Query psy5197
Match_columns 564
No_of_seqs 91 out of 113
Neff 3.8
Searched_HMMs 29240
Date Fri Aug 16 19:48:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k66_A Beta-amyloid-like prote 100.0 2.3E-84 7.7E-89 634.4 20.5 213 326-539 2-216 (239)
2 3pmr_A Amyloid-like protein 1; 100.0 4.5E-84 1.6E-88 627.2 18.7 206 320-532 6-213 (219)
3 3umh_A Amyloid beta A4 protein 100.0 1.2E-82 4.3E-87 614.3 20.2 203 325-534 6-208 (211)
4 3ktm_A Amyloid beta A4 protein 100.0 3.9E-63 1.3E-67 471.0 5.2 116 1-116 60-176 (191)
5 2fma_A Amyloid beta A4 protein 100.0 2E-36 6.8E-41 241.1 2.0 59 55-113 1-59 (59)
6 1mwp_A Amyloid A4 protein; hep 99.9 2.7E-25 9.1E-30 192.6 0.5 47 1-47 49-96 (96)
7 2lp1_A C99; alzheimer'S D memb 99.5 2.6E-18 9E-23 152.9 0.0 71 208-287 28-98 (122)
8 3dxe_B Amyloid beta A4 protein 99.0 1.7E-11 5.7E-16 88.0 -1.4 32 256-287 2-33 (35)
9 2ysz_A Amyloid beta A4 precurs 98.4 1.1E-07 3.9E-12 90.9 4.1 36 252-287 148-183 (185)
10 2yt0_A Amyloid beta A4 protein 97.8 7.6E-06 2.6E-10 77.9 2.2 31 257-287 7-37 (176)
11 3rkv_A Putative peptidylprolyl 87.5 9.3 0.00032 32.1 12.1 122 406-527 5-145 (162)
12 2llm_A Amyloid beta A4 protein 85.2 0.18 6E-06 38.3 0.0 29 208-236 15-43 (43)
13 2ddi_A WAP, follistatin/kazal, 84.8 0.1 3.5E-06 42.6 -1.4 39 233-287 23-61 (70)
14 1bf0_A Calcicludine; calcium c 82.3 0.31 1.1E-05 38.2 0.4 35 233-283 20-54 (60)
15 1kth_A Collagen alpha 3(VI) ch 82.1 0.33 1.1E-05 37.8 0.5 23 233-256 18-40 (58)
16 3aub_A BPTI, bovine pancreatic 81.6 0.34 1.2E-05 37.7 0.4 34 233-282 18-51 (58)
17 3aug_A BPTI, bovine pancreatic 80.7 0.38 1.3E-05 38.4 0.4 39 233-287 18-56 (65)
18 4dtg_K Tissue factor pathway i 80.6 0.21 7.1E-06 40.3 -1.2 36 233-284 20-55 (66)
19 1y62_A Conkunitzin-S1; alpha h 80.5 0.39 1.3E-05 37.6 0.4 35 232-282 19-53 (60)
20 1aap_A Alzheimer'S disease amy 80.5 0.32 1.1E-05 37.8 -0.1 23 233-256 18-40 (58)
21 1dtk_A Dendrotoxin K; presynap 80.4 0.4 1.4E-05 37.2 0.4 23 233-256 18-40 (57)
22 1zr0_B TFPI-2, tissue factor p 78.8 0.48 1.6E-05 37.3 0.4 34 233-282 22-55 (63)
23 1yc0_I Kunitz-type protease in 78.5 0.49 1.7E-05 38.9 0.4 34 233-282 35-68 (75)
24 1g6x_A Pancreatic trypsin inhi 78.0 0.52 1.8E-05 36.5 0.4 34 233-282 18-51 (58)
25 1irh_A Tissue factor pathway i 77.9 0.45 1.5E-05 37.3 0.0 34 233-282 21-54 (61)
26 3byb_A Textilinin, textilinin- 77.7 0.54 1.8E-05 36.6 0.4 24 232-256 19-42 (59)
27 1dtx_A Alpha-dendrotoxin; pres 77.0 0.58 2E-05 36.5 0.4 23 233-256 20-42 (59)
28 1jc6_A Venom basic protease in 76.7 0.65 2.2E-05 37.0 0.6 39 233-287 20-58 (65)
29 2vgx_A Chaperone SYCD; alterna 76.6 31 0.0011 29.2 11.3 103 425-530 35-142 (148)
30 2kcr_A Anntoxin; protein; NMR 76.5 0.67 2.3E-05 36.3 0.6 23 233-256 20-42 (61)
31 1co7_I BPTI, bovine pancreatic 76.3 0.36 1.2E-05 41.5 -1.0 39 233-287 52-90 (99)
32 1bun_B BETA2-bungarotoxin; hyd 74.9 0.56 1.9E-05 36.8 -0.2 35 232-282 19-53 (61)
33 3m7q_B Kunitz-type proteinase 74.6 0.4 1.4E-05 37.6 -1.1 35 233-283 20-54 (61)
34 3bee_A Putative YFRE protein; 74.4 16 0.00056 29.7 8.6 51 427-479 25-75 (93)
35 2jot_A Huwentoxin-11; proteina 73.4 0.59 2E-05 36.1 -0.4 21 233-256 17-37 (55)
36 3upv_A Heat shock protein STI1 72.9 32 0.0011 27.2 9.9 54 425-480 18-71 (126)
37 1adz_A TFPI, EPI, LACI, tissue 72.6 0.74 2.5E-05 37.5 -0.0 39 232-286 26-64 (71)
38 3vtx_A MAMA; tetratricopeptide 71.7 39 0.0013 28.4 10.6 118 361-481 52-175 (184)
39 1hxi_A PEX5, peroxisome target 69.1 33 0.0011 28.0 9.4 55 425-481 31-85 (121)
40 1jad_A PLC-beta, phospholipase 67.9 76 0.0026 31.8 13.1 100 346-459 140-245 (251)
41 2xcb_A PCRH, regulatory protei 65.9 55 0.0019 26.9 10.5 54 425-480 32-85 (142)
42 3gyz_A Chaperone protein IPGC; 64.4 45 0.0015 29.1 9.8 54 425-480 50-103 (151)
43 4gcn_A Protein STI-1; structur 60.6 31 0.0011 28.3 7.7 54 425-480 22-75 (127)
44 2fbn_A 70 kDa peptidylprolyl i 59.7 72 0.0025 27.5 10.2 107 358-480 48-155 (198)
45 3fp2_A TPR repeat-containing p 58.4 1.2E+02 0.004 29.8 12.5 89 425-522 442-530 (537)
46 2lp1_A C99; alzheimer'S D memb 63.0 2.1 7.1E-05 38.7 0.0 50 482-535 40-91 (122)
47 2q7f_A YRRB protein; TPR, prot 55.7 88 0.003 26.8 10.0 53 426-480 140-192 (243)
48 1fch_A Peroxisomal targeting s 55.4 9.1 0.00031 35.6 3.9 53 426-480 79-131 (368)
49 3q49_B STIP1 homology and U bo 55.1 37 0.0013 26.8 7.0 52 426-479 24-75 (137)
50 3ghg_A Fibrinogen alpha chain; 55.1 27 0.00092 38.5 7.8 106 445-562 83-228 (562)
51 3q49_B STIP1 homology and U bo 54.8 76 0.0026 24.9 10.6 75 425-501 57-131 (137)
52 2kat_A Uncharacterized protein 54.7 69 0.0024 25.0 8.5 49 430-480 4-52 (115)
53 4gco_A Protein STI-1; structur 54.2 87 0.003 25.7 9.4 51 428-480 30-80 (126)
54 3uq3_A Heat shock protein STI1 53.9 1.1E+02 0.0036 26.4 13.5 116 359-480 90-206 (258)
55 4abn_A Tetratricopeptide repea 52.2 2E+02 0.007 29.1 14.9 18 428-445 196-213 (474)
56 2ody_E Boophilin; kunitz-type 52.1 3.5 0.00012 36.6 0.4 34 233-282 87-120 (127)
57 1kt0_A FKBP51, 51 kDa FK506-bi 51.3 90 0.0031 31.8 10.8 83 411-500 316-399 (457)
58 1bik_A Bikunin; glycoprotein, 50.9 3.7 0.00013 37.5 0.4 39 233-287 95-133 (147)
59 2ody_E Boophilin; kunitz-type 50.2 3.9 0.00013 36.3 0.4 40 232-287 18-57 (127)
60 1kt0_A FKBP51, 51 kDa FK506-bi 49.7 96 0.0033 31.6 10.7 105 407-511 263-383 (457)
61 1ihg_A Cyclophilin 40; ppiase 48.3 2.2E+02 0.0074 28.3 13.9 69 410-480 271-340 (370)
62 1a17_A Serine/threonine protei 48.0 1.1E+02 0.0036 24.6 11.2 55 425-481 61-115 (166)
63 2vgx_A Chaperone SYCD; alterna 47.9 98 0.0034 26.1 9.0 54 425-480 69-122 (148)
64 3upv_A Heat shock protein STI1 47.8 1E+02 0.0034 24.3 9.8 72 426-499 53-125 (126)
65 1zu2_A Mitochondrial import re 47.3 1E+02 0.0034 28.3 9.4 77 427-519 62-147 (158)
66 2xcb_A PCRH, regulatory protei 47.3 1.2E+02 0.004 24.9 9.2 89 361-480 31-119 (142)
67 1bik_A Bikunin; glycoprotein, 46.6 4.8 0.00016 36.8 0.4 40 232-287 38-77 (147)
68 3mkr_A Coatomer subunit epsilo 46.5 1.9E+02 0.0065 27.3 11.6 22 360-381 142-163 (291)
69 4i17_A Hypothetical protein; T 46.4 1.5E+02 0.005 25.8 10.2 18 462-479 91-108 (228)
70 3qou_A Protein YBBN; thioredox 45.4 1.4E+02 0.0049 27.8 10.5 50 429-480 203-252 (287)
71 2pzi_A Probable serine/threoni 45.4 1.7E+02 0.0057 31.6 12.2 52 426-480 482-533 (681)
72 3ieg_A DNAJ homolog subfamily 44.4 1.8E+02 0.0061 26.2 12.8 21 361-381 201-221 (359)
73 2r5s_A Uncharacterized protein 43.4 59 0.002 27.6 6.9 84 427-512 56-141 (176)
74 4abn_A Tetratricopeptide repea 43.2 2.8E+02 0.0095 28.1 15.4 159 361-531 150-334 (474)
75 1ihg_A Cyclophilin 40; ppiase 43.2 1.2E+02 0.004 30.2 10.0 73 425-499 237-327 (370)
76 1w3b_A UDP-N-acetylglucosamine 42.0 2.3E+02 0.0077 26.7 13.0 65 413-479 68-133 (388)
77 2kck_A TPR repeat; tetratricop 38.7 91 0.0031 22.9 6.5 53 425-479 20-72 (112)
78 3hym_B Cell division cycle pro 38.5 2.2E+02 0.0074 25.5 13.7 62 416-479 96-157 (330)
79 2l6j_A TPR repeat-containing p 38.5 1.2E+02 0.0042 22.6 8.6 54 425-480 18-71 (111)
80 1toc_R Ornithodorin; vitamin K 38.3 4.2 0.00014 35.9 -1.3 37 233-286 78-114 (120)
81 3rkv_A Putative peptidylprolyl 38.2 1.7E+02 0.0058 24.2 12.0 85 411-501 62-147 (162)
82 4afl_A P29ING4, inhibitor of g 36.9 86 0.0029 26.4 6.7 93 430-529 5-101 (104)
83 2gw1_A Mitochondrial precursor 36.8 2.1E+02 0.0071 27.6 10.3 100 408-510 2-104 (514)
84 2fbn_A 70 kDa peptidylprolyl i 36.6 2E+02 0.0069 24.6 13.3 91 407-498 33-141 (198)
85 4abx_A DNA repair protein RECN 36.5 2.1E+02 0.0073 26.0 9.9 41 458-509 101-141 (175)
86 1p5q_A FKBP52, FK506-binding p 35.8 3E+02 0.01 26.4 11.4 53 426-480 211-263 (336)
87 4g1t_A Interferon-induced prot 34.3 1.5E+02 0.0052 28.7 8.9 57 426-482 349-407 (472)
88 2c2l_A CHIP, carboxy terminus 33.5 98 0.0033 29.0 7.2 99 392-493 19-118 (281)
89 3zvr_A Dynamin-1; hydrolase, D 33.2 5.9E+02 0.02 29.0 15.1 149 370-528 333-488 (772)
90 3qou_A Protein YBBN; thioredox 33.2 2.7E+02 0.0094 25.9 10.3 99 425-525 165-266 (287)
91 2xev_A YBGF; tetratricopeptide 33.1 1.7E+02 0.0057 22.6 9.5 55 425-480 16-72 (129)
92 4i1l_A Scurfin, forkhead box p 32.7 31 0.0011 30.0 3.2 20 395-414 53-72 (93)
93 3sz7_A HSC70 cochaperone (SGT) 32.4 2.1E+02 0.0073 23.6 11.2 67 412-480 11-78 (164)
94 1p5q_A FKBP52, FK506-binding p 32.4 3.5E+02 0.012 26.0 11.5 21 426-446 245-265 (336)
95 2y39_A Nickel and cobalt resis 32.0 2.8E+02 0.0096 24.9 11.3 87 394-492 26-113 (118)
96 1hxi_A PEX5, peroxisome target 31.9 2E+02 0.0069 23.2 9.6 90 361-481 30-119 (121)
97 1f5n_A Interferon-induced guan 30.6 2.1E+02 0.0071 31.5 10.2 52 383-434 514-565 (592)
98 2pl2_A Hypothetical conserved 30.6 2.8E+02 0.0096 24.4 10.8 52 427-480 21-72 (217)
99 3urz_A Uncharacterized protein 30.1 1.6E+02 0.0056 25.8 7.8 55 426-482 69-123 (208)
100 1deq_A Fibrinogen (alpha chain 30.0 2.5E+02 0.0086 29.8 10.1 63 431-504 72-134 (390)
101 2e2e_A Formate-dependent nitri 29.9 1.5E+02 0.0052 24.6 7.2 18 428-445 61-78 (177)
102 2vsy_A XCC0866; transferase, g 29.8 2.6E+02 0.009 28.5 10.3 21 361-381 36-56 (568)
103 3fp2_A TPR repeat-containing p 29.5 4E+02 0.014 25.9 14.3 147 329-479 183-342 (537)
104 1fch_A Peroxisomal targeting s 28.1 3.5E+02 0.012 24.8 12.1 20 427-446 148-167 (368)
105 2h6f_A Protein farnesyltransfe 27.6 1.2E+02 0.0042 30.5 7.2 117 361-480 110-233 (382)
106 3he5_B Synzip2; heterodimeric 27.4 55 0.0019 25.0 3.4 45 352-408 7-51 (52)
107 3uoi_A Bacterioferritin, BFR; 27.2 1.2E+02 0.0042 26.2 6.3 27 412-438 129-155 (161)
108 1elw_A TPR1-domain of HOP; HOP 26.6 1.9E+02 0.0066 21.2 9.2 54 424-479 17-70 (118)
109 2ike_A Prophenoloxidase activa 26.5 18 0.0006 27.2 0.6 16 94-112 39-54 (54)
110 1wao_1 Serine/threonine protei 26.3 1.8E+02 0.0063 29.8 8.4 54 426-481 55-108 (477)
111 3qky_A Outer membrane assembly 26.0 3.5E+02 0.012 24.0 16.5 132 338-479 15-180 (261)
112 4gco_A Protein STI-1; structur 25.9 1.9E+02 0.0065 23.6 7.0 54 426-481 62-115 (126)
113 2ett_A Sorting nexin-22; PX do 25.8 36 0.0012 30.0 2.5 31 424-457 84-114 (128)
114 2ifu_A Gamma-SNAP; membrane fu 25.6 3.1E+02 0.011 25.6 9.2 28 414-442 197-225 (307)
115 1elr_A TPR2A-domain of HOP; HO 25.6 2.1E+02 0.0073 21.4 9.8 53 425-479 18-70 (131)
116 3vtx_A MAMA; tetratricopeptide 25.6 2.9E+02 0.0098 22.9 13.3 118 361-481 18-141 (184)
117 3r2k_A Bacterioferritin, BFR; 25.3 1.5E+02 0.0052 25.5 6.5 25 413-437 128-152 (154)
118 2ar5_A Phosphoinositide 3-kina 25.1 29 0.00099 30.0 1.8 22 423-444 80-101 (121)
119 3iyk_A VP5; icosahedral virus; 24.1 5.5E+02 0.019 28.2 11.6 72 428-505 152-223 (526)
120 4ga2_A E3 SUMO-protein ligase 24.0 3.1E+02 0.011 22.8 10.3 127 393-521 13-145 (150)
121 1a17_A Serine/threonine protei 24.0 2.7E+02 0.0093 22.1 9.8 68 411-480 12-80 (166)
122 2pl2_A Hypothetical conserved 24.0 3.7E+02 0.013 23.6 10.6 92 361-481 18-118 (217)
123 3ieg_A DNAJ homolog subfamily 23.7 4E+02 0.014 23.9 11.5 54 426-481 169-222 (359)
124 2y4t_A DNAJ homolog subfamily 23.6 4.8E+02 0.016 24.8 12.6 81 414-501 297-378 (450)
125 2if4_A ATFKBP42; FKBP-like, al 23.5 1.2E+02 0.004 29.5 6.0 20 460-479 243-262 (338)
126 3urz_A Uncharacterized protein 23.4 3.7E+02 0.013 23.4 13.8 54 426-479 103-156 (208)
127 3sz7_A HSC70 cochaperone (SGT) 23.1 3.2E+02 0.011 22.5 10.0 55 426-482 60-114 (164)
128 3mkr_A Coatomer subunit epsilo 23.0 4.7E+02 0.016 24.5 11.0 20 426-445 181-200 (291)
129 3qky_A Outer membrane assembly 22.9 4E+02 0.014 23.6 12.1 107 361-480 110-228 (261)
130 2y4t_A DNAJ homolog subfamily 22.6 5E+02 0.017 24.6 10.8 52 427-480 193-244 (450)
131 3hym_B Cell division cycle pro 22.4 4.1E+02 0.014 23.6 11.5 53 426-480 140-192 (330)
132 2vsy_A XCC0866; transferase, g 22.1 4.1E+02 0.014 27.1 10.0 52 426-479 106-160 (568)
133 1evs_A Oncostatin M; 4-helix b 21.6 7.3 0.00025 37.0 -2.8 77 266-364 111-187 (187)
134 1u2m_A Histone-like protein HL 21.6 29 0.00098 30.5 1.1 85 338-422 17-105 (143)
135 2kc7_A BFR218_protein; tetratr 21.5 2.5E+02 0.0086 20.8 8.0 56 426-482 15-70 (99)
136 3thf_A Protein shroom; coiled- 21.5 67 0.0023 31.1 3.6 40 447-500 133-172 (190)
137 4f3v_A ESX-1 secretion system 21.4 6E+02 0.02 25.1 11.1 117 361-479 115-240 (282)
138 2d9n_A Cleavage and polyadenyl 21.4 28 0.00096 28.1 0.9 18 55-72 53-73 (77)
139 2e2e_A Formate-dependent nitri 20.8 3.6E+02 0.012 22.3 9.8 51 428-480 98-148 (177)
140 3p0c_A Nischarin; structural g 20.6 46 0.0016 29.2 2.2 20 424-443 91-110 (130)
141 4az9_A Sorting nexin-24; prote 20.4 49 0.0017 29.1 2.4 29 425-456 94-122 (129)
142 1m1j_A Fibrinogen alpha subuni 20.3 7.6E+02 0.026 26.9 11.7 81 429-520 68-148 (491)
143 2lni_A Stress-induced-phosphop 20.3 2.8E+02 0.0097 20.9 10.7 104 361-501 29-133 (133)
No 1
>3k66_A Beta-amyloid-like protein; X-RAY amyloid precursor protein, heparin binding, alternative splicing, developmental protein, differentiation; 2.70A {Caenorhabditis elegans} PDB: 3k6b_A*
Probab=100.00 E-value=2.3e-84 Score=634.40 Aligned_cols=213 Identities=39% Similarity=0.614 Sum_probs=207.3
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhh
Q psy5197 326 PDPYFTHFEPKDEHHAFKEALQRLEEMHREKVTKVMKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGN 405 (564)
Q Consensus 326 ~D~Yfe~~~~~~EH~~F~~Ak~~LE~rhr~rm~~VmKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a 405 (564)
.|+||++|+++|||++|++||++||++||+||++|||||+|||+||+|||++|||+|++|||+||+|||++|+|||+|++
T Consensus 2 ~D~Yf~~~~~~~EH~~f~~Ak~rLe~~hr~km~kVMkEW~Eae~q~k~l~kaDpk~Ae~~k~~m~~rFQ~~v~sLEqE~a 81 (239)
T 3k66_A 2 QDPYFKIANWTNEHDDFKKAEMRMDEKHRKKVDKVMKEWGDLETRYNEQKAKDPKGAEKFKSQMNARFQKTVSSLEEEHK 81 (239)
T ss_dssp CCGGGGCSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH--ccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhh
Q psy5197 406 AEKHQLIVMHQQRVAARINQHKKDAMNCYIEAL--NDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVK 483 (564)
Q Consensus 406 ~ErqqLvetH~aRVeA~LNdrRR~Ale~Yl~AL--q~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaq 483 (564)
+||||||+||++||+|+||+|||.||+||++|| |++||++|+||+|||+||||++|||+|||+||+||+++||++|++
T Consensus 82 ~ErqqL~etH~qRV~a~LNerrr~Ale~y~~AL~~q~~pP~~~~Vl~aLk~yiRae~KDR~Htl~hy~Hl~~~dpe~A~~ 161 (239)
T 3k66_A 82 RMRKEIEAVHEERVQAMLNEKKRDATHDYRQALATHVNKPNKHSVLQSLKAYIRAEEKDRMHTLNRYRHLLKADSKEAAA 161 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHHHHH
Confidence 999999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhhchhhHHHhHHHHHHHHHHhhccCCCCccccc
Q psy5197 484 EKPMTLEHLVDIDHTINQSMTMLQRHPALAVKISELMQDYMQALRSKDETPGSLLS 539 (564)
Q Consensus 484 mk~qvltHL~vIeeRmNQSLsLLyr~P~la~eI~~~idellq~~Rs~~d~p~~l~s 539 (564)
||++||+||++||+||||||+|||++|.|+.+|+++|++|++++| +..||...+.
