO:0006402
EMBL:AK022827 EMBL:AL138787 EMBL:BC025769 IPI:IPI00304181
IPI:IPI00551009 RefSeq:NP_079128.2 RefSeq:NP_803171.1
UniGene:Hs.657659 ProteinModelPortal:Q9H9G7 SMR:Q9H9G7
DIP:DIP-54486N IntAct:Q9H9G7 STRING:Q9H9G7 PhosphoSite:Q9H9G7
DMDM:76803660 PaxDb:Q9H9G7 PRIDE:Q9H9G7 DNASU:192669
Ensembl:ENST00000246314 Ensembl:ENST00000373191 GeneID:192669
KEGG:hsa:192669 UCSC:uc001bzp.3 GeneCards:GC01P036396
HGNC:HGNC:18421 HPA:HPA048342 MIM:607355 neXtProt:NX_Q9H9G7
PharmGKB:PA38329 InParanoid:Q9H9G7 OMA:IKLEAEY PhylomeDB:Q9H9G7
ChiTaRS:EIF2C3 GenomeRNAi:192669 NextBio:89367 ArrayExpress:Q9H9G7
Bgee:Q9H9G7 CleanEx:HS_EIF2C3 Genevestigator:Q9H9G7
GermOnline:ENSG00000126070 Uniprot:Q9H9G7
Length = 860
Score = 228 (85.3 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 74/234 (31%), Positives = 121/234 (51%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L +PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+
Sbjct: 14 LLMVPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDS 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKA 137
+ + + F + YDGK++L++ LP T ++ V++ E KD+ +KV IK
Sbjct: 70 MVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSIKFV 128
Query: 138 QEISFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSP 187
+S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS
Sbjct: 129 SRVSWHLLHEVL-TGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSA 185
Query: 188 PDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
P+ LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 186 PEGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 238
>MGI|MGI:2446634 [details] [associations]
symbol:Ago3 "argonaute RISC catalytic subunit 3"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446634
EMBL:CH466552 GO:GO:0003723 SUPFAM:SSF53098 eggNOG:NOG279895
HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 EMBL:AL606976 GeneTree:ENSGT00640000091310
HOVERGEN:HBG006101 CTD:192669 GO:GO:0006402 EMBL:AB081473
EMBL:AK154436 EMBL:AK171118 EMBL:BC137964 IPI:IPI00229987
RefSeq:NP_700451.2 UniGene:Mm.440915 UniGene:Mm.482388
UniGene:Mm.483093 ProteinModelPortal:Q8CJF9 SMR:Q8CJF9
STRING:Q8CJF9 PhosphoSite:Q8CJF9 PaxDb:Q8CJF9 PRIDE:Q8CJF9
Ensembl:ENSMUST00000069097 GeneID:214150 KEGG:mmu:214150
InParanoid:Q3TBP7 OMA:GRSMPEP NextBio:374206 Bgee:Q8CJF9
CleanEx:MM_EIF2C3 Genevestigator:Q8CJF9
GermOnline:ENSMUSG00000028842 Uniprot:Q8CJF9
Length = 860
Score = 228 (85.3 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 71/233 (30%), Positives = 121/233 (51%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L+ +PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+
Sbjct: 14 LFIVPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDS 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKA 137
+ + + F + YDGK++L++ LP T ++ V++ E KD+ +KV +K
Sbjct: 70 MVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSVKFV 128
Query: 138 QEISFASIVEFMRTG-------VNRPQIA--IQALDVVLREPCSLNANFVRVGRSYFSPP 188
+S+ + E + G +++P + A+DVVLR S+ + VGRS+FS P
Sbjct: 129 SRVSWHLLHEALAGGTLPEPLELDKPVSTNPVHAVDVVLRHLPSMK--YTPVGRSFFSAP 186
Query: 189 DPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+ LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 187 EGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 238
>UNIPROTKB|Q6DJB9 [details] [associations]
symbol:eif2c2 "Protein argonaute-2" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISS] [GO:0005845 "mRNA cap binding complex"
evidence=ISS] [GO:0016442 "RNA-induced silencing complex"
evidence=ISS] [GO:0031054 "pre-miRNA processing" evidence=ISS]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=ISS]
[GO:0035197 "siRNA binding" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0045947 "negative regulation of
translational initiation" evidence=ISS] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0046872
GO:GO:0045947 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068 GO:GO:0035278
GO:GO:0035197 CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 HSSP:Q9UL18 EMBL:BC075263
RefSeq:NP_001004877.1 UniGene:Str.65293 ProteinModelPortal:Q6DJB9
SMR:Q6DJB9 STRING:Q6DJB9 GeneID:448205 KEGG:xtr:448205
Xenbase:XB-GENE-1001916 InParanoid:Q6DJB9 Bgee:Q6DJB9
Uniprot:Q6DJB9
Length = 871
Score = 226 (84.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 64/214 (29%), Positives = 110/214 (51%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HY++ I P+K P R R +++ + + + F
