Query psy520
Match_columns 455
No_of_seqs 397 out of 2772
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 19:53:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy520.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/520hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187|consensus 100.0 1.8E-53 4E-58 424.5 26.1 281 150-453 61-353 (361)
2 KOG0192|consensus 100.0 2.3E-48 5.1E-53 385.7 24.3 251 176-454 47-305 (362)
3 KOG0575|consensus 100.0 1.4E-48 3E-53 391.2 21.6 248 170-447 18-268 (592)
4 KOG0615|consensus 100.0 3.1E-49 6.6E-54 378.6 14.7 257 168-447 170-436 (475)
5 KOG0581|consensus 100.0 1.8E-48 3.9E-53 370.8 18.9 241 176-447 85-334 (364)
6 KOG0595|consensus 100.0 2.8E-47 6E-52 365.6 18.2 208 170-397 10-226 (429)
7 KOG0197|consensus 100.0 1.6E-46 3.5E-51 372.6 20.7 249 176-454 212-463 (468)
8 KOG0598|consensus 100.0 1.5E-46 3.1E-51 357.6 17.5 238 173-440 28-269 (357)
9 KOG0591|consensus 100.0 4.5E-47 9.7E-52 347.7 12.9 255 172-450 21-283 (375)
10 KOG0592|consensus 100.0 1.5E-45 3.2E-50 363.9 17.9 248 173-447 76-337 (604)
11 KOG0593|consensus 100.0 1.5E-45 3.1E-50 340.8 16.4 257 172-447 4-283 (396)
12 KOG0198|consensus 100.0 8.6E-45 1.9E-49 350.4 19.1 250 172-448 19-276 (313)
13 KOG0583|consensus 100.0 4.5E-44 9.8E-49 357.8 23.1 250 170-446 17-273 (370)
14 KOG0616|consensus 100.0 1.5E-44 3.3E-49 333.3 18.1 231 176-439 50-283 (355)
15 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.8E-43 3.9E-48 352.2 21.7 259 171-454 8-336 (338)
16 KOG0578|consensus 100.0 2.3E-43 5E-48 351.1 19.5 260 157-447 260-522 (550)
17 KOG0661|consensus 100.0 4.2E-44 9.1E-49 348.8 13.1 255 172-447 12-290 (538)
18 KOG0659|consensus 100.0 7.2E-43 1.6E-47 317.9 20.0 258 171-447 3-280 (318)
19 KOG0582|consensus 100.0 8.3E-43 1.8E-47 337.4 20.6 260 171-447 27-292 (516)
20 PHA02988 hypothetical protein; 100.0 1.9E-42 4.1E-47 336.7 23.0 262 149-452 10-279 (283)
21 KOG0193|consensus 100.0 8E-44 1.7E-48 355.6 13.2 257 173-454 395-655 (678)
22 KOG0600|consensus 100.0 4.6E-43 9.9E-48 343.8 17.2 257 173-447 120-399 (560)
23 KOG0588|consensus 100.0 6.9E-43 1.5E-47 351.6 18.6 245 172-447 14-262 (786)
24 KOG4721|consensus 100.0 1.8E-43 3.9E-48 349.3 11.7 235 176-450 130-366 (904)
25 KOG0597|consensus 100.0 1.2E-42 2.5E-47 343.8 16.8 244 172-447 4-250 (808)
26 cd05612 STKc_PRKX_like Catalyt 100.0 7.8E-42 1.7E-46 333.5 22.4 243 172-447 3-253 (291)
27 KOG0585|consensus 100.0 1.8E-42 3.8E-47 337.0 17.6 263 170-447 97-371 (576)
28 cd05571 STKc_PKB Catalytic dom 100.0 6.5E-42 1.4E-46 339.2 21.3 242 176-447 1-250 (323)
29 KOG0605|consensus 100.0 6.6E-42 1.4E-46 338.3 19.8 248 170-441 141-435 (550)
30 KOG0694|consensus 100.0 4.2E-42 9.1E-47 348.3 18.7 239 173-442 371-613 (694)
31 cd05096 PTKc_DDR1 Catalytic do 100.0 2.2E-41 4.8E-46 332.1 22.9 262 171-451 6-304 (304)
32 PTZ00263 protein kinase A cata 100.0 4.5E-42 9.7E-47 341.3 17.9 243 172-447 20-270 (329)
33 cd05104 PTKc_Kit Catalytic dom 100.0 1.3E-41 2.7E-46 344.1 21.1 257 172-453 37-375 (375)
34 cd05595 STKc_PKB_beta Catalyti 100.0 3.8E-41 8.1E-46 333.8 23.1 242 176-447 1-250 (323)
35 cd05585 STKc_YPK1_like Catalyt 100.0 2E-41 4.4E-46 334.0 20.8 239 178-446 1-245 (312)
36 KOG0663|consensus 100.0 9.6E-42 2.1E-46 319.3 17.2 255 174-447 80-360 (419)
37 KOG0580|consensus 100.0 5.2E-42 1.1E-46 308.1 14.7 245 173-447 25-272 (281)
38 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.1E-41 4.7E-46 336.7 20.9 259 172-447 2-289 (338)
39 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.4E-41 1.2E-45 327.0 23.0 261 167-447 2-284 (288)
40 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.5E-41 7.5E-46 324.4 20.9 253 172-453 7-266 (266)
41 cd05631 STKc_GRK4 Catalytic do 100.0 3.4E-41 7.5E-46 327.9 21.1 251 172-447 2-260 (285)
42 cd07848 STKc_CDKL5 Catalytic d 100.0 6.3E-41 1.4E-45 325.7 22.9 258 172-447 3-283 (287)
43 cd05593 STKc_PKB_gamma Catalyt 100.0 2.7E-41 5.9E-46 335.5 20.7 242 176-447 1-250 (328)
44 PTZ00426 cAMP-dependent protei 100.0 1.5E-41 3.3E-46 339.0 18.4 242 173-447 33-283 (340)
45 cd05106 PTKc_CSF-1R Catalytic 100.0 2.5E-41 5.5E-46 341.7 19.7 256 173-453 41-373 (374)
46 KOG1026|consensus 100.0 4.7E-42 1E-46 356.3 13.9 253 175-453 491-763 (774)
47 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.3E-41 9.3E-46 334.6 20.2 251 172-447 3-256 (333)
48 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-40 2.5E-45 318.8 21.7 249 177-452 2-255 (257)
49 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.3E-40 2.7E-45 326.7 21.9 259 169-447 4-287 (303)
50 cd05108 PTKc_EGFR Catalytic do 100.0 9.1E-41 2E-45 329.8 21.0 255 172-454 9-270 (316)
51 cd05584 STKc_p70S6K Catalytic 100.0 7.9E-41 1.7E-45 331.4 20.6 243 176-447 2-255 (323)
52 cd05111 PTK_HER3 Pseudokinase 100.0 2.8E-40 6E-45 320.4 23.4 255 173-455 10-271 (279)
53 KOG0201|consensus 100.0 4.2E-42 9.1E-47 332.3 10.5 242 175-447 18-262 (467)
54 KOG0194|consensus 100.0 3.1E-41 6.8E-46 339.7 17.1 253 175-454 162-422 (474)
55 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-40 3.2E-45 322.3 21.3 254 173-452 8-283 (283)
56 cd05071 PTKc_Src Catalytic dom 100.0 5.1E-40 1.1E-44 315.5 24.4 255 170-454 6-262 (262)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 2.4E-40 5.3E-45 329.0 22.9 255 172-447 7-300 (331)
58 cd05590 STKc_nPKC_eta Catalyti 100.0 1.3E-40 2.8E-45 329.5 20.2 237 176-442 1-241 (320)
59 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.8E-40 6E-45 336.3 22.9 259 171-454 38-399 (400)
60 KOG0611|consensus 100.0 3.7E-41 8.1E-46 321.6 15.1 249 168-448 51-303 (668)
61 cd05591 STKc_nPKC_epsilon Cata 100.0 1.5E-40 3.3E-45 329.0 20.2 242 176-447 1-253 (321)
62 cd05072 PTKc_Lyn Catalytic dom 100.0 3E-40 6.6E-45 316.3 21.6 251 172-452 8-261 (261)
63 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-40 4.5E-45 327.4 20.8 241 176-446 1-246 (316)
64 cd05589 STKc_PKN Catalytic dom 100.0 2E-40 4.3E-45 328.6 20.3 245 172-447 1-256 (324)
65 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-40 3.2E-45 329.7 19.4 243 176-447 1-251 (325)
66 cd05114 PTKc_Tec_Rlk Catalytic 100.0 8.1E-40 1.7E-44 312.6 23.7 247 173-450 7-256 (256)
67 cd07862 STKc_CDK6 Catalytic do 100.0 6.6E-40 1.4E-44 319.0 23.2 258 171-447 2-286 (290)
68 cd05570 STKc_PKC Catalytic dom 100.0 2.8E-40 6E-45 326.8 20.4 242 176-447 1-251 (318)
69 cd05115 PTKc_Zap-70 Catalytic 100.0 6.5E-40 1.4E-44 314.0 22.3 250 177-453 2-256 (257)
70 cd05626 STKc_LATS2 Catalytic d 100.0 2.3E-40 5E-45 335.6 20.0 253 172-447 3-304 (381)
71 cd05620 STKc_nPKC_delta Cataly 100.0 3.3E-40 7.2E-45 326.0 20.5 241 176-446 1-246 (316)
72 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-40 2.5E-45 333.4 17.3 252 172-447 3-284 (350)
73 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.4E-40 1.8E-44 313.2 22.6 250 172-451 8-259 (260)
74 cd05614 STKc_MSK2_N N-terminal 100.0 2E-40 4.4E-45 329.5 19.0 248 172-447 2-266 (332)
75 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-39 3.9E-44 311.6 24.8 250 174-453 10-263 (263)
76 cd05628 STKc_NDR1 Catalytic do 100.0 7E-40 1.5E-44 329.9 23.0 253 172-447 3-292 (363)
77 cd05587 STKc_cPKC Catalytic do 100.0 3.7E-40 8.1E-45 326.7 20.6 241 172-442 2-246 (324)
78 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-39 2.4E-44 312.5 23.3 251 171-451 7-259 (260)
79 cd05619 STKc_nPKC_theta Cataly 100.0 5E-40 1.1E-44 324.8 21.3 241 176-446 1-246 (316)
80 cd05068 PTKc_Frk_like Catalyti 100.0 7.5E-40 1.6E-44 313.7 21.9 251 172-452 8-261 (261)
81 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.5E-40 1.6E-44 317.6 22.1 265 171-453 5-282 (283)
82 cd05033 PTKc_EphR Catalytic do 100.0 8E-40 1.7E-44 314.4 22.0 253 173-453 7-266 (266)
83 cd05060 PTKc_Syk_like Catalyti 100.0 8.4E-40 1.8E-44 312.7 22.0 250 176-453 1-256 (257)
84 cd05599 STKc_NDR_like Catalyti 100.0 2.9E-40 6.2E-45 332.6 19.6 252 172-447 3-295 (364)
85 KOG2345|consensus 100.0 1.5E-40 3.2E-45 300.1 15.5 262 170-453 21-301 (302)
86 cd05049 PTKc_Trk Catalytic dom 100.0 5.1E-40 1.1E-44 317.8 20.5 253 173-451 8-280 (280)
87 cd05616 STKc_cPKC_beta Catalyt 100.0 4.7E-40 1E-44 325.8 20.4 241 172-442 2-246 (323)
88 cd05084 PTKc_Fes Catalytic dom 100.0 7.4E-40 1.6E-44 312.0 20.9 248 176-451 1-252 (252)
89 PF07714 Pkinase_Tyr: Protein 100.0 3E-40 6.5E-45 316.9 18.2 248 175-449 4-259 (259)
90 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-39 2.5E-44 314.0 22.3 255 174-453 3-272 (272)
91 KOG1095|consensus 100.0 1.4E-40 3.1E-45 356.7 17.6 255 174-454 696-963 (1025)
92 cd05109 PTKc_HER2 Catalytic do 100.0 9.6E-40 2.1E-44 316.3 21.7 254 173-454 10-270 (279)
93 cd06650 PKc_MEK1 Catalytic dom 100.0 1E-39 2.3E-44 324.8 22.4 255 172-447 7-298 (333)
94 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.2E-39 2.6E-44 312.1 22.0 251 172-452 8-260 (260)
95 cd05054 PTKc_VEGFR Catalytic d 100.0 5.9E-40 1.3E-44 327.1 20.4 259 171-454 8-335 (337)
96 KOG0660|consensus 100.0 1.6E-40 3.4E-45 315.3 15.3 264 166-447 18-309 (359)
97 cd08228 STKc_Nek6 Catalytic do 100.0 1.6E-39 3.4E-44 312.2 22.6 258 172-452 4-265 (267)
98 cd07868 STKc_CDK8 Catalytic do 100.0 2.9E-39 6.2E-44 318.9 25.0 196 175-388 6-219 (317)
99 cd05596 STKc_ROCK Catalytic do 100.0 2.7E-40 5.9E-45 333.7 18.1 249 173-447 46-303 (370)
100 cd05582 STKc_RSK_N N-terminal 100.0 3.1E-40 6.6E-45 326.3 18.0 238 176-444 2-245 (318)
101 cd06625 STKc_MEKK3_like Cataly 100.0 2.9E-39 6.3E-44 309.5 24.1 254 172-448 4-260 (263)
102 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.6E-39 3.5E-44 319.7 22.8 262 166-447 2-285 (309)
103 PTZ00267 NIMA-related protein 100.0 1.1E-39 2.3E-44 340.0 22.7 249 172-447 69-322 (478)
104 PHA03212 serine/threonine kina 100.0 6E-40 1.3E-44 333.3 20.2 250 171-447 93-375 (391)
105 cd05588 STKc_aPKC Catalytic do 100.0 8.5E-40 1.8E-44 324.9 20.6 241 176-446 1-260 (329)
106 KOG0589|consensus 100.0 1.6E-40 3.5E-45 328.7 15.3 250 171-448 5-258 (426)
107 KOG0032|consensus 100.0 1.4E-39 3.1E-44 325.4 22.2 251 169-447 34-292 (382)
108 cd05575 STKc_SGK Catalytic dom 100.0 3.7E-40 8.1E-45 326.5 17.8 238 176-443 1-242 (323)
109 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-39 3.1E-44 316.9 21.6 257 172-454 2-288 (290)
110 cd05062 PTKc_IGF-1R Catalytic 100.0 1.2E-39 2.5E-44 315.4 20.5 254 172-451 8-277 (277)
111 PTZ00036 glycogen synthase kin 100.0 1.1E-39 2.3E-44 336.4 21.6 255 169-447 65-350 (440)
112 cd05625 STKc_LATS1 Catalytic d 100.0 6.5E-40 1.4E-44 332.3 19.6 252 172-447 3-304 (382)
113 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.8E-39 3.9E-44 310.7 21.4 248 172-450 6-256 (256)
114 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-39 2.9E-44 315.9 20.8 253 173-451 8-282 (283)
115 cd05618 STKc_aPKC_iota Catalyt 100.0 1E-39 2.2E-44 324.4 20.3 237 176-442 1-250 (329)
116 cd05602 STKc_SGK1 Catalytic do 100.0 5.7E-40 1.2E-44 325.5 18.3 241 176-446 1-245 (325)
117 PTZ00283 serine/threonine prot 100.0 1.6E-39 3.6E-44 339.3 22.7 252 171-447 33-296 (496)
118 cd05629 STKc_NDR_like_fungal C 100.0 8.8E-40 1.9E-44 330.8 20.0 252 172-447 3-304 (377)
119 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.9E-39 4E-44 312.0 21.3 252 175-453 10-268 (268)
120 PLN00034 mitogen-activated pro 100.0 1.2E-39 2.6E-44 326.9 20.7 241 175-447 79-327 (353)
121 cd05608 STKc_GRK1 Catalytic do 100.0 2.5E-39 5.5E-44 314.0 22.2 247 178-447 1-256 (280)
122 cd05093 PTKc_TrkB Catalytic do 100.0 5.1E-39 1.1E-43 312.9 24.3 255 173-454 8-281 (288)
123 cd05601 STKc_CRIK Catalytic do 100.0 4.8E-40 1E-44 326.5 17.4 251 172-447 3-262 (330)
124 cd05059 PTKc_Tec_like Catalyti 100.0 2.9E-39 6.4E-44 308.9 22.1 247 172-449 6-255 (256)
125 cd05094 PTKc_TrkC Catalytic do 100.0 2.7E-39 5.8E-44 315.3 22.2 255 173-454 8-284 (291)
126 cd05035 PTKc_Axl_like Catalyti 100.0 5.8E-39 1.3E-43 308.8 24.2 256 173-453 2-273 (273)
127 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.4E-39 7.4E-44 313.0 22.7 265 171-452 5-283 (284)
128 cd05091 PTKc_Ror2 Catalytic do 100.0 9.9E-40 2.1E-44 316.7 18.9 253 173-451 8-282 (283)
129 cd05605 STKc_GRK4_like Catalyt 100.0 1.9E-39 4.2E-44 315.6 20.7 251 172-447 2-260 (285)
130 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.9E-39 4E-44 310.7 20.2 250 173-452 9-261 (261)
131 cd05621 STKc_ROCK2 Catalytic d 100.0 6.3E-40 1.4E-44 331.0 17.8 250 172-447 45-303 (370)
132 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.1E-39 9E-44 321.8 23.4 259 171-454 8-341 (343)
133 KOG0594|consensus 100.0 2.8E-39 6.2E-44 307.5 20.9 256 176-448 17-302 (323)
134 cd05598 STKc_LATS Catalytic do 100.0 4.3E-40 9.2E-45 332.9 16.2 252 172-447 3-300 (376)
135 KOG0599|consensus 100.0 4.1E-40 8.8E-45 300.6 14.3 250 176-447 23-282 (411)
136 cd08229 STKc_Nek7 Catalytic do 100.0 2.5E-39 5.3E-44 310.9 20.5 259 172-453 4-266 (267)
137 cd05066 PTKc_EphR_A Catalytic 100.0 3.3E-39 7.1E-44 310.5 21.0 255 172-453 6-267 (267)
138 cd05607 STKc_GRK7 Catalytic do 100.0 2.1E-39 4.6E-44 314.0 19.7 246 178-447 1-249 (277)
139 KOG0610|consensus 100.0 2.1E-39 4.5E-44 311.5 19.2 249 175-446 82-390 (459)
140 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.9E-39 6.2E-44 313.9 20.6 267 171-453 5-284 (284)
141 cd06646 STKc_MAP4K5 Catalytic 100.0 2.5E-39 5.4E-44 311.0 19.9 249 172-448 11-265 (267)
142 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.9E-39 1.3E-43 326.5 23.7 255 174-453 41-400 (401)
143 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-39 3.3E-44 322.4 18.8 239 176-444 1-243 (325)
144 cd05615 STKc_cPKC_alpha Cataly 100.0 3.2E-39 6.9E-44 320.0 21.0 240 173-442 3-246 (323)
145 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.7E-39 1.7E-43 308.2 22.9 252 176-450 1-268 (269)
146 cd05097 PTKc_DDR_like Catalyti 100.0 4.9E-39 1.1E-43 314.1 21.8 262 171-451 6-295 (295)
147 cd05058 PTKc_Met_Ron Catalytic 100.0 5.8E-39 1.3E-43 307.4 21.7 253 176-455 1-262 (262)
148 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.2E-38 2.5E-43 305.7 23.9 259 172-453 4-266 (267)
149 cd05603 STKc_SGK2 Catalytic do 100.0 3.1E-39 6.7E-44 319.6 20.4 238 176-443 1-242 (321)
150 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.3E-39 9.4E-44 316.4 21.1 257 172-454 20-301 (307)
151 cd05043 PTK_Ryk Pseudokinase d 100.0 5E-39 1.1E-43 311.2 21.3 257 172-454 8-278 (280)
152 cd05085 PTKc_Fer Catalytic dom 100.0 6.7E-39 1.4E-43 304.8 21.7 245 177-450 2-249 (250)
153 cd07853 STKc_NLK Catalytic dom 100.0 5.6E-39 1.2E-43 324.3 22.4 256 173-447 3-287 (372)
154 KOG0658|consensus 100.0 3.3E-40 7.1E-45 313.7 12.5 249 175-447 29-305 (364)
155 cd05055 PTKc_PDGFR Catalytic d 100.0 5.7E-39 1.2E-43 315.0 21.7 255 173-453 38-302 (302)
156 cd05053 PTKc_FGFR Catalytic do 100.0 3.1E-39 6.6E-44 314.8 19.7 256 173-454 15-293 (293)
157 KOG0196|consensus 100.0 5.4E-41 1.2E-45 342.5 7.5 279 150-455 606-894 (996)
158 cd05082 PTKc_Csk Catalytic dom 100.0 6.2E-39 1.3E-43 306.5 21.3 245 172-452 8-256 (256)
159 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.8E-39 1.5E-43 318.1 22.3 237 176-442 1-248 (327)
160 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.6E-39 1.2E-43 315.0 21.5 256 173-454 18-298 (304)
161 KOG1989|consensus 100.0 2.2E-39 4.9E-44 337.7 19.6 254 173-454 40-313 (738)
162 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-38 2.7E-43 310.1 23.6 256 172-453 8-279 (288)
163 cd06631 STKc_YSK4 Catalytic do 100.0 1E-38 2.2E-43 306.4 22.7 255 172-447 2-261 (265)
164 cd07867 STKc_CDC2L6 Catalytic 100.0 7.8E-39 1.7E-43 315.4 22.4 196 175-388 6-219 (317)
165 cd05622 STKc_ROCK1 Catalytic d 100.0 4.3E-39 9.3E-44 325.1 20.5 251 172-448 45-304 (371)
166 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-38 2.5E-43 304.4 22.3 250 176-450 1-256 (257)
167 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-38 3.4E-43 306.1 23.2 253 173-454 9-267 (270)
168 PF00069 Pkinase: Protein kina 100.0 5E-39 1.1E-43 306.8 19.5 251 172-447 1-256 (260)
169 cd05032 PTKc_InsR_like Catalyt 100.0 4.6E-39 1E-43 310.6 19.4 254 172-451 8-277 (277)
170 cd05073 PTKc_Hck Catalytic dom 100.0 9.2E-39 2E-43 306.2 21.3 252 171-452 7-260 (260)
171 cd05036 PTKc_ALK_LTK Catalytic 100.0 7.4E-39 1.6E-43 309.9 20.8 253 173-451 9-277 (277)
172 cd05089 PTKc_Tie1 Catalytic do 100.0 8.5E-39 1.8E-43 312.8 21.4 254 172-454 4-277 (297)
173 cd07876 STKc_JNK2 Catalytic do 100.0 8.7E-39 1.9E-43 321.3 21.8 255 170-447 21-314 (359)
174 cd05057 PTKc_EGFR_like Catalyt 100.0 2.5E-38 5.3E-43 306.4 24.1 255 172-454 9-270 (279)
175 cd05597 STKc_DMPK_like Catalyt 100.0 8.3E-39 1.8E-43 318.1 21.2 253 172-447 3-265 (331)
176 PRK13184 pknD serine/threonine 100.0 4.9E-39 1.1E-43 346.9 21.0 262 171-453 3-291 (932)
177 cd07861 STKc_CDK1_euk Catalyti 100.0 1.4E-38 3.1E-43 308.5 22.0 258 172-447 2-281 (285)
178 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-38 3E-43 310.5 21.9 260 171-451 6-296 (296)
179 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.6E-38 7.8E-43 302.7 24.4 256 172-447 2-263 (267)
180 cd05065 PTKc_EphR_B Catalytic 100.0 8.8E-39 1.9E-43 307.7 20.2 255 172-453 6-269 (269)
181 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2E-38 4.4E-43 310.6 23.0 262 166-447 2-285 (301)
182 cd05092 PTKc_TrkA Catalytic do 100.0 1.4E-38 3E-43 308.6 21.5 252 173-451 8-280 (280)
183 cd05110 PTKc_HER4 Catalytic do 100.0 1.1E-38 2.3E-43 313.1 21.0 254 173-454 10-270 (303)
184 cd06651 STKc_MEKK3 Catalytic d 100.0 2.9E-38 6.4E-43 303.7 23.6 252 172-447 4-260 (266)
185 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-38 4.6E-43 302.1 22.3 247 173-447 3-252 (256)
186 cd05083 PTKc_Chk Catalytic dom 100.0 1.1E-38 2.3E-43 304.5 20.2 244 172-451 8-253 (254)
187 cd05034 PTKc_Src_like Catalyti 100.0 2.1E-38 4.5E-43 303.4 22.2 251 172-452 8-261 (261)
188 cd07863 STKc_CDK4 Catalytic do 100.0 2.3E-38 5E-43 307.7 22.8 257 172-447 2-284 (288)
189 cd05627 STKc_NDR2 Catalytic do 100.0 4.6E-39 1E-43 323.5 18.5 252 172-447 3-292 (360)
190 cd05042 PTKc_Aatyk Catalytic d 100.0 2.2E-38 4.7E-43 305.0 22.2 251 177-450 2-268 (269)
191 cd06645 STKc_MAP4K3 Catalytic 100.0 1.4E-38 3E-43 305.8 20.5 247 173-447 12-264 (267)
192 cd00192 PTKc Catalytic domain 100.0 5E-38 1.1E-42 299.5 24.0 249 176-450 1-262 (262)
193 cd05047 PTKc_Tie Catalytic dom 100.0 2.5E-38 5.4E-43 305.0 22.0 249 176-453 1-269 (270)
194 PTZ00284 protein kinase; Provi 100.0 1.8E-38 4E-43 330.0 22.6 252 171-447 130-437 (467)
195 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.4E-38 7.4E-43 314.9 23.7 253 171-447 16-297 (343)
196 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-38 2.8E-43 316.7 20.6 254 172-448 3-266 (332)
197 cd05632 STKc_GRK5 Catalytic do 100.0 1.8E-38 3.8E-43 308.9 21.0 250 173-447 3-260 (285)
198 cd05095 PTKc_DDR2 Catalytic do 100.0 2.2E-38 4.8E-43 309.6 21.5 261 172-451 7-296 (296)
199 cd05586 STKc_Sck1_like Catalyt 100.0 5.4E-39 1.2E-43 319.1 17.4 241 178-447 1-252 (330)
200 cd05088 PTKc_Tie2 Catalytic do 100.0 1.3E-38 2.8E-43 312.6 19.8 253 173-454 10-282 (303)
201 cd05630 STKc_GRK6 Catalytic do 100.0 1.9E-38 4.2E-43 308.6 20.7 251 172-447 2-260 (285)
202 cd05050 PTKc_Musk Catalytic do 100.0 3.7E-38 8E-43 306.6 22.5 254 172-451 7-288 (288)
203 cd05044 PTKc_c-ros Catalytic d 100.0 2E-38 4.3E-43 304.9 20.3 250 176-451 1-269 (269)
204 cd07875 STKc_JNK1 Catalytic do 100.0 2.9E-38 6.4E-43 318.1 22.5 255 170-447 24-317 (364)
205 cd06652 STKc_MEKK2 Catalytic d 100.0 6.7E-38 1.4E-42 300.9 23.9 252 172-447 4-260 (265)
206 cd05041 PTKc_Fes_like Catalyti 100.0 3E-38 6.4E-43 300.6 21.1 247 176-450 1-250 (251)
207 KOG0577|consensus 100.0 7.2E-40 1.6E-44 325.0 10.1 240 176-447 32-277 (948)
208 cd05039 PTKc_Csk_like Catalyti 100.0 4.4E-38 9.6E-43 300.4 22.2 246 172-452 8-256 (256)
209 cd08219 STKc_Nek3 Catalytic do 100.0 3.1E-38 6.8E-43 301.3 21.2 248 172-448 2-252 (255)
210 PHA03207 serine/threonine kina 100.0 2.2E-38 4.7E-43 322.3 21.2 252 171-447 93-374 (392)
211 cd06637 STKc_TNIK Catalytic do 100.0 3.3E-38 7E-43 303.9 21.2 245 173-447 9-268 (272)
212 cd06615 PKc_MEK Catalytic doma 100.0 3.6E-38 7.8E-43 310.2 21.9 256 172-448 3-287 (308)
213 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.2E-38 7E-43 311.3 21.6 255 173-453 15-294 (314)
214 cd06644 STKc_STK10_LOK Catalyt 100.0 7.8E-38 1.7E-42 305.0 24.0 255 164-447 6-268 (292)
215 cd06624 STKc_ASK Catalytic dom 100.0 4.6E-38 1E-42 302.5 22.1 254 159-447 3-264 (268)
216 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-38 3.9E-43 318.5 19.8 254 171-447 18-310 (355)
217 KOG0033|consensus 100.0 2.6E-40 5.6E-45 297.8 5.7 248 172-447 13-266 (355)
218 cd06654 STKc_PAK1 Catalytic do 100.0 7.4E-38 1.6E-42 306.2 23.5 247 170-447 20-269 (296)
219 cd05112 PTKc_Itk Catalytic dom 100.0 4.8E-38 1E-42 300.0 21.7 247 173-450 7-256 (256)
220 cd08227 PK_STRAD_alpha Pseudok 100.0 4.5E-38 9.7E-43 312.1 22.3 258 174-447 2-306 (327)
221 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.3E-38 1.4E-42 301.2 22.5 237 176-449 1-261 (262)
222 cd06643 STKc_SLK Catalytic dom 100.0 5.3E-38 1.2E-42 304.5 22.2 247 172-447 7-261 (282)
223 PHA03211 serine/threonine kina 100.0 1.4E-38 3.1E-43 328.1 19.2 252 172-448 171-455 (461)
224 cd05086 PTKc_Aatyk2 Catalytic 100.0 8.1E-38 1.8E-42 301.2 23.3 252 177-450 2-267 (268)
225 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.4E-38 7.4E-43 313.9 21.3 257 172-454 14-295 (334)
226 cd08223 STKc_Nek4 Catalytic do 100.0 8.2E-38 1.8E-42 298.4 22.6 248 172-447 2-253 (257)
227 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-37 2.6E-42 296.9 23.8 249 172-447 2-254 (258)
228 cd05624 STKc_MRCK_beta Catalyt 100.0 2.2E-38 4.8E-43 315.0 19.4 253 172-447 3-265 (331)
229 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8.5E-38 1.8E-42 303.5 22.7 250 172-447 3-261 (286)
230 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.9E-38 1.9E-42 298.3 22.4 237 176-450 1-259 (259)
231 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.3E-38 9.4E-43 305.6 20.4 255 173-448 8-266 (284)
232 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 7.1E-38 1.5E-42 303.0 21.7 237 177-450 2-274 (274)
233 KOG1094|consensus 100.0 7.4E-39 1.6E-43 317.8 14.9 263 173-455 541-807 (807)
234 cd06619 PKc_MKK5 Catalytic dom 100.0 4.5E-38 9.8E-43 304.8 20.2 247 172-447 3-252 (279)
235 cd05580 STKc_PKA Catalytic dom 100.0 6.1E-38 1.3E-42 305.6 21.0 243 172-447 3-253 (290)
236 PHA03209 serine/threonine kina 100.0 4.4E-38 9.5E-43 316.2 20.3 186 172-385 68-256 (357)
237 cd07847 STKc_CDKL1_4 Catalytic 100.0 1E-37 2.2E-42 302.4 22.0 257 172-447 3-282 (286)
238 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.4E-37 3.1E-42 299.6 22.6 261 172-447 3-268 (272)
239 KOG4250|consensus 100.0 1.3E-38 2.8E-43 323.9 15.7 265 173-455 16-313 (732)
240 cd06607 STKc_TAO Catalytic dom 100.0 1.8E-37 3.9E-42 304.8 23.5 258 158-447 3-266 (307)
241 cd06638 STKc_myosinIIIA Cataly 100.0 9.5E-38 2.1E-42 303.0 21.2 260 155-448 9-283 (286)
242 cd08221 STKc_Nek9 Catalytic do 100.0 1.3E-37 2.8E-42 297.0 21.6 249 172-448 2-253 (256)
243 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-37 2.9E-42 298.1 21.7 256 172-447 3-263 (267)
244 KOG0584|consensus 100.0 7.4E-39 1.6E-43 321.9 13.4 245 173-447 43-295 (632)
245 cd07839 STKc_CDK5 Catalytic do 100.0 1.3E-37 2.8E-42 301.8 21.8 257 172-447 2-280 (284)
246 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.3E-38 9.4E-43 301.3 18.2 238 176-450 1-258 (258)
247 cd05046 PTK_CCK4 Pseudokinase 100.0 1.4E-37 3E-42 300.1 21.7 253 173-451 8-275 (275)
248 KOG4279|consensus 100.0 9.2E-39 2E-43 321.8 13.8 241 176-447 581-831 (1226)
249 cd06609 STKc_MST3_like Catalyt 100.0 1.8E-37 3.8E-42 299.5 22.3 245 172-447 3-250 (274)
250 KOG0579|consensus 100.0 6.5E-39 1.4E-43 320.0 12.4 256 163-447 25-288 (1187)
251 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.6E-38 2.1E-42 302.8 20.4 257 172-447 3-282 (286)
252 PTZ00266 NIMA-related protein 100.0 5.8E-38 1.3E-42 339.9 20.7 251 171-447 14-294 (1021)
253 cd06613 STKc_MAP4K3_like Catal 100.0 3.5E-37 7.7E-42 294.6 23.8 249 172-447 5-259 (262)
254 cd07860 STKc_CDK2_3 Catalytic 100.0 2.1E-37 4.5E-42 300.4 22.4 258 172-447 2-280 (284)
255 cd06611 STKc_SLK_like Catalyti 100.0 1.2E-37 2.6E-42 301.6 20.6 247 172-447 7-261 (280)
256 cd07832 STKc_CCRK Catalytic do 100.0 2.4E-37 5.2E-42 299.8 22.6 258 172-447 2-281 (286)
257 cd06612 STKc_MST1_2 Catalytic 100.0 2.4E-37 5.2E-42 294.7 22.2 245 172-447 5-252 (256)
258 cd06639 STKc_myosinIIIB Cataly 100.0 1.5E-37 3.3E-42 302.7 21.2 260 154-447 12-286 (291)
259 KOG0574|consensus 100.0 6.1E-40 1.3E-44 302.9 3.9 242 175-447 38-282 (502)
260 cd06655 STKc_PAK2 Catalytic do 100.0 5E-37 1.1E-41 300.4 24.6 246 171-447 20-268 (296)
261 cd06630 STKc_MEKK1 Catalytic d 100.0 3.6E-37 7.7E-42 295.8 23.1 257 172-447 2-263 (268)
262 cd06640 STKc_MST4 Catalytic do 100.0 2.5E-37 5.5E-42 299.1 22.0 245 172-448 6-253 (277)
263 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.3E-37 2.8E-42 301.0 19.8 241 175-447 9-252 (277)
264 cd07841 STKc_CDK7 Catalytic do 100.0 4.3E-37 9.4E-42 300.4 23.4 260 172-447 2-281 (298)
265 KOG0690|consensus 100.0 9.6E-39 2.1E-43 297.8 10.9 236 175-440 173-411 (516)
266 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.2E-37 2.6E-42 301.4 19.1 265 172-452 6-283 (284)
267 cd06656 STKc_PAK3 Catalytic do 100.0 2.8E-37 6.2E-42 302.2 21.7 246 171-447 20-268 (297)
268 cd08528 STKc_Nek10 Catalytic d 100.0 3.2E-37 7E-42 296.6 21.7 262 172-451 2-269 (269)
269 cd08217 STKc_Nek2 Catalytic do 100.0 2.5E-37 5.5E-42 295.4 20.8 249 172-447 2-261 (265)
270 cd05574 STKc_phototropin_like 100.0 3.4E-37 7.4E-42 303.9 22.1 253 172-447 3-288 (316)
271 cd06659 STKc_PAK6 Catalytic do 100.0 5.1E-37 1.1E-41 300.5 22.5 246 171-447 22-270 (297)
272 cd05609 STKc_MAST Catalytic do 100.0 2.9E-37 6.2E-42 303.2 20.7 256 172-451 3-273 (305)
273 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.8E-37 8.2E-42 298.4 21.3 245 173-447 19-278 (282)
274 cd07844 STKc_PCTAIRE_like Cata 100.0 9E-37 2E-41 297.1 23.7 259 169-447 4-287 (291)
275 cd06626 STKc_MEKK4 Catalytic d 100.0 8.3E-37 1.8E-41 292.4 23.0 251 172-447 2-260 (264)
276 cd07849 STKc_ERK1_2_like Catal 100.0 4.1E-37 9E-42 306.3 21.6 259 171-448 6-292 (336)
277 KOG4257|consensus 100.0 1E-37 2.2E-42 311.4 17.0 252 173-453 392-650 (974)
278 cd07836 STKc_Pho85 Catalytic d 100.0 8.5E-37 1.8E-41 295.9 23.0 257 172-447 2-280 (284)
279 cd07835 STKc_CDK1_like Catalyt 100.0 7.9E-37 1.7E-41 296.1 22.8 256 173-447 2-279 (283)
280 cd06917 STKc_NAK1_like Catalyt 100.0 4.8E-37 1E-41 296.7 21.0 245 172-447 3-254 (277)
281 KOG4717|consensus 100.0 9.8E-38 2.1E-42 305.7 16.0 245 172-447 20-269 (864)
282 cd08218 STKc_Nek1 Catalytic do 100.0 5.8E-37 1.3E-41 292.5 21.0 248 172-447 2-252 (256)
283 cd05074 PTKc_Tyro3 Catalytic d 100.0 1E-36 2.2E-41 293.6 22.9 256 173-453 2-273 (273)
284 KOG0199|consensus 100.0 5.3E-38 1.2E-42 316.9 14.4 246 176-447 116-367 (1039)
285 cd06617 PKc_MKK3_6 Catalytic d 100.0 3E-37 6.6E-42 298.8 19.3 247 173-447 4-260 (283)
286 smart00219 TyrKc Tyrosine kina 100.0 6E-37 1.3E-41 291.9 20.8 248 174-449 3-258 (258)
287 cd06635 STKc_TAO1 Catalytic do 100.0 1.6E-36 3.6E-41 299.6 24.5 246 172-449 27-278 (317)
288 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.5E-36 3.2E-41 291.6 23.3 252 172-447 4-260 (264)
289 KOG4645|consensus 100.0 6.8E-39 1.5E-43 342.3 7.4 247 173-447 1238-1493(1509)
290 cd06608 STKc_myosinIII_like Ca 100.0 5.8E-37 1.3E-41 294.8 20.2 248 172-447 8-271 (275)
291 cd08220 STKc_Nek8 Catalytic do 100.0 1.2E-36 2.6E-41 289.9 22.2 247 172-447 2-252 (256)
292 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.5E-36 3.3E-41 295.7 23.2 257 171-447 6-287 (291)
293 cd06658 STKc_PAK5 Catalytic do 100.0 7E-37 1.5E-41 298.8 20.7 242 176-448 28-272 (292)
294 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-36 2.5E-41 296.8 21.9 256 173-447 8-289 (293)
295 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.6E-37 2.1E-41 296.7 21.3 252 174-447 5-265 (287)
296 cd05633 STKc_GRK3 Catalytic do 100.0 9.5E-37 2.1E-41 295.8 21.2 242 177-447 1-254 (279)
297 cd07833 STKc_CDKL Catalytic do 100.0 9.2E-37 2E-41 296.0 21.1 258 172-447 3-284 (288)
298 cd07837 STKc_CdkB_plant Cataly 100.0 1.3E-36 2.8E-41 296.4 22.2 259 172-447 3-290 (295)
299 KOG0667|consensus 100.0 2.7E-37 5.9E-42 313.1 17.5 253 171-447 187-501 (586)
300 cd05579 STKc_MAST_like Catalyt 100.0 7.7E-37 1.7E-41 292.1 19.7 248 178-450 1-256 (265)
301 cd06641 STKc_MST3 Catalytic do 100.0 2.2E-36 4.8E-41 292.5 23.0 244 172-447 6-252 (277)
302 cd05606 STKc_beta_ARK Catalyti 100.0 2.5E-36 5.4E-41 292.7 23.3 242 177-447 1-254 (278)
303 cd05572 STKc_cGK_PKG Catalytic 100.0 1.6E-36 3.6E-41 290.6 21.7 241 178-447 1-251 (262)
304 cd05578 STKc_Yank1 Catalytic d 100.0 5.8E-37 1.3E-41 293.0 18.5 247 172-446 2-253 (258)
305 cd07865 STKc_CDK9 Catalytic do 100.0 2E-36 4.3E-41 296.8 22.6 260 172-447 14-306 (310)
306 KOG4278|consensus 100.0 1.9E-37 4.1E-42 309.1 15.3 251 174-454 271-525 (1157)
307 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-36 4.9E-41 297.2 22.8 257 172-447 9-289 (309)
308 cd07842 STKc_CDK8_like Catalyt 100.0 1E-36 2.2E-41 299.9 19.7 263 172-447 2-312 (316)
309 cd07831 STKc_MOK Catalytic dom 100.0 3.8E-36 8.3E-41 290.8 23.1 254 172-447 1-278 (282)
310 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-36 3.3E-41 302.0 20.8 259 172-447 7-293 (334)
311 cd05577 STKc_GRK Catalytic dom 100.0 2.6E-36 5.6E-41 292.0 21.5 245 178-447 1-253 (277)
312 cd08225 STKc_Nek5 Catalytic do 100.0 2.8E-36 6E-41 287.6 20.8 248 172-447 2-253 (257)
313 cd05611 STKc_Rim15_like Cataly 100.0 2.5E-36 5.5E-41 288.9 20.5 244 176-449 2-249 (260)
314 KOG0586|consensus 100.0 4.4E-37 9.5E-42 308.8 15.7 250 166-447 52-305 (596)
315 cd07864 STKc_CDK12 Catalytic d 100.0 4.9E-36 1.1E-40 293.3 22.6 257 173-447 10-298 (302)
316 cd06616 PKc_MKK4 Catalytic dom 100.0 2.6E-36 5.6E-41 293.4 20.2 248 176-447 10-266 (288)
317 cd08226 PK_STRAD_beta Pseudoki 100.0 5.1E-36 1.1E-40 297.5 22.6 258 176-447 4-307 (328)
318 cd06648 STKc_PAK_II Catalytic 100.0 6.7E-36 1.4E-40 290.7 22.9 241 176-447 25-268 (285)
319 cd06605 PKc_MAPKK Catalytic do 100.0 2.1E-36 4.6E-41 289.9 19.1 247 173-447 4-256 (265)
320 cd06647 STKc_PAK_I Catalytic d 100.0 5.2E-36 1.1E-40 292.7 22.0 245 172-447 21-268 (293)
321 KOG0986|consensus 100.0 1.2E-37 2.6E-42 301.7 9.9 255 153-441 173-434 (591)
322 cd07834 STKc_MAPK Catalytic do 100.0 7.2E-36 1.6E-40 296.3 22.8 259 172-447 2-288 (330)
323 KOG0983|consensus 100.0 6.3E-37 1.4E-41 279.9 13.8 244 176-447 98-348 (391)
324 cd07850 STKc_JNK Catalytic dom 100.0 4.4E-36 9.6E-41 301.0 21.4 254 171-447 17-310 (353)
325 cd06633 STKc_TAO3 Catalytic do 100.0 8.7E-36 1.9E-40 294.0 22.8 241 175-447 26-272 (313)
326 cd06614 STKc_PAK Catalytic dom 100.0 1.4E-35 3E-40 288.2 23.9 247 171-447 20-269 (286)
327 cd07866 STKc_BUR1 Catalytic do 100.0 6.7E-36 1.5E-40 293.2 21.9 260 172-447 10-307 (311)
328 cd05581 STKc_PDK1 Catalytic do 100.0 4.9E-36 1.1E-40 289.3 20.5 249 172-447 3-276 (280)
329 KOG0596|consensus 100.0 6.8E-37 1.5E-41 302.8 14.6 249 171-447 362-626 (677)
330 cd07840 STKc_CDK9_like Catalyt 100.0 6.7E-36 1.5E-40 289.4 21.4 257 173-447 2-283 (287)
331 PLN00009 cyclin-dependent kina 100.0 6.2E-36 1.3E-40 291.8 21.0 258 172-447 4-283 (294)
332 cd06623 PKc_MAPKK_plant_like C 100.0 7.3E-36 1.6E-40 285.6 21.0 250 173-448 4-256 (264)
333 cd07830 STKc_MAK_like Catalyti 100.0 1.3E-35 2.8E-40 287.4 22.6 255 172-447 1-279 (283)
334 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-35 2.9E-40 292.1 23.1 259 174-447 6-294 (314)
335 cd05613 STKc_MSK1_N N-terminal 100.0 9.5E-36 2.1E-40 289.9 21.7 252 172-447 2-267 (290)
336 cd05118 STKc_CMGC Catalytic do 100.0 1.2E-35 2.7E-40 287.2 22.2 256 173-447 2-279 (283)
337 cd05122 PKc_STE Catalytic doma 100.0 1.7E-35 3.8E-40 280.0 22.5 246 172-447 2-250 (253)
338 cd07858 STKc_TEY_MAPK_plant Ca 100.0 7.9E-36 1.7E-40 297.3 21.1 258 171-448 6-291 (337)
339 cd05583 STKc_MSK_N N-terminal 100.0 6.9E-36 1.5E-40 290.6 19.8 256 172-451 2-266 (288)
340 PLN00113 leucine-rich repeat r 100.0 1.3E-35 2.9E-40 334.5 25.2 248 176-454 696-953 (968)
341 cd07852 STKc_MAPK15 Catalytic 100.0 1.1E-35 2.3E-40 296.2 21.4 257 172-447 9-294 (337)
342 PHA02882 putative serine/threo 100.0 1.1E-35 2.4E-40 290.6 21.1 266 171-450 13-294 (294)
343 PTZ00024 cyclin-dependent prot 100.0 1.7E-35 3.6E-40 294.5 22.6 269 173-447 12-312 (335)
344 cd06634 STKc_TAO2 Catalytic do 100.0 1.1E-35 2.4E-40 292.5 21.1 241 176-448 21-267 (308)
345 cd06618 PKc_MKK7 Catalytic dom 100.0 9.3E-36 2E-40 291.1 20.4 246 173-447 18-272 (296)
346 KOG3653|consensus 100.0 2.6E-36 5.6E-41 294.2 16.2 257 175-453 215-504 (534)
347 cd06606 STKc_MAPKKK Catalytic 100.0 1.6E-35 3.5E-40 281.4 21.3 250 172-447 2-256 (260)
348 cd08530 STKc_CNK2-like Catalyt 100.0 8E-36 1.7E-40 284.0 19.1 247 172-447 2-252 (256)
349 cd06627 STKc_Cdc7_like Catalyt 100.0 1.8E-35 3.9E-40 281.1 21.0 246 172-447 2-250 (254)
350 cd07879 STKc_p38delta_MAPK13 C 100.0 1.8E-35 3.9E-40 295.3 21.6 251 172-447 17-296 (342)
351 cd06657 STKc_PAK4 Catalytic do 100.0 1.9E-35 4E-40 288.8 21.0 241 176-447 26-269 (292)
352 cd05123 STKc_AGC Catalytic dom 100.0 3E-35 6.4E-40 279.3 21.8 237 178-444 1-240 (250)
353 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.1E-35 6.7E-40 293.7 22.9 258 170-447 5-299 (342)
354 cd08222 STKc_Nek11 Catalytic d 100.0 4.1E-35 8.8E-40 280.6 22.8 251 172-447 2-256 (260)
355 KOG0696|consensus 100.0 2.6E-36 5.7E-41 289.0 14.2 235 176-440 355-593 (683)
356 cd08215 STKc_Nek Catalytic dom 100.0 4.9E-35 1.1E-39 278.2 22.7 249 172-447 2-254 (258)
357 cd07838 STKc_CDK4_6_like Catal 100.0 4.1E-35 8.9E-40 284.1 22.4 257 172-447 1-283 (287)
358 PHA03210 serine/threonine kina 100.0 8.7E-36 1.9E-40 312.0 18.6 272 171-447 149-453 (501)
359 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.1E-35 6.8E-40 293.8 21.7 252 172-447 17-297 (343)
360 PHA03390 pk1 serine/threonine- 100.0 5.2E-35 1.1E-39 281.8 22.1 232 178-447 24-261 (267)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.7E-35 8E-40 291.5 21.2 252 172-447 12-287 (328)
362 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.7E-35 1E-39 292.7 22.0 260 158-447 11-299 (345)
363 cd07851 STKc_p38 Catalytic dom 100.0 2.7E-35 5.8E-40 294.3 19.5 252 172-447 17-297 (343)
364 KOG2052|consensus 100.0 2.2E-35 4.7E-40 285.8 18.0 259 174-453 215-504 (513)
365 cd07829 STKc_CDK_like Catalyti 100.0 1E-34 2.3E-39 280.6 22.2 256 173-447 2-278 (282)
366 cd07857 STKc_MPK1 Catalytic do 100.0 8E-35 1.7E-39 289.4 21.2 259 172-447 2-291 (332)
367 KOG0666|consensus 100.0 4.2E-36 9E-41 278.9 10.5 203 172-388 26-243 (438)
368 KOG1006|consensus 100.0 1.3E-36 2.8E-41 276.9 6.8 262 150-447 57-326 (361)
369 KOG0607|consensus 100.0 3.7E-35 8E-40 273.4 15.8 259 152-447 71-360 (463)
370 KOG0662|consensus 100.0 7.3E-35 1.6E-39 251.5 15.4 253 176-447 8-282 (292)
371 KOG1151|consensus 100.0 5.2E-36 1.1E-40 289.1 8.3 281 151-446 436-739 (775)
372 cd05610 STKc_MASTL Catalytic d 100.0 2.6E-34 5.7E-39 310.1 21.3 145 172-331 6-152 (669)
373 KOG1035|consensus 100.0 3.9E-35 8.4E-40 312.3 14.1 252 160-447 475-870 (1351)
374 KOG0612|consensus 100.0 2.5E-35 5.4E-40 311.5 12.1 246 173-446 78-336 (1317)
375 KOG0614|consensus 100.0 1.3E-35 2.9E-40 290.5 9.2 239 174-441 424-665 (732)
376 KOG0604|consensus 100.0 5.7E-35 1.2E-39 270.1 12.2 239 176-447 68-321 (400)
377 KOG1025|consensus 100.0 7.8E-35 1.7E-39 298.5 14.4 252 175-454 701-959 (1177)
378 cd05576 STKc_RPK118_like Catal 100.0 5.5E-34 1.2E-38 269.7 18.6 218 181-443 4-224 (237)
379 KOG0669|consensus 100.0 1.2E-35 2.6E-40 268.7 5.0 259 173-447 20-314 (376)
380 KOG0200|consensus 100.0 1.3E-33 2.7E-38 300.8 19.8 253 174-453 300-580 (609)
381 PLN03225 Serine/threonine-prot 100.0 4.4E-33 9.6E-38 294.0 21.5 256 170-447 132-449 (566)
382 KOG4236|consensus 100.0 1.7E-34 3.8E-39 283.5 9.4 243 176-447 570-818 (888)
383 KOG0603|consensus 100.0 2.2E-33 4.8E-38 283.5 16.0 234 171-447 323-562 (612)
384 KOG0587|consensus 100.0 4.3E-33 9.3E-38 288.6 17.0 249 170-447 19-281 (953)
385 smart00220 S_TKc Serine/Threon 100.0 9.3E-32 2E-36 252.5 22.3 236 182-447 1-240 (244)
386 PLN03224 probable serine/threo 100.0 7.6E-32 1.6E-36 278.6 19.8 273 171-447 146-499 (507)
387 KOG0671|consensus 100.0 9.7E-33 2.1E-37 263.3 11.9 254 169-447 88-405 (415)
388 KOG0695|consensus 100.0 5.4E-32 1.2E-36 253.5 13.9 238 173-440 253-502 (593)
389 KOG0608|consensus 100.0 3.7E-32 8E-37 272.1 13.2 204 173-391 632-877 (1034)
390 cd08308 Death_Tube Death domai 100.0 3.7E-32 8E-37 222.4 9.6 117 10-128 1-120 (125)
391 KOG1027|consensus 100.0 1.7E-32 3.7E-37 283.0 8.3 241 176-447 515-766 (903)
392 KOG0984|consensus 100.0 1.4E-31 3.1E-36 235.9 11.3 197 176-390 52-257 (282)
393 KOG0664|consensus 100.0 7E-32 1.5E-36 246.7 5.5 254 176-448 59-343 (449)
394 KOG1024|consensus 100.0 9.5E-31 2E-35 249.7 12.8 254 173-452 287-555 (563)
395 KOG0576|consensus 100.0 2.2E-31 4.7E-36 268.6 6.8 253 167-447 12-270 (829)
396 cd00180 PKc Catalytic domain o 100.0 5.2E-29 1.1E-33 227.8 21.0 209 178-448 1-214 (215)
397 KOG1152|consensus 100.0 8.4E-31 1.8E-35 260.5 9.2 201 172-387 563-771 (772)
398 KOG0670|consensus 100.0 8.5E-30 1.8E-34 250.5 11.5 254 172-447 434-745 (752)
399 KOG0668|consensus 100.0 3E-29 6.6E-34 224.3 12.5 258 162-447 30-321 (338)
400 cd08793 Death_IRAK4 Death doma 100.0 3.3E-29 7.2E-34 196.6 8.6 98 11-117 1-98 (100)
401 smart00221 STYKc Protein kinas 100.0 1.4E-27 3E-32 222.2 20.2 197 173-387 2-202 (225)
402 KOG0665|consensus 100.0 8.5E-29 1.9E-33 231.4 11.4 254 170-447 17-309 (369)
403 KOG1290|consensus 100.0 1.5E-27 3.2E-32 233.6 19.8 130 170-316 78-221 (590)
404 KOG1167|consensus 100.0 4E-28 8.6E-33 234.6 11.6 253 172-447 38-380 (418)
405 KOG1345|consensus 99.9 9.8E-28 2.1E-32 219.5 10.7 242 173-449 27-285 (378)
406 PLN00181 protein SPA1-RELATED; 99.9 6.3E-27 1.4E-31 258.2 12.5 197 233-447 26-264 (793)
407 smart00750 KIND kinase non-cat 99.9 1.1E-25 2.5E-30 202.6 15.5 167 263-453 1-170 (176)
408 cd08307 Death_Pelle Death doma 99.9 1.3E-25 2.8E-30 177.9 8.6 90 11-115 1-90 (97)
409 PRK09188 serine/threonine prot 99.9 4E-25 8.6E-30 219.7 13.9 166 172-360 20-194 (365)
410 KOG1165|consensus 99.9 3.3E-24 7.2E-29 201.5 18.4 257 169-454 27-301 (449)
411 KOG1164|consensus 99.9 1.4E-23 3E-28 207.9 21.2 258 171-453 19-298 (322)
412 KOG0195|consensus 99.9 5.7E-25 1.2E-29 201.5 8.3 247 176-453 196-447 (448)
413 COG0515 SPS1 Serine/threonine 99.9 5.9E-23 1.3E-27 199.2 22.0 258 172-447 2-274 (384)
414 KOG1163|consensus 99.9 1.8E-23 3.8E-28 188.8 14.9 255 171-452 16-284 (341)
415 cd08309 Death_IRAK Death domai 99.9 5.7E-24 1.2E-28 170.3 9.1 92 11-111 1-94 (95)
416 cd08795 Death_IRAK2 Death doma 99.9 4.8E-24 1E-28 163.8 8.1 84 12-111 2-87 (88)
417 KOG0590|consensus 99.9 7E-24 1.5E-28 223.9 7.9 260 171-447 319-584 (601)
418 cd05147 RIO1_euk RIO kinase fa 99.9 8.2E-23 1.8E-27 186.7 13.6 152 175-333 2-167 (190)
419 cd08796 Death_IRAK-M Death dom 99.9 3.1E-23 6.8E-28 160.9 8.1 85 11-111 1-88 (89)
420 PF14786 Death_2: Tube Death d 99.9 2.6E-23 5.6E-28 169.9 6.2 118 8-128 2-132 (137)
421 KOG1240|consensus 99.9 5.7E-23 1.2E-27 217.8 6.4 246 175-448 28-291 (1431)
422 cd05145 RIO1_like RIO kinase f 99.9 2.7E-21 5.9E-26 176.9 13.7 155 175-335 2-169 (190)
423 PRK12274 serine/threonine prot 99.9 2.1E-21 4.5E-26 176.8 11.6 190 175-389 7-211 (218)
424 PF14531 Kinase-like: Kinase-l 99.8 6.7E-21 1.5E-25 182.1 12.6 232 173-439 15-288 (288)
425 PRK10359 lipopolysaccharide co 99.8 1.8E-21 3.8E-26 180.8 7.9 176 171-379 32-216 (232)
426 KOG0603|consensus 99.8 3.7E-22 8.1E-27 202.4 3.2 226 177-442 1-232 (612)
427 cd08794 Death_IRAK1 Death doma 99.8 8E-21 1.7E-25 140.3 7.3 81 11-111 1-83 (84)
428 KOG1023|consensus 99.8 3.7E-20 8.1E-25 187.7 10.2 211 233-454 1-226 (484)
429 smart00090 RIO RIO-like kinase 99.8 8.5E-20 1.8E-24 172.5 11.7 156 170-334 28-199 (237)
430 KOG1166|consensus 99.8 2.5E-19 5.5E-24 193.5 14.8 188 173-383 701-901 (974)
431 PRK10345 hypothetical protein; 99.8 5.6E-19 1.2E-23 163.3 12.6 130 176-328 8-154 (210)
432 PRK14879 serine/threonine prot 99.8 6.6E-19 1.4E-23 163.4 12.9 141 176-332 2-143 (211)
433 cd05144 RIO2_C RIO kinase fami 99.8 7.5E-19 1.6E-23 161.8 13.0 149 172-334 17-176 (198)
434 TIGR03724 arch_bud32 Kae1-asso 99.8 3.1E-18 6.7E-23 157.5 12.9 137 177-332 1-138 (199)
435 KOG4158|consensus 99.8 2.8E-18 6.1E-23 165.1 12.6 196 237-449 274-511 (598)
436 PRK09605 bifunctional UGMP fam 99.8 5.3E-18 1.1E-22 179.2 14.1 141 173-333 336-477 (535)
437 KOG0606|consensus 99.7 3.6E-18 7.8E-23 181.5 7.7 202 176-440 89-304 (1205)
438 PRK01723 3-deoxy-D-manno-octul 99.7 1.9E-16 4.1E-21 149.9 11.8 147 176-333 37-192 (239)
439 cd05119 RIO RIO kinase family, 99.7 3.2E-16 7E-21 142.5 12.5 151 175-335 2-166 (187)
440 KOG1033|consensus 99.7 1.3E-17 2.7E-22 166.7 3.0 172 252-445 330-509 (516)
441 cd05120 APH_ChoK_like Aminogly 99.6 1E-15 2.2E-20 132.9 11.6 133 175-333 3-139 (155)
442 KOG0590|consensus 99.6 4.1E-17 8.9E-22 172.7 1.0 254 172-446 22-284 (601)
443 TIGR01982 UbiB 2-polyprenylphe 99.6 6.3E-15 1.4E-19 151.3 12.3 153 176-335 123-309 (437)
444 PRK04750 ubiB putative ubiquin 99.4 3.2E-13 7E-18 140.6 10.2 151 176-335 125-316 (537)
445 cd05151 ChoK Choline Kinase (C 99.4 4.3E-13 9.3E-18 119.7 9.7 127 176-332 4-136 (170)
446 KOG0601|consensus 99.4 2.8E-13 6.1E-18 138.0 9.2 245 176-447 120-378 (524)
447 KOG1266|consensus 99.4 3.8E-13 8.2E-18 127.3 9.1 200 231-446 119-329 (458)
448 cd05146 RIO3_euk RIO kinase fa 99.3 1.2E-11 2.6E-16 112.7 13.1 149 176-334 3-175 (197)
449 cd08781 Death_UNC5-like Death 99.3 1.3E-11 2.9E-16 96.1 7.6 78 16-111 1-82 (83)
450 cd05154 ACAD10_11_like Acyl-Co 99.3 5.1E-11 1.1E-15 110.8 12.6 142 176-333 4-207 (223)
451 COG4248 Uncharacterized protei 99.2 3.8E-10 8.2E-15 110.6 16.9 256 174-453 15-301 (637)
452 KOG3087|consensus 99.2 2.6E-10 5.7E-15 100.5 12.8 151 176-335 13-168 (229)
453 COG3642 Mn2+-dependent serine/ 99.2 3.4E-10 7.5E-15 100.2 12.5 140 176-334 2-142 (204)
454 KOG1243|consensus 99.1 6.4E-10 1.4E-14 114.9 14.7 167 189-381 31-199 (690)
455 KOG0606|consensus 99.1 4.1E-11 8.9E-16 128.5 4.7 247 173-443 807-1084(1205)
456 cd08783 Death_MALT1 Death doma 99.1 3.8E-10 8.3E-15 87.0 8.4 91 14-113 2-95 (97)
457 PF01163 RIO1: RIO1 family; I 99.1 1.1E-09 2.4E-14 99.3 11.8 139 185-334 1-157 (188)
458 KOG0601|consensus 99.1 1.7E-10 3.6E-15 117.9 5.7 236 176-448 271-514 (524)
459 COG0478 RIO-like serine/threon 99.0 2.5E-09 5.4E-14 100.2 11.4 148 172-332 93-251 (304)
460 KOG3741|consensus 99.0 3.4E-08 7.3E-13 99.5 18.4 167 183-383 289-474 (655)
461 cd08782 Death_DAPK1 Death doma 99.0 1.7E-09 3.6E-14 83.8 7.1 76 20-111 2-81 (82)
462 PRK15123 lipopolysaccharide co 98.9 1.1E-08 2.5E-13 98.1 13.3 150 177-332 29-194 (268)
463 cd08312 Death_MyD88 Death doma 98.9 3.1E-09 6.8E-14 82.0 7.1 70 20-107 1-74 (79)
464 PF06293 Kdo: Lipopolysacchari 98.8 9.8E-08 2.1E-12 88.3 12.3 107 223-334 55-172 (206)
465 COG0661 AarF Predicted unusual 98.7 5.1E-08 1.1E-12 101.3 10.5 163 159-335 121-317 (517)
466 KOG2137|consensus 98.7 3.9E-09 8.4E-14 109.6 2.0 150 289-447 107-264 (700)
467 PRK09902 hypothetical protein; 98.7 3E-07 6.4E-12 84.3 13.0 143 178-332 26-179 (216)
468 cd08799 Death_UNC5C Death doma 98.7 9.1E-08 2E-12 73.9 7.6 74 16-107 1-78 (84)
469 cd08310 Death_NFkB-like Death 98.7 7.8E-08 1.7E-12 72.6 6.7 71 20-111 1-71 (72)
470 cd08802 Death_UNC5B Death doma 98.6 1.2E-07 2.6E-12 73.0 7.7 75 16-108 1-79 (84)
471 KOG1235|consensus 98.5 8.5E-07 1.9E-11 92.0 11.7 162 160-335 158-357 (538)
472 cd08800 Death_UNC5A Death doma 98.4 9.6E-07 2.1E-11 67.7 7.8 75 16-108 1-79 (84)
473 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 2.4E-06 5.1E-11 80.3 12.0 139 176-333 7-183 (226)
474 COG1718 RIO1 Serine/threonine 98.4 2.9E-06 6.3E-11 79.0 11.2 155 171-334 49-217 (268)
475 COG2112 Predicted Ser/Thr prot 98.3 4.6E-06 9.9E-11 73.7 8.8 130 174-334 26-157 (201)
476 PF06176 WaaY: Lipopolysacchar 98.2 4.9E-06 1.1E-10 76.7 8.5 138 176-332 37-183 (229)
477 cd08801 Death_UNC5D Death doma 98.2 6E-06 1.3E-10 63.6 7.5 70 16-103 1-74 (98)
478 PF01636 APH: Phosphotransfera 98.2 1E-05 2.2E-10 75.4 9.8 141 176-332 3-197 (239)
479 cd05150 APH Aminoglycoside 3'- 98.2 1.8E-05 4E-10 74.9 11.5 139 177-332 5-193 (244)
480 PLN02876 acyl-CoA dehydrogenas 98.2 1.8E-05 3.8E-10 88.3 12.8 147 176-334 44-259 (822)
481 PF12260 PIP49_C: Protein-kina 98.1 1.4E-05 3E-10 72.8 8.0 105 226-333 6-112 (188)
482 cd05155 APH_ChoK_like_1 Unchar 98.0 3.6E-05 7.8E-10 72.6 10.9 31 302-332 164-194 (235)
483 PRK10593 hypothetical protein; 97.9 0.0002 4.3E-09 70.1 13.0 74 176-265 20-100 (297)
484 PF13095 FTA2: Kinetochore Sim 97.8 0.00015 3.2E-09 66.2 10.6 132 175-330 42-206 (207)
485 KOG2268|consensus 97.8 2E-05 4.3E-10 76.0 4.7 147 171-331 93-250 (465)
486 smart00005 DEATH DEATH domain, 97.8 5E-05 1.1E-09 60.0 6.0 81 19-111 3-85 (88)
487 KOG0576|consensus 97.8 5.1E-06 1.1E-10 86.1 0.2 181 176-387 248-432 (829)
488 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00043 9.3E-09 63.4 12.1 138 176-326 7-165 (199)
489 cd05157 ETNK_euk Ethanolamine 97.7 0.00026 5.7E-09 66.5 11.0 73 176-265 4-79 (235)
490 PF00531 Death: Death domain; 97.7 3.9E-05 8.4E-10 59.8 3.5 76 23-111 2-79 (83)
491 TIGR02721 ycfN_thiK thiamine k 97.6 0.00035 7.5E-09 66.8 10.1 138 177-332 3-175 (256)
492 TIGR00938 thrB_alt homoserine 97.6 0.0012 2.7E-08 64.8 13.7 161 155-332 8-217 (307)
493 PRK05231 homoserine kinase; Pr 97.6 0.0012 2.7E-08 65.1 13.6 32 301-332 186-217 (319)
494 cd05152 MPH2' Macrolide 2'-Pho 97.5 0.00065 1.4E-08 65.8 9.8 32 302-333 185-217 (276)
495 PRK09550 mtnK methylthioribose 97.5 0.0011 2.3E-08 67.4 11.3 82 176-264 32-117 (401)
496 cd05153 HomoserineK_II Homoser 97.4 0.0017 3.7E-08 63.3 12.2 140 176-332 20-205 (296)
497 cd08797 Death_NFkB1_p105 Death 97.4 0.00062 1.3E-08 51.4 6.7 71 20-111 1-74 (76)
498 cd01670 Death Death Domain: a 97.4 0.00036 7.9E-09 53.8 5.6 72 21-107 2-73 (79)
499 KOG1035|consensus 97.3 0.00083 1.8E-08 74.5 9.4 195 224-448 227-434 (1351)
500 cd05156 ChoK_euk Choline Kinas 97.3 0.0013 2.8E-08 64.4 9.7 140 176-332 4-213 (302)
No 1
>KOG1187|consensus
Probab=100.00 E-value=1.8e-53 Score=424.51 Aligned_cols=281 Identities=40% Similarity=0.638 Sum_probs=231.5
Q ss_pred cceeeeHHHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHH
Q psy520 150 ELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENE 229 (455)
Q Consensus 150 ~~~~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 229 (455)
....|++.+|..+|++|+.. ++||+|+||.||+|...+|+.||||++....... ...|.+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~------~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------~~eF~~E 121 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSES------NLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------EREFLNE 121 (361)
T ss_pred CcceeeHHHHHHHHhCCchh------cceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------hhHHHHH
Confidence 56789999999999999998 9999999999999999988999999886433210 1239999
Q ss_pred HHHHHcCCCcceecccccccC-c-ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCeEe
Q psy520 230 VQTLSQCKHVNLLRLLGFCNN-I-MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-SKPIIH 306 (455)
Q Consensus 230 ~~~l~~l~h~niv~l~~~~~~-~-~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~-~~~iiH 306 (455)
+.++.+++|||+|+++|||.+ + ..+||||||++|||.++|+..... +++|.+|.+||.++|+||+|||+. ...|||
T Consensus 122 i~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiH 200 (361)
T KOG1187|consen 122 VEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIH 200 (361)
T ss_pred HHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEec
Confidence 999999999999999999998 5 489999999999999999986544 899999999999999999999995 347999
Q ss_pred cCCCCCcEEECCCCceEEccccccccccC-CCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCC
Q psy520 307 RDVKSANVLLDENFVPKLGDFGIVKMSET-SNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKP 384 (455)
Q Consensus 307 ~Dikp~NILl~~~~~~kl~DFGla~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p 384 (455)
|||||+|||||+++.+||+|||+|+..+. .. ...+.. .||.+|+|||+. .|..+.|+||||||||++|++||+.|
T Consensus 201 rDiKssNILLD~~~~aKlsDFGLa~~~~~~~~--~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~ 277 (361)
T KOG1187|consen 201 RDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT--SVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKA 277 (361)
T ss_pred CCCCHHHeeECCCCCEEccCccCcccCCcccc--ceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcc
Confidence 99999999999999999999999976654 21 111111 899999999966 57899999999999999999999999
Q ss_pred CCCCc----hhhHHH-HHHhcccchhhhcchhhc--CCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 385 IDDNN----TILYYY-LVVEQEVPVREVLDKEAG--EWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 385 ~~~~~----~~~~~~-~~~~~~~~~~~~~d~~~~--~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.+... ..+..+ ........+.+++|+.+. ..+.......+..+...|+..+|+.||+|.||++.|+.+.
T Consensus 278 ~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 278 VDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred cCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 98643 212332 233345588999999974 3332123333556677899999999999999999997654
No 2
>KOG0192|consensus
Probab=100.00 E-value=2.3e-48 Score=385.66 Aligned_cols=251 Identities=34% Similarity=0.536 Sum_probs=206.1
Q ss_pred CcccccCCEEEEEEEEcCCcE-EEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCc--c
Q psy520 176 NKLGEGQFGTVYYGKLKNGME-IAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNI--M 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~-vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 252 (455)
+.||+|+||+||+|.++ |+. ||||++........ . ...|.+|+.+|++++|||||+++|+|.+. .
T Consensus 47 ~~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~-------~----~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDE-------S----RKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred hhcccCCceeEEEEEeC-CceeEEEEEecchhcChH-------H----HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 66999999999999998 566 99999975432111 0 55699999999999999999999999884 5
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-eEecCCCCCcEEECCCC-ceEEcccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-IIHRDVKSANVLLDENF-VPKLGDFGIV 330 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~-iiH~Dikp~NILl~~~~-~~kl~DFGla 330 (455)
.|+|||||++|+|.++++.. ....+++..++.++.+||+|+.|||+ ++ ||||||||+|||++.++ ++||+|||++
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~--~~~iIHrDLK~~NiLv~~~~~~~KI~DFGls 191 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS--EGPIIHRDLKSDNILVDLKGKTLKIADFGLS 191 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc--CCCeeecccChhhEEEcCCCCEEEECCCccc
Confidence 89999999999999999885 34579999999999999999999999 77 99999999999999998 9999999999
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccCC---CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHCQ---ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+...... .......||..|||||++.+. ++.|+||||||||+|||+||..||..................
T Consensus 192 r~~~~~~---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~R---- 264 (362)
T KOG0192|consen 192 REKVISK---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLR---- 264 (362)
T ss_pred eeecccc---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC----
Confidence 8765432 112236899999999998854 899999999999999999999999988753333322211111
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
...+..++..+..|+.+||..||.+||++.+++..|+.+..
T Consensus 265 ------p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 265 ------PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred ------CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 01111255568888999999999999999999999987753
No 3
>KOG0575|consensus
Probab=100.00 E-value=1.4e-48 Score=391.18 Aligned_cols=248 Identities=28% Similarity=0.420 Sum_probs=215.0
Q ss_pred CCCcCCCcccccCCEEEEEEEE-cCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+|+.++.||+|||++||.+++ .+|..||+|++.+........ .+...+||+|.++++|||||++++|+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~----------reKv~~EIeIHr~L~HpnIV~f~~~F 87 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQ----------REKVLNEIEIHRSLKHPNIVQFYHFF 87 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcch----------HHHHHHHHHHHHhcCCCcEEeeeeEe
Confidence 4678889999999999999998 569999999998766544332 45688999999999999999999999
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
++ ...|||.|+|.+++|..++.+ ..++++..++.++.||+.||.|||+ ++|||||||..|++|+++.++||+||
T Consensus 88 EDs~nVYivLELC~~~sL~el~Kr---rk~ltEpEary~l~QIv~GlkYLH~--~~IiHRDLKLGNlfL~~~~~VKIgDF 162 (592)
T KOG0575|consen 88 EDSNNVYIVLELCHRGSLMELLKR---RKPLTEPEARYFLRQIVEGLKYLHS--LGIIHRDLKLGNLFLNENMNVKIGDF 162 (592)
T ss_pred ecCCceEEEEEecCCccHHHHHHh---cCCCCcHHHHHHHHHHHHHHHHHHh--cCceecccchhheeecCcCcEEeccc
Confidence 99 899999999999999999886 5689999999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|||........ ...+++|||.|+|||++.+ +.+..+||||+|||+|-||.|++||...+....+..+...+..++.
T Consensus 163 GLAt~le~~~E---rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~ 239 (592)
T KOG0575|consen 163 GLATQLEYDGE---RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS 239 (592)
T ss_pred ceeeeecCccc---ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc
Confidence 99988765421 2346899999999997754 6788999999999999999999999988766666665554444443
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.++...++||.++|..+|.+|||+++|+.
T Consensus 240 ------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 240 ------------HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ------------ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 34555889999999999999999999985
No 4
>KOG0615|consensus
Probab=100.00 E-value=3.1e-49 Score=378.65 Aligned_cols=257 Identities=25% Similarity=0.417 Sum_probs=207.2
Q ss_pred CCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 168 RKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 168 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
...+|.+.+.||+|+||.|-+|..+ +|+.||||++++.......... .......+|+++|++++|||||++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~------~~~~~v~~EieILkkL~HP~IV~~~d 243 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAI------AKTRDVQNEIEILKKLSHPNIVRIKD 243 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccc------cchhhhHHHHHHHHhcCCCCEEEEee
Confidence 3456788999999999999999876 5999999999876543322101 01222579999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC---Cce
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN---FVP 322 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~---~~~ 322 (455)
++.+ +..|+||||+.||+|.+++.. ++.+.+..-..++.|++.|+.|||+ .||+||||||+|||+..+ ..+
T Consensus 244 ~f~~~ds~YmVlE~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkYLH~--~GI~HRDiKPeNILl~~~~e~~ll 318 (475)
T KOG0615|consen 244 FFEVPDSSYMVLEYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKYLHS--QGIIHRDIKPENILLSNDAEDCLL 318 (475)
T ss_pred eeecCCceEEEEEEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHHHHH--cCcccccCCcceEEeccCCcceEE
Confidence 9988 677999999999999999988 4568888889999999999999999 899999999999999765 789
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCcccccCC---CC-ChhhHHHHHHHHHHHHcCCCCCCCCchhh-HHHHH
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ---IS-TKTDVFSYGVILLELLTGMKPIDDNNTIL-YYYLV 397 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~s-~~sDi~SlGvvl~elltG~~p~~~~~~~~-~~~~~ 397 (455)
||+|||+|++..... ...+.+||+.|.|||++.++ .+ .++|+||+|||||-+|+|.+||.+..... ....+
T Consensus 319 KItDFGlAK~~g~~s----fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI 394 (475)
T KOG0615|consen 319 KITDFGLAKVSGEGS----FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI 394 (475)
T ss_pred Eecccchhhccccce----ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH
Confidence 999999999876432 24568999999999988543 33 48999999999999999999998876432 33333
Q ss_pred HhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...+ +......++....+||.+||..||++||+++|+++
T Consensus 395 ~~G~y~f--------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 395 LKGRYAF--------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hcCcccc--------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 2222111 12223467778899999999999999999999876
No 5
>KOG0581|consensus
Probab=100.00 E-value=1.8e-48 Score=370.78 Aligned_cols=241 Identities=29% Similarity=0.392 Sum_probs=200.3
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c-c
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I-M 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~-~ 252 (455)
+.||+|..|+||++.++. ++.+|+|++..... ....++..+|++++++++|||||.+||.+.. . .
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~------------~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNID------------PALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCC------------HHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 889999999999999984 88899999953321 1226779999999999999999999996655 6 4
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.+|+||||.+|||.+.+... +.+++....+|+.++++||.|||+. ++||||||||+|||++..|.+||||||.+..
T Consensus 153 isI~mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~-~~IIHRDIKPsNlLvNskGeVKicDFGVS~~ 228 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEE-RKIIHRDIKPSNLLVNSKGEVKICDFGVSGI 228 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhc-cCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence 89999999999999999874 4699999999999999999999953 7899999999999999999999999999887
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCc-----hhhHHHHHHhcccchhh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNN-----TILYYYLVVEQEVPVRE 406 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~-----~~~~~~~~~~~~~~~~~ 406 (455)
.... ...+++||..|||||.+.| .++.++||||||++++|+.+|+.||.... .......+.
T Consensus 229 lvnS-----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv-------- 295 (364)
T KOG0581|consen 229 LVNS-----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV-------- 295 (364)
T ss_pred hhhh-----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh--------
Confidence 6544 3457899999999997766 68999999999999999999999998752 111111122
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+......+...++..+++|+.+||.+||.+||++.|+++
T Consensus 296 --~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 296 --DEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred --cCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111122233347777999999999999999999999875
No 6
>KOG0595|consensus
Probab=100.00 E-value=2.8e-47 Score=365.62 Aligned_cols=208 Identities=32% Similarity=0.510 Sum_probs=179.2
Q ss_pred CCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.-|...++||+|+||+||+|+++. +..||||.+.+..... ...+-+..|+++|+.++|||||.+++++
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~-----------k~~e~L~~Ei~iLkel~H~nIV~l~d~~ 78 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNK-----------KLVELLLSEIKILKELKHPNIVRLLDCI 78 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCH-----------HHHHHHHHHHHHHHhcCCcceeeEEEEE
Confidence 345566889999999999999874 8999999997653210 1134478999999999999999999998
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC------Cc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN------FV 321 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~------~~ 321 (455)
.. +..|||||||.||+|.++++..+ .+++..+..++.|++.||++||+ ++||||||||+||||+.. -.
T Consensus 79 ~~~~~i~lVMEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~--~~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 79 EDDDFIYLVMEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHE--NNIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred ecCCeEEEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCcceEEeccCCCCCCCce
Confidence 87 88899999999999999999854 59999999999999999999999 899999999999999764 56
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHH
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 397 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~ 397 (455)
+||+|||+|+...... ...+.+|++-|||||++ .++|+.|+|+||+|+|+|++++|..||+..........+
T Consensus 154 LKIADFGfAR~L~~~~----~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~ 226 (429)
T KOG0595|consen 154 LKIADFGFARFLQPGS----MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYI 226 (429)
T ss_pred EEecccchhhhCCchh----HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 8999999999887543 35678999999999977 778999999999999999999999999988754443333
No 7
>KOG0197|consensus
Probab=100.00 E-value=1.6e-46 Score=372.60 Aligned_cols=249 Identities=29% Similarity=0.457 Sum_probs=209.2
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-ccee
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
+.||+|-||.||.|.++....||+|.++.... ..+.|.+|+++|++++|+|||+++|+|.. +..+
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy 277 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY 277 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence 78999999999999999777999999986532 13459999999999999999999999988 5689
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
||||||+.|||.++|+.. .+..+...+.+.++.|||.|++||++ +++|||||-..||||++++.+||+|||||+...
T Consensus 278 IVtE~m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes--~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLES--KNYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEEEecccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHh--CCccchhhhhhheeeccCceEEEcccccccccC
Confidence 999999999999999973 35679999999999999999999999 889999999999999999999999999999554
Q ss_pred CCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 335 TSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.+.... .....-...|.|||++ .+.++.|||||||||+||||+| |+.||...........+. ...
T Consensus 355 d~~Y~~--~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le-----------~Gy 421 (468)
T KOG0197|consen 355 DDEYTA--SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLE-----------RGY 421 (468)
T ss_pred CCceee--cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHh-----------ccC
Confidence 433211 1222334569999966 6789999999999999999999 999999877544333332 222
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.-..+..++..+.+++..||..+|++|||++.+...|+++..
T Consensus 422 Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 422 RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 333456678889999999999999999999999999988754
No 8
>KOG0598|consensus
Probab=100.00 E-value=1.5e-46 Score=357.63 Aligned_cols=238 Identities=27% Similarity=0.356 Sum_probs=201.7
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||.++.++ ++.+|+|++++....... .......|..||.+++||.||+++-.+++
T Consensus 28 ~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~----------e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~ 97 (357)
T KOG0598|consen 28 EILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKK----------EVRHTKAERNILSKIKHPFIVKLIYSFQTE 97 (357)
T ss_pred eeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhh----------hHHHHHHHHHHHHhCCCCcEeeeEEecccC
Confidence 445999999999999999875 899999999877653321 14557899999999999999999876676
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|||+||+.||.|...|++. ..+++..++.++.+|+.||.|||+ +|||||||||+|||||.+|+++|+|||++
T Consensus 98 ~kLylVld~~~GGeLf~hL~~e---g~F~E~~arfYlaEi~lAL~~LH~--~gIiyRDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQRE---GRFSEDRARFYLAEIVLALGYLHS--KGIIYRDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhc---CCcchhHHHHHHHHHHHHHHHHHh--CCeeeccCCHHHeeecCCCcEEEeccccc
Confidence 8999999999999999999984 459999999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcc-cchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE-VPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~-~~~~~~~ 408 (455)
+..-... ..+.+++||+.|||||++ ..+++.++|+||+||++|||++|.+||...+...+...+..+. ...+.+
T Consensus 173 k~~~~~~---~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~- 248 (357)
T KOG0598|consen 173 KEDLKDG---DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGY- 248 (357)
T ss_pred hhcccCC---CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCcc-
Confidence 8654433 235568999999999966 5578999999999999999999999999988766666666544 222222
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCC
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
.+...++++.+++..||++|.
T Consensus 249 -----------ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 249 -----------LSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----------CCHHHHHHHHHHhccCHHHhc
Confidence 344478899999999999995
No 9
>KOG0591|consensus
Probab=100.00 E-value=4.5e-47 Score=347.66 Aligned_cols=255 Identities=24% Similarity=0.366 Sum_probs=206.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc--
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC-- 248 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-- 248 (455)
|++.++||+|+||+||++... +|..||.|.++-... + ....+....|+.+|++++|||||++++..
T Consensus 21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m------d-----~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~ 89 (375)
T KOG0591|consen 21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM------D-----AKARQDCVKEISLLKQLNHPNIVQYYAHSFI 89 (375)
T ss_pred HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc------c-----HHHHHHHHHHHHHHHhcCCchHHHHHHHhhh
Confidence 355689999999999999864 689999999973322 1 11256688999999999999999999933
Q ss_pred cCcc-eeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC--CCCeEecCCCCCcEEECCCCceEE
Q psy520 249 NNIM-NCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSL--SKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 249 ~~~~-~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~--~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
.+.. ..||||||.+|+|...++...+ +..+++..+++++.|+++||.++|+. ..-|+||||||+||+|+.+|.+||
T Consensus 90 ~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 90 EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence 3333 7899999999999998876543 56899999999999999999999983 334999999999999999999999
Q ss_pred ccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc
Q psy520 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+|||++++..... ..+...+|||.||+||.+ ..+++.+|||||+||++|||+.-++||.+.+-......+...+.+
T Consensus 170 GDfGL~r~l~s~~---tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~ 246 (375)
T KOG0591|consen 170 GDFGLGRFLSSKT---TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP 246 (375)
T ss_pred ccchhHhHhcchh---HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC
Confidence 9999999886542 334568999999999966 457899999999999999999999999988655555555443221
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..+...++..+..+|..|+..||..||+...++..+.
T Consensus 247 ----------~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 247 ----------PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred ----------CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 2234567788999999999999999999655554443
No 10
>KOG0592|consensus
Probab=100.00 E-value=1.5e-45 Score=363.95 Aligned_cols=248 Identities=27% Similarity=0.401 Sum_probs=210.2
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
..++.||+|+|++||+|+.+. ++.||||++.+.-.....+ ......|-.+|.+| .||.|++|+-.+.|
T Consensus 76 ~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~K----------vkYV~~Ek~~l~~L~~hPgivkLy~TFQD 145 (604)
T KOG0592|consen 76 KFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKK----------VKYVTREKEALTQLSGHPGIVKLYFTFQD 145 (604)
T ss_pred chhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcc----------cchhhHHHHHHHHhhCCCCeEEEEEEeec
Confidence 556899999999999999874 8999999997765533322 34467888999999 89999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+|+||++||+|.++|.+.+ .+++...+.++.+|+.||+|||+ +|||||||||+|||||+|+++||+|||.
T Consensus 146 ~~sLYFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~--~GIIHRDlKPENILLd~dmhikITDFGs 220 (604)
T KOG0592|consen 146 EESLYFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHS--NGIIHRDLKPENILLDKDGHIKITDFGS 220 (604)
T ss_pred ccceEEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeEcCCCcEEEeeccc
Confidence 88999999999999999999854 59999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcc------cce----eccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHH
Q psy520 330 VKMSETSNMK------TMY----TENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 330 a~~~~~~~~~------~~~----~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
|+........ ... ...++||..|.+||++.. ..++.+|+|+||||||.|+.|++||.+.++++....+.
T Consensus 221 AK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~ 300 (604)
T KOG0592|consen 221 AKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ 300 (604)
T ss_pred cccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH
Confidence 9887654321 111 135899999999998865 46889999999999999999999999999988888776
Q ss_pred hcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 399 EQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.-...+++. .+..+.+||.+.|..||++|++..++-+
T Consensus 301 ~l~y~fp~~------------fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 301 ALDYEFPEG------------FPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HhcccCCCC------------CCHHHHHHHHHHHccCccccccHHHHhh
Confidence 644444333 3355889999999999999999988754
No 11
>KOG0593|consensus
Probab=100.00 E-value=1.5e-45 Score=340.81 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=202.2
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+...++|+|+||+||+++.++ |+.||||++....+ + ....+-.++|++.|++++|||+|.+++.|..
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-------d----~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr 72 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-------D----PVVKKIALREIRMLKQLKHENLVNLIEVFRR 72 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc-------c----HHHHHHHHHHHHHHHhcccchHHHHHHHHHh
Confidence 4555889999999999999886 99999999964322 1 1224557899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...+||+|||+. ++.+.|.+... .++...+.+++.|++.|+.|+|+ +++|||||||+||||+.+|.+||||||+
T Consensus 73 krklhLVFE~~dh-TvL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk--~n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 73 KRKLHLVFEYCDH-TVLHELERYPN--GVPSELVKKYLYQLLKAIHFCHK--NNCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred cceeEEEeeecch-HHHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhhh--cCeecccCChhheEEecCCcEEeccchh
Confidence 888999999964 55555665433 58899999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cccc--
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVP-- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~-- 403 (455)
|+...... ......+.|.+|.|||.+-| ++...+||||+||++.||++|.+.|.+..+...-+.+.. ++..
T Consensus 148 AR~L~~pg---d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~pr 224 (396)
T KOG0593|consen 148 ARTLSAPG---DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPR 224 (396)
T ss_pred hHhhcCCc---chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHH
Confidence 99876321 12345688999999997755 689999999999999999999999998875554444433 1111
Q ss_pred ---------------hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 ---------------VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ---------------~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+++.-++..-+.....++..+.+|+..|+..||.+|++-++++.
T Consensus 225 hq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 225 HQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111111111112345668889999999999999999999874
No 12
>KOG0198|consensus
Probab=100.00 E-value=8.6e-45 Score=350.37 Aligned_cols=250 Identities=30% Similarity=0.441 Sum_probs=199.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
+..++.||+|+||.||++...+ |...|||.+....... .+.+.+|+.+|++++|||||+++|....
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-------------~~~l~~Ei~iL~~l~~p~IV~~~G~~~~ 85 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-------------SESLEREIRILSRLNHPNIVQYYGSSSS 85 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-------------HHHHHHHHHHHHhCCCCCEEeeCCcccc
Confidence 4456899999999999999875 8999999986542100 3458899999999999999999997433
Q ss_pred -c--ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC-CCceEEcc
Q psy520 251 -I--MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGD 326 (455)
Q Consensus 251 -~--~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl~D 326 (455)
. .+++.|||+++|||.+++.+.++ .+++..+..++.|++.||.|||+ +|+||+||||+|||++. ++.+||+|
T Consensus 86 ~~~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs--~g~vH~DiK~~NiLl~~~~~~~KlaD 161 (313)
T KOG0198|consen 86 RENDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS--KGIVHCDIKPANILLDPSNGDVKLAD 161 (313)
T ss_pred ccCeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh--CCEeccCcccceEEEeCCCCeEEecc
Confidence 3 58899999999999999998653 69999999999999999999999 99999999999999999 79999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccCCC--CChhhHHHHHHHHHHHHcCCCCCCCC-chhhHHHHHHhcccc
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDN-NTILYYYLVVEQEVP 403 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--s~~sDi~SlGvvl~elltG~~p~~~~-~~~~~~~~~~~~~~~ 403 (455)
||++.................||+.|||||++.... ..++|||||||++.||+||.+||... ........+.... .
T Consensus 162 FG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~ 240 (313)
T KOG0198|consen 162 FGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-S 240 (313)
T ss_pred CccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-C
Confidence 999887654211222234679999999999876433 34999999999999999999999873 2222222221111 1
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.+ .+ +..++...++||.+|+..+|++|||++++++.
T Consensus 241 ~P--------~i-p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 241 LP--------EI-PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CC--------CC-CcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 11 11 22356668999999999999999999999874
No 13
>KOG0583|consensus
Probab=100.00 E-value=4.5e-44 Score=357.82 Aligned_cols=250 Identities=30% Similarity=0.445 Sum_probs=207.0
Q ss_pred CCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceeccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGF 247 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~ 247 (455)
..|++++.||+|+||.|+.|... ++..||+|++......... .. ......+|+.++++++ ||||++++.+
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~-~~-------~~~~i~rEi~~~~~~~~HpnI~~l~ev 88 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS-QK-------LDELIKREISILRRLRSHPNIIRLLEV 88 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc-cc-------cchhhHHHHHHHHHhccCCCEeEEEEE
Confidence 45678899999999999999876 4899999987654221111 00 1334668999999999 9999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC-CceEEc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKLG 325 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl~ 325 (455)
... ...++||||+.||+|.+++.. ..++.+..+..++.|++.|++|||+ +||+||||||+|||++.+ +.+||+
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~--~gi~HRDLK~ENilld~~~~~~Kl~ 163 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHS--RGIVHRDLKPENILLDGNEGNLKLS 163 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEecCCCCCEEEe
Confidence 877 778999999999999999998 3468999999999999999999999 899999999999999999 999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccCC--C-CChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ--I-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~-s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
|||++..... ........+||+.|+|||++.+. + ..++||||+||+||.|++|..||++.........+.....
T Consensus 164 DFG~s~~~~~---~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 164 DFGLSAISPG---EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF 240 (370)
T ss_pred ccccccccCC---CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc
Confidence 9999987741 11224567999999999988764 4 4689999999999999999999999776555555555555
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
.++..+. +..+++|+.+||..+|.+|+++.+++
T Consensus 241 ~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 241 KIPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred cCCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 5555542 33478899999999999999999997
No 14
>KOG0616|consensus
Probab=100.00 E-value=1.5e-44 Score=333.31 Aligned_cols=231 Identities=30% Similarity=0.425 Sum_probs=202.9
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||.|+||.|.+++.+. |..+|+|++++... ......+...+|..+|+.+.||+++++++.+.+ ...
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v----------VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~l 119 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV----------VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNL 119 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHHH----------HHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeE
Confidence 889999999999999875 88899999975443 122235667899999999999999999998877 899
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||.+||.|..+|++. .++++..++.++.+|+.||+|||+ .+|++|||||+|||+|.+|.+||+|||+|+..
T Consensus 120 ymvmeyv~GGElFS~Lrk~---~rF~e~~arFYAAeivlAleylH~--~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKS---GRFSEPHARFYAAEIVLALEYLHS--LDIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred EEEEeccCCccHHHHHHhc---CCCCchhHHHHHHHHHHHHHHHHh--cCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 9999999999999999984 469999999999999999999999 88999999999999999999999999999875
Q ss_pred cCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
... +.+.+|||.|+|||++ ...+..++|+|||||++|||+.|.+||...+....+..+......++.++.+.
T Consensus 195 ~~r------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~- 267 (355)
T KOG0616|consen 195 SGR------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSD- 267 (355)
T ss_pred cCc------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHH-
Confidence 432 5578999999999966 45678899999999999999999999999998888888888777777666654
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCC
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKR 439 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~R 439 (455)
+++||.++++.|-.+|
T Consensus 268 -----------~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 268 -----------AKDLLKKLLQVDLTKR 283 (355)
T ss_pred -----------HHHHHHHHHhhhhHhh
Confidence 7888999999997777
No 15
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.8e-43 Score=352.17 Aligned_cols=259 Identities=24% Similarity=0.371 Sum_probs=199.2
Q ss_pred CCcCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceec
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.|++.++||+|+||.||+|.+. +++.||||+++.... .. ....+.+|+.++.++ +||||++
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~------~~~~~~~E~~~l~~l~~h~niv~ 75 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT------AS------EHKALMSELKILIHIGNHLNVVN 75 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc------hH------HHHHHHHHHHHHHHhccCcceee
Confidence 3566799999999999999752 256899999864321 00 134588999999999 8999999
Q ss_pred ccccccC--cceeEEEEeccCCCHHHHHhhcCC-----------------------------------------------
Q psy520 244 LLGFCNN--IMNCIVYEYMCNGSLYDRLARVNN----------------------------------------------- 274 (455)
Q Consensus 244 l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------- 274 (455)
+++++.. ...++||||+++|+|.+++.....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 9998765 457899999999999999975321
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCcccce
Q psy520 275 ------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 342 (455)
Q Consensus 275 ------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 342 (455)
..++++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++....... ...
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~ 232 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVR 232 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH--CCEECCCCccceEEEcCCCcEEEeecccccccccCcc-hhc
Confidence 1358889999999999999999999 8999999999999999999999999999986533211 111
Q ss_pred eccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHH
Q psy520 343 TENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHV 420 (455)
Q Consensus 343 ~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 420 (455)
.....++..|+|||++ ...++.++|||||||++|||++ |..||.................. ...+..+
T Consensus 233 ~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~----------~~~~~~~ 302 (338)
T cd05102 233 KGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR----------MRAPENA 302 (338)
T ss_pred ccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC----------CCCCCCC
Confidence 2234567889999966 4467999999999999999997 99999865422111111111100 0011234
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 421 ETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 421 ~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+..+.+++.+||..||.+||++.+|++.|++++.
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 4568889999999999999999999999999875
No 16
>KOG0578|consensus
Probab=100.00 E-value=2.3e-43 Score=351.07 Aligned_cols=260 Identities=25% Similarity=0.420 Sum_probs=217.3
Q ss_pred HHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHc
Q psy520 157 CDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ 235 (455)
Q Consensus 157 ~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 235 (455)
..+......-+...+|..-.+||+|+.|.||.+... +++.||||++....... .+...+|+.+|+.
T Consensus 260 ~~l~~v~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~-------------keLilnEi~Vm~~ 326 (550)
T KOG0578|consen 260 AKLKRVVSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK-------------KELLLNEILVMRD 326 (550)
T ss_pred HHhheeccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc-------------hhhhHHHHHHHHh
Confidence 345555666677777888899999999999999875 47899999997654311 3447899999999
Q ss_pred CCCcceecccccc-cCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcE
Q psy520 236 CKHVNLLRLLGFC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 314 (455)
Q Consensus 236 l~h~niv~l~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NI 314 (455)
.+|+|||.+++.+ ..+..+.|||||+||+|.|.+.. ..+++.++..|+.+++.||+|||. +||+|||||++||
T Consensus 327 ~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH~--~gIiHrDIKSDnI 400 (550)
T KOG0578|consen 327 LHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK----TRMTEGQIAAICREILQGLKFLHA--RGIIHRDIKSDNI 400 (550)
T ss_pred ccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHHh--cceeeecccccee
Confidence 9999999999854 44889999999999999998875 359999999999999999999999 8999999999999
Q ss_pred EECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhH
Q psy520 315 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILY 393 (455)
Q Consensus 315 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~ 393 (455)
|++.+|.+||+|||+|........ .....+||+.|||||+.. ..+.+++||||||+++.||+-|.+||-..+...-
T Consensus 401 LL~~~g~vKltDFGFcaqi~~~~~---KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA 477 (550)
T KOG0578|consen 401 LLTMDGSVKLTDFGFCAQISEEQS---KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 477 (550)
T ss_pred EeccCCcEEEeeeeeeeccccccC---ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH
Confidence 999999999999999987665432 345689999999999774 4789999999999999999999999998776655
Q ss_pred HHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 394 YYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 394 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.+.....+. ...+..++..+++|+.+||..|+++|+++.|+++
T Consensus 478 lyLIa~ng~P~---------lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 478 LYLIATNGTPK---------LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHhhcCCCC---------cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 55554432221 1123467778999999999999999999999986
No 17
>KOG0661|consensus
Probab=100.00 E-value=4.2e-44 Score=348.77 Aligned_cols=255 Identities=23% Similarity=0.345 Sum_probs=203.6
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
|.+.++||.|+||.||+|+.+. |..||||+++++--... .-.=++|++.|+++. |||||++.+.+.
T Consensus 12 Y~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e------------e~~nLREvksL~kln~hpniikL~Evi~ 79 (538)
T KOG0661|consen 12 YTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE------------ECMNLREVKSLRKLNPHPNIIKLKEVIR 79 (538)
T ss_pred HHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH------------HHHHHHHHHHHHhcCCCCcchhhHHHhh
Confidence 4556899999999999999764 88999999986543110 112468999999998 999999999887
Q ss_pred C-c-ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 250 N-I-MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 250 ~-~-~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+ . ..++||||| ..+|++.+... ..++++..+..|+.||++||+|+|+ +|+.|||+||+|||+..+..+||+||
T Consensus 80 d~~~~L~fVfE~M-d~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk--~GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 80 DNDRILYFVFEFM-DCNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHK--HGFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred ccCceEeeeHHhh-hhhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHh--cCcccccCChhheEecccceeEeccc
Confidence 7 4 788999999 68999999876 4589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccc--cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cccc
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVP 403 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~--~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~ 403 (455)
|+||........+ ..+.|++|.|||++ .+-++.++|+||+|||++|+.+-++.|.+.++....+.+.. +...
T Consensus 155 GLARev~SkpPYT----eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~ 230 (538)
T KOG0661|consen 155 GLAREVRSKPPYT----EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPD 230 (538)
T ss_pred ccccccccCCCcc----hhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCc
Confidence 9999887654333 45789999999965 45689999999999999999999999998886655555543 1111
Q ss_pred hh---------hhcchhhcCCCh-------hHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 VR---------EVLDKEAGEWNE-------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~---------~~~d~~~~~~~~-------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ..+.-......+ ..++....+||.+||.+||.+|||+.|.++
T Consensus 231 ~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 231 KDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred cccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 11 011101111111 125666778999999999999999999886
No 18
>KOG0659|consensus
Probab=100.00 E-value=7.2e-43 Score=317.91 Aligned_cols=258 Identities=22% Similarity=0.277 Sum_probs=203.2
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|...++||+|+||.||+|++. +|+.||||+++.......- .....+|++.|+.++|+||+.+++.+.
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi-----------~~talREIK~Lqel~h~nIi~LiD~F~ 71 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI-----------NRTALREIKLLQELKHPNIIELIDVFP 71 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc-----------cHHHHHHHHHHHHccCcchhhhhhhcc
Confidence 3455689999999999999976 4999999999876432111 233679999999999999999999887
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ....||+||| ..+|+..++.. ...++..++..++.++++||+|||+ +.|+||||||.|+|++.+|.+||+|||
T Consensus 72 ~~~~l~lVfEfm-~tdLe~vIkd~--~i~l~pa~iK~y~~m~LkGl~y~H~--~~IlHRDlKPnNLLis~~g~lKiADFG 146 (318)
T KOG0659|consen 72 HKSNLSLVFEFM-PTDLEVVIKDK--NIILSPADIKSYMLMTLKGLAYCHS--KWILHRDLKPNNLLISSDGQLKIADFG 146 (318)
T ss_pred CCCceEEEEEec-cccHHHHhccc--ccccCHHHHHHHHHHHHHHHHHHHh--hhhhcccCCccceEEcCCCcEEeeccc
Confidence 7 8889999999 57899988774 4589999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--ccc--
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEV-- 402 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~-- 402 (455)
+++.+....... ...+-|..|.|||.+.| .++..+|+||.|||+.||+-|.+-|.+.++...-..+.. +..
T Consensus 147 LAr~f~~p~~~~---~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~ 223 (318)
T KOG0659|consen 147 LARFFGSPNRIQ---THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTP 223 (318)
T ss_pred chhccCCCCccc---ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCc
Confidence 999987654322 22377999999997755 588999999999999999999988887775443333333 111
Q ss_pred -c------hhhhcchhhcCC-----ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 -P------VREVLDKEAGEW-----NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 -~------~~~~~d~~~~~~-----~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ++++..-..-.. --..++...-+|+.+++..||.+|+++.|+++
T Consensus 224 ~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 224 DQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred ccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 1 122222111000 01234445678999999999999999999876
No 19
>KOG0582|consensus
Probab=100.00 E-value=8.3e-43 Score=337.39 Aligned_cols=260 Identities=23% Similarity=0.327 Sum_probs=205.9
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++...||.|..++||+|+.. .+..||||++..+.... ....+.+|++.++.++||||++++..+.
T Consensus 27 ~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~------------~ld~l~kE~~~msl~~HPNIv~~~~sFv 94 (516)
T KOG0582|consen 27 DYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN------------DLDALRKEVQTMSLIDHPNIVTYHCSFV 94 (516)
T ss_pred ceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh------------hHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence 4667799999999999999875 47999999997544311 1455889999999999999999998655
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...++||+||.+||+.+.+...-. ..+++..+..|++++++||.|||. +|.||||||+.||||+.+|.+||+|||
T Consensus 95 v~~~LWvVmpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~--~G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 95 VDSELWVVMPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQ--NGHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred ecceeEEeehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHh--cCceecccccccEEEcCCCcEEEcCce
Confidence 4 899999999999999999987543 459999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCccccee-ccCCCCCCcCCccccc---CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccch
Q psy520 329 IVKMSETSNMKTMYT-ENLTGTRPYMPPEAMH---CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 329 la~~~~~~~~~~~~~-~~~~gt~~Y~aPE~~~---~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
.+-............ ..+.||+.|||||++. .+|+.|+|||||||+..||.+|+.||.......+-.....+..+.
T Consensus 172 vsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~ 251 (516)
T KOG0582|consen 172 VSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPT 251 (516)
T ss_pred eeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCC
Confidence 866554443222222 6789999999999853 368999999999999999999999999876443333333222221
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ...............++.+++.|+..||.+|||++++++
T Consensus 252 ~~--t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 252 LL--TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cc--cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11 001111112234557899999999999999999999975
No 20
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-42 Score=336.71 Aligned_cols=262 Identities=20% Similarity=0.328 Sum_probs=206.0
Q ss_pred CcceeeeHHHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHH
Q psy520 149 GELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFEN 228 (455)
Q Consensus 149 ~~~~~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (455)
.++..+++.++... .. ..||+|++|.||+|.++ |+.||||+++...... ......|.+
T Consensus 10 ~~~~~i~~~~i~~~-----~~------~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~----------~~~~~~~~~ 67 (283)
T PHA02988 10 NDIKCIESDDIDKY-----TS------VLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGH----------KVLIDITEN 67 (283)
T ss_pred CcceecCHHHcCCC-----CC------eEEeeCCceEEEEEEEC-CEEEEEEecccccccc----------HHHHHHHHH
Confidence 34556677776322 11 67999999999999995 7999999996532210 111456889
Q ss_pred HHHHHHcCCCcceecccccccC-----cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q psy520 229 EVQTLSQCKHVNLLRLLGFCNN-----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP 303 (455)
Q Consensus 229 E~~~l~~l~h~niv~l~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~ 303 (455)
|+.++++++||||+++++++.+ ...++||||+++|+|.+++... ..+++.....++.+++.||.|||+. .+
T Consensus 68 E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~-~~ 143 (283)
T PHA02988 68 EIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKY-TN 143 (283)
T ss_pred HHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhc-CC
Confidence 9999999999999999997654 3568999999999999999863 4689999999999999999999972 37
Q ss_pred eEecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc---CCCCChhhHHHHHHHHHHHHc
Q psy520 304 IIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH---CQISTKTDVFSYGVILLELLT 380 (455)
Q Consensus 304 iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~s~~sDi~SlGvvl~ellt 380 (455)
++||||||+|||++.++.+||+|||+++...... ....||..|+|||++. +.++.++|||||||++|||++
T Consensus 144 ~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~ 217 (283)
T PHA02988 144 KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT 217 (283)
T ss_pred CCCCcCChhhEEECCCCcEEEcccchHhhhcccc------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHH
Confidence 8899999999999999999999999987643321 2346889999999875 367899999999999999999
Q ss_pred CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 381 GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 381 G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
|..||.................... .+..++..+.+++.+||..||++||+++++++.|+++
T Consensus 218 g~~Pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 218 GKIPFENLTTKEIYDLIINKNNSLK----------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CCCCCCCCCHHHHHHHHHhcCCCCC----------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 9999987654333222221111110 1113456789999999999999999999999999875
No 21
>KOG0193|consensus
Probab=100.00 E-value=8e-44 Score=355.57 Aligned_cols=257 Identities=29% Similarity=0.510 Sum_probs=208.2
Q ss_pred cCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCcc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNIM 252 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 252 (455)
.++.+||+|.||+||+|+|. -.||||+++....... ..+.|.+|+..+++-+|.||+-+.|||.++.
T Consensus 395 ~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~-----------qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPE-----------QLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred hccceeccccccceeecccc--cceEEEEEecCCCCHH-----------HHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 56799999999999999996 4799999986554211 2677999999999999999999999999977
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..||..+|+|-||+.+++..+. .+...+.+.|++||++|+.|||. ++|||||||+.||++.+++.|||+|||++..
T Consensus 462 ~AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHA--K~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 462 LAIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHA--KNIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred eeeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhh--hhhhhhhccccceEEccCCcEEEecccceee
Confidence 7999999999999999987653 68999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
...-. .........|...|||||++.. .++..|||||||||+|||+||..||.....+...+.+-.+.. .++..
T Consensus 538 k~~w~-g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l-~pd~s 615 (678)
T KOG0193|consen 538 KTRWS-GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYL-MPDLS 615 (678)
T ss_pred eeeec-cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccccc-Cccch
Confidence 54332 2222345678889999997743 478899999999999999999999985443222111111100 01111
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.....+++.+++|+..||..+++.||.+.+|+..|+.++.
T Consensus 616 ------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 616 ------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1124567789999999999999999999999998887764
No 22
>KOG0600|consensus
Probab=100.00 E-value=4.6e-43 Score=343.78 Aligned_cols=257 Identities=24% Similarity=0.341 Sum_probs=199.7
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+...+||+|+||.||++++. +|+.||+|+++........ .....+||.||+++.||||++|.+...+
T Consensus 120 eki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~-----------~~t~~REI~ILr~l~HpNIikL~eivt~~ 188 (560)
T KOG0600|consen 120 EKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGF-----------PITAIREIKILRRLDHPNIIKLEEIVTSK 188 (560)
T ss_pred HHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcc-----------hHHHHHHHHHHHhcCCCcccceeeEEEec
Confidence 34488999999999999975 5899999999865532111 2336799999999999999999996543
Q ss_pred --cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...|||+|||+ -+|.-++... .-.+++.++..++.|++.||.|||+ +||+|||||.+|||||.+|.+||+|||
T Consensus 189 ~~~siYlVFeYMd-hDL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~--~gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 189 LSGSIYLVFEYMD-HDLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHS--RGVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred CCceEEEEEeccc-chhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhh--cCeeeccccccceEEcCCCCEEecccc
Confidence 58899999995 5777766642 3469999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc-hh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP-VR 405 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~-~~ 405 (455)
||+++....... .+ ..+-|.+|.|||++.| .|++++|+||.||||.||++|++.|.+..+....+.+..-... -.
T Consensus 264 LAr~y~~~~~~~-~T-~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e 341 (560)
T KOG0600|consen 264 LARFYTPSGSAP-YT-SRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTE 341 (560)
T ss_pred ceeeccCCCCcc-cc-cceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCCh
Confidence 999876654222 23 3466999999997766 5899999999999999999999999999876666666541111 11
Q ss_pred hhcc----hhhcCCC------------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLD----KEAGEWN------------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d----~~~~~~~------------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+++. +....+. ....+....+|+..+|..||.+|.|+.++++
T Consensus 342 ~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 342 DYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred hccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1111 0000000 0123344556899999999999999999875
No 23
>KOG0588|consensus
Probab=100.00 E-value=6.9e-43 Score=351.59 Aligned_cols=245 Identities=28% Similarity=0.422 Sum_probs=207.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++++-||.|+.|.|-+|++. +|+.+|||++.+........ .....+|+-+|+-+.||||+.+|+.+.+
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~----------~~~IerEIviMkLi~HpnVl~LydVwe~ 83 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQ----------PAGIEREIVIMKLIEHPNVLRLYDVWEN 83 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeecccccccccc----------ccchhhhhHHHHHhcCCCeeeeeeeecc
Confidence 578899999999999999975 59999999998764333222 2336789999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
.+.|+|.||++||.|++++.+ ++++++..+.+++.||+.|+.|||. .+|+||||||+|+|||.++.+||+|||+
T Consensus 84 ~~~lylvlEyv~gGELFdylv~---kG~l~e~eaa~ff~QIi~gv~yCH~--~~icHRDLKpENlLLd~~~nIKIADFGM 158 (786)
T KOG0588|consen 84 KQHLYLVLEYVPGGELFDYLVR---KGPLPEREAAHFFRQILDGVSYCHA--FNICHRDLKPENLLLDVKNNIKIADFGM 158 (786)
T ss_pred CceEEEEEEecCCchhHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHhh--hcceeccCCchhhhhhcccCEeeeccce
Confidence 899999999999999999998 4579999999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccCCC--CChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
|..-..+. .-++.+|++.|.|||++.|.. ..++||||+|||||.||||+.||++++..........+...++.