T Consensus 162 ~k~~vl~hL~~Id~r~NqSL~lL~~~P~L~~~vrp~i~~~~~~~r-~~~~~~~~~~ 216 (239)
T 3k66_A 162 YKPTVIHRLRYIDLRINGTLAMLRDFPDLEKYVRPIAVTYWKDYR-DEVSPDISVE 216 (239)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTTHHHHHHHHHHHH-HHHSCCCCSC
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHhHHHHHHHHHHh-cccCCccccc
Confidence 999999999999999999999999999999999999999999999 4556665444
No 2
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=100.00 E-value=4.5e-84 Score=627.16 Aligned_cols=206 Identities=28% Similarity=0.462 Sum_probs=190.2
Q ss_pred CCCCCC--CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHH
Q psy5197 320 TTRVPT--PDPYFTHFEPKDEHHAFKEALQRLEEMHREKVTKVMKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTV 397 (564)
Q Consensus 320 ~t~~pt--~D~Yfe~~~~~~EH~~F~~Ak~~LE~rhr~rm~~VmKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V 397 (564)
+|++|| +|+||++|+++|||++|++||++||++||+||++|||||+||++|||||||+| ||+||+|||++|
T Consensus 6 ~~~~~td~vD~Yf~~~~~~~EH~~f~~Ak~rLe~~hr~k~~~VmkEW~eae~q~k~lpkad-------kk~m~~rFQ~~v 78 (219)
T 3pmr_A 6 PTPRPTDGVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKAD-------RQALNEHFQSIL 78 (219)
T ss_dssp ------CHHHHHHCSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCHHH-------HHHHHHHHHHHH
T ss_pred CCCCCCCccchhhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH-------HHHHHHHHHHHH
Confidence 444554 68899999999999999999999999999999999999999999999995544 999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcC
Q psy5197 398 QSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATN 477 (564)
Q Consensus 398 ~sLEeE~a~ErqqLvetH~aRVeA~LNdrRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avd 477 (564)
+|||+|+++||||||+||++||+|+||+|||.||+||++|||++||++|+||+|||+||||++|||+|||+||+||+++|
T Consensus 79 ~aLE~E~~~ErqqL~etH~~RV~a~Ln~rrr~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~d 158 (219)
T 3pmr_A 79 QTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVD 158 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhcchhHHHHHHHHHHHhhhhhhhhhhchhhHHHhHHHHHHHHHHhhccCC
Q psy5197 478 LDFAVKEKPMTLEHLVDIDHTINQSMTMLQRHPALAVKISELMQDYMQALRSKDE 532 (564)
Q Consensus 478 PekAaqmk~qvltHL~vIeeRmNQSLsLLyr~P~la~eI~~~idellq~~Rs~~d 532 (564)
|++|++||++|||||++||+||||||+|||++|.|+.+|+++|++|||+.++.++
T Consensus 159 pe~A~~~k~~vl~hL~~Id~r~NqSL~lL~~~P~l~~~i~~~i~~ll~~~~~~~~ 213 (219)
T 3pmr_A 159 PEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQELRPQIQELLHSEHLGPS 213 (219)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHC-------
T ss_pred HHHHhhcchHHHHHHHHHHHHHhhhHHHHHcCchHHHHHhHHHHHHHHhhccCCc
Confidence 9999999999999999999999999999999999999999999999999997663
No 3
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=100.00 E-value=1.2e-82 Score=614.29 Aligned_cols=203 Identities=31% Similarity=0.516 Sum_probs=178.5
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhh
Q psy5197 325 TPDPYFTHFEPKDEHHAFKEALQRLEEMHREKVTKVMKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEG 404 (564)
Q Consensus 325 t~D~Yfe~~~~~~EH~~F~~Ak~~LE~rhr~rm~~VmKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~ 404 (564)
.+|+||++|+++|||++|++||++||++||+||++|||||+|||+|||||||+| ||+||+|||++|+|||+|+
T Consensus 6 ~vD~Yf~~~~~~~EH~~f~~Ak~~Le~~hr~k~~~VmkEW~eae~q~k~l~kad-------kk~~~~rFQ~~v~aLE~E~ 78 (211)
T 3umh_A 6 AVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKAD-------KKAVIQHFQEKVESLEQEA 78 (211)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHH-------HHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-------HHHHHHHHHHHHHHHhhhh
Confidence 379999999999999999999999999999999999999999999999997766 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhc
Q psy5197 405 NAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKE 484 (564)
Q Consensus 405 a~ErqqLvetH~aRVeA~LNdrRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqm 484 (564)
++||||||+||++||+|+||+|||.||+||++|||++||+||+||+|||+||||++|||+|||+||+||+++||++|++|
T Consensus 79 ~~ErqqL~etH~qRV~a~ln~rrr~Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti~hy~Hv~~~dpe~A~~~ 158 (211)
T 3umh_A 79 ANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 158 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHhhhhhhhhhhchhhHHHhHHHHHHHHHHhhccCCCC
Q psy5197 485 KPMTLEHLVDIDHTINQSMTMLQRHPALAVKISELMQDYMQALRSKDETP 534 (564)
Q Consensus 485 k~qvltHL~vIeeRmNQSLsLLyr~P~la~eI~~~idellq~~Rs~~d~p 534 (564)
|++|+|||++||+||||||+|||++|.|+.+|+++|++|||++++.+|.+
T Consensus 159 k~~v~~hL~~id~r~NqsL~lL~~~P~l~~~i~~~~~e~l~~~~~~~~~~ 208 (211)
T 3umh_A 159 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDI 208 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGSHHHHHHHHHHHHHHHC---------
T ss_pred chHHHHHHHHHHHHHhHhHHHHHhCcHHHHHHHHHHHHHHHHHhccchhh
Confidence 99999999999999999999999999999999999999999999888764
No 4
>3ktm_A Amyloid beta A4 protein; protein structure, alzheimer disease, amyloidosis, apoptosis, cell adhesion, copper, disease mutation, disulfi endocytosis; 2.70A {Homo sapiens} PDB: 1owt_A 2fkl_A
Probab=100.00 E-value=3.9e-63 Score=470.98 Aligned_cols=116 Identities=49% Similarity=1.019 Sum_probs=114.1
Q ss_pred CCCCCccccccccCcccccccccccCCCCCC-CCceeeeeeccCCCcCCCccccCCccccccccCcccccchhhhHHhHH
Q psy5197 1 IYPKHDITNIVESSNYVKITNWCKVGHSKCK-HTDWVKPYRCLEGPFQSDALLVPEHCVFDHIHNQSKCWEYERWNQTAA 79 (564)
Q Consensus 1 vYP~lqITNVVEa~q~V~I~nWCk~g~~~Ck-h~h~V~PyRCLvGeFvSDaLLVPe~CkF~H~e~md~C~~~~~Wh~vAk 79 (564)
|||+|||||||||||||+|+||||+|+++|| |+|||+|||||||+|+|||||||++|+|+|+|+|++|++|+|||++|+
T Consensus 60 vYPel~ItNVVEAs~~V~I~nWCk~~~~~Ck~~~h~V~PyRCLvGeF~SdaLlVPe~C~F~H~~~~~~C~~~~~W~~~A~ 139 (191)
T 3ktm_A 60 VYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAK 139 (191)
T ss_dssp HCTTSCEEEEEECSSCEEECCCCCSSCSCCCCCCEEECCEEEEESSCCCCCCCCCTTCEEEEEECTTCCBCHHHHHHHHH
T ss_pred HCCCccccCccccCcceeecccccccCcccCCCCcEEeceeccCCCccCCCccCCCcceecccCccccccChhhhhhhhH
Confidence 7999999999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccceecccccccCccceeeeeccCCCch
Q psy5197 80 QSCLERDLSLRSFAMLLPCGISLFAGVEFVCCPMKDK 116 (564)
Q Consensus 80 eaC~~~~m~LhsygMLLPCGid~F~GVEfVCCP~~~~ 116 (564)
++|+++||+|||||||||||+|+|+||||||||..+.
T Consensus 140 e~C~~~~m~l~s~gmLlPCg~d~F~GvEfVCCP~~~~ 176 (191)
T 3ktm_A 140 ETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAIE 176 (191)
T ss_dssp HHHHHTTCEEEEEEEEEEEETTEEEEEEEEEECSEET
T ss_pred hhHhhcCceeeccccccccccccceeeEEeecCCCcc
Confidence 9999999999999999999999999999999998763
No 5
>2fma_A Amyloid beta A4 protein precursor; alpha-beta two-layered sandwich, metal binding protein; 0.85A {Homo sapiens} PDB: 2fjz_A 2fk2_A 2fk3_A 2fk1_A
Probab=100.00 E-value=2e-36 Score=241.14 Aligned_cols=59 Identities=44% Similarity=0.972 Sum_probs=58.0
Q ss_pred CccccccccCcccccchhhhHHhHHhhcccccccccceecccccccCccceeeeeccCC
Q psy5197 55 EHCVFDHIHNQSKCWEYERWNQTAAQSCLERDLSLRSFAMLLPCGISLFAGVEFVCCPM 113 (564)
Q Consensus 55 e~CkF~H~e~md~C~~~~~Wh~vAkeaC~~~~m~LhsygMLLPCGid~F~GVEfVCCP~ 113 (564)
|+|+|+|+|+|++|++|+|||+||+++|++++|+|||||||||||||+|+||||||||+
T Consensus 1 e~C~F~H~~~~~~C~~~~~W~~~A~eaC~~~~m~L~s~amLlPCg~d~F~GvEfVCCP~ 59 (59)
T 2fma_A 1 EACKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPL 59 (59)
T ss_dssp CCCEEEEEECSSCCBCHHHHHHHHHHHHHHTTEEEEEEEEEEEETTTEEEEEEEEEEEC
T ss_pred CCceeeeeccchhccChHHHHHHHHHHHhhcCceEEeeeeeeccCCCceeeeEEecCCC
Confidence 68999999999999999999999999999999999999999999999999999999995
No 6
>1mwp_A Amyloid A4 protein; heparin binding, sugar binding protein; 1.80A {Homo sapiens} SCOP: d.170.2.1
Probab=99.90 E-value=2.7e-25 Score=192.60 Aligned_cols=47 Identities=53% Similarity=1.113 Sum_probs=46.1
Q ss_pred CCCCCccccccccCcccccccccccCCCCCC-CCceeeeeeccCCCcC
Q psy5197 1 IYPKHDITNIVESSNYVKITNWCKVGHSKCK-HTDWVKPYRCLEGPFQ 47 (564)
Q Consensus 1 vYP~lqITNVVEa~q~V~I~nWCk~g~~~Ck-h~h~V~PyRCLvGeFv 47 (564)
|||+|||||||||||||+|+||||.|+++|| |+|||+|||||||+||
T Consensus 49 vYP~l~ItnVveas~~v~i~~WC~~~~~~Ck~~~h~V~PyrCL~G~F~ 96 (96)
T 1mwp_A 49 VYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFV 96 (96)
T ss_dssp HSTTSCEEEEEECSSCEEECCEEEGGGEEEECCCEEECCEEEEECCCC
T ss_pred HCCCCccceeEecCCceeecccccccCcccCCCCcEEeeeeccccccC
Confidence 7999999999999999999999999999999 8999999999999997
No 7
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=99.50 E-value=2.6e-18 Score=152.93 Aligned_cols=71 Identities=44% Similarity=0.807 Sum_probs=63.4
Q ss_pred CCCceeeeeehhhhhHHHHHHHHHHhhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 208 SKGVYVTVVFAGLAVMAAVFIAMTVLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 208 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
++++++.++|+|+++++++++++++++||...+.+ +|||+||+.+|||||||+|||+|||||||||||+.-
T Consensus 28 ~~~a~igL~v~~vai~~viVv~l~v~rrr~~~~~s---------~GfvEVDp~~TPEERHva~MQ~nGYENPTYKffE~~ 98 (122)
T 2lp1_A 28 NKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIH---------HGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQM 98 (122)
Confidence 45678999999999999999999999877644433 899999999999999999999999999999999743
No 8
>3dxe_B Amyloid beta A4 protein; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} PDB: 3dxc_B 3dxd_B 2roz_A
Probab=99.01 E-value=1.7e-11 Score=88.01 Aligned_cols=32 Identities=63% Similarity=1.068 Sum_probs=25.5
Q ss_pred cccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 256 EVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 256 ~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
.||...+|||||++|||+||||||||||||..
T Consensus 2 ~vdp~~tpEErh~~~mQ~~GYENPTYkyfE~~ 33 (35)
T 3dxe_B 2 AMDAAVAPEERHLSKMQQNGYENPTYKFFEQM 33 (35)
T ss_dssp -----CCHHHHHHHHHHHTCEECHHHHHHHHC
T ss_pred CcCcccChhHHHHHHHHhccCcCcHHHHHHhc
Confidence 36889999999999999999999999999743
No 9
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=98.42 E-value=1.1e-07 Score=90.91 Aligned_cols=36 Identities=58% Similarity=0.864 Sum_probs=31.9
Q ss_pred cccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 252 QGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 252 ~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
-+-.++|.+.||||||++|||+||||||||+||+.+
T Consensus 148 ~~~~~~~~~~t~eer~~~~m~~~~~~~~~~~~~~~~ 183 (185)
T 2ysz_A 148 SSGSSGDAAVTPEERHLSKMQQNGYENPTYKFFEQM 183 (185)
T ss_dssp SCSSSCSCCCCHHHHHHHHHTTTCEECSSCCCSCCC
T ss_pred cccCcCCcccCHHHHHHHHHHHcCCCCcchhhhhcc
Confidence 445577889999999999999999999999999865
No 10
>2yt0_A Amyloid beta A4 protein and amyloid beta A4 precursor protein-binding family B member...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus} PDB: 2yt1_A
Probab=97.76 E-value=7.6e-06 Score=77.86 Aligned_cols=31 Identities=68% Similarity=1.070 Sum_probs=28.9
Q ss_pred ccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 257 VDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 257 ~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
++..+||||||++|||+||||||+|+||+.+
T Consensus 7 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 37 (176)
T 2yt0_A 7 GDAAVTPEERHLSKMQQNGYENPTYKFFEQM 37 (176)
T ss_dssp CCCCCCHHHHHHHHHHHTCEECSHHHHTTSC
T ss_pred CCCCcCcHHHHHHHHHHhCCcCccHHHHHhc
Confidence 4788999999999999999999999999866
No 11
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=87.46 E-value=9.3 Score=32.11 Aligned_cols=122 Identities=16% Similarity=0.104 Sum_probs=71.5
Q ss_pred hHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHcc--------CCCChh-------HH-HHHHHHHHHHHhhhhhhHHH
Q psy5197 406 AEKHQLIVMHQQRVAARINQ-HKKDAMNCYIEALND--------VSLNTH-------KV-QKCLQKLLRALHKDRHHTIA 468 (564)
Q Consensus 406 ~ErqqLvetH~aRVeA~LNd-rRR~Ale~Yl~ALq~--------~pP~ph-------rV-l~aLkrYvRAe~KDR~HTir 468 (564)
.||-+.++....+=.+.+.. +-..|+..|..||.. +|..+. .+ +-.....+-...++-.-.|.
T Consensus 5 ~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 5 DDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 34555555555555555544 346889999998886 343321 11 11122333334556667888
Q ss_pred HHHHHhhcChh--HHhhcchhHHHHHHHHHHHhhhhhhhhhhchhhHHHhHHHHHHHHHHh
Q psy5197 469 HYKHLLATNLD--FAVKEKPMTLEHLVDIDHTINQSMTMLQRHPALAVKISELMQDYMQAL 527 (564)
Q Consensus 469 HYqHv~avdPe--kAaqmk~qvltHL~vIeeRmNQSLsLLyr~P~la~eI~~~idellq~~ 527 (564)
+|+.++..||. +|--.+-.++..|...++-+..--..|.-.|.-...|+..+..+.+.+
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~ 145 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERR 145 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 99999998887 555566777777777776665544555556766656665555544433
No 12
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=85.21 E-value=0.18 Score=38.27 Aligned_cols=29 Identities=21% Similarity=0.604 Sum_probs=26.6
Q ss_pred CCCceeeeeehhhhhHHHHHHHHHHhhhh
Q psy5197 208 SKGVYVTVVFAGLAVMAAVFIAMTVLKRR 236 (564)
Q Consensus 208 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~ 236 (564)
++++++.+.|+|++.+++++++++++|||
T Consensus 15 srga~iGL~v~gVai~~vIVvsl~mlRrr 43 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVIVITLVMLKKK 43 (43)
Confidence 56788999999999999999999999986
No 13
>2ddi_A WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1; kunitz domain, protein binding; NMR {Homo sapiens} PDB: 2ddj_A
Probab=84.84 E-value=0.1 Score=42.55 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=30.7
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
++||+++...++|..|+| +||.+ |.|+|.+..-|...+.
T Consensus 23 ~~rwyYd~~t~~C~~F~Y-gGC~G---------------N~NnF~t~~eC~~~C~ 61 (70)
T 2ddi_A 23 EPRWAYSPLLQQCHPFVY-GGCEG---------------NGNNFHSRESCEDACP 61 (70)
T ss_dssp EEEEEEEGGGTEEEEEEE-CSSSC---------------CSCCBSSHHHHHHHSC
T ss_pred eeEEEEECCCCeeeeeEC-CCcCC---------------CCCCCCCHHHHHhHcc
Confidence 789999999999999999 67764 5688887666554444
No 14
>1bf0_A Calcicludine; calcium channel blocker; NMR {Dendroaspis angusticeps} SCOP: g.8.1.1
Probab=82.34 E-value=0.31 Score=38.15 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=28.4
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKY 283 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~y 283 (564)
+.||+++.-.+.|..|+| +||.+ +.|+|.+..-|.