Sbjct: 32 DFGTSGRTIKLQANFFEMDI--PKIEIYHYEIDIKPEKCPRRVNREIVEHMVQHFKAQIF 89
Query: 89 PNSPCGYDGKKNLFSKGTLPFGTAMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVEF 148
+ +DG+KNL++ LP + + KD+ +KV IK +S ++ +
Sbjct: 90 GDRKPVFDGRKNLYTAMPLPIARDKQVELEVTLPGEGKDRIFKVAIKWMACVSLQALHDA 149
Query: 149 MRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGFY 207
+ + + P IQALDVV+R S+ + VGRS+F+ + LG G +W GF+
Sbjct: 150 LSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCANPLGGGREVWFGFH 206
Query: 208 QSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 207 QSVRPSLWKMMLNIDVSATAFYKAQPVIEFMCEV 240
>UNIPROTKB|F1LZ24 [details] [associations]
symbol:Eif2c3 "Protein Eif2c3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1309163 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 IPI:IPI00388676
Ensembl:ENSRNOT00000037178 ArrayExpress:F1LZ24 Uniprot:F1LZ24
Length = 746
Score = 224 (83.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 72/231 (31%), Positives = 120/231 (51%)
Query: 27 IPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAR 85
+PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+ + +
Sbjct: 7 VPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDSMVQ 62
Query: 86 EY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKAQEI 140
+ F + YDGK++L++ LP T ++ V++ E KD+ +KV +K +
Sbjct: 63 HFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSVKFVSRV 121
Query: 141 SFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSPPDP 190
S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS P+
Sbjct: 122 SWHLLHEVL-TGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSAPEG 178
Query: 191 NRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 179 YDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 228
>UNIPROTKB|F1LUS2 [details] [associations]
symbol:Eif2c3 "Protein Eif2c3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1309163 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 OMA:IKLEAEY IPI:IPI00359343
Ensembl:ENSRNOT00000042371 ArrayExpress:F1LUS2 Uniprot:F1LUS2
Length = 854
Score = 224 (83.9 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 72/231 (31%), Positives = 120/231 (51%)
Query: 27 IPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAR 85
+PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+ + +
Sbjct: 11 VPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDSMVQ 66
Query: 86 EY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKAQEI 140
+ F + YDGK++L++ LP T ++ V++ E KD+ +KV +K +
Sbjct: 67 HFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSVKFVSRV 125
Query: 141 SFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSPPDP 190
S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS P+
Sbjct: 126 SWHLLHEVL-TGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSAPEG 182
Query: 191 NRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 183 YDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 232
>UNIPROTKB|F1NL39 [details] [associations]
symbol:LOC100858102 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005845 "mRNA cap binding complex"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=IEA]
[GO:0035197 "siRNA binding" evidence=IEA] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0045947
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0000932 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0035197 GO:GO:0005845
GO:GO:0016442 GO:GO:0070551 GO:GO:0000340 GO:GO:0035279
GO:GO:0031054 OMA:AIKWMSC EMBL:AADN02037477 EMBL:AADN02037478
IPI:IPI00572529 Ensembl:ENSGALT00000026092 Uniprot:F1NL39
Length = 856
Score = 224 (83.9 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 67/215 (31%), Positives = 114/215 (53%)
Query: 34 DGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----F 88
D GT GR ++ N F + P + I+HY++ I P+K P R R +++ + + + F
Sbjct: 27 DFGTSGRTIKLQANFFEMDI--PKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIF 84
Query: 89 PNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVE 147
+ +DG+KNL++ LP T + V++ E KD+ +KV IK +S ++ +
Sbjct: 85 GDRKPVFDGRKNLYTVMALPIVTDKVELEVTLPGEG--KDRIFKVAIKWMSCVSLQALHD 142
Query: 148 FMRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGF 206
+ + + P IQALDVV+R S+ + VGRS+F+ + LG G +W GF
Sbjct: 143 ALSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCSNPLGGGREVWFGF 199
Query: 207 YQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 200 HQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEV 234
>ZFIN|ZDB-GENE-060503-452 [details] [associations]
symbol:ago3b "argonaute RISC catalytic component
3b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:JX448394
Uniprot:K4IKE9
Length = 867
Score = 224 (83.9 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 74/233 (31%), Positives = 122/233 (52%)
Query: 25 YQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQKV 83
+ +PRR GT+G+ ++ N F + P + ++ YDV I P+K P R R V+ +
Sbjct: 15 FSVPRRPGY--GTMGKPIKLLANCFQVDI--PKMDVYLYDVDIKPEKCPRRVNREVVDSM 70
Query: 84 AREY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKAQ 138
+ + F + YDGKK+L++ LP +A ++ V++ E KD+ +KV IK
Sbjct: 71 VQHFKVTIFGDRRPVYDGKKSLYTAQPLPVASAGVDLDVTL-PGEGGKDRIFKVTIKFVS 129
Query: 139 EISFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSPP 188
+S+ + E + TG + P I+ + A+DVVLR S+ + VGRS+FS P
Sbjct: 130 LVSWHMLHEVL-TGRSTPDPLELDKPISTNPVHAVDVVLRHLPSMR--YTPVGRSFFSSP 186
Query: 189 DPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
+ LG G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 187 EGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV 238
>UNIPROTKB|Q5TA56 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR003100 EMBL:CH471059 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 GO:GO:0003743
EMBL:AL138787 UniGene:Hs.657659 HGNC:HGNC:18421 ChiTaRS:EIF2C3
IPI:IPI00514988 SMR:Q5TA56 STRING:Q5TA56 Ensembl:ENST00000324350
Ensembl:ENST00000397828 UCSC:uc001bzn.1 HOGENOM:HOG000139684
HOVERGEN:HBG058528 Uniprot:Q5TA56
Length = 229
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 69/215 (32%), Positives = 110/215 (51%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDK-PVRYMRPVMQK 82
L +PRR GT+G+ ++ N F + P + ++ Y+V I PDK P R R V+
Sbjct: 14 LLMVPRRPGY--GTMGKPIKLLANCFQVEI--PKIDVYLYEVDIKPDKCPRRVNREVVDS 69
Query: 83 VAREY----FPNSPCGYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKA 137
+ + + F + YDGK++L++ LP T ++ V++ E KD+ +KV IK
Sbjct: 70 MVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTL-PGEGGKDRPFKVSIKFV 128
Query: 138 QEISFASIVEFMRTGVNRPQ-------IA---IQALDVVLREPCSLNANFVRVGRSYFSP 187
+S+ + E + TG P+ I+ + A+DVVLR S+ + VGRS+FS
Sbjct: 129 SRVSWHLLHEVL-TGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK--YTPVGRSFFSA 185
Query: 188 PDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVD 221
P+ LG G +W GF+QS W+ LN+D
Sbjct: 186 PEGYDH-PLGGGREVWFGFHQSVRPAMWKMMLNID 219
>UNIPROTKB|F1PQZ7 [details] [associations]
symbol:EIF2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:AAEX03008878
Ensembl:ENSCAFT00000001857 OMA:CQRPREQ Uniprot:F1PQZ7
Length = 813
Score = 207 (77.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 60/193 (31%), Positives = 104/193 (53%)
Query: 56 PNLVIFHYDVAIDPDK-PVRYMRPVMQKVAREY----FPNSPCGYDGKKNLFSKGTLPFG 110
P + I+HY++ I P+K P R R +++ + + + F + +DG+KNL++ LP G
Sbjct: 4 PKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIG 63
Query: 111 T-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVEFMRTGV-NRPQIAIQALDVVLR 168
+ V++ E KD+ +KV IK +S ++ + + + + P IQALDVV+R
Sbjct: 64 RDKVELEVTLPGEG--KDRIFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMR 121
Query: 169 EPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGF 227
S+ + VGRS+F+ + LG G +W GF+QS W+ LN+DV+ F
Sbjct: 122 HLPSMR--YTPVGRSFFTASE-GCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAF 178
Query: 228 PEEKSVIKVIDEI 240
+ + VI+ + E+
Sbjct: 179 YKAQPVIEFVCEV 191
>UNIPROTKB|E1C5I5 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:AADN02043839 EMBL:AADN02043840
EMBL:AADN02043841 IPI:IPI00822132 Ensembl:ENSGALT00000040886
ArrayExpress:E1C5I5 Uniprot:E1C5I5
Length = 794
Score = 206 (77.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 52/158 (32%), Positives = 87/158 (55%)
Query: 86 EYFPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFAS 144
+ F + GYDGK+N+++ LP G ++ V++ E KD+ +KV I+ +S
Sbjct: 8 QIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSIQWVSVVSLQL 65
Query: 145 IVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLW 203
++E + +N P+ ++QALDV+ R S+ + VGRS+FSPP+ LG G +W
Sbjct: 66 LLEALAGHLNEVPEDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPLGGGREVW 122
Query: 204 NGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
GF+QS W LN+DV+ F + +I+ + E+