T Consensus 159 AsLe~~gk----lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs- 233 (786)
T KOG0588|consen 159 ASLEVPGK----LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS- 233 (786)
T ss_pred eecccCCc----cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC-
Confidence 98654432 245679999999999887753 56999999999999999999999977654444444444444443
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.++...++||.+|+..||.+|.|+++|++
T Consensus 234 -----------~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 234 -----------NISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred -----------cCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 34555899999999999999999999986
No 24
>KOG4721|consensus
Probab=100.00 E-value=1.8e-43 Score=349.33 Aligned_cols=235 Identities=30% Similarity=0.517 Sum_probs=198.2
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-ccee
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
+-||.|+.|-||+|+++ ++.||||+++.- -..+|+-|++|+||||+.+.|+|.. ..+|
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~el--------------------kETdIKHLRkLkH~NII~FkGVCtqsPcyC 188 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVREL--------------------KETDIKHLRKLKHPNIITFKGVCTQSPCYC 188 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhh--------------------hhhhHHHHHhccCcceeeEeeeecCCceeE
Confidence 67999999999999998 699999998521 2368999999999999999999988 8999
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
||||||+.|.|...|+. ..+++......|..+||.|+.|||. +.|||||||+-||||..+..+||+|||.++...
T Consensus 189 IiMEfCa~GqL~~VLka---~~~itp~llv~Wsk~IA~GM~YLH~--hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 189 IIMEFCAQGQLYEVLKA---GRPITPSLLVDWSKGIAGGMNYLHL--HKIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred EeeeccccccHHHHHhc---cCccCHHHHHHHHHHhhhhhHHHHH--hhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 99999999999999987 4578999999999999999999999 889999999999999999999999999988655
Q ss_pred CCCcccceeccCCCCCCcCCcccccCC-CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhc
Q psy520 335 TSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAG 413 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 413 (455)
... + .-.+.||.+|||||+++.+ .+.|+|||||||||||||||..||.+.+.....+-. + ...+.
T Consensus 264 ~~S--T--kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV--G--------sNsL~ 329 (904)
T KOG4721|consen 264 DKS--T--KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV--G--------SNSLH 329 (904)
T ss_pred hhh--h--hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec--c--------CCccc
Confidence 432 2 2357999999999988665 589999999999999999999999876643221111 1 11112
Q ss_pred CCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 414 EWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 414 ~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..-+..++.-++-|+++||.-.|.+||++.+++..|+
T Consensus 330 LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 330 LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 2234556777888999999999999999999998875
No 25
>KOG0597|consensus
Probab=100.00 E-value=1.2e-42 Score=343.76 Aligned_cols=244 Identities=27% Similarity=0.405 Sum_probs=205.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||+||||+.+. .+.||+|.+.+..... ..+.-..+|++|++.++|||||.++++++.
T Consensus 4 yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~-----------k~l~~l~~ev~i~r~lkHpniv~m~esfEt 72 (808)
T KOG0597|consen 4 YHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNE-----------KELKNLRQEVRILRSLKHPNIVEMLESFET 72 (808)
T ss_pred hhHHHHhcCCccceeeecccccceeEEEEEEehhcCCch-----------HHHHHHHHHHHHHHhcCCcchhhHHHhhcc
Confidence 4455789999999999999874 7889999997644311 114558899999999999999999998888
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
.+.|+|.||+.| +|..+|.. ...++++++..|+.+++.||.|||+ .+|+|||+||.|||++.+|.+|+||||+
T Consensus 73 ~~~~~vVte~a~g-~L~~il~~---d~~lpEe~v~~~a~~LVsaL~yLhs--~rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 73 SAHLWVVTEYAVG-DLFTILEQ---DGKLPEEQVRAIAYDLVSALYYLHS--NRILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred cceEEEEehhhhh-hHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHh--cCcccccCCcceeeecCCCceeechhhh
Confidence 899999999966 99999988 4569999999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
|+.... .+...+.+.|||-|||||++.+ .++..+|.||+|||+||+.+|++||...........+...+..
T Consensus 147 Ar~m~~---~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~----- 218 (808)
T KOG0597|consen 147 ARAMST---NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK----- 218 (808)
T ss_pred hhhccc---CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC-----
Confidence 998765 3445677899999999997765 5788999999999999999999999877644443333322222
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++..++..+..|+...+.+||.+|.+..+++.
T Consensus 219 -------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 219 -------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -------CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 22356777899999999999999999998864
No 26
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.8e-42 Score=333.52 Aligned_cols=243 Identities=26% Similarity=0.387 Sum_probs=196.6
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|..+ +++.||||++....... ......+.+|+.++++++||||+++++++.+
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 72 (291)
T cd05612 3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----------LKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD 72 (291)
T ss_pred ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----------hHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc
Confidence 455689999999999999987 48899999986432110 0113458899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ +|++||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 73 QRFLYMLMEYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHS--KEIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred CCeEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEEEecCc
Confidence 788999999999999999986 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++..... .....||+.|+|||++.+ ..+.++|||||||++|||++|..||...........+......++
T Consensus 148 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~--- 218 (291)
T cd05612 148 AKKLRDR------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFP--- 218 (291)
T ss_pred chhccCC------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCC---
Confidence 8765332 223579999999997754 568899999999999999999999987664433333322222111
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCC-----HHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
...+..+.+||.+|+..||.+||+ ++++++
T Consensus 219 ---------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 219 ---------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ---------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 122445889999999999999995 777764
No 27
>KOG0585|consensus
Probab=100.00 E-value=1.8e-42 Score=337.04 Aligned_cols=263 Identities=22% Similarity=0.311 Sum_probs=208.4
Q ss_pred CCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCc-chhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNS-DNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~-~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
..|++...||+|.||.|-+|+... ++.||||++.+......... .........++...+||.||++|+|||||+|+++
T Consensus 97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv 176 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV 176 (576)
T ss_pred hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence 446777999999999999999764 89999999987654322111 1112223456789999999999999999999998
Q ss_pred ccC---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEE
Q psy520 248 CNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 248 ~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
..+ ...|||+|||..|.+...= ...+.+++.++++++.+++.||.|||. +|||||||||+|+||+.+|++||
T Consensus 177 LDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~--QgiiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 177 LDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHY--QGIIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred ecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHh--cCeeccccchhheEEcCCCcEEe
Confidence 766 6889999999999874321 112339999999999999999999999 89999999999999999999999
Q ss_pred ccccccccccCCCcc--cceeccCCCCCCcCCcccccCC-----CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHH
Q psy520 325 GDFGIVKMSETSNMK--TMYTENLTGTRPYMPPEAMHCQ-----ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 397 (455)
Q Consensus 325 ~DFGla~~~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~~-----~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~ 397 (455)
+|||.+..+...... .......+|||+|+|||...++ .+.+.||||+||+||.++.|+.||.+......+..+
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI 331 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI 331 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence 999998876433211 1223457999999999966442 256899999999999999999999998877777777
Q ss_pred HhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......++.. ......+++||.++|.+||++|.++.+|..
T Consensus 332 vn~pL~fP~~----------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 332 VNDPLEFPEN----------PEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred hcCcccCCCc----------ccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 6554443322 134566999999999999999999998753
No 28
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.5e-42 Score=339.18 Aligned_cols=242 Identities=23% Similarity=0.358 Sum_probs=194.5
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||++..+ +|+.||||+++...... ......+.+|+.++++++||||+++++++.+ ...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~ 70 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----------KDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRL 70 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEE
Confidence 36999999999999976 48999999997532211 1113457889999999999999999997776 788
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++..
T Consensus 71 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~--~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 71 CFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHS--CDVVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence 999999999999999986 3468999999999999999999999 89999999999999999999999999998753
Q ss_pred cCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p------- 215 (323)
T cd05571 146 ISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP------- 215 (323)
T ss_pred ccCC---CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC-------
Confidence 2221 11234679999999997754 578999999999999999999999987654333322222221111
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.+||.+||..||++|| ++.++++
T Consensus 216 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 216 -----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -----CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 22445588899999999999999 7888864
No 29
>KOG0605|consensus
Probab=100.00 E-value=6.6e-42 Score=338.32 Aligned_cols=248 Identities=21% Similarity=0.286 Sum_probs=198.8
Q ss_pred CCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..+++...||+|+||.||+|+-++ |..+|+|++++....... .......|=.+|....+|+||++|-.+
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~----------Qv~hV~aERdiL~~~ds~~vVKLyYsF 210 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKN----------QVEHVRAERDILAEVDSPWVVKLYYSF 210 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhh----------hHHHHHHHHHHhhhcCCCcEEEEEEEe
Confidence 344566999999999999999775 999999999876542221 245577899999999999999999888
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ ...||||||++||++..+|.+ ...|++..++.++.+++.||..||+ .|+|||||||+|+|||..|++||+||
T Consensus 211 QD~~~LYLiMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~--~gyIHRDIKPdNlLiD~~GHiKLSDF 285 (550)
T KOG0605|consen 211 QDKEYLYLIMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQ--LGYIHRDIKPDNLLIDAKGHIKLSDF 285 (550)
T ss_pred cCCCeeEEEEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHH--cCcccccCChhheeecCCCCEeeccc
Confidence 88 899999999999999999998 4579999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCC----------------------Ccc------c----------------ceeccCCCCCCcCCcccccC-CC
Q psy520 328 GIVKMSETS----------------------NMK------T----------------MYTENLTGTRPYMPPEAMHC-QI 362 (455)
Q Consensus 328 Gla~~~~~~----------------------~~~------~----------------~~~~~~~gt~~Y~aPE~~~~-~~ 362 (455)
||+.-.... ... . ......+|||.|||||++.+ ++
T Consensus 286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY 365 (550)
T KOG0605|consen 286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY 365 (550)
T ss_pred cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC
Confidence 998432110 000 0 00113479999999997755 57
Q ss_pred CChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC
Q psy520 363 STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS 441 (455)
Q Consensus 363 s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs 441 (455)
+..+|+||+|||+||||.|.+||...+....+..+..-...+. .......+....|||.+||. ||++|..
T Consensus 366 ~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~--------fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 366 GKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK--------FPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc--------CCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 8999999999999999999999999987777766654221111 11122334568888988888 9999965
No 30
>KOG0694|consensus
Probab=100.00 E-value=4.2e-42 Score=348.33 Aligned_cols=239 Identities=25% Similarity=0.355 Sum_probs=201.4
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
++.++||+|.||.|+++..++ ++.+|||++++....... + .+..+.|..|+... +||.++.++..+..
T Consensus 371 ~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d---~-------Ve~~~~EkrI~~la~~HPFL~~L~~~fQT 440 (694)
T KOG0694|consen 371 RLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRD---E-------VESLMCEKRIFELANRHPFLVNLFSCFQT 440 (694)
T ss_pred EEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccc---c-------HHHHHHHHHHHHHhccCCeEeeccccccc
Confidence 455999999999999999885 788999999988775442 2 44577788887766 59999999998887
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
.+.|+||||+.||++..+.+ ...+++..+..++..++.||+|||+ +||||||||.+|||||.+|++||+|||+
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~~----~~~F~e~rarfyaAev~l~L~fLH~--~~IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHIH----TDVFSEPRARFYAAEVVLGLQFLHE--NGIIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred CCeEEEEEEecCCCcEEEEEe----cccccHHHHHHHHHHHHHHHHHHHh--cCceeeecchhheEEcccCcEEeccccc
Confidence 89999999999999544433 3569999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++..-... ..+++++|||.|||||++.+ .|+.++|+|||||+|||||.|+.||.++++......+...+...+..+
T Consensus 515 cKe~m~~g---~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~l 591 (694)
T KOG0694|consen 515 CKEGMGQG---DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL 591 (694)
T ss_pred ccccCCCC---CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcc
Confidence 99754332 34778999999999998865 689999999999999999999999999988777777765544444333
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
+....+++.+++..+|++|.-+
T Consensus 592 ------------s~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 592 ------------SKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ------------cHHHHHHHHHHhccCcccccCC
Confidence 3446677889999999999776
No 31
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.2e-41 Score=332.07 Aligned_cols=262 Identities=28% Similarity=0.379 Sum_probs=196.9
Q ss_pred CCcCCCcccccCCEEEEEEEEcC-----------------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHH
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN-----------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTL 233 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 233 (455)
.|++.++||+|+||.||+|.+++ +..||+|.+..... . .....|.+|+.++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l 73 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN------K------NARNDFLKEVKIL 73 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC------H------HHHHHHHHHHHHH
Confidence 45667999999999999998642 33699999864321 1 0145588999999
Q ss_pred HcCCCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCC----------------CCCCCHHHHHHHHHHHHHHHHH
Q psy520 234 SQCKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN----------------TPPLDSNKRYSIALGVAEALHY 296 (455)
Q Consensus 234 ~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~----------------~~~l~~~~~~~i~~~i~~gL~~ 296 (455)
.+++||||+++++++.+ ...|+||||+++|+|.+++..... ...+++..+..++.|++.||.|
T Consensus 74 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~ 153 (304)
T cd05096 74 SRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKY 153 (304)
T ss_pred hhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence 99999999999998877 788999999999999999865321 2357889999999999999999
Q ss_pred HHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHH
Q psy520 297 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVIL 375 (455)
Q Consensus 297 LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl 375 (455)
||+ .+++||||||+|||++.++.+||+|||+++....... ........++..|+|||++ .+.++.++|||||||++
T Consensus 154 lH~--~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 230 (304)
T cd05096 154 LSS--LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL 230 (304)
T ss_pred HHH--CCccccCcchhheEEcCCccEEECCCccceecccCce-eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHH
Confidence 999 8899999999999999999999999999876543321 1122344568889999965 55689999999999999
Q ss_pred HHHHc--CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 376 LELLT--GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 376 ~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
|||++ +..||............... ..... .......+..++..+.+|+.+||..+|++||++.+|.+.|++
T Consensus 231 ~el~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 231 WEILMLCKEQPYGELTDEQVIENAGEF---FRDQG-RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred HHHHHccCCCCCCcCCHHHHHHHHHHH---hhhcc-ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 99987 66788765422211111000 00000 000001122345668899999999999999999999998863
No 32
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.5e-42 Score=341.25 Aligned_cols=243 Identities=25% Similarity=0.370 Sum_probs=196.3
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|+++. ++.||||+++...... ......+.+|+.++++++||||+++++++.+
T Consensus 20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 89 (329)
T PTZ00263 20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK----------MKQVQHVAQEKSILMELSHPFIVNMMCSFQD 89 (329)
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----------hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc
Confidence 4566899999999999999874 8899999997532211 1114558899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 164 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLRKA---GRFPNDVAKFYHAELVLAFEYLHS--KDIIYRDLKPENLLLDNKGHVKVTDFGF 164 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHEEECCCCCEEEeeccC
Confidence 7889999999999999999873 468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++..... .....||+.|+|||++.+ ..+.++|||||||++|||++|..||...........+......++.
T Consensus 165 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~-- 236 (329)
T PTZ00263 165 AKKVPDR------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN-- 236 (329)
T ss_pred ceEcCCC------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC--
Confidence 8765332 123579999999997754 5688999999999999999999999876644333333222222111
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCC-----HHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
.++..+.+||.+||..||.+||+ ++++++
T Consensus 237 ----------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 237 ----------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ----------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 13345788999999999999987 677653
No 33
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.3e-41 Score=344.07 Aligned_cols=257 Identities=27% Similarity=0.457 Sum_probs=197.6
Q ss_pred CcCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRL 244 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 244 (455)
|+++++||+|+||.||+|++. ++..||||+++..... . ....+.+|+.++..+ +||||+++
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-----~-------~~~~~~~Ei~il~~l~~HpnIv~l 104 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL-----T-------EREALMSELKVLSYLGNHINIVNL 104 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc-----H-------HHHHHHHHHHHHHHhcCCcceeee
Confidence 455699999999999999742 3568999998643210 1 134588999999999 89999999
Q ss_pred cccccC-cceeEEEEeccCCCHHHHHhhcCC-------------------------------------------------
Q psy520 245 LGFCNN-IMNCIVYEYMCNGSLYDRLARVNN------------------------------------------------- 274 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------- 274 (455)
++++.+ ...++|||||++|+|.+++.....
T Consensus 105 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (375)
T cd05104 105 LGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKAD 184 (375)
T ss_pred eeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccc
Confidence 998877 788999999999999999865321
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 275 -----------------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 275 -----------------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
...+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 262 (375)
T cd05104 185 KRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS--KNCIHRDLAARNILLTHGRITKICDFGLAR 262 (375)
T ss_pred cccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCchhhEEEECCCcEEEecCccce
Confidence 1257889999999999999999999 899999999999999999999999999988
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
......... ......++..|+|||.+. +.++.++|||||||++|||++ |..||..................
T Consensus 263 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~------ 335 (375)
T cd05104 263 DIRNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR------ 335 (375)
T ss_pred eccCccccc-ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc------
Confidence 654332111 112234567899999664 467899999999999999998 89999765422211111111100
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
...+...+..+.+|+.+||..||++||++.+|++.|++.+
T Consensus 336 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~~ 375 (375)
T cd05104 336 ----MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQL 375 (375)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhhC
Confidence 0011123456889999999999999999999999999754
No 34
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.8e-41 Score=333.77 Aligned_cols=242 Identities=23% Similarity=0.368 Sum_probs=193.7
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||++..+ +|+.||+|+++...... ......+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~ 70 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----------KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL 70 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEE
Confidence 36999999999999976 48999999997543211 0114457889999999999999999997766 788
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ +|++||||||+|||++.++.+||+|||+++..
T Consensus 71 ~lv~E~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 145 (323)
T cd05595 71 CFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence 999999999999998876 3468999999999999999999999 89999999999999999999999999998753
Q ss_pred cCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......||+.|+|||.+. +.++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p------- 215 (323)
T cd05595 146 ISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP------- 215 (323)
T ss_pred cCCC---CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-------
Confidence 2221 1123467999999999764 4678999999999999999999999987654333222222221111
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.++|.+||..||++|| ++.++++
T Consensus 216 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 216 -----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -----CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 12345578899999999999998 7888764
No 35
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2e-41 Score=333.95 Aligned_cols=239 Identities=23% Similarity=0.314 Sum_probs=190.9
Q ss_pred ccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||.||+|.+.+ ++.||+|+++....... .....+.+|+.++++++||||+++++++.+ ...++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~----------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 70 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSR----------SEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYL 70 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEE
Confidence 7999999999999874 78999999974322111 114557889999999999999999998776 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 71 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~ 145 (312)
T cd05585 71 VLAFINGGELFHHLQR---EGRFDLSRARFYTAELLCALENLHK--FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMK 145 (312)
T ss_pred EEcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHeEECCCCcEEEEECcccccCcc
Confidence 9999999999999986 3468999999999999999999999 8999999999999999999999999999875432
Q ss_pred CCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcC
Q psy520 336 SNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGE 414 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 414 (455)
.. .......||+.|+|||++.+ .++.++|||||||++|||++|..||...........+......+
T Consensus 146 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~---------- 212 (312)
T cd05585 146 DD---DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRF---------- 212 (312)
T ss_pred CC---CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCC----------
Confidence 21 12345679999999997654 57889999999999999999999998765433322222221111
Q ss_pred CChhHHHHHHHHHHHHhcccCcCCCCC---HHHHH
Q psy520 415 WNETHVETLISIVFEKCCVFEKDKRAS---MRDIV 446 (455)
Q Consensus 415 ~~~~~~~~~l~~Li~~~l~~dp~~RPs---~~evl 446 (455)
+..++..+.+||.+||..||++||+ +.+++
T Consensus 213 --~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 213 --PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred --CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 1234456889999999999999986 45554
No 36
>KOG0663|consensus
Probab=100.00 E-value=9.6e-42 Score=319.26 Aligned_cols=255 Identities=24% Similarity=0.308 Sum_probs=197.8
Q ss_pred CCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC--
Q psy520 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-- 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-- 250 (455)
..++|++|+||.||+|+++. ++.||+|+++....... .++ ...+||.+|.+++|||||.+-.+...
T Consensus 80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G----------FPI-tsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG----------FPI-TSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred HHhhcccCcceeEEEeccCCcceeEEeeecccccccCC----------Ccc-hhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 34899999999999999874 78999999986543211 112 25799999999999999999875433
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||||| .-+|...+.... .++...++..++.|+++|++|||. +.|+|||||++|+|+...|.+||+|||+
T Consensus 149 ~d~iy~VMe~~-EhDLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~--~wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 149 MDKIYIVMEYV-EHDLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHD--NWILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred cceeeeeHHHH-HhhHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhh--ceeEecccchhheeeccCCcEEecccch
Confidence 6789999999 467888887754 489999999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc-ccc---
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVP--- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~--- 403 (455)
||..+.... . ....+-|.+|.|||++.| .+++++|+||+|||+.|++++.+.|.+.........+... ..+
T Consensus 224 AR~ygsp~k--~-~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 224 AREYGSPLK--P-YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred hhhhcCCcc--c-CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence 998876531 1 234567999999997755 5799999999999999999999999988755444444331 111
Q ss_pred -hhhhcch--------------hh-cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 -VREVLDK--------------EA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -~~~~~d~--------------~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.+-.. .. ..+.....+..-.+|+..++..||++|.|+.+.++
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 1111000 00 11111124456778999999999999999998765
No 37
>KOG0580|consensus
Probab=100.00 E-value=5.2e-42 Score=308.13 Aligned_cols=245 Identities=26% Similarity=0.430 Sum_probs=207.6
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++++.||+|-||.||.|+.+. +..||+|++.+....... ...++.+|++|-+.++||||+++|+++.+
T Consensus 25 eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~----------v~~qlrREiEIqs~L~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 25 EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQ----------VEHQLRREIEIQSHLRHPNILRLYGYFHDS 94 (281)
T ss_pred cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhc----------chhhhhheeEeecccCCccHHhhhhheecc
Confidence 567999999999999999764 788999999876542221 24568999999999999999999999988
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...||++||.++|+|...|.... ...+++.....++.|+|.|+.|+|. +++|||||||+|+|++.++.+||+|||-+
T Consensus 95 ~riyLilEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~--k~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHL--KRVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhcc--CCcccCCCCHHHhccCCCCCeeccCCCce
Confidence 88899999999999999998533 4569999999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
...+.+. ....+||..|+|||...+ ..+..+|+|++|++.||++.|.+||........+..+..-...++
T Consensus 172 V~~p~~k-----R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p---- 242 (281)
T KOG0580|consen 172 VHAPSNK-----RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP---- 242 (281)
T ss_pred eecCCCC-----ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----
Confidence 7765332 345799999999997766 468899999999999999999999998876555555543333322
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..++...+++|.+|+..+|..|.+..||++
T Consensus 243 --------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 243 --------STISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred --------cccChhHHHHHHHHhccCccccccHHHHhh
Confidence 345556899999999999999999999876
No 38
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.1e-41 Score=336.69 Aligned_cols=259 Identities=19% Similarity=0.324 Sum_probs=193.4
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|.++ ++..||||+++...... . ....+.+|+.++++++||||+++++++..
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~-------~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 70 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV----S-------DATRILREIKLLRLLRHPDIVEIKHIMLP 70 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccc----h-------hHHHHHHHHHHHHhCCCCCEeeecceEec
Confidence 566789999999999999976 48999999986432110 0 13357899999999999999999987632
Q ss_pred ------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEE
Q psy520 251 ------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 251 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
...|+||||| +++|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||
T Consensus 71 ~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kL 144 (338)
T cd07859 71 PSRREFKDIYVVFELM-ESDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHT--ANVFHRDLKPKNILANADCKLKI 144 (338)
T ss_pred cCCCCCceEEEEEecC-CCCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCcEEE
Confidence 2478999999 5789998876 3469999999999999999999999 89999999999999999999999
Q ss_pred ccccccccccCCCcccceeccCCCCCCcCCccccc---CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-c
Q psy520 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH---CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
+|||+++................||+.|+|||++. ..++.++|||||||++|||+||++||.............. .
T Consensus 145 ~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 224 (338)
T cd07859 145 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL 224 (338)
T ss_pred ccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence 99999986543322222223467999999999764 3578899999999999999999999977653211111100 0
Q ss_pred ccchh------------hhcchhhcCCC------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVR------------EVLDKEAGEWN------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~------------~~~d~~~~~~~------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+.. ..+.......+ ...++..+.+++.+||..||++||+++++++
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00000000000 0123455788999999999999999999985
No 39
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.4e-41 Score=327.01 Aligned_cols=261 Identities=23% Similarity=0.311 Sum_probs=196.8
Q ss_pred CCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 167 NRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 167 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
.....|++.++||+|+||.||+|..+ +++.||+|+++....... ...+.+|+.++++++||||++++
T Consensus 2 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~niv~~~ 69 (288)
T cd07871 2 GKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------PCTAIREVSLLKNLKHANIVTLH 69 (288)
T ss_pred CccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc------------chhHHHHHHHHHhCCCCCEeeEE
Confidence 34455777799999999999999986 488999999864322110 22367899999999999999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEE
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
+++.+ ...++||||+. |+|.+++.... ..+++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||
T Consensus 70 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~Nil~~~~~~~kl 144 (288)
T cd07871 70 DIIHTERCLTLVFEYLD-SDLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHK--RKILHRDLKPQNLLINEKGELKL 144 (288)
T ss_pred EEEcCCCeEEEEEeCCC-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEE
Confidence 98776 67899999996 59999887643 357899999999999999999999 89999999999999999999999
Q ss_pred ccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cc
Q psy520 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QE 401 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~ 401 (455)
+|||+++...... .......||+.|+|||.+.+ .++.++||||+||++|||+||.+||...........+.. ..
T Consensus 145 ~DfG~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (288)
T cd07871 145 ADFGLARAKSVPT---KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLG 221 (288)
T ss_pred CcCcceeeccCCC---ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999987643321 11234568999999997643 478899999999999999999999987663322222211 11
Q ss_pred cchhhh-------------cchhhc--CC--ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 402 VPVREV-------------LDKEAG--EW--NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~~-------------~d~~~~--~~--~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.... ..+... .+ .....+....+||.+|+..||.+|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 111000 000000 00 01123456789999999999999999999875
No 40
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.5e-41 Score=324.37 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=199.3
Q ss_pred CcCCCcccccCCEEEEEEEEc----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||+|.++ .+..||+|.++.... .. ....|.+|+.++++++||||++++++
T Consensus 7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~------~~------~~~~~~~e~~~l~~l~h~~iv~~~~~ 74 (266)
T cd05064 7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS------DK------QRRGFLAEALTLGQFDHSNIVRLEGV 74 (266)
T ss_pred eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC------HH------HHHHHHHHHHHHhcCCCCCcCeEEEE
Confidence 456689999999999999864 256899999874321 10 13458899999999999999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.. ...++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ ++++||||||+|||++.++.+|++|
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~--~~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 75 ITRGNTMMIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSE--MGYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred EecCCCcEEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEeeccccHhhEEEcCCCcEEECC
Confidence 776 78899999999999999997643 368999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccch
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||.+........ .......++..|+|||.+ .+.++.++|||||||++||+++ |..||............... ..
T Consensus 151 fg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~- 226 (266)
T cd05064 151 FRRLQEDKSEAI--YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-FR- 226 (266)
T ss_pred Ccccccccccch--hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-CC-
Confidence 998765432211 111223456789999966 4567899999999999999875 99999876543322222111 00
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
...+..++..+.+++.+||..+|.+||+++++.+.|.+++
T Consensus 227 ---------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~~ 266 (266)
T cd05064 227 ---------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV 266 (266)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence 0112335566889999999999999999999999998763
No 41
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.4e-41 Score=327.90 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=194.9
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||+|+||.||+|.+. +|+.||||++........ .....+.+|+.++++++|+||+++++++.+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~il~~l~~~~iv~~~~~~~~ 71 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------KGEAMALNEKRILEKVNSRFVVSLAYAYET 71 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhh----------hhHHHHHHHHHHHHhcCCCcEEEEEEEEcc
Confidence 345589999999999999975 589999999865432111 012347899999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 72 ~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 72 KDALCLVLTIMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQR--ERIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred CCeEEEEEEecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 78899999999999998886533 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... ......||..|+|||++. +.++.++|||||||++|||++|+.||...+........... ..
T Consensus 149 ~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~------~~ 218 (285)
T cd05631 149 AVQIPEGE----TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR------VK 218 (285)
T ss_pred cEEcCCCC----eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH------hh
Confidence 87653321 123457999999999764 46789999999999999999999999875532111111000 00
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCC-----HHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
.. .......++..+.+|+.+||..||++||+ ++++++
T Consensus 219 ~~--~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 219 ED--QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cc--cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00 00011234556888999999999999997 788775
No 42
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.3e-41 Score=325.71 Aligned_cols=258 Identities=20% Similarity=0.251 Sum_probs=195.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|++++ ++.||||+++....... ....+.+|++++++++||||+++++++.+
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 71 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE-----------VKETTLRELKMLRTLKQENIVELKEAFRR 71 (287)
T ss_pred ceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccccc-----------chhhHHHHHHHHHhCCCccccchhhhEec
Confidence 5667899999999999999874 78999999975432111 13457899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||++++++..+... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 72 ~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 72 RGKLYLVFEYVEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHK--NDIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred CCEEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 788999999988777654433 3468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cccchhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~~~~ 406 (455)
+........ .......||+.|+|||++. ..++.++|+|||||++|||++|++||...........+.. ...+...
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
T cd07848 147 ARNLSEGSN--ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQ 224 (287)
T ss_pred ccccccccc--ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHH
Confidence 886543221 1123457899999999764 4678899999999999999999999987653221111111 1111000
Q ss_pred h----cch--------hhcC------CChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 V----LDK--------EAGE------WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~----~d~--------~~~~------~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. .++ .... ......+..+.+||.+|+..||++||+++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 225 MKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 000 0000 001124567899999999999999999999875
No 43
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.7e-41 Score=335.49 Aligned_cols=242 Identities=24% Similarity=0.379 Sum_probs=193.8
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||++..+ +|+.||||++........ .....+.+|+.+++.++||||+++++++.+ +..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 70 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAK----------DEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRL 70 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEE
Confidence 36999999999999976 489999999975432111 114557899999999999999999997776 788
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 71 ~lv~Ey~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~ 145 (328)
T cd05593 71 CFVMEYVNGGELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHS--GKIVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (328)
T ss_pred EEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence 999999999999998876 3468999999999999999999999 89999999999999999999999999998754
Q ss_pred cCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......||+.|+|||.+. +.++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p------- 215 (328)
T cd05593 146 ITDA---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP------- 215 (328)
T ss_pred CCcc---cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC-------
Confidence 3221 1123467999999999775 4678899999999999999999999987654332222221211111
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.+||.+||..||++|| ++.++++
T Consensus 216 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 216 -----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred -----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 12345578899999999999997 8888875
No 44
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=338.96 Aligned_cols=242 Identities=24% Similarity=0.364 Sum_probs=195.6
Q ss_pred cCCCcccccCCEEEEEEEEcC--CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.+.+.||+|+||.||+|.+++ +..||+|++........ .....+.+|+.+++.++||||+++++++.+
T Consensus 33 ~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 102 (340)
T PTZ00426 33 NFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQ----------KQVDHVFSERKILNYINHPFCVNLYGSFKD 102 (340)
T ss_pred EEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhCCCCCCcceEEEEEe
Confidence 445899999999999998654 36899999865332111 113458899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .||+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~ikL~DFG~ 177 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQS--LNIVYRDLKPENLLLDKDGFIKMTDFGF 177 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEECCCCCEEEecCCC
Confidence 788999999999999999987 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+...... .....||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+......++
T Consensus 178 a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p--- 248 (340)
T PTZ00426 178 AKVVDTR------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP--- 248 (340)
T ss_pred CeecCCC------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC---
Confidence 8765322 234579999999997754 578899999999999999999999987765444333332222111
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.++|.+|+..||.+|+ +++++++
T Consensus 249 ---------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 249 ---------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ---------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 12334478899999999999995 8888765
No 45
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.5e-41 Score=341.65 Aligned_cols=256 Identities=29% Similarity=0.467 Sum_probs=197.7
Q ss_pred cCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLL 245 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 245 (455)
++.+.||+|+||.||+|.+. ++..||||+++..... . ....+.+|+.+++.+ +|+||++++
T Consensus 41 ~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~-------~~~~~~~E~~il~~l~~h~nIv~~~ 108 (374)
T cd05106 41 QFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-----D-------EREALMSELKILSHLGQHKNIVNLL 108 (374)
T ss_pred eehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-----H-------HHHHHHHHHHHHHhhccCCceeeEe
Confidence 45599999999999999853 2357999999643220 1 134588999999999 899999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcCC--------------------------------------------------
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------------------------------------------- 274 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------- 274 (455)
+++.+ ...++||||+++|+|.+++.....
T Consensus 109 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (374)
T cd05106 109 GACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188 (374)
T ss_pred eEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence 98877 788999999999999999864321
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCC
Q psy520 275 -----------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 337 (455)
Q Consensus 275 -----------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 337 (455)
..++++.+++.++.|++.||.|||+ +|++||||||+|||+++++.+||+|||+++......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~--~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~ 266 (374)
T cd05106 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS--KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS 266 (374)
T ss_pred ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH--CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc
Confidence 1357889999999999999999999 899999999999999999999999999987654332
Q ss_pred cccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCC
Q psy520 338 MKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEW 415 (455)
Q Consensus 338 ~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 415 (455)
.. .......++..|+|||++ .+.++.++|||||||++|||++ |..||................. ...
T Consensus 267 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~----------~~~ 335 (374)
T cd05106 267 NY-VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY----------QMS 335 (374)
T ss_pred ce-eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc----------Ccc
Confidence 11 112233456789999965 4568999999999999999997 9999976543221111111110 000
Q ss_pred ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 416 NETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 416 ~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.+...+..+.+++.+|+..||.+||++.+|++.|++++
T Consensus 336 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 11123456888999999999999999999999999986
No 46
>KOG1026|consensus
Probab=100.00 E-value=4.7e-42 Score=356.27 Aligned_cols=253 Identities=29% Similarity=0.477 Sum_probs=208.1
Q ss_pred CCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 175 GNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+.||+|+||.||+|+.. +...||||.++..+. . -....|.+|++.+..++|||||+++|.|
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~------~------~~~~dF~REaeLla~l~H~nIVrLlGVC 558 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE------N------QARQDFRREAELLAELQHPNIVRLLGVC 558 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc------H------HHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 378999999999999853 246799999986543 1 0156699999999999999999999999
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEE
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNN-----------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL 316 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl 316 (455)
.+ +..|+|+|||..|+|.++|..... .++|+..+.+.||.|||.|+.||-+ +.+|||||-..|.||
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~--~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS--HHFVHRDLATRNCLV 636 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--Ccccccchhhhhcee
Confidence 88 778999999999999999975432 2348999999999999999999999 789999999999999
Q ss_pred CCCCceEEccccccccccCCCcccceeccCCCCCCcCCcc-cccCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHH
Q psy520 317 DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYY 394 (455)
Q Consensus 317 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE-~~~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~ 394 (455)
+++..|||+|||++|.....++.... ..-.-..+||||| ++.+++|++||||||||||||++| |+.||.+.......
T Consensus 637 ge~l~VKIsDfGLsRdiYssDYYk~~-~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI 715 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIYSSDYYKVR-GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI 715 (774)
T ss_pred ccceEEEecccccchhhhhhhhhccc-CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH
Confidence 99999999999999987665543211 1122356799999 678999999999999999999999 99999987755444
Q ss_pred HHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 395 YLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 395 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..+..+.. -..+..++..+.+|+..||+.+|++||+++||-.+|+...
T Consensus 716 e~i~~g~l-----------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 716 ECIRAGQL-----------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred HHHHcCCc-----------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 44332211 1134567777899999999999999999999999998753
No 47
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.3e-41 Score=334.59 Aligned_cols=251 Identities=23% Similarity=0.292 Sum_probs=198.6
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|++.. ++.||||+++...... ......+.+|+.++.+++||||+++++++.+
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~ 72 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----------LNEVRHVLTERDILTTTKSEWLVKLLYAFQD 72 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----------hhHHHHHHHHHHHHHhCCCCCCccEEEEEEc
Confidence 5566899999999999999874 8899999997542210 1114558899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.. ...+++.++..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kL~Dfg~ 147 (333)
T cd05600 73 DEYLYLAMEYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHE--LGYIHRDLKPENFLIDASGHIKLTDFGL 147 (333)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCCEEEEeCcC
Confidence 788999999999999999976 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++.... ......||+.|+|||++.+ .++.++|||||||++|||++|..||...........+......+
T Consensus 148 a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~---- 217 (333)
T cd05600 148 SKGIVT------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETL---- 217 (333)
T ss_pred Cccccc------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccc----
Confidence 876533 1234679999999997654 57889999999999999999999998765433222221111000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.......+...++..+.++|.+|+..+|.+||++.++++
T Consensus 218 ~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 218 QRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred cCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 000000011234556888999999988999999999985
No 48
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-40 Score=318.83 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=196.9
Q ss_pred cccccCCEEEEEEEEc---CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCcce
Q psy520 177 KLGEGQFGTVYYGKLK---NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNIMN 253 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 253 (455)
+||+|+||.||+|.++ ++..||+|+++..... ......|.+|+.+++++.||||+++++++.+...
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 70 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND-----------PALKDELLREANVMQQLDNPYIVRMIGICEAESW 70 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCc-----------HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCc
Confidence 5899999999999763 4788999998643210 0114568899999999999999999999888888
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+++..
T Consensus 71 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~ 145 (257)
T cd05116 71 MLVMELAELGPLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEE--TNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 145 (257)
T ss_pred EEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccchhhEEEcCCCeEEECCCcccccc
Confidence 999999999999999976 3468999999999999999999999 89999999999999999999999999998865
Q ss_pred cCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..............++..|+|||.+. +..+.++|+|||||++|||++ |..||...........+..... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~--~------ 217 (257)
T cd05116 146 GADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER--M------ 217 (257)
T ss_pred CCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--C------
Confidence 44322111112234467899999764 457889999999999999998 9999987654322222221110 0
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..+..++..+.++|.+||..||++||++++|.+.|++.
T Consensus 218 ---~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 218 ---ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ---CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 01123445688999999999999999999999999875
No 49
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.3e-40 Score=326.67 Aligned_cols=259 Identities=24% Similarity=0.336 Sum_probs=193.9
Q ss_pred CCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 169 KPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
...|++.++||+|+||.||+|+.+ +++.||||+++....... ...+.+|+.++++++||||++++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~niv~~~~~ 71 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT------------PFTAIREASLLKGLKHANIVLLHDI 71 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccccc------------chhHHHHHHHHhhCCCCCcCeEEEE
Confidence 345667799999999999999987 488999999864322110 2236789999999999999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|
T Consensus 72 ~~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kl~D 146 (303)
T cd07869 72 IHTKETLTLVFEYV-HTDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQ--RYILHRDLKPQNLLISDTGELKLAD 146 (303)
T ss_pred EecCCeEEEEEECC-CcCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECC
Confidence 877 7889999999 578888887642 468899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHH--HHHhccc
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY--LVVEQEV 402 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~--~~~~~~~ 402 (455)
||+++...... .......||+.|+|||++.+ .++.++|||||||++|||++|..||.......... .......
T Consensus 147 fg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 223 (303)
T cd07869 147 FGLARAKSVPS---HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGT 223 (303)
T ss_pred CCcceeccCCC---ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCC
Confidence 99987543221 11234568999999997644 46889999999999999999999998754321111 1000000
Q ss_pred chhh---------hcchh-h---------cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 PVRE---------VLDKE-A---------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~---------~~d~~-~---------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+... ...+. . ..+........+.+|+.+|+..||++|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 224 PNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 00000 0 00111122345788999999999999999999975
No 50
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.1e-41 Score=329.75 Aligned_cols=255 Identities=24% Similarity=0.378 Sum_probs=198.5
Q ss_pred CcCCCcccccCCEEEEEEEEcC-Cc----EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
|++.+.||+|+||.||+|.+.. +. .||||+++.... . .....|.+|+.+++.++||||+++++
T Consensus 9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~l~~l~h~niv~~~g 76 (316)
T cd05108 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------P------KANKEILDEAYVMASVDNPHVCRLLG 76 (316)
T ss_pred ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC------H------HHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3455899999999999998743 33 489999863221 0 01345889999999999999999999
Q ss_pred cccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 247 FCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 247 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+|.....+++++|+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++++||||||+|||++.++.+||+|
T Consensus 77 ~~~~~~~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~--~~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 77 ICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEE--RRLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred EEcCCCceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHh--cCeeccccchhheEecCCCcEEEcc
Confidence 998878899999999999999998643 358899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccch
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||+++....... ........++..|+|||.+ .+.++.++|||||||++|||++ |..||............... ...
T Consensus 153 fG~a~~~~~~~~-~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~ 230 (316)
T cd05108 153 FGLAKLLGADEK-EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERL 230 (316)
T ss_pred ccccccccCCCc-ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-CCC
Confidence 999987654321 1112223456789999966 4567899999999999999998 99999876533222211111 110
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+..++..+.+++.+|+..+|.+||++.+++..|.++.+
T Consensus 231 ----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 ----------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred ----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 0011233447788999999999999999999999988764
No 51
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7.9e-41 Score=331.39 Aligned_cols=243 Identities=23% Similarity=0.311 Sum_probs=192.2
Q ss_pred CcccccCCEEEEEEEEc----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 176 NKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++||+|+||.||++... +++.||||+++....... ......+.+|+.++++++||||+++++++..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~---------~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~ 72 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRN---------QKDTAHTKAERNILEAVKHPFIVDLIYAFQTG 72 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhh---------hhhHHHHHHHHHHHHhCCCCchhceeeEEecC
Confidence 67999999999999863 478999999975332111 0113457789999999999999999997766
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 73 GKLYLILEYLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQ--QGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred CeEEEEEeCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 788999999999999999976 3468899999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
+...... .......||+.|+|||++.+ ..+.++|||||||++|||++|..||...........+......++
T Consensus 148 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~---- 220 (323)
T cd05584 148 KESIHEG---TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP---- 220 (323)
T ss_pred eecccCC---CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 7543221 11234679999999997754 568899999999999999999999987654322222221211111
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.+||.+|+..+|++|| ++.++++
T Consensus 221 --------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 221 --------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 12344578999999999999999 7887765
No 52
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.8e-40 Score=320.43 Aligned_cols=255 Identities=22% Similarity=0.407 Sum_probs=198.2
Q ss_pred cCCCcccccCCEEEEEEEEcC-Cc----EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
++.+.||+|+||+||+|.+.. +. .|++|++..... . .....+..|+.+++++.||||++++++
T Consensus 10 ~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~~~~~l~~l~h~~iv~~~~~ 77 (279)
T cd05111 10 RKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG------R------QTFQEITDHMLAMGSLDHAYIVRLLGI 77 (279)
T ss_pred eeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc------h------HHHHHHHHHHHHHhcCCCCCcceEEEE
Confidence 455899999999999999753 44 467777642111 0 013457788999999999999999999
Q ss_pred ccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+.+...++++||+++|+|.+++.... ..+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+||
T Consensus 78 ~~~~~~~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~kl~Df 153 (279)
T cd05111 78 CPGASLQLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEE--HRMVHRNLAARNILLKSDSIVQIADF 153 (279)
T ss_pred ECCCccEEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEEcCCCcEEEcCC
Confidence 88777889999999999999997643 368999999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++...... .........++..|+|||.+ .+.++.++|||||||++||+++ |..||..................
T Consensus 154 g~~~~~~~~~-~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-- 230 (279)
T cd05111 154 GVADLLYPDD-KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERL-- 230 (279)
T ss_pred ccceeccCCC-cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC--
Confidence 9998654332 11122345677889999966 4568899999999999999998 99999876543322222211110
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhcC
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
..+..++..+.+++.+||..+|.+||++.++++.|..+.++
T Consensus 231 ---------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 231 ---------AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 01112233467789999999999999999999999887653
No 53
>KOG0201|consensus
Probab=100.00 E-value=4.2e-42 Score=332.30 Aligned_cols=242 Identities=28% Similarity=0.393 Sum_probs=200.1
Q ss_pred CCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cc
Q psy520 175 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
..+||+|+||.||+|.+.. ++.||+|++...... + .++...+|+.+|.+|+++||.+.|+.+.. ..
T Consensus 18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-----d-------eIediqqei~~Ls~~~~~~it~yygsyl~g~~ 85 (467)
T KOG0201|consen 18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-----D-------EIEDIQQEISVLSQCDSPNITEYYGSYLKGTK 85 (467)
T ss_pred chhccccccceeeeeeeccccceEEEEEechhhcc-----h-------hhHHHHHHHHHHHhcCcchHHhhhhheeeccc
Confidence 3889999999999999864 889999999754331 1 25558899999999999999999996655 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.+++||||.||++.+.|.. +..+.+..+..|+.+++.|+.|||. ++.+|||||++|||+..+|.+|++|||.+-.
T Consensus 86 LwiiMey~~gGsv~~lL~~---~~~~~E~~i~~ilre~l~~l~ylH~--~~kiHrDIKaanil~s~~g~vkl~DfgVa~q 160 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKS---GNILDEFEIAVILREVLKGLDYLHS--EKKIHRDIKAANILLSESGDVKLADFGVAGQ 160 (467)
T ss_pred HHHHHHHhcCcchhhhhcc---CCCCccceeeeehHHHHHHhhhhhh--cceecccccccceeEeccCcEEEEecceeee
Confidence 8999999999999999987 4456889999999999999999999 8899999999999999999999999999876
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
...... ...+++||+-|||||++.+ .++.|+||||||++.+||++|.+|+.+..+....+.+..... +
T Consensus 161 l~~~~~---rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~P-------P- 229 (467)
T KOG0201|consen 161 LTNTVK---RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAP-------P- 229 (467)
T ss_pred eechhh---ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCC-------C-
Confidence 654332 2357899999999998866 789999999999999999999999988765322222211111 1
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.-...++..+++|+..|+..||+.||++.++++
T Consensus 230 ---~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 230 ---RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ---ccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 111245667999999999999999999999986
No 54
>KOG0194|consensus
Probab=100.00 E-value=3.1e-41 Score=339.67 Aligned_cols=253 Identities=29% Similarity=0.407 Sum_probs=202.9
Q ss_pred CCcccccCCEEEEEEEEcC--C--cE-EEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 175 GNKLGEGQFGTVYYGKLKN--G--ME-IAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~--~--~~-vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
+++||+|+||.||+|+++. + .. ||||..+.... .....+..|.+|.+++++++|||||++||++.
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~----------~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE----------LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeeccccc----------ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 4899999999999999763 2 23 89999874221 11223677999999999999999999999988
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ..+++|||+|.||+|.++|.+..+ .++..++..++.++|.||+|||+ +++|||||-..|+|++.++.+||+|||
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~--k~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHS--KNCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHH--CCCcchhHhHHHheecCCCeEEeCccc
Confidence 7 777899999999999999998543 69999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+++...... .......-...|+|||.+ .+-++.++|||||||++||+++ |..||.+.........+......
T Consensus 308 Ls~~~~~~~---~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r--- 381 (474)
T KOG0194|consen 308 LSRAGSQYV---MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYR--- 381 (474)
T ss_pred cccCCccee---eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCcc---
Confidence 988654211 111111345679999966 5568999999999999999999 89999988755443333221111
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
...+...+..+..++.+||..+|++||+|.++.+.|+.+.+
T Consensus 382 -------~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 382 -------MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred -------CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 11122455667888899999999999999999999988754
No 55
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-40 Score=322.28 Aligned_cols=254 Identities=28% Similarity=0.480 Sum_probs=200.2
Q ss_pred cCCCcccccCCEEEEEEEEcC-C-----cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-G-----MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~-----~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++.+.||+|+||.||+|.+.. + ..||+|.++.... . .....|.+|+.++.+++||||+++++
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~------~------~~~~~~~~ei~~l~~l~h~~i~~~~~ 75 (283)
T cd05048 8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE------P------KVQQEFRQEAELMSDLQHPNIVCLLG 75 (283)
T ss_pred chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC------H------HHHHHHHHHHHHHHhcCCcccceEEE
Confidence 455899999999999998753 2 5799999863321 1 11345889999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCC
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 312 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~ 312 (455)
++.+ ...|++|||+++|+|.+++..... ...+++..+..++.|++.||.|||+ ++++||||||+
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~ 153 (283)
T cd05048 76 VCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS--HHFVHRDLAAR 153 (283)
T ss_pred EEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccccc
Confidence 8877 788999999999999999976421 1458899999999999999999999 88999999999
Q ss_pred cEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCch
Q psy520 313 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNT 390 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~ 390 (455)
||++++++.+||+|||+++....... ........+++.|+|||.+ .+.++.++|||||||++|||++ |..||.....
T Consensus 154 Nil~~~~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05048 154 NCLVGEGLTVKISDFGLSRDIYSADY-YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232 (283)
T ss_pred eEEEcCCCcEEECCCcceeecccccc-ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999999876543221 1122344678889999965 4578999999999999999998 9999987654
Q ss_pred hhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
......+.... .. ..+..++..+.+|+.+|+..+|++||++.+|++.|+++
T Consensus 233 ~~~~~~i~~~~--~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 233 QEVIEMIRSRQ--LL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHHHHcCC--cC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 33222221111 00 11234556788999999999999999999999999863
No 56
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.1e-40 Score=315.55 Aligned_cols=255 Identities=26% Similarity=0.362 Sum_probs=203.8
Q ss_pred CCCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
..|++.++||+|+||.||+|+++++..||+|+++.... ....|.+|++++++++||||+++++++.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--------------~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 71 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--------------SPEAFLQEAQVMKKLRHEKLVQLYAVVS 71 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--------------CHHHHHHHHHHHHhCCCCCcceEEEEEC
Confidence 34677899999999999999987667899999864221 0234889999999999999999999877
Q ss_pred CcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 250 NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 250 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+...++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||.
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~Nill~~~~~~~L~dfg~ 148 (262)
T cd05071 72 EEPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGL 148 (262)
T ss_pred CCCcEEEEEcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcccEEEcCCCcEEeccCCc
Confidence 777899999999999999997632 3457999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... .......++..|+|||.. .+.++.++|+||||+++|||+| |..||............... ...
T Consensus 149 ~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~--- 222 (262)
T cd05071 149 ARLIEDNEY--TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRM--- 222 (262)
T ss_pred eeecccccc--ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-CCC---
Confidence 876543321 112234567789999965 4568999999999999999999 89999766533222222111 000
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.....++..+.+++.+|+..+|.+||++.++++.|++.++
T Consensus 223 -------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~ 262 (262)
T cd05071 223 -------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 262 (262)
T ss_pred -------CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhcC
Confidence 0112345568899999999999999999999999998764
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.4e-40 Score=329.00 Aligned_cols=255 Identities=25% Similarity=0.326 Sum_probs=197.3
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.++. +..||+|.+..... . .....+.+|++++++++||||+++++++.+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (331)
T cd06649 7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK------P------AIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (331)
T ss_pred ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC------H------HHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 4566899999999999999874 78899999864321 0 114568999999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 75 DGEISICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAYLREK-HQIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred CCEEEEEeecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhhc-CCEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 7889999999999999999763 4589999999999999999999972 3699999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc----ccc-
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ----EVP- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~----~~~- 403 (455)
+....... .....||+.|+|||++.+ .++.++|||||||++|||++|+.||...+........... ...
T Consensus 151 ~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 225 (331)
T cd06649 151 SGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGE 225 (331)
T ss_pred cccccccc-----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCC
Confidence 87553321 234579999999997754 5788999999999999999999999765532222111000 000
Q ss_pred ---------------------------hhhhcchh----hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 ---------------------------VREVLDKE----AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ---------------------------~~~~~d~~----~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+..+.. ....+...++..+.+||.+||..||++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 226 PHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred ccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 011112245667899999999999999999999976
No 58
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.3e-40 Score=329.54 Aligned_cols=237 Identities=27% Similarity=0.352 Sum_probs=189.5
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||+||+|.++. ++.||||+++....... .....+..|..++..+ +||||+++++++.+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 70 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQD----------DDVECTMTEKRILSLARNHPFLTQLYCCFQTPDR 70 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhc----------cHHHHHHHHHHHHHhccCCCchhceeeEEEcCCE
Confidence 369999999999999874 78999999975422111 1134577888888876 69999999998777 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~iv~Ey~~~g~L~~~i~~~---~~l~~~~~~~~~~ql~~~L~~lH~--~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~ 145 (320)
T cd05590 71 LFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEITSALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 145 (320)
T ss_pred EEEEEcCCCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEECCCCcEEEeeCCCCee
Confidence 89999999999999998773 468999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...+.......+.......+
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~------ 216 (320)
T cd05590 146 GIFNG---KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP------ 216 (320)
T ss_pred cCcCC---CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC------
Confidence 43221 12345679999999997754 578899999999999999999999987764433333322221111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
..++..+.++|.+|+..||.+||++
T Consensus 217 ------~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 217 ------TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred ------CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1234557889999999999999998
No 59
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.8e-40 Score=336.32 Aligned_cols=259 Identities=26% Similarity=0.382 Sum_probs=200.5
Q ss_pred CCcCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceec
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~ 243 (455)
.++++++||+|+||.||+|++.. +..||||+++..... . ..+.|.+|+++++++. ||||++
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-----~-------~~~~~~~Ei~~l~~l~~HpnIv~ 105 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS-----S-------EKQALMSELKIMTHLGPHLNIVN 105 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh-----H-------HHHHHHHHHHHHHhcCCCCCeee
Confidence 34667999999999999998631 346999999643220 1 1345899999999996 999999
Q ss_pred ccccccC-cceeEEEEeccCCCHHHHHhhcCC------------------------------------------------
Q psy520 244 LLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN------------------------------------------------ 274 (455)
Q Consensus 244 l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------ 274 (455)
+++++.+ ...|+|||||++|+|.+++.....
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
T cd05105 106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT 185 (400)
T ss_pred EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence 9999877 788999999999999998865321
Q ss_pred ---------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCC
Q psy520 275 ---------------------------------------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 309 (455)
Q Consensus 275 ---------------------------------------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Di 309 (455)
...+++..+..++.|++.||.|||+ .+++||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivH~di 263 (400)
T cd05105 186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS--KNCVHRDL 263 (400)
T ss_pred cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCC
Confidence 1347888999999999999999999 88999999
Q ss_pred CCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q psy520 310 KSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDD 387 (455)
Q Consensus 310 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~ 387 (455)
||+|||++.++.+||+|||+++........ .......++..|+|||.+ .+.++.++|||||||++|||++ |..||..
T Consensus 264 kp~Nill~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~ 342 (400)
T cd05105 264 AARNVLLAQGKIVKICDFGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPG 342 (400)
T ss_pred ChHhEEEeCCCEEEEEeCCcceeccccccc-cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcc
Confidence 999999999999999999998865432211 112234577889999966 4467899999999999999997 9999976
Q ss_pred CchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 388 NNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
................. ..+..++..+.+++.+||..+|++||++.+|.+.|++++.
T Consensus 343 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 343 MIVDSTFYNKIKSGYRM----------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred cchhHHHHHHHhcCCCC----------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 54222111111111110 0112345668899999999999999999999999998864
No 60
>KOG0611|consensus
Probab=100.00 E-value=3.7e-41 Score=321.60 Aligned_cols=249 Identities=24% Similarity=0.418 Sum_probs=206.9
Q ss_pred CCCCCcCCCcccccCCEEEEEEEE-cCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 168 RKPYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 168 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
.+-+|++.+.||+|+||.|-++.. +.|+.||||.++++..... + . .....+|++||+.++||||+.+|.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkde---q---D----lvhIRREIeIMSsLNHPhII~IyE 120 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDE---Q---D----LVHIRREIEIMSSLNHPHIIQIYE 120 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccH---H---H----HHHHHHHHHHHhhcCCCceeehhh
Confidence 344567778999999999999986 4599999999987765221 1 1 445789999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEc
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
.+.+ +...|||||..+|.|+|++... ..|++..+..++.||..|+.|+|. ++++|||||.+|||+|.|+.+||+
T Consensus 121 VFENkdKIvivMEYaS~GeLYDYiSer---~~LsErEaRhfFRQIvSAVhYCHk--nrVvHRDLKLENILLD~N~NiKIA 195 (668)
T KOG0611|consen 121 VFENKDKIVIVMEYASGGELYDYISER---GSLSEREARHFFRQIVSAVHYCHK--NRVVHRDLKLENILLDQNNNIKIA 195 (668)
T ss_pred hhcCCceEEEEEEecCCccHHHHHHHh---ccccHHHHHHHHHHHHHHHHHHhh--ccceecccchhheeecCCCCeeee
Confidence 9888 8899999999999999999984 459999999999999999999999 889999999999999999999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccCCC--CChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
|||++..+.... ..++++|++-|.+||++.|.. .+.+|.|||||+||-|..|..||++.+...+...+..+.
T Consensus 196 DFGLSNly~~~k----fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~Ga-- 269 (668)
T KOG0611|consen 196 DFGLSNLYADKK----FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGA-- 269 (668)
T ss_pred ccchhhhhcccc----HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccc--
Confidence 999998776543 245789999999999998864 679999999999999999999999987655444443221
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+.+..-+....-||..||..+|++|.|+.+|...
T Consensus 270 -----------YrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 270 -----------YREPETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred -----------ccCCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1111122234556889999999999999998764
No 61
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.5e-40 Score=329.01 Aligned_cols=242 Identities=25% Similarity=0.346 Sum_probs=192.3
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
++||+|+||.||+|+++. ++.||||+++....... .....+..|.+++..+ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~ 70 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQD----------DDVDCTMTEKRILALAAKHPFLTALHCCFQTKDR 70 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhh----------hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCe
Confidence 369999999999999874 78999999975432111 1134577889998866 79999999998877 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~E~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~ 145 (321)
T cd05591 71 LFFVMEYVNGGDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHR--HGVIYRDLKLDNILLDAEGHCKLADFGMCKE 145 (321)
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEeeccccee
Confidence 89999999999999998763 468999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+.......+
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p------ 216 (321)
T cd05591 146 GILNG---VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP------ 216 (321)
T ss_pred cccCC---ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC------
Confidence 43221 11234679999999997754 578899999999999999999999987764433333322221111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCC-------CHHHHHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRA-------SMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-------s~~evl~ 447 (455)
..++..+.++|.+|+..||++|| ++.++++
T Consensus 217 ------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 217 ------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 12344578899999999999999 7777764
No 62
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3e-40 Score=316.28 Aligned_cols=251 Identities=26% Similarity=0.403 Sum_probs=200.0
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
|++.++||+|+||.||+|...+++.||+|.+..... ....+.+|+.++++++|+||+++++.+.+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05072 8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--------------SVQAFLEEANLMKTLQHDKLVRLYAVVTKE 73 (261)
T ss_pred eEEeeecCCcCCceEEEEEecCCceEEEEEccCCch--------------hHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 456689999999999999988788899999753211 13458899999999999999999997766
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...+++|||+++++|.+++.... ...+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 74 EPIYIITEYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIER--KNYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred CCcEEEEecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEecCCCcEEECCCccc
Confidence 77899999999999999997643 3468999999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... .......++..|+|||.+. +.++.++|||||||++|+|+| |..||............... ...
T Consensus 151 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~---- 223 (261)
T cd05072 151 RVIEDNEY--TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRM---- 223 (261)
T ss_pred eecCCCce--eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCC----
Confidence 86543221 1122345677899999664 467889999999999999998 99999765533222222111 100
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
.....++..+.+++.+||..+|++||+++++.+.|+++
T Consensus 224 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 ------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 01112445588899999999999999999999999864
No 63
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.1e-40 Score=327.42 Aligned_cols=241 Identities=25% Similarity=0.359 Sum_probs=188.5
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHc-CCCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++. ++.||||+++........ ....+..|..++.. .+||||+++++++.. ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~----------~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~ 70 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDD----------DVECTMVERRVLALAWEHPFLTHLFCTFQTKEH 70 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhh----------hHHHHHHHHHHHHhccCCCCccceeeEEEcCCE
Confidence 369999999999999864 788999999754321110 12335567777765 489999999998766 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||++||+|.+++.. ...+++.++..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~gg~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~--~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~ 145 (316)
T cd05592 71 LFFVMEYLNGGDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHK--KGIIYRDLKLDNVLLDKDGHIKIADFGMCKE 145 (316)
T ss_pred EEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHeEECCCCCEEEccCcCCeE
Confidence 8999999999999999876 3468999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...+.......+......+
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~------- 215 (316)
T cd05592 146 NMNGE---GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHF------- 215 (316)
T ss_pred CCCCC---CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-------
Confidence 43322 12345679999999997754 57889999999999999999999998766433322222111111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHH-HHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR-DIV 446 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~-evl 446 (455)
+..++..+.+||.+||..+|.+||++. +++
T Consensus 216 -----~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 216 -----PRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred -----CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 122344578899999999999999875 443
No 64
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2e-40 Score=328.65 Aligned_cols=245 Identities=24% Similarity=0.355 Sum_probs=189.9
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHH---HHcCCCcceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT---LSQCKHVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~---l~~l~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||+|.++ +++.||||+++....... . ....+.+|+.+ +++++||||++++++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~---~-------~~~~l~~e~~~~~~~~~l~hp~i~~~~~~ 70 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIAR---D-------EVESLMCEKRIFETANSERHPFLVNLFAC 70 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh---h-------HHHHHHHHHHHHHhccccCCCChhceeeE
Confidence 345689999999999999986 489999999975432111 0 12335556554 467789999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...|+||||+++|+|..++.. ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++.+||+|
T Consensus 71 ~~~~~~~~lv~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~--~~ivHrdlkp~Nill~~~~~~kL~D 144 (324)
T cd05589 71 FQTEDHVCFVMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHE--NKIVYRDLKLDNLLLDTEGFVKIAD 144 (324)
T ss_pred EEcCCEEEEEEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEECCCCcEEeCc
Confidence 877 788999999999999988764 369999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
||+++...... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...........+.......
T Consensus 145 fg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~- 220 (324)
T cd05589 145 FGLCKEGMGFG---DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRY- 220 (324)
T ss_pred ccCCccCCCCC---CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-
Confidence 99987533221 12345679999999997654 57889999999999999999999998765433322222211111
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
+..++..+.++|.+||..||.+|| ++.++++
T Consensus 221 -----------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 221 -----------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 122345578899999999999999 4666554
No 65
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.5e-40 Score=329.68 Aligned_cols=243 Identities=24% Similarity=0.362 Sum_probs=192.9
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||++..+ +|+.||+|+++....... .....+.+|++++..++||||+++++++.+ ...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~----------~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~ 70 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL 70 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEE
Confidence 36999999999999976 488999999975432110 113457789999999999999999987766 788
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +||+||||||+|||++.++.+||+|||+++..
T Consensus 71 ~lv~E~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~-~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 71 CFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred EEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 999999999999998876 34689999999999999999999962 58999999999999999999999999998754
Q ss_pred cCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......||+.|+|||++. +.++.++|||||||++|||+||..||...........+......++
T Consensus 147 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p------- 216 (325)
T cd05594 147 IKDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP------- 216 (325)
T ss_pred CCCC---cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC-------
Confidence 3221 1123457999999999774 4678999999999999999999999987654333332222222211
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.+||.+||..||++|+ ++.++++
T Consensus 217 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 217 -----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred -----CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 12344578899999999999996 8888874
No 66
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=8.1e-40 Score=312.62 Aligned_cols=247 Identities=25% Similarity=0.421 Sum_probs=195.8
Q ss_pred cCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
++.+.||+|+||.||++.++++..+|+|.+..... ....|.+|+.++++++||||+++++++.+ .
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 72 (256)
T cd05114 7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK 72 (256)
T ss_pred EEeeEecCCcCceEEEEEeccCceEEEEecccCCc--------------cHHHHHHHHHHHHHCCCCCceeEEEEEccCC
Confidence 44588999999999999998777899998753321 02348899999999999999999998877 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++|+|.+++.... ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||+++
T Consensus 73 ~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 73 PLYIVTEFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLER--NSFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred CEEEEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcceEEEcCCCeEEECCCCCcc
Confidence 8899999999999999987533 358999999999999999999999 899999999999999999999999999987
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||.+. ..++.++|+||||+++|||++ |+.||...+.......+......
T Consensus 149 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~------ 220 (256)
T cd05114 149 YVLDDEYT--SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL------ 220 (256)
T ss_pred ccCCCcee--ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC------
Confidence 65332211 112234566899999775 457889999999999999999 99999876643322222211100
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..+...+..+.+++.+||..+|++||+++++++.|.
T Consensus 221 -----~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 221 -----YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011122345788999999999999999999998873
No 67
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.6e-40 Score=319.02 Aligned_cols=258 Identities=22% Similarity=0.338 Sum_probs=191.6
Q ss_pred CCcCCCcccccCCEEEEEEEEc--CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC---CCcceeccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK--NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC---KHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~ 245 (455)
.|++.+.||+|+||.||+|.+. +++.||||+++........ ...+.+|+.+++.+ +||||++++
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~e~~~l~~l~~~~hpniv~~~ 70 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM-----------PLSTIREVAVLRHLETFEHPNVVRLF 70 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc-----------hHHHHHHHHHHHhhcccCCCCcceEE
Confidence 3567799999999999999874 3688999998754321110 12355677666655 799999999
Q ss_pred cccc------CcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC
Q psy520 246 GFCN------NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 246 ~~~~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
+++. +...++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+ ++++||||||+|||++.+
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~--~~iiH~dlkp~Nil~~~~ 146 (290)
T cd07862 71 DVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSS 146 (290)
T ss_pred EEEecccCCCCCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEEcCC
Confidence 9763 256789999995 79999987643 2458999999999999999999999 899999999999999999
Q ss_pred CceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHH
Q psy520 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
+.+||+|||+++...... ......||+.|+|||.+ ...++.++|||||||++|||++|.+||...........+.
T Consensus 147 ~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~ 222 (290)
T cd07862 147 GQIKLADFGLARIYSFQM----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 222 (290)
T ss_pred CCEEEccccceEeccCCc----ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHH
Confidence 999999999987654321 23346789999999976 4467889999999999999999999998766432222221
Q ss_pred h-cccchhhh-----------cchhhcCCC---hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 399 E-QEVPVREV-----------LDKEAGEWN---ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~-~~~~~~~~-----------~d~~~~~~~---~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ...+.... +........ ...++..+.+|+.+||..||++||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 223 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 1 00000000 000000000 0134566889999999999999999999875
No 68
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.8e-40 Score=326.81 Aligned_cols=242 Identities=27% Similarity=0.378 Sum_probs=192.5
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||+||+|.++. ++.||||++++...... .....+..|..++..+ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~ 70 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQD----------DDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDR 70 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCE
Confidence 369999999999999874 78999999975432111 1134477889999888 79999999998776 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++.++..++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 145 (318)
T cd05570 71 LFFVMEYVNGGDLMFHIQRS---GRFDEPRARFYAAEIVLGLQFLHE--RGIIYRDLKLDNVLLDSEGHIKIADFGMCKE 145 (318)
T ss_pred EEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEccCCCHHHeEECCCCcEEecccCCCee
Confidence 89999999999999998773 469999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|+|||||++|+|++|..||...........+.......
T Consensus 146 ~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~------- 215 (318)
T cd05570 146 GILGG---VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRY------- 215 (318)
T ss_pred cCcCC---CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-------
Confidence 32221 11234579999999997754 67889999999999999999999998765433322222111111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCH-----HHHHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASM-----RDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~-----~evl~ 447 (455)
+..++..+.+||.+||..||++||++ .++++
T Consensus 216 -----~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 216 -----PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -----CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 12234568899999999999999999 77754
No 69
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=6.5e-40 Score=314.00 Aligned_cols=250 Identities=21% Similarity=0.356 Sum_probs=195.0
Q ss_pred cccccCCEEEEEEEEc---CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCcce
Q psy520 177 KLGEGQFGTVYYGKLK---NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNIMN 253 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 253 (455)
.||+|+||.||+|.+. ++..||+|++..... . .....|.+|+.++++++||||+++++++.....
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~ 69 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE------K------SVRDEMMREAEIMHQLDNPYIVRMIGVCEAEAL 69 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC------h------HHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCe
Confidence 4899999999999874 255799999864321 0 013458899999999999999999999877888
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++++|.+++... ...+++..++.++.|++.||.|||+ +|++||||||+||+++.++.+||+|||+++..
T Consensus 70 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 145 (257)
T cd05115 70 MLVMEMASGGPLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEG--KNFVHRDLAARNVLLVNQHYAKISDFGLSKAL 145 (257)
T ss_pred EEEEEeCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh--cCeeecccchheEEEcCCCcEEeccCCccccc
Confidence 9999999999999998753 2468999999999999999999999 89999999999999999999999999998755
Q ss_pred cCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..............++..|+|||.+. +.++.++|||||||++||+++ |..||.................
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------- 216 (257)
T cd05115 146 GADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR--------- 216 (257)
T ss_pred cCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC---------
Confidence 43321111111223457899999664 467889999999999999996 9999987654332222211110
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
...+..++..+.+++.+||..+|++||++.+|.+.|+.+.
T Consensus 217 --~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 217 --LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 0011223456788999999999999999999999998763
No 70
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.3e-40 Score=335.59 Aligned_cols=253 Identities=23% Similarity=0.254 Sum_probs=191.5
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||+|++.. ++.||||++....... ......+.+|+.++++++||||+++++++.+
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~----------~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~ 72 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN----------RNQVAHVKAERDILAEADNEWVVKLYYSFQD 72 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hHHHHHHHHHHHHHHhcCCCCeeeeEEEEec
Confidence 4566899999999999998864 7899999997533211 0114558899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||++||+|.+++... ..+++..+..++.|++.||.|||+ .||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~~LH~--~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 73 KDNLYFVMDYIPGGDMMSLLIRM---EVFPEVLARFYIAELTLAIESVHK--MGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 7889999999999999999873 468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcc--------------------------------------------cceeccCCCCCCcCCccccc-CCCCC
Q psy520 330 VKMSETSNMK--------------------------------------------TMYTENLTGTRPYMPPEAMH-CQIST 364 (455)
Q Consensus 330 a~~~~~~~~~--------------------------------------------~~~~~~~~gt~~Y~aPE~~~-~~~s~ 364 (455)
++........ ........||+.|+|||++. ..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 7643110000 00112357999999999764 45788
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhccc--CcCCCCCH
Q psy520 365 KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVF--EKDKRASM 442 (455)
Q Consensus 365 ~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~--dp~~RPs~ 442 (455)
++|||||||++|||+||..||...........+......+ .......++..+.+||.++|.. ++..||++
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTL--------HIPPQVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccccc--------CCCCCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 9999999999999999999998765432222221111000 0001112344577778775544 45669999
Q ss_pred HHHHH
Q psy520 443 RDIVD 447 (455)
Q Consensus 443 ~evl~ 447 (455)
+++++
T Consensus 300 ~~~l~ 304 (381)
T cd05626 300 DDIKA 304 (381)
T ss_pred HHHhc
Confidence 99975
No 71
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.3e-40 Score=325.98 Aligned_cols=241 Identities=25% Similarity=0.347 Sum_probs=189.1
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|+++. |+.||||+++....... . ....+..|..++... +||||+++++++.+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---~-------~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 70 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLID---D-------DVECTMVEKRVLALAWENPFLTHLYCTFQTKEH 70 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhc---c-------hHHHHHHHHHHHHhccCCCCccCeeEEEEeCCE
Confidence 469999999999999874 88999999975432111 0 123466788888754 89999999998777 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+.+|+|.+++.. ...+++.++..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05620 71 LFFVMEFLNGGDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHS--KGIIYRDLKLDNVMLDRDGHIKIADFGMCKE 145 (316)
T ss_pred EEEEECCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence 8999999999999999876 3468999999999999999999999 8999999999999999999999999999874
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~------ 216 (316)
T cd05620 146 NVFGD---NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP------ 216 (316)
T ss_pred cccCC---CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC------
Confidence 32211 12345679999999997754 578899999999999999999999987654332222211111111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHH-HHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR-DIV 446 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~-evl 446 (455)
..++..+.+||.+||..||++||++. ++.
T Consensus 217 ------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 217 ------RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 12344578899999999999999984 554
No 72
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-40 Score=333.40 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=198.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||+|++. +++.||||+++....... .....+..|+.++..++||||+++++++.+
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 72 (350)
T cd05573 3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKR----------NQIAHVRAERDILADADSPWIVKLYYSFQD 72 (350)
T ss_pred ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhc----------cHHHHHHHHHHHHHhcCCCCccchhhheec
Confidence 556689999999999999987 489999999975432110 114558899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++++|.+++... ..+++..+..++.|++.||.|||+ +|++||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~--~giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 73 EEHLYLVMEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHK--LGFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred CCeEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEeecCCC
Confidence 7889999999999999999874 468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCc--------------------------ccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCC
Q psy520 330 VKMSETSNM--------------------------KTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGM 382 (455)
Q Consensus 330 a~~~~~~~~--------------------------~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~ 382 (455)
+........ .........||+.|+|||++.+ .++.++|||||||++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 227 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGF 227 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCC
Confidence 876543320 0011234579999999997654 5788999999999999999999
Q ss_pred CCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC-HHHHHH
Q psy520 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-MRDIVD 447 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-~~evl~ 447 (455)
.||...........+....... .......++..+.+||.+|+. +|.+||+ ++++++
T Consensus 228 ~Pf~~~~~~~~~~~i~~~~~~~--------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 228 PPFYSDTLQETYNKIINWKESL--------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CCCCCCCHHHHHHHHhccCCcc--------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 9998776433332222100000 000111145568888999987 9999999 999976
No 73
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.4e-40 Score=313.21 Aligned_cols=250 Identities=27% Similarity=0.391 Sum_probs=199.8
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNI 251 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
|++.++||+|+||.||+|.++++..||+|.++.... . ...|.+|+.++++++|+|++++++++.+.
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~------~--------~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 73 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM------S--------PESFLEEAQIMKKLRHDKLVQLYAVVSEE 73 (260)
T ss_pred hhhhheeccccCceEEEEEecCCceeEEEEecCCCC------C--------HHHHHHHHHHHHhcCCCceEEEEeEECCC
Confidence 456689999999999999988778899999864322 0 23488999999999999999999988777
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..+++|||+++++|.+++.... ...+++.++..++.+++.||.|||+ ++++||||||+||++++++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 74 PIYIVTEYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIER--MNYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCccceEEEeCCceEEeCCceeee
Confidence 8899999999999999987633 3458999999999999999999999 889999999999999999999999999987
Q ss_pred cccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... .......++..|+|||.+ .+.++.++|+||||+++|||++ |..||............... ..
T Consensus 151 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~------ 221 (260)
T cd05070 151 LIEDNEY--TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YR------ 221 (260)
T ss_pred eccCccc--ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CC------
Confidence 6543221 112233456789999965 4467889999999999999999 99999765532222221111 00
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
...+...+..+.+|+.+|+..+|.+||++.++.+.|++
T Consensus 222 ----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 ----MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ----CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00112344568899999999999999999999999976
No 74
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-40 Score=329.52 Aligned_cols=248 Identities=22% Similarity=0.279 Sum_probs=192.5
Q ss_pred CcCCCcccccCCEEEEEEEEc----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
|++.++||+|+||.||+++.. +++.||+|++.+...... ......+..|+.++.++ +|+||+++++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~~~~~i~~~~~ 72 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQK---------AKTVEHTRTERNVLEHVRQSPFLVTLHY 72 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhh---------hhHHHHHHHHHHHHHhccCCCCcccEEE
Confidence 456689999999999999863 478999999975322111 11134578899999999 5999999998
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEc
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
++.+ ...++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+
T Consensus 73 ~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nili~~~~~~kl~ 147 (332)
T cd05614 73 AFQTEAKLHLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHK--LGIVYRDIKLENILLDSEGHVVLT 147 (332)
T ss_pred EEecCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHeEECCCCCEEEe
Confidence 7766 788999999999999999976 3468999999999999999999999 899999999999999999999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccCC--CCChhhHHHHHHHHHHHHcCCCCCCCCchh----hHHHHHHh
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTI----LYYYLVVE 399 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~s~~sDi~SlGvvl~elltG~~p~~~~~~~----~~~~~~~~ 399 (455)
|||+++....... .......||+.|+|||++.+. .+.++|||||||++|||+||..||...... ........
T Consensus 148 DfG~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 225 (332)
T cd05614 148 DFGLSKEFLSEEK--ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK 225 (332)
T ss_pred eCcCCccccccCC--CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc
Confidence 9999876433221 122346799999999987653 678999999999999999999999754311 11111110
Q ss_pred cccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 400 QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 400 ~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
.... .+..++..+.+++.+|+..||++|| ++.++++
T Consensus 226 ~~~~------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 CDPP------------FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCC------------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1111 1123455688999999999999999 6777764
No 75
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-39 Score=311.64 Aligned_cols=250 Identities=28% Similarity=0.456 Sum_probs=198.9
Q ss_pred CCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+.++||+|+||.||+|.++. ++.||+|.+..... ....+.+|+.++++++||||+++++++.. .
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--------------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 75 (263)
T ss_pred EeeecCCcccceEEEEEEecCCceEEEEEecCCch--------------HHHHHHHHHHHHHhCCCCChhheEEEEcCCC
Confidence 44889999999999999864 78999999853211 13458899999999999999999998776 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..+++|||+++++|.+++.... ...+++..++.++.|++.||+|||+ ++++||||||+||++++++.+||+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 76 PFYIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 8899999999999999987643 3468999999999999999999999 899999999999999999999999999988
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... .......++..|+|||.+. +.++.++|||||||++|||++ |..||............... ..
T Consensus 153 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~------ 223 (263)
T cd05052 153 LMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YR------ 223 (263)
T ss_pred cccccee--eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CC------
Confidence 6543321 1112234466799999664 467889999999999999998 99999876533322222111 00
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
...+..++..+.+++.+|+..+|++||++.++.+.|+.++
T Consensus 224 ----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 224 ----MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 0111234566888999999999999999999999998864
No 76
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7e-40 Score=329.86 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=191.2
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||++..+. ++.||||++++..... ......+.+|+.++.+++||||+++++.+.+
T Consensus 3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~ 72 (363)
T cd05628 3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE----------KEQVGHIRAERDILVEADSLWVVKMFYSFQD 72 (363)
T ss_pred ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH----------hhHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 4556899999999999998764 8899999997532211 1113457889999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~--~givHrDlKp~NILi~~~~~vkL~DFGl 147 (363)
T cd05628 73 KLNLYLIMEFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQ--LGFIHRDIKPDNLLLDSKGHVKLSDFGL 147 (363)
T ss_pred CCeEEEEEcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEECCCCCEEEeeccC
Confidence 788999999999999999987 3469999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcc--------------------------------cceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHH
Q psy520 330 VKMSETSNMK--------------------------------TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILL 376 (455)
Q Consensus 330 a~~~~~~~~~--------------------------------~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ 376 (455)
++........ ........||+.|+|||++. ..++.++|||||||++|
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ 227 (363)
T cd05628 148 CTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (363)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHH
Confidence 8754321100 00012357999999999764 45788999999999999
Q ss_pred HHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhccc-C-cCCCCCHHHHHH
Q psy520 377 ELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVF-E-KDKRASMRDIVD 447 (455)
Q Consensus 377 elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~-d-p~~RPs~~evl~ 447 (455)
||++|..||...........+......+. +. +...++..+.++|.++|.. . +..||+++|+++
T Consensus 228 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~--~p------~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 228 EMLIGYPPFCSETPQETYKKVMNWKETLI--FP------PEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHcCcCccc--CC------CcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 99999999987664433333222111100 00 0111334466677765442 2 445799999876
No 77
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.7e-40 Score=326.68 Aligned_cols=241 Identities=24% Similarity=0.299 Sum_probs=190.2
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCc-ceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV-NLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~ 249 (455)
|++.+.||+|+||.||+|.+++ ++.||||+++....... .....+..|.+++..+.|+ +|+.+++++.
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~ 71 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQD----------DDVECTMVEKRVLALPGKPPFLTQLHSCFQ 71 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhcCCCCceeeeEEEEE
Confidence 4556899999999999999874 78899999975432111 1134578899999999765 5778888766
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ +..++||||+++|+|.+++.. ...+++.++..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||
T Consensus 72 ~~~~~~lv~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 72 TMDRLYFVMEYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 6 788999999999999999976 3458999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+++...... .......||+.|+|||++.+ .++.++|||||||++|||+||+.||...........+......++
T Consensus 147 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~-- 221 (324)
T cd05587 147 MCKENIFGG---KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP-- 221 (324)
T ss_pred cceecCCCC---CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--
Confidence 987532221 11234679999999997755 578899999999999999999999987764433333322221111
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
..++..+.+++.+||..||.+|++.
T Consensus 222 ----------~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 ----------KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1234457889999999999999986
No 78
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-39 Score=312.49 Aligned_cols=251 Identities=26% Similarity=0.379 Sum_probs=200.4
Q ss_pred CCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.|++..+||+|+||.||+|.++.+..||+|.+..... ....|.+|+.++++++|+|++++++++.+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~--------------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 72 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM--------------MPEAFLQEAQIMKKLRHDKLVPLYAVVSE 72 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc--------------cHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 3566789999999999999987767899998754321 12448899999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.... ...+++..+..++.|++.||.|||+ .|++|+||||+||++++++.++|+|||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dl~~~Nill~~~~~~~l~dfg~~ 149 (260)
T cd05069 73 EPIYIVTEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIER--MNYIHRDLRAANILVGDNLVCKIADFGLA 149 (260)
T ss_pred CCcEEEEEcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEEcCCCeEEECCCccc
Confidence 78899999999999999997643 3458999999999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......++..|+|||... +..+.++|+||||+++|||+| |..||............... ...
T Consensus 150 ~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~---- 222 (260)
T cd05069 150 RLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YRM---- 222 (260)
T ss_pred eEccCCccc--ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC----
Confidence 765432211 112335677899999664 567889999999999999999 99999876533222221111 000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
......+..+.+++.+||..+|++||++++|.+.|++
T Consensus 223 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 ------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0112345668999999999999999999999999986
No 79
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5e-40 Score=324.77 Aligned_cols=241 Identities=27% Similarity=0.370 Sum_probs=189.2
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHc-CCCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||+||+|.+++ ++.||||+++....... . ....+..|..++.. ++||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---~-------~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~ 70 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMD---D-------DVECTMVEKRVLSLAWEHPFLTHLYCTFQTKEN 70 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhc---c-------hHHHHHHHHHHHHhccCCCcCcceEEEEEeCCE
Confidence 369999999999999874 78999999975432111 0 12346677888876 489999999998777 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++.. ...+++.++..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~--~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 71 LFFVMEYLNGGDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHS--KGIVYRDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred EEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEECCCCCEEEccCCcceE
Confidence 8999999999999999976 3468999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+.......
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~------- 215 (316)
T cd05619 146 NMLGD---AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCY------- 215 (316)
T ss_pred CCCCC---CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-------
Confidence 32221 12234679999999997754 57899999999999999999999998765433222222111111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHH-HHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR-DIV 446 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~-evl 446 (455)
+..++..+.++|.+||..+|++||++. ++.
T Consensus 216 -----~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 216 -----PRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred -----CccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 112344578899999999999999997 554
No 80
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.5e-40 Score=313.75 Aligned_cols=251 Identities=28% Similarity=0.356 Sum_probs=199.4
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+++.+.||+|+||.||+|.+++++.||||.++.... . ...|.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~------~--------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05068 8 IQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM------D--------PKDFLAEAQIMKKLRHPKLIQLYAVCTLE 73 (261)
T ss_pred eeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc------c--------HHHHHHHHHHHHHCCCCCccceeEEEecC
Confidence 345589999999999999987778899999864321 0 2348899999999999999999998776
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.... ...+++..+..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 74 EPIYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEA--QNYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred CCeeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCCcceEEEcCCCCEEECCcceE
Confidence 78899999999999999997643 3468999999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
......... ......++..|+|||.+.+ .++.++|+||||+++|||+| |+.||............... ...
T Consensus 151 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~---- 223 (261)
T cd05068 151 RVIKEDIYE--AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRM---- 223 (261)
T ss_pred EEccCCccc--ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCC----
Confidence 876532211 1122233457999997654 67889999999999999999 99999876533222222111 100
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..+...+..+.+++.+|+..+|++||++.++++.|+++
T Consensus 224 ------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 ------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 01123345688899999999999999999999999864
No 81
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.5e-40 Score=317.64 Aligned_cols=265 Identities=27% Similarity=0.380 Sum_probs=199.6
Q ss_pred CCcCCCcccccCCEEEEEEEE-----cCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKL-----KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
++.+.+.||+|+||+||++.. .++..||+|.++..... . ....|.+|++++++++||||++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-----~-------~~~~~~~E~~~l~~l~h~~i~~~~ 72 (283)
T cd05080 5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ-----Q-------NTSGWKKEINILKTLYHENIVKYK 72 (283)
T ss_pred hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh-----H-------HHHHHHHHHHHHHhCCCCCEeeEE
Confidence 346678999999999988753 24778999998643210 0 134588999999999999999999
Q ss_pred ccccC---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 246 GFCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 246 ~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
+++.. ...++||||+++++|.+++.. ..+++.++..++.|++.||.|||+ ++++||||||+||+++.++.+
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~ 146 (283)
T cd05080 73 GCCSEQGGKGLQLIMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHS--QHYIHRDLAARNVLLDNDRLV 146 (283)
T ss_pred EEEecCCCceEEEEecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccChheEEEcCCCcE
Confidence 97654 357899999999999999875 248999999999999999999999 899999999999999999999
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-- 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-- 399 (455)
||+|||+++................++..|+|||.+. +..+.++||||||+++|||+||..||..............
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 9999999886654321111122234566799999664 5678999999999999999999999876442211111100
Q ss_pred --cccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 400 --QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 400 --~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
....+.+..+.......+..++..+.+++.+|+..+|++||++++|++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 227 QMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 001111112211111113345667999999999999999999999999999874
No 82
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8e-40 Score=314.43 Aligned_cols=253 Identities=27% Similarity=0.428 Sum_probs=199.5
Q ss_pred cCCCcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
++.+.||+|+||.||+|.++. ...||||.++.... . .....|.+|+.++++++||||+++++++
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 74 (266)
T cd05033 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS------D------KQRLDFLTEASIMGQFDHPNIIRLEGVV 74 (266)
T ss_pred eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC------h------HHHHHHHHHHHHHHhCCCCCcceEeEEE
Confidence 455899999999999999853 35799999864321 1 0134588999999999999999999987
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ ...++||||+++++|.+++.... ..+++.++..++.|++.||.|||+ ++++||||||+||+++.++.+||+||
T Consensus 75 ~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 75 TKSRPVMIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSE--MNYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred ecCCceEEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCcceEEEcCCCCEEECcc
Confidence 66 78899999999999999997643 368999999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++...... .........++..|+|||.+. +.++.++||||||+++|+|++ |..||............... ...
T Consensus 151 g~~~~~~~~~-~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~- 227 (266)
T cd05033 151 GLSRRLEDSE-ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-YRL- 227 (266)
T ss_pred chhhcccccc-cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCC-
Confidence 9998765221 111222334567899999765 467889999999999999998 99999765533222222111 000
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..+..++..+.+++.+|+..+|++||++.+|++.|++++
T Consensus 228 ---------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 228 ---------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 011233456889999999999999999999999999874
No 83
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=8.4e-40 Score=312.68 Aligned_cols=250 Identities=25% Similarity=0.359 Sum_probs=197.1
Q ss_pred CcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCc
Q psy520 176 NKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
++||+|+||.||+|.+.. +..||+|.+...... .....+.+|+++++++.||||+++++++...
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 68 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA------------AGKKEFLREASVMAQLDHPCIVRLIGVCKGE 68 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch------------HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC
Confidence 469999999999998642 268999998644321 0134588999999999999999999988878
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~nili~~~~~~kl~df~~~~ 143 (257)
T cd05060 69 PLMLVMELAPLGPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLES--KHFVHRDLAARNVLLVNRHQAKISDFGMSR 143 (257)
T ss_pred ceEEEEEeCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhh--cCeeccCcccceEEEcCCCcEEeccccccc
Confidence 889999999999999999873 368999999999999999999999 889999999999999999999999999988
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
................++..|+|||.+. +.++.++|||||||++|||++ |..||...+.......+... ..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-~~------ 216 (257)
T cd05060 144 ALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-ER------ 216 (257)
T ss_pred eeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-Cc------
Confidence 6643321111112223456899999664 467889999999999999998 99999876543222222111 00
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
...+..++..+.+++.+||..+|++||++.+|++.|+++.
T Consensus 217 ----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 ----LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0112234456889999999999999999999999998763
No 84
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.9e-40 Score=332.58 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=194.2
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||+|++. +++.||||++....... ......+.+|+.++..++||||+++++++.+
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~ 72 (364)
T cd05599 3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLE----------KEQVAHVRAERDILAEADNPWVVKLYYSFQD 72 (364)
T ss_pred ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCCCcceEEEEEc
Confidence 455689999999999999986 48899999997532210 0113457889999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 147 (364)
T cd05599 73 ENYLYLIMEYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHK--LGYIHRDIKPDNLLLDAKGHIKLSDFGL 147 (364)
T ss_pred CCeEEEEECCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEeeccc
Confidence 788999999999999999987 3469999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCccc-----------------------------------ceeccCCCCCCcCCccccc-CCCCChhhHHHHHH
Q psy520 330 VKMSETSNMKT-----------------------------------MYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGV 373 (455)
Q Consensus 330 a~~~~~~~~~~-----------------------------------~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGv 373 (455)
+.......... .......||+.|+|||++. ..++.++|||||||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 227 (364)
T cd05599 148 CTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGV 227 (364)
T ss_pred ceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchh
Confidence 87543211000 0011246999999999764 46789999999999
Q ss_pred HHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC---HHHHHH
Q psy520 374 ILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS---MRDIVD 447 (455)
Q Consensus 374 vl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs---~~evl~ 447 (455)
++|||++|..||...........+......+ .......++..+.+||.+|+. +|.+|++ +.++++
T Consensus 228 il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~--------~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 228 IMYEMLVGYPPFCSDNPQETYRKIINWKETL--------QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHcCCCcc--------CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999999999998776433222222111110 000111234567888888885 8999987 888865
No 85
>KOG2345|consensus
Probab=100.00 E-value=1.5e-40 Score=300.10 Aligned_cols=262 Identities=23% Similarity=0.321 Sum_probs=206.7
Q ss_pred CCCcCCCcccccCCEEEEEEEE-cCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+|++.++||+|||+-||+++. .++..||+|++..... ++ ++..++|++..++++||||+++++++
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~------~~-------~e~~~rEid~~rkf~s~~vl~l~dh~ 87 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ------ED-------IEEALREIDNHRKFNSPNVLRLVDHQ 87 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccch------HH-------HHHHHHHHHHHHhhCCcchHHHHHHH
Confidence 4678889999999999999984 3588999999964331 11 45578999999999999999999976
Q ss_pred cC------cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 249 NN------IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 249 ~~------~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
.. ...||+++|...|||.+.+....- +..+++.+.+.|+.++++||++||+...+..||||||+|||+.+.+.
T Consensus 88 l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~ 167 (302)
T KOG2345|consen 88 LREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGL 167 (302)
T ss_pred HHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCc
Confidence 33 357999999999999999976544 45799999999999999999999996556999999999999999999
Q ss_pred eEEccccccccccCCCccccee------ccCCCCCCcCCcccccC----CCCChhhHHHHHHHHHHHHcCCCCCCCCchh
Q psy520 322 PKLGDFGIVKMSETSNMKTMYT------ENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTI 391 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~------~~~~gt~~Y~aPE~~~~----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~ 391 (455)
++|.|||.+......-...... ..-..|..|.|||.+.- ..++++|||||||+||+|+.|..||+..-
T Consensus 168 ~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~-- 245 (302)
T KOG2345|consen 168 PVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY-- 245 (302)
T ss_pred eEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh--
Confidence 9999999987654321111100 12356899999998854 36889999999999999999999997421
Q ss_pred hHHHHHHhcccchh-hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 392 LYYYLVVEQEVPVR-EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 392 ~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
....++. .+......-+....+++.+.+||.+|+..||.+||++.+++..+++++
T Consensus 246 -------~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 246 -------QQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -------hcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1122221 122223333344457788999999999999999999999999998875
No 86
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.1e-40 Score=317.79 Aligned_cols=253 Identities=27% Similarity=0.433 Sum_probs=198.0
Q ss_pred cCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
.+.+.||+|+||.||+|.+.+ +..||||+++.... .+ ....|.+|++++++++||||+++++
T Consensus 8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~------~~~~~~~e~~~l~~l~~~~i~~~~~ 75 (280)
T cd05049 8 VLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS------ND------ARKDFEREAELLTNFQHENIVKFYG 75 (280)
T ss_pred hHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC------HH------HHHHHHHHHHHHHhcCCCCchheee
Confidence 344889999999999998642 47899999864322 10 1346899999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcE
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNN-----------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 314 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NI 314 (455)
++.. ...++||||+++++|.+++..... ...+++.++..++.|++.|+.|||+ ++++||||||+||
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~h~dlkp~ni 153 (280)
T cd05049 76 VCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS--QHFVHRDLATRNC 153 (280)
T ss_pred EEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh--CCeeccccccceE
Confidence 8877 788999999999999999976421 3458899999999999999999999 8999999999999
Q ss_pred EECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhh
Q psy520 315 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTIL 392 (455)
Q Consensus 315 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~ 392 (455)
+++.++.+||+|||+++........ .......++..|+|||++. +.++.++|||||||++|||++ |..||.......
T Consensus 154 li~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~ 232 (280)
T cd05049 154 LVGYDLVVKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE 232 (280)
T ss_pred EEcCCCeEEECCcccceecccCcce-ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999998754332211 1112335678899999764 467889999999999999998 999997665433
Q ss_pred HHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 393 YYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 393 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
....+.... .......++..+.+++.+||..+|++||++.||++.|++
T Consensus 233 ~~~~~~~~~-----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 233 VIECITQGR-----------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHHcCC-----------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 222221111 001122345668899999999999999999999999864
No 87
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.7e-40 Score=325.82 Aligned_cols=241 Identities=25% Similarity=0.318 Sum_probs=190.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 249 (455)
|++.+.||+|+||.||+|..+. ++.||||++++...... .....+..|..++..+ +|++|+.+++++.
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~ 71 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQD----------DDVECTMVEKRVLALSGKPPFLTQLHSCFQ 71 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhccCCCeEeeEEEEEe
Confidence 3456899999999999999874 78999999975432111 1134467788888777 5899999998877
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ +..++||||+++|+|.+++... ..+++.++..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||
T Consensus 72 ~~~~~~lv~E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 72 TMDRLYFVMEYVNGGDLMYQIQQV---GRFKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCEEecCCCHHHeEECCCCcEEEccCC
Confidence 6 7889999999999999998763 458999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+++...... .......||+.|+|||++.+ .++.++|||||||++|||+||..||...........+......++
T Consensus 147 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p-- 221 (323)
T cd05616 147 MCKENMWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP-- 221 (323)
T ss_pred CceecCCCC---CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--
Confidence 987543221 12335679999999997654 578999999999999999999999987764433333322221111
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
..++..+.+++.+|+..+|.+|++.
T Consensus 222 ----------~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 ----------KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ----------CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1234557889999999999999984
No 88
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7.4e-40 Score=311.95 Aligned_cols=248 Identities=25% Similarity=0.403 Sum_probs=192.2
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
++||+|+||.||+|.++ +++.||+|.+..... .+ ....|.+|++++++++||||+++++++.. ...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~------~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 68 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP------PD------LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 68 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC------HH------HHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCe
Confidence 36999999999999986 588999998753211 10 13458899999999999999999998877 778
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++++|.+++... ...+++..++.++.|++.||.|||+ ++++||||||+||+++.++.+||+|||++...
T Consensus 69 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 144 (252)
T cd05084 69 YIVMELVQGGDFLTFLRTE--GPRLKVKELIQMVENAAAGMEYLES--KHCIHRDLAARNCLVTEKNVLKISDFGMSREE 144 (252)
T ss_pred EEEEeeccCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheEEEcCCCcEEECccccCccc
Confidence 9999999999999998753 3468999999999999999999999 88999999999999999999999999998754
Q ss_pred cCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... ........++..|+|||.+ .+.++.++|+|||||++|||++ |..||...............
T Consensus 145 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~----------- 212 (252)
T cd05084 145 EDGVY-ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG----------- 212 (252)
T ss_pred ccccc-cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-----------
Confidence 32211 1111112234569999966 4467889999999999999998 99999765432221111110
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.....+..++..+.+++.+|+..+|++||++.+|.+.|+.
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 213 VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 0001112334568889999999999999999999998863
No 89
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3e-40 Score=316.93 Aligned_cols=248 Identities=33% Similarity=0.498 Sum_probs=189.6
Q ss_pred CCcccccCCEEEEEEEEc-----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 175 GNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.+.||.|+||.||+|++. .+..|+||.++.... . .....|.+|++.+++++||||++++|++.
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~------~------~~~~~~~~e~~~l~~l~h~ni~~~~g~~~ 71 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS------E------EEEEEFLNEIQILRKLRHPNIVKLYGFCI 71 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSS------H------HHHHHHHHHHHHHHTHSBTTBE-EEEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccc------c------ccceeeeeccccccccccccccccccccc
Confidence 468999999999999987 257899999954221 1 01456899999999999999999999998
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...++|+||+++|+|.++|.... ...+++.++..|+.|++.||.|||+ ++++||||+++||+++.++.+||+|||
T Consensus 72 ~~~~~~lv~e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~--~~iiH~~l~~~nill~~~~~~Kl~~f~ 148 (259)
T PF07714_consen 72 ENEPLFLVMEYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHS--NNIIHGNLSPSNILLDSNGQVKLSDFG 148 (259)
T ss_dssp SSSSEEEEEE--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHH--TTEEEST-SGGGEEEETTTEEEEESTT
T ss_pred ccccccccccccccccccccccccc-ccccccccccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 6 67899999999999999999852 3569999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++........ ........+...|+|||.+.+ .++.++||||||+++|||++ |..||................ .
T Consensus 149 ~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~-~--- 223 (259)
T PF07714_consen 149 LSRPISEKSK-YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ-R--- 223 (259)
T ss_dssp TGEETTTSSS-EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE-E---
T ss_pred cccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-c---
Confidence 9887632221 122233456778999997744 57889999999999999999 789998765433222221111 1
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
...+..++..+.+++.+||..+|++||++.++++.|
T Consensus 224 -------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 -------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111223445588899999999999999999999886
No 90
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.1e-39 Score=314.02 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=195.5
Q ss_pred CCCcccccCCEEEEEEEEcC-Cc--EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 174 RGNKLGEGQFGTVYYGKLKN-GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
++++||+|+||.||+|.+.+ +. .||+|.++.... .. .....|.+|+++++.++|+||+++++++..
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~------~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 71 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC------TR-----SEMEDFLSEAVCMKEFDHPNVMRLIGVCLQ 71 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcC------CH-----HHHHHHHHHHHHHHhCCCCCcceEEEEEcc
Confidence 56899999999999999864 32 689998864321 00 114568899999999999999999987632
Q ss_pred -------cceeEEEEeccCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 251 -------IMNCIVYEYMCNGSLYDRLARVN---NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 251 -------~~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
...+++|||+++|+|.+++.... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++
T Consensus 72 ~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~Nil~~~~~ 149 (272)
T cd05075 72 TVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS--KSFIHRDLAARNCMLNENM 149 (272)
T ss_pred CCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhheEEcCCC
Confidence 24589999999999999874321 13458999999999999999999999 8999999999999999999
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHH
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 398 (455)
.+||+|||+++........ .......+++.|+|||.+. ..++.++|||||||++|||++ |..||.............
T Consensus 150 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 228 (272)
T cd05075 150 NVCVADFGLSKKIYNGDYY-RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR 228 (272)
T ss_pred CEEECCCCcccccCcccce-ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999999998865433211 1112334667899999764 457899999999999999999 899997655332222221
Q ss_pred hcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 399 EQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 399 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.... . .....++..+.++|.+||..+|.+||++.++++.|++++
T Consensus 229 ~~~~-~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 272 (272)
T cd05075 229 QGNR-L----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272 (272)
T ss_pred cCCC-C----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 1110 0 011234456889999999999999999999999998864
No 91
>KOG1095|consensus
Probab=100.00 E-value=1.4e-40 Score=356.66 Aligned_cols=255 Identities=29% Similarity=0.442 Sum_probs=206.9
Q ss_pred CCCcccccCCEEEEEEEEcC--Cc----EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 174 RGNKLGEGQFGTVYYGKLKN--GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~--~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
..+.||+|.||.||.|...+ |. .||||.++.... . -....|.+|..+|+.++|||||+++|.
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~------~------~~~~~Fl~Ea~~m~~f~HpNiv~liGv 763 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS------E------QEVSDFLKEALLMSKFDHPNIVSLIGV 763 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC------H------HHHHHHHHHHHHHhcCCCcceeeEEEe
Confidence 45789999999999999764 33 489999875432 1 125669999999999999999999999
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNN----TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
|.+ ..+++++|||+||+|..+|+.... ...++....+.++.+||+|+.||++ +++|||||...|+||+....+
T Consensus 764 ~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~--~~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 764 CLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES--KHFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred ecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh--CCCcCcchhhhheeecccCcE
Confidence 988 788999999999999999987522 3468999999999999999999999 889999999999999999999
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhc
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 400 (455)
||+|||+|+........... ....-...|||||.+. +.+++|||||||||++||++| |..||.+.+..........+
T Consensus 842 KIaDFGlArDiy~~~yyr~~-~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g 920 (1025)
T KOG1095|consen 842 KIADFGLARDIYDKDYYRKH-GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG 920 (1025)
T ss_pred EEcccchhHhhhhchheecc-CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC
Confidence 99999999966554432211 1122235699999774 789999999999999999999 99999988754433322211
Q ss_pred ccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
. .-.++..++..+.+|+.+||..+|++||++..+++++.++++
T Consensus 921 g-----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 921 G-----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred C-----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 1 112345566667799999999999999999999999988764
No 92
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.6e-40 Score=316.26 Aligned_cols=254 Identities=25% Similarity=0.404 Sum_probs=198.0
Q ss_pred cCCCcccccCCEEEEEEEEc-CCc----EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
++.++||+|+||+||+|++. ++. .||+|+++.... . .....+.+|+.+++.+.||||++++++
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~------~------~~~~~~~~e~~~l~~~~~~~i~~~~~~ 77 (279)
T cd05109 10 KKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS------P------KANKEILDEAYVMAGVGSPYVCRLLGI 77 (279)
T ss_pred eeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC------H------HHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 45589999999999999864 343 489999864321 1 013458899999999999999999999
Q ss_pred ccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+.....+++++|+++|+|.+++.... ..+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+||
T Consensus 78 ~~~~~~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~--~~iiH~dlkp~Nil~~~~~~~kL~df 153 (279)
T cd05109 78 CLTSTVQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEE--VRLVHRDLAARNVLVKSPNHVKITDF 153 (279)
T ss_pred EcCCCcEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccccceEEEcCCCcEEECCC
Confidence 88877889999999999999987632 368999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++....... ........++..|+|||.. .+.++.++|||||||++|||++ |..||................ ..
T Consensus 154 G~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~- 230 (279)
T cd05109 154 GLARLLDIDET-EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-RL- 230 (279)
T ss_pred Cceeecccccc-eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-cC-
Confidence 99886643321 1111223456789999966 4568899999999999999998 999998655332222221111 00
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+..++..+.+++.+||..||++||++.++++.|+++..
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 231 ---------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0111234457889999999999999999999999988753
No 93
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1e-39 Score=324.81 Aligned_cols=255 Identities=24% Similarity=0.329 Sum_probs=195.2
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++.++. +..+|+|.++.... . .....+.+|++++++++||||+++++++.+
T Consensus 7 y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (333)
T cd06650 7 FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK------P------AIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (333)
T ss_pred hheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC------H------HHHHHHHHHHHHHHHCCCCcccceeEEEEE
Confidence 4566999999999999999874 78899998864321 1 013458899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||+++|+|.+++.. ...+++..+..++.+++.||.|||+. .+++||||||+|||++.++.+||+|||+
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 75 DGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred CCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 788999999999999999976 34689999999999999999999972 3699999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--ccc----
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEV---- 402 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~---- 402 (455)
+...... ......||..|+|||.+.+ .++.++|+|||||++|||++|..||.............. ...
T Consensus 151 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 225 (333)
T cd06650 151 SGQLIDS-----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAES 225 (333)
T ss_pred chhhhhh-----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcccc
Confidence 8754322 1234578999999997754 578899999999999999999999976543222111100 000
Q ss_pred ------------------------chhhhcchhh----cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 ------------------------PVREVLDKEA----GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ------------------------~~~~~~d~~~----~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......+... ...+....+..+.+|+.+||..||++||++.|++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 226 ETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0000000000 11111224566889999999999999999999965
No 94
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.2e-39 Score=312.14 Aligned_cols=251 Identities=26% Similarity=0.394 Sum_probs=200.8
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNI 251 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
|++.++||+|+||.||+|..++++.||+|.+..... ....|.+|+.++++++|+||+++++++.+.
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~--------------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 73 (260)
T cd05067 8 LKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM--------------SPEAFLAEANLMKQLQHPRLVRLYAVVTQE 73 (260)
T ss_pred ceeeeeeccCccceEEeeecCCCceEEEEEecCCCC--------------cHHHHHHHHHHHHhcCCcCeeeEEEEEccC
Confidence 456689999999999999988889999999864321 134588999999999999999999987778
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..+++|||+.+++|.+++.... ...+++.++..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~--~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 74 PIYIITEYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIER--KNYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhc--CCeecccccHHhEEEcCCCCEEEccCccee
Confidence 8899999999999999987643 3568999999999999999999999 889999999999999999999999999987
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... .......++..|+|||.+. +.++.++|+||||+++||+++ |..||............... ...
T Consensus 151 ~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~----- 222 (260)
T cd05067 151 LIEDNEY--TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-YRM----- 222 (260)
T ss_pred ecCCCCc--ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-CCC-----
Confidence 6543221 1122345677899999764 457889999999999999999 99999866532222111111 000
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
......+..+.+++.+|+..+|++||+++++.+.|+++
T Consensus 223 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 223 -----PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred -----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 01122345588899999999999999999999999863
No 95
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.9e-40 Score=327.14 Aligned_cols=259 Identities=25% Similarity=0.386 Sum_probs=198.1
Q ss_pred CCcCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceec
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.|++.+.||+|+||.||+|.+. +++.||+|+++.... .. ....+..|+.++.++ +|+||++
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~------~~------~~~~~~~E~~~~~~l~~h~niv~ 75 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT------AS------EYKALMTELKILIHIGHHLNVVN 75 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC------HH------HHHHHHHHHHHHHhhccCcchhh
Confidence 4677799999999999999643 247899999863221 10 134577899999999 8999999
Q ss_pred ccccccC--cceeEEEEeccCCCHHHHHhhcCC-----------------------------------------------
Q psy520 244 LLGFCNN--IMNCIVYEYMCNGSLYDRLARVNN----------------------------------------------- 274 (455)
Q Consensus 244 l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------- 274 (455)
++++|.. ...+++|||+++++|.+++.....
T Consensus 76 ~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (337)
T cd05054 76 LLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD 155 (337)
T ss_pred eeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence 9997754 567889999999999999865321
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCccccee
Q psy520 275 -----------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 343 (455)
Q Consensus 275 -----------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 343 (455)
..++++..+..++.|++.||.|||+ .||+||||||+|||++.++.+||+|||+++...... .....
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~-~~~~~ 232 (337)
T cd05054 156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP-DYVRK 232 (337)
T ss_pred cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCcceEEEeCCCcEEEeccccchhcccCc-chhhc
Confidence 1268999999999999999999999 899999999999999999999999999998654322 11112
Q ss_pred ccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHH
Q psy520 344 ENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVE 421 (455)
Q Consensus 344 ~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 421 (455)
....++..|+|||++ ...++.++|||||||++|||++ |..||.................. ...+....
T Consensus 233 ~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 302 (337)
T cd05054 233 GDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR----------MRAPEYAT 302 (337)
T ss_pred cCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC----------CCCCccCC
Confidence 334567789999965 5568999999999999999998 99999764321111111101000 00112234
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 422 TLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 422 ~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+.+++.+||..+|++||++.+|++.|++++.
T Consensus 303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 457888999999999999999999999999874
No 96
>KOG0660|consensus
Probab=100.00 E-value=1.6e-40 Score=315.32 Aligned_cols=264 Identities=24% Similarity=0.358 Sum_probs=201.3
Q ss_pred CCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecc
Q psy520 166 FNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 166 f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
|....+|...+.||+|+||.|..+.++ +|+.||||++...-. .....++-.+|+++|+.++|+||+.+
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~-----------~~~~akRtlRElklLr~~~HeNIi~l 86 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE-----------NQIDAKRTLRELKLLRHLRHENIIGL 86 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhh-----------chHHHHHHHHHHHHHHHhcCCCcceE
Confidence 333344444588999999999999987 489999999963221 11225667899999999999999999
Q ss_pred ccccc-----C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC
Q psy520 245 LGFCN-----N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 245 ~~~~~-----~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
++... + ...|+|+|+| +.+|...++. +..++......++.|+++||.|+|+ .+++||||||+|+|++.