T Consensus 20 ~~rw~yd~~~~~C~~F~y-gGC~g---------------N~N~F~t~~eC~ 54 (60)
T 1bf0_A 20 FSSFYFKWTAKKCLPFLF-SGCGG---------------NANRFQTIGECR 54 (60)
T ss_dssp EEEEEEETTTTEEEEEEE-CSTTC---------------CSCCBSSTTTTH
T ss_pred eeEEEEeCCCCccEEeec-CCcCC---------------CCcCcCCHHHHH
Confidence 689999999999999999 58865 568888766543
No 15
>1kth_A Collagen alpha 3(VI) chain; anisotropic refinement, kunitz inhibitor, extracellular matrix, connective tissue, structural protein; 0.95A {Homo sapiens} SCOP: g.8.1.1 PDB: 1knt_A 1kun_A 2knt_A
Probab=82.08 E-value=0.33 Score=37.81 Aligned_cols=23 Identities=17% Similarity=0.330 Sum_probs=20.5
Q ss_pred hhhhccCCCCCccccccccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIE 256 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~ 256 (564)
+.||+++.-.++|..|+| +||.+
T Consensus 18 ~~rw~yd~~~~~C~~F~y-gGC~g 40 (58)
T 1kth_A 18 ILKWYYDPNTKSCARFWY-GGCGG 40 (58)
T ss_dssp EEEEEEETTTTEEEEEEE-CSBSC
T ss_pred eeeEEEcCCCCccceeec-CCccC
Confidence 689999999999999999 58875
No 16
>3aub_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 1.00A {Bos taurus} PDB: 3aui_A 3auh_A 3ci7_A
Probab=81.64 E-value=0.34 Score=37.74 Aligned_cols=34 Identities=15% Similarity=0.255 Sum_probs=27.0
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYK 282 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~ 282 (564)
++||+++...++|..|+| +||.+ +.|+|.+..-|
T Consensus 18 ~~rw~yn~~~~~C~~F~y-gGC~g---------------N~NnF~t~~~C 51 (58)
T 3aub_A 18 IIRYFYNAAAGAAQAFVY-GGVRA---------------KRNNFASAADA 51 (58)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSSC---------------CSSCBSSHHHH
T ss_pred eeeEEEECCCCceeEEec-CCcCC---------------CCcCcCCHHHH
Confidence 789999999999999999 57765 56777765443
No 17
>3aug_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, inhibits serine protease, trypsin hydrolase inhibitor; 1.40A {Bos taurus} PDB: 3aue_A 3auc_A 3aud_A 1f7z_I 1f5r_I 3tgi_I 3tgj_I 3tgk_I
Probab=80.67 E-value=0.38 Score=38.38 Aligned_cols=39 Identities=13% Similarity=0.190 Sum_probs=31.3
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
+.||+++.-.++|..|+| +||.+ +.|+|.+.+-|...+.
T Consensus 18 ~~rwyyd~~t~~C~~F~y-gGC~G---------------N~NnF~t~~eC~~~C~ 56 (65)
T 3aug_A 18 IIRYFYNAAAGAAQAFVY-GGVRA---------------KRNNFASAADALAACA 56 (65)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSSC---------------CSSCBSSHHHHHHHHS
T ss_pred eeEEEEECCCCeeeeEec-CCcCC---------------CccCcCCHHHHHhhCc
Confidence 789999999999999999 58865 5688888776655444
No 18
>4dtg_K Tissue factor pathway inhibitor; antibody, blood coagulation, blood clotting inhib immune system complex; HET: MES PGE; 1.80A {Homo sapiens} PDB: 1tfx_C
Probab=80.65 E-value=0.21 Score=40.28 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=28.8
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYF 284 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yf 284 (564)
++||+++...+.|..|+| +||.+ |.|+|.+...|..
T Consensus 20 ~~rwyyd~~t~~C~~F~Y-gGC~G---------------N~NnF~t~~eC~~ 55 (66)
T 4dtg_K 20 ITRYFYNNQTKQCERFKY-GGCLG---------------NMNNFETLEECKN 55 (66)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSSC---------------CSSCBSSHHHHHH
T ss_pred eeEEEEECCCCCEEeeEc-CCCCC---------------CCCCCCCHHHHHH
Confidence 789999999999999999 67764 5688887665543
No 19
>1y62_A Conkunitzin-S1; alpha helix, beta sheet, 310 helix, kunitz fold, toxin; 2.45A {Synthetic} PDB: 1yl2_A 2ca7_A 2j6d_A
Probab=80.49 E-value=0.39 Score=37.62 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=27.4
Q ss_pred HhhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcc
Q psy5197 232 VLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYK 282 (564)
Q Consensus 232 ~~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~ 282 (564)
.++||+++...++|..|+|+ ||.+ +.|+|.+..-|
T Consensus 19 ~~~r~~yd~~~~~C~~F~yg-GC~G---------------N~N~F~t~~eC 53 (60)
T 1y62_A 19 AEKRIYYNSARKQCLRFDYT-GQGG---------------NENNFRRTYDC 53 (60)
T ss_dssp CEEEEEEETTTTEEEEEEEC-SSCC---------------CSCCBSSHHHH
T ss_pred CeeEEEEeCCCCcccEeECC-CcCC---------------CCcCcCCHHHH
Confidence 37899999999999999995 8764 56777765443
No 20
>1aap_A Alzheimer'S disease amyloid A4 protein; proteinase inhibitor (trypsin); 1.50A {Homo sapiens} SCOP: g.8.1.1 PDB: 1taw_B 1brc_I 1zjd_B 3l3t_E 1ca0_D 3l33_E
Probab=80.48 E-value=0.32 Score=37.77 Aligned_cols=23 Identities=26% Similarity=0.455 Sum_probs=20.4
Q ss_pred hhhhccCCCCCccccccccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIE 256 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~ 256 (564)
+.||+++.-..+|..|+| +||.+
T Consensus 18 ~~rw~yd~~~~~C~~F~y-gGC~g 40 (58)
T 1aap_A 18 ISRWYFDVTEGKCAPFFY-GGCGG 40 (58)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSSC
T ss_pred eeeEEEECCCCeEeeeec-CCcCC
Confidence 689999999999999999 67764
No 21
>1dtk_A Dendrotoxin K; presynaptic neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.8.1.1
Probab=80.39 E-value=0.4 Score=37.23 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=20.5
Q ss_pred hhhhccCCCCCccccccccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIE 256 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~ 256 (564)
++||+++.-.++|..|+| +||.+
T Consensus 18 ~~rw~yd~~~~~C~~F~y-~GC~g 40 (57)
T 1dtk_A 18 IPSFYYKWKAKQCLPFDY-SGCGG 40 (57)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSSC
T ss_pred cceEEEcCCCCcCcEEEc-CCcCC
Confidence 789999999999999999 58865
No 22
>1zr0_B TFPI-2, tissue factor pathway inhibitor 2, PP5; serine protease, complex of serine protease/inhibitor, kunitz type inhibitor; 1.80A {Homo sapiens} SCOP: g.8.1.1
Probab=78.77 E-value=0.48 Score=37.33 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=27.1
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYK 282 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~ 282 (564)
+.||+++.-.++|..|+| +||.+ +.|+|.+..-|
T Consensus 22 ~~rw~yd~~~~~C~~F~y-gGC~g---------------N~N~F~t~~eC 55 (63)
T 1zr0_B 22 LLRYYYDRYTQSCRQFLY-GGCEG---------------NANNFYTWEAC 55 (63)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSCC---------------CSSCBSSHHHH
T ss_pred eeEEEEeCCCCeEEEEec-CCcCC---------------CccCcCCHHHH
Confidence 789999999999999999 47764 56777765544
No 23
>1yc0_I Kunitz-type protease inhibitor 1; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens}
Probab=78.47 E-value=0.49 Score=38.91 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=27.4
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYK 282 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~ 282 (564)
++||+++.-.+.|..|+|+ ||.+ |.|+|.+.+-|
T Consensus 35 ~~rwyYd~~t~~C~~F~Yg-GC~G---------------N~NnF~t~~eC 68 (75)
T 1yc0_I 35 FPRWYYDPTEQICKSFVYG-GCLG---------------NKNNYLREEEC 68 (75)
T ss_dssp EEEEEEETTTTEEEEEEEC-SSSC---------------CSSCBSSHHHH
T ss_pred eeEEEEECCCCeeeEeEcC-CccC---------------CCcCcCCHHHH
Confidence 6899999999999999995 8865 56777775544
No 24
>1g6x_A Pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 0.86A {Bos taurus} SCOP: g.8.1.1 PDB: 1k6u_A 1qlq_A 4tpi_I 1ld5_A 3btq_I 3bth_I 1t8m_B 5pti_A 1b0c_A 1bhc_A* 1bth_P 1bz5_A 1bzx_I 1cbw_D 1d0d_B 1eaw_B 1fy8_I 1mtn_D 1oa5_5 1oa6_5 ...
Probab=78.02 E-value=0.52 Score=36.54 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=26.9
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYK 282 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~ 282 (564)
+.||+++.-.++|..|+| +||.+ +.|+|.+..-|
T Consensus 18 ~~rw~yd~~~~~C~~F~y-gGC~g---------------N~N~F~t~~eC 51 (58)
T 1g6x_A 18 IIRYFYNAKAGLCQTFVY-GGCRA---------------KRNNFKSAEDC 51 (58)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSSC---------------CSSCBSSHHHH
T ss_pred eeEEEEECCCCceeEEec-CCcCC---------------CCcCcCCHHHH
Confidence 789999999999999999 58864 56777765443
No 25
>1irh_A Tissue factor pathway inhibitor; non-protease inhibitor, kunitz domain, protein binding; NMR {Homo sapiens} SCOP: g.8.1.1
Probab=77.91 E-value=0.45 Score=37.33 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=27.3
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYK 282 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~ 282 (564)
+.||+++.-.++|..|+| +||.+ +.|+|.+..-|
T Consensus 21 ~~rw~yd~~~~~C~~F~y-~GC~g---------------N~N~F~t~~eC 54 (61)
T 1irh_A 21 ENRFYYNSVIGKCRPFKY-SGCGG---------------NENNFTSKQEC 54 (61)
T ss_dssp CCEEEECTTTCSEEEECC-CCSSC---------------CSCCBSSSHHH
T ss_pred eeEEEEeCCCCcceEEEe-CCcCC---------------CCCCcCCHHHH
Confidence 689999999999999999 58864 56777775544
No 26
>3byb_A Textilinin, textilinin-1; BPTI-like, beta hairpin, kunitz-type protease inhibitor, trypsin, plasmin, hydrolase inhibitor; 1.63A {Pseudonaja textilis textilis} PDB: 3d65_I
Probab=77.71 E-value=0.54 Score=36.58 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.7
Q ss_pred HhhhhccCCCCCccccccccccccc
Q psy5197 232 VLKRRSARSPQNLCNVFFYFQGFIE 256 (564)
Q Consensus 232 ~~~r~~~~~p~~~~~~~~y~~G~~~ 256 (564)
.++||+++.-.+.|..|+|+ ||.+
T Consensus 19 ~~~rw~yn~~~~~C~~F~yg-GC~g 42 (59)
T 3byb_A 19 RFPSFYYNPDEKKCLEFIYG-GCEG 42 (59)
T ss_dssp CEEEEEEETTTTEEEEEEEC-SSCC
T ss_pred CeeEEEEECCCCEEeEEECC-CcCC
Confidence 37899999999999999995 8864
No 27
>1dtx_A Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {Dendroaspis angusticeps} SCOP: g.8.1.1 PDB: 1dem_A 1den_A
Probab=76.98 E-value=0.58 Score=36.46 Aligned_cols=23 Identities=13% Similarity=0.184 Sum_probs=20.3
Q ss_pred hhhhccCCCCCccccccccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIE 256 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~ 256 (564)
++||+++.-..+|..|+| +||.+
T Consensus 20 ~~r~~yn~~~~~C~~F~y-~GC~g 42 (59)
T 1dtx_A 20 IPAFYYNQKKKQCERFDW-SGCGG 42 (59)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSCC
T ss_pred eeEEEEecCCCCCeEeec-CCcCC
Confidence 689999999999999999 57764
No 28
>1jc6_A Venom basic protease inhibitors IX and VIIIB; snake venom, kunitz inhibitor, neurotoxin, solution structure, BF IX, chymotrypsin inhibitor; NMR {Bungarus fasciatus} SCOP: g.8.1.1
Probab=76.66 E-value=0.65 Score=36.98 Aligned_cols=39 Identities=15% Similarity=0.098 Sum_probs=30.0
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
++||+++.-...|..|+| +||.+ +.|+|.+..-|...+.
T Consensus 20 ~~r~yyd~~~~~C~~F~y-gGC~G---------------N~NnF~t~~eC~~~C~ 58 (65)
T 1jc6_A 20 IPAFYYNSHLHKCQKFNY-GGCGG---------------NANNFKTIDECQRTCA 58 (65)
T ss_dssp CCEEEEETTTTEEEEECC-CSSCC---------------CSSCBSSHHHHHHHTS
T ss_pred eeEEEEECCCCeeeeeec-CCcCC---------------CCCCcCCHHHHHhhcc
Confidence 689999999999999999 67764 5678887665544433
No 29
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=76.65 E-value=31 Score=29.23 Aligned_cols=103 Identities=10% Similarity=0.069 Sum_probs=60.7
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH--hhcchhHHHHHHHHHHH---h
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA--VKEKPMTLEHLVDIDHT---I 499 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA--aqmk~qvltHL~vIeeR---m 499 (564)
.+-..|++.|..+|..+|.++.-.... -.+-...++-.-.+..|+.++..+|.-+ --..-.++..+..+++- .
T Consensus 35 g~~~~A~~~~~~al~~~p~~~~~~~~l--g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 112 (148)
T 2vgx_A 35 GXYEDAHXVFQALCVLDHYDSRFFLGL--GACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGL 112 (148)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCcccHHHHHHH--HHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHH
Confidence 344689999999999998887554332 2333455666678899999999998743 22233344444444432 3
Q ss_pred hhhhhhhhhchhhHHHhHHHHHHHHHHhhcc
Q psy5197 500 NQSMTMLQRHPALAVKISELMQDYMQALRSK 530 (564)
Q Consensus 500 NQSLsLLyr~P~la~eI~~~idellq~~Rs~ 530 (564)
+++|.+--..|.. ..+...+..++..++.+
T Consensus 113 ~~al~~~p~~~~~-~~~~~~~~~~l~~l~~~ 142 (148)
T 2vgx_A 113 FLAQELIANXPEF-XELSTRVSSMLEAIKLK 142 (148)
T ss_dssp HHHHHHHTTCGGG-HHHHHHHHHHHHHC---
T ss_pred HHHHHHCcCCCcc-hHHHHHHHHHHHHHHhH
Confidence 3444444445554 34566666666666644
No 30
>2kcr_A Anntoxin; protein; NMR {Hyla annectans}
Probab=76.51 E-value=0.67 Score=36.27 Aligned_cols=23 Identities=17% Similarity=0.281 Sum_probs=20.3
Q ss_pred hhhhccCCCCCccccccccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIE 256 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~ 256 (564)
+.||+++.-.+.|..|+| +||.+
T Consensus 20 ~~r~yyd~~~~~C~~F~y-~GC~g 42 (61)
T 2kcr_A 20 FTNYYYDKATSSCKTFRY-RGSGG 42 (61)
T ss_dssp CCEEEEETTTTEEEEECC-CSSSC
T ss_pred eeEEEEeCCCCcceEEEc-CCcCC
Confidence 789999999999999999 58865
No 31
>1co7_I BPTI, bovine pancreatic trypsin inhibitor; complex (serine protease/inhibitor), hydrolase/hydrolase inhibitor complex; 1.90A {Bos taurus} SCOP: g.8.1.1
Probab=76.33 E-value=0.36 Score=41.51 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=25.7
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
++||+++...++|..|+| +||.+ |.|+|++.+-|...|.
T Consensus 52 ~~rw~yd~~~~~C~~F~y-gGC~G---------------N~NnF~t~~eC~~~C~ 90 (99)
T 1co7_I 52 IIRYFYNAKAGLCQTFVY-GGCRA---------------KRNNFKSAEDCMRTCG 90 (99)
T ss_dssp EEEEEET----TEEEEEE-CSSSC---------------CSSCBSSHHHHHC---
T ss_pred eeEEEEECCCCceeEEee-CCcCC---------------CCCCcCCHHHHHHHCc
Confidence 689999999999999999 58865 5688888766654444
No 32
>1bun_B BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: g.8.1.1
Probab=74.92 E-value=0.56 Score=36.79 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=27.5
Q ss_pred HhhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcc
Q psy5197 232 VLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYK 282 (564)
Q Consensus 232 ~~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~ 282 (564)
.+.||+++...+.|..|+| +||.+ +.|+|++..-|
T Consensus 19 ~~~r~~yn~~~~~C~~F~y-gGC~g---------------N~N~F~t~~eC 53 (61)
T 1bun_B 19 VVRAFYYKPSAKRCVQFRY-GGCNG---------------NGNHFKSDHLC 53 (61)
T ss_dssp CEEEEEEEGGGTEEEEEEE-CSCCS---------------SSCCBSSHHHH
T ss_pred CeeEEEEECCCCcceEEec-CCcCC---------------CccCcCCHHHH
Confidence 3789999999999999999 58864 46777765544
No 33
>3m7q_B Kunitz-type proteinase inhibitor SHPI-1; trypsin-inhibitor complex, kunitz-type serine-protease inhib digestion, disulfide bond; 1.70A {Stichodactyla helianthus} SCOP: g.8.1.1 PDB: 3ofw_A 1shp_A 3t62_D 3uou_B
Probab=74.59 E-value=0.4 Score=37.57 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=27.7
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKY 283 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~y 283 (564)
++||+++.....|..|+| +||.+ +.|+|.+...|.
T Consensus 20 ~~rwyyd~~~~~C~~F~y-~GC~G---------------N~N~F~t~~~C~ 54 (61)
T 3m7q_B 20 FPRFYFDSETGKCTPFIY-GGCGG---------------NGNNFETLHQCR 54 (61)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSSC---------------CSSCBSSHHHHH
T ss_pred eeEEEEECCCCcEEeEEe-CCcCC---------------CCCCCCCHHHHH
Confidence 689999999999999999 57764 567777755543
No 34
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.40 E-value=16 Score=29.73 Aligned_cols=51 Identities=14% Similarity=0.006 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 427 KKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 427 RR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
-..|..-+..||+.||=++.-.+-. -.+...+.|=.-.|.+|+.++..||.
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~l--g~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLI--ANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHH--HHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4689999999999999888765544 33445588888999999999999999
No 35
>2jot_A Huwentoxin-11; proteinase inhibitor; NMR {Ornithoctonus huwena}
Probab=73.43 E-value=0.59 Score=36.12 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=17.9
Q ss_pred hhhhccCCCCCccccccccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIE 256 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~ 256 (564)
++||+++ ..+|..|+| +||.+
T Consensus 17 ~~r~~yd--~~~C~~F~y-gGC~g 37 (55)
T 2jot_A 17 FERWYFN--GRTCAKFIY-GGCGG 37 (55)
T ss_dssp CEEEEEE--TTEEEEEEC-CSCSC
T ss_pred cceEEEc--CCcccEeec-CCcCC
Confidence 6899999 789999999 57865
No 36
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=72.91 E-value=32 Score=27.23 Aligned_cols=54 Identities=13% Similarity=0.143 Sum_probs=35.4
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.+-..|++.|..||..+|-++.-.... ..+-...++-.-.+.+|+.++..+|.-
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~~--a~~~~~~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 18 SDWPNAVKAYTEMIKRAPEDARGYSNR--AAALAKLMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHH--HHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 344578888888888887776433222 223334555566788888888888863
No 37
>1adz_A TFPI, EPI, LACI, tissue factor pathway inhibitor; hydrolase, coagulation; NMR {Homo sapiens} SCOP: g.8.1.1
Probab=72.57 E-value=0.74 Score=37.52 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=30.0
Q ss_pred HhhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcccccc
Q psy5197 232 VLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEI 286 (564)
Q Consensus 232 ~~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~ 286 (564)
.+.||+++.-.+.|..|+| +||.+ |.|+|.+..-|...|
T Consensus 26 ~~~r~yyn~~t~~C~~F~Y-gGC~G---------------N~NnF~t~~eC~~~C 64 (71)
T 1adz_A 26 YITRYFYNNQTKQCERFKY-GGCLG---------------NMNNFETLEECKNIC 64 (71)
T ss_dssp CCCEEEEEGGGTEEEEECC-CCSSC---------------CSCCBSSHHHHHHHT
T ss_pred ceeeEEEcCCCCccceEee-CCcCC---------------CccCcCCHHHHHHhc
Confidence 3789999999999999999 58864 567888766554433
No 38
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=71.67 E-value=39 Score=28.38 Aligned_cols=118 Identities=12% Similarity=-0.015 Sum_probs=62.0
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHHH-----HHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHhhhhhHHHHHHH
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQKM-----TLRFQQTVQSLEEEGNAE-KHQLIVMHQQRVAARINQHKKDAMNCY 434 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~l-----~qhFQ~~V~sLEeE~a~E-rqqLvetH~aRVeA~LNdrRR~Ale~Y 434 (564)
+.+|.+|...++.....+|.........- ...|+..++.+++-.... ...-+-..++.+-..++ +-..|++.|
T Consensus 52 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~ 130 (184)
T 3vtx_A 52 IGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMG-EHDKAIEAY 130 (184)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhC-CchhHHHHH
Confidence 46677777766666666665543322210 111222222222211110 01111223333333333 346899999
Q ss_pred HHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH
Q psy5197 435 IEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 435 l~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA 481 (564)
..+|+.+|-++.-....=.-| ...++-.-.+.+|+.++..||..|
T Consensus 131 ~~~l~~~p~~~~~~~~lg~~~--~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 131 EKTISIKPGFIRAYQSIGLAY--EGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHhcchhhhHHHHHHHHH--HHCCCHHHHHHHHHHHHhCCccCH
Confidence 999998887765433322223 345555667889999999998765
No 39
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=69.14 E-value=33 Score=28.03 Aligned_cols=55 Identities=9% Similarity=-0.013 Sum_probs=39.3
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA 481 (564)
.+-..|+..|..||+.+|-++.-.+. .-.+-....+-.-.|.+|+.++..||.-+
T Consensus 31 g~~~~A~~~~~~al~~~P~~~~a~~~--lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 85 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQKEPEREEAWRS--LGLTQAENEKDGLAIIALNHARMLDPKDI 85 (121)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHH--HHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 34568999999999988877654432 23334455666778899999999998743
No 40
>1jad_A PLC-beta, phospholipase C beta; alpha helical coiled coil, hydrolase; 2.40A {Meleagris gallopavo} SCOP: h.4.10.1
Probab=67.90 E-value=76 Score=31.80 Aligned_cols=100 Identities=17% Similarity=0.280 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHhhh---hchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q psy5197 346 LQRLEEMHREKVTKVM---KDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAAR 422 (564)
Q Consensus 346 k~~LE~rhr~rm~~Vm---KEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~ 422 (564)
|..+..+..+.|..|+ |.=.+-|++.+.| .+.-|+.|=.....|+.--+-+..+|++.|..-++.+
T Consensus 140 kk~q~kks~e~i~e~~~ktK~K~e~Er~~rEi-----------n~s~ike~veerkrl~~kQ~k~qEkL~~~h~e~le~l 208 (251)
T 1jad_A 140 KKKLEAKRLDRIQVMMRSTSDKAAQERLKKEI-----------NNSHIQEVVQTIKLLTEKTARYQQKLEEKQAENLRAI 208 (251)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555 3334445555555 5566788888889999999999999999999999998
Q ss_pred hhhhhH---HHHHHHHHHHccCCCChhHHHHHHHHHHHHH
Q psy5197 423 INQHKK---DAMNCYIEALNDVSLNTHKVQKCLQKLLRAL 459 (564)
Q Consensus 423 LNdrRR---~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe 459 (564)
...+.. .+...|-+-+..-|- -|+..++.|+...