Sbjct: 123 FGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEV 160
>UNIPROTKB|Q5ZMW0 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=ISS] [GO:0035278 "negative regulation
of translation involved in gene silencing by miRNA" evidence=ISS]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 HSSP:Q9UL18 GO:GO:0006402 EMBL:AJ719274
IPI:IPI00735148 RefSeq:NP_001034365.1 UniGene:Gga.42596
ProteinModelPortal:Q5ZMW0 SMR:Q5ZMW0 STRING:Q5ZMW0 GeneID:419629
KEGG:gga:419629 CTD:192670 InParanoid:Q5ZMW0 NextBio:20822659
ArrayExpress:Q5ZMW0 Uniprot:Q5ZMW0
Length = 794
Score = 206 (77.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 52/158 (32%), Positives = 87/158 (55%)
Query: 86 EYFPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFAS 144
+ F + GYDGK+N+++ LP G ++ V++ E KD+ +KV I+ +S
Sbjct: 8 QIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSIQWVSVVSLQL 65
Query: 145 IVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLW 203
++E + +N P+ ++QALDV+ R S+ + VGRS+FSPP+ LG G +W
Sbjct: 66 LLEALAGHLNEVPEDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPLGGGREVW 122
Query: 204 NGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
GF+QS W LN+DV+ F + +I+ + E+
Sbjct: 123 FGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEV 160
>UNIPROTKB|Q5TA58 [details] [associations]
symbol:EIF2C1 "Protein argonaute-1" species:9606 "Homo
sapiens" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 UniGene:Hs.22867
HGNC:HGNC:3262 OrthoDB:EOG4229J0 ChiTaRS:EIF2C1 HOVERGEN:HBG006101
GO:GO:0003743 IPI:IPI00646765 SMR:Q5TA58 STRING:Q5TA58
Ensembl:ENST00000373206 Uniprot:Q5TA58
Length = 782
Score = 205 (77.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 54/149 (36%), Positives = 85/149 (57%)
Query: 95 YDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVEFMRTG- 152
YDGKKN+++ LP G ++ V+I E KD+ +KV IK +S+ + E + +G
Sbjct: 17 YDGKKNIYTVTALPIGNERVDFEVTIPGEG--KDRIFKVSIKWLAIVSWRMLHEALVSGQ 74
Query: 153 VNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGFYQSAGI 212
+ P ++QALDV +R S+ + VGRS+FSPP+ LG G +W GF+QS
Sbjct: 75 IPVPLESVQALDVAMRHLASMR--YTPVGRSFFSPPE-GYYHPLGGGREVWFGFHQSVRP 131
Query: 213 G-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
W+ LN+DV+ F + + VI+ + E+
Sbjct: 132 AMWKMMLNIDVSATAFYKAQPVIEFMCEV 160
>UNIPROTKB|F1PGN2 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:AAEX03009640
Ensembl:ENSCAFT00000005657 Uniprot:F1PGN2
Length = 794
Score = 203 (76.5 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 51/158 (32%), Positives = 86/158 (54%)
Query: 86 EYFPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKAQEISFAS 144
+ F + GYDGK+N+++ LP G ++ V++ E KD+ +KV ++ +S
Sbjct: 8 QIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG--KDQTFKVSVQWVSVVSLQL 65
Query: 145 IVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLW 203
++E + +N P ++QALDV+ R S+ + VGRS+FSPP+ LG G +W
Sbjct: 66 LLEALAGHLNEVPDDSVQALDVITRHLPSMR--YTPVGRSFFSPPE-GYYHPLGGGREVW 122
Query: 204 NGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
GF+QS W LN+DV+ F + +I+ + E+
Sbjct: 123 FGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEV 160
>TAIR|locus:2197545 [details] [associations]
symbol:AGO2 "argonaute 2" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0035197 "siRNA
binding" evidence=IDA] [GO:0051607 "defense response to virus"
evidence=IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006417 GO:GO:0006355 GO:GO:0042742 GO:GO:0006351
GO:GO:0051607 GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 EMBL:AC007654 EMBL:BT005914 EMBL:AK118463
IPI:IPI00546861 PIR:H86438 RefSeq:NP_174413.2 UniGene:At.40380
PDB:4G0M PDBsum:4G0M ProteinModelPortal:Q9SHF3 SMR:Q9SHF3
IntAct:Q9SHF3 PaxDb:Q9SHF3 PRIDE:Q9SHF3 EnsemblPlants:AT1G31280.1
GeneID:840016 KEGG:ath:AT1G31280 TAIR:At1g31280 eggNOG:NOG275416
InParanoid:Q9SHF3 OMA:DIPCLDL PhylomeDB:Q9SHF3
ProtClustDB:CLSN2682370 Genevestigator:Q9SHF3 GO:GO:0035197
Uniprot:Q9SHF3
Length = 1014
Score = 183 (69.5 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 56/168 (33%), Positives = 85/168 (50%)
Query: 29 RRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAID---PDKPV-RY-MRPVMQKV 83
+R ++ G RR + NH+ + F NP VI HYDV I P K V R+ + V KV
Sbjct: 163 KRPDRGGVVAVRRVNLYVNHYKVNF-NPESVIRHYDVEIKGEIPTKKVSRFELAMVRDKV 221
Query: 84 AREY---FPNSPCGYDGKKNLFSKGTLPFGTAMNCTVSIFDEERMKDKEYKVEIKKAQEI 140
+ FP + YDG+KN+FS LP G+ V E M+ + Y IK+ +