T Consensus 87 ~di~~p~~~~~f~DvYiV~elM-etDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHS--AnViHRDLKPsNll~n~ 160 (359)
T KOG0660|consen 87 LDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHS--ANVIHRDLKPSNLLLNA 160 (359)
T ss_pred EeecccccccccceeEEehhHH-hhHHHHHHHc---CccccHHHHHHHHHHHHHhcchhhc--ccccccccchhheeecc
Confidence 88542 2 5779999999 7788888876 4459999999999999999999999 78999999999999999
Q ss_pred CCceEEccccccccccCCCcccceeccCCCCCCcCCcccc--cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHH
Q psy520 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYL 396 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~--~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~ 396 (455)
+..+||+|||+||...... ....-+..+.|.+|.|||++ ...++.+.||||.|||+.||++|++.|.+.+.......
T Consensus 161 ~c~lKI~DFGLAR~~~~~~-~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~l 239 (359)
T KOG0660|consen 161 DCDLKICDFGLARYLDKFF-EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQL 239 (359)
T ss_pred CCCEEeccccceeeccccC-cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHH
Confidence 9999999999999876541 22222456789999999955 34689999999999999999999999998874433333
Q ss_pred HHh--cccc-----------hhhhcchhhcCCC------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 397 VVE--QEVP-----------VREVLDKEAGEWN------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 397 ~~~--~~~~-----------~~~~~d~~~~~~~------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+.. +..+ ...++........ -..+.....+|+.+||..||.+|+|++|.++
T Consensus 240 I~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 240 ILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 322 1111 1112111110000 1245566788999999999999999999875
No 97
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.6e-39 Score=312.16 Aligned_cols=258 Identities=22% Similarity=0.315 Sum_probs=201.7
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|+.+ +++.||||.++....... .....|.+|++++++++||||+++++++.+
T Consensus 4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (267)
T cd08228 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDA----------KARQDCVKEIDLLKQLNHPNVIKYLDSFIE 73 (267)
T ss_pred eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCH----------HHHHHHHHHHHHHHhCCCcceeeeeeeEEE
Confidence 456699999999999999976 489999998864322111 113458899999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+..++|+||+++|+|.+++..... ...+++.++..++.|++.||.|||+ ++++|+||||+||+++.++.++|+|||
T Consensus 74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 74 DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS--RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh--CCeeCCCCCHHHEEEcCCCCEEECccc
Confidence 788999999999999998864332 3468999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......|++.|+|||.+. ...+.++|+||||+++|||++|..||...................
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~--- 225 (267)
T cd08228 152 LGRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY--- 225 (267)
T ss_pred cceeccchhH---HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC---
Confidence 9886543221 122457889999999764 457889999999999999999999997554221111111011000
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
...+....+..+.+++.+||..+|.+||++.+|++.|+++
T Consensus 226 -----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 226 -----PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -----CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1111234556688999999999999999999999999875
No 98
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.9e-39 Score=318.86 Aligned_cols=196 Identities=24% Similarity=0.372 Sum_probs=158.7
Q ss_pred CCcccccCCEEEEEEEEc---CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 175 GNKLGEGQFGTVYYGKLK---NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+++||+|+||+||+|..+ +++.||+|.+..... ...+.+|+.++++++||||+++++++..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---------------~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 70 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---------------SMSACREIALLRELKHPNVISLQKVFLSH 70 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---------------cHHHHHHHHHHHhcCCCCCcceeeeEecC
Confidence 478999999999999875 367899999864321 1236789999999999999999997643
Q ss_pred --cceeEEEEeccCCCHHHHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEE----CC
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVN------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL----DE 318 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl----~~ 318 (455)
...|+||||+ +++|.+++.... ....+++..+..++.|++.||.|||+ +||+||||||+|||+ +.
T Consensus 71 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivHrDlkp~Nil~~~~~~~ 147 (317)
T cd07868 71 ADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred CCcEEEEEEecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh--CCEEcCCCCHHHEEEecCCCC
Confidence 5678999998 568888875432 12358999999999999999999999 899999999999999 46
Q ss_pred CCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q psy520 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDN 388 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~ 388 (455)
++.+||+|||+++................||+.|+|||++.+ .++.++||||+||++|||++|.+||...
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 689999999999876443221122345678999999997754 3688999999999999999999999754
No 99
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.7e-40 Score=333.71 Aligned_cols=249 Identities=22% Similarity=0.287 Sum_probs=195.2
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.++||+|+||.||++..+. ++.||+|++........ .....+.+|+.+++.++||||+++++++.+
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~ 115 (370)
T cd05596 46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKR----------SDSAFFWEERDIMAHANSEWIVQLHYAFQDD 115 (370)
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 445899999999999999864 88999999964321110 013447789999999999999999998777
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||++||+|.+++.. ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~~kL~DfG~~ 189 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEcCCCCEEEEeccce
Confidence 778999999999999998865 247889999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC-----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
........ .......||+.|+|||++.+ .++.++|||||||++|||++|..||...........+......+
T Consensus 190 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~- 266 (370)
T cd05596 190 MKMDANGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSL- 266 (370)
T ss_pred eeccCCCc--ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcC-
Confidence 76543221 11234679999999997643 36789999999999999999999998766433333222111110
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCC--CCCHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDK--RASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~--RPs~~evl~ 447 (455)
.......++..+.+||.+|+..+|.+ ||+++++++
T Consensus 267 -------~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 267 -------TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred -------CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 00011234567889999999988887 999999975
No 100
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.1e-40 Score=326.35 Aligned_cols=238 Identities=24% Similarity=0.327 Sum_probs=190.4
Q ss_pred CcccccCCEEEEEEEEc----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 176 NKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.||+|+||.||++... +|+.||+|+++...... .....+.+|++++++++||||+++++++.+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 70 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-----------RDRVRTKMERDILAEVNHPFIVKLHYAFQTE 70 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-----------hhHHHHHHHHHHHHhCCCCCcccEEEEEEcC
Confidence 57999999999998752 47899999997533210 013346789999999999999999998776
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
+..|+||||+++|+|.+++.+ ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 71 ~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 145 (318)
T cd05582 71 GKLYLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLS 145 (318)
T ss_pred CEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHeEECCCCcEEEeeccCC
Confidence 788999999999999999976 3468999999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
+...... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...........+......++
T Consensus 146 ~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p---- 218 (318)
T cd05582 146 KESIDHE---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP---- 218 (318)
T ss_pred cccCCCC---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 7654321 12334679999999997754 568899999999999999999999987654332222222211111
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRD 444 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~e 444 (455)
..++..+.+||.+||..||++||++.+
T Consensus 219 --------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 --------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 123455788999999999999999544
No 101
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.9e-39 Score=309.46 Aligned_cols=254 Identities=29% Similarity=0.394 Sum_probs=197.9
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+++.||+|+||.||+|... +++.||+|.+......... ......+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~--------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 75 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPET--------KKEVNALECEIQLLKNLQHERIVQYYGCLRD 75 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhh--------HHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc
Confidence 445699999999999999875 4899999998754321110 1114568899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||+
T Consensus 76 ~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nilv~~~~~~~l~dfg~ 150 (263)
T cd06625 76 DETLSIFMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHS--NMIVHRDIKGANILRDSAGNVKLGDFGA 150 (263)
T ss_pred CCeEEEEEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 788999999999999999886 3468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++................|+..|+|||.+.+ ..+.++||||||+++|||++|+.||..................
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----- 225 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN----- 225 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC-----
Confidence 8765432211111134568889999997754 5788999999999999999999999765433222111111100
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
...+..++..+.++|.+||..+|++||++.++++.
T Consensus 226 -----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 -----PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00112345568889999999999999999999863
No 102
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.6e-39 Score=319.74 Aligned_cols=262 Identities=22% Similarity=0.323 Sum_probs=198.0
Q ss_pred CCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecc
Q psy520 166 FNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 166 f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
|.....|.+.++||+|+||.||+|+++ +++.||+|.++....... ...+.+|+.++++++||||+++
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 2 FGKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------PCTAIREVSLLKDLKHANIVTL 69 (309)
T ss_pred CCCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc------------chhHHHHHHHHHhCCCCCcceE
Confidence 555566778899999999999999986 478899999865432111 2236789999999999999999
Q ss_pred cccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 245 LGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
++++.+ +..++||||+. ++|.+++.... ..+++..+..++.|++.||.|||+ +||+||||||+||+++.++.+|
T Consensus 70 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~--~~ivH~dlkp~Nill~~~~~~k 144 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLD-KDLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHR--RKVLHRDLKPQNLLINERGELK 144 (309)
T ss_pred EEEEeeCCeEEEEEeCCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEE
Confidence 998776 78899999996 58888887643 358899999999999999999999 8999999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-c
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
|+|||+++...... .......+|+.|+|||.+.+ .++.++|||||||++|||+||.+||...+.......... -
T Consensus 145 l~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 221 (309)
T cd07872 145 LADFGLARAKSVPT---KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLL 221 (309)
T ss_pred ECccccceecCCCc---cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 99999987543321 11223467899999997643 468899999999999999999999987653222221111 0
Q ss_pred ccch----hhh------cchhhcCC-------ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPV----REV------LDKEAGEW-------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~----~~~------~d~~~~~~-------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+. +.. .+...... ....++..+.+||.+|+..||.+|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 222 GTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000 000 00000000 01124556789999999999999999999876
No 103
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-39 Score=339.99 Aligned_cols=249 Identities=21% Similarity=0.279 Sum_probs=196.4
Q ss_pred CcCCCcccccCCEEEEEEEEcC--CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
|.+.+.||+|+||.||++.... +..||+|++..... . ....+.+|+.+++.++||||+++++++.
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~------~-------~~~~~~~E~~~l~~l~Hpniv~~~~~~~ 135 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE------R-------QAAYARSELHCLAACDHFGIVKHFDDFK 135 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH------H-------HHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence 5666899999999999998653 56788887642211 1 1344778999999999999999999877
Q ss_pred C-cceeEEEEeccCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARV-NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
. +..||||||++||+|.+++... ....++++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+||
T Consensus 136 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--~~ivHrDlkp~NIll~~~~~~kL~DF 213 (478)
T PTZ00267 136 SDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS--RKMMHRDLKSANIFLMPTGIIKLGDF 213 (478)
T ss_pred ECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh--CCEEECCcCHHhEEECCCCcEEEEeC
Confidence 6 8889999999999999988643 224578999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+++...... .........||+.|+|||++.+ .++.++|||||||++|||++|..||..................
T Consensus 214 gla~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--- 289 (478)
T PTZ00267 214 GFSKQYSDSV-SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--- 289 (478)
T ss_pred cCceecCCcc-ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---
Confidence 9998654332 1122345679999999997754 5788999999999999999999999876543322222111110
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+..++..+.++|.+||..+|++||++.+++.
T Consensus 290 --------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 --------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 011224455888999999999999999999864
No 104
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6e-40 Score=333.26 Aligned_cols=250 Identities=21% Similarity=0.286 Sum_probs=189.5
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|.+.++||+|+||.||++.+. +++.||+|+.. ...+.+|++++++++||||+++++++.
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------------------~~~~~~E~~il~~l~HpnIv~~~~~~~ 153 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------------------RGGTATEAHILRAINHPSIIQLKGTFT 153 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------------------hhhhHHHHHHHHhCCCCCCCCEeEEEE
Confidence 4677799999999999999986 48899999753 122678999999999999999999776
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...|+|+|++ +++|.+++... ..+++..++.++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 154 ~~~~~~lv~e~~-~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~--~~IvHrDiKP~NIll~~~~~vkL~DFG 227 (391)
T PHA03212 154 YNKFTCLILPRY-KTDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHE--NRIIHRDIKAENIFINHPGDVCLGDFG 227 (391)
T ss_pred ECCeeEEEEecC-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHhEEEcCCCCEEEEeCC
Confidence 5 7889999999 57898888763 458999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCch--------hhHHHHHHh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNT--------ILYYYLVVE 399 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~--------~~~~~~~~~ 399 (455)
+++...... ........||+.|+|||++.+ .++.++|||||||++|||++|..||..... .........
T Consensus 228 ~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~ 305 (391)
T PHA03212 228 AACFPVDIN--ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRR 305 (391)
T ss_pred ccccccccc--ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHH
Confidence 987543221 111234689999999997644 578999999999999999999988754321 011111100
Q ss_pred -cccc----------hhhhc-c--h----hhc---CCC-hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 400 -QEVP----------VREVL-D--K----EAG---EWN-ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 -~~~~----------~~~~~-d--~----~~~---~~~-~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+..+ +.... . . ... .|. ....+..+.+||.+|+..||++|||++|+++
T Consensus 306 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 306 SGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 00000 0 0 000 000 1134556888999999999999999999985
No 105
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=8.5e-40 Score=324.89 Aligned_cols=241 Identities=24% Similarity=0.352 Sum_probs=188.3
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++. ++.||||+++....... .....+..|..++.++ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~----------~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~ 70 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD----------EDIDWVQTEKHVFETASNHPFLVGLHSCFQTESR 70 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCE
Confidence 369999999999999864 88999999975432111 1134578899999998 79999999998877 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ +|++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 71 LFFVIEFVSGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHE--RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 145 (329)
T ss_pred EEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEECcCccccc
Confidence 89999999999999988763 469999999999999999999999 8999999999999999999999999999874
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchh---------hHHHHHHhccc
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI---------LYYYLVVEQEV 402 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~---------~~~~~~~~~~~ 402 (455)
..... .......||+.|+|||++.+ .++.++|+|||||++|||++|..||+..... .....+.....
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (329)
T cd05588 146 GIRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI 222 (329)
T ss_pred cccCC---CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC
Confidence 32211 12335689999999997754 5788999999999999999999999742210 01111111111
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC------HHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS------MRDIV 446 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs------~~evl 446 (455)
.+ +..++..+.++|.+||..||.+||+ +.+++
T Consensus 223 ~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 223 RI------------PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred CC------------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 11 1223445788999999999999997 56665
No 106
>KOG0589|consensus
Probab=100.00 E-value=1.6e-40 Score=328.69 Aligned_cols=250 Identities=21% Similarity=0.270 Sum_probs=210.2
Q ss_pred CCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|+..+++|+|+||.++.++.+. ++.||+|++......... .....+|+.++++++|||||.+.+.+.
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-----------r~~A~~E~~lis~~~hP~iv~y~ds~~ 73 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-----------RRSAIQEMDLLSKLLHPNIVEYKDSFE 73 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-----------hHHHHHHHHHHHhccCCCeeeeccchh
Confidence 46677999999999999998774 789999999865543221 234789999999999999999999766
Q ss_pred C-cc-eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 250 N-IM-NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 250 ~-~~-~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+ +. .||||+||+||+|.+.+.+.. +..+++..++.++.|++.|+.|||+ +.|+|||||++||++..++.+||+||
T Consensus 74 ~~~~~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~--~~iLHRDlK~~Nifltk~~~VkLgDf 150 (426)
T KOG0589|consen 74 EDGQLLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE--NRVLHRDLKCANIFLTKDKKVKLGDF 150 (426)
T ss_pred cCCceEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh--hhhhcccchhhhhhccccCceeecch
Confidence 5 66 899999999999999998866 4679999999999999999999998 78999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+|+...... .......||+.||+||++.+ .+..|+|||||||++|||++-+++|...+-......+....
T Consensus 151 GlaK~l~~~~---~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~----- 222 (426)
T KOG0589|consen 151 GLAKILNPED---SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL----- 222 (426)
T ss_pred hhhhhcCCch---hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-----
Confidence 9999876643 23567899999999998876 57899999999999999999999999887544444433221
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
. ..-+..++..++.+|..|+..+|..||++.+++..
T Consensus 223 -~-----~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -Y-----SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -C-----CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1 11234566678999999999999999999999874
No 107
>KOG0032|consensus
Probab=100.00 E-value=1.4e-39 Score=325.43 Aligned_cols=251 Identities=27% Similarity=0.385 Sum_probs=211.1
Q ss_pred CCCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceecccc
Q psy520 169 KPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLG 246 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~ 246 (455)
...|++++.||.|.||.||+++.+. |+.+|+|.+.+....... ....+.+|+.+|+++. |||||.+++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------~~~~v~~Ev~il~~l~~hpniv~l~~ 103 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------DREDVRREVAILQQLSGHPNIVQLKD 103 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------cHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 3457788999999999999999886 999999999876553222 1345889999999998 999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC----CCc
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE----NFV 321 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~----~~~ 321 (455)
.+.+ ...++|||++.||.|.+++... .+++..+..++.|++.|++|||+ .|++||||||+|+|+.. ++.
T Consensus 104 ~~e~~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~--~gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 104 AFEDPDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS--LGVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred EEEcCCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh--CCceeccCCHHHeeeccccCCCCc
Confidence 8887 7889999999999999999885 29999999999999999999999 89999999999999963 358
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 400 (455)
+|++|||++....... ....++||+.|+|||++. ..++..+||||+||++|.|++|.+||...........+...
T Consensus 178 ik~~DFGla~~~~~~~----~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~ 253 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPGE----RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG 253 (382)
T ss_pred EEEeeCCCceEccCCc----eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC
Confidence 9999999999876522 245689999999999887 57899999999999999999999999988865555444333
Q ss_pred ccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... .....-..++..++++|..++..||.+|+++.++++
T Consensus 254 ~~~--------f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 254 DFD--------FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCC--------CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 221 111223456778999999999999999999999986
No 108
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.7e-40 Score=326.52 Aligned_cols=238 Identities=27% Similarity=0.374 Sum_probs=186.4
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHH-HHHcCCCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ-TLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||+||+|.++ +|+.||||++........ .....+..|.. +++.++||||+++++.+.+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~ 70 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK----------KEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADK 70 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCE
Confidence 36999999999999986 489999999975322110 01223445544 5678999999999997766 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~givH~dikp~NIll~~~~~~kl~Dfg~~~~ 145 (323)
T cd05575 71 LYFVLDYVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS--LNIIYRDLKPENILLDSQGHVVLTDFGLCKE 145 (323)
T ss_pred EEEEEcCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEECCCCcEEEeccCCCcc
Confidence 8999999999999999876 3468999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...+.......+......+.
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~------ 216 (323)
T cd05575 146 GIEHS---KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK------ 216 (323)
T ss_pred cccCC---CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC------
Confidence 32221 12335679999999997654 578899999999999999999999987654333222222211111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
...+..+.++|.+|+..||.+||++.
T Consensus 217 ------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 217 ------PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ------CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 12345588899999999999999985
No 109
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-39 Score=316.94 Aligned_cols=257 Identities=26% Similarity=0.346 Sum_probs=198.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
+++.+.||+|+||.||+|.... ...+|+|.+..... . .....+.+|+.+++.++||||++++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~ 69 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS------S------SELRDLLSEFNLLKQVNHPHVIKLY 69 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC------H------HHHHHHHHHHHHHhhCCCCCEeeEE
Confidence 3456899999999999998642 35688888864321 0 0135588999999999999999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVNN---------------------TPPLDSNKRYSIALGVAEALHYLHSLSKP 303 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~ 303 (455)
+.+.. +..++++||+.+|+|.+++..... ..++++.+++.++.|++.||.|||+ .+
T Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~ 147 (290)
T cd05045 70 GACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE--MK 147 (290)
T ss_pred EEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH--CC
Confidence 98776 788999999999999999865321 2358899999999999999999999 88
Q ss_pred eEecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-C
Q psy520 304 IIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-G 381 (455)
Q Consensus 304 iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G 381 (455)
++||||||+|||+++++.+||+|||+++........ .......++..|+|||.+ ...++.++||||||+++|||++ |
T Consensus 148 ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g 226 (290)
T cd05045 148 LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY-VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 226 (290)
T ss_pred eehhhhhhheEEEcCCCcEEeccccccccccCccch-hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999998765332211 112233556789999965 4457889999999999999999 9
Q ss_pred CCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 382 MKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 382 ~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..||.............. .. ....+..++..+.+++.+|+..+|++||+++++++.|++++.
T Consensus 227 ~~p~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 227 GNPYPGIAPERLFNLLKT-GY----------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCCCCHHHHHHHHhC-CC----------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 999976653322222111 00 001112344568889999999999999999999999999874
No 110
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.2e-39 Score=315.36 Aligned_cols=254 Identities=24% Similarity=0.402 Sum_probs=195.4
Q ss_pred CcCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
|++.+.||+|+||.||+|.++ .+..||||+++.... . .....|.+|+.+++.++||||++++
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~------~~~~~~~~e~~~l~~l~~~~iv~~~ 75 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS------M------RERIEFLNEASVMKEFNCHHVVRLL 75 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC------H------HHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 455599999999999999864 246799999853211 0 0134588999999999999999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVNN-------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD 317 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~ 317 (455)
+++.+ ...++||||+++|+|.+++..... ...+++.++..++.|++.||.|||+ .+++||||||+||+++
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~vH~dlkp~Nil~~ 153 (277)
T cd05062 76 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVA 153 (277)
T ss_pred EEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCcchheEEEc
Confidence 98877 788999999999999999976332 2346788999999999999999999 8899999999999999
Q ss_pred CCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHH
Q psy520 318 ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYY 395 (455)
Q Consensus 318 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~ 395 (455)
+++.+||+|||+++........ .......++..|+|||.+. +.++.++|||||||++|||++ |..||..........
T Consensus 154 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~ 232 (277)
T cd05062 154 EDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLR 232 (277)
T ss_pred CCCCEEECCCCCccccCCccee-ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999998755432211 1112235577899999764 467899999999999999999 789997655322222
Q ss_pred HHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
...... .. ..+...+..+.+++.+||..+|++||++.++++.|++
T Consensus 233 ~~~~~~--~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVMEGG--LL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHcCC--cC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 111111 00 0112334568889999999999999999999998863
No 111
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.1e-39 Score=336.41 Aligned_cols=255 Identities=22% Similarity=0.302 Sum_probs=189.0
Q ss_pred CCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 169 KPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
...|+++++||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||++++++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----------------~~~~~Ei~il~~l~h~niv~l~~~ 127 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----------------QYKNRELLIMKNLNHINIIFLKDY 127 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----------------chHHHHHHHHHhcCCCCCcceeee
Confidence 345677899999999999999986 48899999885321 114579999999999999999885
Q ss_pred ccC---------cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC
Q psy520 248 CNN---------IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD 317 (455)
Q Consensus 248 ~~~---------~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~ 317 (455)
+.. ...++||||++ ++|.+++.... ....+++..+..++.|++.||+|||+ ++|+||||||+|||++
T Consensus 128 ~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~--~~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 128 YYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS--KFICHRDLKPQNLLID 204 (440)
T ss_pred EeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCcCHHHEEEc
Confidence 421 23568999996 57877765432 24579999999999999999999999 8999999999999999
Q ss_pred CCC-ceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHH
Q psy520 318 ENF-VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYY 394 (455)
Q Consensus 318 ~~~-~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~ 394 (455)
.++ .+||+|||+++....... .....||+.|+|||++.+ .++.++|||||||++|||++|.+||.+.......
T Consensus 205 ~~~~~vkL~DFGla~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~ 280 (440)
T PTZ00036 205 PNTHTLKLCDFGSAKNLLAGQR----SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL 280 (440)
T ss_pred CCCCceeeeccccchhccCCCC----cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 664 799999999986543221 224578999999997644 5789999999999999999999999876532221
Q ss_pred HHHHh--cccchhhh-------cc--------hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 395 YLVVE--QEVPVREV-------LD--------KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 395 ~~~~~--~~~~~~~~-------~d--------~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+.. +....... .+ .......+...+..+.+||.+||..||.+||++.|+++
T Consensus 281 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 281 VRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 11111 11110000 00 00000011123456889999999999999999999874
No 112
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.5e-40 Score=332.33 Aligned_cols=252 Identities=22% Similarity=0.274 Sum_probs=191.1
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||+||+|+... ++.||||++...... .......+.+|+.++++++||||+++++.+.+
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~----------~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~ 72 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL----------LRNQVAHVKAERDILAEADNEWVVRLYYSFQD 72 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh----------hHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe
Confidence 4566899999999999999864 789999999643210 01124568899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|||||++|+|.+++.+. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~--~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 73 KDNLYFVMDYIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 7889999999999999999763 468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCc--------------------------------------------ccceeccCCCCCCcCCccccc-CCCCC
Q psy520 330 VKMSETSNM--------------------------------------------KTMYTENLTGTRPYMPPEAMH-CQIST 364 (455)
Q Consensus 330 a~~~~~~~~--------------------------------------------~~~~~~~~~gt~~Y~aPE~~~-~~~s~ 364 (455)
+........ .........||+.|+|||++. ..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 753211000 000112357999999999764 46789
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC---
Q psy520 365 KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS--- 441 (455)
Q Consensus 365 ~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs--- 441 (455)
++|||||||++|||++|.+||...+.......+....... .......++....++|.++| .+|.+|++
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~ 298 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSL--------HIPPQAKLSPEASDLIIKLC-RGPEDRLGKNG 298 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc--------CCCCcccCCHHHHHHHHHHc-cCHhHcCCCCC
Confidence 9999999999999999999998765433222221111000 00111223455677787776 48999987
Q ss_pred HHHHHH
Q psy520 442 MRDIVD 447 (455)
Q Consensus 442 ~~evl~ 447 (455)
+.++++
T Consensus 299 ~~ei~~ 304 (382)
T cd05625 299 ADEIKA 304 (382)
T ss_pred HHHHhc
Confidence 777654
No 113
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.8e-39 Score=310.69 Aligned_cols=248 Identities=25% Similarity=0.415 Sum_probs=196.2
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
|++.+.||+|+||.||+|.++++..||||.++.... . ...|.+|+.++++++||||+++++++.+
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~------~--------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 71 (256)
T cd05113 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM------S--------EDEFIEEAKVMMKLSHEKLVQLYGVCTKQ 71 (256)
T ss_pred eEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc------c--------HHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 345588999999999999987667799999864321 0 2348899999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+.+|+|.+++.... ..+++.+++.++.|++.||+|||+ ++++|+||||+||+++.++.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~nili~~~~~~kl~d~g~~ 147 (256)
T cd05113 72 RPIYIVTEYMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLES--KQFIHRDLAARNCLVDDQGCVKVSDFGLS 147 (256)
T ss_pred CCcEEEEEcCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEEcCCCCEEECCCccc
Confidence 67799999999999999987643 268999999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... .......++..|+|||.+. +.++.++|||||||++|+|++ |..||.................
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~------ 219 (256)
T cd05113 148 RYVLDDEY--TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR------ 219 (256)
T ss_pred eecCCCce--eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC------
Confidence 76543321 1112234567899999775 467889999999999999999 9999976553322222211110
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...+...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 220 -----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 -----LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0111123456888999999999999999999998764
No 114
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-39 Score=315.90 Aligned_cols=253 Identities=25% Similarity=0.428 Sum_probs=196.1
Q ss_pred cCCCcccccCCEEEEEEEEc-----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
++.++||+|+||.||+|.+. ++..||+|.+..... .. ....|.+|+.++++++||||++++++
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~------~~------~~~~~~~E~~~l~~l~h~niv~~~~~ 75 (283)
T cd05090 8 RFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN------PQ------QWGEFQQEASLMAELHHPNIVCLLGV 75 (283)
T ss_pred eeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC------HH------HHHHHHHHHHHHhhCCCCCeeeEEEE
Confidence 45589999999999999852 357899999864221 10 13458899999999999999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCC
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNN--------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 312 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~ 312 (455)
+.. ...|+||||+++++|.+++..... ...+++.++..++.|++.||.|||+ ++++||||||+
T Consensus 76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~ 153 (283)
T cd05090 76 VTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS--HFFVHKDLAAR 153 (283)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--cCeehhccccc
Confidence 766 788999999999999999864321 2347899999999999999999999 89999999999
Q ss_pred cEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCch
Q psy520 313 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNT 390 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~ 390 (455)
|||++.++.+||+|||+++....... ........++..|+|||.+. +.++.++|+|||||++|||++ |..||...+.
T Consensus 154 nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05090 154 NILIGEQLHVKISDLGLSREIYSADY-YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232 (283)
T ss_pred eEEEcCCCcEEeccccccccccCCcc-eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999999886543321 11223345677899999764 567899999999999999999 9999976553
Q ss_pred hhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
........... .. ..+..++..+.+++.+|+..+|.+||++.++.+.|..
T Consensus 233 ~~~~~~~~~~~--~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 QEVIEMVRKRQ--LL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHcCC--cC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 22211111111 00 0112234558889999999999999999999998864
No 115
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1e-39 Score=324.37 Aligned_cols=237 Identities=24% Similarity=0.350 Sum_probs=184.8
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|..+. ++.||+|++++...... .....+.+|+.++.++ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~ 70 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD----------EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 70 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch----------hHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCE
Confidence 369999999999999864 78999999975432111 0134477888888877 79999999998766 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 71 ~~lv~E~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~--~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~ 145 (329)
T cd05618 71 LFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 145 (329)
T ss_pred EEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEECCCCCEEEeeCCcccc
Confidence 8999999999999998876 3469999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCch---------hhHHHHHHhccc
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNT---------ILYYYLVVEQEV 402 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~---------~~~~~~~~~~~~ 402 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||..... ......+.....
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~ 222 (329)
T cd05618 146 GLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 222 (329)
T ss_pred ccCCC---CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC
Confidence 32221 11234679999999997654 578899999999999999999999963211 001111111111
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
.+ +...+..+.+||.+||..||++||++
T Consensus 223 ~~------------p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 RI------------PRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CC------------CCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 11 12334557889999999999999983
No 116
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.7e-40 Score=325.51 Aligned_cols=241 Identities=27% Similarity=0.358 Sum_probs=187.3
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHH-HHHHcCCCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEV-QTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||+||+|.++. ++.||+|++......... ....+..|. .+++.++||||+++++++.+ +.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~----------~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~ 70 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKK----------EEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 70 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhh----------HHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCe
Confidence 369999999999999874 788999999753221100 012233444 45788999999999998766 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~--~giiHrDlkp~Nili~~~~~~kl~DfG~a~~ 145 (325)
T cd05602 71 LYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCKE 145 (325)
T ss_pred EEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEEccCCCCcc
Confidence 8999999999999999986 3458889999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|.+||...+.......+.......
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~------- 215 (325)
T cd05602 146 NIEHN---GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL------- 215 (325)
T ss_pred cccCC---CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC-------
Confidence 33221 12345679999999997654 57889999999999999999999998766443333222211111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
...++..+.++|.+|+..+|.+||++.+.+
T Consensus 216 -----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 216 -----KPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred -----CCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 123445688999999999999999987443
No 117
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-39 Score=339.34 Aligned_cols=252 Identities=27% Similarity=0.334 Sum_probs=197.4
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||+||+|.+. +|+.||||++....... . ....+.+|+.++..++|+|+++++..+.
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~----~-------~~~~~~~Ei~~l~~~~h~~iv~~~~~~~ 101 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE----A-------DKNRAQAEVCCLLNCDFFSIVKCHEDFA 101 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH----H-------HHHHHHHHHHHHhcCCCCcEEEeeccee
Confidence 4566699999999999999875 48999999986543210 1 1445789999999999999999887543
Q ss_pred C---------cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC
Q psy520 250 N---------IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 250 ~---------~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
. ...++||||+++|+|.+++..... ..++++..+..++.|++.||.|||+ ++|+||||||+|||++.+
T Consensus 102 ~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~--~~IiHrDLKP~NILl~~~ 179 (496)
T PTZ00283 102 KKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS--KHMIHRDIKSANILLCSN 179 (496)
T ss_pred cccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEeCC
Confidence 2 135789999999999999875432 4578999999999999999999999 899999999999999999
Q ss_pred CceEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHH
Q psy520 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
+.+||+|||+++...... .........||+.|+|||++.+ .++.++|||||||++|||++|..||.............
T Consensus 180 ~~vkL~DFGls~~~~~~~-~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~ 258 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATV-SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL 258 (496)
T ss_pred CCEEEEecccCeeccccc-cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 999999999998654322 1122345689999999997754 57899999999999999999999998765432222221
Q ss_pred hcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 399 EQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... ..+..++..+.+++.+||..+|.+||++.++++
T Consensus 259 ~~~~~-----------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 259 AGRYD-----------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred cCCCC-----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 11100 011234556889999999999999999999876
No 118
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.8e-40 Score=330.77 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=191.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.++||+|+||+||++..+ +++.||||++....... ......+.+|++++++++||||+++++++.+
T Consensus 3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~ 72 (377)
T cd05629 3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFK----------KDQLAHVKAERDVLAESDSPWVVSLYYSFQD 72 (377)
T ss_pred ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHH----------hHHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Confidence 456689999999999999876 48899999986432110 1124568899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~--~givHrDlkp~NIll~~~~~~kl~DfGl 147 (377)
T cd05629 73 AQYLYLIMEFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHK--LGFIHRDIKPDNILIDRGGHIKLSDFGL 147 (377)
T ss_pred CCeeEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEECCCCCEEEeeccc
Confidence 788999999999999999976 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcc------------c--------------------------------ceeccCCCCCCcCCccccc-CCCCC
Q psy520 330 VKMSETSNMK------------T--------------------------------MYTENLTGTRPYMPPEAMH-CQIST 364 (455)
Q Consensus 330 a~~~~~~~~~------------~--------------------------------~~~~~~~gt~~Y~aPE~~~-~~~s~ 364 (455)
++........ . .......||+.|+|||++. ..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 227 (377)
T cd05629 148 STGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQ 227 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCC
Confidence 8633211000 0 0001246999999999764 45789
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCC---CCC
Q psy520 365 KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDK---RAS 441 (455)
Q Consensus 365 ~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~---RPs 441 (455)
++|||||||++|||++|..||...........+......+ .......++..+.+||.+|+. +|.+ |++
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 228 ECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETL--------YFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred ceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc--------CCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 9999999999999999999998765433322222111000 000111244568889999887 6554 569
Q ss_pred HHHHHH
Q psy520 442 MRDIVD 447 (455)
Q Consensus 442 ~~evl~ 447 (455)
+.++++
T Consensus 299 ~~~~l~ 304 (377)
T cd05629 299 AHEIKS 304 (377)
T ss_pred HHHHhc
Confidence 998875
No 119
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.9e-39 Score=312.04 Aligned_cols=252 Identities=26% Similarity=0.434 Sum_probs=196.8
Q ss_pred CCcccccCCEEEEEEEEcC-C---cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 175 GNKLGEGQFGTVYYGKLKN-G---MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~-~---~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.+.||+|+||.||+|.++. + ..+|+|.++.... .. ....+.+|++++++++|||++++.+++.+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~------~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT------EK------QRQDFLSEASIMGQFSHHNIIRLEGVVTK 77 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC------HH------HHHHHHHHHHHHhcCCCCCeeEEEEEEcc
Confidence 3899999999999999763 3 3689998864321 10 13458899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++.... ..+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~Nili~~~~~~kl~dfg~ 153 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSD--MNYVHRDLAARNILVNSNLECKVSDFGL 153 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEEcCCCcEEECCCcc
Confidence 78899999999999999987643 468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+..................+..|+|||.+. +.++.++|||||||++|||++ |..||...........+.. ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-~~~~--- 229 (268)
T cd05063 154 SRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-GFRL--- 229 (268)
T ss_pred ceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-CCCC---
Confidence 876644322111112223355799999664 467899999999999999998 9999976653322222211 1110
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.....++..+.+++.+|+..+|++||++.+|++.|++++
T Consensus 230 -------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 230 -------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 011224456789999999999999999999999999874
No 120
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.2e-39 Score=326.94 Aligned_cols=241 Identities=24% Similarity=0.312 Sum_probs=186.2
Q ss_pred CCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cc
Q psy520 175 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.++||+|+||.||+|++. +++.||||++..... . .....+.+|++++++++|+||+++++++.+ +.
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 146 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE------D------TVRRQICREIEILRDVNHPNVVKCHDMFDHNGE 146 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc------H------HHHHHHHHHHHHHHhCCCCCcceeeeEeccCCe
Confidence 478999999999999986 489999999854321 1 113558899999999999999999998877 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+.+|+|.+. ...++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 147 ~~lv~e~~~~~~L~~~-------~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~ 217 (353)
T PLN00034 147 IQVLLEFMDGGSLEGT-------HIADEQFLADVARQILSGIAYLHR--RHIVHRDIKPSNLLINSAKNVKIADFGVSRI 217 (353)
T ss_pred EEEEEecCCCCccccc-------ccCCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCEEEccccccee
Confidence 8999999999998653 235677888999999999999999 8999999999999999999999999999886
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-----C-CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-----Q-ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~-~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
...... ......||..|+|||.+.. . .+.++|||||||++|||++|..||..................
T Consensus 218 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--- 291 (353)
T PLN00034 218 LAQTMD---PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMS--- 291 (353)
T ss_pred cccccc---cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhcc---
Confidence 543211 1234579999999997642 2 345899999999999999999999844321111111000000
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
........++..+.+||.+||..||++||++.|+++
T Consensus 292 -----~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 292 -----QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -----CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000111234556889999999999999999999986
No 121
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.5e-39 Score=313.97 Aligned_cols=247 Identities=21% Similarity=0.275 Sum_probs=190.4
Q ss_pred ccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||+||++.++ +++.||+|++....... ......+..|+.++++++|+||+++.+++.. ...|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----------~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~l 70 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK----------RKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCL 70 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh----------hHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEE
Confidence 799999999999986 48899999986432210 0113457889999999999999999987766 78899
Q ss_pred EEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccccc
Q psy520 256 VYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
||||+++|+|.+++.... ....+++..++.++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||++....
T Consensus 71 v~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 148 (280)
T cd05608 71 VMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ--RRIIYRDLKPENVLLDNDGNVRISDLGLAVELK 148 (280)
T ss_pred EEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence 999999999998885432 24579999999999999999999999 899999999999999999999999999987654
Q ss_pred CCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhc
Q psy520 335 TSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAG 413 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 413 (455)
.... ......||+.|+|||++. +.++.++|+|||||++|||++|..||.............. .......
T Consensus 149 ~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~------~~~~~~~- 218 (280)
T cd05608 149 DGQS---KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ------RILNDSV- 218 (280)
T ss_pred CCCc---cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH------hhcccCC-
Confidence 3321 123457999999999765 4678899999999999999999999976542111100000 0000000
Q ss_pred CCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 414 EWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 414 ~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..+..++..+.+++.+||..||++|| +++++++
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 219 -TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred -CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 01123455688999999999999999 6777765
No 122
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.1e-39 Score=312.91 Aligned_cols=255 Identities=26% Similarity=0.424 Sum_probs=199.1
Q ss_pred cCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
.+.+.||+|+||.||++... ++..+|+|.+..... . ....+.+|++++++++||||+++++
T Consensus 8 ~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~i~~~~~ 74 (288)
T cd05093 8 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD------N-------ARKDFHREAELLTNLQHEHIVKFYG 74 (288)
T ss_pred eeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH------H-------HHHHHHHHHHHHHhCCCCCcceEEE
Confidence 45589999999999999852 245689998853211 1 1445889999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEE
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVN----------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 315 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NIL 315 (455)
++.. ...++||||+++++|.+++.... ....+++.++..++.|++.||.|||+ +|++||||||+||+
T Consensus 75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~--~~i~H~dlkp~Nil 152 (288)
T cd05093 75 VCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS--QHFVHRDLATRNCL 152 (288)
T ss_pred EEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcceEE
Confidence 8877 78899999999999999997542 12358999999999999999999999 89999999999999
Q ss_pred ECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhH
Q psy520 316 LDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILY 393 (455)
Q Consensus 316 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~ 393 (455)
+++++.+||+|||+++....... ........++..|+|||.+. ..++.++|+|||||++|||++ |.+||........
T Consensus 153 i~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~ 231 (288)
T cd05093 153 VGENLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 231 (288)
T ss_pred EccCCcEEeccCCccccccCCce-eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999876543221 11122345677899999765 457889999999999999998 9999976653322
Q ss_pred HHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 394 YYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 394 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
...+...... . .....+..+.+++.+|+..+|.+||++.+|.+.|+++.+
T Consensus 232 ~~~i~~~~~~--~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 232 IECITQGRVL--Q---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHHHcCCcC--C---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 2222211100 0 011233458899999999999999999999999998754
No 123
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.8e-40 Score=326.53 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=196.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||+||++..+ +|+.||||+++...... ......+..|+.+++.++||||+++++++.+
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~ 72 (330)
T cd05601 3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----------QETVSFFEEERDILSISNSPWIPQLQYAFQD 72 (330)
T ss_pred ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCCCcceeeEEec
Confidence 455689999999999999986 48899999997543211 1114558899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~--~~i~H~Dlkp~NIll~~~~~~kL~Dfg~ 148 (330)
T cd05601 73 KDNLYLVMEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQ--MGYVHRDIKPENVLIDRTGHIKLADFGS 148 (330)
T ss_pred CCeEEEEECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEcccCchHheEECCCCCEEeccCCC
Confidence 78899999999999999998742 369999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+........ .......||+.|+|||++. +.++.++|||||||++|||++|..||...........+.....
T Consensus 149 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~ 226 (330)
T cd05601 149 AARLTANKM--VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR 226 (330)
T ss_pred CeECCCCCc--eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC
Confidence 986543321 1223457999999999764 3467899999999999999999999987654332222211110
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ..+ .....++..+.+||.+|+. +|.+||++.++++
T Consensus 227 ~-~~~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 227 F-LKF-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred c-cCC-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 000 0112345568888999987 9999999999874
No 124
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.9e-39 Score=308.89 Aligned_cols=247 Identities=27% Similarity=0.430 Sum_probs=195.0
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+++.+.||+|+||.||+|.++++..+|+|.+..... . ...|.+|+.++++++||||+++++++.+
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~------~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM------S--------EDDFIEEAKVMMKLSHPNLVQLYGVCTKQ 71 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCCC------C--------HHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence 345589999999999999988777899999853221 0 2347889999999999999999998777
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~kl~dfg~~ 147 (256)
T cd05059 72 RPIFIVTEYMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLES--NGFIHRDLAARNCLVGEDNVVKVSDFGLA 147 (256)
T ss_pred CceEEEEecCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH--CCcccccccHhhEEECCCCcEEECCcccc
Confidence 77899999999999999997643 368999999999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......++..|+|||.+. +.++.++|+||||+++|||++ |..||...+........... ..
T Consensus 148 ~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~----- 219 (256)
T cd05059 148 RYVLDDQYT--SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-YR----- 219 (256)
T ss_pred eeccccccc--ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-Cc-----
Confidence 765432211 111223445799999764 567889999999999999999 89999765533222211111 00
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
...+..++..+.+++.+|+..+|++||++.++++.|
T Consensus 220 -----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 220 -----LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 011123455688999999999999999999999876
No 125
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.7e-39 Score=315.35 Aligned_cols=255 Identities=25% Similarity=0.405 Sum_probs=199.6
Q ss_pred cCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
.+.+.||+|+||.||+|.+. ++..+++|.+..... . ....|.+|++++++++|+||+++++
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~i~~~~~ 74 (291)
T cd05094 8 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL------A-------ARKDFQREAELLTNLQHEHIVKFYG 74 (291)
T ss_pred EEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH------H-------HHHHHHHHHHHHhcCCCCCcceEEE
Confidence 34588999999999999853 245689998753221 1 1345889999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCC
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 312 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~ 312 (455)
++.+ ...++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+ ++++||||||+
T Consensus 75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~ 152 (291)
T cd05094 75 VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS--QHFVHRDLATR 152 (291)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcc
Confidence 8877 788999999999999999976421 2348999999999999999999999 89999999999
Q ss_pred cEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCch
Q psy520 313 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNT 390 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~ 390 (455)
||+++.++.+||+|||++........ ........++..|+|||.+. ..++.++|||||||++|||+| |..||.....
T Consensus 153 Nil~~~~~~~~l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 231 (291)
T cd05094 153 NCLVGANLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 231 (291)
T ss_pred eEEEccCCcEEECCCCcccccCCCce-eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999876543321 11123345788899999664 467889999999999999999 9999977654
Q ss_pred hhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
........... .. ......+..+.+++.+|+..+|++||++.+|++.|+++.+
T Consensus 232 ~~~~~~~~~~~--~~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 232 TEVIECITQGR--VL---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHHHHhCCC--CC---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 33222221111 00 0112234568899999999999999999999999998753
No 126
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.8e-39 Score=308.85 Aligned_cols=256 Identities=21% Similarity=0.363 Sum_probs=197.0
Q ss_pred cCCCcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+++.||+|+||.||+|.+.. +..||||+++..... .. ....+.+|+..++.++||||+++++++
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~----~~-------~~~~~~~e~~~l~~l~h~~iv~~~~~~ 70 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT----YS-------EIEEFLSEAACMKDFDHPNVMKLIGVC 70 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC----HH-------HHHHHHHHHHHHHhCCCCCeeeEEeee
Confidence 456899999999999998752 367999998643221 01 134589999999999999999999976
Q ss_pred cC-c------ceeEEEEeccCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC
Q psy520 249 NN-I------MNCIVYEYMCNGSLYDRLARVN---NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 249 ~~-~------~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
.. . ..++++||+++|+|.+++.... ....+++..+..++.|++.||.|||+ .+++||||||+||++++
T Consensus 71 ~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~--~~i~H~dlkp~Nil~~~ 148 (273)
T cd05035 71 FEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN--RNFIHRDLAARNCMLRE 148 (273)
T ss_pred ccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh--CCeeccccchheEEECC
Confidence 54 2 3689999999999999986532 12468999999999999999999999 89999999999999999
Q ss_pred CCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHH
Q psy520 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
++.+||+|||+++......... ......++..|+|||.+. ..++.++|||||||++|||++ |..||...........
T Consensus 149 ~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~ 227 (273)
T cd05035 149 DMTVCVADFGLSKKIYSGDYYR-QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDY 227 (273)
T ss_pred CCeEEECCccceeecccccccc-ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9999999999988654432111 112234567899999765 457889999999999999999 9999976553322211
Q ss_pred HHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.... ... ..+..++..+.+++.+||..||++||++.+|++.|++++
T Consensus 228 ~~~~-~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 228 LRHG-NRL----------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred HHcC-CCC----------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 1111 000 011234456888999999999999999999999998864
No 127
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.4e-39 Score=313.04 Aligned_cols=265 Identities=25% Similarity=0.369 Sum_probs=196.5
Q ss_pred CCcCCCcccccCCEEEEEEEEc-----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
.+++.+.||+|+||.||+|..+ ++..||||+++.... . ....|.+|++++++++||||++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~iv~~~ 71 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA------E-------HLRDFEREIEILKSLQHDNIVKYK 71 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH------H-------HHHHHHHHHHHHHhCCCCCeeEEE
Confidence 4566689999999999999753 478999999864321 1 134588999999999999999999
Q ss_pred ccccC---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 246 GFCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 246 ~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
+++.. ...++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ +|++||||||+||+++.++.+
T Consensus 72 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~--~~i~H~dlkp~nili~~~~~~ 147 (284)
T cd05081 72 GVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGS--KRYVHRDLATRNILVESENRV 147 (284)
T ss_pred EEEccCCCCceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCCHhhEEECCCCeE
Confidence 96533 46789999999999999997532 358999999999999999999999 899999999999999999999
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcc
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 401 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 401 (455)
||+|||+++................++..|+|||.+. +.++.++|+|||||++|||++|..|+................
T Consensus 148 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd05081 148 KIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQ 227 (284)
T ss_pred EECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccc
Confidence 9999999987644321111112223445699999764 457889999999999999999987765433211110000000
Q ss_pred --cc---hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 402 --VP---VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 402 --~~---~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
.. +.+.+...........++..+.+|+.+||..+|++|||+.+|++.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 228 GQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00 0011111111112234556788999999999999999999999999875
No 128
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.9e-40 Score=316.66 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=197.5
Q ss_pred cCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++.++||+|+||.||+|.+.+ +..||||+++.... . .....|.+|+.++..++||||+++++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~~~~l~h~~iv~~~~ 75 (283)
T cd05091 8 RFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE------G------PLREEFKHEAMMRSRLQHPNIVCLLG 75 (283)
T ss_pred HHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC------H------HHHHHHHHHHHHHhcCCCCCcCeEEE
Confidence 445889999999999998642 47899999864321 0 01345889999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCC
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVN-------------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 312 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~ 312 (455)
++.+ ...++++||+.+++|.+++.... ....+++..+..++.|++.||.|||+ +|++||||||+
T Consensus 76 ~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~--~gi~H~dlkp~ 153 (283)
T cd05091 76 VVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS--HHVVHKDLATR 153 (283)
T ss_pred EEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--cCccccccchh
Confidence 8877 77889999999999999985321 12358889999999999999999999 89999999999
Q ss_pred cEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCch
Q psy520 313 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNT 390 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~ 390 (455)
||++++++.+||+|||+++........ .......+++.|+|||.+ .+.++.++|||||||++|||++ |..||.....
T Consensus 154 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 232 (283)
T cd05091 154 NVLVFDKLNVKISDLGLFREVYAADYY-KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 232 (283)
T ss_pred heEecCCCceEecccccccccccchhe-eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999998865433211 112334567889999965 5678899999999999999998 8889876553
Q ss_pred hhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
......+..... ...+..++..+.+|+.+|++.+|.+||++++|+..|+.
T Consensus 233 ~~~~~~i~~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNRQV-----------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcCCc-----------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 322222211110 01123455668899999999999999999999999875
No 129
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.9e-39 Score=315.61 Aligned_cols=251 Identities=21% Similarity=0.275 Sum_probs=195.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||+||++.+. +++.||||++........ .....+.+|+.++++++||||+++++.+.+
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 71 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------KGEAMALNEKQILEKVNSRFVVSLAYAYET 71 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh----------hhHHHHHHHHHHHHhcCCCCEeeeeeeecC
Confidence 455689999999999999976 488999999964322100 013447889999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||++++++.++|+|||+
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 72 KDALCLVLTLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHR--ERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred CCeEEEEEeccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 78899999999999999887543 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ .....|+..|+|||++. ..++.++|||||||++|||++|..||.............. .+
T Consensus 149 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~-------~~ 217 (285)
T cd05605 149 AVEIPEGET----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER-------RV 217 (285)
T ss_pred ceecCCCCc----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH-------Hh
Confidence 876543221 22457899999999764 4578899999999999999999999986543211111100 00
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
...... ....++..+.+|+.+|+..||.+|| +++++++
T Consensus 218 ~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 218 KEDQEE-YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred hhcccc-cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 000001 1123555688999999999999999 8888854
No 130
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.9e-39 Score=310.66 Aligned_cols=250 Identities=28% Similarity=0.417 Sum_probs=200.1
Q ss_pred cCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
.+.++||.|+||.||+|.+++++.+|+|.+..... . ....+.+|+.+++.++||||+++++++.+ .
T Consensus 9 ~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 75 (261)
T cd05148 9 TLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL------L-------KQQDFQKEVQALKRLRHKHLISLFAVCSVGE 75 (261)
T ss_pred HHhhhhccCCCccEEEeEecCCCcEEEEeccccch------h-------hHHHHHHHHHHHhcCCCcchhheeeeEecCC
Confidence 44589999999999999998889999999864321 0 13458899999999999999999998877 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++.... ...+++.++..++.|++.||+|||+ +|++||||||+||+++.++.+||+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~--~~i~h~dl~~~nilv~~~~~~kl~d~g~~~ 152 (261)
T cd05148 76 PVYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEE--QNSIHRDLAARNILVGEDLVCKVADFGLAR 152 (261)
T ss_pred CeEEEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccCcceEEEcCCceEEEccccchh
Confidence 7899999999999999998643 3568999999999999999999999 889999999999999999999999999987
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... ......++..|+|||.+. +.++.++|+||||+++|+|++ |..||............... ..
T Consensus 153 ~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~------ 222 (261)
T cd05148 153 LIKEDVY---LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YR------ 222 (261)
T ss_pred hcCCccc---cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-Cc------
Confidence 6543221 122345667899999664 467889999999999999998 89999766533222221111 00
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
...+...+..+.+++.+||..+|.+||++.++++.|+.+
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 ----MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 011223445688899999999999999999999999864
No 131
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.3e-40 Score=330.99 Aligned_cols=250 Identities=22% Similarity=0.291 Sum_probs=193.3
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.++. ++.||+|++.+...... .....+.+|+.+++.++||||+++++++.+
T Consensus 45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (370)
T cd05621 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKR----------SDSAFFWEERDIMAFANSPWVVQLFCAFQD 114 (370)
T ss_pred CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 4555899999999999999874 78999999864322110 113447889999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.. ..+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~--~~IvHrDLKp~NILl~~~~~~kL~DFG~ 188 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHS--MGLIHRDVKPDNMLLDKHGHLKLADFGT 188 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEECCCCCEEEEeccc
Confidence 788999999999999999865 248899999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccch
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
+........ .......||+.|+|||++.+ .++.++|+|||||++|||++|..||...........+......+
T Consensus 189 a~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 266 (370)
T cd05621 189 CMKMDETGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL 266 (370)
T ss_pred ceecccCCc--eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc
Confidence 886543221 11235679999999997743 26789999999999999999999998765433322222111110
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCC--CCCHHHHHH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDK--RASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~--RPs~~evl~ 447 (455)
.......++..+++++.+|+..++.+ |+++.++++
T Consensus 267 --------~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 267 --------NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred --------CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 00011234566888888888755443 899999876
No 132
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.1e-39 Score=321.79 Aligned_cols=259 Identities=23% Similarity=0.349 Sum_probs=196.4
Q ss_pred CCcCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceec
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.|++.++||+|+||.||+|.+. +++.||||+++..... . ....+.+|+.++.++ +||||++
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~-------~~~~~~~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-----S-------EHRALMSELKILIHIGHHLNVVN 75 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-----H-------HHHHHHHHHHHHHhccCCccHhh
Confidence 4677899999999999999742 3678999999643210 1 134578999999999 6899999
Q ss_pred ccccccC--cceeEEEEeccCCCHHHHHhhcCC-----------------------------------------------
Q psy520 244 LLGFCNN--IMNCIVYEYMCNGSLYDRLARVNN----------------------------------------------- 274 (455)
Q Consensus 244 l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------- 274 (455)
+++++.. ...++||||+++|+|.+++.....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 9997754 467899999999999999875321
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCC
Q psy520 275 -----------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 337 (455)
Q Consensus 275 -----------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 337 (455)
...+++.++..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||++.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCccCeEEEcCCCcEEEEecccccccccCc
Confidence 1247888999999999999999999 899999999999999999999999999987653321
Q ss_pred cccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCC
Q psy520 338 MKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEW 415 (455)
Q Consensus 338 ~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 415 (455)
. ........++..|+|||.+ ...++.++||||||+++|+|++ |..||................... .
T Consensus 234 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------~---- 302 (343)
T cd05103 234 D-YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM------R---- 302 (343)
T ss_pred c-hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC------C----
Confidence 1 1112234466789999965 4567899999999999999997 999997654221111111111000 0
Q ss_pred ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 416 NETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 416 ~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.+...+..+.+++..|+..+|.+||++.+|++.|++++.
T Consensus 303 ~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 303 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011123347788899999999999999999999999875
No 133
>KOG0594|consensus
Probab=100.00 E-value=2.8e-39 Score=307.48 Aligned_cols=256 Identities=23% Similarity=0.315 Sum_probs=197.6
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcc-eecccccccC-c-
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN-LLRLLGFCNN-I- 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~-~- 251 (455)
++||+|+||+||+|+.+ +|+.||+|+++....... ......+|+.++++++|+| ||.+++++.. .
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-----------~P~taiREisllk~L~~~~~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-----------VPSTAIREISLLKRLSHANHIVRLHDVIHTSNN 85 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC-----------CCchhhHHHHHHHHhCCCcceEEEEeeeeeccc
Confidence 67999999999999987 489999999986544211 1222579999999999999 9999998766 4
Q ss_pred -----ceeEEEEeccCCCHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEc
Q psy520 252 -----MNCIVYEYMCNGSLYDRLARVNNT-PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 252 -----~~~lV~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
..++|+||+ .-+|..++...... ..++...+..++.|+++||.|||+ ++|+||||||+||||+++|.+||+
T Consensus 86 ~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~--~~IlHRDLKPQNlLi~~~G~lKla 162 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS--HGILHRDLKPQNLLISSSGVLKLA 162 (323)
T ss_pred ccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCcceEEECCCCcEeee
Confidence 667999999 68999999875532 357778999999999999999999 899999999999999999999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--c-
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--Q- 400 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~- 400 (455)
|||+|+....... ....-++|..|.|||++.| .+++.+||||+|||++||+++++.|.+......-..+.. +
T Consensus 163 DFGlAra~~ip~~---~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGt 239 (323)
T KOG0594|consen 163 DFGLARAFSIPMR---TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGT 239 (323)
T ss_pred ccchHHHhcCCcc---cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCC
Confidence 9999996653321 1345578999999997755 478999999999999999999999998875444444433 1
Q ss_pred --ccchhh---hcchh--hcCCC-hhHHH-------HHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 401 --EVPVRE---VLDKE--AGEWN-ETHVE-------TLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 401 --~~~~~~---~~d~~--~~~~~-~~~~~-------~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+...+. ..+-+ ...|. +.... ....+++.+|+..+|.+|.|++..++.
T Consensus 240 P~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 240 PNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111111 11111 12222 11111 357789999999999999999998763
No 134
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.3e-40 Score=332.92 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=191.9
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||+++.+. ++.||||++....... ......+.+|+.++++++||||+++++.+.+
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~----------~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~ 72 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM----------RNQAAHVKAERDILAEADNEWVVKLYYSFQD 72 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh----------hhhHHHHHHHHHHHHhCCCCCcceEEEEEEc
Confidence 5667999999999999999764 8899999986432110 1113457899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nill~~~~~ikL~DFG~ 147 (376)
T cd05598 73 KDNLYFVMDYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (376)
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence 888999999999999999977 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCc----------------------------------------ccceeccCCCCCCcCCcccccC-CCCChhhH
Q psy520 330 VKMSETSNM----------------------------------------KTMYTENLTGTRPYMPPEAMHC-QISTKTDV 368 (455)
Q Consensus 330 a~~~~~~~~----------------------------------------~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi 368 (455)
+........ .........||+.|+|||++.+ .++.++||
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 227 (376)
T cd05598 148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW 227 (376)
T ss_pred CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceee
Confidence 753210000 0000123579999999997754 57889999
Q ss_pred HHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC---CHHHH
Q psy520 369 FSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA---SMRDI 445 (455)
Q Consensus 369 ~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP---s~~ev 445 (455)
|||||++|||++|..||...........+....... .......++..+.++|.+|| .+|.+|+ ++.++
T Consensus 228 wSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--------~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 228 WSVGVILYEMLVGQPPFLADTPAETQLKVINWETTL--------HIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred eeccceeeehhhCCCCCCCCCHHHHHHHHhccCccc--------cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 999999999999999998766433222221111000 00011224455777787765 5999999 88888
Q ss_pred HH
Q psy520 446 VD 447 (455)
Q Consensus 446 l~ 447 (455)
++
T Consensus 299 l~ 300 (376)
T cd05598 299 KA 300 (376)
T ss_pred hC
Confidence 75
No 135
>KOG0599|consensus
Probab=100.00 E-value=4.1e-40 Score=300.61 Aligned_cols=250 Identities=26% Similarity=0.417 Sum_probs=209.9
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||.|..++|.++..+ +|+.+|+|++.......... ......+.-.+|+.||+++ .||||+.+.+++.. ..
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e-----~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGE-----TPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCc-----cHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 88999999999998876 48999999997655432221 1223356677899999998 69999999998877 67
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++|+|.|+.|.|+|+|.. .-.+++....+|+.|+..|+.|||. ++||||||||+|||+|++..+||+|||++..
T Consensus 98 ~FlVFdl~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeylHa--~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYLHA--RNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred hhhhhhhcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHHHH--hhhhhcccChhheeeccccceEEeccceeec
Confidence 7899999999999999998 4569999999999999999999999 8899999999999999999999999999988
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-------CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-------QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
...... ....+|||+|+|||.+.. +++..+|+||+|||+|.+|.|.+||....+..+...+..+...+.
T Consensus 173 l~~Gek----LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~ 248 (411)
T KOG0599|consen 173 LEPGEK----LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFR 248 (411)
T ss_pred cCCchh----HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccC
Confidence 766542 346799999999997743 467799999999999999999999998888777777766544332
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...-.+++...++||.+|+..||.+|.|++|++.
T Consensus 249 --------speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 249 --------SPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred --------CcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1122456777999999999999999999999875
No 136
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.5e-39 Score=310.85 Aligned_cols=259 Identities=23% Similarity=0.335 Sum_probs=202.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|..+ +++.||||.+....... ......|.+|+.+++.++||||+++++++.+
T Consensus 4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 73 (267)
T cd08229 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMD----------AKARADCIKEIDLLKQLNHPNVIKYYASFIE 73 (267)
T ss_pred hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhh----------HHHHHHHHHHHHHHHHccCCchhhhhheeEe
Confidence 345588999999999999975 58999999886432110 0113468899999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+..+++|||+++++|.+++..... ...+++.+++.++.+++.||.|||+ +|++|+||||+||+++.++.++|+|||
T Consensus 74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 74 DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCCEEECcch
Confidence 788999999999999998875332 4568999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......|+..|+|||.+. ...+.++|+||||+++|+|++|..||................
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------ 222 (267)
T cd08229 152 LGRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ------ 222 (267)
T ss_pred hhhccccCCc---ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhc------
Confidence 9876543221 123456889999999764 457889999999999999999999997544221111110000
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
......+....+..+.+++.+|+..+|++||++.+|++.++++.
T Consensus 223 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 223 --CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred --CCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00011122345667999999999999999999999999998864
No 137
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.3e-39 Score=310.53 Aligned_cols=255 Identities=25% Similarity=0.405 Sum_probs=199.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||+|.+.. +..+|+|.++.... .. ....|.+|+.++++++||||++++++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~------~~------~~~~~~~e~~~l~~l~h~~i~~~~~~ 73 (267)
T cd05066 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT------EK------QRRDFLSEASIMGQFDHPNIIHLEGV 73 (267)
T ss_pred eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC------HH------HHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 4556899999999999998752 34799999864221 10 13458899999999999999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...++||||+++++|.+++.... ..+++.++..++.|++.||.|||+ .+++||||||+|||++.++.+||+|
T Consensus 74 ~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~--~~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 74 VTKSKPVMIVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSD--MGYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred EecCCccEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEeehhhchhcEEECCCCeEEeCC
Confidence 766 78899999999999999997643 368999999999999999999999 8899999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccch
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||+++................++..|+|||.+. +.++.++|+|||||++||+++ |..||............... ...
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~ 228 (267)
T cd05066 150 FGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-YRL 228 (267)
T ss_pred CCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-CcC
Confidence 999887654321111122233456899999775 467899999999999999887 99999876533222222111 110
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.....++..+.+++.+|+..+|.+||++.++++.|++++
T Consensus 229 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 229 ----------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred ----------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 011223456788999999999999999999999998864
No 138
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.1e-39 Score=313.99 Aligned_cols=246 Identities=23% Similarity=0.301 Sum_probs=188.9
Q ss_pred ccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||.||++..+. |+.||+|++......... ....+..|++++++++||||+++++++.+ ...++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~----------~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~l 70 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKS----------GEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCL 70 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcch----------hhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEE
Confidence 7999999999999764 899999999643221110 12335679999999999999999987766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||++|++|.+++.... ...+++..+..++.|++.||+|||+ .|++||||||+||+++.++.++|+|||++.....
T Consensus 71 v~e~~~g~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~ 147 (277)
T cd05607 71 VMSLMNGGDLKYHIYNVG-ERGLEMERVIHYSAQITCGILHLHS--MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD 147 (277)
T ss_pred EEecCCCCCHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHH--CCEEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence 999999999999886543 3458999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcC
Q psy520 336 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGE 414 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 414 (455)
.. ......||..|+|||++. +.++.++|+|||||++|||++|..||.............. ....... .
T Consensus 148 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~------~~~~~~~-~ 216 (277)
T cd05607 148 GK----TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR------RTLEDEV-K 216 (277)
T ss_pred Cc----eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH------Hhhcccc-c
Confidence 22 122357899999999764 4578899999999999999999999975432111000000 0000000 0
Q ss_pred CChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 415 WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 415 ~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....++..+.+|+.+||..||++||++.|+++
T Consensus 217 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 217 FEHQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred cccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 111234556889999999999999999977654
No 139
>KOG0610|consensus
Probab=100.00 E-value=2.1e-39 Score=311.51 Aligned_cols=249 Identities=25% Similarity=0.333 Sum_probs=201.9
Q ss_pred CCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cc
Q psy520 175 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.++||.|.-|+||++++++ +..+|+|++.+..... .....+...|-+||+.++||.++.||+.+.. ..
T Consensus 82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~----------rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~ 151 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS----------RKKLKRAQTEREILSLLDHPFLPTLYASFETDKY 151 (459)
T ss_pred HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh----------hhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence 3889999999999999985 5889999997654422 2235667889999999999999999997766 88
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|||||||+||+|...++++. +..+++..++.++.+++.||+|||- .|||+|||||+||||-++|++.|+||.|+..
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHm--lGivYRDLKPENILvredGHIMLsDFDLS~~ 228 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHM--LGIVYRDLKPENILVREDGHIMLSDFDLSLR 228 (459)
T ss_pred eEEEEecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHh--hceeeccCCcceeEEecCCcEEeeecccccc
Confidence 899999999999999888765 4679999999999999999999999 7899999999999999999999999988643
Q ss_pred ccCC--------------------------------C-c--------------------ccceeccCCCCCCcCCccccc
Q psy520 333 SETS--------------------------------N-M--------------------KTMYTENLTGTRPYMPPEAMH 359 (455)
Q Consensus 333 ~~~~--------------------------------~-~--------------------~~~~~~~~~gt~~Y~aPE~~~ 359 (455)
.... . . .......++||-.|+|||++.
T Consensus 229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~ 308 (459)
T KOG0610|consen 229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR 308 (459)
T ss_pred CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence 2110 0 0 001123468999999999887
Q ss_pred C-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCC
Q psy520 360 C-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDK 438 (455)
Q Consensus 360 ~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~ 438 (455)
| +-+.++|+|+|||++||||.|..||.+.+.......+..++..++ ....++...+|||.++|.+||++
T Consensus 309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp----------~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFP----------EEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCC----------CCCcchhHHHHHHHHHhccChhh
Confidence 7 468899999999999999999999998876555544443333322 12256677999999999999999
Q ss_pred CCC----HHHHH
Q psy520 439 RAS----MRDIV 446 (455)
Q Consensus 439 RPs----~~evl 446 (455)
|.. ++||-
T Consensus 379 Rlg~~rGA~eIK 390 (459)
T KOG0610|consen 379 RLGSKRGAAEIK 390 (459)
T ss_pred hhccccchHHhh
Confidence 988 66664
No 140
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.9e-39 Score=313.87 Aligned_cols=267 Identities=25% Similarity=0.436 Sum_probs=198.8
Q ss_pred CCcCCCcccccCCEEEEEEEEc-----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
+|.+.+.||+|+||.||++.+. ++..||+|.++..... . ....+.+|+.+++++.|||+++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~-----~-------~~~~~~~e~~~l~~l~h~~i~~~~ 72 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG-----N-------HIADLKKEIEILRNLYHENIVKYK 72 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccH-----H-------HHHHHHHHHHHHHhCCCCCeeeee
Confidence 4566799999999999999742 3788999998643210 0 134588999999999999999999
Q ss_pred ccccC---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 246 GFCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 246 ~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
+++.+ ...++||||++|++|.+++.... ..+++..+..++.|++.||+|||+ +|++||||||+||+++.++.+
T Consensus 73 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~--~gi~H~dlkp~Nil~~~~~~~ 148 (284)
T cd05079 73 GICTEDGGNGIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGS--RQYVHRDLAARNVLVESEHQV 148 (284)
T ss_pred eEEecCCCCceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecccchheEEEcCCCCE
Confidence 98765 45689999999999999987632 368999999999999999999999 899999999999999999999
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHH-Hhc
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV-VEQ 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~-~~~ 400 (455)
||+|||+++................|+..|+|||.+. +.++.++|||||||++|||+|+..|............. ...
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd05079 149 KIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG 228 (284)
T ss_pred EECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccc
Confidence 9999999886644322111223456777899999654 46788999999999999999987765432111100000 000
Q ss_pred ccchhh---hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 401 EVPVRE---VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 401 ~~~~~~---~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
...... .+...........++..+.+|+.+||..+|++||++.++++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 229 QMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred cccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 000000 00000111112345667889999999999999999999999999874
No 141
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.5e-39 Score=310.98 Aligned_cols=249 Identities=25% Similarity=0.354 Sum_probs=194.3
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|+.. +++.||+|++..... .. ...+.+|+.++++++||||+++++++..
T Consensus 11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------~~-------~~~~~~e~~~l~~~~h~~ii~~~~~~~~ 77 (267)
T cd06646 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG------DD-------FSLIQQEIFMVKECKHCNIVAYFGSYLS 77 (267)
T ss_pred cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc------ch-------HHHHHHHHHHHHhcCCCCeeeeeEEEEe
Confidence 566799999999999999975 478999999864321 11 2347789999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++.. ..++++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nill~~~~~~~l~dfg~ 152 (267)
T cd06646 78 REKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHS--KGKMHRDIKGANILLTDNGDVKLADFGV 152 (267)
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCCEEECcCcc
Confidence 788999999999999999876 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc----CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
+....... .......|+..|+|||.+. +.++.++|+|||||++|||++|..||....................
T Consensus 153 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T cd06646 153 AAKITATI---AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPP 229 (267)
T ss_pred ceeecccc---cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCC
Confidence 87653221 1122356889999999763 3467899999999999999999999975542211111110100000
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.. .....++..+.+++.+||..+|++||+++++++.
T Consensus 230 -----~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 230 -----KL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred -----CC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00 0112345678899999999999999999999864
No 142
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.9e-39 Score=326.52 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=197.4
Q ss_pred CCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceecccc
Q psy520 174 RGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLG 246 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~ 246 (455)
++++||+|+||.||+|++. .+..||||+++..... . ....+.+|+.++.++. ||||+++++
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-----~-------~~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-----S-------EKQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-----h-------HHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 4589999999999999864 2468999999643210 0 1345889999999997 999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCC---------------------------------------------------
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNN--------------------------------------------------- 274 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~--------------------------------------------------- 274 (455)
++.. ...++||||+++|+|.++++....
T Consensus 109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 8877 788999999999999999975321
Q ss_pred --------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCC
Q psy520 275 --------------------------------------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 310 (455)
Q Consensus 275 --------------------------------------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dik 310 (455)
...+++..+..++.|++.||.|||+ ++++|||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrdlk 266 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS--KNCVHRDLA 266 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc--CCcCcccCC
Confidence 1347788899999999999999999 899999999
Q ss_pred CCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q psy520 311 SANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDN 388 (455)
Q Consensus 311 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~ 388 (455)
|+|||+++++.+||+|||+++........ .......++..|+|||.+. +.++.++|||||||++|||++ |..||...
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~ 345 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPEL 345 (401)
T ss_pred cceEEEeCCCEEEEEecCcceeccccccc-ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999998764322111 1112345778899999664 457889999999999999998 89999765
Q ss_pred chhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 389 NTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
................ ..+..++..+.+++.+||..+|.+||++++|++.|++++
T Consensus 346 ~~~~~~~~~~~~~~~~----------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 346 PMNEQFYNAIKRGYRM----------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CchHHHHHHHHcCCCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 4222111111111100 011234566889999999999999999999999999876
No 143
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.5e-39 Score=322.41 Aligned_cols=239 Identities=25% Similarity=0.349 Sum_probs=186.2
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHH-HHHcCCCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ-TLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||+||+|..+ +|+.||||++........ .....+..|.. +++.++||||+++++++.. +.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~ 70 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNR----------KEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEK 70 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCE
Confidence 36999999999999976 489999999975422110 01233455554 5678999999999987766 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~--~givH~Dlkp~NIll~~~~~~kL~DfG~~~~ 145 (325)
T cd05604 71 LYFVLDFVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS--INIVYRDLKPENILLDSQGHVVLTDFGLCKE 145 (325)
T ss_pred EEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEEeecCCccc
Confidence 8999999999999998876 3468999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+...............
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~------- 215 (325)
T cd05604 146 GIAQS---DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVL------- 215 (325)
T ss_pred CCCCC---CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccC-------
Confidence 32221 11235679999999997754 57889999999999999999999998765433322222211111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRD 444 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~e 444 (455)
....+..+.++|.+|+..+|.+||++.+
T Consensus 216 -----~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 216 -----RPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred -----CCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 0123445778899999999999998864
No 144
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.2e-39 Score=319.97 Aligned_cols=240 Identities=24% Similarity=0.316 Sum_probs=188.7
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-CcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 250 (455)
+..+.||+|+||+||+|..+ +|+.||||+++....... .....+..|..++..+. |++|+++++++.+
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~ 72 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQD----------DDVECTMVEKRVLALQDKPPFLTQLHSCFQT 72 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhccCCCchhheeeEEec
Confidence 34488999999999999976 488999999975422111 11345778899998886 5677788887666
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||+++|+|.+++.. ...+++.++..++.|++.||.|||+ +|++||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~--~~ivHrDikp~Nill~~~~~ikL~Dfg~ 147 (323)
T cd05615 73 VDRLYFVMEYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHR--RGIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred CCEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEecccc
Confidence 788999999999999999876 3469999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++...... .......||+.|+|||++.+ .++.++|+|||||++|||++|..||...........+.......+
T Consensus 148 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p--- 221 (323)
T cd05615 148 CKEHMVDG---VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP--- 221 (323)
T ss_pred ccccCCCC---ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---
Confidence 87543221 12334679999999997654 578899999999999999999999987664433333222221111
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
..++..+.+++.+||..+|.+|++.
T Consensus 222 ---------~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 ---------KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---------ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1234457889999999999999985
No 145
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.7e-39 Score=308.24 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=188.3
Q ss_pred CcccccCCEEEEEEEEcC---CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 176 NKLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+.||+|+||.||+|.+.+ +..+|+|.++.... .. ....|.+|+.++++++||||+++++++.+ .
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~------~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 68 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS------VQ------EQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT 68 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC------hH------HHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 359999999999998753 45789998864321 00 12358899999999999999999998877 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
..++||||+++|+|.+++..... ...+++..+..++.|++.|+.|||+ .+++|+||||+||+++.++.+||+|||+
T Consensus 69 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dlkp~nil~~~~~~~kL~dfg~ 146 (269)
T cd05087 69 PYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK--NNFIHSDLALRNCLLTADLTVKIGDYGL 146 (269)
T ss_pred CcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEEcCCCcEEECCccc
Confidence 78999999999999999976432 2356778888999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--------CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHH-HHHHh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--------QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYY-YLVVE 399 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~-~~~~~ 399 (455)
++....... ........|+..|+|||++.+ .++.++|+||||+++|||++ |..||......... .....
T Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 225 (269)
T cd05087 147 SHNKYKEDY-YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE 225 (269)
T ss_pred cccccCcce-eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc
Confidence 875433221 111234567888999997743 24779999999999999996 99999765532221 11111
Q ss_pred cccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 400 QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 400 ~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
.... ..++. .....+..+.+++.+|+ .+|++||++++|+..|+
T Consensus 226 ~~~~---~~~~~----~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 226 QQLK---LPKPR----LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ccCC---CCCCc----cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1111 11111 11123345777888887 68999999999998874
No 146
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.9e-39 Score=314.07 Aligned_cols=262 Identities=24% Similarity=0.349 Sum_probs=195.9
Q ss_pred CCcCCCcccccCCEEEEEEEEcC---------------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN---------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ 235 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~---------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 235 (455)
.|++.++||+|+||.||++...+ ...||+|+++.... . .....|.+|++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~------~------~~~~~~~~ei~~l~~ 73 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT------K------TARNDFLKEIKIMSR 73 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC------H------HHHHHHHHHHHHHHh
Confidence 56777999999999999987642 22589999864321 1 013458899999999
Q ss_pred CCCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeE
Q psy520 236 CKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN---------TPPLDSNKRYSIALGVAEALHYLHSLSKPII 305 (455)
Q Consensus 236 l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~ii 305 (455)
++|+|++++++++.. ...++||||+++++|.+++..... ...+++..++.++.|++.||+|||+ .+++
T Consensus 74 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~ 151 (295)
T cd05097 74 LKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS--LNFV 151 (295)
T ss_pred CCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh--cCee
Confidence 999999999998877 788999999999999999865321 1347899999999999999999999 8999
Q ss_pred ecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc--CC
Q psy520 306 HRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT--GM 382 (455)
Q Consensus 306 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt--G~ 382 (455)
||||||+||+++.++.+||+|||++........ ........++..|+|||.+ .+.++.++|+|||||++|+|++ |.
T Consensus 152 H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~ 230 (295)
T cd05097 152 HRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE 230 (295)
T ss_pred ccccChhhEEEcCCCcEEecccccccccccCcc-eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999876543221 1112234557789999965 5568999999999999999998 67
Q ss_pred CCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.||.............. .............+...+..+.+|+.+|+..+|++||++++|++.|++
T Consensus 231 ~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 231 QPYSLLSDEQVIENTGE----FFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred CCCcccChHHHHHHHHH----hhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 78876542211111100 000000000000111234568899999999999999999999999864
No 147
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.8e-39 Score=307.41 Aligned_cols=253 Identities=26% Similarity=0.403 Sum_probs=192.4
Q ss_pred CcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 176 NKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.||+|+||.||+|.+.+ +..||+|.+..... . .....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD------L------EEVEQFLKEGIIMKDFSHPNVLSLLGICLPS 68 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC------H------HHHHHHHHHHHHHccCCCCCcceEEEEeecC
Confidence 368999999999998642 35799998753211 0 014558899999999999999999997643
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+.+|+|.+++.... ..+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlk~~nili~~~~~~kl~dfg~ 144 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLAS--KKFVHRDLAARNCMLDESFTVKVADFGL 144 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEEcCCCcEEECCccc
Confidence 56789999999999999997643 346788889999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccc-eeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhh
Q psy520 330 VKMSETSNMKTM-YTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++.......... ......++..|+|||.+ .+.++.++|||||||++|||++ |.+||..................
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~--- 221 (262)
T cd05058 145 ARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL--- 221 (262)
T ss_pred cccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC---
Confidence 875543221111 11234567789999966 4567889999999999999999 56677655432222111111000
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhcC
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
..+...+..+.+++.+||..+|++||++.+|++.|++++.+
T Consensus 222 --------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~~ 262 (262)
T cd05058 222 --------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFST 262 (262)
T ss_pred --------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhcC
Confidence 00112344588899999999999999999999999998764
No 148
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.2e-38 Score=305.71 Aligned_cols=259 Identities=24% Similarity=0.333 Sum_probs=202.9
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|... +|+.||+|.++........ ....+.+|++++++++|+|++++++++.+
T Consensus 4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~----------~~~~~~~ei~~l~~~~~~~i~~~~~~~~~ 73 (267)
T cd08224 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAK----------ARQDCLKEIDLLKQLDHPNVIKYLASFIE 73 (267)
T ss_pred eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchh----------hHHHHHHHHHHHHhCCCCCeeeeeeeeec
Confidence 445589999999999999987 5899999998743321111 13458899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+..++||||+++|+|.+++..... ...+++.++..++.+++.||.|||+ .|++||||||+||+++.++.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 74 NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS--KRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecCCcChhhEEECCCCcEEEeccc
Confidence 788999999999999999875332 4568999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+++....... ......|+..|+|||.+. ..++.++|+|||||++|+|++|..||..................
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---- 224 (267)
T cd08224 152 LGRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD---- 224 (267)
T ss_pred eeeeccCCCc---ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC----
Confidence 9876543221 123356888999999664 45788999999999999999999999755422111111000000
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
....+...++..+.++|.+||..+|.+||++.+|++.|+++.
T Consensus 225 ----~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 ----YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ----CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 011122245566889999999999999999999999998864
No 149
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.1e-39 Score=319.62 Aligned_cols=238 Identities=26% Similarity=0.323 Sum_probs=185.4
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHH-HHHHcCCCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEV-QTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
++||+|+||.||+|++.. ++.||+|++.+...... .....+..|. .+++.++||||+++++++.+ ..
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~ 70 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKK----------KEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEK 70 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHh----------hHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCE
Confidence 369999999999999864 78999999975322110 0123344554 46788999999999997766 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++.. ...+++.++..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~--~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 145 (321)
T cd05603 71 LYFVLDYVNGGELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHS--LNIIYRDLKPENILLDSQGHVVLTDFGLCKE 145 (321)
T ss_pred EEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEccCCCCcc
Confidence 8999999999999998876 3468899999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...+.......+......+
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~------- 215 (321)
T cd05603 146 GVEPE---ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQL------- 215 (321)
T ss_pred CCCCC---CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCC-------
Confidence 32221 12345679999999997654 57889999999999999999999998766433322222111111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
+...+..+.++|.+|+..+|.+||+..
T Consensus 216 -----~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 -----PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -----CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 112334578899999999999999764
No 150
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.3e-39 Score=316.39 Aligned_cols=257 Identities=27% Similarity=0.395 Sum_probs=197.9
Q ss_pred CcCCCcccccCCEEEEEEEEcC--------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCccee
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN--------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLL 242 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 242 (455)
|.+++.||+|+||.||++.+.. +..||+|.++.... .. ....+.+|+.+++++ +||||+
T Consensus 20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-----~~-------~~~~~~~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-----EK-------DLSDLISEMEMMKMIGKHKNII 87 (307)
T ss_pred eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-----hH-------HHHHHHHHHHHHHHhcCCCCEe
Confidence 4567999999999999998631 34699999864311 01 134578899999999 799999
Q ss_pred cccccccC-cceeEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecC
Q psy520 243 RLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRD 308 (455)
Q Consensus 243 ~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~D 308 (455)
++++++.+ ...++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ +|++|||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~d 165 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS--KKCIHRD 165 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCccccc
Confidence 99998877 788999999999999999976432 1358899999999999999999999 8999999
Q ss_pred CCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCC
Q psy520 309 VKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPID 386 (455)
Q Consensus 309 ikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~ 386 (455)
|||+||+++.++.+||+|||+++........ .......++..|+|||.+. +.++.++|+|||||++|||++ |..||.
T Consensus 166 lkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 166 LAARNVLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred ccHHheEEcCCCcEEECCCcccccccccchh-hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999998765432111 1112223456899999664 457889999999999999998 899997
Q ss_pred CCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 387 DNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.............. .. ...+..++..+.+++.+|+..+|.+||++.+|++.|++++.
T Consensus 245 ~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 245 GVPVEELFKLLKEG-HR----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred cCCHHHHHHHHHcC-CC----------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 65532222221111 00 00112345568889999999999999999999999998764
No 151
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5e-39 Score=311.25 Aligned_cols=257 Identities=25% Similarity=0.390 Sum_probs=201.1
Q ss_pred CcCCCcccccCCEEEEEEEEcC-----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
|.+.+.||+|+||.||+|.+.+ +..||+|++..... ......+.+|+.++++++||||+++++
T Consensus 8 ~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~------------~~~~~~~~~e~~~l~~l~h~ni~~~~~ 75 (280)
T cd05043 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS------------EIQVTLLLQESCLLYGLSHQNILPILH 75 (280)
T ss_pred eEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC------------HHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3455899999999999999875 67899998853211 111455889999999999999999999
Q ss_pred cccC--cceeEEEEeccCCCHHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC
Q psy520 247 FCNN--IMNCIVYEYMCNGSLYDRLARVNNT-----PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 247 ~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
++.. ...+++++|+++++|.+++...... ..+++.+++.++.|++.||.|||+ .+++||||||+||+++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~i~H~di~p~nil~~~~ 153 (280)
T cd05043 76 VCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK--RGVIHKDIAARNCVIDEE 153 (280)
T ss_pred EEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccCHhhEEEcCC
Confidence 8755 6778999999999999999764322 568999999999999999999999 889999999999999999
Q ss_pred CceEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHH
Q psy520 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLV 397 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~ 397 (455)
+.+||+|||+++........ .......++..|+|||.+.+ .++.++|||||||++||+++ |..||...+........
T Consensus 154 ~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 232 (280)
T cd05043 154 LQVKITDNALSRDLFPMDYH-CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL 232 (280)
T ss_pred CcEEECCCCCcccccCCceE-EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 99999999999765433211 11123456778999997644 57889999999999999999 99999876543322221
Q ss_pred HhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
. ....+. ....++..+.+++.+|+..+|++||++.+|++.|+++..
T Consensus 233 ~-~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 233 K-DGYRLA----------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred H-cCCCCC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1 111100 011234557889999999999999999999999998764
No 152
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.7e-39 Score=304.82 Aligned_cols=245 Identities=27% Similarity=0.429 Sum_probs=193.6
Q ss_pred cccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 177 KLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
+||+|+||.||+|...+++.||+|.++.... .. ....|.+|++++++++||||+++++++.. ...++
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~------~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 69 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP------QE------LKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYI 69 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC------HH------HHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEE
Confidence 6999999999999987788999999864321 10 13358899999999999999999998877 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||+++++|.+++.... ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||++.....
T Consensus 70 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 145 (250)
T cd05085 70 VMELVPGGDFLSFLRKKK--DELKTKQLVKFALDAAAGMAYLES--KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDD 145 (250)
T ss_pred EEECCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccChheEEEcCCCeEEECCCccceeccc
Confidence 999999999999987543 358999999999999999999999 8999999999999999999999999999875432
Q ss_pred CCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchhhc
Q psy520 336 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAG 413 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 413 (455)
.... ......++..|+|||++. +.++.++||||||+++|++++ |..||............... ..
T Consensus 146 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-~~---------- 212 (250)
T cd05085 146 GIYS--SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-YR---------- 212 (250)
T ss_pred cccc--cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CC----------
Confidence 2111 111224466799999764 467889999999999999999 99999766533222221111 00
Q ss_pred CCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 414 EWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 414 ~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...+..++..+.+++.+|+..+|++||++.++++.|.
T Consensus 213 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 213 MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0011234556888999999999999999999999875
No 153
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=5.6e-39 Score=324.33 Aligned_cols=256 Identities=25% Similarity=0.344 Sum_probs=192.8
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.++||+|+||.||++.+. +|+.||||++..... . ......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 71 (372)
T cd07853 3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ------N-----LVSCKRVFRELKMLCFFKHDNVLSALDILQPP 71 (372)
T ss_pred cccceeeeCCCEEEEEEEECCCCCEEEEEecccccc------c-----hHHHHHHHHHHHHHHhCCCCCcCCHhheecCC
Confidence 45589999999999999975 589999999853211 0 0113458899999999999999999998765
Q ss_pred c-----ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEc
Q psy520 251 I-----MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 251 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
. ..++|+||+. ++|.+.+.. ...+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+
T Consensus 72 ~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~Nili~~~~~~kL~ 145 (372)
T cd07853 72 HIDPFEEIYVVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHS--AGILHRDIKPGNLLVNSNCVLKIC 145 (372)
T ss_pred CccccceEEEEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChHHEEECCCCCEEec
Confidence 3 5789999995 688888765 3469999999999999999999999 899999999999999999999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cc
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QE 401 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~ 401 (455)
|||+++........ ......+|+.|+|||.+.+ .++.++|||||||++|||++|+.||...+.......+.. +.
T Consensus 146 Dfg~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~ 223 (372)
T cd07853 146 DFGLARVEEPDESK--HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGT 223 (372)
T ss_pred cccceeecccCccc--cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCC
Confidence 99999865433211 1223468899999997755 368899999999999999999999987663322222111 11
Q ss_pred cchhh----------hcchhhcCC--------ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 402 VPVRE----------VLDKEAGEW--------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~----------~~d~~~~~~--------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... .+....... .....+..+.+||.+|+..||++||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 224 PSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred CCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 11110 000000000 01123456788999999999999999999975
No 154
>KOG0658|consensus
Probab=100.00 E-value=3.3e-40 Score=313.66 Aligned_cols=249 Identities=25% Similarity=0.367 Sum_probs=189.6
Q ss_pred CCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC---
Q psy520 175 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN--- 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--- 250 (455)
.+++|.|+||.||+|.... +..||||++-.+... -.+|+++|+.++|||||++.-++..
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----------------knrEl~im~~l~HpNIV~L~~~f~~~~~ 91 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----------------KNRELQIMRKLDHPNIVRLLYFFSSSTE 91 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----------------CcHHHHHHHhcCCcCeeeEEEEEEecCC
Confidence 3889999999999999864 789999998654331 2379999999999999999875532
Q ss_pred c---ceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC-CceEEc
Q psy520 251 I---MNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKLG 325 (455)
Q Consensus 251 ~---~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl~ 325 (455)
. ..+|||||| ..+|.+.++.... +..++...+.-+++|+.+||.|||+ .||+||||||.|+|+|.+ |.+|||
T Consensus 92 ~d~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~--~~IcHRDIKPqNlLvD~~tg~LKic 168 (364)
T KOG0658|consen 92 SDEVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS--HGICHRDIKPQNLLVDPDTGVLKIC 168 (364)
T ss_pred CchhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh--cCcccCCCChheEEEcCCCCeEEec
Confidence 2 335799999 5789888875321 3568888899999999999999999 899999999999999965 999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHH--hcc
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV--EQE 401 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~--~~~ 401 (455)
|||.|+....++.. ....-|+-|.|||.+.| .++.+.||||.|||+.||+-|++-|.+.+....-..+. .+.
T Consensus 169 DFGSAK~L~~~epn----iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~ 244 (364)
T KOG0658|consen 169 DFGSAKVLVKGEPN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGT 244 (364)
T ss_pred cCCcceeeccCCCc----eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCC
Confidence 99999988766532 23356888999997654 68999999999999999999999999876332222221 122
Q ss_pred cchhhh----------cchhh--cCC---ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 402 VPVREV----------LDKEA--GEW---NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~~----------~d~~~--~~~---~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.+++ -.+.. ..| .....+....+|+.+++..+|.+|.++.|++.
T Consensus 245 Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 245 PTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111111 00111 111 22345566788999999999999999998874
No 155
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5.7e-39 Score=315.05 Aligned_cols=255 Identities=28% Similarity=0.440 Sum_probs=198.0
Q ss_pred cCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLL 245 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 245 (455)
.+.+.||+|+||.||+|.+. .+..||||.++..... . ....+.+|+.+++++ +||||++++
T Consensus 38 ~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~-------~~~~~~~E~~~l~~l~~h~~iv~~~ 105 (302)
T cd05055 38 SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS-----S-------EREALMSELKIMSHLGNHENIVNLL 105 (302)
T ss_pred EEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh-----H-------HHHHHHHHHHHHHhccCCCCcceEE
Confidence 44589999999999999752 2457999998643210 1 134588999999999 799999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEE
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
+++.. +..++||||+++|+|.+++.... ...+++.++..++.+++.||.|||+ ++++|+||||+|||++.++.+||
T Consensus 106 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~l 182 (302)
T cd05055 106 GACTIGGPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNVLLTHGKIVKI 182 (302)
T ss_pred EEEecCCceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeehhhhccceEEEcCCCeEEE
Confidence 98876 78899999999999999997633 2348999999999999999999999 88999999999999999999999
Q ss_pred ccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhccc
Q psy520 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+|||+++....... ........++..|+|||.+ .+.++.++|||||||++|||++ |..||.................
T Consensus 183 ~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~ 261 (302)
T cd05055 183 CDFGLARDIMNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY 261 (302)
T ss_pred CCCcccccccCCCc-eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC
Confidence 99999876543321 1112234567889999966 4567889999999999999998 9999976553221111111110
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
. ...+...+..+.+++.+||..+|++||++.+|++.|++++
T Consensus 262 ~----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~ 302 (302)
T cd05055 262 R----------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL 302 (302)
T ss_pred c----------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence 0 0011123456888999999999999999999999999864
No 156
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.1e-39 Score=314.79 Aligned_cols=256 Identities=28% Similarity=0.419 Sum_probs=198.4
Q ss_pred cCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLL 245 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 245 (455)
++.+.||+|+||.||++.+.. ...||+|.++.... .. ....+.+|+.++.++ +|+||++++
T Consensus 15 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~------~~------~~~~~~~E~~~l~~l~~h~~i~~~~ 82 (293)
T cd05053 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT------EK------DLSDLVSEMEMMKMIGKHKNIINLL 82 (293)
T ss_pred EEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC------HH------HHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 345899999999999998752 36799999864321 00 134588999999999 899999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCC
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVN-------------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKS 311 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp 311 (455)
+++.. +..+++|||+++|+|.+++.... ....+++..++.++.|++.||.|||+ ++|+||||||
T Consensus 83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivH~dlkp 160 (293)
T cd05053 83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS--KKCIHRDLAA 160 (293)
T ss_pred EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--CCccccccce
Confidence 98777 78899999999999999997531 23568999999999999999999999 8999999999
Q ss_pred CcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCc
Q psy520 312 ANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNN 389 (455)
Q Consensus 312 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~ 389 (455)
+||+++.++.+||+|||+++......... ......++..|+|||.+. ..++.++|||||||++|||++ |..||....
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 239 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYYR-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 239 (293)
T ss_pred eeEEEcCCCeEEeCcccccccccccccee-ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence 99999999999999999998654432111 112234567899999654 467889999999999999998 999997655
Q ss_pred hhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 390 TILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
............ .. ..+..++..+.+|+.+|+..+|++|||+.++++.|++++.
T Consensus 240 ~~~~~~~~~~~~-~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~~ 293 (293)
T cd05053 240 VEELFKLLKEGY-RM----------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRMLT 293 (293)
T ss_pred HHHHHHHHHcCC-cC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhhC
Confidence 332222211110 00 0112234557889999999999999999999999998863
No 157
>KOG0196|consensus
Probab=100.00 E-value=5.4e-41 Score=342.50 Aligned_cols=279 Identities=25% Similarity=0.369 Sum_probs=230.5
Q ss_pred cceeeeHHHHHHhhcCCCCCCC---CcCCCcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhh
Q psy520 150 ELIAFTFCDLERATDGFNRKPY---PRRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIP 222 (455)
Q Consensus 150 ~~~~~~~~~l~~~t~~f~~~~~---~~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~ 222 (455)
-+.-++|+|-.++...|...-. -.+.++||.|.||.||+|+++- ...||||.++..... ..
T Consensus 606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyte------------kq 673 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTE------------KQ 673 (996)
T ss_pred ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccH------------HH
Confidence 3567888888888888876522 2678999999999999999873 357999999865431 12
Q ss_pred HHHHHHHHHHHHcCCCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Q psy520 223 ILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLS 301 (455)
Q Consensus 223 ~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~ 301 (455)
...|+.|..||.++.||||++|.|.... ....||.|||+||+|..+|+...+ .+++.|...++++|+.|++||-+
T Consensus 674 rrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsd-- 749 (996)
T KOG0196|consen 674 RRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSD-- 749 (996)
T ss_pred HhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhh--
Confidence 4559999999999999999999998877 666789999999999999998764 59999999999999999999999
Q ss_pred CCeEecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc
Q psy520 302 KPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT 380 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt 380 (455)
.+.|||||-..|||++.+..+|++|||++|+...+......+..-.=...|.|||++ .++++.+|||||||||+||.++
T Consensus 750 m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmS 829 (996)
T KOG0196|consen 750 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 829 (996)
T ss_pred cCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecc
Confidence 789999999999999999999999999999876654221111222224579999966 5689999999999999999998
Q ss_pred -CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhcC
Q psy520 381 -GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 381 -G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
|..||.+.........++ ...+-.++.+++..+.+|+..||++|.++||.+.+++..|.+++.|
T Consensus 830 yGERPYWdmSNQdVIkaIe-----------~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 830 YGERPYWDMSNQDVIKAIE-----------QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred cCCCcccccchHHHHHHHH-----------hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 999999887544433333 2233446677888899999999999999999999999999999875
No 158
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.2e-39 Score=306.51 Aligned_cols=245 Identities=29% Similarity=0.439 Sum_probs=194.6
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc-C
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN-N 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~ 250 (455)
|.+.+.||+|+||.||+|... |..||+|.++.... ...|.+|+.++++++|+|++++++++. +
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~---------------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (256)
T cd05082 8 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT---------------AQAFLAEASVMTQLRHSNLVQLLGVIVEE 71 (256)
T ss_pred CeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCch---------------HHHHHHHHHHHHhCCCCCeeeEEEEEEcC
Confidence 455689999999999999886 78999999853211 345889999999999999999998653 3
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++.... ...+++..+..++.+++.||+|||+ +|++||||||+||++++++.+||+|||+
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~dfg~ 148 (256)
T cd05082 72 KGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEA--NNFVHRDLAARNVLVSEDNVAKVSDFGL 148 (256)
T ss_pred CCceEEEEECCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEeccccchheEEEcCCCcEEecCCcc
Confidence 67899999999999999987643 3458999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++...... ....++..|+|||++.+ .++.++|||||||++|||++ |..||............... ..
T Consensus 149 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~---- 217 (256)
T cd05082 149 TKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YK---- 217 (256)
T ss_pred ceeccccC------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CC----
Confidence 87543221 12344567999997644 57889999999999999998 99999765432222111111 00
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
......++..+.+++.+||..+|++||++.++++.|+++
T Consensus 218 ------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 ------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 011123455688899999999999999999999999864
No 159
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.8e-39 Score=318.13 Aligned_cols=237 Identities=24% Similarity=0.330 Sum_probs=185.4
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|..+. ++.||+|+++...... ......+.+|+.++.++ +||||+.+++++.+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 70 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD----------DEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSR 70 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCE
Confidence 369999999999999864 7899999997543211 11144578899999888 69999999998776 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 71 LFLVIEYVNGGDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHE--RGIIYRDLKLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEeCCCCEEEecccccee
Confidence 89999999999999988763 469999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCch-------hhHHHHHHhcccch
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNT-------ILYYYLVVEQEVPV 404 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~-------~~~~~~~~~~~~~~ 404 (455)
..... .......||+.|+|||++. ..++.++|||||||++|||++|..||..... .............+
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (327)
T cd05617 146 GLGPG---DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI 222 (327)
T ss_pred ccCCC---CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC
Confidence 32211 1123467999999999764 4678899999999999999999999964321 01111111111111
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
+..++..+.++|.+||..||.+|+++
T Consensus 223 ------------p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 ------------PRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred ------------CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 12234457889999999999999985
No 160
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.6e-39 Score=315.03 Aligned_cols=256 Identities=26% Similarity=0.402 Sum_probs=198.3
Q ss_pred cCCCcccccCCEEEEEEEEc--------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceec
Q psy520 173 RRGNKLGEGQFGTVYYGKLK--------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.+++.||+|+||.||+|++. ++..||+|.+...... . ....+.+|+.+++.+ +||||++
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~-----~-------~~~~~~~E~~~l~~l~~h~~i~~ 85 (304)
T cd05101 18 TLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATE-----K-------DLSDLVSEMEMMKMIGKHKNIIN 85 (304)
T ss_pred eecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccch-----H-------HHHHHHHHHHHHHhhccCCCchh
Confidence 45589999999999999742 2457999998632110 0 134588999999999 8999999
Q ss_pred ccccccC-cceeEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCC
Q psy520 244 LLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 309 (455)
Q Consensus 244 l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Di 309 (455)
+++++.. ...++||||+++|+|.+++..... ...+++.++..++.|++.||.|||+ +|++||||
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~--~givH~dl 163 (304)
T cd05101 86 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS--QKCIHRDL 163 (304)
T ss_pred eeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH--CCeeeccc
Confidence 9998877 778999999999999999976421 2357889999999999999999999 89999999
Q ss_pred CCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q psy520 310 KSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDD 387 (455)
Q Consensus 310 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~ 387 (455)
||+||+++.++.+||+|||+++....... ........++..|+|||++. +.++.++||||||+++|||++ |..||..
T Consensus 164 kp~Nili~~~~~~kl~D~g~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 242 (304)
T cd05101 164 AARNVLVTENNVMKIADFGLARDVNNIDY-YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 242 (304)
T ss_pred ccceEEEcCCCcEEECCCccceecccccc-cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 99999999999999999999886543321 11122345677899999764 457889999999999999998 8889876
Q ss_pred CchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 388 NNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
............. .. ...+..++..+.+++.+|+..+|.+||++.+|++.|++++.
T Consensus 243 ~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 243 IPVEELFKLLKEG-HR----------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred CCHHHHHHHHHcC-Cc----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 6533222222111 00 00112345668889999999999999999999999998763
No 161
>KOG1989|consensus
Probab=100.00 E-value=2.2e-39 Score=337.74 Aligned_cols=254 Identities=24% Similarity=0.308 Sum_probs=202.1
Q ss_pred cCCCcccccCCEEEEEEEEcCC-cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceecccccc-c
Q psy520 173 RRGNKLGEGQFGTVYYGKLKNG-MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFC-N 249 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~-~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~-~ 249 (455)
++.+.|.+|||+.||++.+..+ ..||+|++-.... ...+...+||++|+.|+ |+|||.+++.+ .
T Consensus 40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de-------------~~L~~v~~EI~~MK~L~gh~nIV~yidss~~ 106 (738)
T KOG1989|consen 40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDE-------------EALNAVKREIDIMKLLSGHKNIVSYIDSSAI 106 (738)
T ss_pred EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCH-------------HHHHHHHHHHHHHHHhcCCCceeeEeccccc
Confidence 4568999999999999998765 9999999864311 12566889999999997 99999999922 1
Q ss_pred ---C----cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 250 ---N----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ---~----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. -+.+|+||||.||+|.|++...... .|++.++++|+.++++|+++||....+|||||||-+||||+.+|..
T Consensus 107 ~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~ 185 (738)
T KOG1989|consen 107 NRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNY 185 (738)
T ss_pred cccCCCceeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCE
Confidence 1 2446899999999999999865543 4999999999999999999999987789999999999999999999
Q ss_pred EEccccccccccCCCccc----ceec--cCCCCCCcCCcccc---cC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhh
Q psy520 323 KLGDFGIVKMSETSNMKT----MYTE--NLTGTRPYMPPEAM---HC-QISTKTDVFSYGVILLELLTGMKPIDDNNTIL 392 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~----~~~~--~~~gt~~Y~aPE~~---~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~ 392 (455)
||||||.|.-........ .... ...-|+.|+|||.+ .| .+++|+|||+|||+||-|+....||++.....
T Consensus 186 KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la 265 (738)
T KOG1989|consen 186 KLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA 265 (738)
T ss_pred EeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee
Confidence 999999876432221100 0000 12458999999965 33 57999999999999999999999999764321
Q ss_pred HHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 393 YYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 393 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+++.+....+.+.++..+.+||..||..||.+||++.+|+..+-++.+
T Consensus 266 --------------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 266 --------------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred --------------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 222222222335788889999999999999999999999999987753
No 162
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-38 Score=310.15 Aligned_cols=256 Identities=24% Similarity=0.429 Sum_probs=196.6
Q ss_pred CcCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
|++.++||+|+||.||+|..++ +..||+|.++.... .. ....+.+|+.++++++||||++++
T Consensus 8 ~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~------~~~~~~~e~~~l~~l~~~~i~~~~ 75 (288)
T cd05061 8 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS------LR------ERIEFLNEASVMKGFTCHHVVRLL 75 (288)
T ss_pred ceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC------HH------HHHHHHHHHHHHHhCCCCCeeeEE
Confidence 4556999999999999997542 45799998753221 00 123478899999999999999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVNN-------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD 317 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~ 317 (455)
+++.+ ...++||||+++|+|.+++..... .+.+++..+..++.|++.||.|||+ ++++||||||+||+++
T Consensus 76 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dikp~nili~ 153 (288)
T cd05061 76 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVA 153 (288)
T ss_pred EEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcCCCCChheEEEc
Confidence 98766 778999999999999999976432 2456778899999999999999999 8999999999999999
Q ss_pred CCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHH
Q psy520 318 ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYY 395 (455)
Q Consensus 318 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~ 395 (455)
.++.+||+|||+++......... ......++..|+|||.+. +.++.++|+|||||++|||++ |..||..........
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~ 232 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 232 (288)
T ss_pred CCCcEEECcCCcccccccccccc-ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999987654322111 112234567899999664 567899999999999999999 788997655322221
Q ss_pred HHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
........ . .+...+..+.+++.+|+..+|++||++.++++.|++.+
T Consensus 233 ~~~~~~~~----------~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 233 FVMDGGYL----------D-QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHcCCCC----------C-CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 11111000 0 01123456889999999999999999999999998765
No 163
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1e-38 Score=306.38 Aligned_cols=255 Identities=26% Similarity=0.403 Sum_probs=199.3
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
|++++.||+|+||.||+|...+++.+|||.++........ .......+.+|++++++++|+||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLA-------AEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD 74 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhh-------HHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence 4667999999999999999877899999998754321110 11124568899999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|+||+++++|.+++.+. .++++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.+||+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 149 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHN--NCVVHRDIKGNNVMLMPNGIIKLIDFGCA 149 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHhEEECCCCeEEeccchhh
Confidence 7889999999999999999763 458999999999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCc---ccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 331 KMSETSNM---KTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 331 ~~~~~~~~---~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
........ .........|+..|+|||.+.+ ..+.++|+||||+++|+|++|..||...+.......+.........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 229 (265)
T cd06631 150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR 229 (265)
T ss_pred HhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC
Confidence 76532111 1112234578999999997754 5688999999999999999999999865533222222111111110
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+..++..+.++|.+||..+|.+||++.++++
T Consensus 230 ---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 230 ---------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ---------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11234556788999999999999999999875
No 164
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.8e-39 Score=315.45 Aligned_cols=196 Identities=25% Similarity=0.365 Sum_probs=158.3
Q ss_pred CCcccccCCEEEEEEEEcC---CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 175 GNKLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.+||+|+||+||+|+.++ +..||+|.+..... ...+.+|+.++++++||||+++++++..
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---------------~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 70 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---------------SMSACREIALLRELKHPNVIALQKVFLSH 70 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---------------cHHHHHHHHHHHhCCCCCeeeEEEEEecc
Confidence 4789999999999999753 57899999864321 1237789999999999999999997632
Q ss_pred --cceeEEEEeccCCCHHHHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEE----CC
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVN------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL----DE 318 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl----~~ 318 (455)
...++||||+. ++|.+++.... ....+++..+..++.|++.||.|||+ ++++||||||+|||+ +.
T Consensus 71 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--~~ivH~Dlkp~Nil~~~~~~~ 147 (317)
T cd07867 71 SDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred CCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh--CCEEcCCCCHHHEEEccCCCC
Confidence 56789999985 68888775321 12358899999999999999999999 899999999999999 56
Q ss_pred CCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q psy520 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDN 388 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~ 388 (455)
++.+||+|||+++................||+.|+|||.+.+ .++.++|||||||++|||+||.+||...
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 148 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 789999999999876543222222334678999999997754 3688999999999999999999999754
No 165
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.3e-39 Score=325.06 Aligned_cols=251 Identities=22% Similarity=0.271 Sum_probs=193.8
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.++. ++.||+|++....... ......+.+|+.+++.++||||+++++.+.+
T Consensus 45 y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~----------~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 45 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK----------RSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh----------hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3455999999999999999874 7899999986432110 0113447889999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 788999999999999999865 248899999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccch
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
++....... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+......+
T Consensus 189 a~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 266 (371)
T cd05622 189 CMKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL 266 (371)
T ss_pred eeEcCcCCc--ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc
Confidence 886543221 11235679999999997743 26789999999999999999999998766443333332211111
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCC--CCCHHHHHHH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDK--RASMRDIVDL 448 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~--RPs~~evl~~ 448 (455)
. ......++..+.++|.+|+..++.+ ||+++++++.
T Consensus 267 ~--------~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 267 T--------FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred c--------CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 0 0111245666888999999744433 7899988763
No 166
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-38 Score=304.44 Aligned_cols=250 Identities=26% Similarity=0.375 Sum_probs=197.7
Q ss_pred CcccccCCEEEEEEEEcC--C--cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCc
Q psy520 176 NKLGEGQFGTVYYGKLKN--G--MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~--~--~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
++||+|+||.||+|.+.+ + ..||||.+...... .....|.+|++++++++||||+++++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 68 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------------DIMDDFLKEAAIMHSLDHENLIRLYGVVLTH 68 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------------HHHHHHHHHHHHHhhcCCCCccceeEEEcCC
Confidence 368999999999999753 2 36899998654321 1245688999999999999999999987777
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++..... ..+++..++.++.|++.||+|||+ ++++|+||||+||+++.++.+||+|||+++
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~di~p~nil~~~~~~~kl~dfg~~~ 145 (257)
T cd05040 69 PLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES--KRFIHRDLAARNILLASDDKVKIGDFGLMR 145 (257)
T ss_pred eEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh--CCccccccCcccEEEecCCEEEeccccccc
Confidence 88999999999999999987442 468999999999999999999999 899999999999999999999999999988
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
................++..|+|||.+. ..++.++|||||||++|||++ |..||...+...............
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----- 220 (257)
T cd05040 146 ALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL----- 220 (257)
T ss_pred cccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC-----
Confidence 7654321111122356778899999765 467889999999999999999 999997665433222222111000
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..+...+..+.+++.+|+..+|++||++.+|++.|.
T Consensus 221 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 -----ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -----CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011234456888999999999999999999999885
No 167
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.6e-38 Score=306.14 Aligned_cols=253 Identities=26% Similarity=0.384 Sum_probs=199.6
Q ss_pred cCCCcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+.++||+|+||.||+|.+.+ ...||||....... . ...+.|.+|+.++++++||||+++++++
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~------~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 76 (270)
T cd05056 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS------P------SVREKFLQEAYIMRQFDHPHIVKLIGVI 76 (270)
T ss_pred eeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC------H------HHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence 445899999999999998753 24689998864321 0 0134588999999999999999999998
Q ss_pred cCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 249 NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 249 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
.+...++||||+++|+|.+++.... ..+++.+++.++.+++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~~H~dl~p~nili~~~~~~~l~d~g 152 (270)
T cd05056 77 TENPVWIVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLES--KRFVHRDIAARNVLVSSPDCVKLGDFG 152 (270)
T ss_pred cCCCcEEEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccChheEEEecCCCeEEccCc
Confidence 8888899999999999999997632 358999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+++....... .......++..|+|||.+. ..++.++||||||+++||+++ |..||................ ..