T Consensus 209 ~~e~~k~~~~~~~~~q~~~~~l~~---ei~e~~~~~~~~~ 245 (251)
T 1jad_A 209 QEKEGQLQQEAVAEYEEKLKTLTV---EVQEMVKNYMKEV 245 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HHhhhhhHHHHHHHHHHHHhcChH---HHHHHHHHHHhhc
Confidence 887765 345566655555432 7888888887653
No 41
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=65.87 E-value=55 Score=26.88 Aligned_cols=54 Identities=7% Similarity=-0.079 Sum_probs=37.4
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.+-..|++.|..+|..+|-++.-.+.. -.+-...++-.-.+.+|+.++..+|.-
T Consensus 32 g~~~~A~~~~~~al~~~p~~~~~~~~l--g~~~~~~g~~~~A~~~~~~al~~~p~~ 85 (142)
T 2xcb_A 32 GKWDDAQKIFQALCMLDHYDARYFLGL--GACRQSLGLYEQALQSYSYGALMDINE 85 (142)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHHHHhCCccHHHHHHH--HHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 344688999999999888776544322 223334555666888999999988874
No 42
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=64.39 E-value=45 Score=29.06 Aligned_cols=54 Identities=7% Similarity=-0.059 Sum_probs=40.5
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.+-..|+..|..||..+|-++.-.+.. -.+....++-.-.|.+|+.++..+|.-
T Consensus 50 g~~~eA~~~~~~al~~~P~~~~~~~~l--g~~~~~~g~~~~Ai~~~~~al~l~P~~ 103 (151)
T 3gyz_A 50 GRIEEAEVFFRFLCIYDFYNVDYIMGL--AAIYQIKEQFQQAADLYAVAFALGKND 103 (151)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHSSSC
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHH--HHHHHHHccHHHHHHHHHHHHhhCCCC
Confidence 445689999999999998887644332 334445666677899999999999973
No 43
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=60.60 E-value=31 Score=28.32 Aligned_cols=54 Identities=9% Similarity=-0.005 Sum_probs=38.2
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.+-..|++.|..||.-+|-++.-..+ ...+-...++=.-.|..|+.++..+|.-
T Consensus 22 ~~~~~A~~~y~~Al~~~p~~~~~~~n--lg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 22 KDFEKAHVHYDKAIELDPSNITFYNN--KAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHh--HHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 34568999999999999877643322 2333344556667788999999888874
No 44
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=59.72 E-value=72 Score=27.49 Aligned_cols=107 Identities=10% Similarity=-0.077 Sum_probs=61.1
Q ss_pred HhhhhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHH
Q psy5197 358 TKVMKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARIN-QHKKDAMNCYIE 436 (564)
Q Consensus 358 ~~VmKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LN-drRR~Ale~Yl~ 436 (564)
--..++|.+|...++..-...|...+.... .++... +.-....+..+-.+.+. .+-..|+..|..
T Consensus 48 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-----------~~~~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 48 FFKKNEINEAIVKYKEALDFFIHTEEWDDQ-----------ILLDKK---KNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCTTCCCH-----------HHHHHH---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHhcccccchh-----------hHHHHH---HHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 334678888888777654433332110000 011111 11112334333333333 345689999999
Q ss_pred HHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 437 ALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 437 ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
||+.+|.++.-.+..-.-|.. .++-.-.+.+|+.++..+|..
T Consensus 114 al~~~p~~~~~~~~lg~~~~~--~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 114 VLKIDKNNVKALYKLGVANMY--FGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHSTTCHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHhCcccHHHHHHHHHHHHH--cccHHHHHHHHHHHHHHCCCc
Confidence 999998887655554444544 334445789999999998864
No 45
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=58.40 E-value=1.2e+02 Score=29.81 Aligned_cols=89 Identities=11% Similarity=0.074 Sum_probs=43.7
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhhhhhh
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMT 504 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmNQSLs 504 (564)
.+-..|++.|..+++.+|.++.-.+..-. +-...++-.-.+..|+.++..+|.......... +.+...-..
T Consensus 442 ~~~~~A~~~~~~a~~~~p~~~~~~~~l~~--~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~------~~~~~~~~~- 512 (537)
T 3fp2_A 442 EKFNAAIKLLTKACELDPRSEQAKIGLAQ--LKLQMEKIDEAIELFEDSAILARTMDEKLQATT------FAEAAKIQK- 512 (537)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHC--CHHHHHHHH------HHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHH--HHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHh------HHHHHHHHH-
Confidence 45578999999999999877743322222 333455666789999999999987554422111 111111111
Q ss_pred hhhhchhhHHHhHHHHHH
Q psy5197 505 MLQRHPALAVKISELMQD 522 (564)
Q Consensus 505 LLyr~P~la~eI~~~ide 522 (564)
-+...|.+..+|...+..
T Consensus 513 ~~~~~~~~~~~~~~~~~~ 530 (537)
T 3fp2_A 513 RLRADPIISAKMELTLAR 530 (537)
T ss_dssp HHHTC-------------
T ss_pred hccccHHHHHHHhhHHHH
Confidence 224567777666555543
No 46
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=62.95 E-value=2.1 Score=38.69 Aligned_cols=50 Identities=14% Similarity=0.172 Sum_probs=40.2
Q ss_pred hhcchhHHHHHHHHHHHhhhhhh--hhhhchhhHHHhHHHHHHHHHHhhccCCCCc
Q psy5197 482 VKEKPMTLEHLVDIDHTINQSMT--MLQRHPALAVKISELMQDYMQALRSKDETPG 535 (564)
Q Consensus 482 aqmk~qvltHL~vIeeRmNQSLs--LLyr~P~la~eI~~~idellq~~Rs~~d~p~ 535 (564)
.-+---++.+|.+|.+|+|++++ +++..|.+..+ .+.|.++ +..-++-|+
T Consensus 40 vai~~viVv~l~v~rrr~~~~~s~GfvEVDp~~TPE-ERHva~M---Q~nGYENPT 91 (122)
T 2lp1_A 40 VVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPE-ERHLSKM---QQNGYENPT 91 (122)
Confidence 33445569999999999999999 99999999999 7888787 344556666
No 47
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=55.73 E-value=88 Score=26.82 Aligned_cols=53 Identities=9% Similarity=-0.005 Sum_probs=29.6
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
+-..|+..|..+++..|.++.-....-.-|.+ .++-.-.+..|+.++..+|..
T Consensus 140 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~A~~~~~~~~~~~~~~ 192 (243)
T 2q7f_A 140 QPKLALPYLQRAVELNENDTEARFQFGMCLAN--EGMLDEALSQFAAVTEQDPGH 192 (243)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH--HTCCHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhCccc
Confidence 34567777777777766665433333233332 333344566777777766643
No 48
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=55.42 E-value=9.1 Score=35.60 Aligned_cols=53 Identities=11% Similarity=0.000 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
+-..|+..|..+|+.+|.++.-....-.-|. ...+-.-.+.+|+.++..+|..
T Consensus 79 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~--~~g~~~~A~~~~~~al~~~~~~ 131 (368)
T 1fch_A 79 DLPNAVLLFEAAVQQDPKHMEAWQYLGTTQA--ENEQELLAISALRRCLELKPDN 131 (368)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HCcCHHHHHHHHHHHHhcCCCC
Confidence 3457788888888777766543333223232 2333445677777777777653
No 49
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=55.11 E-value=37 Score=26.78 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
+-..|++.|..||..+|-++.-.. ....+-...++-.-.+.+|+.++..+|.
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~--~l~~~~~~~~~~~~A~~~~~~al~~~p~ 75 (137)
T 3q49_B 24 KYPEAAACYGRAITRNPLVAVYYT--NRALCYLKMQQPEQALADCRRALELDGQ 75 (137)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHH--HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHhhCcCcHHHHH--HHHHHHHHhcCHHHHHHHHHHHHHhCch
Confidence 345777777777777766553222 2233333455666677777777777776
No 50
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=55.05 E-value=27 Score=38.47 Aligned_cols=106 Identities=10% Similarity=0.144 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhhhhhhhhhhchhhHHHhHHHHHHH-
Q psy5197 445 THKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMTMLQRHPALAVKISELMQDY- 523 (564)
Q Consensus 445 phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmNQSLsLLyr~P~la~eI~~~idel- 523 (564)
.+.+.+.|..++|..++.+.-.-+.|.. +-..+=.|+.+|+++||--|+.|.-.=.+-++++-+|+-|
T Consensus 83 seqy~k~~~E~Lr~rq~q~~dNdNtynE-----------~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLE 151 (562)
T 3ghg_A 83 SHSLTTNIMEILRGDFSSANNRDNTYNR-----------VSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLE 151 (562)
T ss_dssp HHHHHHHHHHTTSSHHHHHHHHHHHHHH-----------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555677778887777777766666643 3345556667777777666655543333333333333333
Q ss_pred ---------------------------------HHHhhccC------CCCcccccCCHHHHHHHHHHHHHHHHHHhhh
Q psy5197 524 ---------------------------------MQALRSKD------ETPGSLLSLTREAEEAILDKYKAQVIAMQED 562 (564)
Q Consensus 524 ---------------------------------lq~~Rs~~------d~p~~l~s~t~~~e~~~ld~~~~~~~~~q~~ 562 (564)
|.-+-+.+ -+..++|.|.+=-.- |...||...+..+.+
T Consensus 152 vDIdiqirsCKgsCsr~~~~~vd~~sY~~~QKQLeQv~a~dL~p~~~~q~Lp~lKmrP~kD~-Vp~~fKsq~q~~~~e 228 (562)
T 3ghg_A 152 VDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSRDRQHLPLIKMKPVPDL-VPGNFKSQLQKVPPE 228 (562)
T ss_dssp HHHHHHHHHGGGTBSCCCCCCCCHHHHHHHHHHHHHHHTTCCCCSCCCC-----------------------------
T ss_pred HHHHHHHHhccccccchheeecchHHHHHHHHHHHHHhhcccCCccccccchhccccccccc-CchhhhhhccccCHH
Confidence 11233333 344578888876665 888888877665543
No 51
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=54.81 E-value=76 Score=24.94 Aligned_cols=75 Identities=11% Similarity=-0.091 Sum_probs=54.3
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhhh
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQ 501 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmNQ 501 (564)
.+-..|+..|..+|..+|-++.-.+..-. +-....+-.-.+.+|+.++..+|.........+..-|..+..+...
T Consensus 57 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~--~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 57 QQPEQALADCRRALELDGQSVKAHFFLGQ--CQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCchhHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568999999999998877654333333 3334556667899999999999987766777777777777766544
No 52
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=54.65 E-value=69 Score=24.96 Aligned_cols=49 Identities=10% Similarity=0.006 Sum_probs=26.9
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 430 AMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 430 Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
|++.|..+|..+|-++.-.+..-.-|. ..++-.-.+.+|+.++..+|.-
T Consensus 4 a~~~~~~al~~~p~~~~~~~~lg~~~~--~~g~~~~A~~~~~~al~~~p~~ 52 (115)
T 2kat_A 4 ITERLEAMLAQGTDNMLLRFTLGKTYA--EHEQFDAALPHLRAALDFDPTY 52 (115)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHH--HccCHHHHHHHHHHHHHHCCCc
Confidence 566677777766655543322222222 2334444667777777777653
No 53
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=54.18 E-value=87 Score=25.70 Aligned_cols=51 Identities=14% Similarity=0.083 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 428 KDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 428 R~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
..|++.|..||..+|-++.-.... ..+-...++-.-.|..|+.++..||.-
T Consensus 30 ~~A~~~~~~al~~~p~~~~~~~~~--~~~~~~~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 30 PTAMRHYNEAVKRDPENAILYSNR--AACLTKLMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHH--hhHHHhhccHHHHHHHHHHHHHhhhhh
Confidence 567777777777777665433322 222233455555677777777777763
No 54
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=53.92 E-value=1.1e+02 Score=26.38 Aligned_cols=116 Identities=12% Similarity=0.095 Sum_probs=71.6
Q ss_pred hhhhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHH
Q psy5197 359 KVMKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARIN-QHKKDAMNCYIEA 437 (564)
Q Consensus 359 ~VmKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LN-drRR~Ale~Yl~A 437 (564)
.-+.+|.+|..-++..-+.+|.+. --.-...++..++.+++-.... ......+.......+. .+-..|++.|..+
T Consensus 90 ~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 165 (258)
T 3uq3_A 90 HKLGDLKKTIEYYQKSLTEHRTAD---ILTKLRNAEKELKKAEAEAYVN-PEKAEEARLEGKEYFTKSDWPNAVKAYTEM 165 (258)
T ss_dssp HHTTCHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHhcCchhH---HHHHHhHHHHHHHHHHHHHHcC-cchHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 346778888887777766666643 1222345666666665543322 2233344444444333 3456899999999
Q ss_pred HccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 438 LNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 438 Lq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
+..+|.++.-....-.-| ...++-.-.+.+|+-++..+|..
T Consensus 166 ~~~~~~~~~~~~~l~~~~--~~~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 166 IKRAPEDARGYSNRAAAL--AKLMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp HHHCTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCcccHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHhCHHH
Confidence 999988775443333333 34566667899999999988874
No 55
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=52.19 E-value=2e+02 Score=29.13 Aligned_cols=18 Identities=17% Similarity=0.001 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHccCCCCh
Q psy5197 428 KDAMNCYIEALNDVSLNT 445 (564)
Q Consensus 428 R~Ale~Yl~ALq~~pP~p 445 (564)
..|++.|..||+.+|-++
T Consensus 196 ~~A~~~~~~al~~~p~~~ 213 (474)
T 4abn_A 196 MDSVRQAKLAVQMDVLDG 213 (474)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 355666666665555444
No 56
>2ody_E Boophilin; kunitz-type thrombin inhibitor, blood clotting-blood clottin inhibitor complex; HET: NAG; 2.35A {Rhipicephalus microplus}
Probab=52.11 E-value=3.5 Score=36.62 Aligned_cols=34 Identities=26% Similarity=0.297 Sum_probs=27.1
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYK 282 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~ 282 (564)
++||+++...+.|..|+|+ |+.+ +.|+|.+..-|
T Consensus 87 ~~r~~yd~~~~~C~~F~Y~-GC~G---------------N~N~F~t~~eC 120 (127)
T 2ody_E 87 LERWFYNVQSGECETFVYG-GCGG---------------NDNNYESEEEC 120 (127)
T ss_dssp EEEEEEETTTTEEEEEEEC-SSCC---------------CSCCBSSHHHH
T ss_pred ceeEEECCCCCceeEEEEC-CcCC---------------CCcCcCCHHHH
Confidence 6899999999999999995 7764 56777765444
No 57
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=51.35 E-value=90 Score=31.76 Aligned_cols=83 Identities=12% Similarity=0.093 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHhhh-hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHH
Q psy5197 411 LIVMHQQRVAARINQ-HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTL 489 (564)
Q Consensus 411 LvetH~aRVeA~LNd-rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvl 489 (564)
+...+..+-.+.+.. +-..|++.|..||.-+|-++.-.+..=+-|.+ ..+-.-.+..|+.++..+|.-+ .++
T Consensus 316 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~--~g~~~~A~~~~~~al~l~P~~~-----~a~ 388 (457)
T 1kt0_A 316 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLL--MNEFESAKGDFEKVLEVNPQNK-----AAR 388 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHTTC---------CHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH--ccCHHHHHHHHHHHHHhCCCCH-----HHH
Confidence 345555555554443 34589999999999998887655444444433 4455558999999999999754 344
Q ss_pred HHHHHHHHHhh
Q psy5197 490 EHLVDIDHTIN 500 (564)
Q Consensus 490 tHL~vIeeRmN 500 (564)
..|..|..+++
T Consensus 389 ~~l~~~~~~~~ 399 (457)
T 1kt0_A 389 LQISMCQKKAK 399 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555544444
No 58
>1bik_A Bikunin; glycoprotein, trypstatin, urinary trypsin inhibitor acid-rich protein, serine protease inhibitor (kunitz type), glycosylated protein; HET: NAG; 2.50A {Homo sapiens} SCOP: g.8.1.1 g.8.1.1
Probab=50.89 E-value=3.7 Score=37.52 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=32.2
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
++||+++...++|..|+| +||.+ +.|+|.+..-|...+.
T Consensus 95 ~~r~yyd~~~~~C~~F~Y-gGC~G---------------N~NnF~t~~eC~~~C~ 133 (147)
T 1bik_A 95 IQLWAFDAVKGKCVLFPY-GGCQG---------------NGNKFYSEKECREYCG 133 (147)
T ss_dssp EEEEEEETTTTEEEEEEE-CSSSC---------------CSCCBSSHHHHHHHHC
T ss_pred ceEEEecccCCcceEEEE-CCccC---------------CccCcCCHHHHHHHCc
Confidence 689999999999999999 67764 5788888777766554
No 59
>2ody_E Boophilin; kunitz-type thrombin inhibitor, blood clotting-blood clottin inhibitor complex; HET: NAG; 2.35A {Rhipicephalus microplus}
Probab=50.24 E-value=3.9 Score=36.30 Aligned_cols=40 Identities=18% Similarity=0.185 Sum_probs=31.9
Q ss_pred HhhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 232 VLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 232 ~~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
.+.||+++.-.++|..|+| +||.+ +.|+|.+..-+...+.