Sbjct: 222 FTDNPDEFPLAMTAYDGQKNIFSAVELPTGSYK---VEYPKTEEMRGRSYTFTIKQVNVL 278
Query: 141 SFASIVEFM--RTGVNRPQIAIQALDVVLREPCSLNANFVRVGRSYFS 186
+ E+M R+ N P+ +Q +DVV++E S + VG+S+F+
Sbjct: 279 KLGDLKEYMTGRSSFN-PRDVLQGMDVVMKEHPS--KCMITVGKSFFT 323
>UNIPROTKB|F1RSJ1 [details] [associations]
symbol:EIF2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IEA] [GO:0045947 "negative regulation
of translational initiation" evidence=IEA] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IEA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IEA] [GO:0035197 "siRNA binding"
evidence=IEA] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0005845
"mRNA cap binding complex" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=IEA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0045947 GO:GO:0009791 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0005844
GO:GO:0035278 GeneTree:ENSGT00640000091310 GO:GO:0035197
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:CU571011
Ensembl:ENSSSCT00000006516 OMA:VQTHRQE Uniprot:F1RSJ1
Length = 666
Score = 169 (64.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 51/165 (30%), Positives = 87/165 (52%)
Query: 79 VMQKVAREYFPNSPCGYDGKKNLFSKGTLPFGT-AMNCTVSIFDEERMKDKEYKVEIKKA 137
++Q + F + +DG+KNL++ LP G + V++ E KD+ +KV IK
Sbjct: 7 MVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEG--KDRIFKVSIKWV 64
Query: 138 QEISFASIVEFMRTGV-NRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDL 196
+S ++ + + + + P IQALDVV+R S+ + VGRS+F+ + L
Sbjct: 65 SCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMR--YTPVGRSFFTASE-GCSNPL 121
Query: 197 GDGLHLWNGFYQSAGIG-WRPYLNVDVAHKGFPEEKSVIKVIDEI 240
G G +W GF+QS W+ LN+DV+ F + + VI+ + E+
Sbjct: 122 GGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEV 166
>TAIR|locus:2197550 [details] [associations]
symbol:AGO3 "ARGONAUTE 3" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593 GO:GO:0031047
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AC007654
eggNOG:NOG275416 ProtClustDB:CLSN2682370 IPI:IPI00516671
RefSeq:NP_174414.1 UniGene:At.51183 ProteinModelPortal:Q9SHF2
SMR:Q9SHF2 PaxDb:Q9SHF2 PRIDE:Q9SHF2 EnsemblPlants:AT1G31290.1
GeneID:840017 KEGG:ath:AT1G31290 TAIR:At1g31290 InParanoid:Q9SHF2
OMA:ELAMVKE PhylomeDB:Q9SHF2 Genevestigator:Q9SHF2 Uniprot:Q9SHF2
Length = 1194
Score = 170 (64.9 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 57/192 (29%), Positives = 97/192 (50%)
Query: 29 RRSNKDGGTLGRRT-QVDTNHFAITFKNPNLVIFHYDVAI---DPDKPV-RY-MRPVMQK 82
+R +K G + + NHF ++F + VI HYDV I + K + R+ + V +K
Sbjct: 335 KRPDKGGNIKVKGVINLSVNHFRVSFSTES-VIRHYDVDIKGENSSKKISRFELAMVKEK 393
Query: 83 VAREY--FPNSPCGYDGKKNLFSKGTLPFGTAMNCTVSIFD-EERMKDKEYKVEIKKAQE 139
+ ++ FPN+ YDG+KN+FS LP G+ V + EE M+ + Y IK+ +E
Sbjct: 394 LFKDNNDFPNAMTAYDGQKNIFSAVELPTGSFK---VDFSETEEIMRGRSYTFIIKQVKE 450
Query: 140 ISFASIVEFMR-TGVNRPQIAIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRL-VDLG 197
+ + ++ P+ +Q +DVV++E S + VG+ +FS RL +D G
Sbjct: 451 LKLLDLQAYIDGRSTFIPRDVLQGMDVVMKEHPS--KRMITVGKRFFS----TRLEIDFG 504
Query: 198 DGLHLWNGFYQS 209
G+ GF+ +
Sbjct: 505 YGVGAAKGFHHT 516
>UNIPROTKB|Q75HC2 [details] [associations]
symbol:AGO7 "Protein argonaute 7" species:39947 "Oryza
sativa Japonica Group" [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0016246
GO:GO:0003676 EMBL:DP000009 EMBL:AP008209 SUPFAM:SSF53098
eggNOG:NOG279895 KO:K11593 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 HSSP:Q9UL18 OMA:YSPVEFQ ProtClustDB:CLSN2682549
GO:GO:0010492 GO:GO:0010599 GO:GO:0010267 GO:GO:0040034
GO:GO:0010050 EMBL:EF486281 EMBL:AB353924 EMBL:AC135597
RefSeq:NP_001050473.2 UniGene:Os.75048
EnsemblPlants:LOC_Os03g33650.1 GeneID:4333232
KEGG:dosa:Os03t0449200-00 KEGG:osa:4333232 Gramene:Q75HC2
Uniprot:Q75HC2
Length = 1048
Score = 110 (43.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 40/144 (27%), Positives = 68/144 (47%)
Query: 106 TLPFGTAMNCTVSIFDEERMKDKE----YKVEIKKAQEISFASIVEFM---RTGVNRPQI 158
+LP A C+V D M DK+ +KV ++ ++ + +++ + G+ PQ
Sbjct: 285 SLPVALA-RCSVVKEDTGHMLDKQKLKTFKVNVRLVSKLCGEDLNKYLNEDKDGIPLPQD 343
Query: 159 AIQALDVVLREPCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGFYQSAGIGWRPY- 217
+ ALDVVLRE ++ + VGRS ++ D+G G GF+Q +
Sbjct: 344 YLHALDVVLREGAMESS--ILVGRSLYAR-SMGEARDIGGGAVGLRGFFQRLRPTKQGLA 400
Query: 218 LNVDVAHKGFPEEKSVIKVIDEIC 241
LNVD++ F E +I + + C