T Consensus 153 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~-- 227 (270)
T cd05056 153 LSRYLEDESY--YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-RL-- 227 (270)
T ss_pred eeeecccccc--eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-cC--
Confidence 9876544321 1112234456899999664 457889999999999999996 999998765332222211111 00
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+..++..+.+++.+|+..+|.+||++.++++.|+++.+
T Consensus 228 --------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 228 --------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0112345568889999999999999999999999998875
No 168
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5e-39 Score=306.85 Aligned_cols=251 Identities=32% Similarity=0.465 Sum_probs=195.2
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||++.... ++.||+|.+..... .. .......+|+.++++++||||+++++++.+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~------~~-----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~ 69 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI------EE-----EEREENIREIKILRRLRHPNIVQILDVFQD 69 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH------HH-----HHHHHHHHHHHHHHHHTBTTBCHEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc------cc-----cccchhhhhhhccccccccccccccccccc
Confidence 4567899999999999999875 67899999975432 11 112223459999999999999999998876
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+.+++|.+++.. ...+++..++.++.|++.||.+||+ .+++|+||||+||+++.++.++|+|||.
T Consensus 70 ~~~~~~v~~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~--~~i~H~dikp~NIl~~~~~~~~l~Dfg~ 144 (260)
T PF00069_consen 70 DNYLYIVMEYCPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHS--KGIVHRDIKPENILLDENGEVKLIDFGS 144 (260)
T ss_dssp SSEEEEEEEEETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHH--TTEEESSBSGGGEEESTTSEEEESSGTT
T ss_pred cccccccccccccccccccccc---ccccccccccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence 788999999999999999984 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc--CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccchhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~ 406 (455)
+...... ........+|..|+|||++. ...+.++|+||+|+++|+|++|..||.............. .......
T Consensus 145 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T PF00069_consen 145 SVKLSEN---NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS 221 (260)
T ss_dssp TEESTST---TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH
T ss_pred ccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence 8754111 12234567899999999775 4678899999999999999999999998732221111111 1001100
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. .........+.++|.+||..||++||++.++++
T Consensus 222 ~~------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 222 SS------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HT------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cc------cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 001111256888999999999999999999875
No 169
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.6e-39 Score=310.61 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=197.4
Q ss_pred CcCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
|.+.+.||+|+||.||+|.+++ +..||+|.+..... . .....+.+|+.+++.++||||++++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~------~~~~~~~~e~~~l~~~~~~~i~~~~ 75 (277)
T cd05032 8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS------M------RERIEFLNEASVMKEFNCHHVVRLL 75 (277)
T ss_pred eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC------H------HHHHHHHHHHHHHHhCCCCceeEEE
Confidence 3455899999999999998753 36899999853221 0 0134588999999999999999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVNN-------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD 317 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~ 317 (455)
+++.+ ...++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+ .+++||||||+||+++
T Consensus 76 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~di~p~nill~ 153 (277)
T cd05032 76 GVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA--KKFVHRDLAARNCMVA 153 (277)
T ss_pred EEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCccccccChheEEEc
Confidence 98777 788999999999999999975432 2347889999999999999999999 8999999999999999
Q ss_pred CCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHH
Q psy520 318 ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYY 395 (455)
Q Consensus 318 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~ 395 (455)
.++.+||+|||+++........ .......++..|+|||.+ .+..+.++|||||||++||++| |..||..........
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 232 (277)
T cd05032 154 EDLTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK 232 (277)
T ss_pred CCCCEEECCcccchhhccCccc-ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH
Confidence 9999999999998765433211 112234567889999966 4567889999999999999998 999997655332222
Q ss_pred HHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
...... . . ..+..++..+.+++.+||..+|++||++.++++.|++
T Consensus 233 ~~~~~~-~-~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 233 FVIDGG-H-L---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHhcCC-C-C---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 211110 0 0 0112235568899999999999999999999998863
No 170
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=9.2e-39 Score=306.17 Aligned_cols=252 Identities=23% Similarity=0.383 Sum_probs=200.3
Q ss_pred CCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.|++.++||+|+||.||+|.+.++..+|+|.++.... ....|.+|++++++++|+||+++++++.+
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 72 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--------------SVEAFLAEANVMKTLQHDKLVKLHAVVTK 72 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCChh--------------HHHHHHHHHHHHHhcCCCCcceEEEEEcC
Confidence 4567799999999999999987778899998863211 13458899999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...+++|||+++++|.+++.... ...+++.++..++.+++.||.|||+ .|++|+||||+||+++.++.+||+|||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 73 EPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred CCeEEEEEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEEcCCCcEEECCCcce
Confidence 77899999999999999997643 3468899999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
........ .......++..|+|||.+. +.++.++|+|||||++|+++| |..||...+........... ...
T Consensus 150 ~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~---- 222 (260)
T cd05073 150 RVIEDNEY--TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRM---- 222 (260)
T ss_pred eeccCCCc--ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CCC----
Confidence 76543221 1122345667899999764 457889999999999999999 99999876533222221111 000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
......+..+.+++.+|+..+|++||++.++.+.|+++
T Consensus 223 ------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 223 ------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred ------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 01123445588899999999999999999999999763
No 171
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7.4e-39 Score=309.86 Aligned_cols=253 Identities=26% Similarity=0.386 Sum_probs=193.9
Q ss_pred cCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
.+.+.||+|+||.||+|.+.+ +..||+|.+..... .. ....|.+|+.++++++|+||+++++
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~------~~------~~~~~~~e~~~l~~l~~~~i~~~~~ 76 (277)
T cd05036 9 TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS------EQ------DESDFLMEALIMSKFNHQNIVRLIG 76 (277)
T ss_pred EeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC------HH------HHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 344899999999999998853 46789998753221 10 1345889999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC-
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNN----TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF- 320 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~- 320 (455)
++.+ ...++||||+++++|.+++..... ...+++.++..++.|++.||+|||+ ++++||||||+||+++.++
T Consensus 77 ~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 77 VSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE--NHFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred EEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccchheEEEeccCC
Confidence 7766 778999999999999999976532 2358999999999999999999999 8899999999999998755
Q ss_pred --ceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHH
Q psy520 321 --VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 321 --~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
.+||+|||+++........ .......++..|+|||++ .+.++.++|||||||++|||++ |..||...........
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~ 233 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYY-RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF 233 (277)
T ss_pred CcceEeccCccccccCCccce-ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 6999999998865322211 111223345679999966 4568999999999999999997 9999987653322222
Q ss_pred HHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..... .. . .+..++..+.+++.+|+..+|++||++.+|++.|++
T Consensus 234 ~~~~~-~~---------~-~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 234 VTGGG-RL---------D-PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHcCC-cC---------C-CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 11110 00 0 112334568889999999999999999999998863
No 172
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.5e-39 Score=312.83 Aligned_cols=254 Identities=28% Similarity=0.402 Sum_probs=194.9
Q ss_pred CcCCCcccccCCEEEEEEEEcC-Cc--EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||+|.+++ +. .+++|.++.... . .....|.+|++++.++ +||||++++++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~------~------~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 71 (297)
T cd05089 4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS------E------NDHRDFAGELEVLCKLGHHPNIINLLGA 71 (297)
T ss_pred ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC------H------HHHHHHHHHHHHHHhhcCCCchhheEEE
Confidence 4556899999999999998764 33 478888753211 0 0134588999999999 79999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 313 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~N 313 (455)
+.+ ...++|+||+++++|.+++..... ...+++.++..++.|++.||.|||+ +|++||||||+|
T Consensus 72 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~--~~ivH~dlkp~N 149 (297)
T cd05089 72 CENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE--KQFIHRDLAARN 149 (297)
T ss_pred EccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCcCCcce
Confidence 877 778999999999999999975321 1358899999999999999999999 899999999999
Q ss_pred EEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchh
Q psy520 314 VLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTI 391 (455)
Q Consensus 314 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~ 391 (455)
||++.++.+||+|||++....... .......+..|+|||.+. +.++.++|||||||++|||++ |..||......
T Consensus 150 ill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~ 225 (297)
T cd05089 150 VLVGENLASKIADFGLSRGEEVYV----KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA 225 (297)
T ss_pred EEECCCCeEEECCcCCCcccccee----ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999999986422110 111122345799999764 457899999999999999998 99999876543
Q ss_pred hHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 392 LYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 392 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
......... . ....+..++..+.+|+.+|+..+|.+||+++++++.|++++.
T Consensus 226 ~~~~~~~~~-~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 226 ELYEKLPQG-Y----------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred HHHHHHhcC-C----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 222211110 0 000112344568899999999999999999999999988764
No 173
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.7e-39 Score=321.34 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=190.3
Q ss_pred CCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|++.+.||+|+||.||++.+.. |..||||++....... .....+.+|+.+++.++||||+++++++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~~~~~~ 89 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-----------THAKRAYRELVLLKCVNHKNIISLLNVF 89 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccch-----------hHHHHHHHHHHHHHhCCCCCEeeeeeee
Confidence 445666999999999999999864 8899999986432110 0134577999999999999999999976
Q ss_pred cC-------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 249 NN-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 249 ~~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
.. ...|+||||+. ++|.+.+.. .+++..+..++.|++.||.|||+ +||+||||||+|||++.++.
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~--~~ivHrDlkp~NIl~~~~~~ 161 (359)
T cd07876 90 TPQKSLEEFQDVYLVMELMD-ANLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCT 161 (359)
T ss_pred ccCCCccccceeEEEEeCCC-cCHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCC
Confidence 43 24689999995 567666643 47889999999999999999999 89999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE- 399 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~- 399 (455)
+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..........
T Consensus 162 ~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~ 237 (359)
T cd07876 162 LKILDFGLARTACTNF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 237 (359)
T ss_pred EEEecCCCccccccCc----cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999987543221 1234578999999997754 578899999999999999999999987653222111111
Q ss_pred cccchhh-----------hcchhh-----------cCC-------ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 400 QEVPVRE-----------VLDKEA-----------GEW-------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 ~~~~~~~-----------~~d~~~-----------~~~-------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+... +..... ..| .....+..+.+||.+|+..||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 238 LGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred cCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000 000000 000 00112456789999999999999999999986
No 174
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.5e-38 Score=306.38 Aligned_cols=255 Identities=25% Similarity=0.394 Sum_probs=199.6
Q ss_pred CcCCCcccccCCEEEEEEEEcC-Cc----EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
|++.+.||+|+||.||+|.+++ |. .||+|.+..... . .....+.+|+.++++++||||+++++
T Consensus 9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~ 76 (279)
T cd05057 9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS------P------KANKEILDEAYVMASVDHPHVVRLLG 76 (279)
T ss_pred cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC------H------HHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 3556899999999999998753 32 589998764322 0 11355889999999999999999999
Q ss_pred cccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 247 FCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 247 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
++.....++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|
T Consensus 77 ~~~~~~~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~--~~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 77 ICLSSQVQLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEE--KRLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred EEecCceEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh--CCEEecccCcceEEEcCCCeEEECC
Confidence 988888899999999999999997643 358999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccch
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||+++....... ........++..|+|||.+. +.++.++|+||||+++||+++ |..||................ .
T Consensus 153 fg~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~- 229 (279)
T cd05057 153 FGLAKLLDVDEK-EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-R- 229 (279)
T ss_pred CcccccccCccc-ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-C-
Confidence 999986653321 11112233456899999664 567889999999999999999 999998765332222221110 0
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
...+...+..+.+++.+||..+|+.||++.++++.|+++.+
T Consensus 230 ---------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 230 ---------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 01111223347788999999999999999999999998764
No 175
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.3e-39 Score=318.05 Aligned_cols=253 Identities=23% Similarity=0.281 Sum_probs=192.4
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||++..+. ++.||||++.+..... ......|.+|+.++..++|+||+++++++.+
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 72 (331)
T cd05597 3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK----------RAETACFREERDVLVNGDRRWITNLHYAFQD 72 (331)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----------hhhHHHHHHHHHHHHhCCCCCCCceEEEEec
Confidence 5667999999999999999864 8899999996432110 1114558889999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 148 (331)
T cd05597 73 ENNLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQ--LGYVHRDIKPDNVLLDKNGHIRLADFGS 148 (331)
T ss_pred CCeEEEEEecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeEECCCCHHHEEECCCCCEEEEECCc
Confidence 78899999999999999997643 368999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+........ .......||+.|+|||++. +.++.++|||||||++|||++|..||...........+......
T Consensus 149 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~ 226 (331)
T cd05597 149 CLRLLADGT--VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEH 226 (331)
T ss_pred eeecCCCCC--ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCc
Confidence 876543221 1122346999999999774 24678999999999999999999999876543322222211110
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCc--CCCCCHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEK--DKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp--~~RPs~~evl~ 447 (455)
.. +.. ....++..++++|.+|+..++ ..||++.++++
T Consensus 227 ~~--~~~-----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 227 FQ--FPP-----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cc--CCC-----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 00 000 011245567788888776543 34889988875
No 176
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.9e-39 Score=346.86 Aligned_cols=262 Identities=21% Similarity=0.253 Sum_probs=199.1
Q ss_pred CCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.++||+|+||.||+|.+.. |+.||||+++...... ......|.+|++++++++||||+++++++.
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~----------e~~~~rflrEi~ILs~L~HPNIVkl~~v~~ 72 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN----------PLLKKRFLREAKIAADLIHPGIVPVYSICS 72 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccC----------HHHHHHHHHHHHHHHhCCCcCcCeEEEEEe
Confidence 45677999999999999999864 8999999996432210 111456899999999999999999999887
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNN--------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+ +..++||||++||+|.+++..... ...+++..++.++.|++.||+|||+ +||+||||||+|||++.++
T Consensus 73 d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs--~GIIHRDLKPeNILLd~dg 150 (932)
T PRK13184 73 DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS--KGVLHRDLKPDNILLGLFG 150 (932)
T ss_pred eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH--CCccccCCchheEEEcCCC
Confidence 7 788999999999999999875321 2345677889999999999999999 8999999999999999999
Q ss_pred ceEEccccccccccCCCcc---------------cceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCC
Q psy520 321 VPKLGDFGIVKMSETSNMK---------------TMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKP 384 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~---------------~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p 384 (455)
.+||+|||+++........ ........||+.|+|||.+.+ ..+.++|||||||++|||+||..|
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P 230 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 9999999999865211100 011123579999999997654 578899999999999999999999
Q ss_pred CCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC-CHHHHHHHHHhhh
Q psy520 385 IDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA-SMRDIVDLLSKSV 453 (455)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-s~~evl~~L~~~~ 453 (455)
|.............. .++. ...+...++..+.+++.+|+..||++|| +++++.+.|+..+
T Consensus 231 F~~~~~~ki~~~~~i--------~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 231 YRRKKGRKISYRDVI--------LSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred CCCcchhhhhhhhhc--------cChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 976442211111000 0000 0011123455688899999999999995 6677777777654
No 177
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.4e-38 Score=308.52 Aligned_cols=258 Identities=22% Similarity=0.328 Sum_probs=194.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|+.+ ++..||||+++....... ....+.+|+.++++++||||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 70 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG-----------VPSTAIREISLLKELQHPNIVCLQDVLMQ 70 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCC-----------chHHHHHHHHHHHhcCCCCEeeeEEEEee
Confidence 345689999999999999986 488999999864322110 12347789999999999999999998876
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||++ ++|.+++........+++.++..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+
T Consensus 71 ~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~ 147 (285)
T cd07861 71 ESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS--RRVLHRDLKPQNLLIDNKGVIKLADFGL 147 (285)
T ss_pred CCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEEcCCCcEEECcccc
Confidence 78899999996 6899988765544679999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--ccc---
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEV--- 402 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~--- 402 (455)
+....... .......+++.|+|||.+.+ .++.++|+|||||++|+|+||.+||.............. ...
T Consensus 148 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd07861 148 ARAFGIPV---RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTED 224 (285)
T ss_pred eeecCCCc---ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 87553321 11223467889999997754 368899999999999999999999987653222111111 000
Q ss_pred ------chhhhcchhhcCCC-------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 ------PVREVLDKEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ------~~~~~~d~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+ ......+. ...++..+.++|.+||..||.+||++.+|++
T Consensus 225 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 225 VWPGVTSLPDY-KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhcchhhHHH-HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000 00000000 1124556778999999999999999999875
No 178
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.4e-38 Score=310.46 Aligned_cols=260 Identities=27% Similarity=0.351 Sum_probs=198.7
Q ss_pred CCcCCCcccccCCEEEEEEEEcC-----------------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHH
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN-----------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTL 233 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 233 (455)
.|++.++||+|+||.||+|.+.. +..||+|.+...... .....|.+|++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~------------~~~~~~~~e~~~l 73 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD------------NAREDFLKEVKIL 73 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH------------HHHHHHHHHHHHH
Confidence 35677999999999999998652 245899998643221 1145688999999
Q ss_pred HcCCCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCe
Q psy520 234 SQCKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN--------TPPLDSNKRYSIALGVAEALHYLHSLSKPI 304 (455)
Q Consensus 234 ~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~i 304 (455)
++++||||+++++++.. +..+++|||+++++|.+++..... ...+++..++.++.|++.||.|||+ +++
T Consensus 74 ~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~--~~i 151 (296)
T cd05051 74 SRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES--LNF 151 (296)
T ss_pred HhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH--cCc
Confidence 99999999999998877 788999999999999999976431 1268999999999999999999999 899
Q ss_pred EecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc--C
Q psy520 305 IHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT--G 381 (455)
Q Consensus 305 iH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt--G 381 (455)
+||||||+||+++.++.++|+|||+++....... ........++..|+|||.+. +.++.++|||||||++|||++ |
T Consensus 152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 230 (296)
T cd05051 152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY-YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCR 230 (296)
T ss_pred cccccchhceeecCCCceEEccccceeecccCcc-eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCC
Confidence 9999999999999999999999999876543321 11223456678899999664 478999999999999999998 7
Q ss_pred CCCCCCCchhhHHHHHHhc--ccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 382 MKPIDDNNTILYYYLVVEQ--EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 382 ~~p~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..||............... ........ .....++..+.+++.+||..+|.+||++.+|++.|++
T Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 231 EQPYEHLTDQQVIENAGHFFRDDGRQIYL------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred CCCCCCcChHHHHHHHHhccccccccccC------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 7888765432221111110 00000000 0112234568899999999999999999999998863
No 179
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.6e-38 Score=302.74 Aligned_cols=256 Identities=27% Similarity=0.412 Sum_probs=198.4
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.++..||+|+||.||+|... +++.||+|.+.......... .........+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSK----DRKRSMLDALAREIALLKELQHENIVQYLGSSLD 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchh----HHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe
Confidence 456689999999999999875 47899999986543321111 0111224568899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~--~~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 78 ADHLNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHN--RGIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred CCccEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHh--cCcccccCCHHHEEEcCCCCEEecccCC
Confidence 7889999999999999999773 468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCccc---ceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 330 VKMSETSNMKT---MYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 330 a~~~~~~~~~~---~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
++......... .......|+..|+|||.+. +.++.++|+|||||++|+|++|..||...............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----- 227 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN----- 227 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc-----
Confidence 88665321111 1112346889999999664 45788999999999999999999999875432221111110
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ ..+..++..+.++|.+||..+|++||++.++++
T Consensus 228 --~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 --ASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred --CCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000 011234556888999999999999999999875
No 180
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8.8e-39 Score=307.71 Aligned_cols=255 Identities=26% Similarity=0.443 Sum_probs=197.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC-C---cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-G---MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~---~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+++.+.||+|+||.||+|.++. + ..||||.++.... . .....|..|+.++++++||||++++++
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~l~~l~h~ni~~~~~~ 73 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT------E------KQRRDFLSEASIMGQFDHPNIIHLEGV 73 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC------H------HHHHHHHHHHHHHHhCCCcCcceEEEE
Confidence 4566899999999999999763 3 3699999864311 1 114568999999999999999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...++||||+++++|.+++.... ..+++.++..++.|++.||.|||+ +|++|+||||+||+++.++.+||+|
T Consensus 74 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~--~g~~H~dl~p~nili~~~~~~kl~d 149 (269)
T cd05065 74 VTKSRPVMIITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSE--MNYVHRDLAARNILVNSNLVCKVSD 149 (269)
T ss_pred ECCCCceEEEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccChheEEEcCCCcEEECC
Confidence 777 77899999999999999987643 368999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCC--CCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhccc
Q psy520 327 FGIVKMSETSNMKTMYTENLTG--TRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 402 (455)
||+++................| +..|+|||.+. +.++.++|||||||++||+++ |..||...........+. ...
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-~~~ 228 (269)
T cd05065 150 FGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-QDY 228 (269)
T ss_pred CccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCC
Confidence 9998765433211111111222 45799999764 467889999999999999987 999998765332222221 111
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.. .....++..+.+++.+|+..+|.+||++.+|+..|++++
T Consensus 229 ~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 269 (269)
T cd05065 229 RL----------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269 (269)
T ss_pred cC----------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 10 011234456788999999999999999999999998764
No 181
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2e-38 Score=310.62 Aligned_cols=262 Identities=24% Similarity=0.345 Sum_probs=197.5
Q ss_pred CCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecc
Q psy520 166 FNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 166 f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
|.....|++.++||+|+||.||+|.++ +++.||+|.++....... ...+.+|+.++++++||||+++
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~nI~~~ 69 (301)
T cd07873 2 FGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA------------PCTAIREVSLLKDLKHANIVTL 69 (301)
T ss_pred CccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc------------hhHHHHHHHHHHhcCCCCcceE
Confidence 344455677799999999999999986 478999999864432111 2236789999999999999999
Q ss_pred cccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 245 LGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
++++.+ ...++||||+. ++|.+++.... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.+|
T Consensus 70 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~--~~i~H~dlkp~Nil~~~~~~~k 144 (301)
T cd07873 70 HDIIHTEKSLTLVFEYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHR--RKVLHRDLKPQNLLINERGELK 144 (301)
T ss_pred EEEEecCCeEEEEEeccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCHHHEEECCCCcEE
Confidence 998876 78899999996 69999887643 368899999999999999999999 8999999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-c
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
|+|||++....... .......+++.|+|||.+.+ .++.++|||||||++|||+||.+||...+.......+.. -
T Consensus 145 l~dfg~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~ 221 (301)
T cd07873 145 LADFGLARAKSIPT---KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRIL 221 (301)
T ss_pred ECcCcchhccCCCC---CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 99999987543321 11223467889999997644 467899999999999999999999987653222211111 0
Q ss_pred ccch----hhhcchh------hcCC-------ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPV----REVLDKE------AGEW-------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~----~~~~d~~------~~~~-------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+. ....+.. .... ....++..+.+||.+|+..||.+|||++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 222 GTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0010 1110000 0000 01234556889999999999999999999986
No 182
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.4e-38 Score=308.59 Aligned_cols=252 Identities=25% Similarity=0.419 Sum_probs=195.4
Q ss_pred cCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
....+||+|+||.||++... ++..+|+|.+..... . ....|.+|++++++++|+||+++++
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~i~~~~~ 74 (280)
T cd05092 8 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE------S-------ARQDFQREAELLTVLQHQHIVRFYG 74 (280)
T ss_pred eeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH------H-------HHHHHHHHHHHHhcCCCCCCceEEE
Confidence 44589999999999999742 256789998753221 1 1345899999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCc
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNN------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 313 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~N 313 (455)
++.+ ...+++|||+++++|.+++..... ...+++.++..++.|++.|++|||+ ++++||||||+|
T Consensus 75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~~i~H~dlkp~n 152 (280)
T cd05092 75 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS--LHFVHRDLATRN 152 (280)
T ss_pred EEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH--CCeecccccHhh
Confidence 8877 778999999999999999976431 1358899999999999999999999 899999999999
Q ss_pred EEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchh
Q psy520 314 VLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTI 391 (455)
Q Consensus 314 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~ 391 (455)
||+++++.+||+|||+++........ .......+++.|+|||.+. ..++.++|||||||++|||++ |.+||......
T Consensus 153 il~~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 231 (280)
T cd05092 153 CLVGQGLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT 231 (280)
T ss_pred EEEcCCCCEEECCCCceeEcCCCcee-ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH
Confidence 99999999999999998755432211 1112334577899999664 467899999999999999998 99999765533
Q ss_pred hHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 392 LYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 392 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.......... .. ..+..++..+.+++.+||..||.+||++.+|++.|++
T Consensus 232 ~~~~~~~~~~-~~----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 232 EAIECITQGR-EL----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHHcCc-cC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 2222221111 00 0112334558899999999999999999999999863
No 183
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.1e-38 Score=313.08 Aligned_cols=254 Identities=27% Similarity=0.427 Sum_probs=196.2
Q ss_pred cCCCcccccCCEEEEEEEEcC-Cc----EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+..+.||+|+||.||+|.+.. |. .||+|.+..... . .....+.+|+.+++.++||||++++++
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~~~~l~h~niv~~~~~ 77 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG------P------KANVEFMDEALIMASMDHPHLVRLLGV 77 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC------H------HHHHHHHHHHHHHHhCCCCCcccEEEE
Confidence 445889999999999998753 43 578888753221 0 012348899999999999999999999
Q ss_pred ccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+.....+++++|+++|+|.+++.... ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~--~~ivH~dikp~Nill~~~~~~kL~Df 153 (303)
T cd05110 78 CLSPTIQLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDF 153 (303)
T ss_pred EcCCCceeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhh--cCeeccccccceeeecCCCceEEccc
Confidence 87777789999999999999987642 358999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++....... ........++..|+|||.+. ..++.++|||||||++|||++ |..||................ ..
T Consensus 154 g~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~- 230 (303)
T cd05110 154 GLARLLEGDEK-EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RL- 230 (303)
T ss_pred cccccccCccc-ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-CC-
Confidence 99986543321 11122345677899999665 457889999999999999998 999997654322211111111 00
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+..++..+.+++..||..+|++||+++++++.|+++.+
T Consensus 231 ---------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 231 ---------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111233457788999999999999999999999998754
No 184
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.9e-38 Score=303.71 Aligned_cols=252 Identities=29% Similarity=0.424 Sum_probs=192.1
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|...+.||+|+||.||+|... +++.||+|++......... ......+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 75 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPET--------SKEVSALECEIQLLKNLQHERIVQYYGCLRD 75 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchh--------HHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc
Confidence 345599999999999999876 4889999998654321110 0114558899999999999999999997654
Q ss_pred ---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...++++||+++++|.+++.. ...+++...+.++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 76 ~~~~~~~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~--~~i~H~~l~p~nil~~~~~~~~l~df 150 (266)
T cd06651 76 RAEKTLTIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHS--NMIVHRDIKGANILRDSAGNVKLGDF 150 (266)
T ss_pred CCCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCEEEccC
Confidence 466889999999999999976 3458999999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+++................++..|+|||.+.+ .++.++|+|||||++|||++|..||.................
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~---- 226 (266)
T cd06651 151 GASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT---- 226 (266)
T ss_pred CCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC----
Confidence 998765332111111233568899999997754 578899999999999999999999986543222111111000
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ...+..+...+.+++ +||..+|++||++++|++
T Consensus 227 --~----~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 --N----PQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred --C----CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0 001123455677778 577789999999999975
No 185
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-38 Score=302.05 Aligned_cols=247 Identities=25% Similarity=0.350 Sum_probs=197.2
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
.+.+.||+|+||.||+|.++ +++.|++|.+...... ......+.+|++++++++||||+++++++.+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 71 (256)
T cd08529 3 EILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-----------RREREEAIDEARVLAKLDSSYIIRYYESFLDK 71 (256)
T ss_pred eEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-----------HHHHHHHHHHHHHHHhcCCCCeehheeeeccC
Confidence 34488999999999999986 4899999998643221 0114558899999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.... ...+++.++..++.+++.||.|||+ .|++|+||||+||+++.++.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~--~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 72 GKLNIVMEYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHS--KKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred CEEEEEEEeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 78899999999999999998642 3578999999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......|++.|+|||++. +.++.++|+||||+++|+|++|..||.................
T Consensus 149 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------- 218 (256)
T cd08529 149 KLLSDNTN---FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF------- 218 (256)
T ss_pred eeccCccc---hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-------
Confidence 86543321 123457889999999764 4578899999999999999999999987663322222111110
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ....++..+.+++.+|+..+|++||++.++++
T Consensus 219 ---~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 219 ---PP-VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ---CC-CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 00 11134456888999999999999999999975
No 186
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.1e-38 Score=304.52 Aligned_cols=244 Identities=29% Similarity=0.445 Sum_probs=195.6
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNI 251 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
|.+.+.||+|+||.||+|... ++.||+|.++.... ...+.+|+.++++++|||++++++++...
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~-~~~~~iK~~~~~~~---------------~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGEYT-GQKVAVKNIKCDVT---------------AQAFLEETAVMTKLHHKNLVRLLGVILHN 71 (254)
T ss_pred ceeeeeeccCCCCceEecccC-CCceEEEeecCcch---------------HHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 355689999999999999864 78999999853211 34588999999999999999999988777
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++.... ...+++..+..++.|++.||.|||+ .|++||||||+||+++.++.+||+|||++.
T Consensus 72 ~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~--~~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 72 GLYIVMELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLES--KKLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred CcEEEEECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEEcCCCcEEECCCccce
Confidence 7899999999999999997643 3458999999999999999999999 899999999999999999999999999987
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
...... .....+..|+|||.+. +.++.++|+|||||++|||++ |..||............... ..
T Consensus 149 ~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~------ 215 (254)
T cd05083 149 VGSMGV------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-YR------ 215 (254)
T ss_pred eccccC------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-CC------
Confidence 543211 1223456799999664 567889999999999999998 99999876543222222111 00
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
......++..+.+++.+||..+|++||+++++++.|++
T Consensus 216 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 ----MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 01112345567889999999999999999999998864
No 187
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.1e-38 Score=303.41 Aligned_cols=251 Identities=28% Similarity=0.414 Sum_probs=199.2
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
|++.++||+|+||.||+|.+++++.||||.+..... ....+.+|+.++++++|+||+++++++.+
T Consensus 8 ~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05034 8 LKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM--------------SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE 73 (261)
T ss_pred eeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc--------------CHHHHHHHHHHHhhCCCCCEeeeeeeeecC
Confidence 456689999999999999988778899999864321 13448899999999999999999998777
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.... ...+++.++..++.+++.|+.|||+ .+++|+||||+||+++.++.+||+|||++
T Consensus 74 ~~~~~v~e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~--~~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 74 EPIYIVTEYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLES--RNYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred CceEEEEeccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcchheEEEcCCCCEEECccccc
Confidence 78899999999999999997643 3468999999999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
........ .......++..|+|||.+. +..+.++|+||||+++|++++ |+.||............... ..
T Consensus 151 ~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~----- 222 (261)
T cd05034 151 RLIEDDEY--TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-YR----- 222 (261)
T ss_pred eeccchhh--hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CC-----
Confidence 76543211 1112234567899999665 457889999999999999999 99999765533222221111 00
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
...+...+..+.+++.+|+..+|.+||+++++.+.|+.+
T Consensus 223 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 223 -----MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred -----CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 001112345688899999999999999999999999863
No 188
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.3e-38 Score=307.69 Aligned_cols=257 Identities=22% Similarity=0.285 Sum_probs=189.3
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC---CCcceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC---KHVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~ 247 (455)
|++.+.||+|+||+||+|.++ +++.||+|.++........ ...+.+|+.+++++ .||||++++++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~-----------~~~~~~e~~~l~~l~~~~h~ni~~~~~~ 70 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL-----------PLSTVREVALLKRLEAFDHPNIVRLMDV 70 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC-----------chHHHHHHHHHHHhhhcCCCCeeeeeee
Confidence 556689999999999999987 4889999998754321110 12255677766655 79999999997
Q ss_pred ccC------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 248 CNN------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 248 ~~~------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
+.. ...++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+ +|++||||||+||+++.++.
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili~~~~~ 146 (288)
T cd07863 71 CATSRTDRETKVTLVFEHVD-QDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGQ 146 (288)
T ss_pred eccccCCCCceEEEEEcccc-cCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCC
Confidence 643 34689999996 58988887643 2458999999999999999999999 89999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE- 399 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~- 399 (455)
+||+|||+++...... ......||..|+|||++ .+.++.++|||||||++|+|++|.+||...........+..
T Consensus 147 ~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 222 (288)
T cd07863 147 VKLADFGLARIYSCQM----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 222 (288)
T ss_pred EEECccCccccccCcc----cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHH
Confidence 9999999988654322 12345789999999966 44678999999999999999999999976653221111111
Q ss_pred -cc---cchhhh-------cchhhcC---CChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 400 -QE---VPVREV-------LDKEAGE---WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 -~~---~~~~~~-------~d~~~~~---~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ...+.. ..+.... .....++..+.+||.+||..||++||++.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 223 IGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 000000 0000000 001234566889999999999999999999874
No 189
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.6e-39 Score=323.52 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=191.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++..+. ++.||||+++...... ......+.+|+.++.+++||||+++++.+.+
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 72 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE----------KEQVAHIRAERDILVEADGAWVVKMFYSFQD 72 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh----------hhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 3455899999999999999864 8899999997432211 1114557889999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~--~givHrDLkp~NIli~~~~~vkL~DfG~ 147 (360)
T cd05627 73 KRNLYLIMEFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQ--LGFIHRDIKPDNLLLDAKGHVKLSDFGL 147 (360)
T ss_pred CCEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEECCCCCEEEeeccC
Confidence 788999999999999999976 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcc--------------------------------cceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHH
Q psy520 330 VKMSETSNMK--------------------------------TMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILL 376 (455)
Q Consensus 330 a~~~~~~~~~--------------------------------~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~ 376 (455)
+......... ........||+.|+|||++.+ .++.++|||||||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvily 227 (360)
T cd05627 148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (360)
T ss_pred CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceee
Confidence 8754321100 000123579999999997644 5788999999999999
Q ss_pred HHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC---HHHHHH
Q psy520 377 ELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS---MRDIVD 447 (455)
Q Consensus 377 elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs---~~evl~ 447 (455)
||++|..||...........+......+ ...+....+..+.+||.++| .+|.+|++ +.++++
T Consensus 228 el~tG~~Pf~~~~~~~~~~~i~~~~~~~--------~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 228 EMLIGYPPFCSETPQETYRKVMNWKETL--------VFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred ecccCCCCCCCCCHHHHHHHHHcCCCce--------ecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 9999999998766443333222111000 00001123455778888877 49999985 556543
No 190
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.2e-38 Score=304.96 Aligned_cols=251 Identities=25% Similarity=0.382 Sum_probs=185.1
Q ss_pred cccccCCEEEEEEEEcC---CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cc
Q psy520 177 KLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.||+|+||.||+|...+ ...+|+|.+..... . .....|.+|+.+++.++||||+++++.+.+ ..
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~ 69 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT------P------DEQLLFLQEVQPYRELNHPNVLQCLGQCIESIP 69 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCC------h------HHHHHHHHHHHHHHhCCCCCcceEEEEECCCCc
Confidence 59999999999997653 34678887643211 0 013458899999999999999999998877 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.++||||+++|+|.+++..... ....++.....++.|++.||+|||+ ++++||||||+|||++.++.+||+|||++
T Consensus 70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 147 (269)
T cd05042 70 YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ--ADFIHSDLALRNCQLTADLSVKIGDYGLA 147 (269)
T ss_pred eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh--cCEecccccHhheEecCCCcEEEeccccc
Confidence 8999999999999999977543 2335678889999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC--------CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHH-HHhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC--------QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL-VVEQ 400 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~-~~~~ 400 (455)
+........ .......++..|+|||++.. ..+.++|||||||++|||++ |..||........... ....
T Consensus 148 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 226 (269)
T cd05042 148 LEQYPEDYY-ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQ 226 (269)
T ss_pred cccccchhe-eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhcc
Confidence 754332111 11123456778999997532 35779999999999999999 8889976653221111 1111
Q ss_pred ccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...+. .+. ....++..+.+++..|+ .||.+||++++|++.|.
T Consensus 227 ~~~~~---~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 227 DIKLP---KPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CccCC---CCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11111 111 11234455666777676 69999999999999873
No 191
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-38 Score=305.79 Aligned_cols=247 Identities=23% Similarity=0.366 Sum_probs=192.8
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
.+.+.||+|+||.||+|.+. +++.||+|+++.... .. ...+.+|+.+++.++||||+++++.+.+
T Consensus 12 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~-------~~~~~~e~~~~~~l~h~~ii~~~~~~~~~ 78 (267)
T cd06645 12 ELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG------ED-------FAVVQQEIIMMKDCKHSNIVAYFGSYLRR 78 (267)
T ss_pred HHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch------hH-------HHHHHHHHHHHHhCCCCCeeeEEEEEEeC
Confidence 34488999999999999876 488999999864321 11 2347789999999999999999997766
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
+..++||||+++++|.+++.. ...+++.++..++.|++.||.|||+ .|++|+||||+||+++.++.+||+|||++
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 79 DKLWICMEFCGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHS--KGKMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECcceee
Confidence 788999999999999999876 3468999999999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccc----cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
....... .......|+..|+|||.+ .+.++.++|+|||||++|+|++|..||.....................
T Consensus 154 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T cd06645 154 AQITATI---AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPK 230 (267)
T ss_pred eEccCcc---cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCc
Confidence 7553221 112345789999999976 335788999999999999999999999765432211111111111000
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ....++..+.++|.+||..+|++||++++|++
T Consensus 231 ~~-------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 231 LK-------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cc-------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00 01123445888999999999999999999875
No 192
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5e-38 Score=299.50 Aligned_cols=249 Identities=30% Similarity=0.467 Sum_probs=199.5
Q ss_pred CcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 176 NKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.||+|+||.||+|.+.. +..||+|.++...... ....+.+|+..+.+++|+|++++++++.+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~------------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 68 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE------------ERKDFLKEARVMKKLGHPNVVRLLGVCTEE 68 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh------------HHHHHHHHHHHHhhcCCCChheeeeeecCC
Confidence 469999999999999864 7889999987543211 14568899999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCC------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEE
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNN------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
...++||||+++++|.+++..... ...+++..++.++.|++.||.|||+ ++++||||||+||+++.++.+||
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~nili~~~~~~~l 146 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS--KKFVHRDLAARNCLVGEDLVVKI 146 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc--CCcccCccCcceEEECCCCcEEE
Confidence 788999999999999999987521 2579999999999999999999999 89999999999999999999999
Q ss_pred ccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhccc
Q psy520 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+|||.++....... ........++..|+|||.+. +.++.++||||||+++|||++ |..||............... .
T Consensus 147 ~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~ 224 (262)
T cd00192 147 SDFGLSRDVYDDDY-YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG-Y 224 (262)
T ss_pred cccccccccccccc-cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-C
Confidence 99999987654431 11233456788999999764 467889999999999999999 69999876533222221110 0
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
....+..++..+.+++.+|+..+|.+||++.++++.|+
T Consensus 225 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 ----------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00112233566888999999999999999999998874
No 193
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.5e-38 Score=305.04 Aligned_cols=249 Identities=27% Similarity=0.455 Sum_probs=190.8
Q ss_pred CcccccCCEEEEEEEEcC-Cc--EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-
Q psy520 176 NKLGEGQFGTVYYGKLKN-GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 250 (455)
+.||+|+||.||+|.+++ +. .+|+|.++.... . .....+.+|++++.++ +||||+++++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 68 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------K------DDHRDFAGELEVLCKLGHHPNIINLLGACEHR 68 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC------H------HHHHHHHHHHHHHHhhccCCCeeeEEEEEecC
Confidence 358999999999999864 33 468888763221 0 0134588999999999 79999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVN-------------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD 317 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~ 317 (455)
...++||||+++|+|.+++.... ....+++.++..++.|++.||+|||+ ++++||||||+||+++
T Consensus 69 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nili~ 146 (270)
T cd05047 69 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVG 146 (270)
T ss_pred CCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccccceEEEc
Confidence 77899999999999999997532 12358899999999999999999999 8999999999999999
Q ss_pred CCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHH
Q psy520 318 ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYY 395 (455)
Q Consensus 318 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~ 395 (455)
+++.+||+|||++...... ........+..|+|||++. ..++.++|+|||||++|||++ |..||..........
T Consensus 147 ~~~~~kl~dfgl~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~ 222 (270)
T cd05047 147 ENYVAKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 222 (270)
T ss_pred CCCeEEECCCCCccccchh----hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHH
Confidence 9999999999997632211 0111223456799999764 457889999999999999997 999997654322211
Q ss_pred HHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
... ..... + .+..++..+.+++.+|+..+|.+||++.+++..|++++
T Consensus 223 ~~~-~~~~~----~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 223 KLP-QGYRL----E------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHh-CCCCC----C------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111 00000 0 01123445788999999999999999999999999886
No 194
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.8e-38 Score=330.04 Aligned_cols=252 Identities=21% Similarity=0.274 Sum_probs=183.4
Q ss_pred CCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC------Ccceec
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK------HVNLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~ 243 (455)
.|++.++||+|+||+||+|.+.. ++.||||+++.... . ...+..|++++..++ |.+++.
T Consensus 130 ~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~------~--------~~~~~~e~~~l~~l~~~~~~~~~~i~~ 195 (467)
T PTZ00284 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK------Y--------TRDAKIEIQFMEKVRQADPADRFPLMK 195 (467)
T ss_pred cEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh------h--------HHHHHHHHHHHHHHhhcCcccCcceee
Confidence 35666999999999999998764 78899999963211 0 122445666666554 456888
Q ss_pred ccccccC--cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC-
Q psy520 244 LLGFCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF- 320 (455)
Q Consensus 244 l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~- 320 (455)
+++++.. ...|+||+++ +++|.+++... ..+++..+..|+.|++.||.|||+. .|||||||||+|||++.++
T Consensus 196 i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~-~gIiHrDlKP~NILl~~~~~ 270 (467)
T PTZ00284 196 IQRYFQNETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTE-LHLMHTDLKPENILMETSDT 270 (467)
T ss_pred eEEEEEcCCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhc-CCeecCCCCHHHEEEecCCc
Confidence 8887754 5788999988 88999998763 4699999999999999999999971 3899999999999998765
Q ss_pred ---------------ceEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCC
Q psy520 321 ---------------VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKP 384 (455)
Q Consensus 321 ---------------~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p 384 (455)
.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|||++|++|
T Consensus 271 ~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~p 344 (467)
T PTZ00284 271 VVDPVTNRALPPDPCRVRICDLGGCCDERH------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLL 344 (467)
T ss_pred ccccccccccCCCCceEEECCCCccccCcc------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 499999998764321 1234689999999997654 688999999999999999999999
Q ss_pred CCCCchhhHHHHHHhcccchh-------------hhcchhh-----------------cCCChhHHHHHHHHHHHHhccc
Q psy520 385 IDDNNTILYYYLVVEQEVPVR-------------EVLDKEA-----------------GEWNETHVETLISIVFEKCCVF 434 (455)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~-------------~~~d~~~-----------------~~~~~~~~~~~l~~Li~~~l~~ 434 (455)
|+..+.......+......++ ++++... ...........+.+||.+||..
T Consensus 345 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 424 (467)
T PTZ00284 345 YDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHY 424 (467)
T ss_pred CCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCc
Confidence 987664322222211100000 0000000 0000011234577999999999
Q ss_pred CcCCCCCHHHHHH
Q psy520 435 EKDKRASMRDIVD 447 (455)
Q Consensus 435 dp~~RPs~~evl~ 447 (455)
||++||+++|+++
T Consensus 425 dP~~R~ta~e~L~ 437 (467)
T PTZ00284 425 DRQKRLNARQMTT 437 (467)
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999986
No 195
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.4e-38 Score=314.92 Aligned_cols=253 Identities=26% Similarity=0.346 Sum_probs=190.0
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|.+.+.||+|+||+||+|.+. +++.||||++...... ......+.+|+.++++++||||+++++++.
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 84 (343)
T cd07878 16 RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-----------LIHARRTYRELRLLKHMKHENVIGLLDVFT 84 (343)
T ss_pred hhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-----------hHHHHHHHHHHHHHHhcCCCchhhhhhhhc
Confidence 3556699999999999999875 4789999998643210 011345778999999999999999998664
Q ss_pred C-------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 250 N-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. ...|++++++ +++|.+++.. ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrdikp~Nil~~~~~~~ 157 (343)
T cd07878 85 PATSIENFNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHS--AGIIHRDLKPSNVAVNEDCEL 157 (343)
T ss_pred ccccccccCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecccCChhhEEECCCCCE
Confidence 2 3458899988 8899887753 358999999999999999999999 899999999999999999999
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE- 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~- 399 (455)
||+|||+++..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..........
T Consensus 158 kl~Dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07878 158 RILDFGLARQADDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV 231 (343)
T ss_pred EEcCCccceecCCC------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 99999998865332 224578999999997754 468899999999999999999999987653222111111
Q ss_pred cccchhhhcch-----------hhcCCCh-------hHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 400 QEVPVREVLDK-----------EAGEWNE-------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 ~~~~~~~~~d~-----------~~~~~~~-------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+....+.. .....+. ......+.+||.+||..||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11111111000 0000011 112345778999999999999999999985
No 196
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.3e-38 Score=316.72 Aligned_cols=254 Identities=21% Similarity=0.260 Sum_probs=194.3
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||+||++.++. ++.||+|++.+.... .......|..|+.++..++|+||+++++++.+
T Consensus 3 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 72 (332)
T cd05623 3 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML----------KRAETACFREERDVLVNGDNQWITTLHYAFQD 72 (332)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH----------HhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec
Confidence 4566899999999999999875 788999998642210 01113457889999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~--~~iiHrDlkp~Nili~~~~~~kL~DfG~ 148 (332)
T cd05623 73 ENNLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQ--LHYVHRDIKPDNILMDMNGHIRLADFGS 148 (332)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEECCCCCEEEeecch
Confidence 78899999999999999997643 368999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+....... ........||+.|+|||++. +.++.++|||||||++|||++|..||...........+......
T Consensus 149 a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~ 226 (332)
T cd05623 149 CLKLMEDG--TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 226 (332)
T ss_pred heecccCC--cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcc
Confidence 87543221 12233467999999999764 34688999999999999999999999876644333333221111
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcC--CCCCHHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKD--KRASMRDIVDL 448 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~--~RPs~~evl~~ 448 (455)
.. + ......++..+.+|+.+|+..+++ .|++++++++.
T Consensus 227 ~~--~-----p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 FQ--F-----PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cc--C-----CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 10 0 001123456688888888866544 37899888653
No 197
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.8e-38 Score=308.87 Aligned_cols=250 Identities=20% Similarity=0.270 Sum_probs=192.7
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+..+.||+|+||+||+|.+. +++.||+|.+........ .....+.+|++++++++|+||+++++++..
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~ 72 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKR----------KGESMALNEKQILEKVNSQFVVNLAYAYETK 72 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhh----------hHHHHHHHHHHHHHHcCCcCceeEEEEEecC
Confidence 34588999999999999986 488999999865322110 013447789999999999999999987665
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
+..|+||||+++++|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||++
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~--~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 73 DALCLVLTIMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHR--ENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred CEEEEEEEeccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 78899999999999998887543 3469999999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... ......|+..|+|||.+ .+.++.++|+|||||++|||++|..||.....................
T Consensus 150 ~~~~~~~----~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~--- 222 (285)
T cd05632 150 VKIPEGE----SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE--- 222 (285)
T ss_pred eecCCCC----cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc---
Confidence 7543221 12245789999999966 446788999999999999999999999876533221111110000000
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCC-----HHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
.....++..+.+|+.+|+..||++||+ +.+++.
T Consensus 223 -----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 223 -----VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred -----ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 011223445788999999999999999 566654
No 198
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.2e-38 Score=309.61 Aligned_cols=261 Identities=26% Similarity=0.347 Sum_probs=194.9
Q ss_pred CcCCCcccccCCEEEEEEEEcC-----------------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHH
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-----------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLS 234 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 234 (455)
|++.++||+|+||.||++.+.+ +..||+|+++.... . .....|.+|+.+++
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~------~------~~~~~~~~E~~~l~ 74 (296)
T cd05095 7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN------K------NARNDFLKEIKIMS 74 (296)
T ss_pred ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC------H------HHHHHHHHHHHHHH
Confidence 5667999999999999986431 34689999864321 0 01345889999999
Q ss_pred cCCCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeE
Q psy520 235 QCKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN--------TPPLDSNKRYSIALGVAEALHYLHSLSKPII 305 (455)
Q Consensus 235 ~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~ii 305 (455)
.++|+||+++++++.. ...++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+ .|++
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~ 152 (296)
T cd05095 75 RLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS--LNFV 152 (296)
T ss_pred hCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH--CCee
Confidence 9999999999998876 788999999999999999976432 1247788999999999999999999 8999
Q ss_pred ecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccc-ccCCCCChhhHHHHHHHHHHHHc--CC
Q psy520 306 HRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT--GM 382 (455)
Q Consensus 306 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~-~~~~~s~~sDi~SlGvvl~ellt--G~ 382 (455)
||||||+|||++.++.++|+|||+++........ .......++..|+|||. ..+.++.++|+|||||++|||++ |.
T Consensus 153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~ 231 (296)
T cd05095 153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY-RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE 231 (296)
T ss_pred cccCChheEEEcCCCCEEeccCcccccccCCcce-eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998765332211 11222345678999994 45678999999999999999998 77
Q ss_pred CCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.||.............. ..... ........+..++..+.+|+.+||..||++||++.+|++.|++
T Consensus 232 ~p~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 232 QPYSQLSDEQVIENTGE---FFRDQ-GRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred CCccccChHHHHHHHHH---HHhhc-cccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 88875543221111100 00000 0000000112344668899999999999999999999999874
No 199
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.4e-39 Score=319.09 Aligned_cols=241 Identities=23% Similarity=0.295 Sum_probs=187.2
Q ss_pred ccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC---CCcceecccccccC-cc
Q psy520 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC---KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-~~ 252 (455)
||+|+||+||+|+++. ++.||||++........ .....+..|..++.++ .||||+++++.+.+ ..
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~ 70 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAK----------KEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSD 70 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhh----------hHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCe
Confidence 7999999999999864 89999999864322110 0123355677777665 69999999997766 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~--~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~ 145 (330)
T cd05586 71 LYLVTDYMSGGELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHK--YDIVYRDLKPENILLDATGHIALCDFGLSKA 145 (330)
T ss_pred EEEEEcCCCCChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEecCCcCcC
Confidence 8999999999999999876 3468999999999999999999999 8999999999999999999999999999875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcch
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...........+......
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~------- 215 (330)
T cd05586 146 NLTDN---KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR------- 215 (330)
T ss_pred CCCCC---CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC-------
Confidence 43221 11335679999999997754 3688999999999999999999999876543333222222111
Q ss_pred hhcCCChhHHHHHHHHHHHHhcccCcCCCC----CHHHHHH
Q psy520 411 EAGEWNETHVETLISIVFEKCCVFEKDKRA----SMRDIVD 447 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP----s~~evl~ 447 (455)
.+...++..+.+||.+||..||++|| ++.++++
T Consensus 216 ----~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 216 ----FPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ----CCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 11122445678899999999999998 4566544
No 200
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.3e-38 Score=312.61 Aligned_cols=253 Identities=27% Similarity=0.433 Sum_probs=193.3
Q ss_pred cCCCcccccCCEEEEEEEEcC-Cc--EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 248 (455)
.+.+.||+|+||.||+|.++. +. .+|+|.++.... . .....|.+|+.++.++ +||||+++++++
T Consensus 10 ~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~------~------~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~ 77 (303)
T cd05088 10 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------K------DDHRDFAGELEVLCKLGHHPNIINLLGAC 77 (303)
T ss_pred eeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC------H------HHHHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence 445889999999999999753 44 457777643211 0 1134588999999999 899999999988
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcE
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 314 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NI 314 (455)
.. ...++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+ +|++||||||+||
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dlkp~Ni 155 (303)
T cd05088 78 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNI 155 (303)
T ss_pred CCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheE
Confidence 77 788999999999999999976431 2368999999999999999999999 8999999999999
Q ss_pred EECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhh
Q psy520 315 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTIL 392 (455)
Q Consensus 315 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~ 392 (455)
|++.++.+||+|||+++..... .......++..|+|||.+.+ .++.++|||||||++|||+| |..||.......
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 231 (303)
T cd05088 156 LVGENYVAKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE 231 (303)
T ss_pred EecCCCcEEeCccccCcccchh----hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH
Confidence 9999999999999998632211 11112234667999997654 46889999999999999998 999997655332
Q ss_pred HHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 393 YYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 393 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
...... ..... ..+..++..+.+|+.+|+..+|++||++++++..|++++.
T Consensus 232 ~~~~~~-~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 232 LYEKLP-QGYRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHHHHh-cCCcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 211111 00000 0011234457889999999999999999999999988753
No 201
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.9e-38 Score=308.63 Aligned_cols=251 Identities=21% Similarity=0.280 Sum_probs=193.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||+|+||.||++.+. +++.||||.+........ . ....+.+|+.++++++|+|++++++.+.+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~---~-------~~~~~~~E~~il~~l~~~~i~~~~~~~~~ 71 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR---K-------GESMALNEKQILEKVNSRFVVSLAYAYET 71 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccch---H-------HHHHHHHHHHHHHhCCCCCeeeeeEEEec
Confidence 345588999999999999987 488999999865432110 0 12347789999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||+
T Consensus 72 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 72 KDALCLVLTLMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQ--ERIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred CCEEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 78899999999999999886533 2468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ .....||..|+|||++. +.++.++|+|||||++|+|++|..||.............. ..
T Consensus 149 ~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~-------~~ 217 (285)
T cd05630 149 AVHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-------LV 217 (285)
T ss_pred eeecCCCcc----ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHh-------hh
Confidence 876543221 12347899999999764 4678899999999999999999999986542111111000 00
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCC-----HHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
... .......++..+.+|+.+||..||.+||+ ++|+++
T Consensus 218 ~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 218 KEV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 000 00111234455889999999999999999 788876
No 202
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.7e-38 Score=306.57 Aligned_cols=254 Identities=28% Similarity=0.462 Sum_probs=195.5
Q ss_pred CcCCCcccccCCEEEEEEEEc------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
|++.+.||+|+||.||+|.+. ++..||+|.+..... . .....|.+|+.+++++.||||++++
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~------~------~~~~~~~~ei~~l~~l~h~~iv~~~ 74 (288)
T cd05050 7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------A------DMQADFQREAALMAEFDHPNIVKLL 74 (288)
T ss_pred ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC------H------HHHHHHHHHHHHHHhcCCCchheEE
Confidence 345589999999999999864 367899999864321 0 0134588999999999999999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeE
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVN-------------------NTPPLDSNKRYSIALGVAEALHYLHSLSKPII 305 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~ii 305 (455)
+++.+ ...++||||+++|+|.+++.... ....+++.+++.++.|++.||.|||+ ++++
T Consensus 75 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~--~~i~ 152 (288)
T cd05050 75 GVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE--RKFV 152 (288)
T ss_pred EEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--CCee
Confidence 98877 77899999999999999997532 12357889999999999999999999 8999
Q ss_pred ecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCC
Q psy520 306 HRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMK 383 (455)
Q Consensus 306 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~ 383 (455)
||||||+||+++.++.+||+|||+++........ .......++..|+|||.+ .+.++.++|||||||++|||++ |..
T Consensus 153 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~ 231 (288)
T cd05050 153 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQ 231 (288)
T ss_pred cccccHhheEecCCCceEECccccceecccCccc-cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998754322111 111223446679999965 4567899999999999999998 888
Q ss_pred CCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 384 PIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 384 p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
||................. . . .+...+..+.+|+.+||..+|.+||++.|+++.|++
T Consensus 232 p~~~~~~~~~~~~~~~~~~--~--------~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 232 PYYGMAHEEVIYYVRDGNV--L--------S-CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCCCCCHHHHHHHHhcCCC--C--------C-CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 9876543322221111110 0 0 011234568889999999999999999999999874
No 203
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2e-38 Score=304.90 Aligned_cols=250 Identities=29% Similarity=0.428 Sum_probs=193.6
Q ss_pred CcccccCCEEEEEEEEcC-------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 176 NKLGEGQFGTVYYGKLKN-------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
+.||+|+||.||+|++++ +..||||.+...... . ....|.+|+.++++++||||+++++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~-----~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~ 68 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD-----Q-------EKKEFLKEAHLMSNFNHPNIVKLLGVC 68 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccch-----h-------hHHHHHHHHHHHHhcCCCCeeeEeeee
Confidence 369999999999998753 257999988543210 0 134588999999999999999999988
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC---
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNN----TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF--- 320 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~--- 320 (455)
.+ ...++||||+++++|.+++..... ...+++.++..++.|++.||.|||+ .+++|+||||+||+++.++
T Consensus 69 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~ 146 (269)
T cd05044 69 LLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ--MHFIHRDLAARNCLVSEKGYDA 146 (269)
T ss_pred cCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh--CCcccCCCChheEEEecCCCCC
Confidence 77 788999999999999999975321 2458899999999999999999999 8899999999999999887
Q ss_pred --ceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHH
Q psy520 321 --VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 321 --~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
.+||+|||+++........ .......++..|+|||.+ .+..+.++|||||||++|||+| |..||...........
T Consensus 147 ~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~ 225 (269)
T cd05044 147 DRVVKIGDFGLARDIYKSDYY-RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH 225 (269)
T ss_pred CcceEECCccccccccccccc-ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHH
Confidence 8999999998765432211 111233567889999966 4567899999999999999998 9999976553222111
Q ss_pred HHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.... . .......++..+.++|.+||..+|.+||++++|++.|++
T Consensus 226 ~~~~-~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 226 VTAG-G----------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HhcC-C----------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1110 0 001122345668899999999999999999999998863
No 204
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.9e-38 Score=318.10 Aligned_cols=255 Identities=22% Similarity=0.271 Sum_probs=190.9
Q ss_pred CCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|++.+.||+|+||.||++.+.. ++.||||++....... .....+.+|+.+++.++||||+++++++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~ii~~~~~~ 92 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-----------THAKRAYRELVLMKCVNHKNIIGLLNVF 92 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc-----------hhHHHHHHHHHHHHhcCCCCccccceee
Confidence 345666999999999999999764 7899999986432110 0134477899999999999999999865
Q ss_pred cC-------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 249 NN-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 249 ~~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
.. ...|+||||+. ++|.+.+.. .+++..+..++.|++.||+|||+ +||+||||||+|||++.++.
T Consensus 93 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~ 164 (364)
T cd07875 93 TPQKSLEEFQDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCT 164 (364)
T ss_pred cccccccccCeEEEEEeCCC-CCHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhh--CCeecCCCCHHHEEECCCCc
Confidence 33 34689999995 578777754 47889999999999999999999 89999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE- 399 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~- 399 (455)
+||+|||+++...... ......||..|+|||++.+ .++.++|||||||++|||++|..||...+.......+..
T Consensus 165 ~kL~DfG~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 240 (364)
T cd07875 165 LKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240 (364)
T ss_pred EEEEeCCCccccCCCC----cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999998654321 1234578999999997654 578899999999999999999999987664322222211
Q ss_pred cccchhh-----------hcchhh--cC-------------CC---hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 400 QEVPVRE-----------VLDKEA--GE-------------WN---ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 ~~~~~~~-----------~~d~~~--~~-------------~~---~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
-..+.+. ...... .. +. .......+.+||.+|+..||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 241 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0111000 000000 00 00 0112345789999999999999999999986
No 205
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6.7e-38 Score=300.90 Aligned_cols=252 Identities=28% Similarity=0.385 Sum_probs=192.6
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++++.||+|+||.||+|.+.+ +..||||.+......... ......+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 75 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPET--------SKEVNALECEIQLLKNLLHERIVQYYGCLRD 75 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCccc--------HHHHHHHHHHHHHHHhcCCCCeeeEEeEecc
Confidence 4556999999999999999864 889999998643221110 0114568899999999999999999997754
Q ss_pred ---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.+||+||
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~l~Df 150 (265)
T cd06652 76 PMERTLSIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHS--NMIVHRDIKGANILRDSVGNVKLGDF 150 (265)
T ss_pred CCCceEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEecCCCCEEECcC
Confidence 3567899999999999998763 458899999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+++................|+..|+|||.+.+ ..+.++|+|||||++|||++|..||................
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~----- 225 (265)
T cd06652 151 GASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP----- 225 (265)
T ss_pred ccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC-----
Confidence 998765332111111233568999999997644 57889999999999999999999997654322211111010
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ....+...+..+.++|.+|+ .+|++||++++|++
T Consensus 226 ----~-~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 226 ----T-NPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred ----C-CCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 0 01112334556778888888 48999999999875
No 206
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3e-38 Score=300.55 Aligned_cols=247 Identities=29% Similarity=0.414 Sum_probs=194.9
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-ccee
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
++||+|+||.||++.+++++.||+|++...... .....|.+|+++++++.|+||+++++++.+ ...+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 68 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP------------DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIY 68 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH------------HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeE
Confidence 369999999999999877899999988643221 013458899999999999999999998877 7889
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
+||||+.+++|.+++.... ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||++....
T Consensus 69 ~v~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~--~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 69 IVMELVPGGSLLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLES--KNCIHRDLAARNCLVGENNVLKISDFGMSREEE 144 (251)
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence 9999999999999997643 368899999999999999999999 889999999999999999999999999987654
Q ss_pred CCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 335 TSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... ........++..|+|||.+. +.++.++|+|||||++|||+| |..||............... .
T Consensus 145 ~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-----------~ 212 (251)
T cd05041 145 GGIY-TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-----------Y 212 (251)
T ss_pred CCcc-eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-----------C
Confidence 2211 11111223456799999664 467889999999999999999 89999766533222221110 0
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
....+...+..+.+++.+|+..+|++||++.+|++.|+
T Consensus 213 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 213 RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 11112234556889999999999999999999999886
No 207
>KOG0577|consensus
Probab=100.00 E-value=7.2e-40 Score=325.05 Aligned_cols=240 Identities=28% Similarity=0.440 Sum_probs=199.6
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||.|+||-||-+++. +...||||++.-... +..+. -.....|+..|.+++|||++.+-|++.. ...
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGK------Qs~EK----WqDIlKEVrFL~~l~HPntieYkgCyLre~Ta 101 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK------QSNEK----WQDILKEVRFLRQLRHPNTIEYKGCYLREHTA 101 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeecccccc------ccHHH----HHHHHHHHHHHHhccCCCcccccceeeccchH
Confidence 78999999999999976 478899999853322 22222 3457889999999999999999998766 677
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
+|||||| -||-.|.+.-+. .|+.+..+..|+.+.+.||+|||+ ++.||||||..|||+.+.|.|||+|||.|...
T Consensus 102 WLVMEYC-lGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS--~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 102 WLVMEYC-LGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHS--HNRIHRDIKAGNILLSEPGLVKLADFGSASIM 176 (948)
T ss_pred HHHHHHH-hccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHH--hhHHhhhccccceEecCCCeeeeccccchhhc
Confidence 8999999 688888887654 489999999999999999999999 88999999999999999999999999988765
Q ss_pred cCCCcccceeccCCCCCCcCCcccc----cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
.. ...++|||.|||||++ .|+|+-++|||||||+..|+.-.++|+.+.+...-.+-+...+.+
T Consensus 177 ~P-------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesP------ 243 (948)
T KOG0577|consen 177 AP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP------ 243 (948)
T ss_pred Cc-------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCC------
Confidence 43 3468999999999965 578999999999999999999999999988754433333322211
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...++..++.|+..|+.+-|..|||.++++.
T Consensus 244 ----tLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 244 ----TLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred ----CCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 1234577888999999999999999999998865
No 208
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.4e-38 Score=300.41 Aligned_cols=246 Identities=28% Similarity=0.461 Sum_probs=197.8
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+++.+.||.|+||.||+|... |+.||||.++.... ....+.+|+.++++++|+||+++++++.+
T Consensus 8 ~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 72 (256)
T cd05039 8 LKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--------------AAQAFLAEASVMTTLRHPNLVQLLGVVLQG 72 (256)
T ss_pred ccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--------------HHHHHHHHHHHHHhcCCcceeeeEEEEcCC
Confidence 355689999999999999987 79999999864321 14568899999999999999999998876
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++..... ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||.+
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 73 NPLYIVTEYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEE--KNFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred CCeEEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh--CCccchhcccceEEEeCCCCEEEcccccc
Confidence 788999999999999999976432 368999999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+...... ....++..|+|||.+ .+.++.++|+||||+++||+++ |..||............... ..
T Consensus 150 ~~~~~~~------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~----- 217 (256)
T cd05039 150 KEASQGQ------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-YR----- 217 (256)
T ss_pred ccccccc------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-CC-----
Confidence 8653221 123445679999966 4567889999999999999997 99999766533222111110 00
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
...+...+..+.++|.+||..+|.+||++.++++.|+++
T Consensus 218 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 218 -----MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -----CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 001122345688899999999999999999999999764
No 209
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.1e-38 Score=301.27 Aligned_cols=248 Identities=23% Similarity=0.292 Sum_probs=197.0
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++.+. ++..||+|.++..... . ....+.+|+.++++++||||+++++.+.+
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-----~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 69 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-----S-------AVEDSRKEAVLLAKMKHPNIVAFKESFEA 69 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-----H-------HHHHHHHHHHHHHhCCCCCcceEEEEEEE
Confidence 456689999999999999986 4889999998643210 0 13457889999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++++|+||||+||++++++.++|+|||+
T Consensus 70 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dl~p~nili~~~~~~~l~dfg~ 146 (255)
T cd08219 70 DGHLYIVMEYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHE--KRVLHRDIKSKNIFLTQNGKVKLGDFGS 146 (255)
T ss_pred CCEEEEEEeeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEECCCCcEEEcccCc
Confidence 78899999999999999887533 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++...... .......|++.|+|||++.+ ..+.++|+||||+++|+|++|..||...+..............
T Consensus 147 ~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----- 218 (255)
T cd08219 147 ARLLTSPG---AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK----- 218 (255)
T ss_pred ceeecccc---cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC-----
Confidence 87654322 11234578999999997754 5788999999999999999999999876532222211111100
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
..+..++..+.++|.+||..||++||++.+++.+
T Consensus 219 ------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 ------PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0112344558899999999999999999999864
No 210
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-38 Score=322.30 Aligned_cols=252 Identities=23% Similarity=0.312 Sum_probs=190.5
Q ss_pred CCcCCCcccccCCEEEEEEEEcC---CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
.|++.+.||+|+||.||++...+ +..||||.+.... .+.+|++++++++||||++++++
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------------------~~~~E~~il~~l~h~~iv~~~~~ 154 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------------------TPGREIDILKTISHRAIINLIHA 154 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc------------------cHHHHHHHHHhcCCCCccceeee
Confidence 36677999999999999997642 5789999875321 15689999999999999999997
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.. ...|+|||++ +++|.+++.. ...+++..++.++.|++.||.|||+ +||+||||||+|||++.++.+||+|
T Consensus 155 ~~~~~~~~lv~e~~-~~~l~~~l~~---~~~l~~~~~~~i~~ql~~aL~~LH~--~givHrDlkp~Nill~~~~~~~l~D 228 (392)
T PHA03207 155 YRWKSTVCMVMPKY-KCDLFTYVDR---SGPLPLEQAITIQRRLLEALAYLHG--RGIIHRDVKTENIFLDEPENAVLGD 228 (392)
T ss_pred EeeCCEEEEEehhc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEcCCCCEEEcc
Confidence 766 7889999999 5789898854 4579999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchh----hHHHHHHh-c
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI----LYYYLVVE-Q 400 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~----~~~~~~~~-~ 400 (455)
||+++....... ........||+.|+|||++.+ .++.++|||||||++|||++|..||...... ........ +
T Consensus 229 fG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~ 307 (392)
T PHA03207 229 FGAACKLDAHPD-TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQ 307 (392)
T ss_pred CccccccCcccc-cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhc
Confidence 999876544321 122235679999999997754 5788999999999999999999999764311 11111000 0
Q ss_pred ccc--hh--------hhcch----hhcCCC------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVP--VR--------EVLDK----EAGEWN------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~--~~--------~~~d~----~~~~~~------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ .+ ..+.. ....+. ....+..+.++|.+||..||++||++.+++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 308 VHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred cCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 000 00 00000 000000 1123445778999999999999999999976
No 211
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.3e-38 Score=303.89 Aligned_cols=245 Identities=24% Similarity=0.391 Sum_probs=191.4
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
++.+.||+|+||.||+|.+.+ ++.||+|.+..... . ...+.+|+.++.++ +|+||+++++++..
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------~--------~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 74 (272)
T cd06637 9 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------E--------EEEIKQEINMLKKYSHHRNIATYYGAFIK 74 (272)
T ss_pred hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc------c--------HHHHHHHHHHHHHhcCCCCeeeEeeEEee
Confidence 344889999999999999864 78999999864321 1 23477899999998 69999999997653
Q ss_pred -------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 251 -------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 251 -------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
...++||||+.+++|.+++.... ...+++..+..++.|++.||.|||+ ++++|+||||+||++++++.+|
T Consensus 75 ~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~--~~ivh~dl~~~nili~~~~~~~ 151 (272)
T cd06637 75 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVK 151 (272)
T ss_pred cCCCCCCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCCccCCCCHHHEEECCCCCEE
Confidence 35689999999999999987633 3468999999999999999999999 8999999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHH
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 397 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~ 397 (455)
|+|||++....... .......|+..|+|||++. ..++.++|+|||||++|||++|..||............
T Consensus 152 l~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~ 228 (272)
T cd06637 152 LVDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228 (272)
T ss_pred EccCCCceeccccc---ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 99999987543221 1123467899999999763 24677999999999999999999999765432222211
Q ss_pred HhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... . ........++..+.+|+.+||..+|.+||++.++++
T Consensus 229 ~~~--~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 229 PRN--P--------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred hcC--C--------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 110 0 011111234456889999999999999999999875
No 212
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.6e-38 Score=310.17 Aligned_cols=256 Identities=24% Similarity=0.310 Sum_probs=195.7
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++.+. ++..||+|.++.... . .....+.+|++++++++||||+++++++.+
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 70 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK------P------AIRNQIIRELKVLHECNSPYIVGFYGAFYS 70 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC------H------HHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence 445589999999999999976 478899998864321 1 013458899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. .+++|+||||+|||++.++.+||+|||+
T Consensus 71 ~~~~~lv~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (308)
T cd06615 71 DGEISICMEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGV 146 (308)
T ss_pred CCEEEEEeeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhh-CCEEECCCChHHEEEecCCcEEEccCCC
Confidence 8889999999999999999863 4689999999999999999999972 4799999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccch----
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV---- 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~---- 404 (455)
+...... ......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||...+...............
T Consensus 147 ~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 221 (308)
T cd06615 147 SGQLIDS-----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKE 221 (308)
T ss_pred ccccccc-----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccC
Confidence 8654322 1234578999999997754 57889999999999999999999997654222211111100000
Q ss_pred ------------------hhhcchhh----cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 405 ------------------REVLDKEA----GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 405 ------------------~~~~d~~~----~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
....+... ...+...++..+.+++.+|+..+|++||++.+|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 222 SHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 111112345568899999999999999999999864
No 213
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-38 Score=311.27 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=195.8
Q ss_pred cCCCcccccCCEEEEEEEEc--------CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceec
Q psy520 173 RRGNKLGEGQFGTVYYGKLK--------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.++++||+|+||.||+|+.. .+..||+|.++.... .. ....+.+|+.+++++ +||||++
T Consensus 15 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~------~~~~~~~E~~~l~~l~~h~~iv~ 82 (314)
T cd05099 15 VLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT------DK------DLADLISEMELMKLIGKHKNIIN 82 (314)
T ss_pred eeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC------hH------HHHHHHHHHHHHHhccCCCCeee
Confidence 45589999999999999752 245789998863221 00 134588999999999 6999999
Q ss_pred ccccccC-cceeEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCC
Q psy520 244 LLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 309 (455)
Q Consensus 244 l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Di 309 (455)
+++++.+ ...++||||+++|+|.+++..... ...+++.++..++.|++.||.|||+ +|++||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~dl 160 (314)
T cd05099 83 LLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES--RRCIHRDL 160 (314)
T ss_pred EEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH--CCeeeccc
Confidence 9998877 778999999999999999976421 2458999999999999999999999 89999999
Q ss_pred CCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q psy520 310 KSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDD 387 (455)
Q Consensus 310 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~ 387 (455)
||+|||++.++.+||+|||+++......... ......++..|+|||.+. +.++.++|||||||++|||++ |..||..
T Consensus 161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 161 AARNVLVTEDNVMKIADFGLARGVHDIDYYK-KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred cceeEEEcCCCcEEEcccccccccccccccc-ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999998654322111 112223456799999664 457889999999999999999 8999976
Q ss_pred CchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 388 NNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.............. . . ..+..++..+.+++.+|+..+|++||++.++++.|+++.
T Consensus 240 ~~~~~~~~~~~~~~-~-~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 240 IPVEELFKLLREGH-R-M---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred CCHHHHHHHHHcCC-C-C---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 54322222211110 0 0 011233445778999999999999999999999998875
No 214
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7.8e-38 Score=305.04 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=198.4
Q ss_pred cCCCCCCCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCccee
Q psy520 164 DGFNRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLL 242 (455)
Q Consensus 164 ~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 242 (455)
.++.....|++.++||.|+||.||+|.+.. ++.||+|.+..... . ....+.+|+.+++.++||||+
T Consensus 6 ~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~i~ 72 (292)
T cd06644 6 RDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSE------E-------ELEDYMVEIEILATCNHPYIV 72 (292)
T ss_pred cccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCH------H-------HHHHHHHHHHHHHhCCCCcEe
Confidence 345555667888999999999999999864 88999999864211 1 145588999999999999999
Q ss_pred cccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 243 RLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 243 ~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
++++.+.. ...++||||+++++|..++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nili~~~~~ 148 (292)
T cd06644 73 KLLGAFYWDGKLWIMIEFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHS--MKIIHRDLKAGNVLLTLDGD 148 (292)
T ss_pred eeEEEEEeCCeEEEEEecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhc--CCeeecCCCcceEEEcCCCC
Confidence 99997665 78899999999999988876543 368999999999999999999999 89999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccccC------CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHH
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~ 395 (455)
+||+|||++....... .......++..|+|||.+.+ .++.++|+|||||++|||++|..||...+......
T Consensus 149 ~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 225 (292)
T cd06644 149 IKLADFGVSAKNVKTL---QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 225 (292)
T ss_pred EEEccCccceeccccc---cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHH
Confidence 9999999876533221 11234568889999997632 35779999999999999999999997655322211
Q ss_pred HHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....... +.. ..+..++..+.++|.+||..+|++||++.++++
T Consensus 226 ~~~~~~~--~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 226 KIAKSEP--PTL-------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHhcCCC--ccC-------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1111100 000 011234455788999999999999999999975
No 215
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.6e-38 Score=302.53 Aligned_cols=254 Identities=28% Similarity=0.369 Sum_probs=195.8
Q ss_pred HHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC
Q psy520 159 LERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK 237 (455)
Q Consensus 159 l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 237 (455)
++.+++++... ..||+|+||.||+|.+. ++..||+|.+..... . ....+.+|+.++++++
T Consensus 3 ~~~~~~~~~~~------~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~ 63 (268)
T cd06624 3 YEYEYDENGER------VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS------R-------YVQPLHEEIALHSYLK 63 (268)
T ss_pred cccccccCCce------EEEecCCceEEEEeEecCCCcEEEEEEecCCCH------H-------HHHHHHHHHHHHHhcC
Confidence 44566777666 89999999999999976 478899998864321 1 1345889999999999
Q ss_pred CcceecccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcE
Q psy520 238 HVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPL--DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 314 (455)
Q Consensus 238 h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NI 314 (455)
|+||+++++++.. ...++|+||+++++|.+++..... ++ ++..+..++.|++.||.|||+ ++++||||||+||
T Consensus 64 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~--~~i~h~dl~p~ni 139 (268)
T cd06624 64 HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIIFYTKQILEGLKYLHD--NQIVHRDIKGDNV 139 (268)
T ss_pred CCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcc--cCCCcHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHE
Confidence 9999999998877 788999999999999999986432 34 888899999999999999999 8999999999999
Q ss_pred EECC-CCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHcCCCCCCCCch
Q psy520 315 LLDE-NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNT 390 (455)
Q Consensus 315 Ll~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~elltG~~p~~~~~~ 390 (455)
+++. ++.+||+|||++........ ......|+..|+|||.+.+ .++.++|+||||+++|+|++|..||.....
T Consensus 140 l~~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~ 216 (268)
T cd06624 140 LVNTYSGVVKISDFGTSKRLAGINP---CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE 216 (268)
T ss_pred EEcCCCCeEEEecchhheecccCCC---ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence 9986 67999999999876533221 1223468899999997743 267899999999999999999999976442
Q ss_pred hhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......... ... ....-+..++..+.+++.+|+..+|.+||++.+++.
T Consensus 217 ~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 217 PQAAMFKVG-------MFK--IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hhhhHhhhh-------hhc--cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 111110000 000 000011234455888999999999999999999875
No 216
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.8e-38 Score=318.54 Aligned_cols=254 Identities=22% Similarity=0.257 Sum_probs=189.8
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||++.+. .++.||||++....... .....+.+|+.+++.++||||+++++++.
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 86 (355)
T cd07874 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-----------THAKRAYRELVLMKCVNHKNIISLLNVFT 86 (355)
T ss_pred ceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-----------HHHHHHHHHHHHHHHhCCCchhceeeeee
Confidence 3456699999999999999876 38899999986432110 01345778999999999999999999664
Q ss_pred C-------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 250 N-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. ...++||||+. ++|.+.+.. .+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~--~givHrDikp~Nill~~~~~~ 158 (355)
T cd07874 87 PQKSLEEFQDVYLVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTL 158 (355)
T ss_pred ccccccccceeEEEhhhhc-ccHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHHEEECCCCCE
Confidence 3 34689999995 567777654 48899999999999999999999 899999999999999999999
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-c
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......... -
T Consensus 159 kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (355)
T cd07874 159 KILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234 (355)
T ss_pred EEeeCcccccCCCcc----ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 999999998654321 1234578999999997755 578899999999999999999999987653222111111 0
Q ss_pred ccc-----------hhhhcchh---------------hc---CCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVP-----------VREVLDKE---------------AG---EWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~-----------~~~~~d~~---------------~~---~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ ...+.+.. .. ..........+.+||.+|+..||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred CCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 000 00000000 00 0001123456789999999999999999999987
No 217
>KOG0033|consensus
Probab=100.00 E-value=2.6e-40 Score=297.77 Aligned_cols=248 Identities=24% Similarity=0.387 Sum_probs=201.2
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|.|+.||++... +|+.+|+|.++....... + .+.+.+|+.|.+.++||||+++.....+
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~----~-------~e~l~rEarIC~~LqHP~IvrL~~ti~~ 81 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR----D-------FQKLEREARICRKLQHPNIVRLHDSIQE 81 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc----c-------HHHHHHHHHHHHhcCCCcEeehhhhhcc
Confidence 344478999999999999876 489999999876544222 1 4458899999999999999999996555
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC---CCCceEEcc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGD 326 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~---~~~~~kl~D 326 (455)
+..++|+|+|.|++|..-+-.. ..+++..+...++||+.+|.|+|. ++|||||+||.|+|+. ...-+||+|
T Consensus 82 ~~~~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~--n~IvHRDvkP~nllLASK~~~A~vKL~~ 156 (355)
T KOG0033|consen 82 ESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHS--NGIVHRDLKPENLLLASKAKGAAVKLAD 156 (355)
T ss_pred cceeEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeeeeccCCCceeecc
Confidence 8889999999999998776552 458888999999999999999999 8999999999999995 345799999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
||+|....... ..-...|||.|||||++.. .++..+||||.|||||-+|.|.+||.+.+....+..+..+...+.
T Consensus 157 FGvAi~l~~g~----~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~ 232 (355)
T KOG0033|consen 157 FGLAIEVNDGE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP 232 (355)
T ss_pred cceEEEeCCcc----ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC
Confidence 99998776332 2346789999999997754 678999999999999999999999999776666655554433322
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...| +.+....++|+.+|+..||.+|.|+.|.++
T Consensus 233 ------~~~w--~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 233 ------SPEW--DTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ------Cccc--CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 1122 245566899999999999999999998764
No 218
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.4e-38 Score=306.19 Aligned_cols=247 Identities=27% Similarity=0.435 Sum_probs=195.9
Q ss_pred CCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|++.+.||+|+||.||+|... ++..||+|.+..... .. ...+.+|+.+++.++||||+++++++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~------~~-------~~~~~~e~~~l~~~~h~~v~~~~~~~ 86 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ------PK-------KELIINEILVMRENKNPNIVNYLDSY 86 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc------ch-------HHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34566689999999999999875 488999999864322 11 34488999999999999999999977
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.. ...|+||||+++++|.+++.. ..+++.++..++.|++.||.|||+ .|++||||||+||+++.++.+||+||
T Consensus 87 ~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~--~gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 87 LVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred EeCCEEEEeecccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEcCCCCEEECcc
Confidence 66 788999999999999999864 358999999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|++....... .......|++.|+|||.+.+ ..+.++|+|||||++|+|++|..||.................+ .
T Consensus 161 g~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~ 235 (296)
T cd06654 161 GFCAQITPEQ---SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP--E 235 (296)
T ss_pred ccchhccccc---cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCC--C
Confidence 9987543321 11223578899999997654 5788999999999999999999999766532211111111100 0
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+..++..+.+++.+||..+|++||++.++++
T Consensus 236 -------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 236 -------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred -------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 0012235566889999999999999999999986
No 219
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.8e-38 Score=299.99 Aligned_cols=247 Identities=25% Similarity=0.431 Sum_probs=194.8
Q ss_pred cCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
++.+.||+|+||.||+|.+.++..+|+|.+..... . ...|.+|+++++++.|||++++++++.. .
T Consensus 7 ~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~------~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (256)
T cd05112 7 TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM------S--------EEDFIEEAQVMMKLSHPKLVQLYGVCTERS 72 (256)
T ss_pred EEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC------C--------HHHHHHHHHHHHhCCCCCeeeEEEEEccCC
Confidence 34588999999999999987778999999864321 0 2348899999999999999999998776 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++.... .++++..+..++.+++.|+.|||+ .+++|+||||+||+++.++.+||+|||+++
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 73 PICLVFEFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLES--SNVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred ceEEEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccccceEEEcCCCeEEECCCccee
Confidence 8899999999999999987643 368899999999999999999999 889999999999999999999999999987
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||.+. +.++.++|+||||+++|||++ |..||................
T Consensus 149 ~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-------- 218 (256)
T cd05112 149 FVLDDQYT--SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF-------- 218 (256)
T ss_pred ecccCccc--ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC--------
Confidence 65432211 112234567899999664 567889999999999999998 999998655332222111110
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
....+...+..+.+|+.+|+..+|++||++.+|++.|.
T Consensus 219 ---~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 219 ---RLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 00111123456888999999999999999999998873
No 220
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.5e-38 Score=312.10 Aligned_cols=258 Identities=19% Similarity=0.246 Sum_probs=191.3
Q ss_pred CCCccccc--CCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 174 RGNKLGEG--QFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 174 ~~~~LG~G--~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
+.++||+| +||+||++..+ +|+.||||+++..... . .....+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-----~------~~~~~~~~e~~~l~~l~hpniv~~~~~~~~ 70 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-----N------EMVTFLQGELHVSKLFNHPNIVPYRATFIA 70 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-----H------HHHHHHHHHHHHHHhcCCCCeeeEEEEEEE
Confidence 34789999 78999999886 4899999998643220 0 113457789999999999999999998876
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+ ++++||||||+|||++.++.++++||+.
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~--~~iiH~dlkp~Nil~~~~~~~~l~~~~~ 147 (327)
T cd08227 71 DNELWVVTSFMAYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHH--MGYVHRSVKASHILISVDGKVYLSGLRS 147 (327)
T ss_pred CCEEEEEEeccCCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCChhhEEEecCCcEEEcccch
Confidence 78899999999999999987543 2358999999999999999999999 8899999999999999999999999986
Q ss_pred cccccCCCcc----cceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc
Q psy520 330 VKMSETSNMK----TMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 330 a~~~~~~~~~----~~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+......... ........++..|+|||++.+ .++.++|||||||++|||++|..||...............
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-- 225 (327)
T cd08227 148 NLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG-- 225 (327)
T ss_pred hhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcC--
Confidence 5433211100 011123456788999997754 4788999999999999999999999865422211111100
Q ss_pred chhhhcc-------------------hhh-----------------cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHH
Q psy520 403 PVREVLD-------------------KEA-----------------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 403 ~~~~~~d-------------------~~~-----------------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
.++..++ ... .......++..+.+|+.+|+..||++|||+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell 305 (327)
T cd08227 226 TVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLL 305 (327)
T ss_pred CccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHh
Confidence 0000000 000 0001123455788999999999999999999998
Q ss_pred H
Q psy520 447 D 447 (455)
Q Consensus 447 ~ 447 (455)
+
T Consensus 306 ~ 306 (327)
T cd08227 306 N 306 (327)
T ss_pred c
Confidence 6
No 221
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.3e-38 Score=301.24 Aligned_cols=237 Identities=24% Similarity=0.391 Sum_probs=183.3
Q ss_pred CcccccCCEEEEEEEEcC-------------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCccee
Q psy520 176 NKLGEGQFGTVYYGKLKN-------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLL 242 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 242 (455)
+.||+|+||.||+|++.. ...||+|.+..... . ....|..|+.+++.++||||+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~------~-------~~~~~~~~~~~l~~l~hp~iv 67 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR------D-------ISLAFFETASMMRQVSHKHIV 67 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh------h-------HHHHHHHHHHHHHhCCCCCEe
Confidence 368999999999998532 23588888753211 1 134588899999999999999
Q ss_pred cccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 243 RLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 243 ~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
++++++.+ ...++||||+++|+|..++.... .++++..+..++.|++.||+|||+ ++|+||||||+|||++.++.
T Consensus 68 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~ 143 (262)
T cd05077 68 LLYGVCVRDVENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLED--KDLVHGNVCTKNILLAREGI 143 (262)
T ss_pred eEEEEEecCCCCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhh--CCeECCCCCcccEEEecCCc
Confidence 99998877 77899999999999988876532 468999999999999999999999 89999999999999987664
Q ss_pred -------eEEccccccccccCCCcccceeccCCCCCCcCCccccc--CCCCChhhHHHHHHHHHHHH-cCCCCCCCCchh
Q psy520 322 -------PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELL-TGMKPIDDNNTI 391 (455)
Q Consensus 322 -------~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~s~~sDi~SlGvvl~ell-tG~~p~~~~~~~ 391 (455)
+|++|||++...... ....|+..|+|||.+. +.++.++|||||||++|||+ +|..||......
T Consensus 144 ~~~~~~~~~l~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~ 216 (262)
T cd05077 144 DGECGPFIKLSDPGIPITVLSR-------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA 216 (262)
T ss_pred cCCCCceeEeCCCCCCccccCc-------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh
Confidence 899999987654321 2346788999999764 35788999999999999998 588888765422
Q ss_pred hHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q psy520 392 LYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 392 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
...... ..... . .......+.+|+.+||..||++||++.++++.|
T Consensus 217 ~~~~~~-~~~~~---~---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 217 EKERFY-EGQCM---L---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHH-hcCcc---C---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 211110 01000 0 011234578899999999999999999999876
No 222
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.3e-38 Score=304.51 Aligned_cols=247 Identities=25% Similarity=0.398 Sum_probs=194.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.+.. +..+|+|.+..... . ....+.+|+++++.++||||+++++++..
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~ii~~~~~~~~ 73 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE------E-------ELEDYMVEIDILASCDHPNIVKLLDAFYY 73 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH------H-------HHHHHHHHHHHHHHCCCCCeeeEEEEEee
Confidence 4555889999999999999874 77889998853211 1 14458899999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|..++.... .++++..+..++.|++.||.|||+ .|++||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~~~v~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~--~~i~H~dlkp~nili~~~~~~kl~dfg~ 149 (282)
T cd06643 74 ENNLWILIEFCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHE--NKIIHRDLKAGNILFTLDGDIKLADFGV 149 (282)
T ss_pred CCEEEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCcccEEEccCCCEEEccccc
Confidence 78899999999999998876532 468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+....... .......|+..|+|||++. ..++.++|+|||||++|||++|.+||..................
T Consensus 150 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd06643 150 SAKNTRTI---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP 226 (282)
T ss_pred cccccccc---cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC
Confidence 87543221 1123457899999999763 23577999999999999999999999865533222222111100
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ..+..++..+.++|.+||..+|.+||++.++++
T Consensus 227 --~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 227 --TL-------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --CC-------CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 011234556889999999999999999999875
No 223
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-38 Score=328.14 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=188.6
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||++.+.. ++.||||... ...+.+|++++++++|+||+++++++..
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------------------~~~~~~E~~iL~~L~HpnIv~l~~~~~~ 231 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------------------YASSVHEARLLRRLSHPAVLALLDVRVV 231 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------------------ccCHHHHHHHHHHCCCCCCCcEEEEEEE
Confidence 5667899999999999999875 7889999642 1126689999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||+++ .++|.+++.... ..+++.+++.|+.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 232 ~~~~~lv~e~~-~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~--~gIvHrDLKP~NILl~~~~~vkL~DFGl 306 (461)
T PHA03211 232 GGLTCLVLPKY-RSDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHG--EGIIHRDIKTENVLVNGPEDICLGDFGA 306 (461)
T ss_pred CCEEEEEEEcc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEEECcCCHHHEEECCCCCEEEcccCC
Confidence 7889999999 578998887532 369999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCc--------hhhHHHHHHhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNN--------TILYYYLVVEQ 400 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~--------~~~~~~~~~~~ 400 (455)
++...... .........||..|+|||++.+ .++.++|||||||++|||++|..|+.... .......+...
T Consensus 307 a~~~~~~~-~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~ 385 (461)
T PHA03211 307 ACFARGSW-STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQA 385 (461)
T ss_pred ceeccccc-ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhh
Confidence 98654322 1112234679999999997654 57889999999999999999876653221 01111111111
Q ss_pred ccc---hhhhc--------chh-----h-----cCCCh-hHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 401 EVP---VREVL--------DKE-----A-----GEWNE-THVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 401 ~~~---~~~~~--------d~~-----~-----~~~~~-~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
... +.... ... . ..|.. ......+.+||.+||..||++|||+.|+++.
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 386 QVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred ccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 100 00000 000 0 00100 1223467889999999999999999999863
No 224
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=8.1e-38 Score=301.25 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=184.8
Q ss_pred cccccCCEEEEEEEEcCCc---EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cc
Q psy520 177 KLGEGQFGTVYYGKLKNGM---EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~---~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.||+|+||.||+|...++. .+++|.++.... . .....|.+|+.+++.++||||+++++.+.+ ..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 69 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS------S------KEQNEFLQQGDPYRILQHPNILQCLGQCVEAIP 69 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC------h------HHHHHHHHHHHHHhccCCcchhheEEEecCCCc
Confidence 5999999999999865433 455666543221 0 014568999999999999999999998877 77
Q ss_pred eeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.|+||||+++|+|.+++..... ...+++..+..++.|++.||+|||+ .+++||||||+|||++.++.+||+|||++.
T Consensus 70 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nil~~~~~~~~l~Dfg~~~ 147 (268)
T cd05086 70 YLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK--HNFLHSDLALRNCFLTSDLTVKVGDYGIGP 147 (268)
T ss_pred cEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--CCeeccCCccceEEEcCCccEEeccccccc
Confidence 8999999999999999986432 2456777888999999999999999 889999999999999999999999999876
Q ss_pred cccCCCcccceeccCCCCCCcCCcccccC--------CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhccc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMHC--------QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 402 (455)
...... .........|+..|+|||++.. ..+.++|||||||++|||++ |..||..............+.
T Consensus 148 ~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~- 225 (268)
T cd05086 148 SRYKED-YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ- 225 (268)
T ss_pred ccCcch-hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc-
Confidence 432211 1111234578899999997632 24678999999999999997 677887655322222111111
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
.....++... ..++..+.+++..|+ .+|++||++++|++.|.
T Consensus 226 -~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 226 -QVKLFKPQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -ccccCCCccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1111121111 123445677787787 67999999999998873
No 225
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.4e-38 Score=313.85 Aligned_cols=257 Identities=27% Similarity=0.409 Sum_probs=198.1
Q ss_pred CcCCCcccccCCEEEEEEEEcC--------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCccee
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN--------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLL 242 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 242 (455)
|.+++.||+|+||.||++.+.. +..||+|.++.... . .....+.+|+.+++++ +||||+
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l~~l~~h~~iv 81 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT------D------KDLSDLVSEMEMMKMIGKHKNII 81 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC------H------HHHHHHHHHHHHHHhhcCCCCee
Confidence 4667999999999999997531 23689998864221 1 0144588999999999 799999
Q ss_pred cccccccC-cceeEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecC
Q psy520 243 RLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRD 308 (455)
Q Consensus 243 ~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~D 308 (455)
++++++.. ...+++|||+++|+|.+++..... ...+++.++..++.|++.||.|||+ +|++|||
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~givH~d 159 (334)
T cd05100 82 NLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS--QKCIHRD 159 (334)
T ss_pred eeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCeeccc
Confidence 99998877 778999999999999999976321 2357889999999999999999999 8999999
Q ss_pred CCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCC
Q psy520 309 VKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPID 386 (455)
Q Consensus 309 ikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~ 386 (455)
|||+|||++.++.+||+|||+++....... ........++..|+|||++. ..++.++|||||||++|||++ |..||.
T Consensus 160 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 160 LAARNVLVTEDNVMKIADFGLARDVHNIDY-YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred cccceEEEcCCCcEEECCcccceecccccc-cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999876543221 11122234456799999664 467889999999999999998 899998
Q ss_pred CCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 387 DNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
............... . ...+..++..+.+++.+|+..+|++||++.++++.|++++.
T Consensus 239 ~~~~~~~~~~~~~~~-~----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 239 GIPVEELFKLLKEGH-R----------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred CCCHHHHHHHHHcCC-C----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 765333222221110 0 00112234457889999999999999999999999998763
No 226
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.2e-38 Score=298.37 Aligned_cols=248 Identities=26% Similarity=0.344 Sum_probs=196.3
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++..+. ++.||+|++....... .....+.+|++++++++|+|++++++.+..
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-----------RERKAAEQEAQLLSQLKHPNIVAYRESWEG 70 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH-----------HHHHHHHHHHHHHHhCCCCCeeeeeeeecC
Confidence 5667899999999999999764 7899999986432210 013457899999999999999999987653
Q ss_pred --cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...+++|||+++++|.+++.... ..++++.++..++.+++.|+.|||+ .|++||||||+||+++.++.++|+|||
T Consensus 71 ~~~~~~lv~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~--~~i~H~di~p~nil~~~~~~~~l~df~ 147 (257)
T cd08223 71 EDGLLYIVMGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHE--KHILHRDLKTQNVFLTRTNIIKVGDLG 147 (257)
T ss_pred CCCEEEEEecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCchhEEEecCCcEEEeccc
Confidence 46789999999999999997632 3468999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... .......|++.|+|||.+. +.++.++|+||||+++|+|++|..||...+............. .
T Consensus 148 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--~-- 220 (257)
T cd08223 148 IARVLENQC---DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL--P-- 220 (257)
T ss_pred ceEEecccC---CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--C--
Confidence 988664322 1223457899999999664 4578899999999999999999999986553322222111111 0
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....++..+.+++.+|+..+|++||++.++++
T Consensus 221 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 -------PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -------CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 011235566889999999999999999999875
No 227
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.2e-37 Score=296.91 Aligned_cols=249 Identities=26% Similarity=0.371 Sum_probs=197.1
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||+|+||.||+|..+ +++.||+|.+......... ......+.+|++++++++|+||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~--------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 73 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTG--------QEAVKQLEQEIALLSKLQHPNIVQYLGTERE 73 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccc--------hHHHHHHHHHHHHHHhcCCCCchheeeeEec
Confidence 455689999999999999987 5899999998654321111 1114568899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++++||+++++|.+++.. ..++++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~~~ni~~~~~~~~kl~d~~~ 148 (258)
T cd06632 74 EDNLYIFLELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHD--RNTVHRDIKGANILVDTNGVVKLADFGM 148 (258)
T ss_pred CCeEEEEEEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccCcc
Confidence 788999999999999999986 3468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-C-CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-Q-ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~-~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+....... ......|+..|+|||.+.. . ++.++|+||||+++|+|++|..||.............. .....
T Consensus 149 ~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~-- 221 (258)
T cd06632 149 AKQVVEFS----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR-SKELP-- 221 (258)
T ss_pred ceeccccc----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh-cccCC--
Confidence 87654332 1234578899999996643 4 78899999999999999999999987653222221111 00110
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+..++..+.+++.+||..+|.+||++.+++.
T Consensus 222 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 -------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 011234456788999999999999999999875
No 228
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.2e-38 Score=314.98 Aligned_cols=253 Identities=22% Similarity=0.282 Sum_probs=193.1
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||+||+++++. ++.||+|++.+.... .......+.+|+.++..++|+||+.+++++.+
T Consensus 3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----------~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~ 72 (331)
T cd05624 3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML----------KRAETACFREERNVLVNGDCQWITTLHYAFQD 72 (331)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH----------hhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 5666899999999999999874 788999998643210 01113457889999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||||++||+|.+++.... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~--~~iiHrDlkp~Nill~~~~~~kl~DfG~ 148 (331)
T cd05624 73 ENYLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQ--LHYVHRDIKPDNVLLDMNGHIRLADFGS 148 (331)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCchHHEEEcCCCCEEEEeccc
Confidence 78899999999999999998643 368999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+....... ........||+.|+|||++. +.++.++|+|||||++|||++|..||...........+......
T Consensus 149 a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~ 226 (331)
T cd05624 149 CLKMNQDG--TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER 226 (331)
T ss_pred eeeccCCC--ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCc
Confidence 87654332 11223457999999999775 34678999999999999999999999876543322222211111
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCC--CCCHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDK--RASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~--RPs~~evl~ 447 (455)
+. +.. ....++..+.++|.+|+..++++ |++++++++
T Consensus 227 ~~--~p~-----~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 227 FQ--FPS-----HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cc--CCC-----ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 00 000 01123456788888888766443 568887764
No 229
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.5e-38 Score=303.54 Aligned_cols=250 Identities=23% Similarity=0.322 Sum_probs=194.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.++ +++.||+|.++.... . .....+.+|+.++++++||||+++++++..
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 70 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD------E------SKFNQIIMELDILHKAVSPYIVDFYGAFFI 70 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC------H------HHHHHHHHHHHHHHhcCCCcHHhhhhheec
Confidence 456689999999999999987 589999999864211 0 013458899999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|..++........+++..+..++.+++.||.|||+. .+++||||||+||+++.++.+||+|||+
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~ 149 (286)
T cd06622 71 EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE-HNIIHRDVKPTNVLVNGNGQVKLCDFGV 149 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc-CCEeeCCCCHHHEEECCCCCEEEeecCC
Confidence 88899999999999998887643334789999999999999999999962 4899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccCC-------CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-------ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+....... .....|+..|+|||.+.+. ++.++|+|||||++|+|++|..||.............
T Consensus 150 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~---- 220 (286)
T cd06622 150 SGNLVASL-----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLS---- 220 (286)
T ss_pred cccccCCc-----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHH----
Confidence 87543221 2334688899999976432 3779999999999999999999997654222111111
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+...... +..++..+.++|.+|+..+|.+||++.++++
T Consensus 221 ---~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 221 ---AIVDGDPPTL-PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ---HHhhcCCCCC-CcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 0001000111 1235666889999999999999999999986
No 230
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.9e-38 Score=298.27 Aligned_cols=237 Identities=27% Similarity=0.403 Sum_probs=186.1
Q ss_pred CcccccCCEEEEEEEEcCCc-----------EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecc
Q psy520 176 NKLGEGQFGTVYYGKLKNGM-----------EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~-----------~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
+.||+|+||.||+|.+.+.. .|++|.+...... ...|.+|+.++++++||||+++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--------------~~~~~~e~~~l~~l~h~~i~~~ 66 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--------------SLAFFETASLMSQLSHKHLVKL 66 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--------------HHHHHHHHHHHHcCCCcchhhe
Confidence 36999999999999987422 4778876533210 3458899999999999999999
Q ss_pred cccccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC----
Q psy520 245 LGFCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF---- 320 (455)
Q Consensus 245 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~---- 320 (455)
++++.....++||||+++|+|.+++..... .+++..+..++.|++.||+|||+ ++++||||||+||+++.++
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dlkp~Nill~~~~~~~~ 142 (259)
T cd05037 67 YGVCVRDENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLED--KKLVHGNVCGKNILVARYGLNEG 142 (259)
T ss_pred eeEEecCCcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhh--CCeecccCccceEEEecCccccC
Confidence 998776778999999999999999987432 68999999999999999999999 8999999999999999888
Q ss_pred ---ceEEccccccccccCCCcccceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhH
Q psy520 321 ---VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLT-GMKPIDDNNTILY 393 (455)
Q Consensus 321 ---~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~ 393 (455)
.+||+|||++..... .....++..|+|||++.+ .++.++|+|||||++|||++ |..||...+....
T Consensus 143 ~~~~~kl~Dfg~a~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~ 215 (259)
T cd05037 143 YVPFIKLSDPGIPITVLS-------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK 215 (259)
T ss_pred CceeEEeCCCCccccccc-------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH
Confidence 799999999876433 123456778999998754 46889999999999999999 5888876542211
Q ss_pred HHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 394 YYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 394 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..... .... .+. .....+.+++.+||..+|.+||++.+|++.|+
T Consensus 216 ~~~~~-~~~~-----------~~~-~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 216 ERFYQ-DQHR-----------LPM-PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHh-cCCC-----------CCC-CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111 0000 000 00145788999999999999999999998873
No 231
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.3e-38 Score=305.59 Aligned_cols=255 Identities=24% Similarity=0.314 Sum_probs=195.3
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||+||++.+. +++.||+|++..... . .....+.+|+++++.++||||+++++++.+
T Consensus 8 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 75 (284)
T cd06620 8 ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK------S------SVRKQILRELQIMHECRSPYIVSFYGAFLNE 75 (284)
T ss_pred HHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc------c------hHHHHHHHHHHHHHHcCCCCcceEeeeEecC
Confidence 44588999999999999976 488999999864321 0 114568899999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.. ..++++..+..++.+++.||.|||+. ++++||||||+||+++.++.++|+|||++
T Consensus 76 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 76 NNICMCMEFMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNV-HRIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred CEEEEEEecCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHh-cCeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 788999999999999998876 34689999999999999999999962 47999999999999999999999999997
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc-ccchhhhc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 408 (455)
....... .....|+..|+|||++ .+.++.++|+|||||++|+++||..||............... ........
T Consensus 152 ~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd06620 152 GELINSI-----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV 226 (284)
T ss_pred cchhhhc-----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh
Confidence 6542221 2345789999999965 456788999999999999999999999865421000000000 00000111
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.......+...++..+.+|+.+|+..||.+||++.||++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 227 QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1111111222355668899999999999999999999874
No 232
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=7.1e-38 Score=302.95 Aligned_cols=237 Identities=25% Similarity=0.384 Sum_probs=182.6
Q ss_pred cccccCCEEEEEEEEcC-------------------------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHH
Q psy520 177 KLGEGQFGTVYYGKLKN-------------------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ 231 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~-------------------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 231 (455)
+||+|+||.||+|.+.. ...||+|++..... .....|.+|+.
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-------------~~~~~~~~~~~ 68 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-------------DIALAFFETAS 68 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-------------HHHHHHHHHHH
Confidence 69999999999997521 23588888753211 11345888999
Q ss_pred HHHcCCCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCC
Q psy520 232 TLSQCKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 310 (455)
Q Consensus 232 ~l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dik 310 (455)
+++.++||||+++++++.+ ...++||||+++|+|..++... ...+++..+..++.|++.||+|||+ ++++|||||
T Consensus 69 ~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlk 144 (274)
T cd05076 69 LMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLED--KNLVHGNVC 144 (274)
T ss_pred HHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHc--CCccCCCCC
Confidence 9999999999999999877 7889999999999999988653 2468899999999999999999999 899999999
Q ss_pred CCcEEECCCC-------ceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHH-c
Q psy520 311 SANVLLDENF-------VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELL-T 380 (455)
Q Consensus 311 p~NILl~~~~-------~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~ell-t 380 (455)
|+|||++..+ .+|++|||++...... ....++..|+|||.+.+ .++.++|||||||++|||+ +
T Consensus 145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~ 217 (274)
T cd05076 145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD 217 (274)
T ss_pred cccEEEeccCcccCccceeeecCCccccccccc-------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 9999997654 4899999987543221 12357888999997743 4688999999999999994 7
Q ss_pred CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 381 GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 381 G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
|..||............. .....+ ......+.++|.+||..+|.+||++.+|++.|+
T Consensus 218 g~~p~~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 218 GEVPLKERTPSEKERFYE-KKHRLP------------EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred CCCCccccChHHHHHHHH-hccCCC------------CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 999997654322111111 111100 011234778899999999999999999998873
No 233
>KOG1094|consensus
Probab=100.00 E-value=7.4e-39 Score=317.83 Aligned_cols=263 Identities=26% Similarity=0.361 Sum_probs=207.4
Q ss_pred cCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
.+.++||+|-||.|.++....+..||||+++..+.. .....|..|+++|.+|+||||+.++|.|.. +
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~------------~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De 608 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK------------NARNDFLKEIKILSRLKHPNIVELLGVCVQDD 608 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCcccch------------hHHHHHHHHHHHHhccCCCCeeEEEeeeecCC
Confidence 567999999999999999987799999999865431 125679999999999999999999999876 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.+|+++|||++|+|.+++..+.- +.+.-....+|+.||+.|++||.+ -++|||||.+.|+|+|.++++||+|||++|
T Consensus 609 PicmI~EYmEnGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes--~nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLES--LNFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHh--hchhhccccccceeecCcccEEecCccccc
Confidence 88999999999999999998643 234566777899999999999999 679999999999999999999999999999
Q ss_pred cccCCCcccceeccCCCCCCcCCcc-cccCCCCChhhHHHHHHHHHHHHc--CCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLT--GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE-~~~~~~s~~sDi~SlGvvl~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
-........ .....+-...||||| ++.|+++++||+|+||+++||+++ ...||.............. +...-
T Consensus 686 ~lysg~yy~-vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~----~~~~~ 760 (807)
T KOG1094|consen 686 NLYSGDYYR-VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGE----FFRDQ 760 (807)
T ss_pred ccccCCcee-eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhh----hcCCC
Confidence 665544322 122345567899999 778999999999999999999877 7889987653322221111 00000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhcC
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
....-...+.-++..+.+++..||..+.++||+++++...|++...|
T Consensus 761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~~~ 807 (807)
T KOG1094|consen 761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDALN 807 (807)
T ss_pred CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhccC
Confidence 00111122344556677889999999999999999999999876543
No 234
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.5e-38 Score=304.80 Aligned_cols=247 Identities=24% Similarity=0.308 Sum_probs=188.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
+++.+.||+|+||.||+|.+. +++.||+|.+..... .. ....|.+|+.++++++||||+++++++..
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 70 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT------VE------LQKQIMSELEILYKCDSPYIIGFYGAFFV 70 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC------hH------HHHHHHHHHHHHHhCCCCCeeeEEEEEEE
Confidence 345588999999999999875 488999999864321 10 13458899999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|..+. .+++..+..++.|++.||.|||+ .|++|+||||+||+++.++.+||+|||+
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nill~~~~~~~l~dfg~ 141 (279)
T cd06619 71 ENRISICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS--LKILHRDVKPSNMLVNTRGQVKLCDFGV 141 (279)
T ss_pred CCEEEEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH--CCEeeCCCCHHHEEECCCCCEEEeeCCc
Confidence 7889999999999996542 47888999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... .....||..|+|||.+. ..++.++|+||||+++|+|++|..||.............. ......
T Consensus 142 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~ 213 (279)
T cd06619 142 STQLVNSI-----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQ---LLQCIV 213 (279)
T ss_pred ceeccccc-----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHH---HHHHHh
Confidence 87553321 23457899999999764 4578899999999999999999999975321100000000 000000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+......+....+..+.+++.+|+..+|++||+++++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 214 DEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred ccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 011111112234456889999999999999999999875
No 235
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.1e-38 Score=305.61 Aligned_cols=243 Identities=28% Similarity=0.374 Sum_probs=195.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||++.+.. ++.||+|++....... ......+.+|+++++++.||||+++++++.+
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 72 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----------LKQVEHVLNEKRILQSIRHPFLVNLYGSFQD 72 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCCccceeeEEEc
Confidence 4556899999999999999864 8999999986432211 1114558899999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 73 ~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~--~~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 73 DSNLYLVMEYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHS--LDIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred CCeEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 7889999999999999999873 468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+...... .....|++.|+|||.+. +..+.++|+||||+++|+|++|..||..................++
T Consensus 148 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--- 218 (290)
T cd05580 148 AKRVKGR------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP--- 218 (290)
T ss_pred ccccCCC------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC---
Confidence 8765433 23457899999999664 4568899999999999999999999987653322222221111111
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
...+..+.++|.+|+..+|.+|+ +++++++
T Consensus 219 ---------~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 219 ---------SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---------ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 12245578899999999999998 7777653
No 236
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-38 Score=316.15 Aligned_cols=186 Identities=25% Similarity=0.376 Sum_probs=156.6
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.... ++.||+|+.... ....|+.++++++||||+++++++..