T Consensus 18 ~~~r~~yn~~t~~C~~F~y-~GC~g---------------N~N~F~t~~~C~~~C~ 57 (127)
T 2ody_E 18 LIPRFYFNTETGKCTMFSY-GGCGG---------------NENNFETIEECQKACG 57 (127)
T ss_dssp CEEEEEEETTTTEEEEEEE-CSSCC---------------CSSCBSSHHHHHHHHS
T ss_pred ceeeEEEECCCCeeeEeec-CCcCC---------------CccccCcHHHHHHhcc
Confidence 3789999999999999999 57764 5688888777666555
No 60
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=49.68 E-value=96 Score=31.55 Aligned_cols=105 Identities=7% Similarity=0.018 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHccCCCChh-------------HHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy5197 407 EKHQLIVMHQQRVAARINQ-HKKDAMNCYIEALNDVSLNTH-------------KVQKCLQKLLRALHKDRHHTIAHYKH 472 (564)
Q Consensus 407 ErqqLvetH~aRVeA~LNd-rRR~Ale~Yl~ALq~~pP~ph-------------rVl~aLkrYvRAe~KDR~HTirHYqH 472 (564)
++-.....+..+-.+.++. +-..|+..|..||+-+|-.+. -.+......+....++-.-.|.+|+.
T Consensus 263 ~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3444455555555555543 445999999999998877641 01111123334456667778999999
Q ss_pred HhhcChh--HHhhcchhHHHHHHHHHHHhhhhhhhhhhchh
Q psy5197 473 LLATNLD--FAVKEKPMTLEHLVDIDHTINQSMTMLQRHPA 511 (564)
Q Consensus 473 v~avdPe--kAaqmk~qvltHL~vIeeRmNQSLsLLyr~P~ 511 (564)
++..+|. +|--.+-.++-+|...++-+..--..|.-.|.
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~ 383 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ 383 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 9999997 45555566666666666554433333444443
No 61
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=48.25 E-value=2.2e+02 Score=28.28 Aligned_cols=69 Identities=16% Similarity=0.068 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHhhhh-hHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 410 QLIVMHQQRVAARINQH-KKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 410 qLvetH~aRVeA~LNdr-RR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.....+..+-.+.+... -..|++.|..||..+|-++.-.+..=.-|. ..++-.-.+.+|+.++..+|..
T Consensus 271 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~--~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQ--GLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH--HccCHHHHHHHHHHHHHhCCCC
Confidence 34455555555555433 368999999999999877654443333333 3445555789999999998863
No 62
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=48.01 E-value=1.1e+02 Score=24.61 Aligned_cols=55 Identities=5% Similarity=-0.089 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA 481 (564)
.+-..|++.|..++..+|.++.-.+..-. +-...++-.-.+.+|+.++..+|...
T Consensus 61 ~~~~~A~~~~~~a~~~~~~~~~~~~~~a~--~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 61 ECYGYALGDATRAIELDKKYIKGYYRRAA--SNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred CCHHHHHHHHHHHHHhCcccHHHHHHHHH--HHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 34568999999999998877654333222 23334555668899999999988744
No 63
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=47.92 E-value=98 Score=26.05 Aligned_cols=54 Identities=7% Similarity=-0.138 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.+-..|++.|..||.-+|-++.-.+..=.-|. ...+-.-.+.+|+.++..+|..
T Consensus 69 g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~--~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 69 GQYDLAIHSYSYGAVMDIXEPRFPFHAAECLL--QXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHhcCCCCchHHHHHHHHHH--HcCCHHHHHHHHHHHHHHCcCC
Confidence 34568999999999998888765554433343 4455566789999999887753
No 64
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=47.85 E-value=1e+02 Score=24.27 Aligned_cols=72 Identities=4% Similarity=-0.083 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhh-cchhHHHHHHHHHHHh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVK-EKPMTLEHLVDIDHTI 499 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaq-mk~qvltHL~vIeeRm 499 (564)
+-..|++.|..||..+|-++.-.+..=. +-...++-.-.+.+|+.++..+|..... --..++..|..+.++|
T Consensus 53 ~~~~A~~~~~~al~~~p~~~~~~~~lg~--~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 53 SFPEAIADCNKAIEKDPNFVRAYIRKAT--AQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 4468999999999999877654433322 3334555666789999999988543321 1234555555555544
No 65
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=47.34 E-value=1e+02 Score=28.34 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHccCCCChhHHHHHHHHHHHHH---------hhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHH
Q psy5197 427 KKDAMNCYIEALNDVSLNTHKVQKCLQKLLRAL---------HKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDH 497 (564)
Q Consensus 427 RR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe---------~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIee 497 (564)
-..|+..|..||.-+|-.+.-....=-.|..-- ..+-.-.|..|+-++..||.-.
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~---------------- 125 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT---------------- 125 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH----------------
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH----------------
Confidence 467999999999999887754433333333221 1345557889999999999742
Q ss_pred HhhhhhhhhhhchhhHHHhHHH
Q psy5197 498 TINQSMTMLQRHPALAVKISEL 519 (564)
Q Consensus 498 RmNQSLsLLyr~P~la~eI~~~ 519 (564)
--..+|.+..+.|.+--+|+++
T Consensus 126 ~y~~al~~~~ka~el~~~~~~~ 147 (158)
T 1zu2_A 126 HYLKSLEMTAKAPQLHAEAYKQ 147 (158)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCHhccCccccc
Confidence 3356788888888888877765
No 66
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=47.31 E-value=1.2e+02 Score=24.86 Aligned_cols=89 Identities=11% Similarity=-0.023 Sum_probs=57.7
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHcc
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALND 440 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LNdrRR~Ale~Yl~ALq~ 440 (564)
+.+|.+|...++.+-..+|...... ..++.+... ..+-..|+..|..||..
T Consensus 31 ~g~~~~A~~~~~~al~~~p~~~~~~----------------------------~~lg~~~~~-~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 31 AGKWDDAQKIFQALCMLDHYDARYF----------------------------LGLGACRQS-LGLYEQALQSYSYGALM 81 (142)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHH----------------------------HHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HccHHHHHHHHHHHHHhCCccHHHH----------------------------HHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 4678888888877766666543111 112222222 23456899999999999
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 441 VSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 441 ~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
+|-++.-.+..-.-|. ...+-.-.+.+|+.++..+|..
T Consensus 82 ~p~~~~~~~~lg~~~~--~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 82 DINEPRFPFHAAECHL--QLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp CTTCTHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcHHHHHHHHHHH--HcCCHHHHHHHHHHHHHhCCCC
Confidence 9888765544433333 3455566888999999888854
No 67
>1bik_A Bikunin; glycoprotein, trypstatin, urinary trypsin inhibitor acid-rich protein, serine protease inhibitor (kunitz type), glycosylated protein; HET: NAG; 2.50A {Homo sapiens} SCOP: g.8.1.1 g.8.1.1
Probab=46.63 E-value=4.8 Score=36.81 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=32.2
Q ss_pred HhhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCccccccc
Q psy5197 232 VLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIK 287 (564)
Q Consensus 232 ~~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~k 287 (564)
.+.||+++.-..+|..|+| +||.+ +.|+|.+..-|...+.
T Consensus 38 ~~~r~~yn~~t~~C~~F~Y-gGC~G---------------N~NnF~t~~eC~~~C~ 77 (147)
T 1bik_A 38 MTSRYFYNGTSMACETFQY-GGCMG---------------NGNNFVTEKECLQTCR 77 (147)
T ss_dssp CEEEEEEETTTTEEEEEEE-CSSSC---------------CSCCBSSHHHHHHHHC
T ss_pred CeeEEEEECCCCeeEEeEc-CCccC---------------CCCccccccccccccC
Confidence 3789999999999999999 57765 5688888777766555
No 68
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=46.49 E-value=1.9e+02 Score=27.28 Aligned_cols=22 Identities=5% Similarity=0.122 Sum_probs=13.8
Q ss_pred hhhchHHHHHHHhhcccCCCCc
Q psy5197 360 VMKDWSDLEERYQDMRSKSPGV 381 (564)
Q Consensus 360 VmKEW~eAe~q~knL~~adPka 381 (564)
-|..+.+|...++.+-+.+|..
T Consensus 142 ~~g~~~~A~~~l~~~~~~~p~~ 163 (291)
T 3mkr_A 142 KLDRLDLARKELKKMQDQDEDA 163 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HCCCHHHHHHHHHHHHhhCcCc
Confidence 3566777777776666555553
No 69
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=46.38 E-value=1.5e+02 Score=25.79 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=8.2
Q ss_pred hhhhHHHHHHHHhhcChh
Q psy5197 462 DRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 462 DR~HTirHYqHv~avdPe 479 (564)
+-.-.+.+|+.++..+|.
T Consensus 91 ~~~~A~~~~~~al~~~p~ 108 (228)
T 4i17_A 91 NNQEYIATLTEGIKAVPG 108 (228)
T ss_dssp CHHHHHHHHHHHHHHSTT
T ss_pred cHHHHHHHHHHHHHHCCC
Confidence 333344445554444443
No 70
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=45.44 E-value=1.4e+02 Score=27.82 Aligned_cols=50 Identities=6% Similarity=-0.032 Sum_probs=27.4
Q ss_pred HHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 429 DAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 429 ~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.|++.|..||..+|-++.-.+..-.-|+ .+.+..-.+.+|+-++..+|.-
T Consensus 203 ~a~~~l~~al~~~P~~~~~~~~la~~l~--~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 203 PEIQQLQQQVAENPEDAALATQLALQLH--QVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHCTTG
T ss_pred ccHHHHHHHHhcCCccHHHHHHHHHHHH--HcccHHHHHHHHHHHHhccccc
Confidence 4666666666666666554333333332 2334445666666666666643
No 71
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=45.37 E-value=1.7e+02 Score=31.58 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
+-..|++.|..||+.+|-++.-.+..=.-|.+ .++-.- +.+|+.++..||.-
T Consensus 482 ~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~--~g~~~~-~~~~~~al~~~P~~ 533 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPGELAPKLALAATAEL--AGNTDE-HKFYQTVWSTNDGV 533 (681)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH--HTCCCT-TCHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH--cCChHH-HHHHHHHHHhCCch
Confidence 34588888888888887665443322222222 233333 77777777777764
No 72
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=44.42 E-value=1.8e+02 Score=26.23 Aligned_cols=21 Identities=5% Similarity=-0.094 Sum_probs=11.7
Q ss_pred hhchHHHHHHHhhcccCCCCc
Q psy5197 361 MKDWSDLEERYQDMRSKSPGV 381 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPka 381 (564)
+.+|++|..-++..-+.+|..
T Consensus 201 ~~~~~~A~~~~~~a~~~~~~~ 221 (359)
T 3ieg_A 201 LGDHELSLSEVRECLKLDQDH 221 (359)
T ss_dssp HTCHHHHHHHHHHHHHHCTTC
T ss_pred cCCHHHHHHHHHHHHhhCccc
Confidence 456666666555554445543
No 73
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=43.37 E-value=59 Score=27.62 Aligned_cols=84 Identities=11% Similarity=0.035 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh--HHhhcchhHHHHHHHHHHHhhhhhh
Q psy5197 427 KKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD--FAVKEKPMTLEHLVDIDHTINQSMT 504 (564)
Q Consensus 427 RR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe--kAaqmk~qvltHL~vIeeRmNQSLs 504 (564)
-..|+..|..++..+| ++. +...+-.+....+.+..-.+.+|+.++..+|. .+--..-.++..+...++-+..-..
T Consensus 56 ~~~A~~~~~~a~~~~p-~~~-~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~ 133 (176)
T 2r5s_A 56 FELAQELLATIPLEYQ-DNS-YKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWN 133 (176)
T ss_dssp HHHHHHHHTTCCGGGC-CHH-HHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccC-ChH-HHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4567777777777776 542 22222111111222222247777777777776 3334444555555555555555555
Q ss_pred hhhhchhh
Q psy5197 505 MLQRHPAL 512 (564)
Q Consensus 505 LLyr~P~l 512 (564)
+|...|..
T Consensus 134 ~l~~~p~~ 141 (176)
T 2r5s_A 134 ILKVNLGA 141 (176)
T ss_dssp HHTTCTTT
T ss_pred HHHhCccc
Confidence 56666653
No 74
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=43.25 E-value=2.8e+02 Score=28.13 Aligned_cols=159 Identities=8% Similarity=0.034 Sum_probs=85.7
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHH-HH----H---------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhh--
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQ-KM----T---------LRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARIN-- 424 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq-~l----~---------qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LN-- 424 (564)
+.+|++|..-++..-..+|.. ..... +. . .+|.+-++.+++=...... -...+...-.+.+.
T Consensus 150 ~g~~~~A~~~~~~al~~~p~~-~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~ 227 (474)
T 4abn_A 150 KGDVTSAHTCFSGALTHCKNK-VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLY 227 (474)
T ss_dssp HTCHHHHHHHHHHHHTTCCCH-HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCCCH-HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHH
Confidence 478888888888877777763 22111 11 1 3344444444432221111 11222222222222
Q ss_pred -------hhhHHHHHHHHHHHccCC---CChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHH
Q psy5197 425 -------QHKKDAMNCYIEALNDVS---LNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVD 494 (564)
Q Consensus 425 -------drRR~Ale~Yl~ALq~~p---P~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~v 494 (564)
.+-..|++.|..||..+| -++.-.+..-.-| ....+-.-.+.+|+.++..+|.-+ ..+..|..
T Consensus 228 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~--~~~g~~~~A~~~~~~al~l~p~~~-----~a~~~l~~ 300 (474)
T 4abn_A 228 FNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLH--KYEESYGEALEGFSQAAALDPAWP-----EPQQREQQ 300 (474)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHH
T ss_pred HhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHH
Confidence 446789999999999887 4554333332333 335566678999999999999854 33444444
Q ss_pred HHHHhhhhhhhhhhchhhHHHhHHHHHHHHHHhhccC
Q psy5197 495 IDHTINQSMTMLQRHPALAVKISELMQDYMQALRSKD 531 (564)
Q Consensus 495 IeeRmNQSLsLLyr~P~la~eI~~~idellq~~Rs~~ 531 (564)
+...+++--..+.....+.. ..+.+++..++...
T Consensus 301 ~~~~lg~~~eAi~~~~~~~~---~~l~~~~~~l~~~~ 334 (474)
T 4abn_A 301 LLEFLSRLTSLLESKGKTKP---KKLQSMLGSLRPAH 334 (474)
T ss_dssp HHHHHHHHHHHHHHTTTCCH---HHHHHHHHTCCSGG
T ss_pred HHHHHHHHHHHHHHhccccC---ccHHHHHHhchhcc
Confidence 44444444444434444422 33556666666543
No 75
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=43.19 E-value=1.2e+02 Score=30.23 Aligned_cols=73 Identities=12% Similarity=0.077 Sum_probs=41.2
Q ss_pred hhhHHHHHHHHHHHc----------------cCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH--Hhhcch
Q psy5197 425 QHKKDAMNCYIEALN----------------DVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF--AVKEKP 486 (564)
Q Consensus 425 drRR~Ale~Yl~ALq----------------~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek--Aaqmk~ 486 (564)
.+-..|++.|..||. .+|-++. ++.. ...+....++-.-.|.+|+.++..+|.. |--.+-
T Consensus 237 g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~-~~~n-la~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 314 (370)
T 1ihg_A 237 QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALS-CVLN-IGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRA 314 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHH-HHHH-HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHH-HHHH-HHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 344688999998887 2221111 1111 2223334566667899999999999973 333344
Q ss_pred hHHHHHHHHHHHh
Q psy5197 487 MTLEHLVDIDHTI 499 (564)
Q Consensus 487 qvltHL~vIeeRm 499 (564)
.++..|...++-+
T Consensus 315 ~~~~~~g~~~eA~ 327 (370)
T 1ihg_A 315 QGWQGLKEYDQAL 327 (370)
T ss_dssp HHHHHTTCHHHHH
T ss_pred HHHHHccCHHHHH
Confidence 4444444444433
No 76
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=42.04 E-value=2.3e+02 Score=26.72 Aligned_cols=65 Identities=15% Similarity=0.044 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhhh-hHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 413 VMHQQRVAARINQH-KKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 413 etH~aRVeA~LNdr-RR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
..+..+..+.+... -..|++.|..||..+|-.+.-....-.-|.+ .++-.-.+..|+.++..+|.
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~--~g~~~~A~~~~~~al~~~p~ 133 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPD 133 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH--HSCSSHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhCCC
Confidence 34444444444333 3578888888888777665433332222322 22333345555555555554
No 77
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=38.67 E-value=91 Score=22.94 Aligned_cols=53 Identities=6% Similarity=-0.021 Sum_probs=36.8
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
.+-..|+..|..++..+|.++.-.+..-. +-...++-.-.+..|+.++..+|.
T Consensus 20 ~~~~~A~~~~~~a~~~~~~~~~~~~~~a~--~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 20 GNYTESIDLFEKAIQLDPEESKYWLMKGK--ALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCHHHHHHHHHHHHHHCCCCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred hhHHHHHHHHHHHHHhCcCCHHHHHHHHH--HHHHccCHHHHHHHHHHHHHhCcc
Confidence 34568999999999988877653332222 223345555678899999998887
No 78
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=38.53 E-value=2.2e+02 Score=25.48 Aligned_cols=62 Identities=8% Similarity=-0.045 Sum_probs=30.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 416 QQRVAARINQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 416 ~aRVeA~LNdrRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
++++...++.+-..|++.|..+++.+|-.+.-....-.-| ...++-.-.+.+|+.++..+|.
T Consensus 96 l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~--~~~~~~~~A~~~~~~a~~~~~~ 157 (330)
T 3hym_B 96 VGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSF--AVESEHDQAMAAYFTAAQLMKG 157 (330)
T ss_dssp HHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHH--HHHTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHH--HHccCHHHHHHHHHHHHHhccc
Confidence 3333333333445677777777776665554322222222 2233444555666666555554
No 79
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=38.53 E-value=1.2e+02 Score=22.62 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=38.9
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.+-..|++.|..||..+|.++.-.... -.+-...++-.-.+.+|+.++..+|..
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~l--g~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 18 GLYREAVHCYDQLITAQPQNPVGYSNK--AMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHH--HHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 345689999999999998776443322 223334556667899999999999975
No 80
>1toc_R Ornithodorin; vitamin K, zymogen, gamma-carboxyglutamic acid, acute phase, liver, hydrolase, serine protease kunitz-like inhibitor, kringle; 3.10A {Ornithodoros moubata} SCOP: g.8.1.2 g.8.1.2
Probab=38.26 E-value=4.2 Score=35.93 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=28.8
Q ss_pred hhhhccCCCCCcccccccccccccccCCCChhhhhhhhccccCCCCCCcccccc
Q psy5197 233 LKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEI 286 (564)
Q Consensus 233 ~~r~~~~~p~~~~~~~~y~~G~~~~dq~~t~ee~~~~n~~~n~~Enp~Y~yfe~ 286 (564)
++|||++...++|..|+ +|+.+ |.|+|.+..-+...+
T Consensus 78 ~~rwyyd~~~~~C~~F~--gGC~G---------------N~NnF~t~~eC~~~C 114 (120)
T 1toc_R 78 TDITYYDSDSKTCKVLA--ASCPS---------------GENTFESEVECQVAC 114 (120)
T ss_dssp EEEEEEETTTTEEEEEE--EEBCS---------------SSCCBSSHHHHHHHT
T ss_pred cceEEEECCCCeeeecC--CCcCC---------------CCcCcCCHHHHHHHc
Confidence 68999999999999999 78875 567887755544333
No 81
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=38.21 E-value=1.7e+02 Score=24.17 Aligned_cols=85 Identities=12% Similarity=0.014 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhhhh-hHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHH
Q psy5197 411 LIVMHQQRVAARINQH-KKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTL 489 (564)
Q Consensus 411 LvetH~aRVeA~LNdr-RR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvl 489 (564)
....|..+-.+.+.-. -..|+..|..||.-+|-++.-.+..=.-| ....+-.-.+..|+.++..+|.-.. .+.