Sbjct: 401 LNVDLSLSAFHESTGIISYLQKRC 424
Score = 109 (43.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 27 IPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPDKPVRYMRPVMQKVARE 86
I RR + GG G + NHF + F +P IFHY+V I P R + +K+ E
Sbjct: 194 IARRPDM-GGVEGAEIPLSANHFLVQF-DPGQKIFHYNVDISPRPSKETARMIKKKLVEE 251
Query: 87 ---YFPNSPCGYDGKKNLFS 103
S +DG+KNL+S
Sbjct: 252 NPSVLSGSQPAFDGRKNLYS 271
>POMBASE|SPCC736.11 [details] [associations]
symbol:ago1 "argonaute" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IGI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0005724 "nuclear telomeric heterochromatin"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006808
"regulation of nitrogen utilization" evidence=IMP] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0030958 "RITS
complex" evidence=IDA] [GO:0031048 "chromatin silencing by small
RNA" evidence=IMP] [GO:0031934 "mating-type region heterochromatin"
evidence=IDA] [GO:0033167 "ARC complex" evidence=IDA] [GO:0033168
"conversion of ds siRNA to ss siRNA involved in RNA interference"
evidence=IMP] [GO:0051570 "regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0090052 "regulation of chromatin silencing at
centromere" evidence=IMP] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
PomBase:SPCC736.11 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 SUPFAM:SSF53098 GO:GO:0031048 eggNOG:NOG279895
HOGENOM:HOG000116043 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 PIR:T41568 RefSeq:NP_587782.1
ProteinModelPortal:O74957 DIP:DIP-29298N IntAct:O74957
STRING:O74957 EnsemblFungi:SPCC736.11.1 GeneID:2539403
KEGG:spo:SPCC736.11 KO:K11596 OMA:YFREKYS OrthoDB:EOG4B8NN4
NextBio:20800567 GO:GO:0033167 GO:GO:0005721 GO:GO:0031934
GO:GO:0005724 GO:GO:0030958 GO:GO:0033168 GO:GO:0090052
GO:GO:0051570 GO:GO:0006808 Uniprot:O74957
Length = 834
Score = 163 (62.4 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 59/215 (27%), Positives = 107/215 (49%)
Query: 36 GTLGRRTQVDTNHFAITFKNPNLVIFHYDVAI-DPDKPVRYMRPVM--QKVAREYFPNSP 92
G LG++ + N F I PN I Y V + D + R ++ K ++YF +S
Sbjct: 16 GGLGKQITLKANFFQI-ISLPNETINQYHVIVGDGSRVPRKQSQLIWNSKEVKQYFGSSW 74
Query: 93 CG--YDGKKNLFSKGTLPFGTAMNCTVSIFDEERMKDKEYKVEIKKAQEISFASIVEFMR 150
YDG+ +SKG + GT V+I E ++ E+ ++ K+ +I+ ++ +F+
Sbjct: 75 MNSVYDGRSMCWSKGDIADGTIK---VNIGSESHPREIEFSIQ--KSSKINLHTLSQFVN 129
Query: 151 TGVNR-PQI--AIQALDVVLRE-PCSLNANFVRVGRSYFSPPDPNRLVDLGDGLHLWNGF 206
+ + PQ+ +I LD++L++ P F+ S+F+ + V LG G+ W GF
Sbjct: 130 SKYSSDPQVLSSIMFLDLLLKKKPSETLFGFMH---SFFTGENG---VSLGGGVEAWKGF 183
Query: 207 YQSA--GIGWRPYLNVDVAHKGFPEEKSVIKVIDE 239
YQS G+ +NVD++ F S+++++ E
Sbjct: 184 YQSIRPNQGFMS-VNVDISSSAFWRNDSLLQILME 217
>TAIR|locus:2059258 [details] [associations]
symbol:AGO4 "ARGONAUTE 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006342
"chromatin silencing" evidence=RCA;IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005719 "nuclear euchromatin" evidence=IDA] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA;IMP] [GO:0006306 "DNA methylation" evidence=RCA;IMP]
[GO:0010495 "long-distance posttranscriptional gene silencing"
evidence=IMP] [GO:0009816 "defense response to bacterium,
incompatible interaction" evidence=IMP] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA;TAS] [GO:0030422 "production
of siRNA involved in RNA interference" evidence=IGI] [GO:0035197
"siRNA binding" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0007267 "cell-cell
signaling" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0016569 "covalent chromatin modification" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0031047 "gene silencing by
RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0043085 "positive regulation
of catalytic activity" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] [GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0019048 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006417 GO:GO:0005730 GO:GO:0006351 GO:GO:0030529
GO:GO:0015030 SUPFAM:SSF53098 GO:GO:0031048 HOGENOM:HOG000116043
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 GO:GO:0030422 EMBL:AC005623 EMBL:AY035081
EMBL:AY051033 IPI:IPI00540794 PIR:A84668 RefSeq:NP_001189613.1
RefSeq:NP_565633.1 UniGene:At.13165 ProteinModelPortal:Q9ZVD5
SMR:Q9ZVD5 DIP:DIP-53402N IntAct:Q9ZVD5 STRING:Q9ZVD5 PaxDb:Q9ZVD5
PRIDE:Q9ZVD5 EnsemblPlants:AT2G27040.1 EnsemblPlants:AT2G27040.2