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------------------~~~~E~~~l~~l~h~~iv~~~~~~~~ 128 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------------------TTLIEAMLLQNVNHPSVIRMKDTLVS 128 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------------------ccHHHHHHHHhCCCCCCcChhheEEe
Confidence 5666999999999999999874 678999975321 13469999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+|+||+ .++|.+++... ..++++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 129 ~~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 129 GAITCMVLPHY-SSDLYTYLTKR--SRPLPIDQALIIEKQILEGLRYLHA--QRIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred CCeeEEEEEcc-CCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEecCcc
Confidence 7789999999 57898888653 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCC
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 385 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~ 385 (455)
++...... ......||..|+|||++. +.++.++|||||||++|||+++..|+
T Consensus 204 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 204 AQFPVVAP----AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccCc----ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 87543221 123457999999999764 46789999999999999999865554
No 237
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1e-37 Score=302.40 Aligned_cols=257 Identities=22% Similarity=0.334 Sum_probs=194.3
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++...||+|+||.||+|.++ +|+.||+|++........ ..+.+.+|+.++++++|||++++++++.+
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 71 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-----------IKKIALREIRMLKQLKHPNLVNLIEVFRR 71 (286)
T ss_pred eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-----------ccHHHHHHHHHHHhCCCCCEeeeeeEEee
Confidence 556689999999999999987 489999999864322111 12347899999999999999999998876
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|..++.. ...+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 72 ~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 72 KRKLHLVFEYCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHK--HNCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred CCEEEEEEeccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCChhhEEEcCCCcEEECcccc
Confidence 788999999999888777654 3358999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc-ccchh-
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVR- 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~- 405 (455)
+........ ......++..|+|||.+.+ .++.++|+||||+++|||++|..||.+............. .....
T Consensus 147 ~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T cd07847 147 ARILTGPGD---DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPR 223 (286)
T ss_pred ceecCCCcc---cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 886544321 1223467889999997644 4688999999999999999999999866532222111110 00000
Q ss_pred --hhcch----------hhcCC-----ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 --EVLDK----------EAGEW-----NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 --~~~d~----------~~~~~-----~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+. ..... ....++..+.+|+.+|+..+|++||++.|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 224 HQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000 00000 01123566889999999999999999999874
No 238
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.4e-37 Score=299.59 Aligned_cols=261 Identities=26% Similarity=0.430 Sum_probs=198.3
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|... +|+.||||.++........... ......+.+.+|+.++++++|||++++++++..
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 79 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDS---RQKDMVKALRSEIETLKDLDHLNIVQYLGFETT 79 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccch---HHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc
Confidence 456689999999999999875 4889999998643321111101 111124568899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++... .++++..+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHS--KGILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhh--CCeeecCCChhhEEEcCCCeEEEeeccc
Confidence 7889999999999999999874 468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++...... .........|+..|+|||.+.+ .++.++|+||||+++|++++|..||................ ...
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~ 231 (272)
T cd06629 155 SKKSDDIY-DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR--SAP 231 (272)
T ss_pred cccccccc-cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc--cCC
Confidence 87644321 1111234568899999997643 26889999999999999999999997654332211111110 000
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.. .....++..+.+++.+||..+|.+||++++|++
T Consensus 232 ~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 232 PIPP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 0000 011234567889999999999999999999875
No 239
>KOG4250|consensus
Probab=100.00 E-value=1.3e-38 Score=323.85 Aligned_cols=265 Identities=25% Similarity=0.391 Sum_probs=204.5
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
...+.||+||||.||+|+.+ +|+.||||.++..... ...+.+.+|+++|++++|+|||++++.-.+
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~------------r~~e~~~~EieilkKLnh~NIVk~f~iee~~ 83 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL------------RPRERWCREIEILKKLNHPNIVKLFDIEETK 83 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhccc------------chHHHHHHHHHHHHHcCchhhhhhcccCCcc
Confidence 34478999999999999965 5999999999865421 125668999999999999999999986544
Q ss_pred ------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC--CCC--
Q psy520 251 ------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD--ENF-- 320 (455)
Q Consensus 251 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~--~~~-- 320 (455)
....+|||||.||||...|.+-++...|++.+.+.++..+..||.|||+ +||+||||||.||++- .+|
T Consensus 84 ~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE--n~IvHRDlKP~NIvl~~Gedgq~ 161 (732)
T KOG4250|consen 84 FLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE--NGIVHRDLKPGNIVLQIGEDGQS 161 (732)
T ss_pred ccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH--cCceeccCCCCcEEEeecCCCce
Confidence 3457899999999999999988888889999999999999999999999 8999999999999994 333
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCccccc--CCCCChhhHHHHHHHHHHHHcCCCCCCCCchh-----hH
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTI-----LY 393 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~-----~~ 393 (455)
..||+|||.|+....+. .-..+.||..|++||++. +.++.-+|.|||||++|+++||..||...... ..
T Consensus 162 IyKLtDfG~Arel~d~s----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~ 237 (732)
T KOG4250|consen 162 IYKLTDFGAARELDDNS----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIM 237 (732)
T ss_pred EEeeecccccccCCCCC----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhh
Confidence 67999999999877654 234689999999999875 56788899999999999999999999755422 22
Q ss_pred HHHHHhcccchhhhcchhh-------cCCC-----hhHHHHHHHHHHHHhcccCcCCCC--CHHHHHHHHHhhhcC
Q psy520 394 YYLVVEQEVPVREVLDKEA-------GEWN-----ETHVETLISIVFEKCCVFEKDKRA--SMRDIVDLLSKSVNN 455 (455)
Q Consensus 394 ~~~~~~~~~~~~~~~d~~~-------~~~~-----~~~~~~~l~~Li~~~l~~dp~~RP--s~~evl~~L~~~~~~ 455 (455)
+..+-..+..+.-...+.. ...+ .......+...++.++..+|++|- ...++...+.+++++
T Consensus 238 ~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 238 WHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred hhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 2222211111111111110 0011 123344466678899999999998 888888888777753
No 240
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.8e-37 Score=304.85 Aligned_cols=258 Identities=25% Similarity=0.372 Sum_probs=201.8
Q ss_pred HHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC
Q psy520 158 DLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC 236 (455)
Q Consensus 158 ~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 236 (455)
++.+..+..+....|...+.||+|+||+||+|... +++.||+|++........ .....+.+|+.+++.+
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~----------~~~~~~~~Ei~~l~~l 72 (307)
T cd06607 3 EIAELFSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN----------EKWQDIIKEVRFLQQL 72 (307)
T ss_pred hHHHhhcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcH----------HHHHHHHHHHHHHHhC
Confidence 34445555666666777899999999999999986 489999999864322110 0134588999999999
Q ss_pred CCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEE
Q psy520 237 KHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 315 (455)
Q Consensus 237 ~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NIL 315 (455)
+||||+++++++.+ ...++|+||+. |+|.+.+.... .++++..+..++.|++.||.|||+ .+++||||+|+||+
T Consensus 73 ~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~--~~i~H~dl~p~nIl 147 (307)
T cd06607 73 RHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHS--HERIHRDIKAGNIL 147 (307)
T ss_pred CCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcccEE
Confidence 99999999998877 78899999995 67877776533 368999999999999999999999 88999999999999
Q ss_pred ECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc----CCCCChhhHHHHHHHHHHHHcCCCCCCCCchh
Q psy520 316 LDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTI 391 (455)
Q Consensus 316 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~ 391 (455)
++.++.+||+|||++...... ....|+..|+|||.+. +.++.++||||||+++|||+||..||...+..
T Consensus 148 ~~~~~~~kL~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~ 220 (307)
T cd06607 148 LTEPGTVKLADFGSASLVSPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 220 (307)
T ss_pred ECCCCCEEEeecCcceecCCC-------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH
Confidence 999999999999998754322 2346888999999762 45788999999999999999999999876533
Q ss_pred hHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 392 LYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 392 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.......... ........++..+.++|.+||..+|++||++.+|+.
T Consensus 221 ~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 221 SALYHIAQND----------SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred HHHHHHhcCC----------CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 2222111110 011112235566899999999999999999999976
No 241
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=9.5e-38 Score=303.05 Aligned_cols=260 Identities=24% Similarity=0.326 Sum_probs=197.7
Q ss_pred eHHHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHH
Q psy520 155 TFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTL 233 (455)
Q Consensus 155 ~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 233 (455)
.+..+..++++|... +.||+|+||.||+|.++. ++.||+|++..... . ...+.+|+.++
T Consensus 9 ~~~~~~~~~~~~~~~------~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~------~--------~~~~~~e~~~l 68 (286)
T cd06638 9 IFDSFPDPSDTWEII------ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD------I--------DEEIEAEYNIL 68 (286)
T ss_pred EeecCCCcccceeee------eeeccCCCcEEEEEEECCCCceeEEEeeccccc------h--------HHHHHHHHHHH
Confidence 334555566666544 899999999999999864 78999998753211 0 23477899999
Q ss_pred HcC-CCcceeccccccc-----C-cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeE
Q psy520 234 SQC-KHVNLLRLLGFCN-----N-IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPII 305 (455)
Q Consensus 234 ~~l-~h~niv~l~~~~~-----~-~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~ii 305 (455)
+++ +||||+++++++. + ...++||||+++++|.+++.... ....+++..+..++.|++.||.|||+ .+++
T Consensus 69 ~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~ 146 (286)
T cd06638 69 KALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV--NKTI 146 (286)
T ss_pred HHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh--CCcc
Confidence 999 6999999999762 2 56799999999999999876432 24568999999999999999999999 8899
Q ss_pred ecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHH
Q psy520 306 HRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELL 379 (455)
Q Consensus 306 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~ell 379 (455)
||||||+||+++.++.+||+|||+++....... ......|++.|+|||++. ..++.++|||||||++|||+
T Consensus 147 H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~ 223 (286)
T cd06638 147 HRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELG 223 (286)
T ss_pred ccCCCHHhEEECCCCCEEEccCCceeecccCCC---ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHh
Confidence 999999999999999999999999876543221 123356899999999764 23678999999999999999
Q ss_pred cCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 380 TGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 380 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+|..||............... .... ...+..++..+.+|+.+||..+|++||++.++++.
T Consensus 224 ~g~~p~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 224 DGDPPLADLHPMRALFKIPRN--PPPT-------LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cCCCCCCCCchhHHHhhcccc--CCCc-------ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 999999865432211111000 0000 00112234458889999999999999999999864
No 242
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.3e-37 Score=297.03 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=198.4
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||.|+||.||.++... +..+++|++........ ....+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 70 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK-----------ERRDALNEIVILSLLQHPNIIAYYNHFMD 70 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchh-----------HHHHHHHHHHHHHhCCCCCeeEEEeEEec
Confidence 5566899999999999998754 88999999864332110 13457899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...+++|||+++++|.+++.... ...+++.++..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 71 ~~~~~~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~ni~~~~~~~~kl~d~~~ 147 (256)
T cd08221 71 DNTLLIEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHK--AGILHRDIKTLNIFLTKAGLIKLGDFGI 147 (256)
T ss_pred CCeEEEEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh--CCccccCCChHhEEEeCCCCEEECcCcc
Confidence 78899999999999999997643 3568999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|++.|+|||.+.+ ..+.++|+||||+++|||++|..||...........+...... .
T Consensus 148 ~~~~~~~~~---~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~-- 220 (256)
T cd08221 148 SKILGSEYS---MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYT--P-- 220 (256)
T ss_pred eEEcccccc---cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--C--
Confidence 876543321 2234578999999997654 5688999999999999999999999875533222222111110 0
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
....++..+.+++.+||..+|.+||++.++++.
T Consensus 221 -------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 -------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 012345568889999999999999999999874
No 243
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.4e-37 Score=298.12 Aligned_cols=256 Identities=25% Similarity=0.372 Sum_probs=199.3
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||+||+|... ++..+|+|++....... ....+.+|+++++.++|+||+++++.+..
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (267)
T cd06610 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT------------SVDELRKEVQAMSQCNHPNVVKYYTSFVV 70 (267)
T ss_pred ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch------------HHHHHHHHHHHHHhcCCCCEEEEEEEEee
Confidence 456689999999999999976 47899999986432211 14558899999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++........+++..+..++.|++.||.|||+ .|++||||||+||++++++.+||+|||+
T Consensus 71 ~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~--~~i~h~~l~p~ni~~~~~~~~~l~df~~ 148 (267)
T cd06610 71 GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS--NGQIHRDIKAGNILLGEDGSVKIADFGV 148 (267)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEEcCCCCEEEcccch
Confidence 7889999999999999999864433468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCccc-ceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 330 VKMSETSNMKT-MYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+.......... .......|+..|+|||.+.. ..+.++|+|||||++|+|++|..||.................+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--- 225 (267)
T cd06610 149 SASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPP--- 225 (267)
T ss_pred HHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCC---
Confidence 87665433211 11234568999999997644 4788999999999999999999999866532222111111100
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+. .......++..+.+++.+|+..+|++||++.++++
T Consensus 226 ~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 SLE---TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CcC---CccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 00011245567889999999999999999999875
No 244
>KOG0584|consensus
Probab=100.00 E-value=7.4e-39 Score=321.91 Aligned_cols=245 Identities=25% Similarity=0.387 Sum_probs=199.2
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+...+||+|+|-+||+|.+.. |-.||--.++....... ....++|..|+.+|+.|+||||+++|.++.+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~---------~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~ 113 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQS---------PEELERLYSEVHLLKSLKHPNIIRFYDSWVDT 113 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcC---------hHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence 455789999999999999863 77776433332211111 1125789999999999999999999998766
Q ss_pred cc--eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC-CCceEEccc
Q psy520 251 IM--NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDF 327 (455)
Q Consensus 251 ~~--~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl~DF 327 (455)
.. .-+|.|.|..|+|..|+.+++ ..+...+..|++||+.||.|||+...+|||||||.+||+|+. .|.|||+|+
T Consensus 114 ~n~~in~iTEL~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDL 190 (632)
T KOG0584|consen 114 DNKTINFITELFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDL 190 (632)
T ss_pred CCceeeeeeecccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecch
Confidence 33 567999999999999999955 488999999999999999999998889999999999999975 599999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc---ch
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV---PV 404 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~---~~ 404 (455)
|||....... ...+.|||.|||||+....|+..+||||||..++||+|+..||.+.......+.....+. .+
T Consensus 191 GLAtl~r~s~-----aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl 265 (632)
T KOG0584|consen 191 GLATLLRKSH-----AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAAL 265 (632)
T ss_pred hHHHHhhccc-----cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHh
Confidence 9998765443 234799999999999999999999999999999999999999998885554444444222 22
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.++-|+ .++++|.+|+.. ...||++.|+++
T Consensus 266 ~kV~dP------------evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 266 SKVKDP------------EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hccCCH------------HHHHHHHHHhcC-chhccCHHHHhh
Confidence 333333 278899999999 999999999985
No 245
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.3e-37 Score=301.81 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=190.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|++. +|+.||+|+++....... ....+.+|+.++++++||||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~-----------~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 70 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-----------VPSSALREICLLKELKHKNIVRLYDVLHS 70 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccccc-----------CccchhHHHHHHHhcCCCCeeeHHHHhcc
Confidence 455688999999999999986 488999999875422111 02336789999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+. ++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 71 ~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~--~~i~H~dl~~~nil~~~~~~~~l~dfg~ 145 (284)
T cd07839 71 DKKLTLVFEYCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHS--HNVLHRDLKPQNLLINKNGELKLADFGL 145 (284)
T ss_pred CCceEEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEEcCCCcEEECccch
Confidence 78899999995 68888876532 468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhh-HHHHHHh--cccc-
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTIL-YYYLVVE--QEVP- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~-~~~~~~~--~~~~- 403 (455)
++....... ......++..|+|||.+.+ .++.++|||||||++|||+||..|+....... ....+.. ....
T Consensus 146 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07839 146 ARAFGIPVR---CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 222 (284)
T ss_pred hhccCCCCC---CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCCh
Confidence 875533211 1123467889999997654 35889999999999999999988865433211 1111110 0000
Q ss_pred -----hhhhcchhh-cCC--------ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 -----VREVLDKEA-GEW--------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -----~~~~~d~~~-~~~--------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+....+... ... ....++..+.++|.+||..||.+|||++++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 223 ESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000000 000 01124566889999999999999999999875
No 246
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.3e-38 Score=301.32 Aligned_cols=238 Identities=27% Similarity=0.376 Sum_probs=184.0
Q ss_pred CcccccCCEEEEEEEEcC--------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 176 NKLGEGQFGTVYYGKLKN--------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+.||+|+||.||+|..+. ...||+|.+..... .....|..|+.+++.+.||||++++++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~e~~~l~~~~h~~iv~~~~~ 67 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHR-------------NYSESFFEAASMMSQLSHKHLVLNYGV 67 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhH-------------HHHHHHHHHHHHHHhCCCCChhheeeE
Confidence 369999999999998742 23478888743211 113458889999999999999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc-----
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV----- 321 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~----- 321 (455)
+.. ...++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.
T Consensus 68 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~~~~~ 143 (258)
T cd05078 68 CVCGDESIMVQEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLED--KGLTHGNVCAKNVLLIREEDRKTGN 143 (258)
T ss_pred EEeCCCcEEEEecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCccceEEEecccccccCC
Confidence 876 78899999999999999997643 368999999999999999999999 89999999999999987765
Q ss_pred ---eEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcC-CCCCCCCchhhHHH
Q psy520 322 ---PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTG-MKPIDDNNTILYYY 395 (455)
Q Consensus 322 ---~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG-~~p~~~~~~~~~~~ 395 (455)
++++|||++..... .....++..|+|||.+.+ .++.++|||||||++|||++| ..||...+......
T Consensus 144 ~~~~~l~d~g~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~ 216 (258)
T cd05078 144 PPFIKLSDPGISITVLP-------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ 216 (258)
T ss_pred CceEEecccccccccCC-------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH
Confidence 68999998764332 223568889999997754 468899999999999999998 46665544322111
Q ss_pred HHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
. ......+ +......+.+++.+||..+|++||+++++++.|+
T Consensus 217 ~-~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 217 F-YEDRHQL------------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred H-HHccccC------------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1 1111111 1112244788999999999999999999998873
No 247
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.4e-37 Score=300.15 Aligned_cols=253 Identities=23% Similarity=0.380 Sum_probs=195.8
Q ss_pred cCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++...||+|+||.||+|+.+. .+.||+|.+..... . .....|.+|++++++++|+||+++++
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~ 75 (275)
T cd05046 8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD------E------NLQSEFRRELDMFRKLSHKNVVRLLG 75 (275)
T ss_pred eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc------h------HHHHHHHHHHHHHHhcCCcceeeeEE
Confidence 344889999999999999652 46789998753211 0 01445889999999999999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNT------PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
++.+ ...++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dlkp~Nili~~~ 153 (275)
T cd05046 76 LCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN--ARFVHRDLAARNCLVSSQ 153 (275)
T ss_pred EECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh--cCcccCcCccceEEEeCC
Confidence 8877 7889999999999999999865422 268999999999999999999999 889999999999999999
Q ss_pred CceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHH
Q psy520 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLV 397 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~ 397 (455)
+.++|+|||++........ .......++..|+|||.+ .+..+.++||||||+++|+|++ |..||............
T Consensus 154 ~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~ 231 (275)
T cd05046 154 REVKVSLLSLSKDVYNSEY--YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL 231 (275)
T ss_pred CcEEEcccccccccCcccc--cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH
Confidence 9999999999875432221 112234567789999965 4467889999999999999999 88899755432222221
Q ss_pred HhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
....... .....++..+.+++.+||..+|.+||++.++++.|.+
T Consensus 232 ~~~~~~~----------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 232 QAGKLEL----------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HcCCcCC----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 1111110 0112345568899999999999999999999998863
No 248
>KOG4279|consensus
Probab=100.00 E-value=9.2e-39 Score=321.79 Aligned_cols=241 Identities=27% Similarity=0.398 Sum_probs=197.8
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
-+||+|+||+||-|++.+ ...+|||-+..+.+ .. .+-++.|+..-++++|.|||+++|.+.+ +..
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds------r~-------~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~ 647 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS------RE-------VQPLHEEIALHSTLRHKNIVRYLGSVSENGFF 647 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc------hh-------hccHHHHHHHHHHHhhHhHHHHhhccCCCCeE
Confidence 579999999999999875 55679999865433 11 2337889999999999999999998776 777
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC-CCCceEEcccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPL--DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIV 330 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla 330 (455)
-|.||-.+||||.++|..+-+ |+ ++.+.-.+..||++||.|||+ ..|||||||-+|||++ -.|.+||+|||.+
T Consensus 648 kIFMEqVPGGSLSsLLrskWG--PlKDNEstm~fYtkQILeGLkYLHe--n~IVHRDIKGDNVLvNTySGvlKISDFGTs 723 (1226)
T KOG4279|consen 648 KIFMEQVPGGSLSSLLRSKWG--PLKDNESTMNFYTKQILEGLKYLHE--NKIVHRDIKGDNVLVNTYSGVLKISDFGTS 723 (1226)
T ss_pred EEEeecCCCCcHHHHHHhccC--CCccchhHHHHHHHHHHHHhhhhhh--cceeeccccCCcEEEeeccceEEecccccc
Confidence 789999999999999988654 56 888999999999999999999 7899999999999997 5799999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-C--CCCChhhHHHHHHHHHHHHcCCCCCCCCch--hhHHHHHHhcccchh
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-C--QISTKTDVFSYGVILLELLTGMKPIDDNNT--ILYYYLVVEQEVPVR 405 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~ 405 (455)
+....- +..++++.||..|||||++. | ++..++|||||||++.||.||++||.+... ..+..+-.-+
T Consensus 724 KRLAgi---nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyK----- 795 (1226)
T KOG4279|consen 724 KRLAGI---NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYK----- 795 (1226)
T ss_pred hhhccC---CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhccee-----
Confidence 876543 34578899999999999884 3 578899999999999999999999987652 2222221111
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....-+..++...+.+|.+|+.+||.+||++.+++.
T Consensus 796 ------vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 796 ------VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ------cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 112224567777899999999999999999999874
No 249
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.8e-37 Score=299.46 Aligned_cols=245 Identities=27% Similarity=0.379 Sum_probs=195.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||+|.+. +++.||+|.+...... . ....+.+|+++++.++|+||+++++++.+
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 70 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE-----D-------EIEDIQQEIQFLSQCRSPYITKYYGSFLK 70 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc-----h-------HHHHHHHHHHHHHHcCCCCeeeeeEEEEE
Confidence 455689999999999999986 4889999998643210 1 13447899999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++... ++++..+..++.|++.|+.|||+ ++++||||+|+||+++.++.++|+|||+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~ 144 (274)
T cd06609 71 GSKLWIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHE--EGKIHRDIKAANILLSEEGDVKLADFGV 144 (274)
T ss_pred CCeEEEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEccccc
Confidence 7889999999999999998762 78999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++...... .......|+..|+|||.+.+ .++.++|+||||+++|+|+||..||...+.......+.... .+
T Consensus 145 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~--- 216 (274)
T cd06609 145 SGQLTSTM---SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--PP--- 216 (274)
T ss_pred ceeecccc---cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--CC---
Confidence 88765432 12234578889999996644 57899999999999999999999997655322221111110 00
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......++..+.+++.+||..+|++||+++++++
T Consensus 217 -----~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 217 -----SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -----CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0011114556888999999999999999999975
No 250
>KOG0579|consensus
Probab=100.00 E-value=6.5e-39 Score=319.99 Aligned_cols=256 Identities=24% Similarity=0.393 Sum_probs=207.3
Q ss_pred hcCCCCCCCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcce
Q psy520 163 TDGFNRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL 241 (455)
Q Consensus 163 t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 241 (455)
.++.++..++++...||-|+||.||++..++ +-..|-|++..... . ..+.|.-|++||..|.||+|
T Consensus 25 ~rdlnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkse------E-------ELEDylVEIeILa~CdHP~i 91 (1187)
T KOG0579|consen 25 YRDLNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSE------E-------ELEDYLVEIEILAECDHPVI 91 (1187)
T ss_pred hccCCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccch------h-------HHhhhhhhhhhhhcCCChHH
Confidence 4456666677788899999999999999875 33346777753321 1 25668999999999999999
Q ss_pred ecccc-cccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 242 LRLLG-FCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 242 v~l~~-~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
|++++ |+.++..+++.|||.||-....+-..+. +|++.++.-++++++.||.|||+ ++|||||||..|||+.-+|
T Consensus 92 vkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs--~~iIHRDLKAGNiL~TldG 167 (1187)
T KOG0579|consen 92 VKLLSAYYFENKLWILIEFCGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHS--QNIIHRDLKAGNILLTLDG 167 (1187)
T ss_pred HHHHHHHhccCceEEEEeecCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhh--cchhhhhccccceEEEecC
Confidence 99998 6677999999999999999888877654 79999999999999999999999 8899999999999999999
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHH
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYY 394 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~ 394 (455)
.++|+|||.+-.... .......+.|||.|||||+.. ..|+.++|||||||+|.||..+.+|....+.....
T Consensus 168 dirLADFGVSAKn~~---t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl 244 (1187)
T KOG0579|consen 168 DIRLADFGVSAKNKS---TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL 244 (1187)
T ss_pred cEeeecccccccchh---HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH
Confidence 999999998653221 112235689999999999763 24788999999999999999999999877755444
Q ss_pred HHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 395 YLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 395 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...+.+ . ...+..++..+.+++..||..||..||+++++++
T Consensus 245 lKiaKSePP--T-------LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 245 LKIAKSEPP--T-------LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHhhcCCC--c-------ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 444332211 1 2235577888999999999999999999999875
No 251
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.6e-38 Score=302.83 Aligned_cols=257 Identities=23% Similarity=0.356 Sum_probs=194.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|.+++ ++.||+|++....... .....+.+|++++++++||||+++++++.+
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 71 (286)
T cd07846 3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-----------MVKKIAMREIRMLKQLRHENLVNLIEVFRR 71 (286)
T ss_pred eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-----------hhhHHHHHHHHHHHhcCCcchhhHHHhccc
Confidence 4556899999999999999864 8999999986433211 013447899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+.+++|.++... ...+++.++..++.|++.||.|||+ .+++||||+|+||++++++.++|+|||+
T Consensus 72 ~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 72 KKRLYLVFEFVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred CCeEEEEEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCcEEEEeeee
Confidence 788999999999988877654 2358999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccch---
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV--- 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~--- 404 (455)
+....... .......++..|+|||.+.+ ..+.++||||||+++|||++|.+||..................+
T Consensus 147 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T cd07846 147 ARTLAAPG---EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPR 223 (286)
T ss_pred eeeccCCc---cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchh
Confidence 87654332 11223568889999997654 36789999999999999999999997655322221111100000
Q ss_pred -hhhcchh-------hcCC--------ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 -REVLDKE-------AGEW--------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 -~~~~d~~-------~~~~--------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+.. .... ....++..+.+|+.+|+..+|.+||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 224 HQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000000 0000 01234567889999999999999999999875
No 252
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.8e-38 Score=339.87 Aligned_cols=251 Identities=22% Similarity=0.322 Sum_probs=193.4
Q ss_pred CCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.++||+|+||+||++.+.. +..||+|.+....... .....|..|+.++++++|||||++++++.
T Consensus 14 ~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-----------~~~~~~~~EI~IL~~L~HPNIVrl~d~f~ 82 (1021)
T PTZ00266 14 EYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-----------REKSQLVIEVNVMRELKHKNIVRYIDRFL 82 (1021)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-----------HHHHHHHHHHHHHHHcCCCCcCeEEEEEE
Confidence 45677999999999999999874 7789999986432210 01455889999999999999999999764
Q ss_pred C---cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCC-----CCeEecCCCCCcEEECC--
Q psy520 250 N---IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLS-----KPIIHRDVKSANVLLDE-- 318 (455)
Q Consensus 250 ~---~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~-----~~iiH~Dikp~NILl~~-- 318 (455)
+ ...||||||+++|+|.++|..... ...+++..++.|+.||+.||.|||+.. ++||||||||+||||+.
T Consensus 83 de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~ 162 (1021)
T PTZ00266 83 NKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI 162 (1021)
T ss_pred ecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence 3 467899999999999999975322 357999999999999999999999832 35999999999999964
Q ss_pred ---------------CCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHc
Q psy520 319 ---------------NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLT 380 (455)
Q Consensus 319 ---------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~ellt 380 (455)
.+.+||+|||++....... ......||+.|+|||++.+ .++.++||||||||+|||+|
T Consensus 163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred cccccccccccccCCCCceEEccCCccccccccc----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 3458999999987654322 1234579999999997643 36889999999999999999
Q ss_pred CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 381 GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 381 G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
|..||................. ..+....+..+.+||..||..+|.+||++.+++.
T Consensus 239 Gk~PF~~~~~~~qli~~lk~~p-----------~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 239 GKTPFHKANNFSQLISELKRGP-----------DLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCCCcCCcHHHHHHHHhcCC-----------CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9999976553221111111110 1111223455888999999999999999999984
No 253
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.5e-37 Score=294.61 Aligned_cols=249 Identities=24% Similarity=0.385 Sum_probs=196.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||+|.... ++.+|+|.+...... ....+.+|++++++++||||+++++++.+
T Consensus 5 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-------------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 71 (262)
T cd06613 5 YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-------------DFEIIQQEISMLKECRHPNIVAYFGSYLR 71 (262)
T ss_pred eEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-------------hHHHHHHHHHHHHhCCCCChhceEEEEEe
Confidence 4556899999999999999863 788999999643221 14558899999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|++|||+.+++|.+++.... ..+++.++..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+
T Consensus 72 ~~~~~l~~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~ 147 (262)
T cd06613 72 RDKLWIVMEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHE--TGKIHRDIKGANILLTEDGDVKLADFGV 147 (262)
T ss_pred CCEEEEEEeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHh--CCceecCCChhhEEECCCCCEEECcccc
Confidence 78899999999999999987642 468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
+....... .......++..|+|||.+.+ .++.++|+||||+++|||+||..||....................
T Consensus 148 ~~~~~~~~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 224 (262)
T cd06613 148 SAQLTATI---AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP 224 (262)
T ss_pred chhhhhhh---hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc
Confidence 87654321 11234578889999997643 478899999999999999999999987653322222211111100
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ......++..+.+++.+|+..+|.+||++.+|+.
T Consensus 225 ~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 225 K-------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred c-------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 0112345566889999999999999999999874
No 254
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.1e-37 Score=300.36 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=193.1
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||.|+||.||+|+++ +|+.||||+++....... ....+.+|++++++++||||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 70 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-----------VPSTAIREISLLKELNHPNIVKLLDVIHT 70 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccc-----------cchHHHHHHHHHHhcCCCCCcchhhhccc
Confidence 345589999999999999986 488999999864432111 12348899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+. ++|.+++.... ...+++.++..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 71 ~~~~~~v~e~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~--~~i~H~~l~p~nill~~~~~~~l~dfg~ 146 (284)
T cd07860 71 ENKLYLVFEFLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGL 146 (284)
T ss_pred CCcEEEEeeccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 78899999995 68999887643 3468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-C-CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccchhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-Q-ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~-~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~ 406 (455)
+........ ......++..|+|||.+.+ . .+.++|+|||||++|||+||..||.............. ...+...
T Consensus 147 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (284)
T cd07860 147 ARAFGVPVR---TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 223 (284)
T ss_pred hhhcccCcc---ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 875533211 1123357889999997654 3 57899999999999999999999976653322221111 1111000
Q ss_pred hc---c------hhhcCCC-------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VL---D------KEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~---d------~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. . .....+. ...++..+.++|.+|+..||.+||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 224 VWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00 0 0000000 0123455778999999999999999999874
No 255
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.2e-37 Score=301.55 Aligned_cols=247 Identities=26% Similarity=0.404 Sum_probs=195.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||.|+||.||+|.+. ++..||+|.+..... . ....|.+|++++++++||||+++++++.+
T Consensus 7 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (280)
T cd06611 7 WEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE------E-------ELEDFMVEIDILSECKHPNIVGLYEAYFY 73 (280)
T ss_pred HHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH------H-------HHHHHHHHHHHHHhCCCCceeEEEEEEec
Confidence 456689999999999999986 478999999863311 1 13458899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++.... .++++..++.++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~nili~~~~~~~l~d~g~ 149 (280)
T cd06611 74 ENKLWILIEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHS--HKVIHRDLKAGNILLTLDGDVKLADFGV 149 (280)
T ss_pred CCeEEEEeeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEECCCCCEEEccCcc
Confidence 78899999999999999987643 369999999999999999999999 8899999999999999999999999998
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+....... .......|++.|+|||.+. ..++.++|+||||+++|||++|..||...+.............+
T Consensus 150 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 226 (280)
T cd06611 150 SAKNKSTL---QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPP 226 (280)
T ss_pred chhhcccc---cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCC
Confidence 76543321 1123456899999999763 23577999999999999999999999876543222222111100
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+ ..+..++..+.++|.+|+..+|.+||++.++++
T Consensus 227 ---~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 227 ---TL------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ---Cc------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 00 011234556888999999999999999999976
No 256
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.4e-37 Score=299.84 Aligned_cols=258 Identities=23% Similarity=0.309 Sum_probs=196.6
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.+. +|+.||||++........ ....+.+|+.++++++||||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 70 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGG-----------IPNQALREIKALQACQHPYVVKLLDVFPH 70 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccch-----------hhHHHHHHHHHHHhCCCCCCcceeeEEec
Confidence 566789999999999999986 489999999875432110 13458899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+ +++|.+++.... .++++.++..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+
T Consensus 71 ~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~~~~~~~~~l~dfg~ 145 (286)
T cd07832 71 GSGFVLVMEYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHA--NGIMHRDLKPANLLISADGVLKIADFGL 145 (286)
T ss_pred CCeeEEEeccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCcCHHHEEEcCCCcEEEeeeee
Confidence 7889999999 999999987643 469999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cccc--
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVP-- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~-- 403 (455)
+........ .......|+..|+|||.+.+ .++.++||||+|+++|||++|.+||.............. ....
T Consensus 146 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T cd07832 146 ARLFSEEEP--RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEE 223 (286)
T ss_pred cccccCCCC--CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChH
Confidence 886644321 11234578999999997643 358899999999999999999888876553222211111 0000
Q ss_pred -hhhhc---chhh------c--CC--ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 -VREVL---DKEA------G--EW--NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -~~~~~---d~~~------~--~~--~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.+. +... . .+ .....+..+.++|.+|+..+|++||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 224 TWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000 0000 0 00 00133467889999999999999999999875
No 257
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.4e-37 Score=294.74 Aligned_cols=245 Identities=27% Similarity=0.414 Sum_probs=196.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.+.+ ++.||+|.+..... ...+.+|++++++++||||+++++++.+
T Consensus 5 y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------------~~~~~~e~~~~~~l~~~~i~~~~~~~~~ 69 (256)
T cd06612 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---------------LQEIIKEISILKQCDSPYIVKYYGSYFK 69 (256)
T ss_pred chhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---------------HHHHHHHHHHHHhCCCCcEeeeeeeeec
Confidence 4556899999999999999875 78999999853211 3458899999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+++||+++++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 70 ~~~~~l~~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~ni~~~~~~~~~l~dfg~ 145 (256)
T cd06612 70 NTDLWIVMEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHS--NKKIHRDIKAGNILLNEEGQAKLADFGV 145 (256)
T ss_pred CCcEEEEEecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEECCCCcEEEccccc
Confidence 78899999999999999987533 468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|+..|+|||.+.+ .++.++||||||+++|+|++|..||............... ...
T Consensus 146 ~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~--- 217 (256)
T cd06612 146 SGQLTDTMA---KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--PPP--- 217 (256)
T ss_pred chhcccCcc---ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC--CCC---
Confidence 886543321 1233568889999997644 5788999999999999999999999865432211111100 000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.......++..+.++|.+||..+|++||++.+|++
T Consensus 218 ----~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 218 ----TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ----CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00112234556888999999999999999999975
No 258
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.5e-37 Score=302.70 Aligned_cols=260 Identities=25% Similarity=0.366 Sum_probs=198.6
Q ss_pred eeHHHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHH
Q psy520 154 FTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT 232 (455)
Q Consensus 154 ~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 232 (455)
++..++..++++|... +.||+|+||.||++..+ +++.+|+|.+..... ....+.+|+.+
T Consensus 12 ~~~~~~~~~~~~y~~~------~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~--------------~~~~~~~e~~~ 71 (291)
T cd06639 12 LGLESLGDPTDTWEII------ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD--------------VDEEIEAEYNI 71 (291)
T ss_pred hhcccCCCCCCCeEEE------EEeecCCCeEEEEEEECCCCCEEEEEEeccccc--------------HHHHHHHHHHH
Confidence 3344555566666554 89999999999999986 488999999853211 02346789999
Q ss_pred HHcC-CCcceecccccccC------cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCe
Q psy520 233 LSQC-KHVNLLRLLGFCNN------IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPI 304 (455)
Q Consensus 233 l~~l-~h~niv~l~~~~~~------~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~i 304 (455)
+.++ +|||++++++++.. ...++||||+++++|.+++.... ....+++..++.++.|++.||.|||+ +++
T Consensus 72 l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i 149 (291)
T cd06639 72 LQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN--NRI 149 (291)
T ss_pred HHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh--CCe
Confidence 9998 89999999997643 35789999999999999886432 24568999999999999999999999 899
Q ss_pred EecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC------CCCChhhHHHHHHHHHHH
Q psy520 305 IHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------QISTKTDVFSYGVILLEL 378 (455)
Q Consensus 305 iH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~s~~sDi~SlGvvl~el 378 (455)
+||||||+||+++.++.+||+|||++........ ......|+..|+|||.+.. .++.++|+|||||++|||
T Consensus 150 vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el 226 (291)
T cd06639 150 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIEL 226 (291)
T ss_pred eccCCCHHHEEEcCCCCEEEeecccchhcccccc---cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHH
Confidence 9999999999999999999999999876543221 1223568899999997643 257899999999999999
Q ss_pred HcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 379 LTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 379 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++|.+||............... ..... ..+..+...+.++|.+||..+|++||++.++++
T Consensus 227 ~~g~~p~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 227 GDGDPPLFDMHPVKTLFKIPRN--PPPTL-------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred hhCCCCCCCCcHHHHHHHHhcC--CCCCC-------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 9999999866532211111111 00111 111234456889999999999999999999875
No 259
>KOG0574|consensus
Probab=100.00 E-value=6.1e-40 Score=302.94 Aligned_cols=242 Identities=24% Similarity=0.426 Sum_probs=200.3
Q ss_pred CCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc-cccCcc
Q psy520 175 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG-FCNNIM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~ 252 (455)
..+||+|+||.||++.++. |..+|||++....+ .+....|+.|+.+|++|++|++|| |+....
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD---------------LQEIIKEISIMQQC~S~yVVKYYGSYFK~sD 102 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD---------------LQEIIKEISIMQQCKSKYVVKYYGSYFKHSD 102 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCccch---------------HHHHHHHHHHHHHcCCchhhhhhhhhccCCc
Confidence 3789999999999999875 99999999975543 556889999999999999999999 455589
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++|||||..||..|.++.. ..+|++..+..++...+.||+|||.. .-||||||..|||++.+|.+||+|||.+-.
T Consensus 103 LWIVMEYCGAGSiSDI~R~R--~K~L~E~EIs~iL~~TLKGL~YLH~~--~KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 103 LWIVMEYCGAGSISDIMRAR--RKPLSEQEISAVLRDTLKGLQYLHDL--KKIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred eEeehhhcCCCcHHHHHHHh--cCCccHHHHHHHHHHHHhHHHHHHHH--HHHHhhcccccEEEcccchhhhhhccccch
Confidence 99999999999999998765 35899999999999999999999994 479999999999999999999999998865
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
....- ....++.||+-|||||++.. +++.++||||||++..||..|++||.+.......+.+. ..+.+
T Consensus 179 LTDTM---AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP--T~PPP------ 247 (502)
T KOG0574|consen 179 LTDTM---AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP--TKPPP------ 247 (502)
T ss_pred hhhhH---HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc--CCCCC------
Confidence 44321 22456899999999998854 78999999999999999999999998765332111111 11111
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+..++..+.+++.+|+.+.|++|.++.++++
T Consensus 248 -TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 248 -TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred -CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 11224567788999999999999999999999876
No 260
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5e-37 Score=300.43 Aligned_cols=246 Identities=26% Similarity=0.426 Sum_probs=195.8
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|.+.+.||.|+||.||+|... +++.||+|.+..... . ....+.+|+.+++.++|||++++++++.
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 86 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ------P-------KKELIINEILVMKELKNPNIVNFLDSFL 86 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC------c-------hHHHHHHHHHHHHhcCCCceeeeeeeEe
Confidence 3566689999999999999875 489999999864221 1 1344789999999999999999999877
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ ...++|+||+++++|.+++.. ..+++.++..++.+++.||.|||+ .|++||||||+||+++.++.+||+|||
T Consensus 87 ~~~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~--~~i~H~dL~p~Nili~~~~~~kl~dfg 160 (296)
T cd06655 87 VGDELFVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHA--NQVIHRDIKSDNVLLGMDGSVKLTDFG 160 (296)
T ss_pred cCceEEEEEEecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccCc
Confidence 6 788999999999999998864 358999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......|+..|+|||.+. +.++.++|+|||||++|+|++|..||...+.............+.
T Consensus 161 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~--- 234 (296)
T cd06655 161 FCAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPE--- 234 (296)
T ss_pred cchhcccccc---cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcc---
Confidence 9876543221 123457889999999764 457899999999999999999999998765432222111111000
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+..++..+.++|.+||..+|.+||++.++++
T Consensus 235 ------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 ------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0012234556888999999999999999999875
No 261
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.6e-37 Score=295.80 Aligned_cols=257 Identities=24% Similarity=0.373 Sum_probs=196.2
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+.++.||+|+||.||+|... +++.||+|++.......... ......+.+|+.++++++|+||+++++++.+
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 74 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQ-------EEVVEALRKEIRLMARLNHPHIIRMLGATCE 74 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhH-------HHHHHHHHHHHHHHHHcCCCceehhhceecc
Confidence 445689999999999999874 48999999986433211110 1124568899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC-ceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-VPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~-~~kl~DFG 328 (455)
+..++||||+++++|.+++.. ..++++..+..++.|++.||.|||+ +|++|+||||+||+++.++ .+||+|||
T Consensus 75 ~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~--~~i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 75 DSHFNLFVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHE--NQIIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred CCeEEEEEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEEcccc
Confidence 788999999999999999976 3468999999999999999999999 8999999999999998776 69999999
Q ss_pred ccccccCCCcc-cceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 329 IVKMSETSNMK-TMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++......... ........|+..|+|||.+.+ .++.++|+||+|+++|+|++|..||...............
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------ 223 (268)
T cd06630 150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKI------ 223 (268)
T ss_pred cccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHH------
Confidence 98766543211 111234568899999997654 5688999999999999999999999754421111111000
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.........+...+..+.+++.+|+..+|.+||++.++++
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 224 -ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0000001112345566888999999999999999999875
No 262
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.5e-37 Score=299.13 Aligned_cols=245 Identities=25% Similarity=0.409 Sum_probs=195.4
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|...++||.|+||.||+|.++. +..||||.+..... . .....+.+|+.+++++.||||+++++++.+
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA------E------DEIEDIQQEITVLSQCDSPYVTKYYGSYLK 73 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc------H------HHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence 3444889999999999999864 78999999864321 0 114568899999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++|+|.+++.. .++++.++..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 74 ~~~~~lv~e~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~--~~ivH~dl~p~Nil~~~~~~~~l~dfg~ 147 (277)
T cd06640 74 GTKLWIIMEYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHS--EKKIHRDIKAANVLLSEQGDVKLADFGV 147 (277)
T ss_pred CCEEEEEEecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCccCcCCChhhEEEcCCCCEEEccccc
Confidence 788999999999999998864 358999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... .......++..|+|||.+.+ ..+.++|+|||||++|||+||..||................
T Consensus 148 ~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~------- 217 (277)
T cd06640 148 AGQLTDTQ---IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN------- 217 (277)
T ss_pred ceeccCCc---cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC-------
Confidence 87654322 11233568889999997644 57889999999999999999999998665332211111000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.......++..+.+++.+|+..+|++||++.+++..
T Consensus 218 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 ----PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ----CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 011123456668899999999999999999999653
No 263
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.3e-37 Score=301.02 Aligned_cols=241 Identities=28% Similarity=0.423 Sum_probs=191.6
Q ss_pred CCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cc
Q psy520 175 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.+.||+|+||.||+|.+.. +..||+|.+..... . .....+.+|+.++++++||||+++++++.+ ..
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA------E------DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTK 76 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc------h------HHHHHHHHHHHHHHcCCCCccHhhhcccccCCc
Confidence 3789999999999998764 78899998853321 0 013458899999999999999999998776 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++++|.+++.. .++++..+..++.|++.|+.|||+ ++++|+||+|+||+++.++.++|+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~--~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06642 77 LWIIMEYLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHS--ERKIHRDIKAANVLLSEQGDVKLADFGVAGQ 150 (277)
T ss_pred eEEEEEccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhc--CCeeccCCChheEEEeCCCCEEEcccccccc
Confidence 8999999999999998864 368999999999999999999999 8999999999999999999999999999876
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......|+..|+|||.+.+ .++.++|+|||||++|||++|..||................
T Consensus 151 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~---------- 217 (277)
T cd06642 151 LTDTQ---IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS---------- 217 (277)
T ss_pred ccCcc---hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC----------
Confidence 54322 11223568889999997654 57889999999999999999999997554322111111000
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.......++..+.++|.+|+..+|.+||++.+|++
T Consensus 218 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 218 -PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00011234556889999999999999999999987
No 264
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.3e-37 Score=300.35 Aligned_cols=260 Identities=24% Similarity=0.324 Sum_probs=195.2
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|.+. +++.||||+++......... .....+..|++++++++|+||+++++++.+
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~--------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 73 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKD--------GINFTALREIKLLQELKHPNIIGLLDVFGH 73 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccc--------hhhHHHHHHHHHHhhcCCCCChhhhheeec
Confidence 445588999999999999986 48999999997544321111 013346789999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+ +|+|.+++.... ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nill~~~~~~~l~dfg~ 148 (298)
T cd07841 74 KSNINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHS--NWILHRDLKPNNLLIASDGVLKLADFGL 148 (298)
T ss_pred CCEEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCChhhEEEcCCCCEEEcccee
Confidence 7889999999 999999997633 369999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc-ccchh-
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVR- 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~- 405 (455)
++....... ......++..|+|||.+.+ .++.++|+|||||++|||++|.+||............... ..+..
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (298)
T cd07841 149 ARSFGSPNR---KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEE 225 (298)
T ss_pred eeeccCCCc---cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchh
Confidence 876544321 1223456788999997643 4688999999999999999998888765532211111110 00000
Q ss_pred ---------hhcchhh-cCC----ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 ---------EVLDKEA-GEW----NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ---------~~~d~~~-~~~----~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....... ... .....+..+.++|.+||..+|++||++.+|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 226 NWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred hhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0000000 000 01233566888999999999999999999986
No 265
>KOG0690|consensus
Probab=100.00 E-value=9.6e-39 Score=297.80 Aligned_cols=236 Identities=26% Similarity=0.387 Sum_probs=197.4
Q ss_pred CCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc-Ccc
Q psy520 175 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN-NIM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~ 252 (455)
.++||+|+||.|.+++-+ +++.||+|++++....... ....-..|-++|++++||.+..+--.+. .+.
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakd----------EVAHTlTE~RVL~~~~HPFLt~LKYsFQt~dr 242 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKD----------EVAHTLTENRVLQNCRHPFLTSLKYSFQTQDR 242 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehH----------HhhhhhhHHHHHHhccCcHHHHhhhhhccCce
Confidence 489999999999999877 4899999999887653221 1233567899999999999988854444 489
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||..||.|.-+|.+. ..+++...+.+...|+.||.|||+ ++||+||||.+|+|+|++|++||+|||+++.
T Consensus 243 lCFVMeyanGGeLf~HLsre---r~FsE~RtRFYGaEIvsAL~YLHs--~~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSRE---RVFSEDRTRFYGAEIVSALGYLHS--RNIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred EEEEEEEccCceEeeehhhh---hcccchhhhhhhHHHHHHhhhhhh--CCeeeeechhhhheeccCCceEeeecccchh
Confidence 99999999999999999874 459999999999999999999999 8999999999999999999999999999986
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
.-... ..+..++|||.|+|||++.. .+..++|+|.+|||+|||++|+.||.+.+.......+..++..++..+.+.
T Consensus 318 ~I~~g---~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~e 394 (516)
T KOG0690|consen 318 EIKYG---DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPE 394 (516)
T ss_pred ccccc---ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHH
Confidence 44322 33567999999999998854 688999999999999999999999998887666666665665555544443
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCC
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
.+.|++.++.+||++|.
T Consensus 395 ------------AktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 395 ------------AKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ------------HHHHHHHHhhcChHhhc
Confidence 67778899999999994
No 266
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.2e-37 Score=301.43 Aligned_cols=265 Identities=24% Similarity=0.379 Sum_probs=197.9
Q ss_pred CcCCCcccccCCEEEEEEEEc-----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
+.+.+.||+|+||.||+|.+. ++..||||.++..... .....|.+|+.+++.+.|+||+++++
T Consensus 6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~------------~~~~~~~~ei~~l~~l~~~~i~~~~~ 73 (284)
T cd05038 6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE------------QHRSDFEREIEILRTLDHENIVKYKG 73 (284)
T ss_pred chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch------------HHHHHHHHHHHHHHhCCCCChheEEe
Confidence 445588999999999999864 2678999998643321 11456899999999999999999999
Q ss_pred cccC---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 247 FCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 247 ~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
++.. ...++||||+++++|.+++.... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~ 149 (284)
T cd05038 74 VCEKPGGRSLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGS--QRYIHRDLAARNILVESEDLVK 149 (284)
T ss_pred eeecCCCCceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEEcCCCCEE
Confidence 8754 46789999999999999997643 258999999999999999999999 8899999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cc
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QE 401 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~ 401 (455)
|+|||++.................++..|+|||.+ ...++.++|+||||+++|||+||..|+.............. ..
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 229 (284)
T cd05038 150 ISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQ 229 (284)
T ss_pred EcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccccc
Confidence 99999998765332111111223455679999966 45678899999999999999999999865432111000000 00
Q ss_pred cch---hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 402 VPV---REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 402 ~~~---~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
... ...+........+..++..+.+++.+||..+|.+||++.+|++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 230 MIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 000 001111111111223445688899999999999999999999999876
No 267
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.8e-37 Score=302.23 Aligned_cols=246 Identities=27% Similarity=0.432 Sum_probs=194.5
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|.+.+.||+|+||.||+|... +++.||+|.+..... .. ...+.+|+.+++.++|+||+++++++.
T Consensus 20 ~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~~-------~~~~~~e~~~l~~~~h~~i~~~~~~~~ 86 (297)
T cd06656 20 KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ------PK-------KELIINEILVMRENKNPNIVNYLDSYL 86 (297)
T ss_pred hceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc------ch-------HHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 3455689999999999999975 589999999864321 11 244789999999999999999999877
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...++||||+++++|.+++.. ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||
T Consensus 87 ~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~--~~i~H~dL~p~Nili~~~~~~~l~Dfg 160 (297)
T cd06656 87 VGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFG 160 (297)
T ss_pred cCCEEEEeecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEECcCc
Confidence 6 788999999999999999864 358999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......|++.|+|||.+.+ .++.++|+|||||++|++++|..||...+.............+
T Consensus 161 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~---- 233 (297)
T cd06656 161 FCAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP---- 233 (297)
T ss_pred cceEccCCcc---CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCC----
Confidence 9876443221 1233568889999997644 5788999999999999999999999765432111111000000
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+...+..+.+++.+||..+|++||++.++++
T Consensus 234 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 234 -----ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred -----CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00112345566889999999999999999999987
No 268
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.2e-37 Score=296.62 Aligned_cols=262 Identities=23% Similarity=0.317 Sum_probs=199.4
Q ss_pred CcCCCcccccCCEEEEEEEEcC--CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHc-CCCcceecccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGFC 248 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~ 248 (455)
|.+.+.||+|+||.||+|.++. ++.+|+|.+............ ........+.+|+.++.+ ++||||+++++++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~---~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 78 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKR---ERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF 78 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccc---cchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence 3455899999999999999874 688999998654322111000 011124557789988875 7999999999987
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
.+ +..+++|||+++++|.+++.... ....+++..++.++.|++.||.|||+. .+++|+||||+||+++.++.+||+|
T Consensus 79 ~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 79 LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE-KRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC-CceeecCCCHHHEEECCCCcEEEec
Confidence 76 88899999999999999885432 245689999999999999999999952 5799999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
||++....... ......|+..|+|||.+. +.++.++|+||||+++|||++|..||.................
T Consensus 158 fg~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~--- 230 (269)
T cd08528 158 FGLAKQKQPES----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVY--- 230 (269)
T ss_pred ccceeeccccc----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccC---
Confidence 99988654332 223457899999999664 4578999999999999999999999976653322222111110
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.......++..+.+++.+||..||++||++.||...+++
T Consensus 231 -------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 231 -------EPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred -------CcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 000111234568889999999999999999999998863
No 269
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.5e-37 Score=295.43 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=196.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||++... +++.||+|.+...... . .....+.+|++++++++||||+++++++..
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT------E-----KEKQQLVSEVNILRELKHPNIVRYYDRIID 70 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC------H-----HHHHHHHHHHHHHHhcCCCccceeeeeeec
Confidence 455689999999999999876 4789999998643221 0 113558899999999999999999986643
Q ss_pred ---cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHH-----cCCCCeEecCCCCCcEEECCCCc
Q psy520 251 ---IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLH-----SLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH-----~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
...+++|||+++++|.+++..... ..++++..++.++.+++.||.||| + .+++|+||||+||+++.++.
T Consensus 71 ~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~--~~i~h~dl~p~nili~~~~~ 148 (265)
T cd08217 71 RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG--NTVLHRDLKPANIFLDANNN 148 (265)
T ss_pred CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc--CcceecCCCHHHEEEecCCC
Confidence 457899999999999999976422 457999999999999999999999 6 78999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 400 (455)
+||+|||++........ ......|++.|+|||.+.+ ..+.++|+||||+++|+|++|..||...........+...
T Consensus 149 ~kl~d~g~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 225 (265)
T cd08217 149 VKLGDFGLAKILGHDSS---FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG 225 (265)
T ss_pred EEEecccccccccCCcc---cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC
Confidence 99999999887654321 1234578999999997644 5788999999999999999999999876532222111111
Q ss_pred ccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ...+...+..+.+++.+|+..+|++||++.+|++
T Consensus 226 --~~---------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 226 --KF---------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred --CC---------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 10 0112234566889999999999999999999986
No 270
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.4e-37 Score=303.91 Aligned_cols=253 Identities=26% Similarity=0.351 Sum_probs=197.4
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|...+ ++.||+|.+........ .....+..|++++++++||||+++++.+.+
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 72 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR----------NKVKRVLTEQEILATLDHPFLPTLYASFQT 72 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH----------HHHHHHHHHHHHHHhCCCCCchhheeeeec
Confidence 4555899999999999999874 89999999975432110 114558899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+.+++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 73 ETYLCLVMDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHL--LGIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred CCEEEEEEEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHH--CCeeccCCChHHeEEcCCCCEEEeecch
Confidence 78899999999999999987532 3568999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcc--------------------------cceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCC
Q psy520 330 VKMSETSNMK--------------------------TMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGM 382 (455)
Q Consensus 330 a~~~~~~~~~--------------------------~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~ 382 (455)
+......... ........||..|+|||++.+ ..+.++||||||+++|+|++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~ 229 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCC
Confidence 8754322110 001123578999999996644 5788999999999999999999
Q ss_pred CCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC----HHHHHH
Q psy520 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS----MRDIVD 447 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs----~~evl~ 447 (455)
.||...+............... ......+..+.++|.+|+..+|++||+ ++++++
T Consensus 230 ~pf~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 230 TPFKGSNRDETFSNILKKEVTF----------PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCCCCCchHHHHHHHhcCCccC----------CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 9998765433222221111111 111125667999999999999999999 777765
No 271
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.1e-37 Score=300.52 Aligned_cols=246 Identities=25% Similarity=0.397 Sum_probs=193.2
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.++...+||+|+||.||++... +++.||+|.+..... . ....+.+|+.++..++||||+++++++.
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~hp~i~~~~~~~~ 88 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ------Q-------RRELLFNEVVIMRDYQHQNVVEMYKSYL 88 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc------c-------hHHHHHHHHHHHHhCCCCchhhhhhhee
Confidence 3344478999999999999876 488999999864321 0 1344789999999999999999999776
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...++|+||+++++|.+.+.. ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 89 ~~~~~~iv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~--~~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 89 VGEELWVLMEFLQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHS--QGVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred eCCeEEEEEecCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHeEEccCCcEEEeech
Confidence 6 788999999999999987754 358999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... .......|+..|+|||.+.+ .++.++|+|||||++|||++|..||.................. ..
T Consensus 163 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~ 237 (297)
T cd06659 163 FCAQISKDV---PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP--KL 237 (297)
T ss_pred hHhhccccc---ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC--Cc
Confidence 987543321 11234578999999997654 6788999999999999999999999865533222211111000 00
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....++..+.++|.+|+..+|++||++.++++
T Consensus 238 -------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 238 -------KNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred -------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 001123455788999999999999999999987
No 272
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.9e-37 Score=303.17 Aligned_cols=256 Identities=20% Similarity=0.261 Sum_probs=195.3
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++..+. ++.||+|.+....... ......+.+|+++++.++||||+++++.+..
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~----------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 72 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL----------RNQIQQVFVERDILTFAENPFVVSMFCSFET 72 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh----------HHHHHHHHHHHHHHHhCCCCCeeeeEEEEec
Confidence 3455899999999999999874 7899999986432100 0113457899999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||++|++|.+++... .++++..+..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 73 KRHLCMVMEYVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHN--YGIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred CCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCchHHEEECCCCCEEEeeCCC
Confidence 7789999999999999999763 468999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcc------------cceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHH
Q psy520 330 VKMSETSNMK------------TMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYL 396 (455)
Q Consensus 330 a~~~~~~~~~------------~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~ 396 (455)
++........ ........|+..|+|||.+ .+..+.++|+|||||++|||++|..||.+.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~ 227 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ 227 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8743211100 0111234678899999966 44678999999999999999999999986553322222
Q ss_pred HHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
........+ .....++..+.++|.+|+..+|++||+..++.+.|+.
T Consensus 228 ~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 228 VISDDIEWP---------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHhcccCCC---------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 111111100 0111345568899999999999999997666666553
No 273
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.8e-37 Score=298.37 Aligned_cols=245 Identities=24% Similarity=0.355 Sum_probs=190.6
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccccc-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCN- 249 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~- 249 (455)
++.+.||+|+||.||+|.+.. ++.||+|.+..... ....+..|+.+++++ +|+||+++++++.
T Consensus 19 ~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~--------------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 19 ELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED--------------EEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH--------------HHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 344899999999999999864 78999999854211 133478899999998 6999999999763
Q ss_pred ------CcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 250 ------NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 250 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
....|++|||+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++++|+||||+||+++.++.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~--~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHA--HKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEE
Confidence 246789999999999999887643 3458899999999999999999999 8999999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHH
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 397 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~ 397 (455)
|+|||++....... .......|+..|+|||.+. ..++.++|+|||||++|||++|..||............
T Consensus 162 l~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~ 238 (282)
T cd06636 162 LVDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI 238 (282)
T ss_pred EeeCcchhhhhccc---cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH
Confidence 99999987543221 1123457899999999763 24677999999999999999999999765432111111
Q ss_pred HhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ..........++..+.+||.+||..||.+||++.++++
T Consensus 239 ~~----------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 239 PR----------NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hh----------CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 10 00011112235566899999999999999999999874
No 274
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9e-37 Score=297.09 Aligned_cols=259 Identities=23% Similarity=0.306 Sum_probs=191.3
Q ss_pred CCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 169 KPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
...|++.+.||+|+||.||+|..+ +++.||||.+........ ...+.+|++++++++|+||++++++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~~i~~~~~~ 71 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------PFTAIREASLLKDLKHANIVTLHDI 71 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------chhHHHHHHHHhhCCCcceeeEEEE
Confidence 345667799999999999999986 478999999865432110 1236789999999999999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...++||||+. ++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 72 ~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~d 146 (291)
T cd07844 72 IHTKKTLTLVFEYLD-TDLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQ--RRVLHRDLKPQNLLISERGELKLAD 146 (291)
T ss_pred EecCCeEEEEEecCC-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCHHHEEEcCCCCEEECc
Confidence 877 78899999997 59999887643 368999999999999999999999 8899999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchh-hHHHHHHh-ccc
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYLVVE-QEV 402 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~-~~~~~~~~-~~~ 402 (455)
||+++....... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||...... ........ -..
T Consensus 147 fg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
T cd07844 147 FGLARAKSVPSK---TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGT 223 (291)
T ss_pred cccccccCCCCc---cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCC
Confidence 999875432211 1122356888999997644 4688999999999999999999999765411 11111100 000
Q ss_pred chhhhc----------c--------hhh-cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 PVREVL----------D--------KEA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~----------d--------~~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+..... . ... ...........+.+++.+||..+|++||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 224 PTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred CChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000 0 000 00000011145678899999999999999999875
No 275
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.3e-37 Score=292.38 Aligned_cols=251 Identities=29% Similarity=0.424 Sum_probs=196.2
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|... +++.||+|.++..... ......+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~ 70 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-----------PKTIKEIADEMKVLELLKHPNLVKYYGVEVH 70 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-----------hHHHHHHHHHHHHHHhCCCCChhheeeeEec
Confidence 556689999999999999976 4889999998754321 0114568999999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.. ...+++..+..++.+++.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~~~nil~~~~~~~kl~d~g~ 145 (264)
T cd06626 71 REKVYIFMEYCSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHS--HGIVHRDIKPANIFLDHNGVIKLGDFGC 145 (264)
T ss_pred CCEEEEEEecCCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccccc
Confidence 788999999999999999886 3458899999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccce-eccCCCCCCcCCcccccCC----CCChhhHHHHHHHHHHHHcCCCCCCCCchhh-HHHHHHhcccc
Q psy520 330 VKMSETSNMKTMY-TENLTGTRPYMPPEAMHCQ----ISTKTDVFSYGVILLELLTGMKPIDDNNTIL-YYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~----~s~~sDi~SlGvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~ 403 (455)
+............ .....++..|+|||.+.+. .+.++||||||+++|++++|..||...+... ..........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~- 224 (264)
T cd06626 146 AVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHK- 224 (264)
T ss_pred ccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCC-
Confidence 8876543322111 2235688899999977543 6789999999999999999999997653211 1111110000
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. . ......++..+.++|.+||..+|.+||++.+++.
T Consensus 225 -~-----~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 -P-----P--IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -C-----C--CCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 0 0011123455778999999999999999999864
No 276
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.1e-37 Score=306.32 Aligned_cols=259 Identities=23% Similarity=0.361 Sum_probs=191.6
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|.+.++||+|+||.||+|.+. +|+.||||++..... . .....+.+|+.++++++||||+++++++.
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 73 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH------Q------TFCQRTLREIKILRRFKHENIIGILDIIR 73 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc------c------hhHHHHHHHHHHHHhCCCCCcCchhheee
Confidence 4566799999999999999876 489999999853211 0 01344778999999999999999998754
Q ss_pred C------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 250 N------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 250 ~------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
. ...++|+||+. ++|.+.+.. ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+|
T Consensus 74 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~--~~ivH~dlkp~Nill~~~~~~k 146 (336)
T cd07849 74 PPSFESFNDVYIVQELME-TDLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHS--ANVLHRDLKPSNLLLNTNCDLK 146 (336)
T ss_pred cccccccceEEEEehhcc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEECCCCCEE
Confidence 3 34689999995 588877753 368999999999999999999999 8899999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCccccc--CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-- 399 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-- 399 (455)
|+|||++.................||+.|+|||.+. ..++.++|||||||++|+|++|+.||...+..........
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~ 226 (336)
T cd07849 147 ICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVL 226 (336)
T ss_pred ECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 999999876543322222223457899999999653 3578899999999999999999999976552211111110
Q ss_pred cccc---hhhhcchhh------------cCCC--hhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 400 QEVP---VREVLDKEA------------GEWN--ETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 400 ~~~~---~~~~~d~~~------------~~~~--~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.... .....+... ..+. ....+..+.+++.+||..+|++||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 227 GTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1000 000000000 0000 01234558899999999999999999999874
No 277
>KOG4257|consensus
Probab=100.00 E-value=1e-37 Score=311.40 Aligned_cols=252 Identities=26% Similarity=0.412 Sum_probs=206.4
Q ss_pred cCCCcccccCCEEEEEEEEcC-----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGF 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
...++||+|-||.||+|...+ .-.||||+.+.+... ++ .+.|++|.-++++++||||++++|.
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-----d~-------tekflqEa~iMrnfdHphIikLIGv 459 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-----DD-------TEKFLQEASIMRNFDHPHIIKLIGV 459 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-----hh-------HHHHHHHHHHHHhCCCcchhheeee
Confidence 356889999999999998642 235899999764331 11 4559999999999999999999999
Q ss_pred ccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
|.+...+||||.++-|.|..+|+... ..++......++.||+.||.|||+ +.+|||||-..|||+.....+||+||
T Consensus 460 ~~e~P~WivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeS--krfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 460 CVEQPMWIVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLES--KRFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred eeccceeEEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHh--hchhhhhhhhhheeecCcceeeeccc
Confidence 99999999999999999999998854 468999999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|++|......... .+...-..-|||||.+ ..+++++||||-|||.+||++. |..||.+.......-.
T Consensus 536 GLSR~~ed~~yYk--aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~--------- 604 (974)
T KOG4257|consen 536 GLSRYLEDDAYYK--ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH--------- 604 (974)
T ss_pred chhhhccccchhh--ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE---------
Confidence 9999887664332 2222334569999965 4679999999999999999998 9999987543221111
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
++.......++.++..+..|+.+||..+|.+||.++++...|++++
T Consensus 605 --iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 605 --IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred --ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 2222222335567777888999999999999999999999998875
No 278
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=8.5e-37 Score=295.88 Aligned_cols=257 Identities=23% Similarity=0.321 Sum_probs=194.6
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||.|++|.||+|+++ +|+.||||+++...... ....+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 69 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG------------TPSTAIREISLMKELKHENIVRLHDVIHT 69 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccccc------------chHHHHHHHHHHHhhcCCCEeeeeeeEee
Confidence 345589999999999999986 48899999997543211 02346789999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||++ ++|.+++........+++.++..++.|++.||.|||+ .+++||||||+||++++++.++|+|||+
T Consensus 70 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~h~dl~p~ni~~~~~~~~~l~d~g~ 146 (284)
T cd07836 70 ENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE--NRVLHRDLKPQNLLINKRGELKLADFGL 146 (284)
T ss_pred CCcEEEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEECCCCcEEEeecch
Confidence 78899999997 5899988765544579999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccchhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~ 406 (455)
+........ ......++..|+|||.+.+ .++.++|+|||||++|+|++|..||.............. ...+...
T Consensus 147 ~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (284)
T cd07836 147 ARAFGIPVN---TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTES 223 (284)
T ss_pred hhhhcCCcc---ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChh
Confidence 875433211 1123467889999997644 357899999999999999999999986653221111111 0000000
Q ss_pred hc-----------------chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VL-----------------DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~-----------------d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+ +..... .....+..+.+++.+|+..||.+||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 224 TWPGISQLPEYKPTFPRYPPQDLQQ-LFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hHHHHhcCchhcccccCCChHHHHH-HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 000000 01123566889999999999999999999875
No 279
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=7.9e-37 Score=296.13 Aligned_cols=256 Identities=23% Similarity=0.321 Sum_probs=193.3
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||.|++|.||+|.++ +|+.||+|++........ ....+.+|++++++++|||++++++++.+
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~ 70 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG-----------VPSTAIREISLLKELNHPNIVRLLDVVHSE 70 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc-----------chhHHHHHHHHHHhcCCCCccCHhheeccC
Confidence 45589999999999999986 589999999875432111 02337789999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...+++|||+ +++|.+++..... ..+++..+..++.|++.||.|||+ ++++||||+|+||+++.++.++|+|||++
T Consensus 71 ~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~--~~~~H~dl~p~nil~~~~~~~~l~df~~~ 146 (283)
T cd07835 71 NKLYLVFEFL-DLDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHS--HRVLHRDLKPQNLLIDREGALKLADFGLA 146 (283)
T ss_pred CeEEEEEecc-CcCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeCCCCCHHHEEEcCCCcEEEeecccc
Confidence 7889999999 5799999876432 368999999999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc-ch---
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV-PV--- 404 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~-~~--- 404 (455)
+....... ......++..|+|||.+.+ .++.++|+||||+++|+|++|.+||................. +.
T Consensus 147 ~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 223 (283)
T cd07835 147 RAFGVPVR---TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDV 223 (283)
T ss_pred cccCCCcc---ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHH
Confidence 75433211 1123356889999997644 358899999999999999999999987653322222111100 00
Q ss_pred -------hhhcchhhcCC-------ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 -------REVLDKEAGEW-------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 -------~~~~d~~~~~~-------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++.... ...+ .....+..+.++|.+|+..+|.+||+++++++
T Consensus 224 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 224 WPGVTSLPDYKPT-FPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhchhhhhh-cccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 0000 01233456788999999999999999999875
No 280
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4.8e-37 Score=296.74 Aligned_cols=245 Identities=27% Similarity=0.397 Sum_probs=193.7
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC---Ccceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK---HVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~ 247 (455)
|+..+.||+|+||.||+|.+. +++.||+|.++..... . ....+.+|+.++++++ |||+++++++
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-----~-------~~~~~~~e~~~l~~l~~~~~~~vi~~~~~ 70 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD-----D-------DVSDIQREVALLSQLRQSQPPNITKYYGS 70 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc-----h-------hHHHHHHHHHHHHHhccCCCCCeeeEeee
Confidence 455589999999999999975 4899999998643221 1 1345788999999986 9999999998
Q ss_pred ccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...|+||||+++++|.+++.. .++++..++.++.+++.||.|||+ .|++||||+|+||+++.++.++|+|
T Consensus 71 ~~~~~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~p~ni~i~~~~~~~l~d 144 (277)
T cd06917 71 YLKGPRLWIIMEYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHK--VGVIHRDIKAANILVTNTGNVKLCD 144 (277)
T ss_pred eeeCCEEEEEEecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHHEEEcCCCCEEEcc
Confidence 776 788999999999999998865 268999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccch
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||++....... .......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||............. ..
T Consensus 145 fg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--~~-- 217 (277)
T cd06917 145 FGVAALLNQNS---SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP--KS-- 217 (277)
T ss_pred CCceeecCCCc---cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc--cC--
Confidence 99987665432 11234578999999997653 35789999999999999999999998665322111111 00
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.........++..+.+++.+|+..||.+||++.+++.
T Consensus 218 ------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 218 ------KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ------CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0111111224556888999999999999999999965
No 281
>KOG4717|consensus
Probab=100.00 E-value=9.8e-38 Score=305.68 Aligned_cols=245 Identities=24% Similarity=0.340 Sum_probs=201.6
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+-||+|-|..|-++++- +|..||||++.+...... ....+.+|++.|+-++|||||++|+....
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-----------st~hlfqEVRCMKLVQHpNiVRLYEViDT 88 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-----------STGHLFQEVRCMKLVQHPNIVRLYEVIDT 88 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-----------hhhHHHHHHHHHHHhcCcCeeeeeehhcc
Confidence 455688999999999999865 599999999976654211 13447899999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC-CCCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~-~~~~~kl~DFG 328 (455)
...|||+|+-.+|+|+|++.+++. .+.+....+++.||+.|+.|+|. -.+|||||||+||.+. +-|-+||.|||
T Consensus 89 QTKlyLiLELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHq--LHVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 89 QTKLYLILELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQ--LHVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred cceEEEEEEecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhh--hhhhcccCCcceeEEeeecCceEeeecc
Confidence 788999999999999999998765 69999999999999999999999 5699999999999886 56899999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CC-CChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~-s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++..+.... ...+.+|+.+|-|||++.| .| .+++||||||||||.|.+|++||.+.+.....- .
T Consensus 165 FSNkf~PG~----kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT----------m 230 (864)
T KOG4717|consen 165 FSNKFQPGK----KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT----------M 230 (864)
T ss_pred ccccCCCcc----hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh----------h
Confidence 987665443 2346799999999997766 45 568999999999999999999998765432222 2
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++|-+ ..-+..++...++||..||..||++|.+.+++..
T Consensus 231 ImDCK--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 231 IMDCK--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhccc--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 22221 2234567778999999999999999999999864
No 282
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=5.8e-37 Score=292.51 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=196.3
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++... +|+.||+|.+....... . ....+.+|+.++++++||||+++++++.+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~----~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP----K-------EREESRKEVAVLSNMKHPNIVQYQESFEE 70 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh----H-------HHHHHHHHHHHHHhCCCCCeeeeEeeecC
Confidence 455689999999999999876 48899999986432210 0 13458899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.... ...+++.++..++.|++.|+.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~l~~~nil~~~~~~~~l~d~~~ 147 (256)
T cd08218 71 NGNLYIVMDYCEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHD--RKILHRDIKSQNIFLTKDGTIKLGDFGI 147 (256)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEEeeccc
Confidence 78899999999999999987532 2357899999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|++.|+|||.+. +..+.++|+|||||++++|++|..||...+.......+.....+
T Consensus 148 ~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~----- 219 (256)
T cd08218 148 ARVLNSTVE---LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYP----- 219 (256)
T ss_pred eeecCcchh---hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCC-----
Confidence 876543221 122346888999999764 45688999999999999999999999866533222222111110
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...+..+.++|.+|+..+|.+||++.+|++
T Consensus 220 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 220 ------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 011234455888999999999999999999986
No 283
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1e-36 Score=293.64 Aligned_cols=256 Identities=23% Similarity=0.350 Sum_probs=193.9
Q ss_pred cCCCcccccCCEEEEEEEEc----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
++.+.||+|+||.||+|.+. ++..||||.+....... .....+.+|++++++++||||+++++++
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 70 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-----------SDIEEFLREAACMKEFDHPNVIKLIGVS 70 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-----------HHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence 45688999999999999864 36789999986432210 1145588999999999999999999976
Q ss_pred cC-c------ceeEEEEeccCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC
Q psy520 249 NN-I------MNCIVYEYMCNGSLYDRLARVN---NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 249 ~~-~------~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
.. . ..+++++|+.+|+|.+++.... ....+++..+..++.|++.||+|||+ .+++||||||+||+++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~nili~~ 148 (273)
T cd05074 71 LRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS--KNFIHRDLAARNCMLNE 148 (273)
T ss_pred ccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccchhhEEEcC
Confidence 43 1 2368899999999998875422 12357899999999999999999999 89999999999999999
Q ss_pred CCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHH
Q psy520 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
++.+||+|||+++........ .......+++.|++||.+. +..+.++|||||||++|||++ |.+||...........
T Consensus 149 ~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~ 227 (273)
T cd05074 149 NMTVCVADFGLSKKIYSGDYY-RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNY 227 (273)
T ss_pred CCCEEECcccccccccCCcce-ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHH
Confidence 999999999998865432211 1112234567899999664 456889999999999999999 8999976653322221
Q ss_pred HHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
+.... ... .....+..+.+++.+||..+|.+||++.++++.|+++.
T Consensus 228 ~~~~~-~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 228 LIKGN-RLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred HHcCC-cCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 11110 000 01123456888999999999999999999999998763
No 284
>KOG0199|consensus
Probab=100.00 E-value=5.3e-38 Score=316.88 Aligned_cols=246 Identities=26% Similarity=0.400 Sum_probs=206.4
Q ss_pred CcccccCCEEEEEEEEcC--Cc--EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCc
Q psy520 176 NKLGEGQFGTVYYGKLKN--GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~--~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
++||+|.||.|++|.|+. |+ .||||.++...... ....|.+|+.+|.+++|||+++|||...+.
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~------------~mddflrEas~M~~L~H~hliRLyGvVl~q 183 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA------------IMDDFLREASHMLKLQHPHLIRLYGVVLDQ 183 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch------------hHHHHHHHHHHHHhccCcceeEEeeeeccc
Confidence 789999999999999974 44 57999997654421 134599999999999999999999999888
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
...+|+|+++.|||.++|++ .....|.....+.++.|||.|++||.+ +++|||||-..|+||...-.+||+||||.|
T Consensus 184 p~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes--krlvHRDLAARNlllasprtVKI~DFGLmR 260 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES--KRLVHRDLAARNLLLASPRTVKICDFGLMR 260 (1039)
T ss_pred hhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhhhheecccceeeeeccccee
Confidence 88899999999999999998 446789999999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
.....+..-.+.....-..+|+|||.+ .+.++.+||||+|||++|||+| |..||.+.+....... +|
T Consensus 261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~-----------iD 329 (1039)
T KOG0199|consen 261 ALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN-----------ID 329 (1039)
T ss_pred ccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh-----------cc
Confidence 887664332333334446679999965 6789999999999999999999 8999998875544333 33
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.....+..+++.+.+++..||.++|.+||++..+.+
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 33333345567888999999999999999999999864
No 285
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3e-37 Score=298.85 Aligned_cols=247 Identities=27% Similarity=0.328 Sum_probs=187.4
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHH-HHcCCCcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT-LSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~ 250 (455)
++.+.||+|+||.||+|.++ +|+.||+|+++..... .. ...+..|+.+ ++...||||+++++++..
T Consensus 4 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~-------~~~~~~e~~~~~~~~~~~~iv~~~~~~~~ 71 (283)
T cd06617 4 EVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-----QE-------QKRLLMDLDISMRSVDCPYTVTFYGALFR 71 (283)
T ss_pred eEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-----HH-------HHHHHHHHHHHHHHcCCCCeeeeeEEEec
Confidence 44588999999999999987 4899999998643221 00 1234556665 566789999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCC-CeEecCCCCCcEEECCCCceEEccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSK-PIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~-~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...+++|||++ |+|.+++.... ....+++..+..++.|++.||.|||+ + +++||||||+||+++.++.+||+||
T Consensus 72 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~~i~h~dlkp~nil~~~~~~~kl~df 148 (283)
T cd06617 72 EGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDF 148 (283)
T ss_pred CCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeec
Confidence 78899999995 78888876532 24579999999999999999999998 6 8999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
|+++...... ......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||................
T Consensus 149 g~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~- 223 (283)
T cd06617 149 GISGYLVDSV----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE- 223 (283)
T ss_pred cccccccccc----ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc-
Confidence 9987653321 1223568899999997743 35789999999999999999999997543211111100010
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+...++..+.++|.+||..+|.+||++.++++
T Consensus 224 --------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 --------PSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011112234566889999999999999999999986
No 286
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6e-37 Score=291.89 Aligned_cols=248 Identities=32% Similarity=0.504 Sum_probs=195.6
Q ss_pred CCCcccccCCEEEEEEEEcC-C----cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 174 RGNKLGEGQFGTVYYGKLKN-G----MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~----~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
+.+.||.|+||.||++.+.+ + ..||+|+++...... ....+..|+..+.+++|+||+++++++
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~i~~~~~~~ 70 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ------------QIEEFLREARIMRKLDHPNIVKLLGVC 70 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH------------HHHHHHHHHHHHHhcCCCchheEEEEE
Confidence 45889999999999999874 3 789999986432210 145688999999999999999999988
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ +..+++|||+++++|.+++..... ..+++.++..++.|++.||+|||+ .+++||||||+||+++.++.++|+||
T Consensus 71 ~~~~~~~~i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~--~~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 71 TEEEPLMIVMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLES--KNFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred cCCCeeEEEEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhc--CCeeecccccceEEEccCCeEEEccc
Confidence 77 788999999999999999976332 128999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|++.......... .....++..|+|||.+ .+..+.++|+||+|+++|+|++ |.+||.................
T Consensus 148 g~~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--- 222 (258)
T smart00219 148 GLSRDLYDDDYYK--KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR--- 222 (258)
T ss_pred CCceecccccccc--cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---
Confidence 9988765442111 1123477899999966 4457889999999999999998 8999876543322222211110
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
.......+..+.+++.+|+..+|++||++.++++.|
T Consensus 223 --------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 --------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011122455688899999999999999999998764
No 287
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.6e-36 Score=299.58 Aligned_cols=246 Identities=26% Similarity=0.400 Sum_probs=193.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|...+.||+|+||.||+|.+. ++..||+|++........ . ....+.+|++++++++|||++++++++.+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~---~-------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 96 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN---E-------KWQDIIKEVKFLQRIKHPNSIEYKGCYLR 96 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch---H-------HHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 444588999999999999976 488999999864322110 0 13458899999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+. |+|.+.+... ..++++.++..++.+++.||.|||+ ++++||||+|+||+++.++.+||+|||+
T Consensus 97 ~~~~~lv~e~~~-g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~--~~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 97 EHTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred CCeEEEEEeCCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcccEEECCCCCEEEecCCC
Confidence 77889999996 5888877653 3468999999999999999999999 8999999999999999999999999998
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc----CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
+..... .....|+..|+|||.+. +..+.++|+|||||++|||++|..||.................
T Consensus 172 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--- 241 (317)
T cd06635 172 ASIASP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--- 241 (317)
T ss_pred ccccCC-------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC---
Confidence 765432 12346888999999752 4578899999999999999999999976543322222211110
Q ss_pred hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q psy520 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
.......++..+.+++.+|+..+|.+||++.+|++.+
T Consensus 242 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 242 -------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 1112234556689999999999999999999998743
No 288
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.5e-36 Score=291.58 Aligned_cols=252 Identities=29% Similarity=0.396 Sum_probs=194.1
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++++.||+|+||.||+|.+. +++.||+|.+......... ......+.+|+.++++++|+||+++++++.+
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--------~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 75 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--------SKEVNALECEIQLLKNLRHDRIVQYYGCLRD 75 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--------hHHHHHHHHHHHHHHHcCCCCcceEEEEEEc
Confidence 456799999999999999976 4899999998543221110 1124568899999999999999999998754
Q ss_pred ---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...++++||+++++|.+++... .++++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+||
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~--~~i~H~dl~p~ni~i~~~~~~~l~df 150 (264)
T cd06653 76 PEEKKLSIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHS--NMIVHRDIKGANILRDSAGNVKLGDF 150 (264)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEECcc
Confidence 3578899999999999998763 458899999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+++................|+..|+|||.+.+ ..+.++|+|||||++|+|++|..||............... +
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~--- 225 (264)
T cd06653 151 GASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQ--P--- 225 (264)
T ss_pred ccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcC--C---
Confidence 998865332111111234568999999997754 5788999999999999999999999865432211111100 0
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+..++..+.+++.+||. +|.+||++.+++.
T Consensus 226 -----~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 -----TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -----CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0111233455668899999999 5799999998764
No 289
>KOG4645|consensus
Probab=100.00 E-value=6.8e-39 Score=342.25 Aligned_cols=247 Identities=28% Similarity=0.397 Sum_probs=200.3
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
..+.+||.|.||.||.|... +|...|+|-++..... . .......+|+.++..+.|||+|+.||+-..
T Consensus 1238 qrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~----------k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1238 QRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-H----------KTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR 1306 (1509)
T ss_pred ccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-c----------ccCcchHHHHHHHHhccCccccccCceeecH
Confidence 45599999999999999865 4888999988754432 1 113447899999999999999999998766
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
+..+|.||||.+|+|.+.+.. +...++.....+..|++.|+.|||+ +|||||||||+||+|+.+|.+|++|||.|
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~--~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa 1381 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHE--HGIVHRDIKPANILLDFNGLIKYGDFGSA 1381 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHh--cCceecCCCccceeeecCCcEEeecccce
Confidence 788899999999999999886 3457777888899999999999999 89999999999999999999999999999
Q ss_pred ccccCCC-cccceeccCCCCCCcCCcccccCC----CCChhhHHHHHHHHHHHHcCCCCCCCCch--hhHHHHHHhcccc
Q psy520 331 KMSETSN-MKTMYTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYGVILLELLTGMKPIDDNNT--ILYYYLVVEQEVP 403 (455)
Q Consensus 331 ~~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~----~s~~sDi~SlGvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~ 403 (455)
....... ..........||+.|||||++.|. -..+.||||+|||++||+||+.||...+. ..++++......+
T Consensus 1382 ~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq 1461 (1509)
T KOG4645|consen 1382 VKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ 1461 (1509)
T ss_pred eEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCC
Confidence 8776542 112223567899999999988653 34589999999999999999999987663 3444444333333
Q ss_pred hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++ ..++..-++||..|+..||++|.++.|+++
T Consensus 1462 ~P------------~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1462 IP------------ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred Cc------------hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 22 236667889999999999999999988775
No 290
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5.8e-37 Score=294.79 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=193.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 249 (455)
|++.+.||+|+||.||+|.++ +++.||+|++..... ....|.+|+.+++++ .|+||+++++++.
T Consensus 8 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 73 (275)
T cd06608 8 FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--------------EEEEIKEEYNILRKYSNHPNIATFYGAFI 73 (275)
T ss_pred eeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--------------hHHHHHHHHHHHHHhcCCCChheEEEEEE
Confidence 455699999999999999986 478999999864321 134588999999999 6999999999875
Q ss_pred C-------cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 250 N-------IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
+ ...++||||+++++|.+++.... ....+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~--~~i~H~~l~p~ni~~~~~~~ 151 (275)
T cd06608 74 KKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE--NKVIHRDIKGQNILLTKNAE 151 (275)
T ss_pred ecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc--CCcccCCCCHHHEEEccCCe
Confidence 4 23789999999999999987643 23578999999999999999999999 88999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccccC------CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHH
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~ 395 (455)
+||+|||++....... .......|+..|+|||.+.+ .++.++|||||||++|+|++|..||..........
T Consensus 152 ~~l~d~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 228 (275)
T cd06608 152 VKLVDFGVSAQLDSTL---GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF 228 (275)
T ss_pred EEECCCccceecccch---hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence 9999999987654322 11234568999999997642 35678999999999999999999997544222111
Q ss_pred HHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... .... ......++..+.+||.+|+..||++||++.++++
T Consensus 229 ~~~~~--~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIPRN--PPPT-------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred Hhhcc--CCCC-------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111 0000 1112235567889999999999999999999975
No 291
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.2e-36 Score=289.94 Aligned_cols=247 Identities=24% Similarity=0.347 Sum_probs=194.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||+|+||.||++... ++..+|||.+....... . ....+.+|++++++++||||+++++.+..
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~-------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 70 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK----D-------ERLAAQNECQVLKLLSHPNIIEYYENFLE 70 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc----H-------HHHHHHHHHHHHhhCCCCchhheeeeEec
Confidence 455689999999999999876 47899999986432211 0 14558899999999999999999997665
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC-CceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl~DFG 328 (455)
...++||||+++++|.+++.... ...+++..+..++.+++.||.|||+ ++++||||||+||+++.+ +.+||+|||
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~~l~d~~ 147 (256)
T cd08220 71 DKALMIVMEYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHT--KLILHRDLKTQNILLDKHKMVVKIGDFG 147 (256)
T ss_pred CCEEEEEEecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEEccCC
Confidence 78899999999999999997643 3458999999999999999999999 899999999999999854 568999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... ......|+..|+|||.+.+ ..+.++|+||||+++|+|++|..||...+............. .
T Consensus 148 ~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-- 219 (256)
T cd08220 148 ISKILSSKS----KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF--A-- 219 (256)
T ss_pred CceecCCCc----cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC--C--
Confidence 988654332 1223568899999997754 468899999999999999999999987653222221111100 0
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....++..+.+++.+|+..+|.+||++.+++.
T Consensus 220 -------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 -------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 011224455888999999999999999999975
No 292
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.5e-36 Score=295.67 Aligned_cols=257 Identities=22% Similarity=0.285 Sum_probs=189.6
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|.+.+.||+|+||.||+|... +++.||+|.+........ ...+.+|+.+++.++|+||+++++++.
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------~~~~~~e~~~l~~l~h~ni~~~~~~~~ 73 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV------------PFTAIREASLLKGLKHANIVLLHDIIH 73 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCC------------cHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 4556699999999999999876 488999999865432110 223678999999999999999999877
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ ...|+||||+. ++|.+++.... ..+++.++..++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||
T Consensus 74 ~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 74 TKETLTFVFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHG--QHILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred cCCeEEEEEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHHEEEcCCCcEEEeccc
Confidence 7 78899999995 78877775432 357888999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc--ccc-
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ--EVP- 403 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~~- 403 (455)
+++...... .......++..|+|||.+.+ .++.++|+|||||++|||++|..||............... ..+
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (291)
T cd07870 149 LARAKSIPS---QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPT 225 (291)
T ss_pred cccccCCCC---CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCC
Confidence 987543321 11223457889999997754 4688999999999999999999999865532111110000 000
Q ss_pred ---------hhhhcchhh---------cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 ---------VREVLDKEA---------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ---------~~~~~d~~~---------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+....... ..+.....+..+.+++.+|+..||.+|||+.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 226 EDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000 00000111345778999999999999999999864
No 293
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=7e-37 Score=298.80 Aligned_cols=242 Identities=25% Similarity=0.399 Sum_probs=191.0
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
..||+|+||.||++... ++..||||.+..... . ....+.+|+.+++.++|+||+++++.+.. +..
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~ 94 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ------Q-------RRELLFNEVVIMRDYHHENVVDMYNSYLVGDEL 94 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchH------H-------HHHHHHHHHHHHHhCCCCcHHHHHHheecCCeE
Confidence 67999999999999876 488999999853221 1 14458899999999999999999997766 788
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++++|.+++.. ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||++...
T Consensus 95 ~lv~e~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 95 WVVMEFLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred EEEEeCCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 999999999999998854 358999999999999999999999 88999999999999999999999999998754
Q ss_pred cCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......|+..|+|||.+.+ .++.++|+||||+++|||++|..||............... +....
T Consensus 169 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-------~~~~~ 238 (292)
T cd06658 169 SKEV---PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN-------LPPRV 238 (292)
T ss_pred cccc---ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-------CCCcc
Confidence 3321 11223568899999997644 5788999999999999999999999865533221111110 00000
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
......+..+.+++.+|+..+|.+||+++++++.
T Consensus 239 --~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 239 --KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0111344568889999999999999999999863
No 294
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.1e-36 Score=296.84 Aligned_cols=256 Identities=22% Similarity=0.285 Sum_probs=192.4
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||.|+||.||+|.++. ++.||+|.++....... ....+.+|+.++.+++||||+++++++.+
T Consensus 8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 76 (293)
T cd07843 8 EKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEG-----------FPITSLREINILLKLQHPNIVTVKEVVVGS 76 (293)
T ss_pred hhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccccc-----------chhhHHHHHHHHHhcCCCCEEEEEEEEEec
Confidence 444899999999999999874 88999999975432110 12346789999999999999999997643
Q ss_pred --cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...|+||||+. ++|.+++.... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||
T Consensus 77 ~~~~~~lv~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili~~~~~~~l~d~g 151 (293)
T cd07843 77 NLDKIYMVMEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHD--NWILHRDLKTSNLLLNNRGILKICDFG 151 (293)
T ss_pred CCCcEEEEehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCHHHEEECCCCcEEEeecC
Confidence 67899999996 59999887643 368999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccchh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR 405 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~ 405 (455)
++........ ......+++.|+|||.+.+ ..+.++|+||||+++|||++|.+||.............. -..+..
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (293)
T cd07843 152 LAREYGSPLK---PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTE 228 (293)
T ss_pred ceeeccCCcc---ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCch
Confidence 9886554321 1123457889999997754 358899999999999999999999986653221111111 000000
Q ss_pred ------------------hhcchhh-cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 ------------------EVLDKEA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ------------------~~~d~~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....... ..++...++..+.++|.+||..+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 229 KIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000 11111114666889999999999999999999975
No 295
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.6e-37 Score=296.72 Aligned_cols=252 Identities=29% Similarity=0.357 Sum_probs=192.5
Q ss_pred CCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC--
Q psy520 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-- 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-- 250 (455)
..++||.|++|.||+|.+.+ ++.||+|.+...... .....+.+|++++++++||||+++++++.+
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 72 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP------------DLQKQILRELEINKSCKSPYIVKYYGAFLDES 72 (287)
T ss_pred EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch------------HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC
Confidence 44889999999999999864 789999998643210 013458899999999999999999997754
Q ss_pred -cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++||||+++++|.+++.... ....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~--~~i~H~dl~~~nil~~~~~~~~l~dfg 150 (287)
T cd06621 73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS--RKIIHRDIKPSNILLTRKGQVKLCDFG 150 (287)
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEecCCeEEEeecc
Confidence 46789999999999999876432 24568999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCch---hhHHHHHHhcccch
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNT---ILYYYLVVEQEVPV 404 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~---~~~~~~~~~~~~~~ 404 (455)
++....... .....++..|+|||.+. +.++.++|+|||||++|+|++|..||..... ..............
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd06621 151 VSGELVNSL-----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN 225 (287)
T ss_pred ccccccccc-----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc
Confidence 987543321 12346788999999664 4678899999999999999999999986532 00000000011011
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+.. .....++..+.+++.+|+..+|.+||++.|++.
T Consensus 226 ~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 226 PELKDEP---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hhhccCC---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1110000 001234567889999999999999999999987
No 296
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=9.5e-37 Score=295.82 Aligned_cols=242 Identities=21% Similarity=0.273 Sum_probs=183.0
Q ss_pred cccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHH---HHHcCCCcceecccccccC-c
Q psy520 177 KLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ---TLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~-~ 251 (455)
.||+|+||.||++.... ++.||+|.+.......... ...+.+|.. ++....||||+.+++++.. +
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 70 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG----------ETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD 70 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH----------HHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC
Confidence 48999999999999864 8899999987543311110 112334443 3444579999999987765 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++|+|.+++.. ...+++.++..++.|++.||.|||+ .+++||||||+|||++.++.++|+|||++.
T Consensus 71 ~~~lv~e~~~~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~--~~ivH~dikp~Nil~~~~~~~~l~dfg~~~ 145 (279)
T cd05633 71 KLCFILDLMNGGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLAC 145 (279)
T ss_pred eEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCcCCCCCCHHHEEECCCCCEEEccCCcce
Confidence 88999999999999999876 3469999999999999999999999 889999999999999999999999999987
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-C-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-C-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
...... .....||..|+|||.+. + .++.++|+|||||++|||++|..||............... ..
T Consensus 146 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~------ 213 (279)
T cd05633 146 DFSKKK-----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LT------ 213 (279)
T ss_pred eccccC-----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh-hc------
Confidence 543221 12346899999999764 3 4688999999999999999999999754321111111000 00
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
.....+..++..+.++|.+|+..||.+|| +++++++
T Consensus 214 --~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 214 --VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred --CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 00011223455688899999999999999 5988876
No 297
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=9.2e-37 Score=296.03 Aligned_cols=258 Identities=25% Similarity=0.313 Sum_probs=194.2
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.+++ ++.||||+++....... ....+.+|++++++++|+||+++++++.+
T Consensus 3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~-----------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 71 (288)
T cd07833 3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDED-----------VKKTALREVKVLRQLRHENIVNLKEAFRR 71 (288)
T ss_pred eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccccc-----------chhHHHHHHHHHHhcCCCCeeehhheEEE
Confidence 4566899999999999999874 78999999865332111 13458899999999999999999998876
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||++++.+..+... ...+++.++..++.+++.||.|||+ .+++|+||+|+||++++++.+||+|||+
T Consensus 72 ~~~~~iv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 72 KGRLYLVFEYVERTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYCHS--HNIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred CCEEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEEeeec
Confidence 778999999988766655544 3458999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cccch-
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVPV- 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~~- 404 (455)
+........ .......++..|+|||++.+ ..+.++|+||||+++|+|++|.+||.............. .....
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (288)
T cd07833 147 ARALRARPA--SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPS 224 (288)
T ss_pred ccccCCCcc--ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 887654431 11234578889999997644 467899999999999999999999986543221111110 00000
Q ss_pred ----------------hhhcchh-hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 ----------------REVLDKE-AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ----------------~~~~d~~-~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+.. .....+..++..+.+||.+|+..+|++||+++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 225 HQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000000 000111223667889999999999999999999875
No 298
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.3e-36 Score=296.42 Aligned_cols=259 Identities=20% Similarity=0.272 Sum_probs=190.9
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
|++.+.||+|+||.||+|.+. +++.||||+++....... ....+.+|+.+++++. ||||+++++++.
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~ 71 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEG-----------IPPTALREISLLQMLSESIYIVRLLDVEH 71 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccC-----------CchHHHHHHHHHHHccCCCCccceeeeEe
Confidence 455589999999999999986 489999999865432111 1234788999999995 699999999775
Q ss_pred C-cc-----eeEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC-CC
Q psy520 250 N-IM-----NCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NF 320 (455)
Q Consensus 250 ~-~~-----~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~-~~ 320 (455)
. .. .++||||+++ +|.+++..... ...+++..++.++.|++.||.|||+ ++++||||||+||+++. ++
T Consensus 72 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~~~nil~~~~~~ 148 (295)
T cd07837 72 VEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK--HGVMHRDLKPQNLLVDKQKG 148 (295)
T ss_pred ecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChHHEEEecCCC
Confidence 5 33 6899999975 89888865432 3468999999999999999999999 89999999999999998 89
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHH
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
.+||+|||+++....... ......+++.|+|||.+.+ .++.++|+||||+++|+|++|..||.............
T Consensus 149 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~ 225 (295)
T cd07837 149 LLKIADLGLGRAFSIPVK---SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF 225 (295)
T ss_pred eEEEeecccceecCCCcc---ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 999999999875533211 1123356888999997643 46889999999999999999999998765332222211
Q ss_pred hc-ccchhhhcc----hh----hcCCC-------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 399 EQ-EVPVREVLD----KE----AGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~~-~~~~~~~~d----~~----~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ..+...... .. ...+. ...++..+.++|.+||..+|.+||++.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 10 000000000 00 00000 1234566888999999999999999999874
No 299
>KOG0667|consensus
Probab=100.00 E-value=2.7e-37 Score=313.11 Aligned_cols=253 Identities=25% Similarity=0.353 Sum_probs=197.7
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Cc-----ceec
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HV-----NLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~ 243 (455)
.|++.+.||+|+||.|.+|.+. +++.||||+++..... ..+-..|+.+|..++ |. |+|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f--------------~~Q~~~Ei~iL~~ln~~d~~~~~n~Vr 252 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF--------------LRQAQIEIRILELLNKHDPDDKYNIVR 252 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH--------------HHHHHHHHHHHHHHhccCCCCCeeEEE
Confidence 3578899999999999999876 4899999999865431 344667999999997 43 9999
Q ss_pred ccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC--C
Q psy520 244 LLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN--F 320 (455)
Q Consensus 244 l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~--~ 320 (455)
+++++.- ++.|||+|.+ ..+|.+++.... ..+++...++.|+.||+.||.+||+ .+|||+||||+||||..- .
T Consensus 253 m~d~F~fr~HlciVfELL-~~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~--l~IIHcDLKPENILL~~~~r~ 328 (586)
T KOG0667|consen 253 MLDYFYFRNHLCIVFELL-STNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHE--LGIIHCDLKPENILLKDPKRS 328 (586)
T ss_pred eeeccccccceeeeehhh-hhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCChhheeeccCCcC
Confidence 9998766 9999999999 789999998754 3569999999999999999999999 789999999999999643 4
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 399 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~ 399 (455)
.+||+|||.+++...... ....++-|.|||++ ...++.+.||||||||++||++|.+.|.+.+.......+.+
T Consensus 329 ~vKVIDFGSSc~~~q~vy------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e 402 (586)
T KOG0667|consen 329 RIKVIDFGSSCFESQRVY------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIE 402 (586)
T ss_pred ceeEEecccccccCCcce------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHH
Confidence 899999999987654321 44678889999966 55789999999999999999999999988875544444322
Q ss_pred -cccchhh----------hcch--------------------------------hhcC-----CC---hhHHHHHHHHHH
Q psy520 400 -QEVPVRE----------VLDK--------------------------------EAGE-----WN---ETHVETLISIVF 428 (455)
Q Consensus 400 -~~~~~~~----------~~d~--------------------------------~~~~-----~~---~~~~~~~l~~Li 428 (455)
-..+... +++. .... +. ...-...+.+||
T Consensus 403 ~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dfl 482 (586)
T KOG0667|consen 403 VLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFL 482 (586)
T ss_pred HhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHH
Confidence 1111111 1111 0000 00 012345678999
Q ss_pred HHhcccCcCCCCCHHHHHH
Q psy520 429 EKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 429 ~~~l~~dp~~RPs~~evl~ 447 (455)
.+|+..||.+|+|..+.++
T Consensus 483 k~~L~~dP~~R~tp~qal~ 501 (586)
T KOG0667|consen 483 KRCLEWDPAERITPAQALN 501 (586)
T ss_pred HHHhccCchhcCCHHHHhc
Confidence 9999999999999999875
No 300
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=7.7e-37 Score=292.08 Aligned_cols=248 Identities=27% Similarity=0.366 Sum_probs=193.5
Q ss_pred ccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||.||++.+.. |+.||+|.+....... ......+.+|++++++++||||+++++.+.. ...|+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~----------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 70 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR----------KNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYL 70 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh----------hhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEE
Confidence 6999999999999875 8999999986432211 1124558899999999999999999997766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
+|||+++++|.+++.+. ..+++..+..++.|++.||+|||+ .+++||||+|+||+++.++.++|+|||++.....
T Consensus 71 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~--~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~ 145 (265)
T cd05579 71 VMEYLPGGDLASLLENV---GSLDEDVARIYIAEIVLALEYLHS--NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLV 145 (265)
T ss_pred EEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--cCeecCCCCHHHeEEcCCCCEEEEecccchhccc
Confidence 99999999999999874 368999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcc-----cceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 336 SNMK-----TMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 336 ~~~~-----~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
.... ........++..|+|||.. ....+.++|+||||+++|++++|..||...................+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 222 (265)
T cd05579 146 RRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE--- 222 (265)
T ss_pred CcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCc---
Confidence 3210 1122345688899999966 445788999999999999999999999876543322222211111110
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
....+..+.+++.+|+..+|.+||++..+.+.|+
T Consensus 223 -------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 223 -------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0112556888999999999999999966655543
No 301
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.2e-36 Score=292.53 Aligned_cols=244 Identities=27% Similarity=0.433 Sum_probs=194.0
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..++||+|+||.||+|.++ ++..||||.+..... . .....|.+|+.++++++||||+++++++.+
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 73 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA------E------DEIEDIQQEITVLSQCDSPYVTKYYGSYLK 73 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc------h------HHHHHHHHHHHHHHhcCCCCEeEEEEEEEe
Confidence 445588999999999999875 478999998753221 0 013458899999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++.. ..+++..+..++.+++.|+.|||+ .+++|+||||+||+++.++.++|+|||+
T Consensus 74 ~~~~~lv~e~~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~Ni~i~~~~~~~l~dfg~ 147 (277)
T cd06641 74 DTKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS--EKKIHRDIKAANVLLSEHGEVKLADFGV 147 (277)
T ss_pred CCeEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHcc--CCeecCCCCHHhEEECCCCCEEEeeccc
Confidence 788999999999999998864 358999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... .......|+..|+|||.+. ...+.++|+|||||++|+|++|..||...........+.....
T Consensus 148 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------ 218 (277)
T cd06641 148 AGQLTDTQ---IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP------ 218 (277)
T ss_pred ceecccch---hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCC------
Confidence 87654321 1123356888999999764 4578899999999999999999999976553322222211110
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......++..+.+++.+|+..+|.+||++.++++
T Consensus 219 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 219 -----PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred -----CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0011234455888999999999999999999988
No 302
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.5e-36 Score=292.66 Aligned_cols=242 Identities=21% Similarity=0.268 Sum_probs=183.6
Q ss_pred cccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHH---HHHHHcCCCcceecccccccC-c
Q psy520 177 KLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENE---VQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
.||+|+||.||++... +++.||+|.+.......... ...+..| +..++...||||+.+++++.+ +
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 70 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG----------ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 70 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh----------HHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence 4899999999999875 47899999987543211100 1112333 345555689999999997766 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+||||++||+|.+++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 71 ~~~~v~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~nili~~~~~~kl~dfg~~~ 145 (278)
T cd05606 71 KLSFILDLMNGGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLAC 145 (278)
T ss_pred EEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCEEcCCCCHHHEEECCCCCEEEccCcCcc
Confidence 88999999999999998876 3469999999999999999999999 889999999999999999999999999987
Q ss_pred cccCCCcccceeccCCCCCCcCCccccc-C-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-C-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
...... .....|+..|+|||.+. + .++.++||||+||++|||++|..||................
T Consensus 146 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------- 212 (278)
T cd05606 146 DFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-------- 212 (278)
T ss_pred ccCccC-----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh--------
Confidence 543221 22347899999999775 3 47889999999999999999999998653211111100000
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
.....+ +...+..+.+++.+|+..+|.+|| ++.++++
T Consensus 213 ~~~~~~-~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 213 TMAVEL-PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ccCCCC-CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 000011 112355688899999999999999 9999875
No 303
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.6e-36 Score=290.58 Aligned_cols=241 Identities=26% Similarity=0.358 Sum_probs=191.5
Q ss_pred ccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||.|+||.||+|++.. ++.||+|++........ ...+.+.+|+.++++++||||+++++++.+ ...++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 70 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET----------GQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYM 70 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh----------hHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEE
Confidence 7999999999999874 88999999975432111 013558899999999999999999998766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
|+||+++++|.+++... ..+++..+..++.|++.||.|||+ ++++|+||||+||+++.++.++|+|||++.....
T Consensus 71 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~--~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 71 LMEYCLGGELWTILRDR---GLFDEYTARFYIACVVLAFEYLHN--RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred EEecCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 99999999999999873 458999999999999999999999 8999999999999999999999999999886644
Q ss_pred CCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCc--hhhHHHHHHhcccchhhhcchhh
Q psy520 336 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNN--TILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.. ......|+..|+|||.+. ..++.++|+||||+++|+|++|..||.... ............. .
T Consensus 146 ~~----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------~ 212 (262)
T cd05572 146 GQ----KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG---------K 212 (262)
T ss_pred cc----ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC---------C
Confidence 32 123457889999999764 457889999999999999999999998765 2221111110000 0
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCCC-----HHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
.. .+...+..+.++|.+||..+|++||+ ++|+++
T Consensus 213 ~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 213 LE-FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CC-CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 01 11122556889999999999999999 777765
No 304
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.8e-37 Score=293.02 Aligned_cols=247 Identities=25% Similarity=0.280 Sum_probs=195.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||+|.++ +++.||+|.+........ .....+.+|++++++++||||+++++++.+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 71 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEK----------GSVRNVLNERRILQELNHPFLVNLWYSFQD 71 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcch----------hHHHHHHHHHHHHHhCCCCChHHHHHhhcC
Confidence 455689999999999999987 489999999975432111 114568899999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+.+++|.+++... .++++..+..++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||+
T Consensus 72 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 72 EENMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHS--KGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred CCeEEEEEeCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 7889999999999999999873 478999999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... ......|+..|+|||.+.+ ..+.++|+||||+++|+|++|..||...+.............
T Consensus 147 ~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------ 216 (258)
T cd05578 147 ATKVTPDT----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------ 216 (258)
T ss_pred ccccCCCc----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc------
Confidence 87654332 1234568889999997654 568899999999999999999999987663211111111000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCH--HHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASM--RDIV 446 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~--~evl 446 (455)
.....+..++..+.++|.+|+..+|.+||++ ++++
T Consensus 217 ---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 ---ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ---ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0011112345668889999999999999999 6554
No 305
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2e-36 Score=296.81 Aligned_cols=260 Identities=22% Similarity=0.307 Sum_probs=189.0
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|..+ +++.||||++........ ....+.+|++++++++||||+++++++..
T Consensus 14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 82 (310)
T cd07865 14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEG-----------FPITALREIKILQLLKHENVVNLIEICRT 82 (310)
T ss_pred eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCC-----------chhHHHHHHHHHHhCCCCCccceEEEEec
Confidence 455589999999999999986 488999999864322111 02235689999999999999999997654
Q ss_pred -c--------ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 251 -I--------MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 251 -~--------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
. ..++||||+. ++|.+.+.... ..+++.+++.++.|++.||.|||+ ++++|+||||+||+++.++.
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dl~p~nil~~~~~~ 157 (310)
T cd07865 83 KATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHR--NKILHRDMKAANILITKDGI 157 (310)
T ss_pred ccccccCCCceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEECCCCc
Confidence 2 3489999995 68888876532 368999999999999999999999 88999999999999999999
Q ss_pred eEEccccccccccCCCcc-cceeccCCCCCCcCCcccccCC--CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHH
Q psy520 322 PKLGDFGIVKMSETSNMK-TMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~--~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
+||+|||++......... ........++..|+|||.+.+. .+.++|+||||+++|||++|.+||.............
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~ 237 (310)
T cd07865 158 LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLIS 237 (310)
T ss_pred EEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999998865433211 1112345678899999976543 5789999999999999999999997665321111111
Q ss_pred h--cccch---hhh-----cch---------hh-cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 399 E--QEVPV---REV-----LDK---------EA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~--~~~~~---~~~-----~d~---------~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. +..+. +.. .+. .. ...........+.+||.+||..||.+||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 238 QLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 1 00000 000 000 00 00000011234678999999999999999999875
No 306
>KOG4278|consensus
Probab=100.00 E-value=1.9e-37 Score=309.08 Aligned_cols=251 Identities=29% Similarity=0.476 Sum_probs=208.2
Q ss_pred CCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
..++||-|.||.||.|.|+. .-.||||.++.+. +..+.|+.|..+|+.++|||+|+++|.|.. .
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt--------------MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcc--------------hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 35899999999999999985 6789999997432 236679999999999999999999999977 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.+|||.|||+.|+|.++|++..+ ..++....+.++.||+.|+.||.. +++|||||-..|.|+.++..+||+||||++
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEk--knFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHH--hhhhhhhhhhhhccccccceEEeeccchhh
Confidence 88999999999999999998765 457778888999999999999999 899999999999999999999999999999
Q ss_pred cccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
+...+.... .....-...|.|||-+ ...++.|||||+|||+|||+.| |..||.+.+....+...+
T Consensus 414 lMtgDTYTA--HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLE----------- 480 (1157)
T KOG4278|consen 414 LMTGDTYTA--HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLE----------- 480 (1157)
T ss_pred hhcCCceec--ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHh-----------
Confidence 887654221 1223345679999955 5678999999999999999999 999999877444333332
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+...-..+..|+..+.+|+..||.+.|.+||+++|+-+.|+.++.