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~--~~~g~~~~A~~~~~~al~l~p~~~~----~~~ 135 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKAR--IAAWKLDEAEEDLKLLLRNHPAAAS----VVA 135 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHCGGGHH----HHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHH--HHHhcHHHHHHHHHHHHhcCCCCHH----HHH
Confidence 3445555555555443 36899999999999988876544433333 3455666789999999999998553 344
Q ss_pred HHHHHHHHHhhh
Q psy5197 490 EHLVDIDHTINQ 501 (564)
Q Consensus 490 tHL~vIeeRmNQ 501 (564)
..|..|..++.+
T Consensus 136 ~~l~~~~~~~~~ 147 (162)
T 3rkv_A 136 REMKIVTERRAE 147 (162)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 455555555544
No 82
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=36.89 E-value=86 Score=26.43 Aligned_cols=93 Identities=13% Similarity=0.243 Sum_probs=62.5
Q ss_pred HHHHHHHHHccCCCChhHHHHHHHHHHH---HHhhhhhhHHHHHH-HHhhcChhHHhhcchhHHHHHHHHHHHhhhhhhh
Q psy5197 430 AMNCYIEALNDVSLNTHKVQKCLQKLLR---ALHKDRHHTIAHYK-HLLATNLDFAVKEKPMTLEHLVDIDHTINQSMTM 505 (564)
Q Consensus 430 Ale~Yl~ALq~~pP~phrVl~aLkrYvR---Ae~KDR~HTirHYq-Hv~avdPekAaqmk~qvltHL~vIeeRmNQSLsL 505 (564)
-|+.|+..+..=|.--.|.|..||..=. ...+.-..-+..|- .....+|+. | ..+|..|.+-++.++.+
T Consensus 5 yledyld~ie~LP~El~r~~~~irelD~~~~~~~~~i~~~~~~~~~~~~~~~~~~----r---~~~l~~I~~~~~~~~~l 77 (104)
T 4afl_A 5 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE----K---LALLKQIQEAYGKCKEF 77 (104)
T ss_dssp HHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCCHHH----H---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCChhh----h---HHHHHHHHHHHHHHHHH
Confidence 4789999999999999999888875411 11111111222221 111222321 1 25678999999999999
Q ss_pred hhhchhhHHHhHHHHHHHHHHhhc
Q psy5197 506 LQRHPALAVKISELMQDYMQALRS 529 (564)
Q Consensus 506 Lyr~P~la~eI~~~idellq~~Rs 529 (564)
..-==.|+....+.|+..+..+.+
T Consensus 78 ~dEKv~lA~~~~dlvdkhirrLD~ 101 (104)
T 4afl_A 78 GDDKVQLAMQTYEMVDKHIRRLDT 101 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 988889999999999999887764
No 83
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=36.79 E-value=2.1e+02 Score=27.61 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH--Hhhc
Q psy5197 408 KHQLIVMHQQRVAARINQ-HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF--AVKE 484 (564)
Q Consensus 408 rqqLvetH~aRVeA~LNd-rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek--Aaqm 484 (564)
|...++.+..+-.+.+.. +-..|+..|..+|..+| ++.-.+..-.-|+ ...+-.-.+..|+.++..+|.- |-..
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~--~~g~~~~A~~~~~~al~~~p~~~~~~~~ 78 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYV--SVGDLKKVVEMSTKALELKPDYSKVLLR 78 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHH--HHhhHHHHHHHHHHHhccChHHHHHHHH
Confidence 444555555555555543 34578888888888774 5443333333333 3445556778888888887763 3334
Q ss_pred chhHHHHHHHHHHHhhhhhhhhhhch
Q psy5197 485 KPMTLEHLVDIDHTINQSMTMLQRHP 510 (564)
Q Consensus 485 k~qvltHL~vIeeRmNQSLsLLyr~P 510 (564)
.-.++.++...++-+.---.+|...|
T Consensus 79 l~~~~~~~g~~~~A~~~~~~~~~~~~ 104 (514)
T 2gw1_A 79 RASANEGLGKFADAMFDLSVLSLNGD 104 (514)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 44444444444444433333333444
No 84
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=36.59 E-value=2e+02 Score=24.58 Aligned_cols=91 Identities=15% Similarity=0.049 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHccCCCChh---------------HHHHHHHHHHHHHhhhhhhHHHHH
Q psy5197 407 EKHQLIVMHQQRVAARIN-QHKKDAMNCYIEALNDVSLNTH---------------KVQKCLQKLLRALHKDRHHTIAHY 470 (564)
Q Consensus 407 ErqqLvetH~aRVeA~LN-drRR~Ale~Yl~ALq~~pP~ph---------------rVl~aLkrYvRAe~KDR~HTirHY 470 (564)
++-..+..+...-...+. .+-..|++.|..||...|-.+. .++. ....+-...++-.-.+.+|
T Consensus 33 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~-~la~~~~~~~~~~~A~~~~ 111 (198)
T 2fbn_A 33 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNL-NLATCYNKNKDYPKAIDHA 111 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHH-HHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHH
Confidence 333444444444444443 3446899999999997766651 2222 1222333456677789999
Q ss_pred HHHhhcChhH--HhhcchhHHHHHHHHHHH
Q psy5197 471 KHLLATNLDF--AVKEKPMTLEHLVDIDHT 498 (564)
Q Consensus 471 qHv~avdPek--Aaqmk~qvltHL~vIeeR 498 (564)
+.++..+|.. |--..-.++..+...++-
T Consensus 112 ~~al~~~p~~~~~~~~lg~~~~~~~~~~~A 141 (198)
T 2fbn_A 112 SKVLKIDKNNVKALYKLGVANMYFGFLEEA 141 (198)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHcccHHHH
Confidence 9999999863 334444455555555443
No 85
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=36.55 E-value=2.1e+02 Score=26.01 Aligned_cols=41 Identities=5% Similarity=0.001 Sum_probs=31.6
Q ss_pred HHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhhhhhhhhhhc
Q psy5197 458 ALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMTMLQRH 509 (564)
Q Consensus 458 Ae~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmNQSLsLLyr~ 509 (564)
.+=.|=.+.|++|---+..||+ .|..|++|+++--+|-+||
T Consensus 101 ~~l~d~~~~L~~y~~~le~DP~-----------rL~~ie~RL~~l~~L~RKy 141 (175)
T 4abx_A 101 ESVQAIAGELRDVAEGSAADPE-----------ALDRVEARLSALSKLKNKY 141 (175)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHH-----------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHH-----------HHHHHHHHHHHHHHHHHHc
Confidence 4456667788888888888884 4788899998887777776
No 86
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=35.78 E-value=3e+02 Score=26.42 Aligned_cols=53 Identities=15% Similarity=0.028 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
+-..|++.|..||.-+|-++.-.+..-.-| ....+-.-.+..|+.++..+|.-
T Consensus 211 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~--~~~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 211 AFSAAIESCNKALELDSNNEKGLSRRGEAH--LAVNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHCCCC
Confidence 345788888888888877765444333333 33444555688888888888864
No 87
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=34.27 E-value=1.5e+02 Score=28.65 Aligned_cols=57 Identities=11% Similarity=0.035 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHHHccCCCChhH--HHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHK--VQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAV 482 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phr--Vl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAa 482 (564)
+-..|++.|..||..+|+.... +...+-.+.....|+---.|.+|+-++..+|.-..
T Consensus 349 ~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~ 407 (472)
T 4g1t_A 349 QYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSRE 407 (472)
T ss_dssp CHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHH
T ss_pred cHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHH
Confidence 3468999999999987655432 33333333444456656689999999998887443
No 88
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=33.49 E-value=98 Score=28.98 Aligned_cols=99 Identities=8% Similarity=-0.015 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHH
Q psy5197 392 RFQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQ-HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHY 470 (564)
Q Consensus 392 hFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LNd-rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHY 470 (564)
+|.+-+..+++=....-. -...+..+-.+.+.. +-..|+..|..||+.+|-++.-.... ..+-...++---.+.+|
T Consensus 19 ~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l--g~~~~~~g~~~~A~~~~ 95 (281)
T 2c2l_A 19 KYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFL--GQCQLEMESYDEAIANL 95 (281)
T ss_dssp CHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHH--HHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHH--HHHHHHcCCHHHHHHHH
Confidence 345555555543332221 223333343333332 34588899999998887766443332 23333455566678899
Q ss_pred HHHhhcChhHHhhcchhHHHHHH
Q psy5197 471 KHLLATNLDFAVKEKPMTLEHLV 493 (564)
Q Consensus 471 qHv~avdPekAaqmk~qvltHL~ 493 (564)
+.++..+|+....+...+...|+
T Consensus 96 ~~al~l~p~~~~~~~~~~~~~~~ 118 (281)
T 2c2l_A 96 QRAYSLAKEQRLNFGDDIPSALR 118 (281)
T ss_dssp HHHHHHHHHTTCCCCSHHHHHHH
T ss_pred HHHHHhCccchhhHHHHHHHHHH
Confidence 99999999776555555544443
No 89
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=33.25 E-value=5.9e+02 Score=29.00 Aligned_cols=149 Identities=14% Similarity=0.201 Sum_probs=66.0
Q ss_pred HHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH---HHHHHHHHhhhhhHHHHHHHHHHHccCCCChh
Q psy5197 370 RYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVM---HQQRVAARINQHKKDAMNCYIEALNDVSLNTH 446 (564)
Q Consensus 370 q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvet---H~aRVeA~LNdrRR~Ale~Yl~ALq~~pP~ph 446 (564)
+++.-+..+|...-.+==.|++.|...+.++=+ +--.++-.. --+|+-.++|+ .|-.+|..-+|.-.
T Consensus 333 ~~~~~~~~~~~~~~~~ll~~~~~f~~~~~~~i~---G~~~~~~~~el~ggari~~if~~-------~f~~~~~~~~~~~~ 402 (772)
T 3zvr_A 333 EYKNFRPDDPARKTKALLQMVQQFAVDFEKRIE---GSGDQIDTYELSGGARINRIFHE-------RFPFELVKMEFDEK 402 (772)
T ss_dssp HHHHHCCCSSSCSHHHHHHHHHHHHHHHHHHHT---C---------CCHHHHHHHHHHT-------HHHHHHHTTSCCHH
T ss_pred HhCCCCCCChHHHHHHHHHHHHHHHHHHHHHhC---CCCCCcCcccCCCCeeeehhHHH-------HhHHHHhcCCCchh
Confidence 344444456554322223355666665554422 222221111 23677777777 34445555555544
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHH----HHHHHhhhhhhhhhhchhhHHHhHHHHHH
Q psy5197 447 KVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLV----DIDHTINQSMTMLQRHPALAVKISELMQD 522 (564)
Q Consensus 447 rVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~----vIeeRmNQSLsLLyr~P~la~eI~~~ide 522 (564)
--.+-++..+|.-.-.|-+.+....-.-+.=-+.-.+++.=.+.|+. .+..-+++...-|.|+|.|..+|...+.+
T Consensus 403 ~~~~~I~~~i~n~~G~~~~lf~p~~~fe~LVk~QI~rl~ePsl~CVdlV~~eL~~iv~~~~~~l~RfP~Lr~ei~~iv~~ 482 (772)
T 3zvr_A 403 ELRREISYAIKNIHDIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTSTIRKCSEKLQQYPRLREEMERIVTT 482 (772)
T ss_dssp HHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHGGGGTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 33344444444433333333211110000000011122222222222 22233456677899999999999999988
Q ss_pred HHHHhh
Q psy5197 523 YMQALR 528 (564)
Q Consensus 523 llq~~R 528 (564)
+|++.+
T Consensus 483 ~Lre~~ 488 (772)
T 3zvr_A 483 HIRERE 488 (772)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887533
No 90
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=33.23 E-value=2.7e+02 Score=25.88 Aligned_cols=99 Identities=9% Similarity=0.026 Sum_probs=64.0
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH--HhhcchhHHHHHHHHHHHhhhh
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF--AVKEKPMTLEHLVDIDHTINQS 502 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek--Aaqmk~qvltHL~vIeeRmNQS 502 (564)
.+-..|+..|..++..+|-.....+.+. ...+.+.+..-.+..|+..++.+|.. |.-..-.++..+...++-+..-
T Consensus 165 g~~~~A~~~l~~~~~~~p~~~~~~~~~~--~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l 242 (287)
T 3qou_A 165 NRSEDAEAVLXTIPLQDQDTRYQGLVAQ--IELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELL 242 (287)
T ss_dssp TCHHHHHHHHTTSCGGGCSHHHHHHHHH--HHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHhCchhhcchHHHHHHHH--HHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHH
Confidence 3456889999988888874333333333 33334444455799999999999983 4445556666667778888888
Q ss_pred hhhhhhchhhH-HHhHHHHHHHHH
Q psy5197 503 MTMLQRHPALA-VKISELMQDYMQ 525 (564)
Q Consensus 503 LsLLyr~P~la-~eI~~~idellq 525 (564)
..+|...|... ...+..+-.++.
T Consensus 243 ~~~l~~~p~~~~~~a~~~l~~~~~ 266 (287)
T 3qou_A 243 FGHLRXDLTAADGQTRXTFQEILA 266 (287)
T ss_dssp HHHHHHCTTGGGGHHHHHHHHHHH
T ss_pred HHHHhcccccccchHHHHHHHHHH
Confidence 88888888763 233343334444
No 91
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=33.12 E-value=1.7e+02 Score=22.60 Aligned_cols=55 Identities=9% Similarity=0.009 Sum_probs=34.6
Q ss_pred hhhHHHHHHHHHHHccCCCChh--HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTH--KVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~ph--rVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.+-..|++.|..++...|-.+. .++- ..-.+....++=.-.+..|+.++..+|..
T Consensus 16 ~~~~~A~~~~~~~~~~~p~~~~~~~~~~-~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 16 GKYDDASQLFLSFLELYPNGVYTPNALY-WLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp TCHHHHHHHHHHHHHHCSSSTTHHHHHH-HHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred CCHHHHHHHHHHHHHHCCCCcccHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 3446788888888887766653 2211 12233344566667788888888877753
No 92
>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}
Probab=32.71 E-value=31 Score=29.95 Aligned_cols=20 Identities=45% Similarity=0.483 Sum_probs=18.2
Q ss_pred HHHHHHHHhhhhHHHHHHHH
Q psy5197 395 QTVQSLEEEGNAEKHQLIVM 414 (564)
Q Consensus 395 ~~V~sLEeE~a~ErqqLvet 414 (564)
.+|+.||.+.+.||++|-.+
T Consensus 53 qvVq~LE~QL~kEreRLqAM 72 (93)
T 4i1l_A 53 EVVQSLEQQLELEKEKLGAM 72 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999998765
No 93
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=32.43 E-value=2.1e+02 Score=23.60 Aligned_cols=67 Identities=9% Similarity=0.050 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhh-hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 412 IVMHQQRVAARIN-QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 412 vetH~aRVeA~LN-drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
.+.+..+-...+. .+-..|++.|..||..+|-++.-....-. +-...++-.-.|.+|+.++..+|.-
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~--~~~~~g~~~~A~~~~~~al~~~p~~ 78 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAA--AYSASGQHEKAAEDAELATVVDPKY 78 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHH--HHHHccCHHHHHHHHHHHHHhCCCC
Confidence 3444444444333 34468899999999888776643333323 3333555566788899988888873
No 94
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=32.40 E-value=3.5e+02 Score=26.03 Aligned_cols=21 Identities=14% Similarity=-0.059 Sum_probs=15.6
Q ss_pred hhHHHHHHHHHHHccCCCChh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTH 446 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~ph 446 (564)
+-..|+..|..||+.+|-++.
T Consensus 245 ~~~~A~~~~~~al~l~P~~~~ 265 (336)
T 1p5q_A 245 DFELARADFQKVLQLYPNNKA 265 (336)
T ss_dssp CHHHHHHHHHHHHHHCSSCHH
T ss_pred CHHHHHHHHHHHHHHCCCCHH
Confidence 345788888888888876653
No 95
>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*
Probab=32.03 E-value=2.8e+02 Score=24.86 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=60.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy5197 394 QQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHL 473 (564)
Q Consensus 394 Q~~V~sLEeE~a~ErqqLvetH~aRVeA~LNdrRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv 473 (564)
+..+++||.+-+..|.+|..- =|.|=..+-+|+++.|-.-..|-.+....-++.--=+.=||+|+-=+
T Consensus 26 ~~~leaie~~fa~~r~~le~e------------mRaan~~La~ai~~~~~~~p~V~aaid~~h~~mG~LQkeTi~HvfeM 93 (118)
T 2y39_A 26 REILELKEDAFAQRRREIETR------------LRAANGKLADAIAKNPAWSPEVEAATQEVERAAGDLQRATLVHVFEM 93 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777766666665421 13344445567777777777888888888888777777899998888
Q ss_pred hh-cChhHHhhcchhHHHHH
Q psy5197 474 LA-TNLDFAVKEKPMTLEHL 492 (564)
Q Consensus 474 ~a-vdPekAaqmk~qvltHL 492 (564)
++ .+|+.+.++-..|..=|
T Consensus 94 R~VLtPeQ~~~fd~~vv~al 113 (118)
T 2y39_A 94 RAGLKPEHRPAYDRVLIDAL 113 (118)
T ss_dssp HHHSCGGGHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHh
Confidence 87 48999988776665443
No 96
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=31.88 E-value=2e+02 Score=23.17 Aligned_cols=90 Identities=10% Similarity=0.074 Sum_probs=54.0
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHcc
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALND 440 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LNdrRR~Ale~Yl~ALq~ 440 (564)
+.+|++|...++..-+.+|.-++.. ..++++... ..+-..|+..|..||..
T Consensus 30 ~g~~~~A~~~~~~al~~~P~~~~a~----------------------------~~lg~~~~~-~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 30 LANLAEAALAFEAVCQKEPEREEAW----------------------------RSLGLTQAE-NEKDGLAIIALNHARML 80 (121)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHH----------------------------HHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCHHHH----------------------------HHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 3688888888887777777654211 112222222 23456899999999999
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH
Q psy5197 441 VSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 441 ~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA 481 (564)
+|-++.-.+..-.-|.+ ..+-.-.+.+|+-++..+|.-+
T Consensus 81 ~P~~~~~~~~la~~~~~--~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 81 DPKDIAVHAALAVSHTN--EHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp CTTCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHC------
T ss_pred CCCCHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhCcCCC
Confidence 98887654444344443 3444457889999999888643
No 97
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=30.64 E-value=2.1e+02 Score=31.51 Aligned_cols=52 Identities=13% Similarity=0.310 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q psy5197 383 EDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCY 434 (564)
Q Consensus 383 e~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LNdrRR~Ale~Y 434 (564)
+...++-...||.-|..|++....||.++...+.--++.-|+++.++.-+.|
T Consensus 514 ~~~~~~~~~~~~e~~~ql~~kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g~ 565 (592)
T 1f5n_A 514 EQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGF 565 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556678999999999999999999998887777777777666555544
No 98
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=30.63 E-value=2.8e+02 Score=24.42 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 427 KKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 427 RR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
-..|+..|..||..+|-++.-.+..=.-|. ...+-.-.+..|+.++..+|.-
T Consensus 21 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~--~~g~~~~A~~~~~~al~~~P~~ 72 (217)
T 2pl2_A 21 YDAALTLFERALKENPQDPEALYWLARTQL--KLGLVNPALENGKTLVARTPRY 72 (217)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHhCCCc
Confidence 346677777777766666554333222222 2344444666666666666653
No 99
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=30.08 E-value=1.6e+02 Score=25.78 Aligned_cols=55 Identities=16% Similarity=0.243 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAV 482 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAa 482 (564)
+-..|+..|..||..+|-++.-.+..=.-| ...++-.-.+..|+.++..||.-+.
T Consensus 69 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~--~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 69 NYDKAYLFYKELLQKAPNNVDCLEACAEMQ--VCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH--HHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 346899999999999987765444333333 3455666789999999999998654
No 100
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=30.04 E-value=2.5e+02 Score=29.80 Aligned_cols=63 Identities=8% Similarity=0.105 Sum_probs=39.7
Q ss_pred HHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhhhhhh
Q psy5197 431 MNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMT 504 (564)
Q Consensus 431 le~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmNQSLs 504 (564)
|.+.|+.|+..--..+...+.|+.++|--+|.+.-.=+-|.++. ..+=.|+.+|.++||--|.
T Consensus 72 L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s-----------~eLe~~i~~lk~~V~~q~~ 134 (390)
T 1deq_A 72 LRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQIN-----------EDLRSRIEILRRKVIEQVQ 134 (390)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHH-----------HHHHHHHHHHHHHHHHHhH
Confidence 55667777766667777888888888877777766666665543 2333444555555554443
No 101
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=29.85 E-value=1.5e+02 Score=24.61 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHccCCCCh
Q psy5197 428 KDAMNCYIEALNDVSLNT 445 (564)
Q Consensus 428 R~Ale~Yl~ALq~~pP~p 445 (564)
..|++.|..|++.+|.++
T Consensus 61 ~~A~~~~~~al~~~p~~~ 78 (177)
T 2e2e_A 61 SNSLLAYRQALQLRGENA 78 (177)
T ss_dssp HHHHHHHHHHHHHHCSCH
T ss_pred HHHHHHHHHHHHcCCCCH
Confidence 345555555555554443
No 102
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=29.80 E-value=2.6e+02 Score=28.55 Aligned_cols=21 Identities=29% Similarity=0.142 Sum_probs=12.3
Q ss_pred hhchHHHHHHHhhcccCCCCc
Q psy5197 361 MKDWSDLEERYQDMRSKSPGV 381 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPka 381 (564)
+++|++|...++..-..+|..