GeneID:817246 KEGG:ath:AT2G27040 TAIR:At2g27040 eggNOG:NOG286051
InParanoid:Q93VG2 OMA:SFFHNDP PhylomeDB:Q9ZVD5 ProtClustDB:PLN03202
Genevestigator:Q9ZVD5 GO:GO:0005719 GO:GO:0009816 GO:GO:0006306
GO:GO:0051567 Uniprot:Q9ZVD5
Length = 924
Score = 122 (48.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 33/95 (34%), Positives = 48/95 (50%)
Query: 22 KGLYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAI--DPDKPVRYM--- 76
KG ++P + K GT G++ + TNHF + N FHY VA+ D +PV
Sbjct: 50 KGPVRVPM-ARKGFGTRGQKIPLLTNHFKVDVANLQGHFFHYSVALFYDDGRPVEQKGVG 108
Query: 77 RPVMQKVAREYFPN---SPCGYDGKKNLFSKGTLP 108
R ++ KV + Y + YDG+K LF+ G LP
Sbjct: 109 RKILDKVHQTYHSDLDGKEFAYDGEKTLFTYGALP 143
Score = 79 (32.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 126 KDKEYKVEIKKAQEISFASIVEFMRTGVNR-PQIAIQALDVVLREPCSLNANFVRVGRSY 184
+ K ++VEI A +I ++ MR + Q AI+ LD++LR+ + + V +S+
Sbjct: 186 RSKNFRVEISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAARQGCLL-VRQSF 244
Query: 185 FSPPDPNRLVDLGDGLHLWNGFYQS 209
F DP +G + GF+ S
Sbjct: 245 FHN-DPTNCEPVGGNILGCRGFHSS 268
>TAIR|locus:2179008 [details] [associations]
symbol:AGO9 "ARGONAUTE 9" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0035197 "siRNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010529
"negative regulation of transposition" evidence=IMP] [GO:0048481
"ovule development" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006952
GO:GO:0006417 GO:GO:0006355 GO:GO:0006351 GO:GO:0010529
GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593
GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 eggNOG:NOG286051 EMBL:AJ544236 EMBL:AC140977
EMBL:AK221864 IPI:IPI00538032 RefSeq:NP_197613.2 UniGene:At.31104
ProteinModelPortal:Q84VQ0 SMR:Q84VQ0 PaxDb:Q84VQ0 PRIDE:Q84VQ0
EnsemblPlants:AT5G21150.1 GeneID:832241 KEGG:ath:AT5G21150
TAIR:At5g21150 InParanoid:Q84YI4 OMA:QWPLISK PhylomeDB:Q84VQ0
Genevestigator:Q84VQ0 GO:GO:0048481 Uniprot:Q84VQ0
Length = 896
Score = 123 (48.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 27 IPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAIDPD--KPVRYM---RPVMQ 81
+P + G+ G++ + TNHF + F P+ FHY VAI+ + +PV R ++
Sbjct: 35 LPMARPRGSGSKGQKIPLLTNHFGVKFNKPSGYFFHYSVAINYEDGRPVEAKGIGRKILD 94
Query: 82 KVAREYFPNSPC---GYDGKKNLFSKGTLP 108
KV Y + YDG+K LF+ G LP
Sbjct: 95 KVQETYQSDLGAKYFAYDGEKTLFTVGALP 124
Score = 75 (31.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 128 KEYKVEIKKAQEISFASIVEFMR-TGVNRPQIAIQALDVVLREPCSLNANFVRVGRSYFS 186
K++ VEI A +I +I ++ Q A++ LD++LR+ + + V +S+F
Sbjct: 163 KKFMVEISYAAKIPMQAIASALQGKETENLQDALRVLDIILRQSAARQGCLL-VRQSFFH 221
Query: 187 PPDPNRLVDLGDGLHLWNGFYQS 209
D V +G G+ GF+ S
Sbjct: 222 N-DVKNFVPIGGGVSGCRGFHSS 243
>WB|WBGene00006449 [details] [associations]
symbol:tag-76 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00950 GO:GO:0003676
GO:GO:0019915 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091312 EMBL:Z29121 EMBL:Z30215 PIR:D88568
PIR:S41013 RefSeq:NP_499191.1 RefSeq:NP_499192.1 RefSeq:NP_499193.1
ProteinModelPortal:P34681 SMR:P34681 STRING:P34681 PRIDE:P34681
EnsemblMetazoa:ZK757.3a.1 EnsemblMetazoa:ZK757.3a.2 GeneID:13190961
GeneID:176400 KEGG:cel:CELE_ZK757.3 KEGG:cel:CELE_ZK757.3a
UCSC:ZK757.3b CTD:176400 WormBase:ZK757.3a WormBase:ZK757.3b
WormBase:ZK757.3c InParanoid:P34681 OMA:ARIFCKY NextBio:892412
Uniprot:P34681
Length = 1040
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 56/187 (29%), Positives = 86/187 (45%)
Query: 76 MRPVMQKVAREY---FPNS-PCGYDGKKNLFSKGTLPF----GTA-MNCTVSIFDEERMK 126
MR + K ++ F N YDG L++ L F G+ ++C S+ + R +
Sbjct: 137 MRIIFWKAVSDHPNIFHNKFALAYDGAHQLYTVARLEFPDDQGSVRLDCEASLPKDNRDR 196
Query: 127 DKEYKVEIKKAQEISFASIVEFMRTGVN----RPQIAIQALDVVLREP--CSL---NANF 177
+ + I+ + ++E RT N R IQ LD++ R+ C L +ANF
Sbjct: 197 TR-CAISIQNVGPV----LLEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANF 251
Query: 178 VRVGRS-YFSPPDPNRLVDLGDGLHLWNGFYQSAGIG--WRPYLNVDVAHKGFPEEKSVI 234
S Y P + +DL G +W GF+ SA I +RP LN+DVAH F K+ I
Sbjct: 252 YTWKSSCYRIPTAAGQALDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAF--YKTRI 309
Query: 235 KVIDEIC 241
V+ +C
Sbjct: 310 TVLQFMC 316
>WB|WBGene00011910 [details] [associations]
symbol:T22B3.2b species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GeneTree:ENSGT00640000091312
GO:GO:0043186 EMBL:Z68300 EMBL:Z68750 UniGene:Cel.5687