T Consensus 481 kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 481 KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 112222344566668888999999999999999999999998764
No 307
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-36 Score=297.22 Aligned_cols=257 Identities=23% Similarity=0.320 Sum_probs=191.8
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.++. |+.||+|+++........ ...+.+|+.++++++|+||+++++++.+
T Consensus 9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 77 (309)
T cd07845 9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGI-----------PISSLREITLLLNLRHPNIVELKEVVVG 77 (309)
T ss_pred eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCC-----------cchhhHHHHHHHhCCCCCCcceEEEEec
Confidence 4556899999999999999864 899999998754321110 1235689999999999999999997754
Q ss_pred ---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...++||||+. ++|.+++.... ..+++.++..++.|++.||+|||+ .|++||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~~lv~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~kL~df 152 (309)
T cd07845 78 KHLDSIFLVMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHE--NFIIHRDLKVSNLLLTDKGCLKIADF 152 (309)
T ss_pred CCCCeEEEEEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEECcc
Confidence 45789999995 58988887643 468999999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccch
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPV 404 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~ 404 (455)
|++........ ......++..|+|||.+.+ .++.++|+|||||++|||++|.+||...+.......+.. ...+.
T Consensus 153 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~ 229 (309)
T cd07845 153 GLARTYGLPAK---PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPN 229 (309)
T ss_pred ceeeecCCccC---CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99886543321 1122345788999997644 468899999999999999999999987664333222221 00000
Q ss_pred hhhc---ch-------hh--cCCC-----hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 REVL---DK-------EA--GEWN-----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~---d~-------~~--~~~~-----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.... +. .. .... ....+..+.++|.+|+..||++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 230 ESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 00 00 0000 0113556788999999999999999999875
No 308
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1e-36 Score=299.94 Aligned_cols=263 Identities=21% Similarity=0.282 Sum_probs=191.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC---CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
|++.++||+|+||.||+|..+. ++.||+|.+......... ....+.+|+.++++++||||+++++++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~----------~~~~~~~e~~~l~~l~h~~i~~~~~~~ 71 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTG----------ISQSACREIALLRELKHENVVSLVEVF 71 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccC----------ccHHHHHHHHHHHhcCCCCccceEEEE
Confidence 4556889999999999999854 689999999764321111 123477899999999999999999977
Q ss_pred cC---cceeEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC----C
Q psy520 249 NN---IMNCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE----N 319 (455)
Q Consensus 249 ~~---~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~----~ 319 (455)
.+ ...++||||+. ++|.+.+..... ...+++..+..++.|++.||.|||+ .+++||||||+||+++. +
T Consensus 72 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~i~h~dlkp~Nil~~~~~~~~ 148 (316)
T cd07842 72 LEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS--NWVLHRDLKPANILVMGEGPER 148 (316)
T ss_pred eCCCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEEcCCCCcc
Confidence 54 46789999995 577777754332 2368999999999999999999999 88999999999999999 9
Q ss_pred CceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhh-----
Q psy520 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTIL----- 392 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~----- 392 (455)
+.+||+|||++.................++..|+|||.+.+ .++.++|+|||||++|+|++|.+||.......
T Consensus 149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~ 228 (316)
T cd07842 149 GVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNP 228 (316)
T ss_pred ceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccch
Confidence 99999999998865443221222234578899999996644 46889999999999999999999997654221
Q ss_pred -----HHHH-HHhcccc---------hhhhcc---hhh-cCCC--------hh--HHHHHHHHHHHHhcccCcCCCCCHH
Q psy520 393 -----YYYL-VVEQEVP---------VREVLD---KEA-GEWN--------ET--HVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 393 -----~~~~-~~~~~~~---------~~~~~d---~~~-~~~~--------~~--~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
.... ....... .+++.. ... ...+ .. ..+..+.+++.+||..||++||++.
T Consensus 229 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ 308 (316)
T cd07842 229 FQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAE 308 (316)
T ss_pred hHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHH
Confidence 0000 0000000 000000 000 0000 00 2334577899999999999999999
Q ss_pred HHHH
Q psy520 444 DIVD 447 (455)
Q Consensus 444 evl~ 447 (455)
|+++
T Consensus 309 eil~ 312 (316)
T cd07842 309 EALE 312 (316)
T ss_pred HHhc
Confidence 9875
No 309
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.8e-36 Score=290.81 Aligned_cols=254 Identities=22% Similarity=0.320 Sum_probs=189.1
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
|++.++||+|+||.||+|..+ +++.||+|+++....... .....+|+.++.++. |+|++++++++.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~------------~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 68 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE------------QVNNLREIQALRRLSPHPNILRLIEVLF 68 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch------------hhhHHHHHHHHhhcCCCCCccceEEEEe
Confidence 345688999999999999976 488999999865322110 112457899999885 999999999765
Q ss_pred C---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 250 N---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 250 ~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+ +..++|+||+. |+|.+.+.... ..+++.++..++.|++.||+|||+ .+++||||||+||+++. +.+||+|
T Consensus 69 ~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~p~ni~l~~-~~~kl~d 142 (282)
T cd07831 69 DRKTGRLALVFELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHR--NGIFHRDIKPENILIKD-DILKLAD 142 (282)
T ss_pred cCCCCcEEEEEecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCceecccCHHHEEEcC-CCeEEEe
Confidence 4 57799999996 68888887532 468999999999999999999999 89999999999999999 9999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccc-c-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccc
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-H-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVP 403 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~ 403 (455)
||+++....... .....++..|+|||.+ . +..+.++|+|||||++|||++|.+||...+.......... ....
T Consensus 143 fg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~ 218 (282)
T cd07831 143 FGSCRGIYSKPP----YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTP 218 (282)
T ss_pred cccccccccCCC----cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCC
Confidence 999876543321 1234678899999965 3 3468899999999999999999999987653322221111 0000
Q ss_pred hhhh---cchh-hcC--CC----------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 VREV---LDKE-AGE--WN----------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~---~d~~-~~~--~~----------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.... .... ... ++ ...++..+.++|.+||..+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 219 DAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000 0000 000 00 1234677899999999999999999999875
No 310
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.5e-36 Score=302.03 Aligned_cols=259 Identities=21% Similarity=0.329 Sum_probs=193.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|..+. |+.||+|++........ ....+.+|+.++++++||||+++++++..
T Consensus 7 y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 75 (334)
T cd07855 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPT-----------LAKRTLRELKILRHFKHDNIIAIRDILRP 75 (334)
T ss_pred eeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccccc-----------chHHHHHHHHHHHhcCCCCccCHHHhccc
Confidence 4455899999999999999864 89999999865322110 13447789999999999999999986532
Q ss_pred -----cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEc
Q psy520 251 -----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 251 -----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
...++||||+. ++|.+++.. ...+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+
T Consensus 76 ~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~Nil~~~~~~~kl~ 149 (334)
T cd07855 76 PGADFKDVYVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHS--ANVIHRDLKPSNLLVNEDCELRIG 149 (334)
T ss_pred cCCCCceEEEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEec
Confidence 46789999994 689888875 3459999999999999999999999 889999999999999999999999
Q ss_pred cccccccccCCCcc-cceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cc
Q psy520 326 DFGIVKMSETSNMK-TMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QE 401 (455)
Q Consensus 326 DFGla~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~ 401 (455)
|||++......... ........|+..|+|||.+.+ .++.++|||||||++|||++|..||...+.......... ..
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g 229 (334)
T cd07855 150 DFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG 229 (334)
T ss_pred ccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhC
Confidence 99998765432211 111234578999999997643 478899999999999999999999987653222111111 11
Q ss_pred cchhhhc------------chhh--cCCC----hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 402 VPVREVL------------DKEA--GEWN----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~~~------------d~~~--~~~~----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+....+ +... ...+ ....+..+.++|.+||..+|.+||++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 230 SPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred CChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1111111 1000 0000 0224566899999999999999999999876
No 311
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.6e-36 Score=292.04 Aligned_cols=245 Identities=22% Similarity=0.279 Sum_probs=188.3
Q ss_pred ccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||+||++..+ +|+.||+|.+........ .....+.+|++++++++||||+++++.+.. +..|+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 70 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----------KGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCL 70 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh----------hhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEE
Confidence 699999999999876 488999999865322111 013457789999999999999999987766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||+++++|.+++..... ..+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 71 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~ 147 (277)
T cd05577 71 VMTLMNGGDLKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQ--RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG 147 (277)
T ss_pred EEecCCCCcHHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEccCcchhhhcc
Confidence 9999999999999976442 468999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcC
Q psy520 336 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGE 414 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 414 (455)
.. ......++..|+|||.+. +.++.++|+|||||++|+|++|..||.................. .. .
T Consensus 148 ~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~-~ 215 (277)
T cd05577 148 GK----KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-------MA-V 215 (277)
T ss_pred CC----ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-------cc-c
Confidence 21 122346788999999764 45788999999999999999999999765431111111100000 00 0
Q ss_pred CChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 415 WNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 415 ~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..+...+..+.++|.+||..+|.+|| ++.++++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 01122345588999999999999999 6666654
No 312
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.8e-36 Score=287.58 Aligned_cols=248 Identities=26% Similarity=0.358 Sum_probs=194.5
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|..+. |..||+|.+........ ....+.+|+++++.++|+||+++++.+.+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------~~~~~~~E~~~l~~~~h~~i~~~~~~~~~ 70 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVK-----------EKEASKKEVILLAKMKHPNIVTFFASFQE 70 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccch-----------hhHHHHHHHHHHHhCCCCChhhhhheecc
Confidence 3456899999999999999874 78999999865322110 13457899999999999999999998777
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC-ceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-VPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~-~~kl~DFG 328 (455)
...++|+||+++++|.+++.... ...+++..+..++.|++.||.|||+ .+++|+||||+||++++++ .+||+|||
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~nil~~~~~~~~~l~d~~ 147 (257)
T cd08225 71 NGRLFIVMEYCDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHD--RKILHRDIKSQNIFLSKNGMVAKLGDFG 147 (257)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCcccccCCHHHEEEcCCCCeEEecccc
Confidence 78899999999999999997643 2458999999999999999999999 8899999999999999885 56999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
.+....... .......|++.|+|||.+. +..+.++|+||||+++|||++|..||............... ..
T Consensus 148 ~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~--- 219 (257)
T cd08225 148 IARQLNDSM---ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG--YF--- 219 (257)
T ss_pred cchhccCCc---ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--cC---
Confidence 987654322 1122346899999999764 45788999999999999999999999765432222111111 00
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. .....++..+.+++.+||..+|.+||++.++++
T Consensus 220 -~-----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 220 -A-----PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -C-----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0 011233456888999999999999999999975
No 313
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.5e-36 Score=288.93 Aligned_cols=244 Identities=20% Similarity=0.304 Sum_probs=186.2
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHH-HHcCCCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT-LSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.... ++.||||++........ .....+..|..+ ....+|+|++++++++.+ ..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 71 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAK----------NQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDY 71 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHH----------HHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCe
Confidence 569999999999999864 88999999864321100 001224455544 445589999999998876 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++|+||+++++|.+++... .++++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+++.
T Consensus 72 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 146 (260)
T cd05611 72 LYLVMEYLNGGDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQ--RGIIHRDIKPENLLIDQTGHLKLTDFGLSRN 146 (260)
T ss_pred EEEEEeccCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCcEEEeeccccee
Confidence 89999999999999999763 468999999999999999999999 8899999999999999999999999998875
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
... .....|+..|+|||.+.+ .++.++||||||+++|+|++|..||....................
T Consensus 147 ~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 213 (260)
T cd05611 147 GLE-------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWP------ 213 (260)
T ss_pred ccc-------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCC------
Confidence 432 223568889999997654 468899999999999999999999987654333222221111100
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
......++..+.+++.+||..+|++||++.++.+.|
T Consensus 214 --~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 214 --EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred --CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 001113456688999999999999999776555443
No 314
>KOG0586|consensus
Probab=100.00 E-value=4.4e-37 Score=308.79 Aligned_cols=250 Identities=25% Similarity=0.388 Sum_probs=205.1
Q ss_pred CCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecc
Q psy520 166 FNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 166 f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
-.....|.+...||+|.|+.|.+|++. ++..||||.+.+..... .....+.+|+++++.+.|||||++
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-----------~~~~k~~rev~imk~l~HPnIvkl 120 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-----------SKRQKLGREVDIMKSLNHPNIVKL 120 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-----------HHHHHHHHHHHHHHhcCCcceeee
Confidence 334456677899999999999999976 48999999997654311 124458899999999999999999
Q ss_pred cccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 245 LGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
+.+... ...++||||+.+|.+++++...+ ...+..+..++.|+.+|++|||+ ++|||||||.+||||+.+..+|
T Consensus 121 ~~v~~t~~~lylV~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~--k~ivHrdLk~eNilL~~~mnik 195 (596)
T KOG0586|consen 121 FSVIETEATLYLVMEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHS--KNIVHRDLKAENILLDENMNIK 195 (596)
T ss_pred eeeeeecceeEEEEEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhh--cceeccccchhhccccccccee
Confidence 998876 88999999999999999999854 46778899999999999999999 8999999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCcccccCC--CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcc
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 401 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 401 (455)
|+|||++.++.... .....+|++.|.|||++.|. ..+.+|+||+|+|+|-|+.|..||++..-.........+.
T Consensus 196 IaDfgfS~~~~~~~----~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk 271 (596)
T KOG0586|consen 196 IADFGFSTFFDYGL----MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK 271 (596)
T ss_pred eeccccceeecccc----cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee
Confidence 99999998876433 34578999999999999775 3679999999999999999999999876332222222222
Q ss_pred cchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 402 VPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..++-+ ++....++|.+++..+|.+|++++++.+
T Consensus 272 ~rIp~~------------ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 272 YRIPFY------------MSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ecccce------------eechhHHHHHHhhccCccccCCHHHhhh
Confidence 222222 3334777888999999999999998854
No 315
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.9e-36 Score=293.34 Aligned_cols=257 Identities=24% Similarity=0.333 Sum_probs=190.5
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||+|.++. |+.||||+++....... ....+.+|++++++++||||+++++++.+
T Consensus 10 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~ 78 (302)
T cd07864 10 DIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-----------FPITAIREIKILRQLNHRNIVNLKEIVTDK 78 (302)
T ss_pred heeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-----------chHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence 445899999999999999874 88999999875432111 12346789999999999999999997755
Q ss_pred c----------ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 251 I----------MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 251 ~----------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
. ..++|+||+++ +|.+.+... ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili~~~~ 153 (302)
T cd07864 79 QDALDFKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHK--KNFLHRDIKCSNILLNNKG 153 (302)
T ss_pred chhhhccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCC
Confidence 2 67899999965 777777653 3468999999999999999999999 8899999999999999999
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHH
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
.+||+|||++......... ......++..|+|||.+.+ ..+.++|||||||++|||++|++||.............
T Consensus 154 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~ 231 (302)
T cd07864 154 QIKLADFGLARLYNSEESR--PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELIS 231 (302)
T ss_pred cEEeCcccccccccCCccc--ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 9999999998765443211 1122356788999997643 36889999999999999999999998665322211111
Q ss_pred h--cccch---hhh--------cchhhc---C--CChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 399 E--QEVPV---REV--------LDKEAG---E--WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~--~~~~~---~~~--------~d~~~~---~--~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ..... +.. .+.... . .....++..+.+++.+||..+|.+||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 11000 000 000000 0 001124567889999999999999999999875
No 316
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.6e-36 Score=293.43 Aligned_cols=248 Identities=26% Similarity=0.314 Sum_probs=186.7
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-CcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-~~ 252 (455)
++||+|+||.||++.+.. ++.||+|++...... .....+.+|+.++.++. |+||+++++++.. ..
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~ 77 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE------------KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGD 77 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccCh------------HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCc
Confidence 789999999999999864 899999998643221 11445889999999996 9999999997766 77
Q ss_pred eeEEEEeccCCCHHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARV--NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.+++|||+. ++|.++.... .....+++..+..++.+++.||+|||+. .+++||||||+||+++.++.+||+|||++
T Consensus 78 ~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 78 CWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE-LKIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred EEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc-CCeeccCCCHHHEEEccCCcEEEeecchh
Confidence 789999984 5665543221 1135799999999999999999999972 38999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+....... .....|+..|+|||.+.+ .++.++|||||||++|||++|..||................ ..
T Consensus 156 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~-- 228 (288)
T cd06616 156 GQLVDSIA----KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG-DP-- 228 (288)
T ss_pred HHhccCCc----cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC-CC--
Confidence 76543221 123468899999997754 37889999999999999999999997654211111110000 00
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+.........++..+.+|+.+|+..+|.+||++++|+.
T Consensus 229 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 229 ---PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred ---CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00111111235566889999999999999999999876
No 317
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.1e-36 Score=297.51 Aligned_cols=258 Identities=18% Similarity=0.273 Sum_probs=189.4
Q ss_pred Cccccc--CCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 176 NKLGEG--QFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 176 ~~LG~G--~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
..||+| +||+||++.+. +|+.||||++...... . ...+.+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-----~------~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~ 72 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-----E------EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS 72 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-----H------HHHHHHHHHHHHHHhCCCCCcceEeeeEecCC
Confidence 456666 99999999986 4899999998643221 1 013568899999999999999999998877 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++|+||+.+++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+|++||+.+.
T Consensus 73 ~~~~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~--~~ivHrDlkp~Nill~~~~~~~~~~~~~~~ 149 (328)
T cd08226 73 WLWVISPFMAYGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQ--NGYIHRNIKASHILISGDGLVSLSGLSHLY 149 (328)
T ss_pred ceEEEEecccCCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEeCCCcEEEechHHHh
Confidence 8899999999999999988643 2358999999999999999999999 899999999999999999999999998654
Q ss_pred cccCCCcc-c---ceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccch
Q psy520 332 MSETSNMK-T---MYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 332 ~~~~~~~~-~---~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
........ . .......++..|+|||++.+ .++.++|||||||++|||++|..||...................
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 229 (328)
T cd08226 150 SLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYS 229 (328)
T ss_pred hhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCC
Confidence 32211100 0 00112245677999997754 36789999999999999999999998765322111111000000
Q ss_pred h-----------------------------------hhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 R-----------------------------------EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~-----------------------------------~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+ ...+..........++..+.+|+.+||..||++|||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 230 PLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred CccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 000000011112345667889999999999999999999974
No 318
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.7e-36 Score=290.71 Aligned_cols=241 Identities=24% Similarity=0.392 Sum_probs=191.5
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|++|.||++..+ +++.||+|+++.... . ....+.+|+.+++.+.||||+++++++.. ...
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------~-------~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~ 91 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ------Q-------RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDEL 91 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccch------h-------HHHHHHHHHHHHHHcCCCChheEEEEEEcCCeE
Confidence 78999999999999975 478999998853221 0 13447899999999999999999997766 788
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++|+||+++++|.+++.. ..+++..+..++.|++.||.|||+ ++++||||+|+||+++.++.++|+|||++...
T Consensus 92 ~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 92 WVVMEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA--QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred EEEEeccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 999999999999999876 358999999999999999999999 88999999999999999999999999987754
Q ss_pred cCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......|+..|+|||.+.+ .++.++|+|||||++|||++|..||...+............. . ..
T Consensus 166 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~--~-----~~ 235 (285)
T cd06648 166 SKEV---PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP--P-----KL 235 (285)
T ss_pred ccCC---cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC--C-----CC
Confidence 3321 11233568999999997654 578899999999999999999999987654322221111100 0 00
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ....++..+.+++.+||..+|++||++.++++
T Consensus 236 ~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 236 K--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred c--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0 01124456889999999999999999999985
No 319
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.1e-36 Score=289.93 Aligned_cols=247 Identities=28% Similarity=0.378 Sum_probs=193.6
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+..+.||.|+||.||++.++ +++.||+|.+...... .....+.+|++++++++||||+++++++..
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE------------AIQKQILRELDILHKCNSPYIVGFYGAFYNN 71 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh------------HHHHHHHHHHHHHHHCCCCchhhhheeeecC
Confidence 34488999999999999987 4889999998654221 114558899999999999999999998766
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++++||+.+++|.+++.... .++++..+..++.|++.||.|||+. .+++|+||||+||+++.++.++|+|||.+
T Consensus 72 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~-~~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 72 GDISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEK-HKIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred CEEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCC-CCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 78899999999999999998643 4789999999999999999999982 47999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCch---hhHHHHHHhcccchhh
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNT---ILYYYLVVEQEVPVRE 406 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~---~~~~~~~~~~~~~~~~ 406 (455)
....... .....|+..|+|||.+.+ .++.++|+||||+++|+|++|..||...+. ....... .
T Consensus 149 ~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--------~ 215 (265)
T cd06605 149 GQLVNSL-----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ--------Y 215 (265)
T ss_pred hhhHHHH-----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH--------H
Confidence 7553221 112678899999997644 578899999999999999999999976531 1111110 0
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.........+...++..+.++|.+|+..+|++||++.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 216 IVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 00111111111225566889999999999999999999875
No 320
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.2e-36 Score=292.71 Aligned_cols=245 Identities=27% Similarity=0.431 Sum_probs=193.2
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|... +++.||+|.+..... . ....+.+|+.++++++||||+++++++..
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~hp~i~~~~~~~~~ 87 (293)
T cd06647 21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ------P-------KKELIINEILVMRENKHPNIVNYLDSYLV 87 (293)
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc------h-------HHHHHHHHHHHHhhcCCCCeeehhheeee
Confidence 345589999999999999875 478999999853211 1 13458899999999999999999998876
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.+ ..+++..+..++.+++.||.|||+ +|++|+||||+||+++.++.+||+|||+
T Consensus 88 ~~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~--~gi~H~dL~p~Nili~~~~~~kL~dfg~ 161 (293)
T cd06647 88 GDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGF 161 (293)
T ss_pred CCcEEEEEecCCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh--CCEeeccCCHHHEEEcCCCCEEEccCcc
Confidence 788999999999999999875 247899999999999999999999 8999999999999999999999999998
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|++.|+|||.+ .+.++.++|+|||||++|++++|..||...+............
T Consensus 162 ~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~------- 231 (293)
T cd06647 162 CAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG------- 231 (293)
T ss_pred eeccccccc---ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC-------
Confidence 875443221 12335688999999966 4467889999999999999999999998654321111110000
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.........++..+.+++.+||..+|.+||++.+++.
T Consensus 232 --~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 232 --TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred --CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0001112234566889999999999999999999976
No 321
>KOG0986|consensus
Probab=100.00 E-value=1.2e-37 Score=301.66 Aligned_cols=255 Identities=23% Similarity=0.308 Sum_probs=199.2
Q ss_pred eeeHHHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHH
Q psy520 153 AFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ 231 (455)
Q Consensus 153 ~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 231 (455)
.|..-|+...|.+. ++.-++||+||||.||-+..+ +|+.||.|++.++...... .....++|-+
T Consensus 173 QWK~lE~qpvt~n~-----F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~----------ge~maLnEk~ 237 (591)
T KOG0986|consen 173 QWKWLELQPVTKNT-----FRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRK----------GETMALNEKQ 237 (591)
T ss_pred HHHHHHhhhccccc-----eeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhh----------hhHHhhHHHH
Confidence 34444454444432 233489999999999999876 4999999999765542211 1344779999
Q ss_pred HHHcCCCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCC
Q psy520 232 TLSQCKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 310 (455)
Q Consensus 232 ~l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dik 310 (455)
+|.++..+.||.+--.+.. +..|||+..|.||+|.-+|...+. +.+++..++.++.+|+.||++||+ ..||+||+|
T Consensus 238 iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~--~~iVYRDLK 314 (591)
T KOG0986|consen 238 ILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHR--RRIVYRDLK 314 (591)
T ss_pred HHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHh--cceeeccCC
Confidence 9999999999998554444 899999999999999999987664 789999999999999999999999 889999999
Q ss_pred CCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCc
Q psy520 311 SANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNN 389 (455)
Q Consensus 311 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~ 389 (455)
|+|||||+.|+++|+|+|||........ ....+||.+|||||++. +.++...|+||+||+||||+.|+.||....
T Consensus 315 PeNILLDd~GhvRISDLGLAvei~~g~~----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K 390 (591)
T KOG0986|consen 315 PENILLDDHGHVRISDLGLAVEIPEGKP----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK 390 (591)
T ss_pred hhheeeccCCCeEeeccceEEecCCCCc----cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh
Confidence 9999999999999999999998776543 22348999999999774 468899999999999999999999998654
Q ss_pred hhhHH----HHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC
Q psy520 390 TILYY----YLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS 441 (455)
Q Consensus 390 ~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs 441 (455)
..... ......+. .+ ++..+...+++....|..||.+|..
T Consensus 391 eKvk~eEvdrr~~~~~~-----------ey-~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 391 EKVKREEVDRRTLEDPE-----------EY-SDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred hhhhHHHHHHHHhcchh-----------hc-ccccCHHHHHHHHHHHccCHHHhcc
Confidence 32211 11111111 11 1345566888888999999999854
No 322
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.2e-36 Score=296.25 Aligned_cols=259 Identities=25% Similarity=0.334 Sum_probs=197.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||+|+... ++.||||++....... .....+.+|+.+++.++|+||+++++++..
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL-----------IDAKRILREIKLLRHLRHENIIGLLDILRP 70 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccc-----------hhhhhHHHHHHHHHhcCCcchhhhhhhhcc
Confidence 5667999999999999999864 8999999987532200 113458899999999999999999998766
Q ss_pred -c-----ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEE
Q psy520 251 -I-----MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 251 -~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
. ..++||+|+. ++|.+++.+ ..++++..+..++.+++.||.|||+ +|++||||||+||+++.++.++|
T Consensus 71 ~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~--~gi~H~dlkp~nili~~~~~~~L 144 (330)
T cd07834 71 PSPEDFNDVYIVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHS--ANVIHRDLKPSNILVNSNCDLKI 144 (330)
T ss_pred cCcccccceEEEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEE
Confidence 3 6799999996 589888876 3479999999999999999999999 89999999999999999999999
Q ss_pred ccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cc
Q psy520 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QE 401 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~ 401 (455)
+|||++.................++..|+|||.+.+ ..+.++|+||||+++|+|++|.+||...........+.. ..
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 224 (330)
T cd07834 145 CDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLG 224 (330)
T ss_pred cccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcC
Confidence 999998876543211112234568899999997754 468899999999999999999999987764332222221 11
Q ss_pred cchhh------------hcchhhcC----C--ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 402 VPVRE------------VLDKEAGE----W--NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~------------~~d~~~~~----~--~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+... .+...... + .....+..+.++|.+||..+|.+||++++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred CCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 11100 00000000 0 01124556888999999999999999999987
No 323
>KOG0983|consensus
Probab=100.00 E-value=6.3e-37 Score=279.90 Aligned_cols=244 Identities=26% Similarity=0.375 Sum_probs=190.0
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-CcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-~~ 252 (455)
..||.|+.|+|++++.+. |...|||.+....... ..++.+..+.++.... .|+||+.+||+.. ..
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nke------------e~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKE------------ENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD 165 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHH------------HHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch
Confidence 679999999999999874 7899999997654311 1344667777776664 8999999998866 67
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++.||.| ..-+..++.+.. .++++..+-++...++.||.||-+ .++|+|||+||+|||+|+.|.+|+||||++-.
T Consensus 166 V~IcMelM-s~C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKe-KH~viHRDvKPSNILlDe~GniKlCDFGIsGr 241 (391)
T KOG0983|consen 166 VFICMELM-STCAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKE-KHGVIHRDVKPSNILLDERGNIKLCDFGISGR 241 (391)
T ss_pred HHHHHHHH-HHHHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHH-hcceeecccCccceEEccCCCEEeecccccce
Confidence 77889988 344455555443 479999999999999999999987 47899999999999999999999999999876
Q ss_pred ccCCCcccceeccCCCCCCcCCcccccC----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
...+. ..+...|-+.|||||.+.. .++.++|||||||+++||.||+.||...+.......+...+.+ ..+
T Consensus 242 lvdSk----AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP--P~L 315 (391)
T KOG0983|consen 242 LVDSK----AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP--PLL 315 (391)
T ss_pred eeccc----ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC--CCC
Confidence 65443 2345689999999997743 4778999999999999999999999987754433333322222 222
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+... .++..+.+|+..||.+|+.+||...++++
T Consensus 316 ~~~~------gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 316 PGHM------GFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred Cccc------CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 2222 25566899999999999999999988765
No 324
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.4e-36 Score=301.02 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=190.3
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||+|... +++.||||++....... . ....+.+|+.++++++||||+++++++.
T Consensus 17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 85 (353)
T cd07850 17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV----T-------HAKRAYRELVLMKLVNHKNIIGLLNVFT 85 (353)
T ss_pred ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccCh----h-------HHHHHHHHHHHHHhcCCCCCcceeeeec
Confidence 3455699999999999999986 48999999985322100 0 1334778999999999999999998764
Q ss_pred C-------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 250 N-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. ...|+||||+. ++|.+.+.. .++...+..++.|++.||.|||+ .|++||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nil~~~~~~~ 157 (353)
T cd07850 86 PQKSLEEFQDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTL 157 (353)
T ss_pred cCCCccccCcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCE
Confidence 3 34689999994 688888765 28899999999999999999999 899999999999999999999
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-c
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
||+|||+++...... ......|+..|+|||.+. ..++.++|||||||++|+|++|..||...+.......+.. -
T Consensus 158 kL~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 233 (353)
T cd07850 158 KILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQL 233 (353)
T ss_pred EEccCccceeCCCCC----CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhc
Confidence 999999998654322 122346889999999664 4678999999999999999999999986653222211111 0
Q ss_pred ccchh--------------------------hhcchhh----cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVR--------------------------EVLDKEA----GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~--------------------------~~~d~~~----~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+.. +...... ........+..+.++|.+|+..||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 234 GTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred CCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00100 0000000 00001234556789999999999999999999985
No 325
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8.7e-36 Score=293.97 Aligned_cols=241 Identities=27% Similarity=0.395 Sum_probs=189.5
Q ss_pred CCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cc
Q psy520 175 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.++||+|+||+||+|+.. +++.||+|++........ .....+.+|+.++++++|||++++++++.+ ..
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~----------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 95 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN----------EKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHT 95 (313)
T ss_pred ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCch----------HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE
Confidence 378999999999999976 488999999864322110 013457889999999999999999998877 77
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+. |+|.+.+.... .++++.++..++.|++.||.|||+ .|++||||||+||+++.++.+||+|||++..
T Consensus 96 ~~lv~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dl~p~nili~~~~~~kL~dfg~~~~ 170 (313)
T cd06633 96 AWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGSASK 170 (313)
T ss_pred EEEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCChhhEEECCCCCEEEeecCCCcc
Confidence 899999994 68888876533 468999999999999999999999 8899999999999999999999999998764
Q ss_pred ccCCCcccceeccCCCCCCcCCccccc----CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
... .....|+..|+|||.+. +.++.++|+|||||++|+|++|..||...+.............
T Consensus 171 ~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~------ 237 (313)
T cd06633 171 SSP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS------ 237 (313)
T ss_pred cCC-------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC------
Confidence 321 22457889999999763 4578899999999999999999999987653322222211111
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.......++..+.+|+.+||..+|.+||++.+++.
T Consensus 238 ----~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 238 ----PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred ----CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111223445888999999999999999999875
No 326
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.4e-35 Score=288.16 Aligned_cols=247 Identities=27% Similarity=0.414 Sum_probs=197.0
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|+..+.||+|+||.||+|.++ ++..||+|++..... ....+.+|++++++++|+|++++++++.
T Consensus 20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 85 (286)
T cd06614 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--------------NKELIINEILIMKDCKHPNIVDYYDSYL 85 (286)
T ss_pred cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--------------hHHHHHHHHHHHHHCCCCCeeEEEEEEE
Confidence 3455589999999999999987 488999999864321 1345889999999999999999999776
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...++|+||+++++|.+++.... ..+++..+..++.+++.||.|||+ .|++|+||+|+||+++.++.++|+|||
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~--~gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 86 VGDELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS--QNVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred ECCEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCChhhEEEcCCCCEEECccc
Confidence 6 88899999999999999998743 379999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......++..|+|||.+.+ .++.++|+|||||++|+|++|..||...........+..... ..
T Consensus 162 ~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~- 235 (286)
T cd06614 162 FAAQLTKEKS---KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI--PP- 235 (286)
T ss_pred hhhhhccchh---hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CC-
Confidence 8765433211 1233467889999996644 578899999999999999999999987654322222211110 00
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......++..+.++|.+|+..+|.+||++.++++
T Consensus 236 ------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 ------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0111224566889999999999999999999975
No 327
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=6.7e-36 Score=293.21 Aligned_cols=260 Identities=23% Similarity=0.314 Sum_probs=189.3
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|.++ +++.||||++......... ...+.+|++++++++||||+++++++.+
T Consensus 10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (311)
T cd07866 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGF-----------PITALREIKILKKLKHPNVVPLIDMAVE 78 (311)
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCc-----------chhHHHHHHHHHhcCCCCccchhhheec
Confidence 456689999999999999986 4889999998654321111 1236789999999999999999986543
Q ss_pred ---------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 251 ---------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 251 ---------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
...++|++|+. ++|...+... ...+++.++..++.|++.||.|||+ .|++|+||||+||++++++.
T Consensus 79 ~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~--~~i~H~dl~p~nil~~~~~~ 153 (311)
T cd07866 79 RPDKSKRKRGSVYMVTPYMD-HDLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHE--NHILHRDIKAANILIDNQGI 153 (311)
T ss_pred ccccccccCceEEEEEecCC-cCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCC
Confidence 24689999995 5777777653 3469999999999999999999999 88999999999999999999
Q ss_pred eEEccccccccccCCCccc--------ceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchh
Q psy520 322 PKLGDFGIVKMSETSNMKT--------MYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTI 391 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~--------~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~ 391 (455)
+||+|||+++......... .......|++.|+|||.+.+ .++.++|||||||++|||++|.+||......
T Consensus 154 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~ 233 (311)
T cd07866 154 LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233 (311)
T ss_pred EEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999987654332111 11123467888999997643 4688999999999999999999999866533
Q ss_pred hHHHHHHh--cccch---------hhhcchhh-cCCC------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 392 LYYYLVVE--QEVPV---------REVLDKEA-GEWN------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 392 ~~~~~~~~--~~~~~---------~~~~d~~~-~~~~------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
........ ..... +...+... ...+ .......+.++|.+||..+|.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 234 DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 22111111 00000 00000000 0000 0122355788999999999999999999874
No 328
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.9e-36 Score=289.33 Aligned_cols=249 Identities=27% Similarity=0.408 Sum_probs=196.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
|.+.+.||+|+||.||+|... ++..||+|++........ .....+.+|+.+++++. ||||+++++++.
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~----------~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~ 72 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKE----------KKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ 72 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccch----------HHHHHHHHHHHHHHhcccCCCchhHHHHhc
Confidence 456689999999999999986 489999999865322111 01345788999999998 999999999876
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ ...++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~--~~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 73 DEENLYFVLEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHS--KGIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred CCceEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEecCCc
Confidence 6 7889999999999999999873 369999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcc-----------------cceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCch
Q psy520 329 IVKMSETSNMK-----------------TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNT 390 (455)
Q Consensus 329 la~~~~~~~~~-----------------~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~ 390 (455)
++......... ........|+..|+|||.+. +..+.++|+||||++++++++|..||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 98765443211 01223456889999999654 4578899999999999999999999987763
Q ss_pred hhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCH----HHHHH
Q psy520 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM----RDIVD 447 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~----~evl~ 447 (455)
.............+ +..++..+.++|.+|+..+|.+||++ .++++
T Consensus 228 ~~~~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 YLTFQKILKLEYSF------------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHHHhcCCCC------------CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 32222111111111 12235558899999999999999999 66653
No 329
>KOG0596|consensus
Probab=100.00 E-value=6.8e-37 Score=302.76 Aligned_cols=249 Identities=24% Similarity=0.260 Sum_probs=193.2
Q ss_pred CCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
.|++.++||.||.+.||++...+.+.||+|++..... + .-....|.+|+..|.+++ |.+||.+++|-.
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~------D-----~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv 430 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEA------D-----NQTLDGYRNEIALLNKLKGHDKIIQLYDYEV 430 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhc------C-----HHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence 3578899999999999999987778899998754322 1 112667999999999995 999999999976
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. +..|+||||= ..+|..+|..... ....| .+..+..|++.++.++|. +||||.||||+|+|+-+ |.+||+|||
T Consensus 431 ~d~~lYmvmE~G-d~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~--~gIVHSDLKPANFLlVk-G~LKLIDFG 504 (677)
T KOG0596|consen 431 TDGYLYMVMECG-DIDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQ--HGIVHSDLKPANFLLVK-GRLKLIDFG 504 (677)
T ss_pred cCceEEEEeecc-cccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHH--hceeecCCCcccEEEEe-eeEEeeeec
Confidence 6 8889999975 7899999987554 22334 788999999999999999 89999999999999975 699999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC------------CCCChhhHHHHHHHHHHHHcCCCCCCCCc-hhhHHH
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------------QISTKTDVFSYGVILLELLTGMKPIDDNN-TILYYY 395 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------------~~s~~sDi~SlGvvl~elltG~~p~~~~~-~~~~~~ 395 (455)
+|....... ........+||+.||+||++.. +.+.+|||||+|||||+|+.|++||..-. ......
T Consensus 505 IA~aI~~DT-TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~ 583 (677)
T KOG0596|consen 505 IANAIQPDT-TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLH 583 (677)
T ss_pred hhcccCccc-cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHH
Confidence 999876654 3455567899999999997731 14678999999999999999999998644 222222
Q ss_pred HHHhcccchhhhcchhh-cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 396 LVVEQEVPVREVLDKEA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. +.++.. -+++...-...+.+++.+||..||++||++.++++
T Consensus 584 a----------I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 584 A----------ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred h----------hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2 222211 01111111111777899999999999999999986
No 330
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.7e-36 Score=289.42 Aligned_cols=257 Identities=25% Similarity=0.344 Sum_probs=192.6
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.++||.|+||.||+|...+ ++.||+|++........ ....+.+|++++++++|+|++++++++.+
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~-----------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 70 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEG-----------FPITAIREIKLLQKLRHPNIVRLKEIVTSK 70 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccccccc-----------chHHHHHHHHHHHhccCCCeeeheeeEecC
Confidence 456889999999999999874 78999999986531100 12347889999999999999999997755
Q ss_pred --cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++||||++ ++|.+++.... ..+++.+++.++.|++.||.|||+ .+++|+||||+||++++++.+||+|||
T Consensus 71 ~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~--~~~~h~dl~p~nil~~~~~~~~l~d~g 145 (287)
T cd07840 71 GKGSIYMVFEYMD-HDLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHS--NGILHRDIKGSNILINNDGVLKLADFG 145 (287)
T ss_pred CCCcEEEEecccc-ccHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCcHHHeEEcCCCCEEEcccc
Confidence 47899999996 58988887532 468999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cccc-
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVP- 403 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~- 403 (455)
++........ .......++..|+|||.+.+ .++.++||||||+++|||+||..||.............. ....
T Consensus 146 ~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (287)
T cd07840 146 LARPYTKRNS--ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTD 223 (287)
T ss_pred ceeeccCCCc--ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCch
Confidence 9886654321 11223456888999996643 468899999999999999999999987663222111111 0000
Q ss_pred --hhhhcc--------------hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 --VREVLD--------------KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 --~~~~~d--------------~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+...+ ...........+..+.+++.+|+..+|.+||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 224 ENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000 00000000112556788999999999999999999875
No 331
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.2e-36 Score=291.78 Aligned_cols=258 Identities=21% Similarity=0.301 Sum_probs=190.8
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||+|.++ +|+.||+|.+........ ....+.+|++++++++||||+++++++.+
T Consensus 4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 72 (294)
T PLN00009 4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEG-----------VPSTAIREISLLKEMQHGNIVRLQDVVHS 72 (294)
T ss_pred eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccccc-----------chHHHHHHHHHHHhccCCCEeeEEEEEec
Confidence 455689999999999999986 488999999864322110 12347889999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC-CCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl~DFG 328 (455)
...++||||++ ++|.+++.... ...+++..+..++.|++.||+|||+ ++++|+||||+||+++. ++.+||+|||
T Consensus 73 ~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~--~~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 73 EKRLYLVFEYLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHS--HRVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred CCeEEEEEeccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCcceEEEECCCCEEEEcccc
Confidence 78899999995 68888876533 2346888899999999999999999 89999999999999985 5679999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccchh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR 405 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~ 405 (455)
++....... .......+++.|+|||.+.+ .++.++|||||||++|+|+||.+||.............. ...+..
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (294)
T PLN00009 149 LARAFGIPV---RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNE 225 (294)
T ss_pred cccccCCCc---cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 987543321 11123467889999997644 368899999999999999999999987653322221111 011111
Q ss_pred hhcc---------hhhcCCC-------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLD---------KEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d---------~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+. .....+. ....+..+.+++.+|+..+|++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 226 ETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1100 0000000 1123455788999999999999999999875
No 332
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.3e-36 Score=285.63 Aligned_cols=250 Identities=28% Similarity=0.380 Sum_probs=196.6
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|++|.||+|..+. ++.||||++...... .....+.+|+.++.+++|+|++++++++..
T Consensus 4 ~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (264)
T cd06623 4 ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE------------EFRKQLLRELKTLRSCESPYVVKCYGAFYKE 71 (264)
T ss_pred eeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch------------HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC
Confidence 455899999999999999875 899999998654321 114558899999999999999999998777
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++... .++++..+..++.|++.|+.|||+. .+++||||+|+||+++.++.++|+|||++
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~-~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 72 GEISIVLEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTK-RHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred CeEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhcc-CCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 7889999999999999999863 5699999999999999999999972 46999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
......... .....++..|+|||.+.+ ..+.++|+||||+++|+|+||..||............. ....
T Consensus 148 ~~~~~~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~-------~~~~ 217 (264)
T cd06623 148 KVLENTLDQ---CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQ-------AICD 217 (264)
T ss_pred eecccCCCc---ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHH-------HHhc
Confidence 865433211 124568889999996644 56889999999999999999999997764211001100 0000
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
......+...++..+.++|.+||..+|++||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 218 GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111111122255678899999999999999999999873
No 333
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.3e-35 Score=287.42 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=192.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
|.+.+.||+|+||+||+|...+ ++.||||++....... . .....+|+..+++++ |||++++++++.
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----~--------~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 68 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW----E--------ECMNLREVKSLRKLNEHPNIVKLKEVFR 68 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch----h--------HHHHHHHHHHHHhccCCCCchhHHHHhh
Confidence 3456889999999999999864 7889999986432210 0 122457999999999 999999999877
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ ...++||||+ +|+|.+++.... ...+++.++..++.|++.||.|||+ ++++|+||+|+||+++.++.++|+|||
T Consensus 69 ~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~dl~~~ni~i~~~~~~~l~d~~ 144 (283)
T cd07830 69 ENDELYFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHK--HGFFHRDLKPENLLVSGPEVVKIADFG 144 (283)
T ss_pred cCCcEEEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEEcCCCCEEEeecc
Confidence 7 7889999999 899999987744 2468999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc--CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cccch
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVPV 404 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~~ 404 (455)
++........ .....|+..|+|||.+. ..++.++|+||||++++||++|.+||.............. .....
T Consensus 145 ~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (283)
T cd07830 145 LAREIRSRPP----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTK 220 (283)
T ss_pred cceeccCCCC----cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCCh
Confidence 9876543221 12346888999999763 3468899999999999999999999976653322222111 00000
Q ss_pred ---------hhhcchh--------hcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 ---------REVLDKE--------AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ---------~~~~d~~--------~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+.. .....+ ..+..+.++|.+||..+|++||++.|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 221 QDWPEGYKLASKLGFRFPQFAPTSLHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hhhhhHhhhhccccccccccccccHHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000 000000 11356888999999999999999999875
No 334
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.3e-35 Score=292.14 Aligned_cols=259 Identities=21% Similarity=0.215 Sum_probs=189.8
Q ss_pred CCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cc
Q psy520 174 RGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+++.+|.|+++.||++.. +++.||||+++...... .....+.+|++++++++|+||+++++++.+ ..
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~-----------~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 73 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSK-----------EDLKLLQQEIITSRQLQHPNILPYVTSFIVDSE 73 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccch-----------hHHHHHHHHHHHHHhcCCcchhhhhheeecCCe
Confidence 445566666666666655 48999999997542110 014568999999999999999999997776 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||.+..
T Consensus 74 ~~~~~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~--~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~ 150 (314)
T cd08216 74 LYVVSPLMAYGSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHS--KGFIHRSVKASHILLSGDGKVVLSGLRYSVS 150 (314)
T ss_pred EEEEEeccCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCcceEEEecCCceEEecCcccee
Confidence 899999999999999998643 2358899999999999999999999 8899999999999999999999999998875
Q ss_pred ccCCCcc----cceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccc--
Q psy520 333 SETSNMK----TMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP-- 403 (455)
Q Consensus 333 ~~~~~~~----~~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~-- 403 (455)
....... ........++..|+|||++.+ .++.++|+|||||++|||++|..||..................
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (314)
T cd08216 151 MIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCL 230 (314)
T ss_pred eccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccc
Confidence 4322111 111234567888999998754 3688999999999999999999999865432211111100000
Q ss_pred -----hhh-----------hcchhh----cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 404 -----VRE-----------VLDKEA----GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -----~~~-----------~~d~~~----~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+. ..+... .......++..+.+|+.+||..||.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 000000 00112234556888999999999999999999976
No 335
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.5e-36 Score=289.90 Aligned_cols=252 Identities=23% Similarity=0.278 Sum_probs=190.7
Q ss_pred CcCCCcccccCCEEEEEEEEc----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
|++.+.||+|+||.||++... +|+.||+|+++....... ......+.+|+.++.++ +|+||+++++
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~~~~~i~~~~~ 72 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQK---------AKTTEHTRTERQVLEHIRQSPFLVTLHY 72 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhc---------chHHHHHHHHHHHHHhcccCCChhceee
Confidence 455689999999999999863 578999999864322111 11134578899999999 5999999998
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEc
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
++.. ...++||||+++++|.+++.. ..++++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+
T Consensus 73 ~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~ 147 (290)
T cd05613 73 AFQTDTKLHLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHK--LGIIYRDIKLENILLDSNGHVVLT 147 (290)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEECCCCCEEEe
Confidence 7766 677899999999999999987 3468899999999999999999999 889999999999999999999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
|||++......... ......|+..|+|||.+.+ ..+.++||||||+++|+|++|..||..............
T Consensus 148 dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~--- 222 (290)
T cd05613 148 DFGLSKEFHEDEVE--RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR--- 222 (290)
T ss_pred eCccceeccccccc--ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH---
Confidence 99998765432211 1224568999999997643 357899999999999999999999975432110000000
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC-----CHHHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
.+...... .+..++..+.+++.+|+..+|.+|| ++.++++
T Consensus 223 ----~~~~~~~~-~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 223 ----RILKSEPP-YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----HhhccCCC-CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 00000001 1123455688999999999999997 6677654
No 336
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.2e-35 Score=287.19 Aligned_cols=256 Identities=23% Similarity=0.302 Sum_probs=195.1
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|++|.||+|... +++.+|+|+++...... .....+.+|++++++++|+||+++++++.+
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 70 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE-----------GIPKTALREIKLLKELNHPNIIKLLDVFRHK 70 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc-----------hhHHHHHHHHHHHHHhcCCCcchHHHhhccC
Confidence 45588999999999999986 48899999986543211 013457889999999999999999998777
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|+||++ ++|.+.+.... .++++.++..++.+++.||.|||+ .+++|+||||+||+++.++.+||+|||.+
T Consensus 71 ~~~~~v~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~df~~~ 145 (283)
T cd05118 71 GDLYLVFEFMD-TDLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHS--HGILHRDLKPENLLINTEGVLKLADFGLA 145 (283)
T ss_pred CCEEEEEeccC-CCHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHH--CCeeecCcCHHHEEECCCCcEEEeeeeee
Confidence 78899999996 58888887643 478999999999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccchhh-
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE- 406 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~- 406 (455)
....... .......++..|+|||.+.+ ..+.++|+||||+++|+|+||+.||...+.......... ...+...
T Consensus 146 ~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (283)
T cd05118 146 RSFGSPV---RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEV 222 (283)
T ss_pred EecCCCc---ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHh
Confidence 7665432 11123467889999996644 468899999999999999999999977664322222111 0110000
Q ss_pred ---hcc---h---hh---cCC----ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 ---VLD---K---EA---GEW----NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ---~~d---~---~~---~~~----~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ . .. ... ....++..+.++|.+|+..||.+||++.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 223 WPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred cccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000 0 00 000 01235677889999999999999999999875
No 337
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.7e-35 Score=279.95 Aligned_cols=246 Identities=28% Similarity=0.429 Sum_probs=196.4
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|...+.||+|+||.||++.+. ++..|++|++..... . ....+.+|+.++++++|+|++++++++..
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 68 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK------E-------KKEKIINEIQILKKCKHPNIVKYYGSYLK 68 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch------h-------HHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence 445689999999999999986 488999999965332 0 14458899999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++++||+++++|.+++.... ..+++..+..++.+++.||.|||+ .+++||||+|+||+++.++.++|+|||.
T Consensus 69 ~~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~~~ 144 (253)
T cd05122 69 KDELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS--NGIIHRDIKAANILLTSDGEVKLIDFGL 144 (253)
T ss_pred CCeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc--CCEecCCCCHHHEEEccCCeEEEeeccc
Confidence 78899999999999999987742 468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ .....|+..|+|||.+. +..+.++|+||||+++|+|++|..||...+.......... .......
T Consensus 145 ~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~ 218 (253)
T cd05122 145 SAQLSDTKA----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT--NGPPGLR 218 (253)
T ss_pred ccccccccc----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--cCCCCcC
Confidence 876654321 23457889999999664 4568899999999999999999999987642221111111 1111110
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....++..+.++|.+|+..||++||++.++++
T Consensus 219 -------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 219 -------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred -------cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11113456889999999999999999999875
No 338
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=7.9e-36 Score=297.32 Aligned_cols=258 Identities=23% Similarity=0.312 Sum_probs=192.3
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|.+.+.||+|+||+||+|... +++.||||.++...... . ....+.+|+.+++.++|+||+++++++.
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~----~-------~~~~~~~E~~~l~~l~h~ni~~~~~~~~ 74 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR----I-------DAKRTLREIKLLRHLDHENVIAIKDIMP 74 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc----c-------hhHHHHHHHHHHHhcCCCCccchHHhee
Confidence 3556689999999999999976 48999999986432111 0 1234678999999999999999999765
Q ss_pred C------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 250 N------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 250 ~------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
. ...++||||+. ++|.+++.. ...+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+|
T Consensus 75 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~--~~i~H~dlkp~Nil~~~~~~~k 148 (337)
T cd07858 75 PPHREAFNDVYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHS--ANVLHRDLKPSNLLLNANCDLK 148 (337)
T ss_pred cccccccCcEEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEE
Confidence 4 24689999994 789888875 3469999999999999999999999 8899999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCccccc--CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-- 399 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-- 399 (455)
|+|||+++...... .......++..|+|||.+. ...+.++|+|||||++|+|++|.+||...+.......+..
T Consensus 149 L~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 225 (337)
T cd07858 149 ICDFGLARTTSEKG---DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELL 225 (337)
T ss_pred ECcCccccccCCCc---ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence 99999988654321 1122346788999999664 3578899999999999999999999976542211111110
Q ss_pred cccc-----------hhhhcchhhc--C----CChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 400 QEVP-----------VREVLDKEAG--E----WNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 400 ~~~~-----------~~~~~d~~~~--~----~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+... ....+..... . .....++..+.++|.+||..+|++||+++++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 226 GSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000 0000000000 0 0012345668899999999999999999999864
No 339
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.9e-36 Score=290.60 Aligned_cols=256 Identities=22% Similarity=0.236 Sum_probs=193.5
Q ss_pred CcCCCcccccCCEEEEEEEEc----CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
|++.+.||+|+||.||+++.. +++.||||+++....... ......+.+|++++.++ +||||+++++
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~---------~~~~~~~~~E~~~l~~~~~~~~i~~~~~ 72 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQK---------AKTAEHTRTERQVLEAVRRCPFLVTLHY 72 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhh---------hhHHHHHHHHHHHHHhccCCcchhhhhe
Confidence 345688999999999999853 468899999874322110 11134588999999999 5999999998
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEc
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
.+.. ...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+++||||||.||+++.++.++|+
T Consensus 73 ~~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~--~~~~H~dl~p~nil~~~~~~~~l~ 147 (288)
T cd05583 73 AFQTDTKLHLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQ--LGIIYRDIKLENILLDSEGHVVLT 147 (288)
T ss_pred eeecCCEEEEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEE
Confidence 7665 7788999999999999998763 468999999999999999999999 899999999999999999999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccCC---CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ---ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
|||+++...... ........|+..|+|||.+.+. .+.++|+||||+++|||++|..||..............
T Consensus 148 dfg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--- 222 (288)
T cd05583 148 DFGLSKEFLAEE--EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR--- 222 (288)
T ss_pred ECcccccccccc--ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH---
Confidence 999987654332 1122345689999999976543 57899999999999999999999964332111000000
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
...... ...+..++..+.+++.+|+..+|++||++.++.+.|+.
T Consensus 223 ---~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 223 ---RILKSK--PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ---HHHccC--CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 000000 01112244557889999999999999999888776643
No 340
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.3e-35 Score=334.46 Aligned_cols=248 Identities=23% Similarity=0.403 Sum_probs=189.8
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||+|.+. ++..||||+++.... . ...|++++++++|||||+++++|.+ ...
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~-----------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~ 758 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------I-----------PSSEIADMGKLQHPNIVKLIGLCRSEKGA 758 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------c-----------cHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence 88999999999999975 589999999853211 0 2346888999999999999999877 778
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-SKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~-~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
++|||||++|+|.++++. ++|.++..|+.|++.|++|||.. ..+++||||||+||+++.++.+++. ||....
T Consensus 759 ~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~ 831 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGL 831 (968)
T ss_pred EEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccc
Confidence 999999999999999963 89999999999999999999942 2789999999999999999988875 665443
Q ss_pred ccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCch---hhHHHHH-Hhcccchhhh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNT---ILYYYLV-VEQEVPVREV 407 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~---~~~~~~~-~~~~~~~~~~ 407 (455)
... .....||+.|+|||++. +.++.++|||||||++|||+||+.||+.... ....+.. ..........
T Consensus 832 ~~~-------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (968)
T PLN00113 832 LCT-------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMW 904 (968)
T ss_pred ccc-------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhe
Confidence 211 11236889999999765 4688999999999999999999999964321 1111111 1122223334
Q ss_pred cchhhcCC--ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 408 LDKEAGEW--NETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 408 ~d~~~~~~--~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+|+..... ........+.+++.+|+..+|++||+|.||++.|+++..
T Consensus 905 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 905 IDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred eCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 44433211 112233346678899999999999999999999998754
No 341
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.1e-35 Score=296.23 Aligned_cols=257 Identities=25% Similarity=0.333 Sum_probs=191.1
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 249 (455)
|.+.+.||+|+||.||+|.+. +++.||||++........ ....+.+|+.+++++ +||||+++++++.
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~h~ni~~~~~~~~ 77 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-----------DAQRTFREIMFLQELGDHPNIVKLLNVIK 77 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-----------hhhhhhHHHHHHHHhcCCCCccceeeeec
Confidence 345589999999999999986 478999999854221100 023467899999999 9999999999765
Q ss_pred C---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 250 N---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 250 ~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
. ...++||||+. ++|.+++... .+++..+..++.|++.||.|||+ .|++||||||+||+++.++.+||+|
T Consensus 78 ~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~--~~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 78 AENDKDIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHS--GNVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred cCCCceEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEEee
Confidence 3 35789999996 6998888752 68899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCcc--cceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cc
Q psy520 327 FGIVKMSETSNMK--TMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QE 401 (455)
Q Consensus 327 FGla~~~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~ 401 (455)
||++......... ........||..|+|||.+.+ ..+.++|+||||+++|+|+||+.||.............. ..
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 230 (337)
T cd07852 151 FGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIG 230 (337)
T ss_pred ccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9998865443211 112234578999999997643 468899999999999999999999976543222111111 00
Q ss_pred cch------------hhhcchhh-------cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 402 VPV------------REVLDKEA-------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~------------~~~~d~~~-------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... ...++... ... ...++..+.++|.+||..+|.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLDEL-LPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchhhh-ccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 000 00111000 000 0114556888999999999999999999986
No 342
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.1e-35 Score=290.57 Aligned_cols=266 Identities=15% Similarity=0.134 Sum_probs=181.5
Q ss_pred CCcCCCcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhH-hhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTE-AAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
.|++.++||+|+||.||+|.+.+ +..+|+|+...... ....+.. ...........+...+..+.|+|+++++
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~---~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE---TIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC---chhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 46677999999999999999764 34566665432211 0000000 0000111233445566778999999999
Q ss_pred ccccCc-----ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 246 GFCNNI-----MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 246 ~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+++... ..+++++++ ..++.+.+... ...++..+..|+.|++.||.|||+ ++++||||||+|||++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~--~~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKL-VENTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHE--HGISHGDIKPENIMVDGNN 163 (294)
T ss_pred EeeeEecCCceEEEEEEehh-ccCHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCC
Confidence 865432 335677776 45677766552 246788899999999999999999 8999999999999999999
Q ss_pred ceEEccccccccccCCCcc----cceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCch-hhHH
Q psy520 321 VPKLGDFGIVKMSETSNMK----TMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNT-ILYY 394 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~----~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~-~~~~ 394 (455)
.+||+|||+++........ ........||+.|+|||+..+ .++.++|||||||++|||++|..||..... ....
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 9999999999865432211 011223579999999997654 578999999999999999999999986632 1111
Q ss_pred HHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q psy520 395 YLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 395 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...... -+....... .....++..+.+++..|+..+|++||+++++.+.|+
T Consensus 244 ~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 244 HAAKCD--FIKRLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHhHHH--HHHHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 110000 000111111 111234566889999999999999999999998763
No 343
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.7e-35 Score=294.51 Aligned_cols=269 Identities=20% Similarity=0.238 Sum_probs=193.2
Q ss_pred cCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHh-hhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEA-AMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.+.+.||.|+||+||+|.++ +++.||||+++............... .......+.+|++++++++|+||+++++++..
T Consensus 12 ~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 91 (335)
T PTZ00024 12 QKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE 91 (335)
T ss_pred hhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec
Confidence 34578999999999999976 48999999987543322110000000 00001246789999999999999999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+. |+|.+++.. ...+++.....++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~--~~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 92 GDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHK--WYFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred CCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeecccccHHHeEECCCCCEEECCccc
Confidence 78899999995 699998876 3458999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcc-----------cceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHH
Q psy520 330 VKMSETSNMK-----------TMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYL 396 (455)
Q Consensus 330 a~~~~~~~~~-----------~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~ 396 (455)
++........ ........++..|+|||.+.+ .++.++|+|||||++|||++|.+||...+.......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 245 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGR 245 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8765421100 011122356888999997754 358899999999999999999999987664322221
Q ss_pred HHh-cccchhhhcchh---------hcCCC------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 397 VVE-QEVPVREVLDKE---------AGEWN------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 397 ~~~-~~~~~~~~~d~~---------~~~~~------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+.. ...+....+... ....+ ....+..+.++|.+||..+|.+||++++++.
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 246 IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 111 000100000000 00000 0123456788999999999999999999975
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.1e-35 Score=292.51 Aligned_cols=241 Identities=27% Similarity=0.419 Sum_probs=189.5
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||+|.... +..||+|.+....... . .....+.+|+++++.++|+|++++++++.+ ...
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 90 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----N------EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA 90 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC----h------HHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCee
Confidence 789999999999999864 7889999986422111 0 013457889999999999999999998777 778
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+. |+|.+.+.... .++++.++..++.|++.|+.|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 91 ~lv~e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 165 (308)
T cd06634 91 WLVMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165 (308)
T ss_pred EEEEEccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHhEEECCCCcEEECCcccceee
Confidence 89999995 68888776432 468999999999999999999999 89999999999999999999999999998754
Q ss_pred cCCCcccceeccCCCCCCcCCccccc----CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
... ....|+..|+|||.+. +..+.++|||||||++|+|++|..||.................
T Consensus 166 ~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------- 231 (308)
T cd06634 166 APA-------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES------- 231 (308)
T ss_pred cCc-------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-------
Confidence 321 2346888999999753 3578899999999999999999999976543222211111110
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.......++..+.+||.+||..+|++||++.+|++.
T Consensus 232 ---~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 232 ---PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred ---CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 111123455668899999999999999999998763
No 345
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=9.3e-36 Score=291.06 Aligned_cols=246 Identities=26% Similarity=0.377 Sum_probs=186.1
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-CcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 250 (455)
++.+.||+|+||.||+|.+++ ++.||||.++..... . ....+..|+.++.+.. ||||+++++++.+
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-----~-------~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 85 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-----E-------ENKRILMDLDVVLKSHDCPYIVKCYGYFIT 85 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-----H-------HHHHHHHHHHHHHhccCCCchHhhheeeec
Confidence 445899999999999999875 899999999743220 0 1233566777676664 9999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...+++|||+ +++|.+.+.... .++++..+..++.+++.|++|||+. .+++||||+|+||+++.++.+||+|||+
T Consensus 86 ~~~~~~v~e~~-~~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~-~~i~H~dl~p~nill~~~~~~kL~dfg~ 161 (296)
T cd06618 86 DSDVFICMELM-STCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEK-HGVIHRDVKPSNILLDASGNVKLCDFGI 161 (296)
T ss_pred CCeEEEEeecc-CcCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhh-CCEecCCCcHHHEEEcCCCCEEECcccc
Confidence 7889999998 567777766533 3789999999999999999999962 4899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccCC-----CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccch
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-----ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
+........ .....++..|+|||.+.+. ++.++|+||||+++|+|++|..||.................
T Consensus 162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-- 235 (296)
T cd06618 162 SGRLVDSKA----KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-- 235 (296)
T ss_pred chhccCCCc----ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC--
Confidence 876533211 1234578899999977543 68899999999999999999999976432211111111110
Q ss_pred hhhcchhhcCCC-hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 REVLDKEAGEWN-ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~-~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+ ...++..+.+|+.+||..||++||++.++++
T Consensus 236 -------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 236 -------PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred -------CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00011 1124456889999999999999999999875
No 346
>KOG3653|consensus
Probab=100.00 E-value=2.6e-36 Score=294.20 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=196.4
Q ss_pred CCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHc--CCCcceecccccccC--
Q psy520 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ--CKHVNLLRLLGFCNN-- 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~-- 250 (455)
...||+|.||.||+|.+. ++.||||++.... .+.|.+|-.|.+- ++|+||+++++....
T Consensus 215 ~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~----------------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t 277 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE----------------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGT 277 (534)
T ss_pred HHHhhcCccceeehhhcc-CceeEEEecCHHH----------------HHHHHhHHHHHhccCccchhHHHhhchhccCC
Confidence 478999999999999998 5999999995321 4558888888775 589999999997543
Q ss_pred ---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-------CCCeEecCCCCCcEEECCCC
Q psy520 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-------SKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~-------~~~iiH~Dikp~NILl~~~~ 320 (455)
..++||++|.+.|||.++|..+ .++|....+|+..+++||+|||+- +.+|+|||||+.||||..|+
T Consensus 278 ~~~~eywLVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl 353 (534)
T KOG3653|consen 278 ADRMEYWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL 353 (534)
T ss_pred ccccceeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence 3789999999999999999863 689999999999999999999972 35799999999999999999
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCcccccCCC--C-----ChhhHHHHHHHHHHHHcCCCCCCC--Cchh
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI--S-----TKTDVFSYGVILLELLTGMKPIDD--NNTI 391 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--s-----~~sDi~SlGvvl~elltG~~p~~~--~~~~ 391 (455)
++.|+|||+|..+...... ..+-..+||.+|||||++.|.. . .+.||||+|.|||||++....++. ...+
T Consensus 354 TccIaDFGLAl~~~p~~~~-~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 354 TCCIADFGLALRLEPGKPQ-GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred cEEeeccceeEEecCCCCC-cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 9999999999887754422 2233479999999999997753 2 268999999999999997666532 1111
Q ss_pred hHHHHHHhcccc-hh--------hhcchhh-cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 392 LYYYLVVEQEVP-VR--------EVLDKEA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 392 ~~~~~~~~~~~~-~~--------~~~d~~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..-+..+.+..+ +. +-..+.. ..|........+++.+..||..|++-|.|+.=|.+++.++.
T Consensus 433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred cCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 111111111111 11 0111111 23334456778999999999999999999998888887664
No 347
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.6e-35 Score=281.38 Aligned_cols=250 Identities=28% Similarity=0.401 Sum_probs=197.4
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|...+.||+|++|.||+|... +++.|++|++...... ......+.+|+.++++++||||+++++.+.+
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-----------EEELEALEREIRILSSLQHPNIVRYYGSERD 70 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-----------hHHHHHHHHHHHHHHHcCCCCEeeEEEEEec
Confidence 344589999999999999987 5899999998754321 0114568899999999999999999997765
Q ss_pred ---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccc
Q psy520 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...++|+||+++++|.+++... ..+++..+..++.+++.||.|||+ .+++|+||+|+||+++.++.++|+||
T Consensus 71 ~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~--~~~~h~dl~p~ni~i~~~~~~~l~d~ 145 (260)
T cd06606 71 EEKNTLNIFLEYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHS--NGIVHRDIKGANILVDSDGVVKLADF 145 (260)
T ss_pred CCCCeEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEcCCCCEEEccc
Confidence 4678999999999999999873 379999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhh
Q psy520 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|.+......... .......++..|+|||.+.+ ..+.++|+||||+++|+|++|..||...............
T Consensus 146 ~~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------ 218 (260)
T cd06606 146 GCAKRLGDIETG-EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS------ 218 (260)
T ss_pred ccEEeccccccc-ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc------
Confidence 998876554321 01234578889999997754 4788999999999999999999999876521111111000
Q ss_pred hcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.......+...+..+.++|.+|+..+|++||++.+++.
T Consensus 219 ---~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 219 ---SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 00001112233567899999999999999999999975
No 348
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=8e-36 Score=284.05 Aligned_cols=247 Identities=25% Similarity=0.319 Sum_probs=196.3
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++..+ ++..+|+|++....... .....+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-----------KEREDAVNEIRILASVNHPNIISYKEAFLD 70 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-----------HHHHHHHHHHHHHHhCCCCCchhhhhhhcc
Confidence 445689999999999999876 47899999986533211 113457789999999999999999997766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++||||+++++|.+++..... ...+++..+..++.+++.||.|||+ .|++|+||+|+||+++.++.+||+|||
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~--~~i~h~~l~~~ni~~~~~~~~kl~d~g 148 (256)
T cd08530 71 GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE--QKILHRDLKSANILLVANDLVKIGDLG 148 (256)
T ss_pred CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEEecCCcEEEeecc
Confidence 888999999999999999866322 3568999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++...... ......|+..|+|||.+.+ .++.++|+||||+++|+|++|+.||...+........... ..
T Consensus 149 ~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~--- 218 (256)
T cd08530 149 ISKVLKKN-----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG--KY--- 218 (256)
T ss_pred chhhhccC-----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CC---
Confidence 98776543 1223468889999997644 5678999999999999999999999876533222211111 00
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ......+..+.+++.+||..+|++||++.++++
T Consensus 219 -----~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 -----P-PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -----C-CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 111244556889999999999999999999875
No 349
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.8e-35 Score=281.06 Aligned_cols=246 Identities=26% Similarity=0.416 Sum_probs=196.8
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|++|.||++..+. ++.||+|.+...... ......+.+|++++++++|||++++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-----------EEALKSIMQEIDLLKNLKHPNIVKYIGSIET 70 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-----------HHHHHHHHHHHHHHHhCCCCCccEEEEEEEe
Confidence 4566899999999999998864 789999999754321 0114568999999999999999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...+++|||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++.++|+|||+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~~l~d~~~ 145 (254)
T cd06627 71 SDSLYIILEYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHE--QGVIHRDIKAANILTTKDGVVKLADFGV 145 (254)
T ss_pred CCEEEEEEecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEECCCCCEEEecccc
Confidence 7889999999999999998873 469999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+......... .....++..|+|||...+ ..+.++|+||+|+++|+|++|..||.................
T Consensus 146 ~~~~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------ 216 (254)
T cd06627 146 ATKLNDVSKD---DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH------ 216 (254)
T ss_pred ceecCCCccc---ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC------
Confidence 8866543211 234568889999996644 467899999999999999999999986553222221111100
Q ss_pred chhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+..++..+.+++.+||..+|++||++.+++.
T Consensus 217 -----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 -----PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -----CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0011234556889999999999999999999874
No 350
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.8e-35 Score=295.34 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=186.5
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|.+. +|+.||||++....... .....+.+|+.++++++||||+++++++..
T Consensus 17 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 85 (342)
T cd07879 17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-----------IFAKRAYRELTLLKHMQHENVIGLLDVFTS 85 (342)
T ss_pred eEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-----------cchhHHHHHHHHHHhcCCCCccchhheecc
Confidence 455699999999999999976 48999999986432110 012347889999999999999999997653
Q ss_pred -------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 251 -------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 251 -------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
...++|+||+. .+|...+. ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~--~~i~H~dlkp~NIll~~~~~~k 157 (342)
T cd07879 86 AVSGDEFQDFYLVMPYMQ-TDLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHS--AGIIHRDLKPGNLAVNEDCELK 157 (342)
T ss_pred cccCCCCceEEEEecccc-cCHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEE
Confidence 24589999995 47766542 258999999999999999999999 8899999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-c
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
|+|||+++..... .....++..|+|||.+.+ .++.++|+|||||++|||++|+.||...+.......... .
T Consensus 158 L~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 231 (342)
T cd07879 158 ILDFGLARHADAE------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 231 (342)
T ss_pred EeeCCCCcCCCCC------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 9999998754321 123467889999997644 468899999999999999999999987653222211111 1
Q ss_pred ccchhhhcchh-----------hcCCCh-------hHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVREVLDKE-----------AGEWNE-------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~-----------~~~~~~-------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+.+.+.+.. ....+. ..++..+.+||.+||..||++||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 232 GVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred CCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11111110000 000000 123445778999999999999999999984
No 351
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.9e-35 Score=288.79 Aligned_cols=241 Identities=24% Similarity=0.399 Sum_probs=189.6
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
.+||+|+||.||++..+ ++..||||++..... . ....+.+|+.+++.++|+|++++++++.. +..
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 92 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ------Q-------RRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL 92 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccch------h-------HHHHHHHHHHHHHhcCCcchhheeeEEEeCCEE
Confidence 67999999999999886 488999998743211 0 13458899999999999999999997766 888
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++++|.+++.. ..+++..+..++.|++.||+|||+ .|++||||||+||+++.++.++|+|||++...
T Consensus 93 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~--~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~ 166 (292)
T cd06657 93 WVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166 (292)
T ss_pred EEEEecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEcccccceec
Confidence 999999999999987753 358999999999999999999999 89999999999999999999999999987754
Q ss_pred cCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......|++.|+|||.+. ..++.++|+||||+++|+|++|..||............... .+ ...
T Consensus 167 ~~~~---~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~-~~------~~~ 236 (292)
T cd06657 167 SKEV---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LP------PKL 236 (292)
T ss_pred cccc---ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-CC------ccc
Confidence 3321 1123356889999999664 45788999999999999999999999765433221111110 00 000
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ....++..+.+++.+|+..+|.+||++.++++
T Consensus 237 ~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 237 K--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred C--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 0 01123445788899999999999999999986
No 352
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3e-35 Score=279.33 Aligned_cols=237 Identities=27% Similarity=0.349 Sum_probs=189.5
Q ss_pred ccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||.||++.... ++.||+|.+........ .....+..|+.++++++||||+++++.+.+ ...|+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 70 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR----------KEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYL 70 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch----------HHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEE
Confidence 6999999999999864 88999999875432111 114458899999999999999999997766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.....
T Consensus 71 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~--~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 145 (250)
T cd05123 71 VLEYAPGGELFSHLSKE---GRFSEERARFYAAEIVLALEYLHS--LGIIYRDLKPENILLDADGHIKLTDFGLAKELSS 145 (250)
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence 99999999999999873 368999999999999999999999 8899999999999999999999999999876544
Q ss_pred CCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcC
Q psy520 336 SNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGE 414 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 414 (455)
.. .......++..|+|||...+ ..+.++|+||||+++|++++|..||..................+
T Consensus 146 ~~---~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 212 (250)
T cd05123 146 EG---SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRF---------- 212 (250)
T ss_pred CC---CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC----------
Confidence 32 12334578889999997644 56889999999999999999999997665422222221111111
Q ss_pred CChhHHHHHHHHHHHHhcccCcCCCCCHHH
Q psy520 415 WNETHVETLISIVFEKCCVFEKDKRASMRD 444 (455)
Q Consensus 415 ~~~~~~~~~l~~Li~~~l~~dp~~RPs~~e 444 (455)
+...+..+.+++.+|+..||++||++.+
T Consensus 213 --~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 213 --PEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred --CCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1122455788999999999999999944
No 353
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.1e-35 Score=293.68 Aligned_cols=258 Identities=22% Similarity=0.317 Sum_probs=189.4
Q ss_pred CCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|++.+.||.|+||.||+|.... |+.||+|++..... . ....+.+|++++++++||||+++++++
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~------~-------~~~~~~~Ei~~l~~l~h~~i~~~~~~~ 71 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP------Q-------SVKHALREIKIIRRLDHDNIVKVYEVL 71 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC------c-------hHHHHHHHHHHHHhcCCCcchhhHhhh
Confidence 345667999999999999999864 88999999865432 1 134578899999999999999999765
Q ss_pred cC---------------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCc
Q psy520 249 NN---------------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 313 (455)
Q Consensus 249 ~~---------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~N 313 (455)
.. ...|+||||+. ++|.+.+.. ..+++..+..++.|++.||.|||+ .|++||||||+|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~--~givH~dikp~N 144 (342)
T cd07854 72 GPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHS--ANVLHRDLKPAN 144 (342)
T ss_pred cccccccccccccccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHH
Confidence 43 24689999996 689887753 358999999999999999999999 889999999999
Q ss_pred EEEC-CCCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCch
Q psy520 314 VLLD-ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNT 390 (455)
Q Consensus 314 ILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~ 390 (455)
|+++ .++.+||+|||+++................|+..|+|||.+.+ .++.++|||||||++|+|++|..||.....
T Consensus 145 ili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~ 224 (342)
T cd07854 145 VFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE 224 (342)
T ss_pred EEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9997 5668999999998765332211111233467889999996533 467899999999999999999999987653
Q ss_pred hhHHHHHHhc-ccc-----------hhhhcchhh--cCCC----hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 391 ILYYYLVVEQ-EVP-----------VREVLDKEA--GEWN----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 391 ~~~~~~~~~~-~~~-----------~~~~~d~~~--~~~~----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.......... +.. ......... ...+ ....+..+.+||.+||..||++||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 225 LEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 3222221110 000 000000000 0000 0123456788999999999999999999974
No 354
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.1e-35 Score=280.59 Aligned_cols=251 Identities=25% Similarity=0.355 Sum_probs=192.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.++||+|+||.||++.+.. +..+++|.++......... .+ ...+..|+.++++++||||+++++++.+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNP-NE-------TVQANQEAQLLSKLDHPAIVKFHASFLE 73 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCc-ch-------HHHHHHHHHHHHhCCCCcHHHHHHHHhc
Confidence 5667899999999999998764 4556777765433211111 11 2346789999999999999999998877
Q ss_pred -cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++||||+++++|.+++.... ....+++.++..++.|++.||.|||+ .|++|+||||+||+++. +.+||+|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~~l~~~nili~~-~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ--RRILHRDLKAKNIFLKN-NLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH--cCccccCCChhheEeec-CCEeecccC
Confidence 78899999999999999886532 24579999999999999999999999 89999999999999975 579999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... .......|+..|+|||.+. ..++.++|+||||+++|+|++|..||................. +
T Consensus 151 ~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-- 223 (260)
T cd08222 151 VSRLLMGSC---DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPT--P-- 223 (260)
T ss_pred ceeecCCCc---ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC--C--
Confidence 987654322 1223456889999999664 3568899999999999999999999976543222211111110 0
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+..++..+.++|.+||..+|.+||++.++++
T Consensus 224 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 -------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 012345566888999999999999999999875
No 355
>KOG0696|consensus
Probab=100.00 E-value=2.6e-36 Score=289.04 Aligned_cols=235 Identities=28% Similarity=0.375 Sum_probs=195.4
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
.+||+|+||.|-++..++ ...||||+++++...... +.+. -+.|-++|.-. +-|.++.+..++.. +.
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdD---Dvec-------tm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDD---DVEC-------TMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeeecC---cccc-------eehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 889999999999998874 567999999988765442 2222 34577777766 56788999988888 89
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+.||+|.-.++..+ .+.++.+..++..|+-||-|||+ +|||+||||.+||+||.+|++||+|||+++.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~--kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred eeeEEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhc--CCeeeeeccccceEeccCCceEeeecccccc
Confidence 999999999999999998855 48899999999999999999999 9999999999999999999999999999986
Q ss_pred ccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchh
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
.-... ..+.+++|||.|+|||++ ...++.++|+|||||+||||+.|++||++.+.......+.......++.+...
T Consensus 500 ni~~~---~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkE 576 (683)
T KOG0696|consen 500 NIFDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKE 576 (683)
T ss_pred cccCC---cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHH
Confidence 54432 335679999999999966 45678899999999999999999999999998888777776666665554443
Q ss_pred hcCCChhHHHHHHHHHHHHhcccCcCCCC
Q psy520 412 AGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
..++....+...|.+|.
T Consensus 577 ------------Av~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 577 ------------AVAICKGLLTKHPGKRL 593 (683)
T ss_pred ------------HHHHHHHHhhcCCcccc
Confidence 44556777888888884
No 356
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.9e-35 Score=278.22 Aligned_cols=249 Identities=25% Similarity=0.388 Sum_probs=197.6
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||++.+. ++..||+|++...... ......+.+|+++++.++|||++++++.+.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~ 70 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-----------EKEREDALNEVKILKKLNHPNIIKYYESFEE 70 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-----------hHHHHHHHHHHHHHHhcCCCChhheEEEEec
Confidence 445588999999999999986 4889999998653321 0114457899999999999999999997666
Q ss_pred -cceeEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++|+||+++++|.+++.... ....+++..+..++.+++.||.|||+ .|++|+||+|+||+++.++.++|+|||
T Consensus 71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~--~~~~H~dl~~~nil~~~~~~~~l~d~~ 148 (258)
T cd08215 71 KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS--RKILHRDIKPQNIFLTSNGLVKLGDFG 148 (258)
T ss_pred CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecccCChHHeEEcCCCcEEECCcc
Confidence 78899999999999999997642 13579999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... .......|++.|+|||.+. ...+.++|+||+|+++++|++|..||...+............ .
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~--- 220 (258)
T cd08215 149 ISKVLSSTV---DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ--Y--- 220 (258)
T ss_pred ceeecccCc---ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC--C---
Confidence 987654432 1233457889999999654 457889999999999999999999998765322222111110 0
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. .+..++..+.+++.+||..+|.+||++.++++
T Consensus 221 -----~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 221 -----PP-IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -----CC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 11134456888999999999999999999875
No 357
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.1e-35 Score=284.11 Aligned_cols=257 Identities=23% Similarity=0.305 Sum_probs=190.0
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC---CCcceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC---KHVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||+|+++. ++.||+|.++....... ....+.+|+.+++++ .|||+++++++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----------~~~~~~~e~~~l~~l~~~~h~~i~~~~~~ 69 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG-----------IPLSTLREIALLKQLESFEHPNIVRLLDV 69 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccch-----------hhhhHHHHHHHHHHhhccCCCCcceEEEE
Confidence 3456899999999999999875 89999999975432110 022355677776655 69999999998
Q ss_pred ccC-cc-----eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 248 CNN-IM-----NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 248 ~~~-~~-----~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
+.+ .. .+++|||+. ++|.+++..... ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.
T Consensus 70 ~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~--~~i~h~~l~~~nili~~~~~ 145 (287)
T cd07838 70 CHGPRTDRELKLTLVFEHVD-QDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHS--HRIVHRDLKPQNILVTSDGQ 145 (287)
T ss_pred EeeccCCCCceeEEEehhcc-cCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCChhhEEEccCCC
Confidence 766 44 789999996 589998876432 358999999999999999999999 88999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 400 (455)
+||+|||++........ .....++..|+|||.+. ...+.++|+|||||++|||++|.+||...........+...
T Consensus 146 ~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd07838 146 VKIADFGLARIYSFEMA----LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDV 221 (287)
T ss_pred EEEeccCcceeccCCcc----cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHH
Confidence 99999999876543321 12345788999999764 45788999999999999999999999876533222222110
Q ss_pred -ccc--h---------hhhcchhhcCCC---hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 -EVP--V---------REVLDKEAGEWN---ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 -~~~--~---------~~~~d~~~~~~~---~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ . ............ .......+.++|.+||..||.+||++.+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 222 IGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000 0 000000000000 1234566788999999999999999999874
No 358
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.7e-36 Score=312.01 Aligned_cols=272 Identities=20% Similarity=0.264 Sum_probs=182.2
Q ss_pred CCcCCCcccccCCEEEEEEEEcC--CcEEEEEEeecccCcCCCCc----chhHhhhhhHHHHHHHHHHHHcCCCcceecc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNS----DNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~----~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
.|++.++||+|+||+||+|.++. +..+++|.+........... ............+.+|+.++++++||||+++
T Consensus 149 ~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l 228 (501)
T PHA03210 149 HFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKI 228 (501)
T ss_pred ccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcE
Confidence 46777999999999999997653 23333332211110000000 0000001124568899999999999999999
Q ss_pred cccccC-cceeEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 245 LGFCNN-IMNCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
++++.+ +..++|++++ +++|.+++....- .......++..|+.|++.||.|||+ +|||||||||+|||++.++.
T Consensus 229 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~--~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 229 EEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD--KKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred eEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCC
Confidence 998877 7788999998 5678777754221 2234466778899999999999999 89999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCC-CCCCCchh---hHHHH
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMK-PIDDNNTI---LYYYL 396 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~-p~~~~~~~---~~~~~ 396 (455)
+||+|||+++...... ........||..|+|||++.+ .++.++|||||||++|||++|.. |+...... .....
T Consensus 306 vkL~DFGla~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 306 IVLGDFGTAMPFEKER--EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred EEEEeCCCceecCccc--ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 9999999998664332 112234679999999997754 57899999999999999999875 44433211 11111
Q ss_pred HHhcccc----------hhhhcchhhcC---------CChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 397 VVEQEVP----------VREVLDKEAGE---------WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 397 ~~~~~~~----------~~~~~d~~~~~---------~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+...... +.++++...-. ......+..+.++|.+||..||++||++.|+++
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1100000 00111100000 000112334667899999999999999999986
No 359
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3.1e-35 Score=293.79 Aligned_cols=252 Identities=23% Similarity=0.374 Sum_probs=189.2
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|... ++..||||++...... . .....+.+|+.++++++||||+++++++..
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07880 17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS-----E------LFAKRAYRELRLLKHMKHENVIGLLDVFTP 85 (343)
T ss_pred eEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccc-----h------HHHHHHHHHHHHHHhcCCCCccceeeeecC
Confidence 455689999999999999876 4899999998543210 0 013457899999999999999999997654
Q ss_pred -c------ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 251 -I------MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 251 -~------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
. ..++||+|+ +++|.+++.. ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~--~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07880 86 DLSLDRFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHA--AGIIHRDLKPGNLAVNEDCELK 158 (343)
T ss_pred CccccccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEE
Confidence 2 358999998 7899888763 368999999999999999999999 8999999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc-
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ- 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~- 400 (455)
|+|||++...... .....+++.|+|||.+.+ ..+.++|+|||||++|++++|..||...+...........
T Consensus 159 l~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~ 232 (343)
T cd07880 159 ILDFGLARQTDSE------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVT 232 (343)
T ss_pred EeecccccccccC------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 9999998754322 123467889999997654 4788999999999999999999999876532222211110
Q ss_pred ccchhhhcch-----------hhcCCC-------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVREVLDK-----------EAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~-----------~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......+... ...... ...++..+.++|.+|+..||++||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 000000 0123445788999999999999999999983
No 360
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.2e-35 Score=281.80 Aligned_cols=232 Identities=24% Similarity=0.295 Sum_probs=177.5
Q ss_pred ccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHc-CCCcceecccccccC-ccee
Q psy520 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGFCNN-IMNC 254 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~-~~~~ 254 (455)
||+|+||.||++..+ ++..+|+|.+...... ..|+..... .+||||+++++.+.. ...+
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~------------------~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN------------------AIEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc------------------hhhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 599999999999976 4788999998643210 012222221 279999999997766 7889
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC-ceEEccccccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-VPKLGDFGIVKMS 333 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~ 333 (455)
+||||+++++|.+++... .++++.++..++.|++.||.|||+ .+++||||||+||+++.++ .++|+|||++...
T Consensus 86 iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHK--HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred EEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 999999999999999763 379999999999999999999999 8899999999999999998 9999999998754
Q ss_pred cCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
... ....|+..|+|||++.+ .++.++|+||||+++|||++|..||................ ...
T Consensus 161 ~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~-- 225 (267)
T PHA03390 161 GTP-------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR------QQK-- 225 (267)
T ss_pred CCC-------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh------hcc--
Confidence 322 23468899999997754 67889999999999999999999998543221111100000 000
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCCC-HHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRAS-MRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-~~evl~ 447 (455)
........+..+.++|.+||..+|.+||+ ++++++
T Consensus 226 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00111245566899999999999999996 688864
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.7e-35 Score=291.52 Aligned_cols=252 Identities=23% Similarity=0.347 Sum_probs=188.9
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||++..+ +++.||||++........ ....+.+|++++++++||||+++++++..
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 80 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-----------LAKRTYRELKLLKHLRHENIISLSDIFIS 80 (328)
T ss_pred eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccc-----------hhHHHHHHHHHHHhcCCCCeeeEeeeEec
Confidence 444599999999999999876 589999999864322110 13447789999999999999999997644
Q ss_pred --cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++++||+ +++|.+++.. .++++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~--~~iiH~dl~p~Nili~~~~~~~l~dfg 153 (328)
T cd07856 81 PLEDIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHS--AGVVHRDLKPSNILINENCDLKICDFG 153 (328)
T ss_pred CCCcEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEeECCCCCEEeCccc
Confidence 5678999998 6789887763 357888899999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccchh
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR 405 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~ 405 (455)
++...... .....++..|+|||.+.+ .++.++|+|||||++|+|+||..||.............. ...+..
T Consensus 154 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 154 LARIQDPQ------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred cccccCCC------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 98754321 123467889999997644 578899999999999999999999976653222111111 000001
Q ss_pred hhcc------------hhh--cCCCh----hHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLD------------KEA--GEWNE----THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d------------~~~--~~~~~----~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+..+ ... ...+. ..++..+.++|.+||..+|++||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1000 000 00000 123466889999999999999999999875
No 362
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.7e-35 Score=292.72 Aligned_cols=260 Identities=25% Similarity=0.357 Sum_probs=191.1
Q ss_pred HHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC
Q psy520 158 DLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC 236 (455)
Q Consensus 158 ~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 236 (455)
++..++++|. +.+.||+|+||.||+|... +++.||+|++...... ......+.+|+.+++++
T Consensus 11 ~~~~~~~~y~------~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~~~Ei~~l~~l 73 (345)
T cd07877 11 TIWEVPERYQ------NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-----------IIHAKRTYRELRLLKHM 73 (345)
T ss_pred HHhhccCceE------EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-----------hHHHHHHHHHHHHHHHc
Confidence 4445555554 4489999999999999875 5889999998643210 01134577899999999
Q ss_pred CCcceecccccccC-------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCC
Q psy520 237 KHVNLLRLLGFCNN-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 309 (455)
Q Consensus 237 ~h~niv~l~~~~~~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Di 309 (455)
+||||+++++++.. ...+++++++ +++|.+++.. ..+++..+..++.|++.||+|||+ .+++||||
T Consensus 74 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~dl 146 (345)
T cd07877 74 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS--ADIIHRDL 146 (345)
T ss_pred CCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCC
Confidence 99999999987642 3357788876 8899887764 258999999999999999999999 88999999
Q ss_pred CCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCC
Q psy520 310 KSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDD 387 (455)
Q Consensus 310 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~ 387 (455)
||+||+++.++.+||+|||+++..... .....|+..|+|||.+.+ .++.++|||||||++|||++|..||..
T Consensus 147 kp~NIll~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 147 KPSNLAVNEDCELKILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred ChHHEEEcCCCCEEEeccccccccccc------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999998754321 223568899999997644 468899999999999999999999976
Q ss_pred CchhhHHHHHHh-cccchhhhcc----h-------hhcCCC-------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 388 NNTILYYYLVVE-QEVPVREVLD----K-------EAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 388 ~~~~~~~~~~~~-~~~~~~~~~d----~-------~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.......... .......... . .....+ ....+..+.++|.+|+..||.+||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 221 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 553222111111 0100000000 0 000000 0113455789999999999999999999875
No 363
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.7e-35 Score=294.27 Aligned_cols=252 Identities=25% Similarity=0.351 Sum_probs=190.2
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|.+.. +..||||++....... .....+.+|+.++++++|||++++++++..
T Consensus 17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07851 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA-----------IHAKRTYRELRLLKHMDHENVIGLLDVFTP 85 (343)
T ss_pred eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh-----------hHHHHHHHHHHHHHhccCCCHHHHHHHhhc
Confidence 4556999999999999999864 7899999986431100 013447789999999999999999986654
Q ss_pred -c------ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 251 -I------MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 251 -~------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
. ..++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07851 86 ASSLEDFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHS--AGIIHRDLKPSNIAVNEDCELK 158 (343)
T ss_pred cccccccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEE
Confidence 3 378999998 7899998874 368999999999999999999999 8899999999999999999999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-c
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
|+|||++...... .....++..|+|||.+.+ ..+.++|||||||++||+++|..||...........+.. .
T Consensus 159 L~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~ 232 (343)
T cd07851 159 ILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLV 232 (343)
T ss_pred Ecccccccccccc------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Confidence 9999998765332 223467889999997643 468899999999999999999999986654322222111 1
Q ss_pred ccchhhhcchh------------hcC----CC--hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVREVLDKE------------AGE----WN--ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~------------~~~----~~--~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...+.... ... +. ....+..+.++|.+||..+|++||++.+|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 11111110000 000 00 0123556889999999999999999999875
No 364
>KOG2052|consensus
Probab=100.00 E-value=2.2e-35 Score=285.78 Aligned_cols=259 Identities=24% Similarity=0.389 Sum_probs=197.7
Q ss_pred CCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHc--CCCcceeccccccc--
Q psy520 174 RGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ--CKHVNLLRLLGFCN-- 249 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~-- 249 (455)
+.+.||+|.||.||+|.|. |..||||++.... ...+.+|.+|... ++|+||+.+++.-.
T Consensus 215 L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd----------------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~ 277 (513)
T KOG2052|consen 215 LQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD----------------ERSWFRETEIYQTVMLRHENILGFIAADNKD 277 (513)
T ss_pred EEEEecCccccceeecccc-CCceEEEEecccc----------------hhhhhhHHHHHHHHHhccchhhhhhhccccC
Confidence 4478999999999999998 8999999996332 2347788888776 49999999998432
Q ss_pred -C--cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC------CCCeEecCCCCCcEEECCCC
Q psy520 250 -N--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL------SKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 250 -~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~------~~~iiH~Dikp~NILl~~~~ 320 (455)
+ .+.+||.+|.+.|||+|+|.+ ..++....++++..+|.||+|||.. +..|.|||||+.|||+..+|
T Consensus 278 ~gs~TQLwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~ 353 (513)
T KOG2052|consen 278 NGSWTQLWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 353 (513)
T ss_pred CCceEEEEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC
Confidence 2 467899999999999999997 3699999999999999999999942 35699999999999999999
Q ss_pred ceEEccccccccccCCCc-ccceeccCCCCCCcCCcccccCCC-------CChhhHHHHHHHHHHHHcC----------C
Q psy520 321 VPKLGDFGIVKMSETSNM-KTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGVILLELLTG----------M 382 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~-------s~~sDi~SlGvvl~elltG----------~ 382 (455)
.+.|+|+|||........ -.......+||..|||||++.... ...+||||||.|+||++-. +
T Consensus 354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~ 433 (513)
T KOG2052|consen 354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ 433 (513)
T ss_pred cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence 999999999876554421 112235679999999999996543 2368999999999999752 4
Q ss_pred CCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
+||.+.-+....+....+..-+.+.--.....|....+-..+.+++..||..+|.-|-|+=.+-+.|.++.
T Consensus 434 ~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 434 LPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 56654321111111111111111111222356777788888999999999999999999998888887765
No 365
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1e-34 Score=280.55 Aligned_cols=256 Identities=26% Similarity=0.357 Sum_probs=193.6
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+..+.||+|+||.||+|+... ++.||+|++........ ....+.+|+.++++++|+|++++++++.+
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~-----------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 70 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEG-----------IPSTALREISLLKELKHPNIVKLLDVIHTE 70 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEecccccccc-----------ccHHHHHHHHHHHhcCCCCHHHHHhhhhcC
Confidence 345789999999999999874 89999999976531110 02347789999999999999999998877
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||++ ++|.+++.... ..+++..+..++.+++.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 71 ~~~~~v~e~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~~l~~~ni~~~~~~~~~l~d~g~~ 145 (282)
T cd07829 71 RKLYLVFEYCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHS--HRILHRDLKPQNILINRDGVLKLADFGLA 145 (282)
T ss_pred CceEEEecCcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChheEEEcCCCCEEEecCCcc
Confidence 78899999996 69999998742 369999999999999999999999 88999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-cccchhh-
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE- 406 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~- 406 (455)
+....... ......++..|+|||.+.+ ..+.++|+|||||++|||++|.+||...........+.. ...+...
T Consensus 146 ~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (282)
T cd07829 146 RAFGIPLR---TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEES 222 (282)
T ss_pred cccCCCcc---ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHH
Confidence 76543221 1223356778999996643 578899999999999999999999987653322221111 0000000
Q ss_pred ---h-----cchhhcCCC-------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 407 ---V-----LDKEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ---~-----~d~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. .+.....+. ....+..+.++|.+||..+|++||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 223 WPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 000000100 0122556889999999999999999999875
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8e-35 Score=289.38 Aligned_cols=259 Identities=23% Similarity=0.299 Sum_probs=188.5
Q ss_pred CcCCCcccccCCEEEEEEEEcC---CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||++.... +..||+|++....... .....+.+|+.+++++ .||||++++++
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 70 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKK-----------ILAKRALRELKLLRHFRGHKNITCLYDM 70 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccc-----------hhHHHHHHHHHHHHHhcCCCChheeeee
Confidence 4456889999999999999763 6789999986432110 0134578899999999 59999999985
Q ss_pred cc----C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 248 CN----N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 248 ~~----~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
+. . ...+++++|+ +++|.+++.. ...+++..+..++.|++.||.|||+ .|++||||||+||+++.++.+
T Consensus 71 ~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~givH~dlkp~Nili~~~~~~ 144 (332)
T cd07857 71 DIVFPGNFNELYLYEELM-EADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHS--ANVLHRDLKPGNLLVNADCEL 144 (332)
T ss_pred eeeccccCCcEEEEEecc-cCCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHeEEcCCCCE
Confidence 32 2 3567788888 5789998865 3468999999999999999999999 899999999999999999999
Q ss_pred EEccccccccccCCCcc-cceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh
Q psy520 323 KLGDFGIVKMSETSNMK-TMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~ 399 (455)
||+|||+++........ ........||..|+|||.+.+ .++.++|+|||||++|+|++|.+||...+..........
T Consensus 145 kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~ 224 (332)
T cd07857 145 KICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQ 224 (332)
T ss_pred EeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHH
Confidence 99999999865432211 111234678999999996643 468899999999999999999999986553211111110
Q ss_pred -cccchhhhc----ch-------hhcCCC-------hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 400 -QEVPVREVL----DK-------EAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 -~~~~~~~~~----d~-------~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
-..+..+.+ ++ .....+ ....+..+.+|+.+||..+|++||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 225 VLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 00 000000 0123456889999999999999999999864
No 367
>KOG0666|consensus
Probab=100.00 E-value=4.2e-36 Score=278.86 Aligned_cols=203 Identities=24% Similarity=0.334 Sum_probs=165.3
Q ss_pred CcCCCcccccCCEEEEEEEEcC-----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
|++..+||+|+||.||++.-++ .+.+|||+++.......- .....+|+..++.++||||+.+..
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGi-----------S~SAcREiaL~REl~h~nvi~Lv~ 94 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGI-----------SMSACREIALLRELKHPNVISLVK 94 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCc-----------CHHHHHHHHHHHHhcCCcchhHHH
Confidence 4566889999999999996442 247899999866442221 223679999999999999999998
Q ss_pred ccc--CcceeEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC---
Q psy520 247 FCN--NIMNCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN--- 319 (455)
Q Consensus 247 ~~~--~~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~--- 319 (455)
.+. +...++++||.+ -+|...++-+.. ...++...+..|++||+.|+.|||+ +-|+||||||+|||+..+
T Consensus 95 Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~--NWvlHRDLKPaNIlvmgdgpe 171 (438)
T KOG0666|consen 95 VFLSHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS--NWVLHRDLKPANILVMGDGPE 171 (438)
T ss_pred HHhccCceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh--hheeeccCCcceEEEeccCCc
Confidence 654 478899999994 678887765433 4578999999999999999999999 679999999999999877
Q ss_pred -CceEEccccccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q psy520 320 -FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDN 388 (455)
Q Consensus 320 -~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~ 388 (455)
|.+||+|||++|.+...-..-.....++-|..|.|||++.| .++.+.|+||+|||+.||+|-.+.|...
T Consensus 172 rG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 172 RGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 99999999999988765422223345678999999997755 5899999999999999999999988754
No 368
>KOG1006|consensus
Probab=100.00 E-value=1.3e-36 Score=276.91 Aligned_cols=262 Identities=29% Similarity=0.352 Sum_probs=194.8
Q ss_pred cceeeeHHHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHH
Q psy520 150 ELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFEN 228 (455)
Q Consensus 150 ~~~~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (455)
.+..|+-.+|+.. ..||.|+||+|++-.++. |+..|||+++.... . ...+++..
T Consensus 57 ~~~~F~~~~Lqdl-------------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~------~------keq~rll~ 111 (361)
T KOG1006|consen 57 HLHTFTSDNLQDL-------------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI------E------KEQKRLLM 111 (361)
T ss_pred cccccccchHHHH-------------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc------h------HHHHHHHH
Confidence 4555666666554 679999999999998874 89999999975543 1 11456788
Q ss_pred HHHHHHc-CCCcceecccccccC-cceeEEEEeccCCCHHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCe
Q psy520 229 EVQTLSQ-CKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARV--NNTPPLDSNKRYSIALGVAEALHYLHSLSKPI 304 (455)
Q Consensus 229 E~~~l~~-l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~i 304 (455)
|.+...+ -..||||++||.+.. +..++.||+| ..||..+-... -....+++...-.|+..++.||.||-+. ..|
T Consensus 112 e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~-lki 189 (361)
T KOG1006|consen 112 EHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE-LKI 189 (361)
T ss_pred HHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH-hhh
Confidence 8876544 479999999996654 8888999999 56765433211 1134689999999999999999999874 579
Q ss_pred EecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC---CCCChhhHHHHHHHHHHHHcC
Q psy520 305 IHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTG 381 (455)
Q Consensus 305 iH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~s~~sDi~SlGvvl~elltG 381 (455)
||||+||+|||+|..|.+||||||.+-....+-. .+.-.|..+|||||.+.. +++.+||+||||++|||+.||
T Consensus 190 IHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA----kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG 265 (361)
T KOG1006|consen 190 IHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA----KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATG 265 (361)
T ss_pred hhccCChhheEEecCCCEeeecccchHhHHHHHH----hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecC
Confidence 9999999999999999999999999876544322 234478899999997632 478899999999999999999
Q ss_pred CCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 382 MKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 382 ~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..||.+.+.............+..-..+.. .-+.+..+..+|..|+.+|...||..+++.+
T Consensus 266 ~fPyr~w~svfeql~~Vv~gdpp~l~~~~~-----~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 266 NFPYRKWDSVFEQLCQVVIGDPPILLFDKE-----CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CCCcchHHHHHHHHHHHHcCCCCeecCccc-----ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 999998775433333222221111111111 1134455788899999999999999998864
No 369
>KOG0607|consensus
Probab=100.00 E-value=3.7e-35 Score=273.38 Aligned_cols=259 Identities=25% Similarity=0.374 Sum_probs=201.1
Q ss_pred eeeeHHHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEE-cCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHH
Q psy520 152 IAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEV 230 (455)
Q Consensus 152 ~~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 230 (455)
..-.+.|+-+.|. +.||+|+++.|-.+.. .+|..||||++.+... ..+.+..+|+
T Consensus 71 ~~g~F~d~YkLt~-----------e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g-------------HsR~RvfREV 126 (463)
T KOG0607|consen 71 LSGKFEDMYKLTS-----------ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG-------------HSRSRVFREV 126 (463)
T ss_pred ccchHHHHHHhHH-----------HHhcCccceeeeeeeeeccchhhhhhhhhcCCc-------------hHHHHHHHHH
Confidence 3345677777766 6799999999998874 5689999999975422 1145578999
Q ss_pred HHHHcCC-CcceecccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecC
Q psy520 231 QTLSQCK-HVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRD 308 (455)
Q Consensus 231 ~~l~~l~-h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~D 308 (455)
+++.+|+ |+||+.+++|+.+ ..+|||||-|.||+|..++++. ..+++..+..++.+|+.||.|||. +||.|||
T Consensus 127 e~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~---~~F~E~EAs~vvkdia~aLdFlH~--kgIAHRD 201 (463)
T KOG0607|consen 127 ETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKR---KHFNEREASRVVKDIASALDFLHT--KGIAHRD 201 (463)
T ss_pred HHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHh---hhccHHHHHHHHHHHHHHHHHHhh--cCccccc
Confidence 9999995 9999999999988 7889999999999999999984 469999999999999999999999 9999999
Q ss_pred CCCCcEEECCC---CceEEccccccccccCCCc----ccceeccCCCCCCcCCcccc---cCC---CCChhhHHHHHHHH
Q psy520 309 VKSANVLLDEN---FVPKLGDFGIVKMSETSNM----KTMYTENLTGTRPYMPPEAM---HCQ---ISTKTDVFSYGVIL 375 (455)
Q Consensus 309 ikp~NILl~~~---~~~kl~DFGla~~~~~~~~----~~~~~~~~~gt~~Y~aPE~~---~~~---~s~~sDi~SlGvvl 375 (455)
+||+|||-... .-+||+||.+..-...... .+....+.+|+..|||||+. .++ ++.+.|.|||||||
T Consensus 202 lKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIl 281 (463)
T KOG0607|consen 202 LKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVIL 281 (463)
T ss_pred CCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHH
Confidence 99999998643 4589999988653322211 12223457899999999954 343 67799999999999
Q ss_pred HHHHcCCCCCCCCc---------------hhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC
Q psy520 376 LELLTGMKPIDDNN---------------TILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 376 ~elltG~~p~~~~~---------------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
|-||+|.+||.+.- +......+.++...++ +..-..++...++|+..++..|+.+|.
T Consensus 282 YImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFP--------dkdWahIS~eakdlisnLlvrda~~rl 353 (463)
T KOG0607|consen 282 YIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFP--------DKDWAHISSEAKDLISNLLVRDAKQRL 353 (463)
T ss_pred HHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCC--------hhhhHHhhHHHHHHHHHHHhccHHhhh
Confidence 99999999997643 1122222222211111 112246788899999999999999999
Q ss_pred CHHHHHH
Q psy520 441 SMRDIVD 447 (455)
Q Consensus 441 s~~evl~ 447 (455)
++.+|++
T Consensus 354 sa~~vln 360 (463)
T KOG0607|consen 354 SAAQVLN 360 (463)
T ss_pred hhhhccC
Confidence 9998876
No 370
>KOG0662|consensus
Probab=100.00 E-value=7.3e-35 Score=251.52 Aligned_cols=253 Identities=23% Similarity=0.305 Sum_probs=195.0
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
++||+|+||+||+|+..+ +..||+|.++.+.....- .....+|+-+++.++|.|||++++.... ...
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddegv-----------pssalreicllkelkhknivrl~dvlhsdkkl 76 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGV-----------PSSALREICLLKELKHKNIVRLHDVLHSDKKL 76 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCC-----------cHHHHHHHHHHHHhhhcceeehhhhhccCcee
Confidence 789999999999999764 788999999865542221 2337799999999999999999997654 788
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
.+|+||| ..+|..+....++ .++...+..++.|+++||.|+|+ +++.|||+||.|+|++.+|.+|++|||+++.+
T Consensus 77 tlvfe~c-dqdlkkyfdslng--~~d~~~~rsfmlqllrgl~fchs--hnvlhrdlkpqnllin~ngelkladfglaraf 151 (292)
T KOG0662|consen 77 TLVFEFC-DQDLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHS--HNVLHRDLKPQNLLINRNGELKLADFGLARAF 151 (292)
T ss_pred EEeHHHh-hHHHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhh--hhhhhccCCcceEEeccCCcEEecccchhhhc
Confidence 9999999 6788888877644 68999999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHh--c---c---c
Q psy520 334 ETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVE--Q---E---V 402 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~--~---~---~ 402 (455)
+... ...+.-+-|..|.+|.++.| -+++..|+||.||++.|+.. |++.|.+.+.......+.. + + .
T Consensus 152 gipv---rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wp 228 (292)
T KOG0662|consen 152 GIPV---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWP 228 (292)
T ss_pred CCce---EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCC
Confidence 6542 12334466899999997765 37899999999999999998 7777887774433333322 1 1 1
Q ss_pred chhhhcchhh-cCCCh--------hHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 403 PVREVLDKEA-GEWNE--------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~-~~~~~--------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.+.-|-.. ..++. +.....-++|+.+.+.-+|.+|.++++.++
T Consensus 229 s~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 229 SMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 1122222222 11111 123334578899999999999999998765
No 371
>KOG1151|consensus
Probab=100.00 E-value=5.2e-36 Score=289.12 Aligned_cols=281 Identities=25% Similarity=0.348 Sum_probs=213.5
Q ss_pred ceeeeHHHHHHhhcC----CCCCC----CCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhh
Q psy520 151 LIAFTFCDLERATDG----FNRKP----YPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMI 221 (455)
Q Consensus 151 ~~~~~~~~l~~~t~~----f~~~~----~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~ 221 (455)
+...-..||.++.+. |..-| +|.+..+||+|||+.||++.+-. .+.||||+-.......+.+. ..
T Consensus 436 vrnlHiRELKRi~NEdnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKK------eN 509 (775)
T KOG1151|consen 436 VRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKK------EN 509 (775)
T ss_pred HHHHHHHHHHhhcccchhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhh------hh
Confidence 344555667666543 44332 35677899999999999999754 78899998765544333221 11
Q ss_pred hHHHHHHHHHHHHcCCCcceecccccc-cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy520 222 PILLFENEVQTLSQCKHVNLLRLLGFC-NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHS 299 (455)
Q Consensus 222 ~~~~~~~E~~~l~~l~h~niv~l~~~~-~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~ 299 (455)
..+...+|..|-+.+.||.||++|+|+ .+ +.+|-|+|||+|.+|.-+|.. +..+++..+..|+.||+.||.||.+
T Consensus 510 YhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YLNE 586 (775)
T KOG1151|consen 510 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYLNE 586 (775)
T ss_pred HHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 245578999999999999999999976 34 788999999999999999987 4569999999999999999999999
Q ss_pred CCCCeEecCCCCCcEEEC---CCCceEEccccccccccCCCccc----ceeccCCCCCCcCCcccc-cC----CCCChhh
Q psy520 300 LSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNMKT----MYTENLTGTRPYMPPEAM-HC----QISTKTD 367 (455)
Q Consensus 300 ~~~~iiH~Dikp~NILl~---~~~~~kl~DFGla~~~~~~~~~~----~~~~~~~gt~~Y~aPE~~-~~----~~s~~sD 367 (455)
...+|||-||||.||||- ..|.+||.|||+++......... ..++...||.+|+|||.| .| +++.++|
T Consensus 587 ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVD 666 (775)
T KOG1151|consen 587 IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVD 666 (775)
T ss_pred cCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCcccccee
Confidence 878999999999999994 45899999999999887654432 345678999999999955 33 3688999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHH
Q psy520 368 VFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 368 i~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
|||+|||+|.++.|+.||..+-...... ....+.+.-. ....+.+.++...++||.+||....++|....++.
T Consensus 667 VWSvGVIFyQClYGrKPFGhnqsQQdIL----qeNTIlkAtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 667 VWSVGVIFYQCLYGRKPFGHNQSQQDIL----QENTILKATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred eEeeehhhhhhhccCCCCCCchhHHHHH----hhhchhccee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 9999999999999999998764211100 1111111100 11223456677788999999999999999887764
No 372
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.6e-34 Score=310.10 Aligned_cols=145 Identities=29% Similarity=0.338 Sum_probs=126.1
Q ss_pred CcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.++||+|+||+||+|.+. +++.||||+++...... ......+..|+.+++.++||||+++++++..