T Consensus 36 ~g~~~~A~~~~~~al~~~p~~ 56 (568)
T 2vsy_A 36 MGDTTAGEMAVQRGLALHPGH 56 (568)
T ss_dssp HTCHHHHHHHHHHHHTTSTTC
T ss_pred cCCHHHHHHHHHHHHHhCCCC
Confidence 456666666666555555544
No 103
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=29.53 E-value=4e+02 Score=25.91 Aligned_cols=147 Identities=11% Similarity=-0.009 Sum_probs=77.2
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhcccCCCCchHHHHHHHH------------HHHHHH
Q psy5197 329 YFTHFEPKDEHHAFKEALQRLEEMHREKVTKVMKDWSDLEERYQDMRSKSPGVAEDFKQKMT------------LRFQQT 396 (564)
Q Consensus 329 Yfe~~~~~~EH~~F~~Ak~~LE~rhr~rm~~VmKEW~eAe~q~knL~~adPkaae~~rq~l~------------qhFQ~~ 396 (564)
|......+.....+..+...+-.........-...|.+|..-++.+-+.+|...+....... ..|..-
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A 262 (537)
T 3fp2_A 183 VNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDA 262 (537)
T ss_dssp SCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHH
Confidence 44444455556667777777766556666666778888888888888888875432111000 011222
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhh
Q psy5197 397 VQSLEEEGNAEKHQLIVMHQQRVAARIN-QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLA 475 (564)
Q Consensus 397 V~sLEeE~a~ErqqLvetH~aRVeA~LN-drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~a 475 (564)
++.+++=...... ...+...-...+. .+-..|++.|..++..+|-.+.-....-.-| ...++-.-.+..|+.++.
T Consensus 263 ~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~A~~~~~~a~~ 338 (537)
T 3fp2_A 263 QVLLQESINLHPT--PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMY--FILQDYKNAKEDFQKAQS 338 (537)
T ss_dssp HHHHHHHHHHCCC--HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC--chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHH--HhcCCHHHHHHHHHHHHH
Confidence 2222222211111 2222222222222 2345788888888888776655332222222 234445556777888877
Q ss_pred cChh
Q psy5197 476 TNLD 479 (564)
Q Consensus 476 vdPe 479 (564)
.+|.
T Consensus 339 ~~~~ 342 (537)
T 3fp2_A 339 LNPE 342 (537)
T ss_dssp HCTT
T ss_pred hCCC
Confidence 7776
No 104
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=28.07 E-value=3.5e+02 Score=24.76 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHHccCCCChh
Q psy5197 427 KKDAMNCYIEALNDVSLNTH 446 (564)
Q Consensus 427 RR~Ale~Yl~ALq~~pP~ph 446 (564)
-..|++.|..++...|..+.
T Consensus 148 ~~~A~~~~~~~~~~~~~~~~ 167 (368)
T 1fch_A 148 QRQACEILRDWLRYTPAYAH 167 (368)
T ss_dssp HHHHHHHHHHHHHTSTTTGG
T ss_pred HHHHHHHHHHHHHhCcCcHH
Confidence 34667777777766655443
No 105
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=27.56 E-value=1.2e+02 Score=30.47 Aligned_cols=117 Identities=9% Similarity=0.074 Sum_probs=71.5
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHH--HH---HH-HHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHhhhhhHHHHHH
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQK--MT---LR-FQQTVQSLEEEGNA-EKHQLIVMHQQRVAARINQHKKDAMNC 433 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~--l~---qh-FQ~~V~sLEeE~a~-ErqqLvetH~aRVeA~LNdrRR~Ale~ 433 (564)
+..+.+|-.-++..-+.+|+-....-.. +. .+ |+.-++.+++=... -+.-.+-.|++.+...+++ -..|+..
T Consensus 110 ~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~-~~eAl~~ 188 (382)
T 2h6f_A 110 DERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRD-PSQELEF 188 (382)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-CTTHHHH
T ss_pred CCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccC-HHHHHHH
Confidence 4678999988888877888765432211 11 11 44444444332222 1222344566666665543 4579999
Q ss_pred HHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 434 YIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 434 Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
|..||.-+|-+++-... +.++-...++-.-.|..|+.++..||.-
T Consensus 189 ~~kal~ldP~~~~a~~~--lg~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 189 IADILNQDAKNYHAWQH--RQWVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHHCTTCHHHHHH--HHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHhCccCHHHHHH--HHHHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 99999998877765432 2333334455567899999999999974
No 106
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=27.36 E-value=55 Score=25.01 Aligned_cols=45 Identities=24% Similarity=0.383 Sum_probs=34.5
Q ss_pred HHHHHHHhhhhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHH
Q psy5197 352 MHREKVTKVMKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEK 408 (564)
Q Consensus 352 rhr~rm~~VmKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~Er 408 (564)
.-|++|.++.|+--.+|+.-+|| . .+|.....-+..||.|+++--
T Consensus 7 ylrkkiarlkkdnlqlerdeqnl----e--------kiianlrdeiarlenevashe 51 (52)
T 3he5_B 7 YLRKKIARLKKDNLQLERDEQNL----E--------KIIANLRDEIARLENEVASHE 51 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----H--------HHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhhhhhhhhhhHhhH----H--------HHHHHHHHHHHHHHHHHhhcc
Confidence 45788999999988899999998 2 367777777888999988743
No 107
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=27.20 E-value=1.2e+02 Score=26.16 Aligned_cols=27 Identities=11% Similarity=0.042 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHH
Q psy5197 412 IVMHQQRVAARINQHKKDAMNCYIEAL 438 (564)
Q Consensus 412 vetH~aRVeA~LNdrRR~Ale~Yl~AL 438 (564)
.+.|..++.++|+.=++..++|||+.-
T Consensus 129 ee~h~~~l~~~l~~i~~~g~~~y~~~~ 155 (161)
T 3uoi_A 129 EEEHIDYLETQLELMDKLGEELYSAQC 155 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 456888999999999999999999753
No 108
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=26.62 E-value=1.9e+02 Score=21.23 Aligned_cols=54 Identities=17% Similarity=0.108 Sum_probs=37.0
Q ss_pred hhhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 424 NQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 424 NdrRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
..+-..|+..|..++..+|.++.-....-.-|. ..++-.-.+..|+.++..+|.
T Consensus 17 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~A~~~~~~~~~~~~~ 70 (118)
T 1elw_A 17 VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYA--KKGDYQKAYEDGCKTVDLKPD 70 (118)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHCTT
T ss_pred cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH--hhccHHHHHHHHHHHHHhCcc
Confidence 445568889999999888777654433333333 355666778888888888875
No 109
>2ike_A Prophenoloxidase activating proteinase-2; beta-sheet, double helix, hydrolase; NMR {Manduca sexta}
Probab=26.49 E-value=18 Score=27.18 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=11.5
Q ss_pred cccccccCccceeeeeccC
Q psy5197 94 MLLPCGISLFAGVEFVCCP 112 (564)
Q Consensus 94 MLLPCGid~F~GVEfVCCP 112 (564)
.-.=|| |.+..+||||
T Consensus 39 ~~s~Cg---~~~~~~VCCp 54 (54)
T 2ike_A 39 KNSVCA---GPEDNSVCCG 54 (54)
T ss_dssp HHTBSS---SSCSSEEEEC
T ss_pred HHccCC---CCCCCeEeCc
Confidence 334688 3667899998
No 110
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=26.30 E-value=1.8e+02 Score=29.84 Aligned_cols=54 Identities=6% Similarity=-0.086 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA 481 (564)
+-..|++.|..||+.+|-.+.-....=.-|. ...+-.-.+.+|+-++..+|..+
T Consensus 55 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~--~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 55 CYGYALGDATRAIELDKKYIKGYYRRAASNM--ALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHSTTCT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHhCCCCH
Confidence 3457888999999888766654333222332 33444557888888888888754
No 111
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=25.97 E-value=3.5e+02 Score=24.03 Aligned_cols=132 Identities=8% Similarity=0.065 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhhcccCCCCc---hHHHH-HHH----HHHHHHHHHHHHHhhhhH--
Q psy5197 338 EHHAFKEALQRLEEMHREKVTKVMKDWSDLEERYQDMRSKSPGV---AEDFK-QKM----TLRFQQTVQSLEEEGNAE-- 407 (564)
Q Consensus 338 EH~~F~~Ak~~LE~rhr~rm~~VmKEW~eAe~q~knL~~adPka---ae~~r-q~l----~qhFQ~~V~sLEeE~a~E-- 407 (564)
-...|..|..-+. .++|.+|...++.+-+.+|.. .+..- -+. ...|..-+..+++=...-
T Consensus 15 ~~~~~~~a~~~~~----------~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~ 84 (261)
T 3qky_A 15 PQEAFERAMEFYN----------QGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQI 84 (261)
T ss_dssp HHHHHHHHHHHHH----------TTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHH----------hCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCC
Confidence 4566777765553 378899998888887777765 32211 111 123344444444333210
Q ss_pred HHHHHHHHHHHHHHHh---------hhhhHHHHHHHHHHHccCCCChh--HHHHHH-------------HHHHHHHhhhh
Q psy5197 408 KHQLIVMHQQRVAARI---------NQHKKDAMNCYIEALNDVSLNTH--KVQKCL-------------QKLLRALHKDR 463 (564)
Q Consensus 408 rqqLvetH~aRVeA~L---------NdrRR~Ale~Yl~ALq~~pP~ph--rVl~aL-------------krYvRAe~KDR 463 (564)
-......+...-.+.+ ..+-..|+..|..+|...|-.+. ..+..| ...+-...++-
T Consensus 85 ~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~ 164 (261)
T 3qky_A 85 DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELY 164 (261)
T ss_dssp CTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred CchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCH
Confidence 0112233333333443 35567899999999998765543 222111 12223345666
Q ss_pred hhHHHHHHHHhhcChh
Q psy5197 464 HHTIAHYKHLLATNLD 479 (564)
Q Consensus 464 ~HTirHYqHv~avdPe 479 (564)
.-.|.+|+.++..+|.
T Consensus 165 ~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 165 EAAAVTYEAVFDAYPD 180 (261)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHCCC
Confidence 6789999999988886
No 112
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=25.94 E-value=1.9e+02 Score=23.60 Aligned_cols=54 Identities=7% Similarity=-0.053 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA 481 (564)
+-..|++.|..||.-+|.++.-.+..=. +-...++-.-.+..|+.++..||.-.
T Consensus 62 ~~~~A~~~~~~al~~~p~~~~a~~~lg~--~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 62 EFQRALDDCDTCIRLDSKFIKGYIRKAA--CLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHhhhhhhHHHHHHHH--HHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 3468999999999999888764433222 33345566668999999999999754
No 113
>2ett_A Sorting nexin-22; PX domain, BC019655, SNX22_human, HS.157607, structural genomics,protein structure initiative PSI; NMR {Homo sapiens}
Probab=25.75 E-value=36 Score=30.00 Aligned_cols=31 Identities=19% Similarity=0.402 Sum_probs=21.7
Q ss_pred hhhhHHHHHHHHHHHccCCCChhHHHHHHHHHHH
Q psy5197 424 NQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLR 457 (564)
Q Consensus 424 NdrRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvR 457 (564)
-+.||.+|+.||..|-..|.-.. .+|+.++.
T Consensus 84 ie~Rr~~Le~yL~~ll~~p~~~s---~~l~~FL~ 114 (128)
T 2ett_A 84 LEQRRQGLEAYIQGILYLNQEVP---KELLEFLR 114 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSSC---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCchhcC---HHHHHhcC
Confidence 35678899999999988765332 56666654
No 114
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=25.58 E-value=3.1e+02 Score=25.60 Aligned_cols=28 Identities=14% Similarity=0.234 Sum_probs=12.8
Q ss_pred HHHHHHHHHhh-hhhHHHHHHHHHHHccCC
Q psy5197 414 MHQQRVAARIN-QHKKDAMNCYIEALNDVS 442 (564)
Q Consensus 414 tH~aRVeA~LN-drRR~Ale~Yl~ALq~~p 442 (564)
.++..+...+. .+-..|+..|..+| .+|
T Consensus 197 ~~~~~g~~~~~~g~~~~A~~~~~~al-~~p 225 (307)
T 2ifu_A 197 KCIAQVLVQLHRADYVAAQKCVRESY-SIP 225 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHT-TST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHh-CCC
Confidence 44444444442 23345555555555 443
No 115
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=25.56 E-value=2.1e+02 Score=21.42 Aligned_cols=53 Identities=9% Similarity=0.001 Sum_probs=33.7
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
.+-..|+..|..+++.+|.++.-....-.-| ...++-.-.+..|+-++..+|.
T Consensus 18 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~--~~~~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 18 KDFDTALKHYDKAKELDPTNMTYITNQAAVY--FEKGDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH--HHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCccHHHHHHHHHHH--HHhccHHHHHHHHHHHHhhccc
Confidence 4456788888888888776654333222222 3355566677888888777764
No 116
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=25.56 E-value=2.9e+02 Score=22.89 Aligned_cols=118 Identities=12% Similarity=0.101 Sum_probs=63.9
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHHHH-----HHHHHHHHHHHHhhhhHH-HHHHHHHHHHHHHHhhhhhHHHHHHH
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQKMT-----LRFQQTVQSLEEEGNAEK-HQLIVMHQQRVAARINQHKKDAMNCY 434 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~l~-----qhFQ~~V~sLEeE~a~Er-qqLvetH~aRVeA~LNdrRR~Ale~Y 434 (564)
+.+|++|..-++..-+.||.-.+....--. ..|...+..+++-..... .-.+-...+.+. ....+-..|++.|
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~ 96 (184)
T 3vtx_A 18 KGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN-FMIDEKQAAIDAL 96 (184)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH-HHcCCHHHHHHHH
Confidence 477888888777766677776543322111 112222222222111111 111112222222 2334456899999
Q ss_pred HHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH
Q psy5197 435 IEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 435 l~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA 481 (564)
..|+..+|-++.-.... ..+-...++-.-.|..|+.++..+|.-+
T Consensus 97 ~~a~~~~~~~~~~~~~l--g~~~~~~g~~~~A~~~~~~~l~~~p~~~ 141 (184)
T 3vtx_A 97 QRAIALNTVYADAYYKL--GLVYDSMGEHDKAIEAYEKTISIKPGFI 141 (184)
T ss_dssp HHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhCccchHHHHHH--HHHHHHhCCchhHHHHHHHHHHhcchhh
Confidence 99999887766533322 2233345555668999999999998753
No 117
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=25.25 E-value=1.5e+02 Score=25.46 Aligned_cols=25 Identities=8% Similarity=0.205 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHH
Q psy5197 413 VMHQQRVAARINQHKKDAMNCYIEA 437 (564)
Q Consensus 413 etH~aRVeA~LNdrRR~Ale~Yl~A 437 (564)
+.|..++.+.|..=++..++|||+.
T Consensus 128 e~h~~~l~~~l~~i~~~g~~~y~~~ 152 (154)
T 3r2k_A 128 EDHAYWLEQQLGLIARMGLENYLQS 152 (154)
T ss_dssp HTHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHh
Confidence 3488899999999999999999974
No 118
>2ar5_A Phosphoinositide 3-kinase; PX domain, transferase; 1.80A {Homo sapiens} PDB: 2rea_A 2red_A
Probab=25.11 E-value=29 Score=30.01 Aligned_cols=22 Identities=23% Similarity=0.495 Sum_probs=17.6
Q ss_pred hhhhhHHHHHHHHHHHccCCCC
Q psy5197 423 INQHKKDAMNCYIEALNDVSLN 444 (564)
Q Consensus 423 LNdrRR~Ale~Yl~ALq~~pP~ 444 (564)
+-++||.+|+.||..|-+-||.
T Consensus 80 ~~e~Rr~~Le~yL~~ll~~p~~ 101 (121)
T 2ar5_A 80 VAAKRKIELNSYLQSLMNASTD 101 (121)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCch
Confidence 4467889999999999877653
No 119
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=24.10 E-value=5.5e+02 Score=28.24 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhhhhhhh
Q psy5197 428 KDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMTM 505 (564)
Q Consensus 428 R~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmNQSLsL 505 (564)
..||+.|...+....-+..++-.||+|=.+....|=.-.|.-|+|=... ..+|.+.-.+ --|||-+-|.++|
T Consensus 152 ekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~~a-L~~aIe~Er~-----~~~EEAIqe~~dm 223 (526)
T 3iyk_A 152 NKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDA-LKNAIEVERD-----GMQEEAIQEIAGM 223 (526)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHH-HHHHHHHHHh-----HHHHHHHHHHhcc
Confidence 3588888888888777777888888877777777777788888873321 1222222222 2367777777765
No 120
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=24.02 E-value=3.1e+02 Score=22.77 Aligned_cols=127 Identities=12% Similarity=0.063 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy5197 393 FQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKH 472 (564)
Q Consensus 393 FQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LNdrRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqH 472 (564)
+..-++++++-.......-+.--.-=..-+-..+-..|++.|..||.-+|-++. .-...-.+-...++-.-.+.+|+.
T Consensus 13 ~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~--a~~~lg~~~~~~~~~~~A~~~~~~ 90 (150)
T 4ga2_A 13 VERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPK--AHRFLGLLYELEENTDKAVECYRR 90 (150)
T ss_dssp HHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHcCchHHHHHHHHH
Q ss_pred HhhcChh--HHhhcchhHHHHHHHHHHHh----hhhhhhhhhchhhHHHhHHHHH
Q psy5197 473 LLATNLD--FAVKEKPMTLEHLVDIDHTI----NQSMTMLQRHPALAVKISELMQ 521 (564)
Q Consensus 473 v~avdPe--kAaqmk~qvltHL~vIeeRm----NQSLsLLyr~P~la~eI~~~id 521 (564)
++..+|. .|-...-.++..+...++.+ ++++.+--++|.+..-......
T Consensus 91 al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 91 SVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
No 121
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=24.00 E-value=2.7e+02 Score=22.09 Aligned_cols=68 Identities=7% Similarity=0.012 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHh-hhhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 411 LIVMHQQRVAARI-NQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 411 LvetH~aRVeA~L-NdrRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
..+.+...-...+ ..+-..|+..|..+|+.+|.++.-.... ..+-...++-.-.+..|+.++..+|..
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~--a~~~~~~~~~~~A~~~~~~a~~~~~~~ 80 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNR--SLAYLRTECYGYALGDATRAIELDKKY 80 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHH--HHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 3344444433333 3445689999999999988775433322 223334566777899999999988864
No 122
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=23.98 E-value=3.7e+02 Score=23.62 Aligned_cols=92 Identities=8% Similarity=-0.022 Sum_probs=55.2
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHcc
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALND 440 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LNdrRR~Ale~Yl~ALq~ 440 (564)
+.+|++|..-++..-+.+|+-.+.... ++.+... ..+-..|+..|..||..
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~a~~~----------------------------lg~~~~~-~g~~~~A~~~~~~al~~ 68 (217)
T 2pl2_A 18 LGRYDAALTLFERALKENPQDPEALYW----------------------------LARTQLK-LGLVNPALENGKTLVAR 68 (217)
T ss_dssp TTCHHHHHHHHHHHHTTSSSCHHHHHH----------------------------HHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHH----------------------------HHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 366788888777777777765422111 1111111 23456899999999999
Q ss_pred CCCChhHHHHHHHHHHHH---------HhhhhhhHHHHHHHHhhcChhHH
Q psy5197 441 VSLNTHKVQKCLQKLLRA---------LHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 441 ~pP~phrVl~aLkrYvRA---------e~KDR~HTirHYqHv~avdPekA 481 (564)
+|-++.-....-.-|.+. ...+-.=.+.+|+.++..+|..+
T Consensus 69 ~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 69 TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 887765433322223222 01444557889999999988743
No 123
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=23.69 E-value=4e+02 Score=23.89 Aligned_cols=54 Identities=17% Similarity=0.097 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHH
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFA 481 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekA 481 (564)
+-..|++.|..++...|.++.-....-.-|.+ ..+-.-.+..|+.++..+|...