GeneID:178106 KEGG:cel:CELE_T22B3.2 CTD:178106 NextBio:899736
PIR:T23164 PIR:T23165 RefSeq:NP_502217.1 ProteinModelPortal:G5ED77
SMR:G5ED77 PRIDE:G5ED77 EnsemblMetazoa:T22B3.2b WormBase:T22B3.2b
OMA:DATQREE Uniprot:G5ED77
Length = 1035
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 55/187 (29%), Positives = 86/187 (45%)
Query: 76 MRPVMQKVAREY---FPNS-PCGYDGKKNLFSKGTLPF----GTA-MNCTVSIFDEERMK 126
MR + K ++ F N YDG L++ L F G+ ++C ++ + R +
Sbjct: 135 MRIIFWKAVSDHPNIFHNKFALAYDGAHQLYTVARLEFPDDQGSVRLDCEATLPKDNRDR 194
Query: 127 DKEYKVEIKKAQEISFASIVEFMRTGVN----RPQIAIQALDVVLREP--CSL---NANF 177
+ + I+ + ++E RT N R IQ LD++ R+ C L +ANF
Sbjct: 195 TR-CAISIQNVGPV----LLEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANF 249
Query: 178 VRVGRS-YFSPPDPNRLVDLGDGLHLWNGFYQSAGIG--WRPYLNVDVAHKGFPEEKSVI 234
S Y P + +DL G +W GF+ SA I +RP LN+DVAH F K+ I
Sbjct: 250 YTWKSSCYRIPTAAGQALDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAF--YKTRI 307
Query: 235 KVIDEIC 241
V+ +C
Sbjct: 308 TVLQFMC 314
>TAIR|locus:2147072 [details] [associations]
symbol:AT5G21030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00950 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006417 GO:GO:0006355 GO:GO:0006351
GO:GO:0003723 GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 ProtClustDB:PLN03202 EMBL:AC069325 IPI:IPI00541100
RefSeq:NP_197602.2 UniGene:At.54936 ProteinModelPortal:Q3E984
SMR:Q3E984 PaxDb:Q3E984 PRIDE:Q3E984 EnsemblPlants:AT5G21030.1
GeneID:832227 KEGG:ath:AT5G21030 TAIR:At5g21030 eggNOG:NOG246334
InParanoid:Q3E984 OMA:IDSNICH PhylomeDB:Q3E984
Genevestigator:Q3E984 Uniprot:Q3E984
Length = 850
Score = 123 (48.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 51/173 (29%), Positives = 75/173 (43%)
Query: 24 LYQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLV-IFHYDVAI--DPDKPVR---YMR 77
L + RR N G+ G++ + TNHF + F+ PN FHY V I + P+ + R
Sbjct: 22 LLPMTRRGN---GSKGQKILLLTNHFRVNFRKPNSHNFFHYSVTITYEDGSPLLAKGFGR 78
Query: 78 PVMQKVAREYFPNSPC---GYDGKKNLFSKGTLPFGTA-MNCTVSIFDEERMKDKEYKV- 132
+++KV + + C YDG KNL++ G LP + + + R DK K+
Sbjct: 79 KILEKVQQTCQADLGCKHFAYDGDKNLYTVGPLPRSSLDFSVVLETAPSRRNADKRLKLP 138
Query: 133 -EIKKAQ-EISFASIVEFMRTGVNRPQ--IAIQALDVVLREPCSLNANFVRVG 181
+ KK I FA M N Q LD + C L+ N R G
Sbjct: 139 HQSKKFNVAILFAPPEIPMEAIANALQGKKTKHLLDAIRVMDCILSQNAARQG 191
>TAIR|locus:2059370 [details] [associations]
symbol:AGO6 "ARGONAUTE 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IGI] [GO:0030422
"production of siRNA involved in RNA interference" evidence=IMP]
[GO:0035197 "siRNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952
GO:GO:0006417 GO:GO:0006351 GO:GO:0030529 SUPFAM:SSF53098
GO:GO:0006342 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0035197 GO:GO:0030422
GO:GO:0006306 EMBL:AC003033 IPI:IPI00537010 PIR:T01113
RefSeq:NP_180853.2 UniGene:At.53011 ProteinModelPortal:O48771
SMR:O48771 STRING:O48771 PaxDb:O48771 PRIDE:O48771
EnsemblPlants:AT2G32940.1 GeneID:817856 KEGG:ath:AT2G32940
TAIR:At2g32940 eggNOG:NOG271046 InParanoid:O48771 OMA:CLDVGKP
PhylomeDB:O48771 Genevestigator:O48771 Uniprot:O48771
Length = 878
Score = 99 (39.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 25 YQIPRRSNKDGGTLGRRTQVDTNHFAITFKNPNLVIFHYDVAI-----DPDKPVRYMRPV 79
Y I R + GT G ++ TNHF ++ + P++V + Y V+I D R +
Sbjct: 24 YDITTR--RGVGTTGNPIELCTNHFNVSVRQPDVVFYQYTVSITTENGDAVDGTGISRKL 81
Query: 80 MQKVAREY---FPNSPCGYDGKKNLFSKGTLP 108
M ++ + Y YDG+K L++ G LP
Sbjct: 82 MDQLFKTYSSDLDGKRLAYDGEKTLYTVGPLP 113
Score = 66 (28.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 128 KEYKVEIKKAQEISFASIVEFMRTGVNRP----QIAIQALDVVLREPCSLNANFVRVGRS 183
+ YKV+I A EI +++ R G P Q A++ LD+VLR+ + + V ++
Sbjct: 154 RSYKVQIHYAAEIPLKTVLGTQR-GAYTPDKSAQDALRVLDIVLRQQAA-ERGCLLVRQA 211
Query: 184 YF-SPPDPNRLVD--LG-DGLHLWNGFYQSAGIGWRPYLNVDVAHKGFPEEKSVIKVI 237
+F S P ++ +G GLH + F + G G LN+DV+ E VI+ +
Sbjct: 212 FFHSDGHPMKVGGGVIGIRGLH--SSFRPTHG-GLS--LNIDVSTTMILEPGPVIEFL 264
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.140 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 252 233 0.00086 113 3 11 22 0.40 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 597 (63 KB)
Total size of DFA: 186 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.64u 0.07s 20.71t Elapsed: 00:00:04
Total cpu time: 20.66u 0.07s 20.73t Elapsed: 00:00:04
Start: Thu Aug 15 14:49:39 2013 End: Thu Aug 15 14:49:43 2013