T Consensus 6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 75 (669)
T cd05610 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN----------KNMVHQVQAERDALALSKSPFIVHLYYSLQS 75 (669)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC----------HHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE
Confidence 456699999999999999987 48899999997532210 0114568899999999999999999987766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+.+++|.+++... ..+++..++.|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~~lVmEy~~g~~L~~li~~~---~~l~~~~~~~i~~qil~aL~yLH~--~gIiHrDLKP~NILl~~~g~vkL~DFGl 150 (669)
T cd05610 76 ANNVYLVMEYLIGGDVKSLLHIY---GYFDEEMAVKYISEVALALDYLHR--HGIIHRDLKPDNMLISNEGHIKLTDFGL 150 (669)
T ss_pred CCEEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCccHHHEEEcCCCCEEEEeCCC
Confidence 7889999999999999999763 358899999999999999999999 8999999999999999999999999999
Q ss_pred cc
Q psy520 330 VK 331 (455)
Q Consensus 330 a~ 331 (455)
++
T Consensus 151 s~ 152 (669)
T cd05610 151 SK 152 (669)
T ss_pred Cc
Confidence 86
No 373
>KOG1035|consensus
Probab=100.00 E-value=3.9e-35 Score=312.29 Aligned_cols=252 Identities=25% Similarity=0.380 Sum_probs=181.5
Q ss_pred HHhhcCCCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCC
Q psy520 160 ERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH 238 (455)
Q Consensus 160 ~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 238 (455)
.+..+.|-+. ..||+||||.||+++.+ +|+.||||++..... + .......+|+..|++++|
T Consensus 475 SRY~~DFEEL------~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s------~------~~~skI~rEVk~LArLnH 536 (1351)
T KOG1035|consen 475 SRYLNDFEEL------ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKAS------D------KLYSKILREVKLLARLNH 536 (1351)
T ss_pred hhHhhhhHHH------HHhcCCCCceEEEEeecccchhhhhhhccCchH------H------HHHHHHHHHHHHHhhcCC
Confidence 4555556554 89999999999999987 699999999975531 1 013347799999999999
Q ss_pred cceecccccc---------------------------------------------------------c------------
Q psy520 239 VNLLRLLGFC---------------------------------------------------------N------------ 249 (455)
Q Consensus 239 ~niv~l~~~~---------------------------------------------------------~------------ 249 (455)
||||+++..+ .
T Consensus 537 pNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~ 616 (1351)
T KOG1035|consen 537 PNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESST 616 (1351)
T ss_pred cceeeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccC
Confidence 9999976210 0
Q ss_pred -------------------------------------------C--------cceeEEEEeccCCCHHHHHhhcCCCCCC
Q psy520 250 -------------------------------------------N--------IMNCIVYEYMCNGSLYDRLARVNNTPPL 278 (455)
Q Consensus 250 -------------------------------------------~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~l 278 (455)
+ ...||=||||+..+|.+.+.+.. ..
T Consensus 617 d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~---~~ 693 (1351)
T KOG1035|consen 617 DEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH---FN 693 (1351)
T ss_pred CcccccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc---cc
Confidence 0 01256789998888888777632 12
Q ss_pred -CHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccccc----C----------CCc-ccce
Q psy520 279 -DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE----T----------SNM-KTMY 342 (455)
Q Consensus 279 -~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~----~----------~~~-~~~~ 342 (455)
.....++++++|+.||.|+|+ .|||||||||.||++|+++.+||+|||+|.... . ... ....
T Consensus 694 ~~~d~~wrLFreIlEGLaYIH~--~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~ 771 (1351)
T KOG1035|consen 694 SQRDEAWRLFREILEGLAYIHD--QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGD 771 (1351)
T ss_pred hhhHHHHHHHHHHHHHHHHHHh--CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcc
Confidence 467789999999999999999 889999999999999999999999999998721 0 000 1112
Q ss_pred eccCCCCCCcCCcccccC----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh---hhcchhhcCC
Q psy520 343 TENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR---EVLDKEAGEW 415 (455)
Q Consensus 343 ~~~~~gt~~Y~aPE~~~~----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~ 415 (455)
.+..+||.-|+|||++.+ .++.|+|+||+|||++||+. ||............. ....++ .+.++.
T Consensus 772 ~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~L-R~g~iP~~~~f~~~~---- 843 (1351)
T KOG1035|consen 772 LTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNL-RKGSIPEPADFFDPE---- 843 (1351)
T ss_pred cccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhc-ccCCCCCCccccccc----
Confidence 345789999999998854 47889999999999999984 566443211111111 111111 112222
Q ss_pred ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 416 NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 416 ~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++. -..+|.+++.+||.+|||+.|+++
T Consensus 844 ----~~~-e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 844 ----HPE-EASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ----chH-HHHHHHHHhcCCCccCCCHHHHhh
Confidence 122 345688999999999999999975
No 374
>KOG0612|consensus
Probab=100.00 E-value=2.5e-35 Score=311.52 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=197.1
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.|..++.+. ++.||+|++++...... . ....|..|-.+|.....+=|+.+.-.+.|
T Consensus 78 eilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr---~-------~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 78 EILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKR---A-------ETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhc---h-------hHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 344899999999999999875 78899999976322111 1 13448888999999999999999776666
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.+.|+|||||+||+|..++.+.+ ++++..+..++..++.||.-||+ -|+|||||||+|||||..|++||+|||.|
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~--mgyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS--MGYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh--ccceeccCCcceeEecccCcEeeccchhH
Confidence 89999999999999999999854 69999999999999999999999 78999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc------CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc--cc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ--EV 402 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~ 402 (455)
-..... .+...+..+|||.|++||++. |.+....|+||+||++|||+.|..||........+-.+... ..
T Consensus 223 lkm~~d--G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l 300 (1317)
T KOG0612|consen 223 LKMDAD--GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESL 300 (1317)
T ss_pred HhcCCC--CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhc
Confidence 766544 334456789999999999872 45788999999999999999999999988866666666543 22
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCC---HHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS---MRDIV 446 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs---~~evl 446 (455)
.++ +...++...++||.+ +.-+|.+|.. ++++-
T Consensus 301 ~FP----------~~~~VSeeakdLI~~-ll~~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 301 SFP----------DETDVSEEAKDLIEA-LLCDREVRLGRNGIEDIK 336 (1317)
T ss_pred CCC----------cccccCHHHHHHHHH-HhcChhhhcccccHHHHH
Confidence 222 123466678887764 4445666665 66653
No 375
>KOG0614|consensus
Probab=100.00 E-value=1.3e-35 Score=290.53 Aligned_cols=239 Identities=27% Similarity=0.370 Sum_probs=199.7
Q ss_pred CCCcccccCCEEEEEEEEcCCc-EEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 174 RGNKLGEGQFGTVYYGKLKNGM-EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~-~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+..-||-||||.|=++..++.. .+|+|.+++........ .+....|-.||..+++|.||++|..+.+ .
T Consensus 424 ~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQ----------qeHv~sEr~Im~~~~s~fIvrLYrTfrd~k 493 (732)
T KOG0614|consen 424 RIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQ----------QEHVFSERNIMMECRSDFIVRLYRTFRDSK 493 (732)
T ss_pred hhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhH----------HHHHHhHHHHHHhcCchHHHHHHHHhccch
Confidence 3467999999999999987533 48999998765533211 3447789999999999999999998877 7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|++||-|-||.|...|+.. +.++......++..++.|+.|||+ +|||+|||||+|.++|.+|.+||.|||+|+
T Consensus 494 yvYmLmEaClGGElWTiLrdR---g~Fdd~tarF~~acv~EAfeYLH~--k~iIYRDLKPENllLd~~Gy~KLVDFGFAK 568 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDR---GSFDDYTARFYVACVLEAFEYLHR--KGIIYRDLKPENLLLDNRGYLKLVDFGFAK 568 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhc---CCcccchhhhhHHHHHHHHHHHHh--cCceeccCChhheeeccCCceEEeehhhHH
Confidence 889999999999999999984 469999999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCcccceeccCCCCCCcCCcc-cccCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcch
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE-~~~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
...... .+.+++|||.|.||| ++..+-+.++|.||||+++||||+|.+||...++...+..+..+- |.
T Consensus 569 ki~~g~----KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi-------d~ 637 (732)
T KOG0614|consen 569 KIGSGR----KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI-------DK 637 (732)
T ss_pred HhccCC----ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh-------hh
Confidence 887654 356789999999999 556678899999999999999999999999998877766665421 11
Q ss_pred hhcCCChhHHHHHHHHHHHHhcccCcCCCCC
Q psy520 411 EAGEWNETHVETLISIVFEKCCVFEKDKRAS 441 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs 441 (455)
. .+| ..+.+...+||.++|..+|..|..
T Consensus 638 i--~~P-r~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 I--EFP-RRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred h--hcc-cccchhHHHHHHHHHhcCcHhhhc
Confidence 1 111 345555788899999999998865
No 376
>KOG0604|consensus
Probab=100.00 E-value=5.7e-35 Score=270.13 Aligned_cols=239 Identities=25% Similarity=0.308 Sum_probs=190.1
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC---
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN--- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~--- 250 (455)
.+||-|-.|.|-.+..+ +|..+|+|++... ....+|++.--.. .|||||.+++.+.+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds------------------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS------------------PKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC------------------HHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 78999999999999887 4899999999521 2256888876665 69999999997654
Q ss_pred --cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC---CCCceEEc
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLG 325 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~---~~~~~kl~ 325 (455)
....+|||.|+||.|+.+++..+ ..++++.++..|+.||..|+.|||+ .+|.||||||+|+|.. .|..+||+
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~--~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHS--MNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHh--cchhhccCChhheeeecCCCCcceEec
Confidence 33456999999999999999865 4679999999999999999999999 7899999999999996 46789999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhh----HHHHHHhc
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTIL----YYYLVVEQ 400 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~----~~~~~~~~ 400 (455)
|||+|+...... .-.+.+-|+.|.|||++.. +++...|+||+||++|-||+|.+||..+.... +...+..+
T Consensus 207 DfGFAK~t~~~~----~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g 282 (400)
T KOG0604|consen 207 DFGFAKETQEPG----DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG 282 (400)
T ss_pred ccccccccCCCc----cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc
Confidence 999998755322 2345688999999998865 57888999999999999999999998765311 11111111
Q ss_pred ccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+ ....-+.+++..+++|.++|..+|.+|.++.++.+
T Consensus 283 qy~F--------P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 283 QYEF--------PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CccC--------CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1110 11112567888999999999999999999999875
No 377
>KOG1025|consensus
Probab=100.00 E-value=7.8e-35 Score=298.51 Aligned_cols=252 Identities=25% Similarity=0.400 Sum_probs=203.5
Q ss_pred CCcccccCCEEEEEEEEc-C----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 175 GNKLGEGQFGTVYYGKLK-N----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.++||+|+||+||+|.|- . .-+||||++......+. ...+..|.-+|.+++|||+++++|+|.
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~------------s~e~LdeAl~masldHpnl~RLLgvc~ 768 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKA------------SIELLDEALRMASLDHPNLLRLLGVCM 768 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchh------------hHHHHHHHHHHhcCCCchHHHHhhhcc
Confidence 389999999999999873 1 45789999875543211 334889999999999999999999999
Q ss_pred CcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 250 NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 250 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
....-||.+||+.|+|.|+++.++ .++.....+.|..|||+|+.|||+ +.++||||-..||||..-..+||.|||+
T Consensus 769 ~s~~qlvtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~--qrlVHrdLaaRNVLVksP~hvkitdfgl 844 (1177)
T KOG1025|consen 769 LSTLQLVTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEE--QRLVHRDLAARNVLVKSPNHVKITDFGL 844 (1177)
T ss_pred cchHHHHHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHh--cchhhhhhhhhheeecCCCeEEEEecch
Confidence 888889999999999999999854 478899999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... ...+....-.+.|||=|.+ ...++.+||||||||++||++| |..||++......- ++
T Consensus 845 a~ll~~d~~-ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~-----------dl 912 (1177)
T KOG1025|consen 845 AKLLAPDEK-EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP-----------DL 912 (1177)
T ss_pred hhccCcccc-cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh-----------HH
Confidence 998766542 2222233335568888854 5678999999999999999999 99999987644332 23
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+.....-..+.-++..+.-++.+||..|++.||+++++...+.+...
T Consensus 913 le~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 913 LEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 32222222334455556667889999999999999999999987754
No 378
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=5.5e-34 Score=269.73 Aligned_cols=218 Identities=20% Similarity=0.215 Sum_probs=172.3
Q ss_pred cCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeEEEE
Q psy520 181 GQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCIVYE 258 (455)
Q Consensus 181 G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~lV~e 258 (455)
|.||.||++.++ +++.||+|+++.... +.+|...+....||||+++++++.+ ...++|||
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 65 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE------------------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQ 65 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh------------------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEe
Confidence 899999999986 488999999964321 3345555566679999999998776 78899999
Q ss_pred eccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCc
Q psy520 259 YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 338 (455)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 338 (455)
|+++|+|.+++... .++++..+..++.|++.||.|||+ ++++||||||+||+++.++.++++|||.+......
T Consensus 66 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-- 138 (237)
T cd05576 66 HAEGGKLWSHISKF---LNIPEECVKRWAAEMVVALDALHR--EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-- 138 (237)
T ss_pred cCCCCCHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEEcCCCCEEEecccchhccccc--
Confidence 99999999999763 458999999999999999999999 89999999999999999999999999987654332
Q ss_pred ccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCCh
Q psy520 339 KTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNE 417 (455)
Q Consensus 339 ~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 417 (455)
.....++..|+|||... +.++.++|+||+|+++|||++|..|+......... ..... .+
T Consensus 139 ----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~----~~~~~------------~~ 198 (237)
T cd05576 139 ----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINT----HTTLN------------IP 198 (237)
T ss_pred ----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhccc----ccccC------------Cc
Confidence 12335677899999775 45788999999999999999999887643211000 00000 11
Q ss_pred hHHHHHHHHHHHHhcccCcCCCCCHH
Q psy520 418 THVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 418 ~~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
..++..+.++|.+|+..||++||++.
T Consensus 199 ~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 199 EWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred ccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 22345578899999999999999973
No 379
>KOG0669|consensus
Probab=100.00 E-value=1.2e-35 Score=268.69 Aligned_cols=259 Identities=24% Similarity=0.364 Sum_probs=190.3
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+...+||+|.||.||+++.++ |+.||+|++--...... . .....+|+.+|..++|+|++.+++.|..
T Consensus 20 ek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeG----------f-pitalreikiL~~lkHenv~nliEic~tk 88 (376)
T KOG0669|consen 20 EKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEG----------F-PITALREIKILQLLKHENVVNLIEICRTK 88 (376)
T ss_pred HHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccC----------C-cHHHHHHHHHHHHhcchhHHHHHHHHhhc
Confidence 334789999999999999875 88899988743222111 1 1225789999999999999999987732
Q ss_pred --------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCce
Q psy520 251 --------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 251 --------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
...++|+.+|+ -+|.-.|... ...++...+.+++.+++.||.|+|+ ..|+|||+|++|+||+.+|.+
T Consensus 89 ~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iHr--~kilHRDmKaaNvLIt~dgil 163 (376)
T KOG0669|consen 89 ATPTNRDRATFYLVFDFCE-HDLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIHR--NKILHRDMKAANVLITKDGIL 163 (376)
T ss_pred cCCcccccceeeeeHHHhh-hhHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHHH--hhHHhhcccHhhEEEcCCceE
Confidence 34689999994 5777777653 2468999999999999999999999 779999999999999999999
Q ss_pred EEccccccccccCCCccc-ceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh
Q psy520 323 KLGDFGIVKMSETSNMKT-MYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~ 399 (455)
||+|||+++.+....... ......+-|..|++||.+.| .++++.|||..|||+.||+||.+-+.++........+..
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~ 243 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQ 243 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHH
Confidence 999999998765543211 11233456999999997655 578999999999999999999999988874433333322
Q ss_pred --c-----------ccchhhhcchh-hcCCChhHH---------HHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 400 --Q-----------EVPVREVLDKE-AGEWNETHV---------ETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 --~-----------~~~~~~~~d~~-~~~~~~~~~---------~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+ +.++-+.+... .+......+ .....+|+.+++..||.+|++++++++
T Consensus 244 LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 244 LCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred HhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 1 11111111100 011111111 124567899999999999999999875
No 380
>KOG0200|consensus
Probab=100.00 E-value=1.3e-33 Score=300.81 Aligned_cols=253 Identities=29% Similarity=0.449 Sum_probs=200.1
Q ss_pred CCCcccccCCEEEEEEEEcC--------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecc
Q psy520 174 RGNKLGEGQFGTVYYGKLKN--------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRL 244 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 244 (455)
+.+.||+|.||.|++|..+. ...||||.++...... ....+..|+++++.+ +|+||+.+
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~------------~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSS------------EKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcH------------HHHHHHHHHHHHHHhcCCcchhhh
Confidence 45789999999999998541 3578999997654421 145699999999999 69999999
Q ss_pred cccccC-cceeEEEEeccCCCHHHHHhhcC---C--C--------CCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCC
Q psy520 245 LGFCNN-IMNCIVYEYMCNGSLYDRLARVN---N--T--------PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 310 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~---~--~--------~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dik 310 (455)
+|+|.. +..++|.||+..|+|.++|.... . . ..++....+.++.|||.|++||++ .++|||||-
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~--~~~vHRDLA 445 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS--VPCVHRDLA 445 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh--CCccchhhh
Confidence 999988 88899999999999999998866 0 1 248999999999999999999999 889999999
Q ss_pred CCcEEECCCCceEEccccccccccCCCcccceeccCCCCC--CcCCcccccC-CCCChhhHHHHHHHHHHHHc-CCCCCC
Q psy520 311 SANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR--PYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID 386 (455)
Q Consensus 311 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~--~Y~aPE~~~~-~~s~~sDi~SlGvvl~ellt-G~~p~~ 386 (455)
..|||+.++..+||+|||+++.......... ..-.|+. .|||||.+.. .++.+||||||||+||||+| |..||.
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~--~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp 523 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRT--KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYP 523 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEe--cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCC
Confidence 9999999999999999999997655432221 1222323 4999997654 68999999999999999999 999998
Q ss_pred CCc-hhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 387 DNN-TILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 387 ~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
+.. ...... .+........+..+...+.+++..||+.+|++||++.++.+.|+..+
T Consensus 524 ~~~~~~~l~~-----------~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 524 GIPPTEELLE-----------FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCcHHHHHH-----------HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 743 111111 11111122233445666778999999999999999999999998854
No 381
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=4.4e-33 Score=294.01 Aligned_cols=256 Identities=20% Similarity=0.206 Sum_probs=164.3
Q ss_pred CCCcCCCcccccCCEEEEEEEEcC-----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKN-----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
..|.+.++||+|+||.||+|.+.+ +..||||++..... .+.+..+ .+.+..+.++..+
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---------------~e~~~~e--~l~~~~~~~~~~~ 194 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---------------VEIWMNE--RVRRACPNSCADF 194 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---------------hHHHHHH--HHHhhchhhHHHH
Confidence 356777999999999999999863 58999998753211 0111111 1122222233322
Q ss_pred ccc-------ccCcceeEEEEeccCCCHHHHHhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHcC
Q psy520 245 LGF-------CNNIMNCIVYEYMCNGSLYDRLARVNN-----------------TPPLDSNKRYSIALGVAEALHYLHSL 300 (455)
Q Consensus 245 ~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------------~~~l~~~~~~~i~~~i~~gL~~LH~~ 300 (455)
+.. ..+...++||||+.+++|.+++..... ........+..++.|++.||.|||+
T Consensus 195 ~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~- 273 (566)
T PLN03225 195 VYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS- 273 (566)
T ss_pred HHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-
Confidence 221 123678999999999999999875321 0111234466899999999999999
Q ss_pred CCCeEecCCCCCcEEECC-CCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC-------------------
Q psy520 301 SKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------------------- 360 (455)
Q Consensus 301 ~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------------------- 360 (455)
++|+||||||+|||++. ++.+||+|||+++...... ........||+.|+|||.+..
T Consensus 274 -~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~ 350 (566)
T PLN03225 274 -TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPV 350 (566)
T ss_pred -CCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--ccCCcccccCCCccChHHhhccCCCCCCccccccccccch
Confidence 89999999999999985 6899999999998654322 122345688999999995421
Q ss_pred ----CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh---cchhhcC-----CC-hhHHHHHHHHH
Q psy520 361 ----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV---LDKEAGE-----WN-ETHVETLISIV 427 (455)
Q Consensus 361 ----~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~d~~~~~-----~~-~~~~~~~l~~L 427 (455)
.++.++||||||||+|||+++..+++...... .............+ ..+.... +. .+.......+|
T Consensus 351 l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dL 429 (566)
T PLN03225 351 LWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQF-NRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWEL 429 (566)
T ss_pred hccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHH-HHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHH
Confidence 12345699999999999999877655332111 11111111111111 1111000 00 00112234489
Q ss_pred HHHhcccCcCCCCCHHHHHH
Q psy520 428 FEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 428 i~~~l~~dp~~RPs~~evl~ 447 (455)
|.+|+..||++|||++++++
T Consensus 430 i~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 430 LKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHccCCcccCCCHHHHhC
Confidence 99999999999999999976
No 382
>KOG4236|consensus
Probab=100.00 E-value=1.7e-34 Score=283.55 Aligned_cols=243 Identities=25% Similarity=0.361 Sum_probs=190.8
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||.|.||+||-|+++ +|+.||||++.+...... . ..++.+|+.||.+++||.||.+--.|+. +..
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k---q--------esqlR~EVaILq~l~HPGiV~le~M~ET~erv 638 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK---Q--------ESQLRNEVAILQNLHHPGIVNLECMFETPERV 638 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCc---h--------HHHHHHHHHHHHhcCCCCeeEEEEeecCCceE
Confidence 68999999999999876 599999999976543211 1 3458899999999999999999988887 788
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC---CceEEcccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN---FVPKLGDFGIV 330 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~---~~~kl~DFGla 330 (455)
+.|||-+ +|+..+.+-..+ .+.|++.....++.||+.||.|||- ++|+|.||||+|||+... -++||||||+|
T Consensus 639 FVVMEKl-~GDMLEMILSsE-kgRL~er~TkFlvtQIL~ALr~LH~--knIvHCDLKPENVLLas~~~FPQvKlCDFGfA 714 (888)
T KOG4236|consen 639 FVVMEKL-HGDMLEMILSSE-KGRLPERITKFLVTQILVALRYLHF--KNIVHCDLKPENVLLASASPFPQVKLCDFGFA 714 (888)
T ss_pred EEEehhh-cchHHHHHHHhh-cccchHHHHHHHHHHHHHHHHHhhh--cceeeccCCchheeeccCCCCCceeeccccce
Confidence 8999999 555555554433 3579999999999999999999999 899999999999999644 47999999999
Q ss_pred ccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcc
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
|+.+.... ...++||++|+|||++. .+++...|+||.|||+|--|+|..||.+..+... .+.... ++-
T Consensus 715 RiIgEksF----RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdInd--QIQNAa-----FMy 783 (888)
T KOG4236|consen 715 RIIGEKSF----RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIND--QIQNAA-----FMY 783 (888)
T ss_pred eecchhhh----hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhH--Hhhccc-----ccc
Confidence 99876543 34679999999999775 4688889999999999999999999987653211 111111 110
Q ss_pred hhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..-+-.+++...-+||..+++..-++|-++++-+.
T Consensus 784 ---Pp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 784 ---PPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred ---CCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 11122356666778899999999899998876543
No 383
>KOG0603|consensus
Probab=100.00 E-value=2.2e-33 Score=283.50 Aligned_cols=234 Identities=24% Similarity=0.281 Sum_probs=187.9
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFC 248 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 248 (455)
-|++...+|.|+||.|-.+.+. +++..+||++.+... + -.+|+.++... .||||+++.+.+
T Consensus 323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~-----------~~~e~~~~~~~~~h~niv~~~~v~ 385 (612)
T KOG0603|consen 323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------D-----------NQDEIPISLLVRDHPNIVKSHDVY 385 (612)
T ss_pred hhccccccCCCCccceeeeeccccccchhheecccccc------c-----------cccccchhhhhcCCCcceeeccee
Confidence 3666778999999999999876 378899999975522 1 22567666666 799999999988
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEE-CCCCceEEcc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGD 326 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl-~~~~~~kl~D 326 (455)
.+ .+.++|||.+.|+-|.+++.... .....+..|+.+|+.|+.|||+ +|+|||||||+|||+ +..++++|+|
T Consensus 386 ~~~~~~~~v~e~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~--~gvvhRDLkp~NIL~~~~~g~lrlty 459 (612)
T KOG0603|consen 386 EDGKEIYLVMELLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHE--QGVVHRDLKPGNILLDGSAGHLRLTY 459 (612)
T ss_pred cCCceeeeeehhccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHh--cCeeecCCChhheeecCCCCcEEEEE
Confidence 88 78899999999999999887632 2337788899999999999999 899999999999999 6999999999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchh-hHHHHHHhcccch
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~ 404 (455)
||.++...... .+.+-|..|.|||++.. +++.++||||||++||+||+|+.||...... .....+ ...+
T Consensus 460 FG~a~~~~~~~------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i--~~~~- 530 (612)
T KOG0603|consen 460 FGFWSELERSC------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI--QMPK- 530 (612)
T ss_pred echhhhCchhh------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh--cCCc-
Confidence 99988765541 13356888999997754 6899999999999999999999999876533 111111 1111
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....++...++||.+||+.||.+||+|.++..
T Consensus 531 -----------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 531 -----------FSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -----------cccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 11456777999999999999999999999853
No 384
>KOG0587|consensus
Probab=100.00 E-value=4.3e-33 Score=288.59 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=201.6
Q ss_pred CCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGF 247 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 247 (455)
+.+++...||.|.+|.||+++.+ +++.+|||++...... .+....|..+|+.. .|||++.++|+
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~--------------deEiE~eynil~~~~~hpnv~~fyg~ 84 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE--------------EEEIELEYNMLKKYSHHPNVATFYGA 84 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc--------------cHHHHHHHHHHHhccCCCCcceEEEE
Confidence 34467799999999999999865 4889999998654331 12255688888876 69999999996
Q ss_pred c------cCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 248 C------NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 248 ~------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
+ .+++.+||||||.|||..|++.... +..+.|..+..|+..+++|+++||. ..++|||||-.|||++.++.
T Consensus 85 ~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~--nkviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 85 FIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN--NKVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh--cceeeecccCceEEEeccCc
Confidence 5 3378899999999999999998766 6789999999999999999999999 77999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccccCC------CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHH
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ------ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~ 395 (455)
+|++|||++....... ....+..||+.|||||++... ++..+|+||||++..||.-|.+|+.+........
T Consensus 162 VKLvDFGvSaQldsT~---grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF 238 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTV---GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF 238 (953)
T ss_pred EEEeeeeeeeeeeccc---ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc
Confidence 9999999987554322 334567999999999988432 5668999999999999999999998877554333
Q ss_pred HHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.. .+.+.+ ..+..+.+.+.++|..|+.+|..+||++.++++
T Consensus 239 ~IpR--NPPPkL-------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 239 LIPR--NPPPKL-------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred cCCC--CCCccc-------cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 3322 222222 224567788999999999999999999998875
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=9.3e-32 Score=252.45 Aligned_cols=236 Identities=30% Similarity=0.454 Sum_probs=186.9
Q ss_pred CCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeEEEEe
Q psy520 182 QFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCIVYEY 259 (455)
Q Consensus 182 ~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~lV~e~ 259 (455)
+||.||+|.+.. ++.||+|++........ ...+.+|++.+++++|+|++++++++.. ...++++||
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------------~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 68 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK------------RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEY 68 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH------------HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeC
Confidence 689999999874 89999999865432110 3458899999999999999999998877 788999999
Q ss_pred ccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCcc
Q psy520 260 MCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK 339 (455)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 339 (455)
+.+++|.+++.... .+++.++..++.+++.++.|||+ .+++|+||+|.||+++.++.++|+|||.+.......
T Consensus 69 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-- 141 (244)
T smart00220 69 CDGGDLFDLLKKRG---RLSEDEARFYARQILSALEYLHS--NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-- 141 (244)
T ss_pred CCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH--cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--
Confidence 99999999987633 38999999999999999999999 789999999999999999999999999988765432
Q ss_pred cceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCc-hhhHHHHHHhcccchhhhcchhhcCCCh
Q psy520 340 TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNN-TILYYYLVVEQEVPVREVLDKEAGEWNE 417 (455)
Q Consensus 340 ~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 417 (455)
......++..|+|||.+. +..+.++|+||||++++++++|..||.... ................. ..
T Consensus 142 --~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~ 210 (244)
T smart00220 142 --LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP---------PE 210 (244)
T ss_pred --ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc---------cc
Confidence 123456888999999664 567889999999999999999999997732 22211111111100000 00
Q ss_pred hHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 418 THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 418 ~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..++..+.+++.+|+..+|++||++.++++
T Consensus 211 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 211 WKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 004456888999999999999999999986
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=7.6e-32 Score=278.58 Aligned_cols=273 Identities=18% Similarity=0.129 Sum_probs=176.5
Q ss_pred CCcCCCcccccCCEEEEEEEE-----------------cCCcEEEEEEeecccCcCCCCcch-hHhhhhhHHHHHHHHHH
Q psy520 171 YPRRGNKLGEGQFGTVYYGKL-----------------KNGMEIAVKTLENNANYSSSNSDN-TEAAMIPILLFENEVQT 232 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~-----------------~~~~~vAvK~~~~~~~~~~~~~~~-~~~~~~~~~~~~~E~~~ 232 (455)
.|++.++||+|+||+||+|.+ ..++.||||+++............ ........+.+..|+..
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~ 225 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM 225 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence 345569999999999999964 125689999986432210000000 00000012235567888
Q ss_pred HHcCCCcce-----eccccccc---------CcceeEEEEeccCCCHHHHHhhcCC---------------------CCC
Q psy520 233 LSQCKHVNL-----LRLLGFCN---------NIMNCIVYEYMCNGSLYDRLARVNN---------------------TPP 277 (455)
Q Consensus 233 l~~l~h~ni-----v~l~~~~~---------~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~ 277 (455)
+.+++|.++ ++++++|. ++..+|||||+++++|.++++.... ...
T Consensus 226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~ 305 (507)
T PLN03224 226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK 305 (507)
T ss_pred HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence 888876654 66777653 2467999999999999999875321 123
Q ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCccc
Q psy520 278 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEA 357 (455)
Q Consensus 278 l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 357 (455)
+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||.
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~--~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~--~~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHR--IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN--FNPLYGMLDPRYSPPEE 381 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc--cCccccCCCcceeChhh
Confidence 4677889999999999999999 8899999999999999999999999999875433211 11122345889999996
Q ss_pred ccCC-----------------------CCChhhHHHHHHHHHHHHcCCC-CCCCCchhhHHHHHHhccc-chhhhcchhh
Q psy520 358 MHCQ-----------------------ISTKTDVFSYGVILLELLTGMK-PIDDNNTILYYYLVVEQEV-PVREVLDKEA 412 (455)
Q Consensus 358 ~~~~-----------------------~s~~sDi~SlGvvl~elltG~~-p~~~~~~~~~~~~~~~~~~-~~~~~~d~~~ 412 (455)
+... ...+.|+||+||++|+|++|.. ||................. ..........
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~ 461 (507)
T PLN03224 382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKY 461 (507)
T ss_pred hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCC
Confidence 6321 1124799999999999999875 7754321111110000000 0000000000
Q ss_pred cCCChhHHHHHHHHHHHHhcccCc---CCCCCHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEK---DKRASMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp---~~RPs~~evl~ 447 (455)
.....+..+....+|+.+++..+| .+|+|++|+++
T Consensus 462 ~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 462 DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 000122345667888999999864 68999999975
No 387
>KOG0671|consensus
Probab=99.98 E-value=9.7e-33 Score=263.26 Aligned_cols=254 Identities=21% Similarity=0.328 Sum_probs=191.3
Q ss_pred CCCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-C-c----ce
Q psy520 169 KPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-H-V----NL 241 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----ni 241 (455)
.+.|.+...+|+|+||.|-.+.+.. +..||||+++.-.. ..++..-|+++|.++. + | -+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k--------------YreAa~iEi~vLqki~~~DP~g~~rc 153 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK--------------YREAALIEIEVLQKINESDPNGKFRC 153 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH--------------HhhHHHHHHHHHHHHHhcCCCCceEE
Confidence 4567778999999999999998764 68999999974322 1445678999999993 2 2 36
Q ss_pred ecccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC--
Q psy520 242 LRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-- 318 (455)
Q Consensus 242 v~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~-- 318 (455)
|.+.+|+.- ++.|||+|.+ |-|+.++|...+ -.+++..++..++.|++.+++|||+ .+++|-||||+|||+..
T Consensus 154 v~m~~wFdyrghiCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~--~kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 154 VQMRDWFDYRGHICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHD--LKLTHTDLKPENILFVSSE 229 (415)
T ss_pred EeeehhhhccCceEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHh--cceeecCCChheEEEeccc
Confidence 667677655 8999999999 779999998744 4679999999999999999999999 77999999999999921
Q ss_pred ------------------CCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHH
Q psy520 319 ------------------NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELL 379 (455)
Q Consensus 319 ------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~ell 379 (455)
+..+||+|||.|++.... .+.++.|..|.|||++.| +++.++||||+||||+|+.
T Consensus 230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred eEEEeccCCccceeccCCCcceEEEecCCcceeccC------cceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence 346899999998864432 256788999999997655 8999999999999999999
Q ss_pred cCCCCCCCCchhh---HHHHHHhcccch--------hhhcchhhcCC------------------------ChhHHHHHH
Q psy520 380 TGMKPIDDNNTIL---YYYLVVEQEVPV--------REVLDKEAGEW------------------------NETHVETLI 424 (455)
Q Consensus 380 tG~~p~~~~~~~~---~~~~~~~~~~~~--------~~~~d~~~~~~------------------------~~~~~~~~l 424 (455)
||...|...+... +...+. ++.+. .+++....-.| ..+.....+
T Consensus 304 tG~~LFqtHen~EHLaMMerIl-Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERIL-GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred ccceecccCCcHHHHHHHHHhh-CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 9999998766221 111111 21111 01111000001 112233457
Q ss_pred HHHHHHhcccCcCCCCCHHHHHH
Q psy520 425 SIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 425 ~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+||.+||..||.+|+|+.|++.
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHccCccccccHHHHhc
Confidence 88999999999999999999875
No 388
>KOG0695|consensus
Probab=99.97 E-value=5.4e-32 Score=253.54 Aligned_cols=238 Identities=24% Similarity=0.340 Sum_probs=188.1
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
++.++||+|+|..|-.++++. .+.||+|++++.....+.. +.-...|-.+..+- +||.+|-+..++..
T Consensus 253 ~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~ndded----------idwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 253 DLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDED----------IDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred eeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCccc----------chhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 455999999999999999864 6889999998765433222 22245566666655 79999999998776
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|.||.+||+|.-.+++.. .+++..+..+...|+.||.|||+ +|||+||||.+|||+|..|++||.|+|+
T Consensus 323 esrlffvieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~--rgiiyrdlkldnvlldaeghikltdygm 397 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHE--RGIIYRDLKLDNVLLDAEGHIKLTDYGM 397 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhh--cCeeeeeccccceEEccCCceeecccch
Confidence 78899999999999998888754 49999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCc--------hhhHHHHHHhc
Q psy520 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNN--------TILYYYLVVEQ 400 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~--------~~~~~~~~~~~ 400 (455)
++..-... ..+++++|||.|+|||+++| .+...+|+|++||+++||+.|+.||+-.. ......++.+.
T Consensus 398 cke~l~~g---d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek 474 (593)
T KOG0695|consen 398 CKEGLGPG---DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK 474 (593)
T ss_pred hhcCCCCC---cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh
Confidence 98654332 34678999999999998877 57889999999999999999999997322 22333334434
Q ss_pred ccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC
Q psy520 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
...++..+.-+ ...+++.-+++||+.|.
T Consensus 475 qiriprslsvk------------as~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 475 QIRIPRSLSVK------------ASHVLKGFLNKDPKERL 502 (593)
T ss_pred cccccceeehh------------hHHHHHHhhcCCcHHhc
Confidence 44444433332 33346677888888874
No 389
>KOG0608|consensus
Probab=99.97 E-value=3.7e-32 Score=272.07 Aligned_cols=204 Identities=25% Similarity=0.342 Sum_probs=167.6
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
...+-||-|+||+|.+++..+ ...||.|.+++......+. ......|-.||..-..+-||+||-.+.+
T Consensus 632 vkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQ----------vaHVKAERDILAEADn~WVVrLyySFQDk 701 (1034)
T KOG0608|consen 632 VKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQ----------VAHVKAERDILAEADNEWVVRLYYSFQDK 701 (1034)
T ss_pred EEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhh----------hhhhhhhhhhHhhcCCcceEEEEEEeccC
Confidence 345889999999999997654 6778999998765432211 2336678899999999999999987777
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
+..|+||+|++||++..+|.+ .+.+++..++.++.++..|+.+.|. -|+|||||||+|||||.+|++||.|||||
T Consensus 702 dnLYFVMdYIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHk--mGFIHRDiKPDNILIDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 702 DNLYFVMDYIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGLC 776 (1034)
T ss_pred CceEEEEeccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHh--ccceecccCccceEEccCCceeeeecccc
Confidence 899999999999999999988 4569999999999999999999999 78999999999999999999999999998
Q ss_pred ccccCC---------Cc-------------------c-----------cceeccCCCCCCcCCcccc-cCCCCChhhHHH
Q psy520 331 KMSETS---------NM-------------------K-----------TMYTENLTGTRPYMPPEAM-HCQISTKTDVFS 370 (455)
Q Consensus 331 ~~~~~~---------~~-------------------~-----------~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~S 370 (455)
.-+... .. + ....-..+||+.|+|||++ ..+++...|+||
T Consensus 777 TGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws 856 (1034)
T KOG0608|consen 777 TGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWS 856 (1034)
T ss_pred ccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhH
Confidence 532110 00 0 0001124799999999966 567899999999
Q ss_pred HHHHHHHHHcCCCCCCCCchh
Q psy520 371 YGVILLELLTGMKPIDDNNTI 391 (455)
Q Consensus 371 lGvvl~elltG~~p~~~~~~~ 391 (455)
.|||||||+.|++||......
T Consensus 857 ~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 857 VGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred hhHHHHHHhhCCCCccCCCCC
Confidence 999999999999999877643
No 390
>cd08308 Death_Tube Death domain of Tube. Death domains (DDs) similar to the DD in the protein Tube from Drosophila melanogaster. In Drosophila, interaction between the DDs of Tube and Pelle is an important component of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and also in mediating innate immune response to pathogens. Tube and Pelle transmit the signal from the Toll receptor to the Dorsal/Cactus complex. Some members of this subfamily contain a C-terminal kinase domain, like Pelle, in addition to the DD. Tube has no counterpart in vertebrates. It contains an N-terminal DD and a C-terminal region with five copies of the Tube repeat, an 8-amino acid motif. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (D
Probab=99.97 E-value=3.7e-32 Score=222.42 Aligned_cols=117 Identities=45% Similarity=0.727 Sum_probs=107.5
Q ss_pred CceeeecCHHHHHHhhhhcCCcchHHHHHHHhhcCCCC-CCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCC
Q psy520 10 DIEIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDP-LKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRR 88 (455)
Q Consensus 10 ~~~i~~l~~~~~~~l~~~ld~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~ 88 (455)
+||||+||++++++||++||+++.|+++|+.|++++|+ ++.+||++.|++.||++++| +|+|||++||++|||+|+.
T Consensus 1 ~TeIR~Lp~~~~~~L~~iLD~~d~Wk~L~~~Ip~~~~~~~~~~~Y~~~hv~~ie~~~~~--~grSpte~LL~eWGT~g~~ 78 (125)
T cd08308 1 DTEIRKLPPADLYRLVNILDINDGWKKLMAIIPSDDDDFNNLAKYNAEHFKLIEQAANK--QRRSCSEILLDEWGTSGKV 78 (125)
T ss_pred CcchhcCCHHHHHHHHHHcCccccHHHHHHhcCCcccccccccccCHHHHHHHHHHHHh--cCCChHHHHHHHHhhcCCC
Confidence 59999999999999999999999999999999999886 78899999999999999987 8999999999999999988
Q ss_pred CCcHHHHHHHHHhcchhhhhhhhccccccC--CCCCCCCchh
Q psy520 89 RPRLSDLIMFLKKAELHQAARYVEVDVLKK--PESPGDNTEA 128 (455)
Q Consensus 89 ~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~ 128 (455)
+|||++|+++|.+.+|++||+++.+++++. |..|..++++
T Consensus 79 r~Tv~~L~~LL~k~~L~~Aa~~la~d~l~~~~~~rp~~gp~a 120 (125)
T cd08308 79 RPTLGVLLQLLVKAELFRAADYVAVDILKEEPPARPVVGPAA 120 (125)
T ss_pred CCcHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCccc
Confidence 999999999999999999999999999876 4445444433
No 391
>KOG1027|consensus
Probab=99.97 E-value=1.7e-32 Score=282.98 Aligned_cols=241 Identities=24% Similarity=0.317 Sum_probs=183.5
Q ss_pred CcccccCCEE-EEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccccccC-cc
Q psy520 176 NKLGEGQFGT-VYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~-Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.+|.|+-|+ ||+|... |+.||||++-... .....+|+..|... .|||||++++.-.+ +.
T Consensus 515 eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~----------------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF 577 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE-GREVAVKRLLEEF----------------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQF 577 (903)
T ss_pred HHcccCCCCcEEEEEeeC-CceehHHHHhhHh----------------HHHHHHHHHHHHhccCCCceEEEEeeccCCce
Confidence 6789999887 6999997 7999999984221 22357899999998 59999999998777 78
Q ss_pred eeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC---C--CceEEcc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE---N--FVPKLGD 326 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~---~--~~~kl~D 326 (455)
.||..|.| ..||.+++..... .........+.+..|++.||+|||+ -+||||||||.||||+. + ..++|+|
T Consensus 578 ~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs--l~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 578 LYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS--LKIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh--cccccccCCCceEEEEccCCCcceeEEecc
Confidence 89999998 7899999987411 1111214457789999999999999 77999999999999975 2 5789999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCcccccCC-CCChhhHHHHHHHHHHHHcC-CCCCCCCchhhHHHHHHhcccch
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTG-MKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~s~~sDi~SlGvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||+++........-...+...||-+|+|||.+... -+.++||||+|||+|..++| .+||.+.-... ..+..+...+
T Consensus 655 fglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~L 732 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYTL 732 (903)
T ss_pred cccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccce
Confidence 99999877664333335778999999999987654 56689999999999999995 99998653211 1111121111
Q ss_pred hhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+- +..++ ...+||.+|++++|..||++.+|+.
T Consensus 733 ~~L~-------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 733 VHLE-------PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eeec-------cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1110 11111 6889999999999999999999964
No 392
>KOG0984|consensus
Probab=99.97 E-value=1.4e-31 Score=235.94 Aligned_cols=197 Identities=28% Similarity=0.360 Sum_probs=160.7
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccccc-Ccc
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCN-NIM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-~~~ 252 (455)
..||+|++|.|=+-++. +|+..|+|.++..... + ...+..+|+.+..++ ..|.+|.+||... +..
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~-----q-------~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS-----Q-------EQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcCh-----H-------HHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 77999999999887765 4899999999755431 1 134577899988887 6999999999554 489
Q ss_pred eeEEEEeccCCCHHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLAR-VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.++.||.| .-||..+-.. ...+..+++...-+|+..+..||.|||+. -.+||||+||+|||++.+|++||||||.+-
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEEccCCcEEEcccccce
Confidence 99999999 5677655432 22356799999999999999999999984 469999999999999999999999999988
Q ss_pred cccCCCcccceeccCCCCCCcCCcccccC-----CCCChhhHHHHHHHHHHHHcCCCCCCCCch
Q psy520 332 MSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNT 390 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~s~~sDi~SlGvvl~elltG~~p~~~~~~ 390 (455)
....+-..+ .-.|...|||||.+.. +++.+|||||||+++.||.+++.||+....
T Consensus 198 ~L~dSiAkt----~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 198 YLVDSIAKT----MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred eehhhhHHH----HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 766543222 2367888999997743 467899999999999999999999998764
No 393
>KOG0664|consensus
Probab=99.97 E-value=7e-32 Score=246.71 Aligned_cols=254 Identities=23% Similarity=0.327 Sum_probs=186.2
Q ss_pred CcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC----
Q psy520 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN---- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---- 250 (455)
+.||-|+||.||-+++. +|+.||+|++..-.. .....+.+.+|++.|..++|.|++..++....
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq-----------~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~d 127 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQ-----------NLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPS 127 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHH-----------HHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCch
Confidence 78999999999999985 599999999853211 12235668899999999999999999886543
Q ss_pred --cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+..|.+.|.| ..+|...+-. ..+++...+.-+.+||++||.|||+ .+|.||||||.|+|++.|..+||||||
T Consensus 128 fFqEiYV~TELm-QSDLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLHs--A~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 128 FFQELYVLTELM-QSDLHKIIVS---PQALTPDHVKVFVYQILRGLKYLHT--ANILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred HHHHHHHHHHHH-Hhhhhheecc---CCCCCcchhhhhHHHHHhhhHHHhh--cchhhccCCCccEEeccCceEEecccc
Confidence 2345677777 4566665554 5679999999999999999999999 789999999999999999999999999
Q ss_pred ccccccCCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh--cccch
Q psy520 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVPV 404 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~~ 404 (455)
+++........ .++. -+-|..|.|||++.| .++.++||||.|||+.|++..+..|...+.......+.. +....
T Consensus 202 LARvee~d~~~-hMTq-EVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~ 279 (449)
T KOG0664|consen 202 LARTWDQRDRL-NMTH-EVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ 279 (449)
T ss_pred cccccchhhhh-hhHH-HHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH
Confidence 99987655432 2222 245788999998765 589999999999999999999999987764332222211 11111
Q ss_pred hh-----------hcchhh---------cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 405 RE-----------VLDKEA---------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 405 ~~-----------~~d~~~---------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+. ++.... ....+........+++.+++.+||++|.+.++.+..
T Consensus 280 EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 280 EAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 10 111000 001112233344556778999999999998887643
No 394
>KOG1024|consensus
Probab=99.97 E-value=9.5e-31 Score=249.69 Aligned_cols=254 Identities=25% Similarity=0.340 Sum_probs=204.7
Q ss_pred cCCCcccccCCEEEEEEEEcC------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
+....+-+|+||.||+|.|.+ .+.|-||+++...+ .+....|.+|--.+..+.|||+.++.+
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS------------~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS------------QIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc------------HHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 455889999999999997652 45677888764432 334677899999999999999999999
Q ss_pred cccC--cceeEEEEeccCCCHHHHHhhcC-----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC
Q psy520 247 FCNN--IMNCIVYEYMCNGSLYDRLARVN-----NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 247 ~~~~--~~~~lV~e~~~~gsL~~~l~~~~-----~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
.+.+ ..++.+|.++.-|+|..+|...+ ....++..+...++.|++.|+.|||+ +++||.||-..|.+||+.
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~--~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN--HGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh--cCcccchhhhhcceehhh
Confidence 8765 67888999999999999998332 23457788899999999999999999 899999999999999999
Q ss_pred CceEEccccccccccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHH
Q psy520 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLV 397 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~ 397 (455)
.++||+|=.++|..-...... ....-.....||+||.+ ...++.+||+|||||++|||+| |+.||.+.+...+....
T Consensus 433 LqVkltDsaLSRDLFP~DYhc-LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl 511 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHC-LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL 511 (563)
T ss_pred eeEEeccchhccccCcccccc-cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH
Confidence 999999999998765544221 11222335579999966 5578999999999999999999 99999998877666554
Q ss_pred HhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..+. .--.+.+++..+..++++||...|++||+.+|++.-|.+.
T Consensus 512 kdGy-----------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 512 KDGY-----------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred hccc-----------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 4321 2223456777788899999999999999999999988764
No 395
>KOG0576|consensus
Probab=99.97 E-value=2.2e-31 Score=268.56 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=202.5
Q ss_pred CCCCCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccc
Q psy520 167 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 167 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
+..+.|+...++|.|++|.|||++++. ++..|||+++...... .....+|+-+++.|+||||+.++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd-------------~~~iqqei~~~~dc~h~nivay~ 78 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-------------FSGIQQEIGMLRDCRHPNIVAYF 78 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc-------------ccccccceeeeecCCCcChHHHH
Confidence 556667888999999999999999874 8899999998654311 23356899999999999999999
Q ss_pred ccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEE
Q psy520 246 GFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
|.+.. +..++.||||.||||++.-+- ..++++.++..+++..++|+.|||+ .|-+|||||-+|||+++.|.+|+
T Consensus 79 gsylr~dklwicMEycgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs--~gk~hRdiKGanilltd~gDvkl 153 (829)
T KOG0576|consen 79 GSYLRRDKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHS--QGKIHRDIKGANILLTDEGDVKL 153 (829)
T ss_pred hhhhhhcCcEEEEEecCCCcccceeee---cccchhHHHHHHHhhhhccchhhhc--CCcccccccccceeecccCceee
Confidence 96655 889999999999999997765 6789999999999999999999999 88999999999999999999999
Q ss_pred ccccccccccCCCcccceeccCCCCCCcCCcccc----cCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhc
Q psy520 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 400 (455)
.|||.+-.....- .....+.||+.|||||+- .|.+...+|||++|++..|+---++|..........+..-..
T Consensus 154 aDfgvsaqitati---~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS 230 (829)
T KOG0576|consen 154 ADFGVSAQITATI---AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS 230 (829)
T ss_pred cccCchhhhhhhh---hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc
Confidence 9999865443321 223457999999999954 567899999999999999999999987665433222221111
Q ss_pred ccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+.. .++..+...+.+|++.++..+|++||+++.++.
T Consensus 231 ~~qpp~l-------kDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 231 GFQPPTL-------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCCcc-------cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111111 223456778999999999999999999987653
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=5.2e-29 Score=227.75 Aligned_cols=209 Identities=36% Similarity=0.555 Sum_probs=178.0
Q ss_pred ccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|++|.||++...+ ++.+++|++....... ....+.+|++.++.++|++++++++++.. ...++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~ 68 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYL 68 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEE
Confidence 6999999999999875 8999999997543211 13558899999999999999999998877 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC-CCceEEcccccccccc
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSE 334 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~ 334 (455)
++||+.+++|.+++.... ..+++..+..++.++++++.+||+ .+++|+||+|.||+++. ++.++|+|||.+....
T Consensus 69 ~~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~--~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~ 144 (215)
T cd00180 69 VMEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHS--NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLT 144 (215)
T ss_pred EEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHhhEEEeCCCCcEEEecCCceEEcc
Confidence 999999999999988642 368999999999999999999999 89999999999999999 8999999999988665
Q ss_pred CCCcccceeccCCCCCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhh
Q psy520 335 TSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... ......+...|++||.+.. ..+.++|+||+|+++++|
T Consensus 145 ~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------- 187 (215)
T cd00180 145 SDKS---LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------- 187 (215)
T ss_pred CCcc---hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence 4321 1233567888999997755 567899999999999999
Q ss_pred cCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
..+.+++..|+..+|.+||++.++++.
T Consensus 188 ---------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 236778999999999999999999864
No 397
>KOG1152|consensus
Probab=99.97 E-value=8.4e-31 Score=260.46 Aligned_cols=201 Identities=25% Similarity=0.391 Sum_probs=169.1
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC---Ccceeccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK---HVNLLRLLGF 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~ 247 (455)
|...+.||+|+||.|+++.++. ...|+||.+.+.....+....+.. .-..-.|++||+.++ |+||+++++|
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrk-----LGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRK-----LGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccc-----cCccchhHHHHHHhhhcCccchhhhhhe
Confidence 3456899999999999999875 678999999887655443333221 222457999999997 9999999999
Q ss_pred ccC-cceeEEEEecc-CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEc
Q psy520 248 CNN-IMNCIVYEYMC-NGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~-~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
+++ +.++|++|-.. |.+|++++.. ++.+++..+..|+.|++.|+++||+ .||||||||-+||.++.+|.+||+
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~---kp~m~E~eAk~IFkQV~agi~hlh~--~~ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEF---KPRMDEPEAKLIFKQVVAGIKHLHD--QGIVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhc---cCccchHHHHHHHHHHHhccccccc--cCceecccccccEEEecCCeEEEe
Confidence 998 78889999764 4488999887 5679999999999999999999999 899999999999999999999999
Q ss_pred cccccccccCCCcccceeccCCCCCCcCCcccccCC--CCChhhHHHHHHHHHHHHcCCCCCCC
Q psy520 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDD 387 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~s~~sDi~SlGvvl~elltG~~p~~~ 387 (455)
|||.+....... ...++||..|.|||++.|. ....-|||++|++||.++....||.+
T Consensus 713 dfgsaa~~ksgp-----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 713 DFGSAAYTKSGP-----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eccchhhhcCCC-----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999987665443 3457999999999999875 36689999999999999999988864
No 398
>KOG0670|consensus
Probab=99.96 E-value=8.5e-30 Score=250.50 Aligned_cols=254 Identities=22% Similarity=0.328 Sum_probs=193.7
Q ss_pred CcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCC------cceecc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH------VNLLRL 244 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l 244 (455)
|++....|+|-||+|.+|.+.. |..||||++...... -+.=+.|++||++|.. -|++++
T Consensus 434 Y~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M--------------~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 434 YEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM--------------HKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred eEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH--------------hhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 4566778999999999999875 789999999753220 1223579999999942 388999
Q ss_pred cccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC-CCce
Q psy520 245 LGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVP 322 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~-~~~~ 322 (455)
+..+.- ++.|||+|-+ ..+|.+.|.+.+..-.|....+..++.|+.-||..|-. .||+|.||||+|||+++ ...+
T Consensus 500 ~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~--c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK--CGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred HHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh--cCeeecccCccceEeccCccee
Confidence 885544 9999999988 78999999999888889999999999999999999999 88999999999999986 4689
Q ss_pred EEccccccccccCCCcccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchh--hHHHHHHh
Q psy520 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI--LYYYLVVE 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~--~~~~~~~~ 399 (455)
||||||.|.+.......+. .-+.-|.|||++.| .++...|+||.||+||||.||+..|.+.... +..+....
T Consensus 577 KLCDfGSA~~~~eneitPY-----LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K 651 (752)
T KOG0670|consen 577 KLCDFGSASFASENEITPY-----LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK 651 (752)
T ss_pred eeccCccccccccccccHH-----HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence 9999999988776653332 23456999996655 6899999999999999999999999876532 22222111
Q ss_pred cccc---------hhhhcch--------------------------------hh-c--CCC--hhHHHHHHHHHHHHhcc
Q psy520 400 QEVP---------VREVLDK--------------------------------EA-G--EWN--ETHVETLISIVFEKCCV 433 (455)
Q Consensus 400 ~~~~---------~~~~~d~--------------------------------~~-~--~~~--~~~~~~~l~~Li~~~l~ 433 (455)
+..+ ..+.+|. .+ + ..+ .......+.+|+.+|+.
T Consensus 652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~ 731 (752)
T KOG0670|consen 652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI 731 (752)
T ss_pred CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence 1111 0111111 00 0 011 12445568899999999
Q ss_pred cCcCCCCCHHHHHH
Q psy520 434 FEKDKRASMRDIVD 447 (455)
Q Consensus 434 ~dp~~RPs~~evl~ 447 (455)
.||.+|.+..+.+.
T Consensus 732 LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 732 LDPEKRITVNQALK 745 (752)
T ss_pred cChhhcCCHHHHhc
Confidence 99999999998764
No 399
>KOG0668|consensus
Probab=99.96 E-value=3e-29 Score=224.33 Aligned_cols=258 Identities=19% Similarity=0.301 Sum_probs=193.4
Q ss_pred hhcCCCCCCCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Cc
Q psy520 162 ATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HV 239 (455)
Q Consensus 162 ~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ 239 (455)
.+-.|....-|++.+++|+|-++.||.|..- ++..++||+++.-. .+...+|+.||..++ ||
T Consensus 30 ~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----------------kkKIkREikIL~nL~gg~ 93 (338)
T KOG0668|consen 30 LVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK----------------KKKIKREIKILQNLRGGP 93 (338)
T ss_pred eeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH----------------HHHHHHHHHHHHhccCCC
Confidence 4556666677888899999999999999843 47899999997432 445889999999997 99
Q ss_pred ceecccccccC---cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEE
Q psy520 240 NLLRLLGFCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL 316 (455)
Q Consensus 240 niv~l~~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl 316 (455)
||+++++...+ ..+.|++||..+.+...... .++...+..++.+++.||.|||+ .||.|||+||.|+++
T Consensus 94 NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS--~GImHRDVKPhNvmI 165 (338)
T KOG0668|consen 94 NIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHS--MGIMHRDVKPHNVMI 165 (338)
T ss_pred CeeehhhhhcCccccCchhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHh--cCcccccCCcceeee
Confidence 99999998766 56789999998887766544 47888899999999999999999 899999999999999
Q ss_pred CC-CCceEEccccccccccCCCcccceeccCCCCCCcCCccccc--CCCCChhhHHHHHHHHHHHHcCCCCCCCCch---
Q psy520 317 DE-NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNT--- 390 (455)
Q Consensus 317 ~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~s~~sDi~SlGvvl~elltG~~p~~~~~~--- 390 (455)
|. .-.++|+|+|+|.+....... +..+.+..|--||++- ..++.+.|+|||||++..|+..+-||.....
T Consensus 166 dh~~rkLrlIDWGLAEFYHp~~eY----nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D 241 (338)
T KOG0668|consen 166 DHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 241 (338)
T ss_pred chhhceeeeeecchHhhcCCCcee----eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH
Confidence 95 568999999999987665422 2345667788999763 3578899999999999999999999864431
Q ss_pred hhHHHHHHhcccc---------------hhhhcchhh-cCC-------ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 391 ILYYYLVVEQEVP---------------VREVLDKEA-GEW-------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 391 ~~~~~~~~~~~~~---------------~~~~~d~~~-~~~-------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.......+... +.+++.... ..| ....+....-+|+.+.+..|-..|+|++|...
T Consensus 242 QLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 242 QLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 1111111111111 111111111 011 11233456778999999999999999998754
No 400
>cd08793 Death_IRAK4 Death domain of Interleukin-1 Receptor-Associated Kinase 4. Death Domain (DD) of Interleukin-1 Receptor-Associated Kinase 4 (IRAK4). IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. They are involved in signal transduction pathways involving IL-1 and IL-18 receptors, Toll-like receptors, nuclear factor-kappaB, and mitogen-activated protein kinases. IRAKs contain an N-terminal DD domain and a C-terminal kinase domain. IRAK4 is an active kinase that is also involved in T-cell receptor signaling pathways, implying that it may function in acquired immunity and not just in innate immunity. It is known as the master IRAK member because its absence strongly impairs TLR- and IL-1-mediated signaling and innate immune defenses, while the absence of other IRAK proteins only shows slight effects. IRAK4-deficient patients have impaired inflammatory responses and recurrent life-threatening infections. DDs are protein-protein int
Probab=99.96 E-value=3.3e-29 Score=196.62 Aligned_cols=98 Identities=23% Similarity=0.359 Sum_probs=93.3
Q ss_pred ceeeecCHHHHHHhhhhcCCcchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCC
Q psy520 11 IEIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRP 90 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~ 90 (455)
||||.||++++++||++|||+++|+++|..|++++| +++|++.|||.||++++ +|+|||++||++||++ |+
T Consensus 1 t~ir~L~~~vrkkL~~~LDp~~~W~~LA~~i~~~~~---~~~y~~~ei~~ie~~~~---~g~SPT~~LL~dWgt~---N~ 71 (100)
T cd08793 1 TYVRNLNYGLLRQLSDFLDPQEGWKKIAVAIKKPSG---DPRYSQFHIRRFEALVQ---QGKSPTCELLFDWGTT---NC 71 (100)
T ss_pred ChHHHcCHHHHHHHHHHhCCcccHHHHHHHHhcccC---CCCCCHHHHHHHHHHHH---cCCChHHHHHHHHccC---CC
Confidence 799999999999999999999999999999999988 89999999999999988 5999999999999996 99
Q ss_pred cHHHHHHHHHhcchhhhhhhhcccccc
Q psy520 91 RLSDLIMFLKKAELHQAARYVEVDVLK 117 (455)
Q Consensus 91 ~~~~l~~~l~~~~l~~~~~~~~~~~~~ 117 (455)
||++|+++|.+.++++||+++.|++.+
T Consensus 72 TV~~L~~lL~k~~l~~am~~l~p~~~~ 98 (100)
T cd08793 72 TVGDLVDLLIQNEFFAPASLLLPDAVP 98 (100)
T ss_pred cHHHHHHHHHHcccHHHHHHHCCCccc
Confidence 999999999999999999999887643
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1.4e-27 Score=222.17 Aligned_cols=197 Identities=35% Similarity=0.529 Sum_probs=165.9
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
.+.+.||+|++|.||+|...+ ++.+|+|.+...... .....+.+|++.+.+++|+|++++++++..
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------------~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~ 69 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE------------KQREEFLREIRILKKLKHPNIVKLYGVFEDP 69 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch------------HHHHHHHHHHHHHHhCCCCChhhheeeeecC
Confidence 455889999999999999875 789999999754321 014568899999999999999999998776
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++++||+.+++|.+++..... .+++..+..++.+++.++.+||+ .+++|+||+|.||+++.++.++|+|||.+
T Consensus 70 ~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~di~~~ni~v~~~~~~~l~d~g~~ 145 (225)
T smart00221 70 EPLYLVMEYCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHS--LGIVHRDLKPENILLGMDGLVKLADFGLA 145 (225)
T ss_pred CceEEEEeccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeeCcee
Confidence 788999999999999999987332 28999999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccc-c-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-H-CQISTKTDVFSYGVILLELLTGMKPIDD 387 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~-~~~s~~sDi~SlGvvl~elltG~~p~~~ 387 (455)
........ .......++..|++||.+ . ...+.++|+||||+++++|++|+.||..
T Consensus 146 ~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 146 RFIHRDLA--ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eEecCccc--ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 87654320 012345678889999976 3 3467799999999999999999999976
No 402
>KOG0665|consensus
Probab=99.96 E-value=8.5e-29 Score=231.40 Aligned_cols=254 Identities=22% Similarity=0.283 Sum_probs=187.2
Q ss_pred CCCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+|.-...+|.|.- .|--+.+. .+++||+|++........ ..++..+|...+..+.|+||++++.++
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~-----------~akra~rel~l~~~v~~~nii~l~n~f 84 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQT-----------HAKRAYRELKLMKCVNHKNIISLLNVF 84 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCc-----------cchhhhhhhhhhhhhcccceeeeeecc
Confidence 34444477888888 55555543 379999999865422111 134467999999999999999999966
Q ss_pred cC-------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 249 NN-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 249 ~~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
.- ...++||||| .++|...+.- .++-.....|..|++.|++|||+ .||+||||||+||++..++.
T Consensus 85 tP~~~l~~~~e~y~v~e~m-~~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs--~~IihRdLkPsnivv~~~~~ 156 (369)
T KOG0665|consen 85 TPQKTLEEFQEVYLVMELM-DANLCQVILM-----ELDHETISYILYQMLCGIKHLHS--AGIIHRDLKPSNIVVNSDCT 156 (369)
T ss_pred CccccHHHHHhHHHHHHhh-hhHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHh--cceeecccCcccceecchhh
Confidence 32 4568999999 6888888773 36777889999999999999999 78999999999999999999
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHh-
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE- 399 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~- 399 (455)
+||.|||+++..... ..-+..+.|.-|.|||++. -++.+.+||||+||++.||++|..-|.+.+....+..+..
T Consensus 157 lKi~dfg~ar~e~~~----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~ 232 (369)
T KOG0665|consen 157 LKILDFGLARTEDTD----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ 232 (369)
T ss_pred eeeccchhhcccCcc----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence 999999999864433 2234567899999999664 3688999999999999999999999987664433333322
Q ss_pred cccchhhhcc----------------------hhh--cCCC-----hhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 400 QEVPVREVLD----------------------KEA--GEWN-----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 ~~~~~~~~~d----------------------~~~--~~~~-----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
-+.+-+.+.+ ... ..|+ +..-....++++.+||..+|++|.++++++.
T Consensus 233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 1111000000 000 0010 1133456889999999999999999999875
No 403
>KOG1290|consensus
Probab=99.95 E-value=1.5e-27 Score=233.60 Aligned_cols=130 Identities=28% Similarity=0.321 Sum_probs=108.9
Q ss_pred CCCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-----C---cc
Q psy520 170 PYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-----H---VN 240 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~n 240 (455)
.+|.+.++||-|-|++||++-+.. .+.||+|+.+... ...+....||++|++++ | ..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--------------hYtEaAlDEIklL~~v~~~Dp~~~~~~~ 143 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--------------HYTEAALDEIKLLQQVREGDPNDPGKKC 143 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh--------------HHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence 357788999999999999998764 6789999997322 12455778999999883 2 37
Q ss_pred eeccccccc----C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEE
Q psy520 241 LLRLLGFCN----N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 315 (455)
Q Consensus 241 iv~l~~~~~----~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NIL 315 (455)
||+|++++. + .+.|+|+|++ |.+|..++..... ..++...+..|+.|++.||.|||+- .||||-||||+|||
T Consensus 144 VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~e-cgIIHTDlKPENvL 220 (590)
T KOG1290|consen 144 VVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHRE-CGIIHTDLKPENVL 220 (590)
T ss_pred eeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHh-cCccccCCCcceee
Confidence 999999763 2 6889999999 8999999987664 5689999999999999999999984 68999999999999
Q ss_pred E
Q psy520 316 L 316 (455)
Q Consensus 316 l 316 (455)
+
T Consensus 221 l 221 (590)
T KOG1290|consen 221 L 221 (590)
T ss_pred e
Confidence 9
No 404
>KOG1167|consensus
Probab=99.95 E-value=4e-28 Score=234.64 Aligned_cols=253 Identities=25% Similarity=0.306 Sum_probs=186.6
Q ss_pred CcCCCcccccCCEEEEEEEEcC----CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
|+..++||+|+|++||++++.+ .+.||+|.+..... .....+|++.|..+ .+.||+++.+
T Consensus 38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~---------------p~ri~~El~~L~~~gG~~ni~~~~~ 102 (418)
T KOG1167|consen 38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS---------------PSRILNELEMLYRLGGSDNIIKLNG 102 (418)
T ss_pred hhhhccccccchhhhhhhhHhhhccccceEeeeecccccC---------------chHHHHHHHHHHHhccchhhhcchh
Confidence 4556999999999999998643 57899999965433 33478999999999 5999999999
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC-CCCceEE
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKL 324 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~-~~~~~kl 324 (455)
+... +..++|+||++..+-.++... ++...+..++..++.||.++|. +|||||||||+|+|.+ ..+.-.|
T Consensus 103 ~~rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~--~GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 103 CFRNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHK--NGIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred hhccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhc--cCccccCCCccccccccccCCceE
Confidence 8776 899999999999999888775 7788999999999999999999 8999999999999998 4577889
Q ss_pred ccccccccccCCC-------------------------------c----------ccceeccCCCCCCcCCccccc--CC
Q psy520 325 GDFGIVKMSETSN-------------------------------M----------KTMYTENLTGTRPYMPPEAMH--CQ 361 (455)
Q Consensus 325 ~DFGla~~~~~~~-------------------------------~----------~~~~~~~~~gt~~Y~aPE~~~--~~ 361 (455)
+|||+|....... . .........||++|.|||++. +.
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~ 254 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR 254 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccC
Confidence 9999986110000 0 000011246999999999764 35
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCCCchh---hHHHH-----------HHhccc-------c---hhh------hcc-h
Q psy520 362 ISTKTDVFSYGVILLELLTGMKPIDDNNTI---LYYYL-----------VVEQEV-------P---VRE------VLD-K 410 (455)
Q Consensus 362 ~s~~sDi~SlGvvl~elltG~~p~~~~~~~---~~~~~-----------~~~~~~-------~---~~~------~~d-~ 410 (455)
.++++||||.|||++-+++++.||...... +.... ...... . +.+ .++ .
T Consensus 255 QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~ 334 (418)
T KOG1167|consen 255 QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIE 334 (418)
T ss_pred cCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChh
Confidence 689999999999999999999999654311 11111 000000 0 000 000 0
Q ss_pred hhc---------CCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 411 EAG---------EWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 411 ~~~---------~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... ....+..+..+.+|+.+|+..||.+|.++++.++
T Consensus 335 ~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 335 SIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred hcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000 0112334557889999999999999999998874
No 405
>KOG1345|consensus
Probab=99.95 E-value=9.8e-28 Score=219.54 Aligned_cols=242 Identities=19% Similarity=0.319 Sum_probs=176.9
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccc-cc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGF-CN 249 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~ 249 (455)
.+.+.||+|.||.+-+++++. .+.+|+|.+..... ....|.+|...--.+ .|.||+..|+. +.
T Consensus 27 ~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t--------------t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFq 92 (378)
T KOG1345|consen 27 TINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT--------------TQADFVREFHYSFFLSPHQHIIDTYEVAFQ 92 (378)
T ss_pred hHHHHhcccceeeEEeeeccCCceEEEeeccCcchh--------------hHHHHHHHhccceeeccchhhhHHHHHHhh
Confidence 344899999999999999885 78899999864321 256699999877666 58999999984 34
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC--CCCceEEcc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD--ENFVPKLGD 326 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~--~~~~~kl~D 326 (455)
. +.+.+++||++.|+|..-+.. ..+.+....+++.|++.||.|+|+ +++||||||.+||||- +...+||||
T Consensus 93 t~d~YvF~qE~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHs--knlVHRdlK~eNiLif~~df~rvKlcD 166 (378)
T KOG1345|consen 93 TSDAYVFVQEFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHS--KNLVHRDLKAENILIFDADFYRVKLCD 166 (378)
T ss_pred cCceEEEeeccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhc--cchhhcccccceEEEecCCccEEEeee
Confidence 4 777889999999999887765 347888899999999999999999 8999999999999994 345899999
Q ss_pred ccccccccCCCcccceeccCCCCCCcCCccccc----CC--CCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHH----H
Q psy520 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH----CQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY----L 396 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~--~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~----~ 396 (455)
||+.+..+.. .....-+..|.|||+.. +. ..+.+|+|.||+++|.++||.+||.........+ .
T Consensus 167 FG~t~k~g~t------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~ 240 (378)
T KOG1345|consen 167 FGLTRKVGTT------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ 240 (378)
T ss_pred cccccccCce------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH
Confidence 9998754322 12234466799999542 22 4678999999999999999999998543221111 1
Q ss_pred HHh-cccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q psy520 397 VVE-QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 397 ~~~-~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
... ....+++.+ .. .+.-+..+..+-+..++++|-.+.++.+.-
T Consensus 241 w~~rk~~~~P~~F----~~-----fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 241 WLKRKNPALPKKF----NP-----FSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred HhcccCccCchhh----cc-----cCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 111 111112111 11 122244456788999999997776665543
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=6.3e-27 Score=258.19 Aligned_cols=197 Identities=17% Similarity=0.170 Sum_probs=135.5
Q ss_pred HHcCCC-cceecccccc-------cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q psy520 233 LSQCKH-VNLLRLLGFC-------NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP 303 (455)
Q Consensus 233 l~~l~h-~niv~l~~~~-------~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~ 303 (455)
+++++| +||+.+++++ .. ...++++||+ +++|.++|... ..++++.+++.++.||+.||.|||+ +|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~--~g 100 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHS--QG 100 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHh--CC
Confidence 345566 6888888866 12 3445678887 77999999753 2469999999999999999999999 89
Q ss_pred eEecCCCCCcEEECC-------------------CCceEEccccccccccCCCcc-------------cceeccCCCCCC
Q psy520 304 IIHRDVKSANVLLDE-------------------NFVPKLGDFGIVKMSETSNMK-------------TMYTENLTGTRP 351 (455)
Q Consensus 304 iiH~Dikp~NILl~~-------------------~~~~kl~DFGla~~~~~~~~~-------------~~~~~~~~gt~~ 351 (455)
|+||||||+||||+. ++.+||+|||+++........ ........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 445566666666532110000 000112468999
Q ss_pred cCCccccc-CCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHH
Q psy520 352 YMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEK 430 (455)
Q Consensus 352 Y~aPE~~~-~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~ 430 (455)
|||||++. ..++.++|||||||+||||++|.+|+............ . .+.+.. ....+ ...+++.+
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~--~------~~~~~~----~~~~~-~~~~~~~~ 247 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH--R------VLPPQI----LLNWP-KEASFCLW 247 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH--h------hcChhh----hhcCH-HHHHHHHH
Confidence 99999764 46899999999999999999999887643221111100 0 000000 00111 23466788
Q ss_pred hcccCcCCCCCHHHHHH
Q psy520 431 CCVFEKDKRASMRDIVD 447 (455)
Q Consensus 431 ~l~~dp~~RPs~~evl~ 447 (455)
||..+|.+||++.|+++
T Consensus 248 ~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQ 264 (793)
T ss_pred hCCCChhhCcChHHHhh
Confidence 99999999999999975
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=1.1e-25 Score=202.64 Aligned_cols=167 Identities=22% Similarity=0.282 Sum_probs=124.4
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCcccce
Q psy520 263 GSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 342 (455)
Q Consensus 263 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 342 (455)
|||.+++...+ .++++.+++.|+.|++.||+|||+ ++ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~--~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHR--QA------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHh--cC------CcccEeEcCccceee--ccceEeeccc------
Confidence 78999998643 469999999999999999999999 55 999999999999999 9998765432
Q ss_pred eccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHH
Q psy520 343 TENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVE 421 (455)
Q Consensus 343 ~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 421 (455)
...||+.|+|||++.+ .++.++|||||||++|||+||..||.................. . .++. .......+.
T Consensus 63 --~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~~~ 136 (176)
T smart00750 63 --QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP--A-DDPR-DRSNLESVS 136 (176)
T ss_pred --cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc--c-CCcc-ccccHHHHH
Confidence 1268999999997644 6788999999999999999999999765422111111100000 0 0000 001122333
Q ss_pred H--HHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 422 T--LISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 422 ~--~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
. .+.+++.+|+..+|.+||++.++++.+..+.
T Consensus 137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 137 AARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3 5889999999999999999999999876553
No 408
>cd08307 Death_Pelle Death domain of the protein kinase Pelle. Death domain (DD) of the protein kinase Pelle from Drosophila melanogaster and simlar proteins. In Drosophila, interaction between the DDs of Tube and Pelle is an important component of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and in mediating innate immune responses to pathogens. Tube and Pelle transmit the signal from the Toll receptor to the Dorsal/Cactus complex. Pelle also functions in photoreceptor axon targeting. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=99.92 E-value=1.3e-25 Score=177.88 Aligned_cols=90 Identities=22% Similarity=0.414 Sum_probs=84.7
Q ss_pred ceeeecCHHHHHHhhhhcCCcchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCC
Q psy520 11 IEIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRP 90 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~ 90 (455)
||||+||++++++||++||++++|+++|+.|+ +|++.+|+.||+++. +|+|||++||++||++ |+
T Consensus 1 ~yIr~Lp~~~~~~Lc~lLD~~~~W~~LA~~i~---------~ys~~~v~~i~~~~~---~g~SPt~eLL~~WG~~---n~ 65 (97)
T cd08307 1 MYIYDIPFTERKQLCALLDTDNVWEELAFVMM---------GYSNDDVEGIQRCCL---RGRSPTEELLDIWGNK---NH 65 (97)
T ss_pred CCcccCCHHHHHHHHHHhCCcCcHHHHHHHHh---------cCCHHHHHHHHHHHc---CCCChHHHHHHHHhhc---CC
Confidence 69999999999999999999999999999997 899999999999987 5999999999999998 99
Q ss_pred cHHHHHHHHHhcchhhhhhhhcccc
Q psy520 91 RLSDLIMFLKKAELHQAARYVEVDV 115 (455)
Q Consensus 91 ~~~~l~~~l~~~~l~~~~~~~~~~~ 115 (455)
||++|+++|.+.++++|++++.+-+
T Consensus 66 Tv~~L~~~L~k~kl~~Am~ilk~~v 90 (97)
T cd08307 66 TITELFVLLYREKLFRAMRIIKDLV 90 (97)
T ss_pred CHHHHHHHHHHhchHHHHHHHHHhc
Confidence 9999999999999999999875433
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=4e-25 Score=219.72 Aligned_cols=166 Identities=19% Similarity=0.155 Sum_probs=124.6
Q ss_pred CcCCCcccccCCEEEEEEEEc--CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceec-ccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLK--NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLR-LLGFC 248 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~ 248 (455)
|.+++.||+|+||+||+|.++ +++.||||++........ . . .....|.+|+++|++++|+|+++ ++.+
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~-~-~------~~~~~~~~E~~iL~~L~h~~iv~~l~~~- 90 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWS-K-P------LARHLAAREIRALKTVRGIGVVPQLLAT- 90 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccc-c-H------HHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence 455699999999999999875 467789998753211000 0 0 11455899999999999999986 4432
Q ss_pred cCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCC-CCCcEEECCCCceEEccc
Q psy520 249 NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV-KSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Di-kp~NILl~~~~~~kl~DF 327 (455)
+..++||||++|++|.. +.. .. ...++.+++.||.|||+ +||+|||| ||+|||++.++.+||+||
T Consensus 91 --~~~~LVmE~~~G~~L~~-~~~------~~---~~~~~~~i~~aL~~lH~--~gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHL-ARP------HG---DPAWFRSAHRALRDLHR--AGITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred --CCcEEEEEccCCCCHHH-hCc------cc---hHHHHHHHHHHHHHHHH--CCCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 45799999999999963 211 11 14678899999999999 89999999 999999999999999999
Q ss_pred cccccccCCCcccc-----eeccCCCCCCcCCcccccC
Q psy520 328 GIVKMSETSNMKTM-----YTENLTGTRPYMPPEAMHC 360 (455)
Q Consensus 328 Gla~~~~~~~~~~~-----~~~~~~gt~~Y~aPE~~~~ 360 (455)
|+++.......... ......+++.|+|||.+..
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99987654321111 1135678999999998854
No 410
>KOG1165|consensus
Probab=99.92 E-value=3.3e-24 Score=201.50 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=189.7
Q ss_pred CCCCcCCCcccccCCEEEEEEEE-cCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceecccc
Q psy520 169 KPYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLG 246 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~ 246 (455)
.+.|+++++||+|+||..+.|+. -++.+||||.-..++. .-++..|....+.|. .++|..+|-
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~---------------APQLrdEYr~YKlL~g~~GIP~vYY 91 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE---------------APQLRDEYRTYKLLGGTEGIPQVYY 91 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCC---------------cchHHHHHHHHHHHcCCCCCCceee
Confidence 35678999999999999999984 3589999998754332 234677888888774 688888887
Q ss_pred cccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC-----C
Q psy520 247 FCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-----F 320 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~-----~ 320 (455)
|-.+ .+..||+|++ |.||+|++.-+++ .++..+++.+|.|++.-++|+|+ +.+|.|||||+|+||+.- .
T Consensus 92 FGqeG~~NiLVidLL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~--k~LIYRDIKPdNFLIGrp~~k~~n 166 (449)
T KOG1165|consen 92 FGQEGKYNILVIDLL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHE--KDLIYRDIKPDNFLIGRPGTKDAN 166 (449)
T ss_pred eccccchhhhhhhhh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHh--cceeecccCccceeecCCCCCCCc
Confidence 7776 5668999999 9999999977654 69999999999999999999999 899999999999999743 4
Q ss_pred ceEEccccccccccCCCccccee----ccCCCCCCcCCcc-cccCCCCChhhHHHHHHHHHHHHcCCCCCCCCchh---h
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYT----ENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTI---L 392 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~----~~~~gt~~Y~aPE-~~~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~---~ 392 (455)
.+.|+|||+|+.........+.. ....||..||+-- .+..+.+.+-|+=|+|-|++..|-|..||.+.... .
T Consensus 167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~ 246 (449)
T KOG1165|consen 167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKE 246 (449)
T ss_pred eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHH
Confidence 68899999999887765544332 3468999999988 45556788999999999999999999999987632 2
Q ss_pred HHHHHHh--cccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 393 YYYLVVE--QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 393 ~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.+..+-+ ...++.++.. . .+.++...++ ..+-|. -..-|..+-+...+.++++
T Consensus 247 kYeKIGe~Kr~T~i~~Lc~----g-~P~efa~Yl~--yvR~L~--F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 247 KYEKIGETKRSTPIEVLCE----G-FPEEFATYLR--YVRRLD--FFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HHHHhccccccCCHHHHHh----c-CHHHHHHHHH--HHHhcC--cccCCCHHHHHHHHHHHHH
Confidence 2222221 1122222211 1 2223333344 333443 3445777776666666654
No 411
>KOG1164|consensus
Probab=99.92 E-value=1.4e-23 Score=207.91 Aligned_cols=258 Identities=24% Similarity=0.290 Sum_probs=184.9
Q ss_pred CCcCCCcccccCCEEEEEEEEcCC--cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCC----cceecc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKNG--MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH----VNLLRL 244 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~--~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l 244 (455)
.|.+.++||+|+||.||.|..... ..+|+|........... .+..|..++..+.. .++..+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-------------~l~~E~~vl~~l~~~~~~~~~~~~ 85 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-------------VLKIEIQVLKKLEKKNGPSHFPKL 85 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-------------cchhHHHHHHHHhhhcCCCCCCEE
Confidence 456779999999999999998753 47888887654322111 26678888888762 577777
Q ss_pred cccc-cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC---
Q psy520 245 LGFC-NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN--- 319 (455)
Q Consensus 245 ~~~~-~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~--- 319 (455)
++.. .. ...++||+.+ |.||.+...... ...++..++..|+.|++.+|++||+ .|++||||||+|++++..
T Consensus 86 ~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~--~G~iHRDiKp~N~~~g~~~~~ 161 (322)
T KOG1164|consen 86 LDHGRSTEDFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS--KGFIHRDIKPENFVVGQSSRS 161 (322)
T ss_pred EEeccCCCceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh--cCcccCCcCHHHeeecCCCCc
Confidence 7766 34 6789999988 999999876654 4679999999999999999999999 899999999999999865
Q ss_pred --CceEEcccccccccc--CCCc---ccce--eccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCc
Q psy520 320 --FVPKLGDFGIVKMSE--TSNM---KTMY--TENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNN 389 (455)
Q Consensus 320 --~~~kl~DFGla~~~~--~~~~---~~~~--~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~ 389 (455)
..+.|.|||+++... .... .... .....||..|+++.+..+ ..+.+.|+||++.++.|++.|..||....
T Consensus 162 ~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 162 EVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred ccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 468999999998322 2211 1111 234669999999996654 67899999999999999999999997654
Q ss_pred hh-hHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 390 TI-LYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 390 ~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.. ........ ........ . ....+..+.++...+-..+...+|....+...|+++.
T Consensus 242 ~~~~~~~~~~~---~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 242 MTDLKSKFEKD---PRKLLTDR-F----GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred ccchHHHHHHH---hhhhcccc-c----cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 22 11111111 00001110 1 1112233444444445578999999999999887764
No 412
>KOG0195|consensus
Probab=99.91 E-value=5.7e-25 Score=201.45 Aligned_cols=247 Identities=25% Similarity=0.359 Sum_probs=190.0
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-ccee
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
.+|.+.-.|+.|+|+|. |..+++|+++....... . ...|..|.-.|+-+.||||++++|.|.. ....
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~r-i----------srdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTAR-I----------SRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred hhhccCCCccccccccc-Ccchhhhhhhhhhcchh-h----------cchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 67899999999999998 68888899876544222 1 2338899999999999999999999988 7889
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
++..||+.|||+..|+... +-..+-.|+.+++.++++|++|||+++.-|.---|.+..+++|++.+++|+ .+-+++.-
T Consensus 264 ~isq~mp~gslynvlhe~t-~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsf 341 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSF 341 (448)
T ss_pred EeeeeccchHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeee
Confidence 9999999999999998754 345778899999999999999999986444455789999999999988875 23222211
Q ss_pred CCCcccceeccCCCCCCcCCcccccCCC----CChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcch
Q psy520 335 TSNMKTMYTENLTGTRPYMPPEAMHCQI----STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
.-....-.++||+||.+.... -.++|+|||++++||+.|...||.+.....--..+..+... .
T Consensus 342 -------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglr------v 408 (448)
T KOG0195|consen 342 -------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLR------V 408 (448)
T ss_pred -------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcccc------c
Confidence 111234578899999886543 34789999999999999999999887654433333322211 1
Q ss_pred hhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q psy520 411 EAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.-++.++.-+..|+.-|++.||.+||.++.|+-.|++++
T Consensus 409 ----~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 ----HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ----cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 112234455777888999999999999999999999875
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=5.9e-23 Score=199.25 Aligned_cols=258 Identities=31% Similarity=0.462 Sum_probs=192.4
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCc-ceecccccccC
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV-NLLRLLGFCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~ 250 (455)
|.+...||.|+||.||++.+. ..+|+|.+........ .....|.+|+.++..+.|+ +++++++++..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~----------~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 69 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS----------KEVERFLREIQILASLNHPPNIVKLYDFFQD 69 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccch----------hHHHHHHHHHHHHHHccCCcceeeEEEEEec
Confidence 345578999999999999987 7899999976544221 1145689999999999988 79999998766
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC-ceEEcccc
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-VPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~-~~kl~DFG 328 (455)
...+++++|+.++++.+.+........++......++.|++.++.|+|+ .+++|||+||+||+++..+ .++++|||
T Consensus 70 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~--~~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 70 EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS--KGIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeeecCCCCeEEEeccC
Confidence 4468999999999999666652211268999999999999999999999 8899999999999999998 79999999
Q ss_pred ccccccCCCcccc---eeccCCCCCCcCCcccccC----CCCChhhHHHHHHHHHHHHcCCCCCCCCch----hhHHHHH
Q psy520 329 IVKMSETSNMKTM---YTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNT----ILYYYLV 397 (455)
Q Consensus 329 la~~~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~----~~s~~sDi~SlGvvl~elltG~~p~~~~~~----~~~~~~~ 397 (455)
.++.......... ......||..|+|||.+.+ ..+..+|+||+|++++++++|..||..... .......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 227 (384)
T COG0515 148 LAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKII 227 (384)
T ss_pred cceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHH
Confidence 9985544332211 2356789999999997754 568899999999999999999999876653 1111111
Q ss_pred Hhcccc-hhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 398 VEQEVP-VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 398 ~~~~~~-~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+ .......... ......+.+++..++..+|..|.+..+...
T Consensus 228 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 228 LELPTPSLASPLSPSNP----ELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred HhcCCcccccccCcccc----chhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 111111 0000000000 122345778888999999999999887654
No 414
>KOG1163|consensus
Probab=99.91 E-value=1.8e-23 Score=188.84 Aligned_cols=255 Identities=20% Similarity=0.261 Sum_probs=183.6
Q ss_pred CCcCCCcccccCCEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCC-cceecccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH-VNLLRLLGFC 248 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~ 248 (455)
-|++.++||.|+||.+|.|..- +|..||||.-....... ++.-|..+...+++ ..|..+..|.
T Consensus 16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp---------------qL~yEskvY~iL~~g~GiP~i~~y~ 80 (341)
T KOG1163|consen 16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP---------------QLLYESKVYRILQGGVGIPHIRHYG 80 (341)
T ss_pred ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc---------------chhHHHHHHHHhccCCCCchhhhhc
Confidence 3567799999999999999864 59999999986554422 26678888888875 4555566666
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC---CCceEE
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKL 324 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~---~~~~kl 324 (455)
.+ ....+||+.+ |.||++.+.-+.. .++..+++-++-|++.-++|+|. +++|||||||+|+|.+- ...+.+
T Consensus 81 ~e~~ynvlVMdLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~--r~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 81 TEKDYNVLVMDLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHL--RNFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred cccccceeeeecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHh--hccccccCCccceeeccccccceEEE
Confidence 66 7778999999 9999999876544 68999999999999999999999 89999999999999974 357889
Q ss_pred ccccccccccCCCcccce----eccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHH---HH
Q psy520 325 GDFGIVKMSETSNMKTMY----TENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYY---YL 396 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~----~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~---~~ 396 (455)
+|||+++.........+. .....||..|.+--+..| ..+.+-|+=|+|.||....-|..||.+....... ..
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEk 235 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEK 235 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHH
Confidence 999999877654433222 234689999988776654 4577899999999999999999999987643322 22
Q ss_pred HHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q psy520 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
+.+.... -.+......+ +..+.-.+.-|=...-+.-|...-+.+.+.-+
T Consensus 236 I~EkK~s--~~ie~LC~G~-----P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 236 ISEKKMS--TPIEVLCKGF-----PAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred HHHhhcC--CCHHHHhCCC-----cHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 2221111 1111111122 22233335556566666667766655554433
No 415
>cd08309 Death_IRAK Death domain of Interleukin-1 Receptor-Associated Kinases. Death Domains (DDs) found in Interleukin-1 (IL-1) Receptor-Associated Kinases (IRAK1-4) and similar proteins. IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. All four types are involved in signal transduction involving IL-1 and IL-18 receptors, Toll-like receptors, nuclear factor-kappaB, and mitogen-activated protein kinase pathways. IRAK1 and IRAK4 are active kinases while IRAK2 and IRAK-M (also called IRAK3) are inactive. In general, IRAKs are expressed ubiquitously, except for IRAK-M which is detected only in macrophages. The insect homologs, Pelle and Tube, are important components of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and also in the innate immune response. Most members have an N-terminal DD followed by a kinase domain. In general, DDs are protein-protein interaction domains found in a variety of domain a
Probab=99.90 E-value=5.7e-24 Score=170.35 Aligned_cols=92 Identities=27% Similarity=0.459 Sum_probs=88.2
Q ss_pred ceeeecCHHHHHHhhhhcCC--cchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCC
Q psy520 11 IEIRHLKQYVVHELGIILNE--RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRR 88 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~ 88 (455)
||||+||++++++||.+||+ +++|++||+.|+++.| .+||++.||+.||..+++ |+|||++||++||++
T Consensus 1 ~~i~~Lp~~~~~~L~~~LD~~~~~~W~~LA~~i~~~~~---~~~~~~~~i~~~e~~~~~---g~SPt~~LL~~W~~~--- 71 (95)
T cd08309 1 TYIRQLPYSVLARLCKVLDPLELKGWRQLASLIPKGLG---GPRYDLTDVRQIESMKQR---GRSPTRELLWDWGTQ--- 71 (95)
T ss_pred CcceeCCHHHHHHHHHHhCCcccCChHHHHHHhccccc---cCCcCHHHHHHHHHHhhc---CCChHHHHHHHHHhc---
Confidence 79999999999999999999 9999999999999988 889999999999999884 999999999999998
Q ss_pred CCcHHHHHHHHHhcchhhhhhhh
Q psy520 89 RPRLSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 89 ~~~~~~l~~~l~~~~l~~~~~~~ 111 (455)
|+||++|+++|.+.++++|++++
T Consensus 72 ~~Tv~~L~~~L~~~~l~~A~~~i 94 (95)
T cd08309 72 NATVQDLVQVLVQLELYRAADLL 94 (95)
T ss_pred CCCHHHHHHHHHHcccHHHHHHh
Confidence 99999999999999999999875
No 416
>cd08795 Death_IRAK2 Death domain of Interleukin 1 Receptor Associated Kinase-2. Death Domain (DD) of Interleukin-1 Receptor-Associated Kinase 1 (IRAK1). IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. They are involved in signal transduction pathways involving IL-1 and IL-18 receptors, Toll-like receptors (TLRs), nuclear factor-kappaB (NF-kB), and mitogen-activated protein kinases (MAPKs). IRAKs contain an N-terminal DD domain and a C-terminal kinase domain. IRAK2 is an essential component of several signaling pathways, including NF-kappaB and the IL-1 signaling pathways. It is an inactive kinase that participates in septic shock mediated by TLR4 and TLR9. It plays a redundant role with IRAK1 in early NF-kB and MAPK responses, and remains present at later stages whereas IRAK1 disappears. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-as
Probab=99.90 E-value=4.8e-24 Score=163.84 Aligned_cols=84 Identities=17% Similarity=0.290 Sum_probs=76.5
Q ss_pred eeeecCHHHHHHhhhhcCCcchHHHHHHHhh--cCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCC
Q psy520 12 EIRHLKQYVVHELGIILNERDDWKKIMSIVT--VDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRR 89 (455)
Q Consensus 12 ~i~~l~~~~~~~l~~~ld~~~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~ 89 (455)
|||.||.+|+++||++||++++|+.++...+ .+ |+|+|.||++++ +|+|||+|||++||++ |
T Consensus 2 ~iy~lP~~v~~~lc~~lDsl~~w~~~~~a~~~~~~----------q~~vr~ie~~~~---~G~SpT~eLL~~Wg~~---N 65 (88)
T cd08795 2 YVYQLPAWVLDDFCRNMDALSDWDWMRFASYVITD----------QTQLRKIKSMEW---TGVSITRELMWWWGMR---L 65 (88)
T ss_pred chhhCCHHHHHHHHHHHcccchHHHHHHHHHhccc----------HHHHHHHHHHHH---cCCChHHHHHHHHHcC---C
Confidence 8999999999999999999999996665544 33 889999999988 5999999999999998 9
Q ss_pred CcHHHHHHHHHhcchhhhhhhh
Q psy520 90 PRLSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 90 ~~~~~l~~~l~~~~l~~~~~~~ 111 (455)
+||++|+++|.+.++++|++++
T Consensus 66 ~TV~~L~~lL~~~~l~rA~~ii 87 (88)
T cd08795 66 ATVQQLVDLLQRLELYRAAQII 87 (88)
T ss_pred CCHHHHHHHHHHCccHHHHHHh
Confidence 9999999999999999999865
No 417
>KOG0590|consensus
Probab=99.89 E-value=7e-24 Score=223.92 Aligned_cols=260 Identities=20% Similarity=0.255 Sum_probs=185.5
Q ss_pred CCcCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
+-.....+|.|++|.|+...... .+.++.|..... ..... ..... ...+..|+.+-..+.|||++..+....
T Consensus 319 y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~--s~~~~----~~~i~sE~~i~~~l~h~~~~e~l~~~~ 391 (601)
T KOG0590|consen 319 YGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTE--SERKY----NYNITSEFCIGSSLSHPNIIETLDIVQ 391 (601)
T ss_pred cCCccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcc--cHHHH----hhhhhhheeecccccCCchhhhHHHHh
Confidence 33567899999999777776432 444555554321 10110 11111 112667888899999999999888665
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccc
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ ....-+||||++ +|..++... ..++...+..++.|++.|+.|+|+ .||.|||+|++|+++..+|.+||+|||
T Consensus 392 ~~~~~~~~mE~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~--~GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 392 EIDGILQSMEYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHS--MGLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred hcccchhhhhcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHh--cCceeccCccccEEEecCCceEEeecC
Confidence 5 333345999999 999998873 358888999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCcc-cceeccCCCCCCcCCcccccC-CCCC-hhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchh
Q psy520 329 IVKMSETSNMK-TMYTENLTGTRPYMPPEAMHC-QIST-KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 329 la~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~-~~s~-~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
.+..+...... ......++|+.+|+|||++.+ .+.+ ..||||.|+|+..|.+|+.||.........+..........
T Consensus 466 ~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~ 545 (601)
T KOG0590|consen 466 AASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRN 545 (601)
T ss_pred cceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccc
Confidence 98877655322 244567899999999998765 4544 78999999999999999999976542211110000000000
Q ss_pred hhcchhhcCC-ChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 406 EVLDKEAGEW-NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~-~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+.. -....+..-+.+|.++++.+|.+|.++++|++
T Consensus 546 ----~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 546 ----IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ----cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000000 12344555777899999999999999999975
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=8.2e-23 Score=186.70 Aligned_cols=152 Identities=16% Similarity=0.158 Sum_probs=111.4
Q ss_pred CCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCC------cch-------hHhhhhhHHHHHHHHHHHHcCCCcce
Q psy520 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSN------SDN-------TEAAMIPILLFENEVQTLSQCKHVNL 241 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~------~~~-------~~~~~~~~~~~~~E~~~l~~l~h~ni 241 (455)
...||+|+||.||+|...+|+.||||+++......... ... ............+|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36899999999999998789999999998653211110 000 00001112234569999999988776
Q ss_pred ecccccccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCeEecCCCCCcEEECCCC
Q psy520 242 LRLLGFCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYL-HSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 242 v~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~L-H~~~~~iiH~Dikp~NILl~~~~ 320 (455)
.....+.. ...+|||||++|+++...... ..+++......++.|++.+|.++ |+ .||+||||||+|||++ ++
T Consensus 82 ~~p~~~~~-~~~~iVmE~i~g~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~l~H~--~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILL-KSHVLVMEFIGDDGWAAPRLK---DAPLSESKARELYLQVIQIMRILYQD--CRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEe-cCCEEEEEEeCCCCCcchhhh---cCCCCHHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEEE-CC
Confidence 44333222 234899999998877655333 24689999999999999999999 68 7899999999999998 47
Q ss_pred ceEEccccccccc
Q psy520 321 VPKLGDFGIVKMS 333 (455)
Q Consensus 321 ~~kl~DFGla~~~ 333 (455)
.++|+|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999998754
No 419
>cd08796 Death_IRAK-M Death domain of Interleukin 1 Receptor Associated Kinase-M. Death Domain (DD) of Interleukin-1 Receptor-Associated Kinase M (IRAK-M). IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. They are involved in signal transduction pathways involving IL-1 and IL-18 receptors, Toll-like receptors(TLRs), nuclear factor-kappaB (NF-kB), and mitogen-activated protein kinases (MAPKs). IRAKs contain an N-terminal DD domain and a C-terminal kinase domain. IRAK-M, also called IRAK-3, is an inactive kinase present only in macrophages in an inducible manner. It is a negative regulator of TLR signaling and it contributes to the attenuation of NF-kB activation. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitme
Probab=99.89 E-value=3.1e-23 Score=160.94 Aligned_cols=85 Identities=14% Similarity=0.246 Sum_probs=78.7
Q ss_pred ceeeecCHHHHHHhhhhcCCcc---hHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCC
Q psy520 11 IEIRHLKQYVVHELGIILNERD---DWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGR 87 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~~~---~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~ 87 (455)
|-+|.||++|+++||++||+++ +|++||+.|+.+ +.|+|.||++++ +|+|||+|||++||++
T Consensus 1 ~~ly~lP~~v~~~lc~~LDs~~~~~~W~~lA~~i~~~----------~~~vr~ie~~~~---~G~SPT~eLL~~Wg~~-- 65 (89)
T cd08796 1 TLLFDLPPVLLGSLCALLDSGVGGLGWRTLAERLSSS----------WLEVRHIEKYVV---QGKSGTRELLWSWAQK-- 65 (89)
T ss_pred CchhhCCHHHHHHHHHHhcCCCccccHHHHHHHHhcc----------HHHHHHHHHHHH---cCCCcHHHHHHHHHcc--
Confidence 4689999999999999999877 999999999832 889999999988 5999999999999998
Q ss_pred CCCcHHHHHHHHHhcchhhhhhhh
Q psy520 88 RRPRLSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 88 ~~~~~~~l~~~l~~~~l~~~~~~~ 111 (455)
|+||++|+++|.+.++++|++++
T Consensus 66 -n~TV~eL~~~L~~~~l~rA~~li 88 (89)
T cd08796 66 -NKTVGDLLQVLDEMGHARAISLF 88 (89)
T ss_pred -CCCHHHHHHHHHHcCcHHHHHhh
Confidence 99999999999999999999865
No 420
>PF14786 Death_2: Tube Death domain; PDB: 1D2Z_B.
Probab=99.88 E-value=2.6e-23 Score=169.90 Aligned_cols=118 Identities=44% Similarity=0.791 Sum_probs=91.2
Q ss_pred CCCceeeecCHHHHHHhhhhcCCcchHHHHHHHhhcCCCCCC----C-----CCcchHHHHHHHHhhccCCCCCCchHHH
Q psy520 8 TEDIEIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDPLK----P-----LKYSAKDIKIVERAGKRNFPERGCTDIF 78 (455)
Q Consensus 8 ~~~~~i~~l~~~~~~~l~~~ld~~~~w~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~s~t~~l 78 (455)
+.+|+||+||.+.+.+|+.+||.+ |+++|+.|++..|+.. . +||+.+|++.||..++| .+++|||+.|
T Consensus 2 ~r~tEiRkl~~~~~~~L~~ILd~~--WrklM~~IPk~l~d~~~~~~~~~~~~~KYt~~hi~~Ie~~a~r-~~~~s~s~il 78 (137)
T PF14786_consen 2 TRNTEIRKLPPSDLYRLASILDIN--WRKLMSIIPKKLGDVQQPSGSGLYPIPKYTSQHISLIEEAAER-LQNRSCSEIL 78 (137)
T ss_dssp -TTSBGGGS-HHHHHHHHHHHHGG--HHHHHHH-BSS---HHHHHSTT-HHHBSS-HHHHHHHHHHHHH-STTS-HHHHH
T ss_pred CccchhhcCCHHHHHHHHHHhchh--HHHHHHHccccccccccccccccccccccchhHHHHHHHHHHh-ccCCcHHHHH
Confidence 678999999999999999999988 9999999999864322 2 59999999999999963 2899999999
Q ss_pred HHhhhcCCCC--CCcHHHHHHHHHhcchhhhhhhhccccccC--CCCCCCCchh
Q psy520 79 LDEWGTSGRR--RPRLSDLIMFLKKAELHQAARYVEVDVLKK--PESPGDNTEA 128 (455)
Q Consensus 79 l~~w~~~~~~--~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~ 128 (455)
|++|||+|+. +|||++|+++|.+.+++|||+++..+.++. |++|..+++|
T Consensus 79 ldEWgTSGr~~eRPTl~~Ll~LLvkael~rAADyva~~~Lke~~p~RP~~GPaA 132 (137)
T PF14786_consen 79 LDEWGTSGRKNERPTLGHLLQLLVKAELFRAADYVAVDILKEEPPARPDDGPAA 132 (137)
T ss_dssp HHHHHT-SSTTTS-BHHHHHHHHHHTT-HHHHHHHHHHTT--------SSSTTS
T ss_pred HHHhhccCcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 9999999987 999999999999999999999999988876 5556666554
No 421
>KOG1240|consensus
Probab=99.87 E-value=5.7e-23 Score=217.78 Aligned_cols=246 Identities=23% Similarity=0.277 Sum_probs=175.6
Q ss_pred CCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cce
Q psy520 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
.+.||.+.|=.|.+|++.+|. |+||++-+....-.-. ...+-..|++ ....+|||++++.-.-.. ...
T Consensus 28 ~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~---------~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAA 96 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLR---------PFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAA 96 (1431)
T ss_pred ecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCch---------HHHHHHHHHH-HHhhcCCcccchHHHHHhhHHH
Confidence 378999999999999998766 9999987654322211 1222233444 555689999999876544 566
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|||-+|. .-+|+|++.. .+-+...+...|+.|++.||.-+|+ .||+|||||.+||||+.-..+.|+||...+..
T Consensus 97 ylvRqyv-khnLyDRlST---RPFL~~iEKkWiaFQLL~al~qcH~--~gVcHGDIKsENILiTSWNW~~LtDFAsFKPt 170 (1431)
T KOG1240|consen 97 YLVRQYV-KHNLYDRLST---RPFLVLIEKKWIAFQLLKALSQCHK--LGVCHGDIKSENILITSWNWLYLTDFASFKPT 170 (1431)
T ss_pred HHHHHHH-hhhhhhhhcc---chHHHHHHHHHHHHHHHHHHHHHHH--cCccccccccceEEEeeechhhhhcccccCCc
Confidence 7888888 6799999987 6778889999999999999999999 88999999999999999999999999877654
Q ss_pred cCCCccc----ceeccCCCCCCcCCcccccC------------CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHH
Q psy520 334 ETSNMKT----MYTENLTGTRPYMPPEAMHC------------QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 334 ~~~~~~~----~~~~~~~gt~~Y~aPE~~~~------------~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
......+ ....+...-..|+|||.|.. ..+++.||||+|||++|+++ |++||.-.. .+.+..
T Consensus 171 YLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ-L~aYr~ 249 (1431)
T KOG1240|consen 171 YLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ-LLAYRS 249 (1431)
T ss_pred cCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH-HHhHhc
Confidence 3332211 11122223346999996621 14678999999999999999 788886432 111111
Q ss_pred HHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
. +......++... .. ..++.+|..|++.||.+|.+++++++.
T Consensus 250 -~-~~~~~e~~Le~I-ed-------~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 250 -G-NADDPEQLLEKI-ED-------VSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred -c-CccCHHHHHHhC-cC-------ccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0 011111222111 11 127888999999999999999999876
No 422
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=2.7e-21 Score=176.87 Aligned_cols=155 Identities=16% Similarity=0.192 Sum_probs=113.4
Q ss_pred CCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCc----------ch---hHhhhhhHHHHHHHHHHHHcCCCcce
Q psy520 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNS----------DN---TEAAMIPILLFENEVQTLSQCKHVNL 241 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~----------~~---~~~~~~~~~~~~~E~~~l~~l~h~ni 241 (455)
...||+|+||.||+|.+.+|+.||||+++.......... .. ..........+..|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999999999987899999999987532111000 00 00001112335689999999999987
Q ss_pred ecccccccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 242 LRLLGFCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 242 v~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
.....+... ..+|||||++|+++...... ..+++......++.+++.++.++|+. .||+||||||+||+++ ++.
T Consensus 82 ~~p~~~~~~-~~~lVmE~~~g~~~~~~~l~---~~~~~~~~~~~i~~~l~~~l~~lH~~-~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLK-KNVLVMEFIGDDGSPAPRLK---DVPLEEEEAEELYEQVVEQMRRLYQE-AGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEec-CCEEEEEEecCCCchhhhhh---hccCCHHHHHHHHHHHHHHHHHHHHh-CCEecCCCChhhEEEE-CCC
Confidence 544333222 34899999998865443222 23578889999999999999999972 4799999999999999 889
Q ss_pred eEEccccccccccC
Q psy520 322 PKLGDFGIVKMSET 335 (455)
Q Consensus 322 ~kl~DFGla~~~~~ 335 (455)
++|+|||++.....
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999876543
No 423
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2.1e-21 Score=176.84 Aligned_cols=190 Identities=18% Similarity=0.190 Sum_probs=140.8
Q ss_pred CCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-CcceecccccccCcce
Q psy520 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCNNIMN 253 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 253 (455)
...|++|+||+||.+.. .+.+++.+.+........ ......|.+|+++|+++. |+++..++++ ...
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~---------~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---~~~ 73 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLR---------GVAWWLARREALALRQLDGLPRTPRLLHW---DGR 73 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhh---------hHHHHHHHHHHHHHHhcCCCCCCCEEEEE---cCE
Confidence 47899999999998776 478888887754332110 011235889999999995 5788888876 446
Q ss_pred eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCC-CCCcEEECCCCceEEcccccccc
Q psy520 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV-KSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Di-kp~NILl~~~~~~kl~DFGla~~ 332 (455)
+++|+|+.|.+|...+.. ....++.+++.+|.++|+ +||+|||| ||+|||++.++.++|+|||++..
T Consensus 74 ~lvmeyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~--~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHR--CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred EEEEeeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHH--CcCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 899999999998654321 113577899999999999 89999999 79999999999999999999986
Q ss_pred ccCCCc-----c-c----ceeccCCCCCCcCCcccc--cCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCc
Q psy520 333 SETSNM-----K-T----MYTENLTGTRPYMPPEAM--HCQIS-TKTDVFSYGVILLELLTGMKPIDDNN 389 (455)
Q Consensus 333 ~~~~~~-----~-~----~~~~~~~gt~~Y~aPE~~--~~~~s-~~sDi~SlGvvl~elltG~~p~~~~~ 389 (455)
...... . . ........++.|++|+.. ....+ ...+.++-|.-+|.++|+..+...++
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 543321 0 0 001112367888888833 33344 57899999999999999988876544
No 424
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=6.7e-21 Score=182.10 Aligned_cols=232 Identities=23% Similarity=0.292 Sum_probs=147.6
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCC---c-------c-
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH---V-------N- 240 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~-------n- 240 (455)
..+..||.|+||.||.+++.. |+++|||+........ ....+.+.+|.-....+.+ | .
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~----------~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~ 84 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADAS----------ANEYEQLKEEQLAITLFPGVKNPKEAYRHLRF 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTH----------TTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccc----------hHHHHHHHHHHHHhhhhccCCCHHHHHHhceE
Confidence 345889999999999999975 8999999987554211 1124456666654444322 1 1
Q ss_pred -----eecccc---cc---cC-c-----ceeEEEEeccCCCHHHHHhh---cCC-CCCCCHHHHHHHHHHHHHHHHHHHc
Q psy520 241 -----LLRLLG---FC---NN-I-----MNCIVYEYMCNGSLYDRLAR---VNN-TPPLDSNKRYSIALGVAEALHYLHS 299 (455)
Q Consensus 241 -----iv~l~~---~~---~~-~-----~~~lV~e~~~~gsL~~~l~~---~~~-~~~l~~~~~~~i~~~i~~gL~~LH~ 299 (455)
++++-+ +. .+ . ..+++|+-+ -++|.+.+.. ... ...+....+..+..|+++.+++||+
T Consensus 85 l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~ 163 (288)
T PF14531_consen 85 LVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS 163 (288)
T ss_dssp ---SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh
Confidence 111111 11 11 1 336788887 6788877543 221 1234455677888999999999999
Q ss_pred CCCCeEecCCCCCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccccC---------CCCChhhHHH
Q psy520 300 LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---------QISTKTDVFS 370 (455)
Q Consensus 300 ~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---------~~s~~sDi~S 370 (455)
.|++|+||||+|++++.+|.++|+||+.....+... .. ...+..|.|||.... .++.+.|.|+
T Consensus 164 --~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~ 235 (288)
T PF14531_consen 164 --YGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY-----RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ 235 (288)
T ss_dssp --TTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE-----EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH
T ss_pred --cceEecccceeeEEEcCCCCEEEcChHHHeecCcee-----ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHH
Confidence 899999999999999999999999999776543321 11 234577999996522 2577899999
Q ss_pred HHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCC
Q psy520 371 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKR 439 (455)
Q Consensus 371 lGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~R 439 (455)
+|+++|.|.+|..||+........ +....... ++++.++.||.++|..+|.+|
T Consensus 236 LG~~ly~lWC~~lPf~~~~~~~~~--------------~~~f~~C~--~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 236 LGITLYSLWCGRLPFGLSSPEADP--------------EWDFSRCR--DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHHSS-STCCCGGGSTS--------------GGGGTTSS-----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHHHccCCCCCCCccccc--------------cccchhcC--CcCHHHHHHHHHHccCCcccC
Confidence 999999999999999866422100 00122222 678889999999999999987
No 425
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=1.8e-21 Score=180.81 Aligned_cols=176 Identities=13% Similarity=0.113 Sum_probs=127.6
Q ss_pred CCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN 250 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.|++.+.||.|+||.||+... ++..+|||.++......... ......-..|.+|++.+.++.||+|..+..+...