T Consensus 169 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~~~A~~~~~~a~~~~~~~~ 222 (359)
T 3ieg_A 169 EPRKAISDLKAASKLKSDNTEAFYKISTLYYQ--LGDHELSLSEVRECLKLDQDHK 222 (359)
T ss_dssp CHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--cCCHHHHHHHHHHHHhhCccch
Confidence 34578888888888887777544444344433 4455567788888887777643
No 124
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=23.64 E-value=4.8e+02 Score=24.76 Aligned_cols=81 Identities=14% Similarity=0.111 Sum_probs=51.5
Q ss_pred HHHHHHHHHhhh-hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHH
Q psy5197 414 MHQQRVAARINQ-HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHL 492 (564)
Q Consensus 414 tH~aRVeA~LNd-rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL 492 (564)
.+.....+.... +-..|++.|..++..+|.++.-.+....-|. ..++-.-.+..|+.++..+|.. +.+...|
T Consensus 297 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~--~~~~~~~A~~~~~~al~~~p~~-----~~~~~~l 369 (450)
T 2y4t_A 297 SKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYL--IEEMYDEAIQDYETAQEHNEND-----QQIREGL 369 (450)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHTTSSSC-----HHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHhCcch-----HHHHHHH
Confidence 344444444332 3457889999999888777754444444443 3555666889999999988874 4456666
Q ss_pred HHHHHHhhh
Q psy5197 493 VDIDHTINQ 501 (564)
Q Consensus 493 ~vIeeRmNQ 501 (564)
..+.....+
T Consensus 370 ~~~~~~~~~ 378 (450)
T 2y4t_A 370 EKAQRLLKQ 378 (450)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhc
Confidence 666555544
No 125
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=23.51 E-value=1.2e+02 Score=29.48 Aligned_cols=20 Identities=20% Similarity=0.237 Sum_probs=11.4
Q ss_pred hhhhhhHHHHHHHHhhcChh
Q psy5197 460 HKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 460 ~KDR~HTirHYqHv~avdPe 479 (564)
.++-.-.|.+|+.++..+|.
T Consensus 243 ~g~~~~A~~~~~~al~~~p~ 262 (338)
T 2if4_A 243 LKRYDEAIGHCNIVLTEEEK 262 (338)
T ss_dssp TTCCHHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHHhCCC
Confidence 33444556666666666664
No 126
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=23.40 E-value=3.7e+02 Score=23.43 Aligned_cols=54 Identities=17% Similarity=0.099 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
+-..|++.|..+|+.+|-++.-....=.-|...-.++..-.+..|+.++..+|.
T Consensus 103 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (208)
T 3urz_A 103 QEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKM 156 (208)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHH
T ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCch
Confidence 456899999999999988876554443444433334444456677777665553
No 127
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=23.11 E-value=3.2e+02 Score=22.52 Aligned_cols=55 Identities=9% Similarity=-0.139 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAV 482 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAa 482 (564)
+-..|++.|..||..+|-++.-.+..=. +-....+-.-.+.+|+.++..+|....
T Consensus 60 ~~~~A~~~~~~al~~~p~~~~~~~~lg~--~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 60 QHEKAAEDAELATVVDPKYSKAWSRLGL--ARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHH--HHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 4568999999999999877654433322 333455566678899999988887543
No 128
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=23.02 E-value=4.7e+02 Score=24.49 Aligned_cols=20 Identities=20% Similarity=0.187 Sum_probs=9.4
Q ss_pred hhHHHHHHHHHHHccCCCCh
Q psy5197 426 HKKDAMNCYIEALNDVSLNT 445 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~p 445 (564)
+-..|+..|-.++...|.++
T Consensus 181 ~~~eA~~~~~~~l~~~p~~~ 200 (291)
T 3mkr_A 181 KLQDAYYIFQEMADKCSPTL 200 (291)
T ss_dssp HHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCCCcH
Confidence 33445555555555444443
No 129
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=22.94 E-value=4e+02 Score=23.64 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=59.1
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHc
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARIN-QHKKDAMNCYIEALN 439 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LN-drRR~Ale~Yl~ALq 439 (564)
+.+|.+|..-++.+-+.+|..... ..+ ...+..+. .++.+.+...-...+. .+-..|+..|..+|.
T Consensus 110 ~~~~~~A~~~~~~~l~~~p~~~~~-~~a-----~~~~~~~~-------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDRYPNHELV-DDA-----TQKIRELR-------AKLARKQYEAARLYERRELYEAAAVTYEAVFD 176 (261)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCTTH-HHH-----HHHHHHHH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCcCchhH-HHH-----HHHHHHHH-------HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 567788877777766656654211 111 11122222 2333333333333333 334689999999999
Q ss_pred cCCCChh---HHHHHHHHHHHH--------HhhhhhhHHHHHHHHhhcChhH
Q psy5197 440 DVSLNTH---KVQKCLQKLLRA--------LHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 440 ~~pP~ph---rVl~aLkrYvRA--------e~KDR~HTirHYqHv~avdPek 480 (564)
..|-.+. -.+..-.-|.+. ..++-.-.+.+|+.++..+|.-
T Consensus 177 ~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 228 (261)
T 3qky_A 177 AYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDS 228 (261)
T ss_dssp HCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCC
Confidence 8765432 233333444443 2244456899999999988863
No 130
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=22.59 E-value=5e+02 Score=24.61 Aligned_cols=52 Identities=15% Similarity=0.073 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 427 KKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 427 RR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
-..|++.|..++..+|.++.-....-.-|. ...+-.-.+.+|+.++..+|..
T Consensus 193 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~--~~g~~~~A~~~~~~~~~~~p~~ 244 (450)
T 2y4t_A 193 PRKAISDLKAASKLKNDNTEAFYKISTLYY--QLGDHELSLSEVRECLKLDQDH 244 (450)
T ss_dssp GGGGHHHHHHHHHHHCSCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHhCCCh
Confidence 346777777777777666543333323222 3344455677777777766654
No 131
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=22.45 E-value=4.1e+02 Score=23.60 Aligned_cols=53 Identities=11% Similarity=0.027 Sum_probs=36.7
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
+-..|++.|..+++..|.++.-.+..-.-|. ...+-.-.+.+|+.++..+|..
T Consensus 140 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~--~~~~~~~A~~~~~~al~~~~~~ 192 (330)
T 3hym_B 140 EHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG--LTNNSKLAERFFSQALSIAPED 192 (330)
T ss_dssp CHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH--HTTCHHHHHHHHHHHHTTCTTC
T ss_pred CHHHHHHHHHHHHHhccccHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHhCCCC
Confidence 3468999999999988776654444333333 3455566788888888888874
No 132
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=22.08 E-value=4.1e+02 Score=27.07 Aligned_cols=52 Identities=12% Similarity=0.017 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHh---hhhhhHHHHHHHHhhcChh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALH---KDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~---KDR~HTirHYqHv~avdPe 479 (564)
+-..|++.|..||+.+|-++.-......-|. .. .+-.-.+..|+.++..+|.
T Consensus 106 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~--~~~~~g~~~~A~~~~~~al~~~p~ 160 (568)
T 2vsy_A 106 QAEAAAAAYTRAHQLLPEEPYITAQLLNWRR--RLCDWRALDVLSAQVRAAVAQGVG 160 (568)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH--HTTCCTTHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HhhccccHHHHHHHHHHHHhcCCc
Confidence 3467888888888887766543333222222 23 4555567777777777765
No 133
>1evs_A Oncostatin M; 4-helix bundle, GP130 binding cytokine; 2.20A {Homo sapiens} SCOP: a.26.1.1
Probab=21.64 E-value=7.3 Score=36.95 Aligned_cols=77 Identities=25% Similarity=0.359 Sum_probs=33.5
Q ss_pred hhhhhccccCCCCCCcccccccccCCccccCCCCCCCCCCCcCCCccccccccCCCCCCCCCCCCCCCCCchhhHHHHHH
Q psy5197 266 RHVANMQINGYENPTYKYFEIKDYDSYENIVSPSSGPASSTTTPTSTATTKSHATTRVPTPDPYFTHFEPKDEHHAFKEA 345 (564)
Q Consensus 266 ~~~~n~~~n~~Enp~Y~yfe~k~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~pt~D~Yfe~~~~~~EH~~F~~A 345 (564)
+..|.-||-|+-|-.|||.-.-...+ ++.|+.++..+++|++|.|++|.|= -.-|-.+|+.-
T Consensus 111 ~~~a~~ni~G~rNNi~CMaqLL~~s~--------------~aepTqa~~gasp~~~ptp~sd~Fq----~kl~gCrFL~G 172 (187)
T 1evs_A 111 LQMARPNILGLRNNIYCMAQLLDNSD--------------TAEPTKAGRGASQPPTPTPASDAFQ----RKLEGCRFLHG 172 (187)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCC-----------------------------------CCCHHH----HHHHHHHHHHH
T ss_pred HhhhccchhhhhhhHHHHHHHcCCcc--------------CCCCCCCCCCCCCCCCCCCCcHHHH----HHhccchhHHH
Confidence 34444556689999999885542111 1222222223333444556677641 12244455443
Q ss_pred HHHHHHHHHHHHHhhhhch
Q psy5197 346 LQRLEEMHREKVTKVMKDW 364 (564)
Q Consensus 346 k~~LE~rhr~rm~~VmKEW 364 (564)
=- |-|.-+-+|.+||
T Consensus 173 YH----RfM~SvG~Vf~eW 187 (187)
T 1evs_A 173 YH----RFMHSVGRVFSKW 187 (187)
T ss_dssp HH----HHHHHHHHHHHTC
T ss_pred HH----HHHHHHHHHhhcC
Confidence 32 2356788899998
No 134
>1u2m_A Histone-like protein HLP-1; coiled coil, chaperone; 2.30A {Escherichia coli} SCOP: f.48.1.1 PDB: 1sg2_A
Probab=21.64 E-value=29 Score=30.51 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHHHHHH---HHHHhhhhchHHHHHHHh-hcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q psy5197 338 EHHAFKEALQRLEEMHR---EKVTKVMKDWSDLEERYQ-DMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIV 413 (564)
Q Consensus 338 EH~~F~~Ak~~LE~rhr---~rm~~VmKEW~eAe~q~k-nL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLve 413 (564)
++..++.|...|+..-. ..+....+++......++ .|....-...+..=+.+.+.||...+.+.++....++.+..
T Consensus 17 ~~~~~k~a~~~l~~~~~~~~~el~~~~~el~~~~~~lq~~ls~~~~~~~~~el~~~~~~~q~~~~~~~~~l~~~~~~~~~ 96 (143)
T 1u2m_A 17 QVAQKTGVSNTLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFEQDRARRSNEERG 96 (143)
T ss_dssp HHHHHHTTTTTTC---------------------------------------------------------CHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666665433 334444455555544444 12111101111111234555666666666666666666555
Q ss_pred HHHHHHHHH
Q psy5197 414 MHQQRVAAR 422 (564)
Q Consensus 414 tH~aRVeA~ 422 (564)
-=+.+|...
T Consensus 97 ~i~~~i~~a 105 (143)
T 1u2m_A 97 KLVTRIQTA 105 (143)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444433
No 135
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=21.47 E-value=2.5e+02 Score=20.78 Aligned_cols=56 Identities=13% Similarity=0.127 Sum_probs=39.1
Q ss_pred hhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHh
Q psy5197 426 HKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAV 482 (564)
Q Consensus 426 rRR~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAa 482 (564)
+-..|++.|..+|..+|-.+..++..| ..+-...++-.-.+.+|+.++..+|.-+.
T Consensus 15 ~~~~A~~~~~~al~~~p~~~~~~~~~l-g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 70 (99)
T 2kc7_A 15 DIENALQALEEFLQTEPVGKDEAYYLM-GNAYRKLGDWQKALNNYQSAIELNPDSPA 70 (99)
T ss_dssp CHHHHHHHHHHHHHHCSSTHHHHHHHH-HHHHHHHTCHHHHHHHHHHHHHHCTTSTH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHH-HHHHHHcCCHHHHHHHHHHHHhcCCCcHH
Confidence 346899999999999887765233222 22333455666789999999999987543
No 136
>3thf_A Protein shroom; coiled-coil, anti-parallel, helical, RHO-kinase, actin-bindi protein binding, cytoskeleton regulator; 2.70A {Drosophila melanogaster}
Probab=21.47 E-value=67 Score=31.06 Aligned_cols=40 Identities=23% Similarity=0.229 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhh
Q psy5197 447 KVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTIN 500 (564)
Q Consensus 447 rVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmN 500 (564)
-|...|-+|+-+++ ++-|+|.+ +||+.++.--+.||++|-
T Consensus 133 ~V~~iL~~~L~~eq------l~DY~~fv--------~mKa~Ll~eqReLddkIk 172 (190)
T 3thf_A 133 SIAGLLAKNLSADM------CADYDYFI--------NMKAKLIADARDLAVRIK 172 (190)
T ss_dssp HHHHHHHHHSCHHH------HHHHHHHH--------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHH------HHHHHHHH--------HHHHHHHHHHHhHHHHHH
Confidence 35566777777775 67788874 899999999999999984
No 137
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=21.44 E-value=6e+02 Score=25.10 Aligned_cols=117 Identities=11% Similarity=0.114 Sum_probs=70.7
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHH----HHHHHHHHHHHHHHhhhhHHHHH----HHHHHHHHHHHhhhhhHHHHH
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQK----MTLRFQQTVQSLEEEGNAEKHQL----IVMHQQRVAARINQHKKDAMN 432 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~----l~qhFQ~~V~sLEeE~a~ErqqL----vetH~aRVeA~LNdrRR~Ale 432 (564)
+.++++|...+..+...+|...-.+-.. -.++|...+..|++-.. -...+ +-.-+.+..+.|+ +-..|+.
T Consensus 115 ~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~-~~d~~~~~~a~~~LG~al~~LG-~~~eAl~ 192 (282)
T 4f3v_A 115 QGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGK-WPDKFLAGAAGVAHGVAAANLA-LFTEAER 192 (282)
T ss_dssp HTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGG-CSCHHHHHHHHHHHHHHHHHTT-CHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhc-cCCcccHHHHHHHHHHHHHHCC-CHHHHHH
Confidence 3678888888888877776432111111 23456666666652221 11122 3345566777776 6679999
Q ss_pred HHHHHHccCC-CChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChh
Q psy5197 433 CYIEALNDVS-LNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLD 479 (564)
Q Consensus 433 ~Yl~ALq~~p-P~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPe 479 (564)
.|-.++...- |...--...-+-.+-..+-+---.+.+|+-+++.+|.
T Consensus 193 ~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 193 RLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 9999996542 5421111223444555566667888999999999997
No 138
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.39 E-value=28 Score=28.15 Aligned_cols=18 Identities=28% Similarity=0.440 Sum_probs=10.7
Q ss_pred Ccccccccc---Ccccccchh
Q psy5197 55 EHCVFDHIH---NQSKCWEYE 72 (564)
Q Consensus 55 e~CkF~H~e---~md~C~~~~ 72 (564)
+.|+|.|.. +...|..|.
T Consensus 53 ~~C~f~H~~~~~~~~~C~~f~ 73 (77)
T 2d9n_A 53 KECPFLHIDPESKIKDCPWSG 73 (77)
T ss_dssp SSCSSBCCCTTSSCSSSSCCT
T ss_pred CCeeccCCCccccCCCCcccc
Confidence 577777764 344565553
No 139
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=20.84 E-value=3.6e+02 Score=22.28 Aligned_cols=51 Identities=10% Similarity=-0.022 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhH
Q psy5197 428 KDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDF 480 (564)
Q Consensus 428 R~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPek 480 (564)
..|+..|..+|..+|-++.-.+..-. +-...++-.-.+.+|+.++..+|.-
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~--~~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLAS--DAFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHH--HHHHcccHHHHHHHHHHHHhhCCCC
Confidence 88999999999998877644333222 3334566667899999999999975
No 140
>3p0c_A Nischarin; structural genomics, structural genomics consortium, SGC, PX signaling protein; 2.27A {Homo sapiens}
Probab=20.58 E-value=46 Score=29.20 Aligned_cols=20 Identities=10% Similarity=0.260 Sum_probs=16.9
Q ss_pred hhhhHHHHHHHHHHHccCCC
Q psy5197 424 NQHKKDAMNCYIEALNDVSL 443 (564)
Q Consensus 424 NdrRR~Ale~Yl~ALq~~pP 443 (564)
-++||.+|+.||..|-..|.
T Consensus 91 ie~Rr~~Le~yL~~l~~~p~ 110 (130)
T 3p0c_A 91 VEKREKDLEVYLQKLLAAFP 110 (130)
T ss_dssp HHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHcChh
Confidence 35789999999999988865
No 141
>4az9_A Sorting nexin-24; protein transport; 1.75A {Homo sapiens}
Probab=20.38 E-value=49 Score=29.11 Aligned_cols=29 Identities=14% Similarity=0.299 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHHHHccCCCChhHHHHHHHHHH
Q psy5197 425 QHKKDAMNCYIEALNDVSLNTHKVQKCLQKLL 456 (564)
Q Consensus 425 drRR~Ale~Yl~ALq~~pP~phrVl~aLkrYv 456 (564)
++||.+|+.||..|-..|.... ++|+.++
T Consensus 94 e~Rr~~Le~yL~~ll~~~~~~~---~~l~~FL 122 (129)
T 4az9_A 94 EQRRQGLETYLQAVILENEELP---KLFLDFL 122 (129)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCC---HHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCchhhC---HHHHHHC
Confidence 5688899999999887665432 3455555
No 142
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=20.34 E-value=7.6e+02 Score=26.94 Aligned_cols=81 Identities=9% Similarity=0.086 Sum_probs=56.2
Q ss_pred HHHHHHHHHHccCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhhhhhhhhhh
Q psy5197 429 DAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMTMLQR 508 (564)
Q Consensus 429 ~Ale~Yl~ALq~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmNQSLsLLyr 508 (564)
.-|.|+|.-++...-..+.....|..++|--++.+.-.=+-|..+. ..+=.|+-+|.++||--++.|.-
T Consensus 68 ~kLkn~L~~~s~s~~~s~~y~~~~~~~lk~~~~q~~dndn~~~e~S-----------~eLe~ri~yIK~kVd~qi~~Irv 136 (491)
T 1m1j_A 68 DNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVS-----------TELRRRIVTLKQRVATQVNRIKA 136 (491)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhccchhHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478899999998889999999999999999999888877777653 34445556666666655444433
Q ss_pred chhhHHHhHHHH
Q psy5197 509 HPALAVKISELM 520 (564)
Q Consensus 509 ~P~la~eI~~~i 520 (564)
.-.+-+.++-.|
T Consensus 137 Lq~~l~~q~skI 148 (491)
T 1m1j_A 137 LQNSIQEQVVEM 148 (491)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 143
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=20.32 E-value=2.8e+02 Score=20.93 Aligned_cols=104 Identities=11% Similarity=0.042 Sum_probs=0.0
Q ss_pred hhchHHHHHHHhhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHc
Q psy5197 361 MKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKK-DAMNCYIEALN 439 (564)
Q Consensus 361 mKEW~eAe~q~knL~~adPkaae~~rq~l~qhFQ~~V~sLEeE~a~ErqqLvetH~aRVeA~LNdrRR-~Ale~Yl~ALq 439 (564)
+++|.+|..-++..-..+|... ..+...-...+...+- .|++.|..++.
T Consensus 29 ~~~~~~A~~~~~~al~~~~~~~------------------------------~~~~~la~~~~~~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 29 KGDYPQAMKHYTEAIKRNPKDA------------------------------KLYSNRAACYTKLLEFQLALKDCEECIQ 78 (133)
T ss_dssp TTCSHHHHHHHHHHHTTCTTCH------------------------------HHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCcH------------------------------HHHHHHHHHHHHhccHHHHHHHHHHHHH
Q ss_pred cCCCChhHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcChhHHhhcchhHHHHHHHHHHHhhh
Q psy5197 440 DVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQ 501 (564)
Q Consensus 440 ~~pP~phrVl~aLkrYvRAe~KDR~HTirHYqHv~avdPekAaqmk~qvltHL~vIeeRmNQ 501 (564)
.+|.++.-.+..-.-|.+..+-+. .+.+|+.++..+|.. ..++..|..+..++|.
T Consensus 79 ~~~~~~~~~~~la~~~~~~~~~~~--A~~~~~~~~~~~p~~-----~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 79 LEPTFIKGYTRKAAALEAMKDYTK--AMDVYQKALDLDSSC-----KEAADGYQRCMMAQYN 133 (133)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHH--HHHHHHHHHHHCGGG-----THHHHHHHHHHHHHTC
T ss_pred hCCCchHHHHHHHHHHHHHhhHHH--HHHHHHHHHHhCCCc-----hHHHHHHHHHHHHhcC
Done!