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~----~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERF----LKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHH----HHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 467779999999999999766 46789999997554311100 0000012236899999999999999999876432
Q ss_pred ---------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc
Q psy520 251 ---------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 251 ---------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
...+|||||++|.+|.+... ++. ....+++.++..+|+ .|++|||+||+||+++.+|
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~--~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQ--HGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHH--cCCccCCCChHHEEEeCCC-
Confidence 34789999999999987632 232 245699999999999 8999999999999999998
Q ss_pred eEEccccccccccCCCcccceeccCCCCCCcCCcccccCCCCChhhHHHHHHHHHHHH
Q psy520 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELL 379 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~s~~sDi~SlGvvl~ell 379 (455)
++|+|||............ . | ++...+..++|+||||+++.-..
T Consensus 173 i~liDfg~~~~~~e~~a~d----~------~----vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAKD----R------I----DLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhHH----H------H----HHHhHhcccccccceeEeehHHH
Confidence 9999999876543221000 0 1 12223456899999999876554
No 426
>KOG0603|consensus
Probab=99.84 E-value=3.7e-22 Score=202.41 Aligned_cols=226 Identities=24% Similarity=0.300 Sum_probs=178.5
Q ss_pred cccccCCEEEEEEEE----cCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-CcceecccccccC-
Q psy520 177 KLGEGQFGTVYYGKL----KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCNN- 250 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~- 250 (455)
.+|+|+||.|++++- +.|+-+|+|++++......... ....|-.++..++ ||.+|++.-.+..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-----------~t~~er~il~~~~~~~f~v~lhyafqt~ 69 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-----------HTKQERIILAFVHNTPFLVKLHYAFQTD 69 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-----------ccccHHHHHhhccCCCceeeeeeeeccc
Confidence 379999999997652 2378899999987654332211 2456788888887 9999999775544
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...+++++|..||.|..++.. ...+.......+...++-++.++|+ .+++|||+|++||+++.+|++++.|||++
T Consensus 70 ~kl~l~ld~~rgg~lft~l~~---~~~f~~~~~~~~~aelaLald~lh~--l~iiyrd~k~enilld~~Ghi~~tdfgls 144 (612)
T KOG0603|consen 70 GKLYLILDFLRGGDLFTRLSK---EVMFDELDVAFYLAELALALDHLHK--LGIAYRDYKLENVLLLLEGHIKLTDFGLS 144 (612)
T ss_pred cchhHhhhhcccchhhhcccc---CCchHHHHHHHHHHHHHHHHhhcch--hHHHHhcccccceeecccCccccCCchhh
Confidence 888999999999999998876 4457888888899999999999999 78999999999999999999999999998
Q ss_pred ccccCCCcccceeccCCCCCCcCCcccccCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcch
Q psy520 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
+....... .+||..|||||++. ....++|.||||++.+||+||..||.. .....+...+..
T Consensus 145 ke~v~~~~-------~cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~------- 205 (612)
T KOG0603|consen 145 KEAVKEKI-------ACGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELE------- 205 (612)
T ss_pred hHhHhhhh-------cccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccC-------
Confidence 87654331 18999999999887 667789999999999999999999987 122222211222
Q ss_pred hhcCCChhHHHHHHHHHHHHhcccCcCCCCCH
Q psy520 411 EAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
.+......+++++..++..+|.+|.-.
T Consensus 206 -----~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 206 -----MPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred -----CchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 234556668888888888998888654
No 427
>cd08794 Death_IRAK1 Death domain of Interleukin 1 Receptor Associated Kinase-1. Death Domain (DD) of Interleukin-1 Receptor-Associated Kinase 1 (IRAK1). IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. They are involved in signal transduction pathways involving IL-1 and IL-18 receptors, Toll-like receptors, nuclear factor-kappaB (NF-kB), and mitogen-activated protein kinases (MAPKs). IRAKs contain an N-terminal DD domain and a C-terminal kinase domain. IRAK1 is an active kinase and also plays adaptor functions. It binds to the MyD88-IRAK4 complex via its DD, which facilitates its phosphorylation by IRAK4, activating it for further auto-phosphorylation. Hyper-phosphorylated IRAK1 forms a cytosolic complex with TRAF6, leading to the activation of NF-kB and MAPK pathways. IRAK1 is involved in autoimmunity and may be associated with lupus pathogenesis. DDs are protein-protein interaction domains found in a variety of domain architectures.
Probab=99.83 E-value=8e-21 Score=140.34 Aligned_cols=81 Identities=19% Similarity=0.390 Sum_probs=74.9
Q ss_pred ceeeecCHHHHHHhhhhcCC--cchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCC
Q psy520 11 IEIRHLKQYVVHELGIILNE--RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRR 88 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~ 88 (455)
.|+|+||++|+.+||.+||+ +.+|.+||+.|.+| |+++|.+|+ +.|+|.||+|.||++
T Consensus 1 ~~Ly~lP~~vm~~fc~~MDsls~~dW~~fAS~ii~d----------qtelR~~E~-------~~s~T~elmw~W~~R--- 60 (84)
T cd08794 1 RFLYELPPSVMWRFCLVMDSLSDLDWTRFASEIIKD----------QTELRLLEQ-------SGRRTDWVMWRWENR--- 60 (84)
T ss_pred CccccCCHHHHHHHHHHHcccccccHHHHHHHHhcc----------HHHHHHHHH-------cCCcHHHHHHHHHhc---
Confidence 38999999999999999998 57888999999998 999999992 448999999999998
Q ss_pred CCcHHHHHHHHHhcchhhhhhhh
Q psy520 89 RPRLSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 89 ~~~~~~l~~~l~~~~l~~~~~~~ 111 (455)
|+||++|+++|.+.+++||++++
T Consensus 61 n~tV~~Ll~iL~~L~l~RA~~ii 83 (84)
T cd08794 61 NGRVGELLDILERLQLLRARDVI 83 (84)
T ss_pred ccHHHHHHHHHHHhhhhhhhhhh
Confidence 99999999999999999999865
No 428
>KOG1023|consensus
Probab=99.82 E-value=3.7e-20 Score=187.70 Aligned_cols=211 Identities=27% Similarity=0.399 Sum_probs=156.4
Q ss_pred HHcCCCcceecccccccC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCe-EecCCC
Q psy520 233 LSQCKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPI-IHRDVK 310 (455)
Q Consensus 233 l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~i-iH~Dik 310 (455)
|+.+.|.|+.+++|.+.+ ...+.|.+||..|||.|.+... ...+++--...++.+++.|+.|||.. +| .||.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcC--cceeeeeec
Confidence 457899999999999888 7778899999999999999873 34688999999999999999999993 44 999999
Q ss_pred CCcEEECCCCceEEccccccccccCCCcccceeccCCCCCCcCCcccccCC--------CCChhhHHHHHHHHHHHHcCC
Q psy520 311 SANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ--------ISTKTDVFSYGVILLELLTGM 382 (455)
Q Consensus 311 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--------~s~~sDi~SlGvvl~elltG~ 382 (455)
+.|.++|..+.+||+|||+........... ......-..-|.|||.+++. .+.+.|+||||++++|+++.+
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~-~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPE-AHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred cccceeeeeEEEEechhhhccccccccccc-ccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999987664311000 01111223458999988653 466899999999999999999
Q ss_pred CCCCCCchh----hHHHHHHh-cccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhc
Q psy520 383 KPIDDNNTI----LYYYLVVE-QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 383 ~p~~~~~~~----~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.||+..... .....+.. ...+++..+... ......+..++..||..+|.+||++++|-..++.+.+
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELL------NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred CccccccccCChHHHHHHHHhcCCCCcCcchhhh------hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999874421 11111111 111111111111 1233356678999999999999999999988876653
No 429
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=8.5e-20 Score=172.48 Aligned_cols=156 Identities=15% Similarity=0.168 Sum_probs=113.2
Q ss_pred CCCcCCCcccccCCEEEEEEE--EcCCcEEEEEEeecccCcCCCCc------c-----hhHhhhhhHHHHHHHHHHHHcC
Q psy520 170 PYPRRGNKLGEGQFGTVYYGK--LKNGMEIAVKTLENNANYSSSNS------D-----NTEAAMIPILLFENEVQTLSQC 236 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~--~~~~~~vAvK~~~~~~~~~~~~~------~-----~~~~~~~~~~~~~~E~~~l~~l 236 (455)
..|.+.+.||+|+||.||+|. ..+|+.||||+++.......... . ...........+..|+.++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345677999999999999998 44689999999976432110000 0 0000011123467899999999
Q ss_pred CCcc--eecccccccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-eEecCCCCCc
Q psy520 237 KHVN--LLRLLGFCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-IIHRDVKSAN 313 (455)
Q Consensus 237 ~h~n--iv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~-iiH~Dikp~N 313 (455)
.+.. +.+++++ ...++||||+.|++|...... ..++...+...++.|++.++++||+ .| ++||||||+|
T Consensus 108 ~~~~i~~p~~~~~---~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~--~g~iiH~Dikp~N 179 (237)
T smart00090 108 YEAGVPVPKPIAW---RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYK--EGELVHGDLSEYN 179 (237)
T ss_pred HhcCCCCCeeeEe---cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHh--cCCEEeCCCChhh
Confidence 7532 3333332 345899999999888765432 2346666778999999999999999 88 9999999999
Q ss_pred EEECCCCceEEcccccccccc
Q psy520 314 VLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 314 ILl~~~~~~kl~DFGla~~~~ 334 (455)
|+++ ++.++|+|||.+....
T Consensus 180 Ili~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEEE-CCCEEEEEChhhhccC
Confidence 9999 8899999999887543
No 430
>KOG1166|consensus
Probab=99.81 E-value=2.5e-19 Score=193.47 Aligned_cols=188 Identities=21% Similarity=0.231 Sum_probs=148.8
Q ss_pred cCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcc----eecccccc
Q psy520 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN----LLRLLGFC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n----iv~l~~~~ 248 (455)
.+.+.||+|+||.||+|...+|+.||+|+-+...... |+--.+++.||+ +- |..+...+
T Consensus 701 ~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----------------fYI~~q~~~RLk-~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 701 CISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----------------FYICLQVMERLK-PQMLPSIMHISSAH 763 (974)
T ss_pred EEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----------------eeehHHHHHhhc-hhhhcchHHHHHHH
Confidence 5668999999999999998889999999987554321 444556667776 33 33333322
Q ss_pred c-CcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEEC-------CCC
Q psy520 249 N-NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-------ENF 320 (455)
Q Consensus 249 ~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~-------~~~ 320 (455)
. .+.-+||++|.+.|||.+++.. ...+++..++.++.|+++.+.+||. .+||||||||+|.||. ...
T Consensus 764 ~~~~~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~--~~IIHgDiKPDNfll~~~~~~~~~~~ 838 (974)
T KOG1166|consen 764 VFQNASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHA--MGIIHGDIKPDNFLLRREICADSDSK 838 (974)
T ss_pred ccCCcceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHh--cceecccCCcceeEeecccCCCCccc
Confidence 2 2555789999999999999984 5679999999999999999999999 8899999999999993 345
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCcccccCC-CCChhhHHHHHHHHHHHHcCCC
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMK 383 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~s~~sDi~SlGvvl~elltG~~ 383 (455)
.++|+|||.+.....-... ......++|-.+-.+|.+.|+ ++..+|.|.|+.+++-||.|+.
T Consensus 839 ~l~lIDfG~siDm~lfp~~-~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 839 GLYLIDFGRSIDMKLFPDG-TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ceEEEecccceeeeEcCCC-cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 7899999998765443222 223456788899999988775 6889999999999999999953
No 431
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=5.6e-19 Score=163.27 Aligned_cols=130 Identities=14% Similarity=0.203 Sum_probs=99.6
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-----CCcceecccccccC
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-----KHVNLLRLLGFCNN 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~ 250 (455)
..||+|+||.||. +......+||++...... ....+.+|+.+++.+ .||||++++|++.+
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~-------------~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et 72 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG-------------GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVET 72 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEeccccc-------------hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEe
Confidence 7899999999996 433233379988653221 024488999999999 57999999998766
Q ss_pred c----cee-EEEEe--ccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH-HHHHcCCCCeEecCCCCCcEEECC----
Q psy520 251 I----MNC-IVYEY--MCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL-HYLHSLSKPIIHRDVKSANVLLDE---- 318 (455)
Q Consensus 251 ~----~~~-lV~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL-~~LH~~~~~iiH~Dikp~NILl~~---- 318 (455)
+ ..+ +|+|| +.+|+|.+++... .+++. ..++.+++.++ +|||+ ++|+||||||+|||++.
T Consensus 73 ~~g~g~v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~--~~IvhrDlKp~NILl~~~~~~ 144 (210)
T PRK10345 73 DCGTGYVYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLD--NRIVTMELKPQNILCQRISES 144 (210)
T ss_pred CCCCeEEEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEeccCCC
Confidence 3 223 68999 5579999999652 35555 35678888887 99999 88999999999999974
Q ss_pred CCceEEcccc
Q psy520 319 NFVPKLGDFG 328 (455)
Q Consensus 319 ~~~~kl~DFG 328 (455)
++.++|+||+
T Consensus 145 ~~~~~LiDg~ 154 (210)
T PRK10345 145 EVIPVVCDNI 154 (210)
T ss_pred CCcEEEEECC
Confidence 3489999944
No 432
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=6.6e-19 Score=163.44 Aligned_cols=141 Identities=19% Similarity=0.233 Sum_probs=113.1
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-ccee
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
+.||+|++|.||+|.+. |..|+||+......... ..........+.+|+.++..+.|+++.....++.+ ...+
T Consensus 2 ~~l~~G~~~~vy~~~~~-~~~~~vK~~~~~~~~~~-----~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 75 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL-GIKAVIKWRIPKRYRHP-----ELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFI 75 (211)
T ss_pred cccccCceEEEEEEeeC-CCceEEEEeCCcCCcCh-----HHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCE
Confidence 57999999999999884 78899998753321110 01112224568899999999999988776665544 6778
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
+||||++|++|.+.+... .. .+..++.+++.+|.++|+ .+++|||++|+|||++ ++.++|+|||++..
T Consensus 76 lv~e~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~--~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 76 IVMEYIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHS--AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEEeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHh--CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999999998652 12 888999999999999999 8999999999999999 78999999998875
No 433
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=7.5e-19 Score=161.78 Aligned_cols=149 Identities=17% Similarity=0.186 Sum_probs=109.6
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHh---------hhhhHHHHHHHHHHHHcCCCcc--
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEA---------AMIPILLFENEVQTLSQCKHVN-- 240 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~E~~~l~~l~h~n-- 240 (455)
|.+.+.||+|+||.||++...+|+.||||+++............... .......+..|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 44558999999999999998789999999987543211110000000 0011234678999999998774
Q ss_pred eecccccccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 241 LLRLLGFCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 241 iv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+...++ ....++||||++|++|.+.... .....++.+++.++.++|+ .|++||||||+||++++++
T Consensus 97 v~~~~~---~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~--~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 97 VPKPID---WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYK--HGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCceee---cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHH--CCCCcCCCCcccEEEcCCC
Confidence 333333 2456899999999998764321 3456788999999999999 8999999999999999999
Q ss_pred ceEEcccccccccc
Q psy520 321 VPKLGDFGIVKMSE 334 (455)
Q Consensus 321 ~~kl~DFGla~~~~ 334 (455)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999986543
No 434
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.77 E-value=3.1e-18 Score=157.53 Aligned_cols=137 Identities=20% Similarity=0.270 Sum_probs=106.3
Q ss_pred cccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeE
Q psy520 177 KLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCI 255 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
.||+|+||.||+|.+. |..|++|+......... .-........+.+|++++..++|+++.....++.+ ...++
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~-----~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l 74 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHP-----ELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTI 74 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCc-----hHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEE
Confidence 4899999999999975 78999999654321110 00112224567899999999998875544433333 66789
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
||||++|++|.+.+.... . .++.+++.+|.+||+ .|++|||++|.||+++ ++.++++|||++..
T Consensus 75 v~e~~~g~~l~~~~~~~~---~-------~~~~~i~~~l~~lH~--~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 75 VMEYIEGKPLKDVIEEGN---D-------ELLREIGRLVGKLHK--AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEECCccHHHHHhhcH---H-------HHHHHHHHHHHHHHH--CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999999876511 1 789999999999999 8899999999999999 88999999998775
No 435
>KOG4158|consensus
Probab=99.77 E-value=2.8e-18 Score=165.15 Aligned_cols=196 Identities=21% Similarity=0.261 Sum_probs=138.1
Q ss_pred CCcceecccccccC----------------------------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHH
Q psy520 237 KHVNLLRLLGFCNN----------------------------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 288 (455)
Q Consensus 237 ~h~niv~l~~~~~~----------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 288 (455)
+|||||++++++.+ ...|+||.-+ ..+|..++-.. ..+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC----CCchHHHHHHHH
Confidence 69999999875421 2346788777 56888888752 356677788899
Q ss_pred HHHHHHHHHHcCCCCeEecCCCCCcEEE--CCCC--ceEEccccccccccCCCcccce---eccCCCCCCcCCcccccCC
Q psy520 289 GVAEALHYLHSLSKPIIHRDVKSANVLL--DENF--VPKLGDFGIVKMSETSNMKTMY---TENLTGTRPYMPPEAMHCQ 361 (455)
Q Consensus 289 ~i~~gL~~LH~~~~~iiH~Dikp~NILl--~~~~--~~kl~DFGla~~~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~ 361 (455)
|+++|+.|||+ +||.|||+|++|||+ |+|+ .+.|+|||++-.-......-.+ .-..-|...-||||+....
T Consensus 349 QlLEav~hL~~--hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 349 QLLEAVTHLHK--HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHH--ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999999 999999999999999 4444 5679999987543322111111 1234577889999987543
Q ss_pred C-------CChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhccc
Q psy520 362 I-------STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVF 434 (455)
Q Consensus 362 ~-------s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~ 434 (455)
. ..|+|.|+.|.+.||+++...||........+-.... +..++. -++.++..+++|+...+..
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-e~qLPa---------lp~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-ESQLPA---------LPSRVPPVARQLVFDLLKR 496 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-hhhCCC---------CcccCChHHHHHHHHHhcC
Confidence 2 3589999999999999999999987553322221111 111111 1234566688888899999
Q ss_pred CcCCCCCHHHHHHHH
Q psy520 435 EKDKRASMRDIVDLL 449 (455)
Q Consensus 435 dp~~RPs~~evl~~L 449 (455)
||.+|++..=..+.|
T Consensus 497 ~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 497 DPSKRVSPNIAANVL 511 (598)
T ss_pred CccccCCccHHHhHH
Confidence 999999876555544
No 436
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.76 E-value=5.3e-18 Score=179.21 Aligned_cols=141 Identities=21% Similarity=0.232 Sum_probs=110.1
Q ss_pred cCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-c
Q psy520 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
...++||+|+||+||+|.+. +..+++|+........ ...........+.+|++++++++|++++....++.+ .
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~-~~~~v~k~~~~~~~~~-----~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYL-GRDAVIKERVPKGYRH-----PELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred CccceeccCCcEEEEEEeec-CccceeEEEecccccc-----hhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 45689999999999999986 4556666543221100 000111224568899999999999998887666555 6
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||++|++|.+++. ....++.+++.+|.+||+ .+++||||||+|||+ .++.++|+|||+++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~--~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK--AGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh--CCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 6789999999999998875 346789999999999999 889999999999999 67899999999987
Q ss_pred cc
Q psy520 332 MS 333 (455)
Q Consensus 332 ~~ 333 (455)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 64
No 437
>KOG0606|consensus
Probab=99.73 E-value=3.6e-18 Score=181.54 Aligned_cols=202 Identities=25% Similarity=0.352 Sum_probs=137.5
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccCccee
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNNIMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 254 (455)
+.|..|++|-||.++++. .+.+|+ ++++... + ..+ ++.....|.+|
T Consensus 89 klisngAygavylvrh~~trqrfa~-kiNkq~l-------------i----lRn---ilt~a~npfvv------------ 135 (1205)
T KOG0606|consen 89 KLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-------------I----LRN---ILTFAGNPFVV------------ 135 (1205)
T ss_pred EeeccCCCCceeeeeccccccchhh-cccccch-------------h----hhc---cccccCCccee------------
Confidence 899999999999999874 678898 4433221 0 111 23333333333
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
|+-.+.+.. .++++... +.+++|||+ .||+|||+||+|.+|..-|++|+.|||+++...
T Consensus 136 --------gDc~tllk~---~g~lPvdm--------vla~Eylh~--ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 --------GDCATLLKN---IGPLPVDM--------VLAVEYLHS--YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred --------chhhhhccc---CCCCcchh--------hHHhHhhcc--CCeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 444444443 23344333 788999999 899999999999999999999999999987543
Q ss_pred CCCc------------ccceeccCCCCCCcCCccc-ccCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcc
Q psy520 335 TSNM------------KTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 401 (455)
Q Consensus 335 ~~~~------------~~~~~~~~~gt~~Y~aPE~-~~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 401 (455)
.... .......++||+.|.|||+ +..+|...+|+|++|+|+||.+-|..||++.......-......
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~ 274 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD 274 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh
Confidence 2211 0111245689999999995 46679999999999999999999999999987443332222111
Q ss_pred cchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC
Q psy520 402 VPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 402 ~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
...++- | ...+...+++|.+++..+|..|-
T Consensus 275 i~wpE~-d--------ea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 275 IEWPEE-D--------EALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cccccc-C--------cCCCHHHHHHHHHHHHhChHhhc
Confidence 111111 1 12234477888889999988883
No 438
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.68 E-value=1.9e-16 Score=149.92 Aligned_cols=147 Identities=18% Similarity=0.157 Sum_probs=106.8
Q ss_pred Cccc-ccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcce--ecccccccC--
Q psy520 176 NKLG-EGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL--LRLLGFCNN-- 250 (455)
Q Consensus 176 ~~LG-~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~-- 250 (455)
..|| .||.|+||.+... +..++||.+........-...+..........+.+|+.++.++.|+++ +..+++...
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5788 9999999999886 688999998643210000000000011124568899999999998875 555654322
Q ss_pred c---ceeEEEEeccC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 251 I---MNCIVYEYMCN-GSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 251 ~---~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
. ..++|+||++| .+|.+++.. .+++.. .+.+++.+|.+||+ .||+||||||+|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~--~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHD--AGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHH--CCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 689888764 235544 35789999999999 8999999999999999999999999
Q ss_pred ccccccc
Q psy520 327 FGIVKMS 333 (455)
Q Consensus 327 FGla~~~ 333 (455)
||.++..
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9987754
No 439
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=3.2e-16 Score=142.53 Aligned_cols=151 Identities=17% Similarity=0.199 Sum_probs=100.2
Q ss_pred CCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchh-----------HhhhhhHHHHHHHHHHHHcCCCcc--e
Q psy520 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNT-----------EAAMIPILLFENEVQTLSQCKHVN--L 241 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~E~~~l~~l~h~n--i 241 (455)
++.||+|+||+||+|.+.+++.||||+++............. ............|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999988789999999875432111100000 000000111235566666664432 3
Q ss_pred ecccccccCcceeEEEEeccCCCHHHH-HhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 242 LRLLGFCNNIMNCIVYEYMCNGSLYDR-LARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 242 v~l~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|.. .+++||||||+||+++ ++
T Consensus 82 ~~~~~~---~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~-~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL---NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYRE-AGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec---CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhc-cCcCcCCCChhhEEEE-CC
Confidence 333332 346899999999654321 22110 11 66788999999999999973 4799999999999999 89
Q ss_pred ceEEccccccccccC
Q psy520 321 VPKLGDFGIVKMSET 335 (455)
Q Consensus 321 ~~kl~DFGla~~~~~ 335 (455)
.++|+|||.+.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 999999999875443
No 440
>KOG1033|consensus
Probab=99.68 E-value=1.3e-17 Score=166.66 Aligned_cols=172 Identities=24% Similarity=0.332 Sum_probs=126.7
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++.|++|...+|.+||.+.......++.....++.|++.|+.| ++.+|+|+||.||+...+..+||+|||+..
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y-----k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY-----KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh-----ccchhhhccccccccccchhhhhhhhhhee
Confidence 467899999999999999876666678889999999999999999 479999999999999999999999999976
Q ss_pred cccCCCc---ccceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhh
Q psy520 332 MSETSNM---KTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 332 ~~~~~~~---~~~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
....... .........||..||+||.+.| .++.++||||||++|+|+++ =..++.... .
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~----------------t 468 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA----------------T 468 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH----------------h
Confidence 5544331 0112345689999999997764 68999999999999999997 222222111 0
Q ss_pred hcchhhcCCChh---HHHHHHHHHHHHhcccCcCCCCCHHHH
Q psy520 407 VLDKEAGEWNET---HVETLISIVFEKCCVFEKDKRASMRDI 445 (455)
Q Consensus 407 ~~d~~~~~~~~~---~~~~~l~~Li~~~l~~dp~~RPs~~ev 445 (455)
+-|-+-+.+++. +.+. -..|+.+++...|.+||++.++
T Consensus 469 ~~d~r~g~ip~~~~~d~p~-e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 469 LTDIRDGIIPPEFLQDYPE-EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhhhhcCCCChHHhhcCcH-HHHHHHHhcCCCcccCchHHHH
Confidence 011111222211 1111 2246889999999999955544
No 441
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.65 E-value=1e-15 Score=132.87 Aligned_cols=133 Identities=20% Similarity=0.213 Sum_probs=109.2
Q ss_pred CCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCC--cceecccccccC-c
Q psy520 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH--VNLLRLLGFCNN-I 251 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~-~ 251 (455)
.+.||+|.++.||++...+ ..++||....... ...+.+|+.++..++| .++.+++++... +
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---------------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~ 66 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---------------GADREREVAILQLLARKGLPVPKVLASGESDG 66 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc---------------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Confidence 3679999999999999874 8899999854321 1237889999999976 488888877665 6
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-SKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~-~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
..+++|||+.++++... +......++.+++.++.+||.. ..+++|||++|+||++++.+.++++|||.+
T Consensus 67 ~~~~v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~ 136 (155)
T cd05120 67 WSYLLMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYA 136 (155)
T ss_pred ccEEEEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccc
Confidence 78999999988877543 4566778899999999999985 247999999999999999999999999988
Q ss_pred ccc
Q psy520 331 KMS 333 (455)
Q Consensus 331 ~~~ 333 (455)
+..
T Consensus 137 ~~~ 139 (155)
T cd05120 137 GYG 139 (155)
T ss_pred cCC
Confidence 753
No 442
>KOG0590|consensus
Probab=99.63 E-value=4.1e-17 Score=172.67 Aligned_cols=254 Identities=20% Similarity=0.279 Sum_probs=180.5
Q ss_pred CcCCCcccccCCEEEEEEEEcC--CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccceecccccc
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFC 248 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 248 (455)
|++.+.||+|+|+.|-...... ...+|+|.+..... .. .. ......|..+-+.+. |.|++.+++..
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~--~~--~~-------~~~i~~e~~~~~~~s~h~n~~~~~~~~ 90 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPK--SE--DS-------SEHIDTETDIQKKLSKHSNTVHMIEPS 90 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCCC--cc--ch-------hhhcCccccccccccccccccccCCcc
Confidence 3445779999999998876533 44567776654331 00 00 122334777777776 99999999988
Q ss_pred cC-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCeEecCCCCCcEEECCCC-ceEEc
Q psy520 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLH-SLSKPIIHRDVKSANVLLDENF-VPKLG 325 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH-~~~~~iiH~Dikp~NILl~~~~-~~kl~ 325 (455)
.+ +..+++.+|..|+++.+.+... .....+....-.+..|+..++.|+| . .++.|+||||+|.+++..+ ..|++
T Consensus 91 ~~~~~~~~~~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~~--~~~~h~~ikP~n~~l~~s~~~l~~~ 167 (601)
T KOG0590|consen 91 SSPRSYLLSLSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHPE--NGVTHRDIKPSNSLLDESGSALKIA 167 (601)
T ss_pred CCCcccccccCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCcc--cccccCCCCCccchhccCCCcccCC
Confidence 77 7778899999999999888421 1224666777889999999999999 7 8899999999999999999 99999
Q ss_pred cccccccccCCCcccceeccCCC-CCCcCCcccccC--CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhccc
Q psy520 326 DFGIVKMSETSNMKTMYTENLTG-TRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~g-t~~Y~aPE~~~~--~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
|||+|................+| ++.|+|||.+.+ ...+..|+||.|+++.-+++|..|++........+.......
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~ 247 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK 247 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc
Confidence 99999877662222333445678 999999998766 346789999999999999999999987653322111111110
Q ss_pred chhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHH
Q psy520 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
......+.........+++.+++..+|..|.+.+++.
T Consensus 248 -------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 248 -------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred -------cccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 0001111222333355567788888899999887763
No 443
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.59 E-value=6.3e-15 Score=151.29 Aligned_cols=153 Identities=20% Similarity=0.172 Sum_probs=103.3
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCC--------------------C-cc------hhHhhhhhHHHHHH
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSS--------------------N-SD------NTEAAMIPILLFEN 228 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~--------------------~-~~------~~~~~~~~~~~~~~ 228 (455)
+.||.|++|.||+|++++|+.||||+.+......-. . .+ +..........|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 579999999999999999999999998764311000 0 00 00000001124666
Q ss_pred HHHHHHcCC----CcceecccccccC--cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHH-HHHHHHcCC
Q psy520 229 EVQTLSQCK----HVNLLRLLGFCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE-ALHYLHSLS 301 (455)
Q Consensus 229 E~~~l~~l~----h~niv~l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-gL~~LH~~~ 301 (455)
|...+.+++ |.+-+.+-..+.+ ...+|||||++|++|.+....... .. .+..++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~-- 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLR-- 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHh--
Confidence 776666652 3333343333322 457899999999999887654211 12 23456666666 4678898
Q ss_pred CCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 302 KPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
.|++|+|+||.||+++.++.++++|||++.....
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 8999999999999999999999999999876543
No 444
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.44 E-value=3.2e-13 Score=140.57 Aligned_cols=151 Identities=20% Similarity=0.201 Sum_probs=94.2
Q ss_pred CcccccCCEEEEEEEEcC-CcEEEEEEeecccCcC--------------------CCCc-c------hhHhhhhhHHHHH
Q psy520 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYS--------------------SSNS-D------NTEAAMIPILLFE 227 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~--------------------~~~~-~------~~~~~~~~~~~~~ 227 (455)
+.||+|++|+||+|++++ |+.||||+.++..... .... + +..........|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999987 9999999998653100 0000 0 0001111122355
Q ss_pred HHHHHHHcCC----CcceecccccccC--cceeEEEEeccCCCHHHH--HhhcCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q psy520 228 NEVQTLSQCK----HVNLLRLLGFCNN--IMNCIVYEYMCNGSLYDR--LARVNN-TPPLDSNKRYSIALGVAEALHYLH 298 (455)
Q Consensus 228 ~E~~~l~~l~----h~niv~l~~~~~~--~~~~lV~e~~~~gsL~~~--l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH 298 (455)
+|...+.+++ +.+.+.+-..+.+ ...+|||||+.|+++.+. +...+. ...+....+..++.|+ .
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------F 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------H
Confidence 5665555542 4444444343333 566899999999999774 222110 0112233333333333 3
Q ss_pred cCCCCeEecCCCCCcEEECCCC----ceEEccccccccccC
Q psy520 299 SLSKPIIHRDVKSANVLLDENF----VPKLGDFGIVKMSET 335 (455)
Q Consensus 299 ~~~~~iiH~Dikp~NILl~~~~----~~kl~DFGla~~~~~ 335 (455)
+ .|++|+|+||.||+++.++ .++++|||++.....
T Consensus 278 ~--~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 R--DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred h--CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4 6899999999999999888 999999999876543
No 445
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.44 E-value=4.3e-13 Score=119.75 Aligned_cols=127 Identities=21% Similarity=0.231 Sum_probs=95.1
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceec-ccccccCccee
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLR-LLGFCNNIMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~~~ 254 (455)
+.|+.|.++.||+++.. +..|++|....... . ...+..|+.+++.+.+.++++ ++.+ .....+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~------------~~~~~~E~~~l~~l~~~~~~P~~~~~-~~~~~~ 67 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--L------------LINRENEAENSKLAAEAGIGPKLYYF-DPETGV 67 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc--c------------ccCHHHHHHHHHHHHHhCCCCceEEE-eCCCCe
Confidence 56899999999999986 78899999754321 0 112668899998886655554 4433 334458
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-----eEecCCCCCcEEECCCCceEEccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-----IIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~-----iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+||||++|.++.+. . . ....++.+++++|+.||+ .+ ++|||++|.||+++ ++.++++|||.
T Consensus 68 lv~e~i~G~~l~~~--~------~---~~~~~~~~l~~~l~~LH~--~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~ 133 (170)
T cd05151 68 LITEFIEGSELLTE--D------F---SDPENLEKIAKLLKKLHS--SPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEY 133 (170)
T ss_pred EEEEecCCCccccc--c------c---cCHHHHHHHHHHHHHHhC--CCCCCceeecCCCCcCcEEEE-CCeEEEEeccc
Confidence 99999999888643 0 1 113456789999999999 45 59999999999999 66899999998
Q ss_pred ccc
Q psy520 330 VKM 332 (455)
Q Consensus 330 a~~ 332 (455)
+..
T Consensus 134 a~~ 136 (170)
T cd05151 134 AGM 136 (170)
T ss_pred ccC
Confidence 764
No 446
>KOG0601|consensus
Probab=99.43 E-value=2.8e-13 Score=138.01 Aligned_cols=245 Identities=20% Similarity=0.191 Sum_probs=172.3
Q ss_pred Ccccc--cCCEEEEEEEE--c-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceeccccccc
Q psy520 176 NKLGE--GQFGTVYYGKL--K-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGFCN 249 (455)
Q Consensus 176 ~~LG~--G~fg~Vy~~~~--~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 249 (455)
..+|. |.+|.||.+.. . ++..+|+|+-+........ ...-.+|+...+.+ .|+|.++.+..+.
T Consensus 120 ~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~-----------~~~k~~~~~s~~~i~~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 120 SRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLD-----------SKRKLREFLSHHKIDSHENPVRDSPAWE 188 (524)
T ss_pred cccccCCCCCceeecccCCcccCCcccccccccCCCCCccc-----------cccccchhhcccccCccccccccCcccc
Confidence 67999 99999999987 3 4788999985433321111 11134566666666 4999999888777
Q ss_pred C-cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHH----HHHHHHcCCCCeEecCCCCCcEEECCC-CceE
Q psy520 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE----ALHYLHSLSKPIIHRDVKSANVLLDEN-FVPK 323 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----gL~~LH~~~~~iiH~Dikp~NILl~~~-~~~k 323 (455)
+ +..++-.|++ +.+|.++.+.. ...++....+.+..+... ||.++|+ .+++|-|+||+||+...+ ..++
T Consensus 189 ~~~~lfiqtE~~-~~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs--~~~~~~~~kp~~i~~~~~~~s~~ 263 (524)
T KOG0601|consen 189 GSGILFIQTELC-GESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHS--NNIVHDDLKPANIFTTSDWTSCK 263 (524)
T ss_pred cCCcceeeeccc-cchhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCC--Ccccccccchhheecccccceee
Confidence 7 5555555655 78888887653 234777888888888888 9999999 889999999999999999 8999
Q ss_pred EccccccccccCCCcccce--eccCCCCCCcCCcccccCCCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcc
Q psy520 324 LGDFGIVKMSETSNMKTMY--TENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 401 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 401 (455)
++|||++..+......... .....|...|++||+..+-++..+|+||+|.|+.+..+|..+........+.... ..
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r--~~ 341 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR--QG 341 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc--cc
Confidence 9999999877665432211 1233677889999999999999999999999999999987766543111000000 00
Q ss_pred cchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHH
Q psy520 402 VPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....++.+.. ...+..++.+++..+|..|++...+.+
T Consensus 342 ~ip~e~~~~~---------s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 342 YIPLEFCEGG---------SSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cCchhhhcCc---------chhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0001111111 112333588899999999998877653
No 447
>KOG1266|consensus
Probab=99.43 E-value=3.8e-13 Score=127.33 Aligned_cols=200 Identities=21% Similarity=0.275 Sum_probs=138.8
Q ss_pred HHHHcCCCcceecccccccC------cceeEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q psy520 231 QTLSQCKHVNLLRLLGFCNN------IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKP 303 (455)
Q Consensus 231 ~~l~~l~h~niv~l~~~~~~------~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gL~~LH~~~~~ 303 (455)
.-+-++.|.|||++..|+.+ ....++.|||..|+|..+|++..+ ...+......+|+.||+.||.|||+....
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 34556789999999998755 344789999999999999987554 56688888999999999999999998889
Q ss_pred eEecCCCCCcEEECCCCceEEccccccccccCC--CcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHc
Q psy520 304 IIHRDVKSANVLLDENFVPKLGDFGIVKMSETS--NMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT 380 (455)
Q Consensus 304 iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~--~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~ellt 380 (455)
|+|+++....|++..+|-+||+--.- ...... ......++...|-+.|.+||.= ....+.++|||+||...+||.-
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap-~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAP-DSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccCc-cccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 99999999999999999999853111 100000 0011222344567889999954 3456779999999999999988
Q ss_pred CCCCCCCCc-hhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHH
Q psy520 381 GMKPIDDNN-TILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 381 G~~p~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
|..--.+.. .......+...-..+..-+ -+.++.+|+...|+.||+|.+++
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~~len~l---------------qr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVIIGLENGL---------------QRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred heeccCCCcceeehhhhhhhheeeccCcc---------------ccCcCcccccCCCCCCcchhhhh
Confidence 754322221 1111111111000000001 12347899999999999998875
No 448
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.35 E-value=1.2e-11 Score=112.67 Aligned_cols=149 Identities=13% Similarity=0.168 Sum_probs=101.1
Q ss_pred CcccccCCEEEEEEEEcC-------CcEEEEEEeecccCcCCCCcc----hhH-----hhhhhHHHHH----HHHHHHHc
Q psy520 176 NKLGEGQFGTVYYGKLKN-------GMEIAVKTLENNANYSSSNSD----NTE-----AAMIPILLFE----NEVQTLSQ 235 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~----~E~~~l~~ 235 (455)
..||.|-=+.||.|...+ +..+|||+.+.....-..... +.. ........+. +|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999997542 479999998754321100000 000 0011123333 89999999
Q ss_pred CCC--cceecccccccCcceeEEEEeccCCCHHH-HHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCeEecCCCC
Q psy520 236 CKH--VNLLRLLGFCNNIMNCIVYEYMCNGSLYD-RLARVNNTPPLDSNKRYSIALGVAEALHYL-HSLSKPIIHRDVKS 311 (455)
Q Consensus 236 l~h--~niv~l~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~gL~~L-H~~~~~iiH~Dikp 311 (455)
+.. -++...+.+ ...+|||||+.++.+.. .+.. ..++..+...+..+++.++..| |+ .|+|||||++
T Consensus 83 l~~~Gv~vP~pi~~---~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~--~glVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL---KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKE--CNLVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe---cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHh--CCeecCCCCH
Confidence 853 344445543 56689999997654432 2222 2355566778889999999998 88 7899999999
Q ss_pred CcEEECCCCceEEcccccccccc
Q psy520 312 ANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 312 ~NILl~~~~~~kl~DFGla~~~~ 334 (455)
.|||++ ++.+.|+|||.+....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999876543
No 449
>cd08781 Death_UNC5-like Death domain found in Uncoordinated-5 homolog family. Death Domain (DD) found in Uncoordinated-5 (UNC-5) homolog family, which includes Unc5A, B, C and D in vertebrates. UNC5 proteins are receptors for secreted netrins (netrin-1, -3 and -4) that are involved in diverse processes like axonal guidance, neuronal migration, blood vessel patterning, and apoptosis. They are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit
Probab=99.27 E-value=1.3e-11 Score=96.12 Aligned_cols=78 Identities=22% Similarity=0.377 Sum_probs=67.2
Q ss_pred cCHHHHHHhhhhcCCc----chHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCc
Q psy520 16 LKQYVVHELGIILNER----DDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~~----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
||++++++||.+||+. ++|+.+|..+.-+ ..|+.++ .+.|||+.||+.|++++..++|
T Consensus 1 lp~~~r~~Lc~~LD~~~~~g~dWr~LA~~Lgl~-----------~~i~~~~-------~~~SPT~~LL~~We~~~~~~~t 62 (83)
T cd08781 1 LPYSIRQKLCSSLDPPNPRGNDWRLLAKKLSVD-----------RYLNYFA-------TKPSPTGVILDLWEARHRDDGA 62 (83)
T ss_pred CCHHHHHHHHHHcCCCCCCCCCHHHHHHHhCcH-----------HHHHHHc-------CCCChHHHHHHHHHhcCCCcch
Confidence 7999999999999987 7999999997732 2456665 4789999999999988777899
Q ss_pred HHHHHHHHHhcchhhhhhhh
Q psy520 92 LSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~~~~~ 111 (455)
|++|+++|.+.....|+.++
T Consensus 63 v~~L~~~L~~mgr~da~~ll 82 (83)
T cd08781 63 LNDLAQILEEMGRTDAVNLL 82 (83)
T ss_pred HHHHHHHHHHcCcHHHHHHh
Confidence 99999999999998888754
No 450
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.26 E-value=5.1e-11 Score=110.84 Aligned_cols=142 Identities=23% Similarity=0.321 Sum_probs=107.6
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCc--ceecccccccC---
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV--NLLRLLGFCNN--- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~--- 250 (455)
+.||.|.++.||+++..+|..+++|......... ....+.+|.++++.+++. ++.+++.+..+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~------------~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~ 71 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLP------------SAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV 71 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCc------------ccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc
Confidence 5689999999999998766899999975433210 023378899999998753 45666776554
Q ss_pred -cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-----------------------------
Q psy520 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL----------------------------- 300 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~----------------------------- 300 (455)
+..++||||++|.++.+.+.. ..++..+...++.+++++|..||+.
T Consensus 72 ~~~~~~v~e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (223)
T cd05154 72 LGTPFYVMERVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYD 147 (223)
T ss_pred cCCceEEEEEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHH
Confidence 256899999999988775432 2467777888888888888888852
Q ss_pred -------------------------CCCeEecCCCCCcEEECC--CCceEEccccccccc
Q psy520 301 -------------------------SKPIIHRDVKSANVLLDE--NFVPKLGDFGIVKMS 333 (455)
Q Consensus 301 -------------------------~~~iiH~Dikp~NILl~~--~~~~kl~DFGla~~~ 333 (455)
...++|||++|.||+++. ++.+.|+||+.+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 148 ASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred hhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 134799999999999998 677899999987643
No 451
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.23 E-value=3.8e-10 Score=110.63 Aligned_cols=256 Identities=16% Similarity=0.123 Sum_probs=162.8
Q ss_pred CCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceec--------c
Q psy520 174 RGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR--------L 244 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~--------l 244 (455)
.++.||+|+-+.+|..--- +. .+-|+.+....- . -.+-+..|... .||-+-. +
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa---------------~-~aqk~a~la~~p~~p~~~~rvaWPqa~L 76 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPA---------------A-QAQKVAELAATPDAPLLNYRVAWPQATL 76 (637)
T ss_pred CCccccCCccceeeecchh-hc-hhheeecCCCch---------------H-HHHHHHHhccCCCCcchhhhhcccHHHh
Confidence 4578999999999965321 22 344777543220 0 11122223333 4554333 2
Q ss_pred cccccCcceeEEEEeccCCC-HHHHH---hhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 245 LGFCNNIMNCIVYEYMCNGS-LYDRL---ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 245 ~~~~~~~~~~lV~e~~~~gs-L~~~l---~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+|--......+.|+.++|.. ..+++ .+..+.+...|.-.++.+..++.+.+-||. .|.+-||++++|+|+++++
T Consensus 77 ~G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~--~Gh~vGDVn~~~~lVsd~~ 154 (637)
T COG4248 77 HGGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE--HGHVVGDVNQNSFLVSDDS 154 (637)
T ss_pred hCCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh--cCCcccccCccceeeecCc
Confidence 22111123567888887652 22222 222335678999999999999999999999 8899999999999999999
Q ss_pred ceEEccccccccccCCCcccceeccCCCCCCcCCccccc-C-----CCCChhhHHHHHHHHHHHHcC-CCCCCCCc----
Q psy520 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-C-----QISTKTDVFSYGVILLELLTG-MKPIDDNN---- 389 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~-----~~s~~sDi~SlGvvl~elltG-~~p~~~~~---- 389 (455)
.+.|.|-........ .......+|.+.|++||.-+ + ..+..+|-|.+|++++++|.| ++||.+.-
T Consensus 155 ~V~LVdsDsfqi~~n----g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ 230 (637)
T COG4248 155 KVVLVDSDSFQINAN----GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD 230 (637)
T ss_pred eEEEEcccceeeccC----CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC
Confidence 999998543332211 12234568999999999553 2 346789999999999999986 99998643
Q ss_pred ---hhhHHHHHHh--cccchhhhcchhhcCCChhHHHHHHHHHHHHhcccC--cCCCCCHHHHHHHHHhhh
Q psy520 390 ---TILYYYLVVE--QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFE--KDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 390 ---~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~d--p~~RPs~~evl~~L~~~~ 453 (455)
.......... ....-..-..+..+.|+-.-.+..++.|+.+|+... +.-||+++.++..|..+.
T Consensus 231 ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 231 APNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred CCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 1110000000 000001112222355666666777888888999877 678999999888776553
No 452
>KOG3087|consensus
Probab=99.20 E-value=2.6e-10 Score=100.46 Aligned_cols=151 Identities=19% Similarity=0.238 Sum_probs=108.4
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-ccee
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
..|-+|+-+.|+++.+. |+...||.-..+.- ....-.......+-.+|.+.|.+|+--.|.--.=++.+ ...+
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~Y-----RHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~ 86 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRY-----RHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQ 86 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccc-----cchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCe
Confidence 68999999999999997 78888886433221 12222234456677899999999865444332223334 6678
Q ss_pred EEEEeccC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC---ceEEcccccc
Q psy520 255 IVYEYMCN-GSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF---VPKLGDFGIV 330 (455)
Q Consensus 255 lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~---~~kl~DFGla 330 (455)
|+|||.+| .++.+++...... +........++..+-+.+.-||. .++|||||..+||++..++ .+.++|||++
T Consensus 87 i~ME~~~g~~~vk~~i~~~~~~-~~~d~~~~~~~~~iG~~igklH~--ndiiHGDLTTSNill~~~~~~~~~~lIdfgls 163 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTMED-ESEDEGLAELARRIGELIGKLHD--NDIIHGDLTTSNILLRSDGNQITPILIDFGLS 163 (229)
T ss_pred EEEEeccchhHHHHHHHHHccC-cccchhHHHHHHHHHHHHHHhhh--CCeecccccccceEEecCCCcCceEEEeecch
Confidence 99999976 3788888765442 22333337888999999999999 7899999999999996554 4589999998
Q ss_pred ccccC
Q psy520 331 KMSET 335 (455)
Q Consensus 331 ~~~~~ 335 (455)
.....
T Consensus 164 ~~s~~ 168 (229)
T KOG3087|consen 164 SVSRL 168 (229)
T ss_pred hcccC
Confidence 76543
No 453
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=3.4e-10 Score=100.16 Aligned_cols=140 Identities=20% Similarity=0.267 Sum_probs=100.0
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-ccee
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
..+++|+=+.+|.+.+. |.++++|.- ...... ...-........-.+|..++.+++--.|..-+=|..+ ....
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~R-i~K~YR----~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~ 75 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKER-IPKRYR----HPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGL 75 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEee-cCcccC----ChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCE
Confidence 46899999999999886 556666653 322222 2222233445667789999998864433222222233 5557
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccccc
Q psy520 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
|+|||.+|-.|.+.+... ...++..+-.-+.-||. .||+||||.++||++...+ +.++||||+.+..
T Consensus 76 I~me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~--~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 76 IVMEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHK--AGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred EEEEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHh--cCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 999999999999888863 24567777778888999 8899999999999998775 9999999987543
No 454
>KOG1243|consensus
Probab=99.14 E-value=6.4e-10 Score=114.90 Aligned_cols=167 Identities=22% Similarity=0.277 Sum_probs=121.5
Q ss_pred EEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccccC-cceeEEEEeccCCCHH
Q psy520 189 GKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCNN-IMNCIVYEYMCNGSLY 266 (455)
Q Consensus 189 ~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~ 266 (455)
|..+ ++.+|.|...+.... . ......+-++.|+.++||||++++..... +..|||.|-+ ..|.
T Consensus 31 ~t~k~~~~~vsVF~~~~~~~------~-------~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~ 95 (690)
T KOG1243|consen 31 GTRKADGGPVSVFVYKRSNG------E-------VTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLE 95 (690)
T ss_pred cceeccCCceEEEEEeCCCc------h-------hhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHH
Confidence 4443 478899988864322 0 02335678899999999999999997766 8889999988 4677
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCcccceeccC
Q psy520 267 DRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 346 (455)
Q Consensus 267 ~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 346 (455)
.++.. +......--+.||+.||.|||.. .+++|++|.-+.|+++..|..||++|-++......... ....
T Consensus 96 ~~lk~------l~~~~v~~Gl~qIl~AL~FL~~d-~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~---~~~~ 165 (690)
T KOG1243|consen 96 TVLKE------LGKEEVCLGLFQILAALSFLNDD-CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP---AKSL 165 (690)
T ss_pred HHHHH------hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc---cccc
Confidence 77776 34566777789999999999853 68999999999999999999999999887654332210 0001
Q ss_pred CCCCCcCCcccccCCCCChhhHHHHHHHHHHHHcC
Q psy520 347 TGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTG 381 (455)
Q Consensus 347 ~gt~~Y~aPE~~~~~~s~~sDi~SlGvvl~elltG 381 (455)
.---.|..|+... .-.-..|.|-|||+++|++.|
T Consensus 166 ~~~~s~~~P~~~~-~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 166 YLIESFDDPEEID-PSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhhhcccChhhcC-ccccchhhhhHHHHHHHHhCc
Confidence 1111255555431 111356999999999999999
No 455
>KOG0606|consensus
Probab=99.12 E-value=4.1e-11 Score=128.54 Aligned_cols=247 Identities=18% Similarity=0.204 Sum_probs=161.9
Q ss_pred cCCCcccccCCEEEEEEEEcC-CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceecccccc-cC
Q psy520 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFC-NN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~ 250 (455)
.+.+-+-.|+||.++...-.. |...++|............ .+....+-.++-..+||-++...--+ ..
T Consensus 807 ~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~----------~~s~r~~s~~~i~p~~P~v~~~~~s~~~r 876 (1205)
T KOG0606|consen 807 EITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTND----------YESIRSKSNILITPRSPAVVRSFPSFPCR 876 (1205)
T ss_pred eecccccCCCCcccccCCccccccccchhhhccchhhcccc----------ccccCCccCccccCCCCceecccCCCCCC
Confidence 344678899999998876432 4445555543322111100 01111222233334556666544332 33
Q ss_pred cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
....||++|+.+++|...|+. .++.+..........+..++.+||. ..+.|+|++|.|+|...+|..++.|||..
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~---~~~~saepaRs~i~~~vqs~e~L~s--~~r~h~~~~p~~~l~~~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHN---SGCLSAEPARSPILERVQSLESLHS--SLRKHRDLKPDSLLIAYDGHRPLTDFGTL 951 (1205)
T ss_pred CCcchhhHHhccCCchhhhhc---CCCcccccccchhHHHHhhhhcccc--chhhcccccccchhhcccCCcccCccccc
Confidence 667899999999999999887 3457777777788889999999999 66999999999999999999999999843
Q ss_pred ccccCC---------------------Cc-cc------ceeccCCCCCCcCCcccccC-CCCChhhHHHHHHHHHHHHcC
Q psy520 331 KMSETS---------------------NM-KT------MYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTG 381 (455)
Q Consensus 331 ~~~~~~---------------------~~-~~------~~~~~~~gt~~Y~aPE~~~~-~~s~~sDi~SlGvvl~elltG 381 (455)
...... .. .. ...-...||+.|.+||.+.+ .....+|+|++|++++|.++|
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence 221100 00 00 00123578999999996644 567889999999999999999
Q ss_pred CCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHH
Q psy520 382 MKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 382 ~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
.+||...........+.....+.+ ..+...+...++++...+..++.+|-.+.
T Consensus 1032 ~pp~na~tpq~~f~ni~~~~~~~p---------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1032 IPPFNAETPQQIFENILNRDIPWP---------EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCCcchhhhhhccccCCCCCC---------CCccccChhhhhhhhhhhccCchhccCcc
Confidence 999988764433322222111111 11223344567778888888888887664
No 456
>cd08783 Death_MALT1 Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1. Death domain (DD) similar to that found in Malt1 (mucosa-associated lymphoid tissue-lymphoma-translocation gene 1). Malt1, together with Bcl10 (B-cell lymphoma 10), are the integral components of the CBM signalosome. They associate with CARD9 to form M-CBM (CBM complex in myeloid immune cells) and with CARMA1 to form L-CBM (CBM complex in lymphoid immune cells), to mediate activation of NF-kB and MAPK by ITAM-coupled receptors expressed on immune cells. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins
Probab=99.11 E-value=3.8e-10 Score=87.03 Aligned_cols=91 Identities=18% Similarity=0.280 Sum_probs=76.1
Q ss_pred eecCHHHHHHhhhhcCCc---chHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCC
Q psy520 14 RHLKQYVVHELGIILNER---DDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRP 90 (455)
Q Consensus 14 ~~l~~~~~~~l~~~ld~~---~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~ 90 (455)
-.|+-.++++||.+||.. -+|+++|..+-.+ ..| |++..++..|--..-- +|.|||..||+.|+.+ ++
T Consensus 2 ~~L~e~~l~~L~~lLD~~~~~~gWr~LAe~lg~~--~~f--r~S~~el~~cslkvl~--p~gSPsk~LL~~~~~r---g~ 72 (97)
T cd08783 2 NRLREPLLRRLSELLDRAADGKGWRKLAELAGSR--GRF--RLSCLDLEQCSLKVLE--PEGSPSRSLLKLLGER---GC 72 (97)
T ss_pred CcccHHHHHHHHHHHhCCCccCCHHHHHHHHccC--Ccc--ccCHHHHHHHHHHHhc--CCCCchHHHHHHHHHc---CC
Confidence 458889999999999975 6899999998754 233 7788899666433332 8999999999999998 89
Q ss_pred cHHHHHHHHHhcchhhhhhhhcc
Q psy520 91 RLSDLIMFLKKAELHQAARYVEV 113 (455)
Q Consensus 91 ~~~~l~~~l~~~~l~~~~~~~~~ 113 (455)
||.+|+++|......+|.+++.+
T Consensus 73 Tv~~Ll~~L~~Mgh~eAl~lL~~ 95 (97)
T cd08783 73 TVTELSEFLQAMEHTEALQLLSP 95 (97)
T ss_pred cHHHHHHHHHHhhhHHHHHHhcC
Confidence 99999999999999999987653
No 457
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.08 E-value=1.1e-09 Score=99.28 Aligned_cols=139 Identities=22% Similarity=0.246 Sum_probs=87.1
Q ss_pred EEEEEEEcCCcEEEEEEeecccCcC----------CCCc---chhHhhhhhHHHHHHHHHHHHcCCCc--ceeccccccc
Q psy520 185 TVYYGKLKNGMEIAVKTLENNANYS----------SSNS---DNTEAAMIPILLFENEVQTLSQCKHV--NLLRLLGFCN 249 (455)
Q Consensus 185 ~Vy~~~~~~~~~vAvK~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 249 (455)
.||.|...+|..+|||..+.....- .... ..............+|.+.|.++..- ++.+++.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4899998888999999987642111 0000 00111223345678899999999765 45555544
Q ss_pred CcceeEEEEecc--CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH-HHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 250 NIMNCIVYEYMC--NGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY-LHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 250 ~~~~~lV~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~-LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
...+|||||+. |..+.. +... .++......++.+++..+.. +|+ .|++||||.+.|||++++ .+.|+|
T Consensus 79 -~~~~ivME~I~~~G~~~~~-l~~~----~~~~~~~~~~~~~il~~~~~~~~~--~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 79 -NRNVIVMEYIGEDGVPLPR-LKDV----DLSPEEPKELLEEILEEIIKMLHK--AGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp -ETTEEEEE--EETTEEGGC-HHHC----GGGGSTHHHHHHHHHHHHHHHHHC--TTEEESS-STTSEEEETT-CEEE--
T ss_pred -eCCEEEEEecCCCccchhh-HHhc----cccchhHHHHHHHHHHHHHHHHHh--cCceecCCChhhEEeecc-eEEEEe
Confidence 35589999998 555544 3331 12244566778888886555 578 789999999999999988 999999
Q ss_pred cccccccc
Q psy520 327 FGIVKMSE 334 (455)
Q Consensus 327 FGla~~~~ 334 (455)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99876544
No 458
>KOG0601|consensus
Probab=99.05 E-value=1.7e-10 Score=117.92 Aligned_cols=236 Identities=22% Similarity=0.279 Sum_probs=160.0
Q ss_pred CcccccCCEEEEEEEEc--CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcC-CCcceecccc-cccCc
Q psy520 176 NKLGEGQFGTVYYGKLK--NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG-FCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~ 251 (455)
..||.|.|+.|+....+ ++..|++|-+.+....... ...-..|+.+...+ .|.+++..+. |....
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~-----------di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFAS-----------DIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccchHh-----------hhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 89999999999988744 4788999988654332211 11134566666666 4778888766 44447
Q ss_pred ceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC-CceEEcccccc
Q psy520 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKLGDFGIV 330 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla 330 (455)
..++=-|||.++++...+.. ...+....++++..+++.++.++|+ ..++|+|+||+||++..+ +..+++|||..
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s--~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHS--KLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccc--hhhhcccccccceeeccchhhhhccccccc
Confidence 77788999999999887754 3457888899999999999999999 889999999999999876 88999999987
Q ss_pred ccccCCCcccceeccCCCCCCcC-Ccc-cccC-CCCChhhHHHHHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhh
Q psy520 331 KMSETSNMKTMYTENLTGTRPYM-PPE-AMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~-aPE-~~~~-~~s~~sDi~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
....... ....+...+. .+| +... ....+.|+||||..+.|.++|...-....... .+..+..+
T Consensus 415 t~~~~~~------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---~i~~~~~p---- 481 (524)
T KOG0601|consen 415 TRLAFSS------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---TIRSGDTP---- 481 (524)
T ss_pred cccceec------ccccccccccccchhhccccccccccccccccccccccccCcccCcccccce---eeeccccc----
Confidence 6422211 1112233344 245 4432 35679999999999999999864432211110 00000000
Q ss_pred cchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
........+..+...+...++..||.+.++...
T Consensus 482 --------~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 482 --------NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred --------CCCchHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 001111345556777888889999998876543
No 459
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.02 E-value=2.5e-09 Score=100.17 Aligned_cols=148 Identities=21% Similarity=0.214 Sum_probs=103.3
Q ss_pred CcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchh--------Hhh-hhhHHHHHHHHHHHHcCCCc--c
Q psy520 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNT--------EAA-MIPILLFENEVQTLSQCKHV--N 240 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~E~~~l~~l~h~--n 240 (455)
..++.+||.|-=|.||.|....|.++|||.-+....+-....... ..+ ...+....+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 356689999999999999998899999998654432111100000 011 23456678999999999654 5
Q ss_pred eecccccccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCC
Q psy520 241 LLRLLGFCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 241 iv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
|.+.+++ +..++||||..|-.|... +++....-.|+..|+.-+.-+-+ .|+||||+.+-||+++++|
T Consensus 173 VP~P~~~---nRHaVvMe~ieG~eL~~~--------r~~~en~~~il~~il~~~~~~~~--~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW---NRHAVVMEYIEGVELYRL--------RLDVENPDEILDKILEEVRKAYR--RGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc---ccceeeeehcccceeecc--------cCcccCHHHHHHHHHHHHHHHHH--cCccccCCchheEEEecCC
Confidence 5555543 667899999988666432 12233444555556665555445 7899999999999999999
Q ss_pred ceEEcccccccc
Q psy520 321 VPKLGDFGIVKM 332 (455)
Q Consensus 321 ~~kl~DFGla~~ 332 (455)
.+.++||.-+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999986553
No 460
>KOG3741|consensus
Probab=98.98 E-value=3.4e-08 Score=99.50 Aligned_cols=167 Identities=19% Similarity=0.284 Sum_probs=125.1
Q ss_pred CEEEEEEEEc-CCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceeccccccc-----CcceeEE
Q psy520 183 FGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGFCN-----NIMNCIV 256 (455)
Q Consensus 183 fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----~~~~~lV 256 (455)
-.+.|++..+ +|..|++|+++........+ -..-+++++++.|+|||++.+.+. +...+||
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk-------------~t~lve~wkkl~h~NvV~frevf~t~tF~D~Slvlv 355 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNK-------------DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLV 355 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCccc-------------chHHHHHHHHhccCceeehhhhhhhhccCcceEEEE
Confidence 3567999876 59999999996555544332 224578899999999999987543 3577899
Q ss_pred EEeccC-CCHHHHHhhc------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceE
Q psy520 257 YEYMCN-GSLYDRLARV------------NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 257 ~e~~~~-gsL~~~l~~~------------~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
|+|+++ ++|.++-... ..+...++...|.++.|+..||.++|+ .|+.-+-|.|.+||++.+-.++
T Consensus 356 YDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs--sGLAck~L~~~kIlv~G~~RIr 433 (655)
T KOG3741|consen 356 YDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS--SGLACKTLDLKKILVTGKMRIR 433 (655)
T ss_pred EecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh--cCceeecccHhHeEeeCcceEE
Confidence 999987 5787765321 113457789999999999999999999 8899999999999999998999
Q ss_pred EccccccccccCCCcccceeccCCCCCCcCCcccccCCCCChhhHHHHHHHHHHHHcCCC
Q psy520 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMK 383 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~s~~sDi~SlGvvl~elltG~~ 383 (455)
|+..|.......+.. |-+ .--.+-|.=.||.+++.|.||..
T Consensus 434 iS~C~i~Dvl~~d~~-----------------~~l--e~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 434 ISGCGIMDVLQEDPT-----------------EPL--ESQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred EecccceeeecCCCC-----------------cch--hHHhhhhHHHHHHHHHHHhhccc
Confidence 987776554433220 001 11235688899999999999953
No 461
>cd08782 Death_DAPK1 Death domain found in death-associated protein kinase 1. Death domain (DD) found in death-associated protein kinase 1 (DAPK1). DAPK1 is composed of several functional domains, including a kinase domain, a CaM regulatory domain, ankyrin repeats, a cytoskeletal binding domain and a C-terminal DD. It plays important roles in a diverse range of signal transduction pathways including apoptosis, growth factor signalling, and autophagy. Loss of DAPK1 expression, usually because of DNA methylation, is implicated in many tumor types. DAPK1 is highly abundant in the brain and has also been associated with neurodegeneration. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as ad
Probab=98.97 E-value=1.7e-09 Score=83.85 Aligned_cols=76 Identities=21% Similarity=0.298 Sum_probs=59.6
Q ss_pred HHHHhhhhcCCcc----hHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCcHHHH
Q psy520 20 VVHELGIILNERD----DWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDL 95 (455)
Q Consensus 20 ~~~~l~~~ld~~~----~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l 95 (455)
++++||.+|||.+ +|+.+|..+--. -.. ..++...+ +|.|||+.||+.|++++ .+||+.|
T Consensus 2 ~R~~L~~lLdpp~~~g~DW~~LA~~Lg~~----------~~~-~~~~~~~~---~~~sPT~~LL~~W~~~~--~~tvg~L 65 (82)
T cd08782 2 TRRKLSRLLDPPDPMGRDWCLLAVNLGLT----------DLV-PQLDTNSS---SLPSPTDALLQEWATAP--PSTIGTL 65 (82)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHcCCh----------hhH-HHHHhcCC---CCCCcHHHHHHHHhcCC--cccHHHH
Confidence 6899999999976 999999998732 122 33332323 47999999999999983 3999999
Q ss_pred HHHHHhcchhhhhhhh
Q psy520 96 IMFLKKAELHQAARYV 111 (455)
Q Consensus 96 ~~~l~~~~l~~~~~~~ 111 (455)
+++|.+.....+++++
T Consensus 66 ~~~L~~~gR~Da~~~l 81 (82)
T cd08782 66 IDKLRELGREDAADVL 81 (82)
T ss_pred HHHHHHcCcHHHHHHh
Confidence 9999999988777643
No 462
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.94 E-value=1.1e-08 Score=98.12 Aligned_cols=150 Identities=19% Similarity=0.143 Sum_probs=100.0
Q ss_pred cccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcce--eccccccc-----
Q psy520 177 KLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL--LRLLGFCN----- 249 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~----- 249 (455)
.+-+.....|+++.+. |+.|.||.............-- ....+...+.+|...+.+|...+| ...+++..
T Consensus 29 ~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~--~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 29 VFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLL--SLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred EEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhc--ccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 3443444457787775 7899999774332100000000 000112347889998888843333 23333332
Q ss_pred -CcceeEEEEeccCC-CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC-------CC
Q psy520 250 -NIMNCIVYEYMCNG-SLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-------NF 320 (455)
Q Consensus 250 -~~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~-------~~ 320 (455)
....+||+|++++. +|.+++.... ..+.+...+..++.+++..+.-||. .||+|||+++.|||++. ++
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~--~Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHA--AGINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHH--CcCccCCCChhhEEEeccccCCCCCc
Confidence 12467999999886 8999886432 2345677788999999999999999 89999999999999975 46
Q ss_pred ceEEcccccccc
Q psy520 321 VPKLGDFGIVKM 332 (455)
Q Consensus 321 ~~kl~DFGla~~ 332 (455)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 899999998753
No 463
>cd08312 Death_MyD88 Death domain of Myeloid Differentation primary response protein MyD88. Death Domain (DD) of Myeloid Differentiation primary response protein 88 (MyD88). MyD88 is an adaptor protein involved in interleukin-1 receptor (IL-1R)- and Toll-like receptor (TLR)-induced activation of nuclear factor-kappaB (NF-kB) and mitogen activated protein kinase pathways that lead to the induction of proinflammatory cytokines. It is a key component in the signaling pathway of pathogen recognition in the innate immune system. MyD88 contains an N-terminal DD and a C-terminal Toll/IL-1 Receptor (TIR) homology domain that mediates interaction with TLRs and IL-1R. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and
Probab=98.93 E-value=3.1e-09 Score=82.05 Aligned_cols=70 Identities=23% Similarity=0.436 Sum_probs=59.8
Q ss_pred HHHHhhhhcCCc----chHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCcHHHH
Q psy520 20 VVHELGIILNER----DDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDL 95 (455)
Q Consensus 20 ~~~~l~~~ld~~----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l 95 (455)
++++||.+||+. ++|+.+|..+ .|+..+|+.|| ...|||+.||..|++++. .+||+.|
T Consensus 1 ~R~~L~~~Ldp~~~~g~DWr~LA~~L----------g~~~~~I~~f~-------~~~sPt~~lL~~W~~r~~-~atv~~L 62 (79)
T cd08312 1 VRRRLSLFLNPPRVVAADWTALAEEM----------GFEYLEIRNFE-------TKPSPTEKVLEDWETRPD-GATVGNL 62 (79)
T ss_pred CHHHHHHHcCCCCCcccCHHHHHHHc----------CCCHHHHHHHc-------cCCChHHHHHHHHHhcCC-CCcHHHH
Confidence 579999999996 7999999985 46788999998 356999999999999855 6999999
Q ss_pred HHHHHhcchhhh
Q psy520 96 IMFLKKAELHQA 107 (455)
Q Consensus 96 ~~~l~~~~l~~~ 107 (455)
+++|.+.+..-+
T Consensus 63 ~~~L~~~~R~Dv 74 (79)
T cd08312 63 LELLEKLERRDV 74 (79)
T ss_pred HHHHHHcChHHH
Confidence 999998775433
No 464
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.75 E-value=9.8e-08 Score=88.35 Aligned_cols=107 Identities=19% Similarity=0.238 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHcCCCc--ceecccccccC-----cceeEEEEeccCC-CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q psy520 223 ILLFENEVQTLSQCKHV--NLLRLLGFCNN-----IMNCIVYEYMCNG-SLYDRLARVNNTPPLDSNKRYSIALGVAEAL 294 (455)
Q Consensus 223 ~~~~~~E~~~l~~l~h~--niv~l~~~~~~-----~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL 294 (455)
.....+|...+.+|..- .+.+.+++... ...+||+|++++. +|.+.+..... ++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence 34577888887777432 23334444322 2347899999885 89998886332 66778889999999999
Q ss_pred HHHHcCCCCeEecCCCCCcEEECCCC---ceEEcccccccccc
Q psy520 295 HYLHSLSKPIIHRDVKSANVLLDENF---VPKLGDFGIVKMSE 334 (455)
Q Consensus 295 ~~LH~~~~~iiH~Dikp~NILl~~~~---~~kl~DFGla~~~~ 334 (455)
.-||+ .||+|+|+++.|||++.++ .+.++||+.++...
T Consensus 132 ~~lH~--~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 132 AKLHD--AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHH--CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999 8999999999999999887 89999999877543
No 465
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.73 E-value=5.1e-08 Score=101.27 Aligned_cols=163 Identities=20% Similarity=0.197 Sum_probs=101.1
Q ss_pred HHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCC---------------------cc---
Q psy520 159 LERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSN---------------------SD--- 214 (455)
Q Consensus 159 l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~---------------------~~--- 214 (455)
+......|++ .-|+.++-|.||+|++++|+.||||+.+......-.. .+
T Consensus 121 iee~F~eF~~-------~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~ 193 (517)
T COG0661 121 IEELFSEFEP-------EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVE 193 (517)
T ss_pred HHHHHHHcCC-------CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHH
Confidence 4455667776 4699999999999999999999999987653211000 00
Q ss_pred ---hhHhhhhhHHHHHHHHHHHHcCC----CcceecccccccC--cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHH
Q psy520 215 ---NTEAAMIPILLFENEVQTLSQCK----HVNLLRLLGFCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 285 (455)
Q Consensus 215 ---~~~~~~~~~~~~~~E~~~l~~l~----h~niv~l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~ 285 (455)
+..........|.+|...+.+++ ...-+.+-..+.+ ....|+|||+.|-.+.+...-.. ..++ +..
T Consensus 194 vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d---~k~ 268 (517)
T COG0661 194 VVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGID---RKE 268 (517)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCC---HHH
Confidence 00001111223445555555442 2222233333322 56689999999999988743222 1234 223
Q ss_pred HHHHHHHH-HHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccC
Q psy520 286 IALGVAEA-LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 286 i~~~i~~g-L~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
++..++++ +..+=. .|++|.|.+|.||+++.+|.+.+.|||+......
T Consensus 269 ia~~~~~~f~~q~~~--dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 269 LAELLVRAFLRQLLR--DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHHHHHHHh--cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 33333333 222222 5799999999999999999999999999876554
No 466
>KOG2137|consensus
Probab=98.72 E-value=3.9e-09 Score=109.60 Aligned_cols=150 Identities=17% Similarity=0.251 Sum_probs=100.8
Q ss_pred HHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEccccccccccCCCcc------cceeccCCCCCCcCCcccccC-C
Q psy520 289 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK------TMYTENLTGTRPYMPPEAMHC-Q 361 (455)
Q Consensus 289 ~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~------~~~~~~~~gt~~Y~aPE~~~~-~ 361 (455)
+++.|+.|+|+. .++||++|.|++|.++.++..||+.|+.+......... ........-...|.|||++.+ .
T Consensus 107 ~v~dgl~flh~s-Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRS-AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred cccchhhhhccC-cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 444999999985 57999999999999999999999999987654432111 111112234567999997755 4
Q ss_pred CCChhhHHHHHHHHHHHHc-CCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCC
Q psy520 362 ISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 362 ~s~~sDi~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
.+.++|+||+||++|.+.. |+.-+...+....+.... .... .........++..+++=+.+++..+...||
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~-~~~~-------~~~~~~s~~~p~el~~~l~k~l~~~~~~rp 257 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR-NLLN-------AGAFGYSNNLPSELRESLKKLLNGDSAVRP 257 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh-cccc-------cccccccccCcHHHHHHHHHHhcCCcccCc
Confidence 5779999999999999994 555555544332222111 1111 000111134556677778899999999999
Q ss_pred CHHHHHH
Q psy520 441 SMRDIVD 447 (455)
Q Consensus 441 s~~evl~ 447 (455)
++.++..
T Consensus 258 ~~~~l~~ 264 (700)
T KOG2137|consen 258 TLDLLLS 264 (700)
T ss_pred chhhhhc
Confidence 8877643
No 467
>PRK09902 hypothetical protein; Provisional
Probab=98.69 E-value=3e-07 Score=84.28 Aligned_cols=143 Identities=16% Similarity=0.120 Sum_probs=103.1
Q ss_pred ccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcc--eeccccccc---C--
Q psy520 178 LGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN--LLRLLGFCN---N-- 250 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~---~-- 250 (455)
-|+||-+.|++.... |+.+=+|+-......+-.. ......|.+|+..+.++...+ +.++. ++. .
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~-------P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~ 96 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRY-------PFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEG 96 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccC-------CCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCC
Confidence 377899999998876 5678889875222211110 112456999999999985432 33333 332 1
Q ss_pred -cceeEEEEeccC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCc--eEEcc
Q psy520 251 -IMNCIVYEYMCN-GSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV--PKLGD 326 (455)
Q Consensus 251 -~~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~--~kl~D 326 (455)
-..+||.|-+.| -||.+++.... ..+.+...+..++.+++..+.-||+ .|+.|+|+.+.||+++.++. ++++|
T Consensus 97 ~~rA~LVTe~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~--~Gv~Hgdly~khIll~~~g~~~v~lID 173 (216)
T PRK09902 97 EWRALLVTEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHS--VNRQHGCCYVRHIYVKTEGKAEAGFLD 173 (216)
T ss_pred ceEEEEEEEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHH--CCCcCCCCCHhheeecCCCCeeEEEEE
Confidence 234789997754 58988886532 2356888889999999999999999 89999999999999986666 99999
Q ss_pred cccccc
Q psy520 327 FGIVKM 332 (455)
Q Consensus 327 FGla~~ 332 (455)
|--++.
T Consensus 174 lEk~r~ 179 (216)
T PRK09902 174 LEKSRR 179 (216)
T ss_pred hhccch
Confidence 986654
No 468
>cd08799 Death_UNC5C Death domain found in Uncoordinated-5C. Death Domain (DD) found in Uncoordinated-5C (UNC5C). UNC5C is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5C plays a critical role in the development of spinal accesory motor neurons. Methylation of the UNC5C gene is associated with early stages of colorectal carcinogenesis. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN.
Probab=98.67 E-value=9.1e-08 Score=73.87 Aligned_cols=74 Identities=19% Similarity=0.337 Sum_probs=60.1
Q ss_pred cCHHHHHHhhhhcCC----cchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCc
Q psy520 16 LKQYVVHELGIILNE----RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
||+.++++||.+||+ .++|+.+|..+--+ + .+..|+ ...|||..||+.|..++...++
T Consensus 1 ~p~~~R~kLc~lLd~p~~~g~DWr~LAekLgl~-------~----~l~~f~-------~~~SPT~~LLd~WEar~~~~~t 62 (84)
T cd08799 1 IPLSIRQKLCGSLDAPQTRGNDWRMLAHKLNLD-------R----YLNYFA-------TKSSPTGVILDLWEAQHFPDGN 62 (84)
T ss_pred CChHHHHHHHHHcCCCCCCCCCHHHHHHHcCCH-------H----HHHHHH-------cCCChHHHHHHHHHhccCCCCc
Confidence 699999999999997 35899999987633 2 344555 4689999999999987666899
Q ss_pred HHHHHHHHHhcchhhh
Q psy520 92 LSDLIMFLKKAELHQA 107 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~ 107 (455)
|+.|+.+|.+.....|
T Consensus 63 v~~L~~~L~emgR~d~ 78 (84)
T cd08799 63 LSRLAAVLEEMGRHET 78 (84)
T ss_pred HHHHHHHHHHcCCccc
Confidence 9999999998775443
No 469
>cd08310 Death_NFkB-like Death domain of Nuclear Factor-KappaB precursor proteins. Death Domain (DD) of Nuclear Factor-KappaB (NF-kB) precursor proteins. The NF-kB family of transcription factors play a central role in cardiovascular growth, stress response, and inflammation by controlling the expression of a network of different genes. There are five NF-kB proteins, all containing an N-terminal REL Homology Domain (RHD). Two of these, NF-kB1 and NF-kB2 are produced from the processing of the precursor proteins p105 and p100, respectively. In addition to RHD, p105 and p100 contain ANK repeats and a C-terminal DD. NF-kBs are regulated by the Inhibitor of NF-kB (IkB) Kinase (IKK) complex through classical and non-canonical pathways, which differ in the IKK subunits involved and downstream targets. IKKs facilitate the release of NF-kB dimers from an inactive state, allowing them to migrate to the nucleus where they regulate gene transcription. The precursor proteins p105 and p100 function
Probab=98.65 E-value=7.8e-08 Score=72.64 Aligned_cols=71 Identities=15% Similarity=0.260 Sum_probs=59.6
Q ss_pred HHHHhhhhcCCcchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCcHHHHHHHH
Q psy520 20 VVHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLIMFL 99 (455)
Q Consensus 20 ~~~~l~~~ld~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~~~l 99 (455)
++++||.+||+..+|+.+|...- |+ ..|..|+ ...|||..||+.|..+ ++||++|+++|
T Consensus 1 ~r~~L~~lLd~~~dWr~LA~~L~----------~~-~~i~~~~-------~~~sPt~~LL~~we~~---~~tv~~L~~~L 59 (72)
T cd08310 1 TRERLCKLLDDGCDWRELAQLLD----------LG-HLVNFIR-------LSPSPTKMLLDYFEMQ---GGTLERLRDAL 59 (72)
T ss_pred CHHHHHHHhCCCCCHHHHHHHcC----------cH-HHHHHHh-------cCCCHHHHHHHHHHhC---CCCHHHHHHHH
Confidence 37899999999999999999853 33 3477777 5779999999999988 49999999999
Q ss_pred Hhcchhhhhhhh
Q psy520 100 KKAELHQAARYV 111 (455)
Q Consensus 100 ~~~~l~~~~~~~ 111 (455)
.+.....|+.++
T Consensus 60 ~~mgr~dav~~l 71 (72)
T cd08310 60 EVLGETEAVELI 71 (72)
T ss_pred HHcCcHHHHHhc
Confidence 999888777643
No 470
>cd08802 Death_UNC5B Death domain found in Uncoordinated-5B. Death Domain (DD) found in Uncoordinated-5B (UNC5B). UNC5B is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5B signaling is involved in the netrin-1-induced proliferation and migration of renal proximal tubular cells. It is also required for vascular patterning during embryonic development, and its activation inhibits sprouting angiogenesis. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activatio
Probab=98.65 E-value=1.2e-07 Score=73.00 Aligned_cols=75 Identities=15% Similarity=0.301 Sum_probs=61.2
Q ss_pred cCHHHHHHhhhhcCC----cchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCc
Q psy520 16 LKQYVVHELGIILNE----RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
||+.++++||..||+ .++|+.+|..+--+ + .+..|| ...|||..||+.|..+++..++
T Consensus 1 ~p~~vR~kLc~~Ld~p~~~g~DW~~LAekL~ld-------~----yl~~f~-------~~psPT~~LLd~WE~~~~~~~~ 62 (84)
T cd08802 1 IPLSIRQKICNSLDAPNSRGNDWRLLAQKLSMD-------R----YLNYFA-------TKASPTGVILDLWEARHQDDGD 62 (84)
T ss_pred CChhHHHHHHHHhCCCCCCCCcHHHHHHHcCch-------h----HHHHHH-------cCCCcHHHHHHHHHhcCCCccc
Confidence 699999999999997 47899999986633 2 344555 3569999999999998767899
Q ss_pred HHHHHHHHHhcchhhhh
Q psy520 92 LSDLIMFLKKAELHQAA 108 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~~ 108 (455)
|++|+++|.+.....+.
T Consensus 63 v~~L~~~L~~mgR~D~~ 79 (84)
T cd08802 63 LNSLASALEEMGKSEML 79 (84)
T ss_pred HHHHHHHHHHcCcchHH
Confidence 99999999988765444
No 471
>KOG1235|consensus
Probab=98.50 E-value=8.5e-07 Score=92.02 Aligned_cols=162 Identities=19% Similarity=0.198 Sum_probs=97.4
Q ss_pred HHhhcCCCCCCCCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCC------------------------cch
Q psy520 160 ERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSN------------------------SDN 215 (455)
Q Consensus 160 ~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~------------------------~~~ 215 (455)
+.+...|++ +-||.-+.|.||+|+.++|..||||+-+..-...... .++
T Consensus 158 e~if~~f~~-------~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE 230 (538)
T KOG1235|consen 158 EDIFSEFDE-------EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDE 230 (538)
T ss_pred HHHHHhcCc-------chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHH
Confidence 344455665 5799999999999999999999999976543211000 000
Q ss_pred hHhhhhhHHHHHHHHHHHHc----CCCcce---ecccccccC--cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHH
Q psy520 216 TEAAMIPILLFENEVQTLSQ----CKHVNL---LRLLGFCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 286 (455)
Q Consensus 216 ~~~~~~~~~~~~~E~~~l~~----l~h~ni---v~l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i 286 (455)
..........|.+|.+-..+ ++|-+. |.+-..+.+ ....|+||||.|..+.|.-.-.. ..++... |
T Consensus 231 ~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~---i 305 (538)
T KOG1235|consen 231 IAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK--RGISPHD---I 305 (538)
T ss_pred HHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH--cCCCHHH---H
Confidence 00001112345566554443 345551 222232222 56789999999997766532211 1244443 3
Q ss_pred HHHHHHHHHH-HHcCCCCeEecCCCCCcEEECC----CCceEEccccccccccC
Q psy520 287 ALGVAEALHY-LHSLSKPIIHRDVKSANVLLDE----NFVPKLGDFGIVKMSET 335 (455)
Q Consensus 287 ~~~i~~gL~~-LH~~~~~iiH~Dikp~NILl~~----~~~~kl~DFGla~~~~~ 335 (455)
+..+.++... +=. .|++|+|-+|.||++.. ++.+.+.|||+......
T Consensus 306 ~~~l~~~~~~qIf~--~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 306 LNKLVEAYLEQIFK--TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHHHHHHHHHHHh--cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 3333333221 112 57999999999999983 67899999999876544
No 472
>cd08800 Death_UNC5A Death domain found in Uncoordinated-5A. Death Domain (DD) found in Uncoordinated-5A (UNC5A). UNC5A is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a critical role in neuronal development and differentiation, as well as axon-guidance. It also plays a role in regulating apoptosis in non-neuronal cells as a downstream target of p53. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathway
Probab=98.45 E-value=9.6e-07 Score=67.65 Aligned_cols=75 Identities=13% Similarity=0.279 Sum_probs=62.0
Q ss_pred cCHHHHHHhhhhcCC----cchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCc
Q psy520 16 LKQYVVHELGIILNE----RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
+|+.++++||..||+ .++|+.+|...--+ ..+..|+ .-.|||..||+.|.++++..++
T Consensus 1 ip~~iR~kLc~lLD~p~~~G~DWr~LA~kL~ld-----------~~~~~f~-------~~pSPT~~LLd~WEa~~~~~g~ 62 (84)
T cd08800 1 IPFLIRQKIISSLDAPCPNGADWRLLAQKLKLD-----------SHLSFFA-------SKSSPTAVILNLWEAQHFPNGN 62 (84)
T ss_pred CChHHHHHHHHHcCCCCCCCCcHHHHHHHcCCc-----------cHHHHHH-------cCCChHHHHHHHHHhccCCCCc
Confidence 689999999999996 68999999987654 2455555 3569999999999998888999
Q ss_pred HHHHHHHHHhcchhhhh
Q psy520 92 LSDLIMFLKKAELHQAA 108 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~~ 108 (455)
|.+|...|.......|+
T Consensus 63 l~~L~~~l~emGR~da~ 79 (84)
T cd08800 63 LNQLAAVVAEIGKQDAM 79 (84)
T ss_pred HHHHHHHHHHhCchHHH
Confidence 99999999877655554
No 473
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.43 E-value=2.4e-06 Score=80.26 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=81.1
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcce--ecccccccC-cc
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL--LRLLGFCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~-~~ 252 (455)
..||+|..+.||+. . +..+++|....... .....+|.++++.+..-.+ .+.+++..+ +.
T Consensus 7 ~~i~~G~t~~~y~~--~-~~~~VlR~~~~~~~---------------~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~ 68 (226)
T TIGR02172 7 TQTGEGGNGESYTH--K-TGKWMLKLYNPGFD---------------KETIKREFDASRKVFSLGIPTPHPFDLVEDGGR 68 (226)
T ss_pred eeecCCCCcceeEe--c-CCCEEEEeCCCCCC---------------HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCe
Confidence 56899999999984 2 45678888753221 2225678988888754333 445666554 55
Q ss_pred eeEEEEeccCCC-HH--------------HHHhh----cCCC--CCCCHHHHHH-HHH----------HHHH-HHHHHH-
Q psy520 253 NCIVYEYMCNGS-LY--------------DRLAR----VNNT--PPLDSNKRYS-IAL----------GVAE-ALHYLH- 298 (455)
Q Consensus 253 ~~lV~e~~~~gs-L~--------------~~l~~----~~~~--~~l~~~~~~~-i~~----------~i~~-gL~~LH- 298 (455)
..+||++++|.+ +. ..+.. ...- ...+...... +.. .+.. ...+|.
T Consensus 69 ~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~ 148 (226)
T TIGR02172 69 LGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKE 148 (226)
T ss_pred eeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence 678999998863 11 11111 1100 0111111110 100 0111 122222
Q ss_pred -cCCCCeEecCCCCCcEEECCCCceEEccccccccc
Q psy520 299 -SLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 299 -~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
.....++|||+.|.||++++++ +.|+||+.+...
T Consensus 149 ~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~G 183 (226)
T TIGR02172 149 VPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGYG 183 (226)
T ss_pred CCCCCceEecCCCCCcEEEcCCC-cEEEechhcCcC
Confidence 2234579999999999999988 999999977643
No 474
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.39 E-value=2.9e-06 Score=79.03 Aligned_cols=155 Identities=18% Similarity=0.236 Sum_probs=93.7
Q ss_pred CCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcc----h-------hHhhhhhHHHHHHHHHHHHcCC--
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSD----N-------TEAAMIPILLFENEVQTLSQCK-- 237 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~E~~~l~~l~-- 237 (455)
...+...|++|--+.||+|...++..||||+.+.....-..... + .........=...|+..|+++.
T Consensus 49 i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA 128 (268)
T COG1718 49 ITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA 128 (268)
T ss_pred eeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 33455678899999999999877899999998764331111000 0 0000000111234555566553
Q ss_pred CcceecccccccCcceeEEEEeccCCCH-HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEE
Q psy520 238 HVNLLRLLGFCNNIMNCIVYEYMCNGSL-YDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL 316 (455)
Q Consensus 238 h~niv~l~~~~~~~~~~lV~e~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl 316 (455)
+-.+.+-+++ ....|||||+....+ .-.|.. .++.......+..++++.+.-|-.. .++||+||..-|||+
T Consensus 129 GVrvP~Pi~~---~~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~~-a~LVHgDLSEyNiL~ 200 (268)
T COG1718 129 GVRVPEPIAF---RNNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYKE-AGLVHGDLSEYNILV 200 (268)
T ss_pred CCCCCCceee---cCCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHHh-cCcccccchhhheEE
Confidence 2222222322 334789999954311 111111 1233335777788888888776552 579999999999999
Q ss_pred CCCCceEEcccccccccc
Q psy520 317 DENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 317 ~~~~~~kl~DFGla~~~~ 334 (455)
. ++.+.|+|||-|....
T Consensus 201 ~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 201 H-DGEPYIIDVSQAVTID 217 (268)
T ss_pred E-CCeEEEEECccccccC
Confidence 9 8899999999776543
No 475
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.26 E-value=4.6e-06 Score=73.69 Aligned_cols=130 Identities=19% Similarity=0.181 Sum_probs=91.8
Q ss_pred CCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcceec-ccccccCcc
Q psy520 174 RGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLR-LLGFCNNIM 252 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~ 252 (455)
+.+.||+|++|.||+|.+. |..+|+|+-+.++. ...+..|.++|..+.-.++-+ +|.|..
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~---------------r~~l~kEakiLeil~g~~~~p~vy~yg~--- 86 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP---------------RRNLEKEAKILEILAGEGVTPEVYFYGE--- 86 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCcc---------------hhhHHHHHHHHHHhhhcCCCceEEEech---
Confidence 3478999999999999998 67999999875443 444889999999988776655 344322
Q ss_pred eeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCC-CCcEEECCCCceEEccccccc
Q psy520 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK-SANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dik-p~NILl~~~~~~kl~DFGla~ 331 (455)
.++.|||..|-+|.+.-.. .+-.+.. .++..-.-|-. .||-|+.|. |..++|..++.+.|+||..|+
T Consensus 87 ~~i~me~i~G~~L~~~~~~------~~rk~l~----~vlE~a~~LD~--~GI~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 87 DFIRMEYIDGRPLGKLEIG------GDRKHLL----RVLEKAYKLDR--LGIEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhhhhhcCcchhhhhhc------ccHHHHH----HHHHHHHHHHH--hccchhhhcCCceeEEecCCcEEEEEccchh
Confidence 2456999998888776543 1223333 34444334555 679999885 666666666699999999887
Q ss_pred ccc
Q psy520 332 MSE 334 (455)
Q Consensus 332 ~~~ 334 (455)
+-.
T Consensus 155 ~k~ 157 (201)
T COG2112 155 FKK 157 (201)
T ss_pred hcc
Confidence 543
No 476
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.22 E-value=4.9e-06 Score=76.65 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=82.9
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCc---ceecccccc----
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV---NLLRLLGFC---- 248 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~---- 248 (455)
+.+-.....-|.+-..+ |+.+++|..+....... ... .....-....+.+..+.+++.. ....++-..
T Consensus 37 kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~e---r~~-~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~ 111 (229)
T PF06176_consen 37 KVFKNTKRNYVALIEID-GKKYILKEPREENRRPE---RRF-KSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKI 111 (229)
T ss_pred EeecCCCccEEEEEEEC-CcEEEEeccchhhhhHH---HHH-HHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeee
Confidence 55555566667666665 78999998865432100 000 0000001123344444444322 222222111
Q ss_pred --cCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcc
Q psy520 249 --NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 249 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
.....+++|||++|..|.+... ++. .++..++.++.-||+ .|++|||.+|.|+++..++ ++++|
T Consensus 112 ~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~--~G~~HGD~hpgNFlv~~~~-i~iID 177 (229)
T PF06176_consen 112 FRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHK--HGFYHGDPHPGNFLVSNNG-IRIID 177 (229)
T ss_pred ccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHH--cCCccCCCCcCcEEEECCc-EEEEE
Confidence 1134468999999998876532 222 255677788999999 8999999999999999654 89999
Q ss_pred cccccc
Q psy520 327 FGIVKM 332 (455)
Q Consensus 327 FGla~~ 332 (455)
|+..+.
T Consensus 178 ~~~k~~ 183 (229)
T PF06176_consen 178 TQGKRM 183 (229)
T ss_pred Cccccc
Confidence 986553
No 477
>cd08801 Death_UNC5D Death domain found in Uncoordinated-5D. Death Domain (DD) found in Uncoordinated-5D (UNC5D). UNC5D is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=98.22 E-value=6e-06 Score=63.56 Aligned_cols=70 Identities=11% Similarity=0.315 Sum_probs=59.4
Q ss_pred cCHHHHHHhhhhcCC----cchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCc
Q psy520 16 LKQYVVHELGIILNE----RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
+|+.++++||..||+ .++|+.+|....-| +.|--|. ...|||.-+|+-|.++++.+.+
T Consensus 1 iP~~iRqklC~~LD~p~~kg~DWR~LA~kL~iD-----------Ryl~yFa-------tk~SPT~viLdLWEa~~~~~g~ 62 (98)
T cd08801 1 IPYSIRQRICATFDTPNAKGKDWQMLAQKNSID-----------RNLSYFA-------TQSSPSAVILSLWEARHQHDGD 62 (98)
T ss_pred CchhHHHHHHHHcCCCCCCCccHHHHHHHhcch-----------hHHHHHh-------cCCChHHHHHHHHHHhcCCCCC
Confidence 699999999999998 68999999987755 2455555 3589999999999999999999
Q ss_pred HHHHHHHHHhcc
Q psy520 92 LSDLIMFLKKAE 103 (455)
Q Consensus 92 ~~~l~~~l~~~~ 103 (455)
+..|..+|.+..
T Consensus 63 L~~La~aleeiG 74 (98)
T cd08801 63 LDSLACALEEIG 74 (98)
T ss_pred HHHHHHHHHHhC
Confidence 999988887654
No 478
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.16 E-value=1e-05 Score=75.39 Aligned_cols=141 Identities=22% Similarity=0.221 Sum_probs=80.5
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcc--eecccccccC---
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN--LLRLLGFCNN--- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~--- 250 (455)
+.|+.|..+.||+....+ ..+++|...... ......+|..++..+.... +.+++.++..
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~~---------------~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~ 66 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPPD---------------AAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEF 66 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSHH---------------HHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCCC---------------CHHHHHHHHHHHHHHHhcCCCCceEEeecccccc
Confidence 568999999999999886 699999975320 1334667888877775332 3445543211
Q ss_pred -cceeEEEEeccCCCHHH----------------HH---hhcC-CCCCCCHHH---------HHHH------------HH
Q psy520 251 -IMNCIVYEYMCNGSLYD----------------RL---ARVN-NTPPLDSNK---------RYSI------------AL 288 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~----------------~l---~~~~-~~~~l~~~~---------~~~i------------~~ 288 (455)
...+++|++++|.++.. .+ +... ...++.... .... ..
T Consensus 67 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (239)
T PF01636_consen 67 NGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLE 146 (239)
T ss_dssp TSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred cccceEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhH
Confidence 34578999999988877 11 1110 111111111 0000 11
Q ss_pred HHHH-HHHHHHc-----CCCCeEecCCCCCcEEEC-CCCceEEcccccccc
Q psy520 289 GVAE-ALHYLHS-----LSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKM 332 (455)
Q Consensus 289 ~i~~-gL~~LH~-----~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla~~ 332 (455)
.+.. .+..+++ ....++|+|+.|.||+++ +++.+-|+||+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 147 ELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHHHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 1222 2333332 235699999999999999 666668999997654
No 479
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.16 E-value=1.8e-05 Score=74.95 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=79.9
Q ss_pred cccccCC-EEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-CcceecccccccC-cce
Q psy520 177 KLGEGQF-GTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGFCNN-IMN 253 (455)
Q Consensus 177 ~LG~G~f-g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-~~~ 253 (455)
.|-.|.. ..||+.... +..+.||...... .....+|+++++.+. +--+.+++++... +..
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----------------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 67 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP----------------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRA 67 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc----------------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCcc
Confidence 4555555 889999765 4788888875321 011557888877773 2234445555544 567
Q ss_pred eEEEEeccCCCHHHHH-------------------hhcCC-CCCCCHH--HHHHHHH--------------------HHH
Q psy520 254 CIVYEYMCNGSLYDRL-------------------ARVNN-TPPLDSN--KRYSIAL--------------------GVA 291 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l-------------------~~~~~-~~~l~~~--~~~~i~~--------------------~i~ 291 (455)
++||++++|.+|.... +.... ..++... ....... .+.
T Consensus 68 ~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (244)
T cd05150 68 WLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAE 147 (244)
T ss_pred EEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHH
Confidence 8999999998776431 11110 0011100 0000000 011
Q ss_pred HHHHHHHc-----CCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 292 EALHYLHS-----LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 292 ~gL~~LH~-----~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..+..|-. ....++|||+.|.|||+++++...|+||+.+..
T Consensus 148 ~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 148 ELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred HHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 11222211 124589999999999999988888999997653
No 480
>PLN02876 acyl-CoA dehydrogenase
Probab=98.15 E-value=1.8e-05 Score=88.26 Aligned_cols=147 Identities=17% Similarity=0.251 Sum_probs=89.6
Q ss_pred CcccccCCEEEEEEEEcCC---cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC-Ccce--eccccccc
Q psy520 176 NKLGEGQFGTVYYGKLKNG---MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNL--LRLLGFCN 249 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~---~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~ 249 (455)
..|+.|.++.+|+....++ ..+++|+......... ...+.+|.++++.+. |.++ .+++.+|.
T Consensus 44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~------------~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~ 111 (822)
T PLN02876 44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQS------------AHAVEREYQVLRALGEHTDVPVPKVYCLCT 111 (822)
T ss_pred EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCcc------------HHHHHHHHHHHHHHhhcCCCCCCcEEEEec
Confidence 6789999999999887643 4678887643221100 234779999999985 6654 66677766
Q ss_pred C----cceeEEEEeccCCCHHH--------------------H---HhhcCC--------CCCCC--HHHHHHHHH----
Q psy520 250 N----IMNCIVYEYMCNGSLYD--------------------R---LARVNN--------TPPLD--SNKRYSIAL---- 288 (455)
Q Consensus 250 ~----~~~~lV~e~~~~gsL~~--------------------~---l~~~~~--------~~~l~--~~~~~~i~~---- 288 (455)
+ +..++||||++|..+.+ . |+.... +.+.. ..++..+..
T Consensus 112 d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~ 191 (822)
T PLN02876 112 DASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLA 191 (822)
T ss_pred CCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHH
Confidence 5 46789999998865321 1 111110 00111 112222111
Q ss_pred -----------HHHHHHHHHHcC--C-------CCeEecCCCCCcEEECCC-C-ceEEcccccccccc
Q psy520 289 -----------GVAEALHYLHSL--S-------KPIIHRDVKSANVLLDEN-F-VPKLGDFGIVKMSE 334 (455)
Q Consensus 289 -----------~i~~gL~~LH~~--~-------~~iiH~Dikp~NILl~~~-~-~~kl~DFGla~~~~ 334 (455)
.+...+.+|... . ..+||||+++.||+++.+ + ..-|.||.++....
T Consensus 192 ~~~~~~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 192 STGEGKPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred hhcccCCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 123345566432 1 249999999999999853 3 35799999876543
No 481
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.06 E-value=1.4e-05 Score=72.80 Aligned_cols=105 Identities=27% Similarity=0.223 Sum_probs=81.4
Q ss_pred HHHHHHHHHcCCC-cceecccccccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCC
Q psy520 226 FENEVQTLSQCKH-VNLLRLLGFCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-SKP 303 (455)
Q Consensus 226 ~~~E~~~l~~l~h-~niv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~-~~~ 303 (455)
...|.-++..+++ +++.+++|+|.. .+|.||...+++...-.....--..+|..|.+||.++++.+.+|+.. ...
T Consensus 6 ~~~E~lll~~l~~~~~~pk~lG~CG~---~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 6 QNNEPLLLQLLQGSEPFPKLLGSCGR---FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred hccHHHHHHHcCCCCCCCCeeeECCC---EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 3468888888876 699999999854 67999998776643210000112368999999999999999999975 234
Q ss_pred eEecCCCCCcEEECCCCceEEccccccccc
Q psy520 304 IIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 304 iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
+.-.|++++|+-++++|.+|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 788899999999999999999999876543
No 482
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.05 E-value=3.6e-05 Score=72.62 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=26.3
Q ss_pred CCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 302 KPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..++|||+.+.||++++++..-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 4589999999999999776667999997654
No 483
>PRK10593 hypothetical protein; Provisional
Probab=97.87 E-value=0.0002 Score=70.13 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=52.2
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCC---cceecccccccC--
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH---VNLLRLLGFCNN-- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~-- 250 (455)
+.||.|..+.||+....++ .+.+|..+.... ...|..|...|+.+.- ..+.+++++|..
T Consensus 20 ~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~---------------~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~ 83 (297)
T PRK10593 20 ECISEQPYAALWALYDSQG-NPMPLMARSFST---------------PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ 83 (297)
T ss_pred eecCCccceeEEEEEcCCC-CEEEEEeccccc---------------chHHHHHHHHHHHHccCCCCCcCcEEEEeccCC
Confidence 5799999999999876644 567777532111 2348899999988743 356667765532
Q ss_pred --cceeEEEEeccCCCH
Q psy520 251 --IMNCIVYEYMCNGSL 265 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL 265 (455)
+..+||||+++|+++
T Consensus 84 ~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 84 SPGPDVLLLERLRGVSV 100 (297)
T ss_pred cCCCeEEEEeccCCEec
Confidence 567999999998765
No 484
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.85 E-value=0.00015 Score=66.15 Aligned_cols=132 Identities=23% Similarity=0.256 Sum_probs=87.5
Q ss_pred CCcccccCC-EEEEEEEEcCCcEEEEEEeecccCcCCCCc---c---h--hHhhhhhHHHHHHHHHHHHcCC---Ccce-
Q psy520 175 GNKLGEGQF-GTVYYGKLKNGMEIAVKTLENNANYSSSNS---D---N--TEAAMIPILLFENEVQTLSQCK---HVNL- 241 (455)
Q Consensus 175 ~~~LG~G~f-g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~---~---~--~~~~~~~~~~~~~E~~~l~~l~---h~ni- 241 (455)
.+.||.|+- |.||+++.. |+.||+|..+.-........ . + .........-|..|.+...+++ +.++
T Consensus 42 lefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~ 120 (207)
T PF13095_consen 42 LEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLW 120 (207)
T ss_pred eeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCce
Confidence 388999999 999999997 78999999433211111110 0 0 0001122345889999888885 4455
Q ss_pred -ecccccc--c-C----------------cceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Q psy520 242 -LRLLGFC--N-N----------------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLS 301 (455)
Q Consensus 242 -v~l~~~~--~-~----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~ 301 (455)
|+++||. . + ....||.||.+... .++. +-+.++.+-+..+|.
T Consensus 121 Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~----~~~~~~~~dl~~~~k-- 182 (207)
T PF13095_consen 121 AVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQI----RDIPQMLRDLKILHK-- 182 (207)
T ss_pred EEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccch----hHHHHHHHHHHHHHH--
Confidence 8888864 1 0 12256777775543 1222 235677788899999
Q ss_pred CCeEecCCCCCcEEECCCCceEEcccccc
Q psy520 302 KPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.||+-+|+++.|.. .-||+|||.+
T Consensus 183 ~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 183 LGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred CCeeeccCcccccc-----CCEEEecccC
Confidence 78999999999988 4589999964
No 485
>KOG2268|consensus
Probab=97.82 E-value=2e-05 Score=76.01 Aligned_cols=147 Identities=14% Similarity=0.144 Sum_probs=97.5
Q ss_pred CCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcc--------hhHhh-hhhHHHHHHHHHHHHcCC-Ccc
Q psy520 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSD--------NTEAA-MIPILLFENEVQTLSQCK-HVN 240 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~E~~~l~~l~-h~n 240 (455)
++.+++.||-|--+.||.+-+.+|++.++|.-+....+-.+... ....| ...+....+|+..|+.+. |-.
T Consensus 93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 44577999999999999999998999999975432211100000 00112 223445677888888874 221
Q ss_pred -eecccccccCcceeEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCC
Q psy520 241 -LLRLLGFCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 241 -iv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
|.+.++ ....|+|||++.|..|...-+- .+.+ .+...++.-+.-|-+ +|+||||..-=||+++++
T Consensus 173 pVPkpiD---~~RH~Vvmelv~g~Pl~~v~~v------~d~~---~ly~~lm~~Iv~la~--~GlIHgDFNEFNimv~dd 238 (465)
T KOG2268|consen 173 PVPKPID---HNRHCVVMELVDGYPLRQVRHV------EDPP---TLYDDLMGLIVRLAN--HGLIHGDFNEFNIMVKDD 238 (465)
T ss_pred CCCCccc---ccceeeHHHhhcccceeeeeec------CChH---HHHHHHHHHHHHHHH--cCceecccchheeEEecC
Confidence 222222 2677999999988888654321 2222 344455555566667 899999999999999999
Q ss_pred CceEEccccccc
Q psy520 320 FVPKLGDFGIVK 331 (455)
Q Consensus 320 ~~~kl~DFGla~ 331 (455)
+.++++||.-..
T Consensus 239 ~~i~vIDFPQmv 250 (465)
T KOG2268|consen 239 DKIVVIDFPQMV 250 (465)
T ss_pred CCEEEeechHhh
Confidence 999999998654
No 486
>smart00005 DEATH DEATH domain, found in proteins involved in cell death (apoptosis). Alpha-helical domain present in a variety of proteins with apoptotic functions. Some (but not all) of these domains form homotypic and heterotypic dimers.
Probab=97.80 E-value=5e-05 Score=60.01 Aligned_cols=81 Identities=19% Similarity=0.300 Sum_probs=67.0
Q ss_pred HHHHHhhhhcCC--cchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCcHHHHH
Q psy520 19 YVVHELGIILNE--RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLI 96 (455)
Q Consensus 19 ~~~~~l~~~ld~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~ 96 (455)
..+.+|+.++|. ..+|++||..+- ++..+|+.|+....+ ...+|+.++|..|.+++..++|+..|+
T Consensus 3 ~~~~~~~~l~~~~~g~~W~~la~~Lg----------~~~~~i~~i~~~~~~--~~~~~~~~lL~~W~~~~g~~at~~~L~ 70 (88)
T smart00005 3 LTREKLAKLLDHPLGLDWRELARKLG----------LSEADIDQIRTEAPR--DLAEQSVQLLRLWEQREGKNATLGTLL 70 (88)
T ss_pred hHHHHHHHHHcCccchHHHHHHHHcC----------CCHHHHHHHHHHCCC--CHHHHHHHHHHHHHHccchhhHHHHHH
Confidence 456777777774 799999998854 447899999987654 467999999999999877789999999
Q ss_pred HHHHhcchhhhhhhh
Q psy520 97 MFLKKAELHQAARYV 111 (455)
Q Consensus 97 ~~l~~~~l~~~~~~~ 111 (455)
..|.+..+..+++.+
T Consensus 71 ~aL~~~~~~d~a~~i 85 (88)
T smart00005 71 EALRKMGRDDAVELL 85 (88)
T ss_pred HHHHHcChHHHHHHH
Confidence 999999988887644
No 487
>KOG0576|consensus
Probab=97.79 E-value=5.1e-06 Score=86.07 Aligned_cols=181 Identities=19% Similarity=0.152 Sum_probs=124.7
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCcc-eecccccccC-cce
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN-LLRLLGFCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~-~~~ 253 (455)
+-+++|+++.+||.+....+....+.+... ....-+++.|.+++||| .+..++-+.. ...
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~------------------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~ 309 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT------------------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYL 309 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc------------------hhhHHHHHHHHHccCCCCcccccccCCccccc
Confidence 568999999999976543333445554321 11345889999999999 5555554433 677
Q ss_pred eEEEEeccCC-CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 254 CIVYEYMCNG-SLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 254 ~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++++++.++ |-....... ...+..-+...+...-+++++++|+ -.=+|+| ||+..+ +..|.+||+....
T Consensus 310 ~i~~~i~s~~rs~~~~~~~s--e~~~~~~~~~~~~r~et~~l~~l~~--~~~~~~d----~~l~s~-~~~~~~~~~v~~~ 380 (829)
T KOG0576|consen 310 WIPMRICSTGRSSALEMTVS--EIALEQYQFAYPLRKETRPLAELHS--SYKVHRD----NILGSE-EEVKLLDFAVPPQ 380 (829)
T ss_pred chhhhhhcCCccccccCChh--hHhhhhhhhhhhhhhhccccccccc--ccccCcc----cccccc-cccccccccCCcc
Confidence 8899999877 222111110 1123444555677788889999998 3348888 777765 6889999998765
Q ss_pred ccCCCcccceeccCCCCCCcCCcccc-cCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q psy520 333 SETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDD 387 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~s~~sDi~SlGvvl~elltG~~p~~~ 387 (455)
..... ......+|+.++|||+. .+.+....|.||.|+--.++.-|.+|-..
T Consensus 381 L~~~~----~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 381 LTRTM----KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred cCccc----ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 44322 34567899999999955 55678899999999988888888777543
No 488
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.75 E-value=0.00043 Score=63.44 Aligned_cols=138 Identities=17% Similarity=0.185 Sum_probs=89.4
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhH----hhhhhHHHHHHHHHHHHcCC------Ccceeccc
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTE----AAMIPILLFENEVQTLSQCK------HVNLLRLL 245 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~----~~~~~~~~~~~E~~~l~~l~------h~niv~l~ 245 (455)
..||+|+.-.||.- .+.....||+.+... .........- .......++.+|+.....+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~-~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--PDDPNLCIKVMRPDR-GERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC--CCCCCeEEEEEcccc-ccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 67999999999984 345678999997665 1110000000 00001344666776666555 78999999
Q ss_pred ccccC-cceeEEEEeccCC------CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEecCCCCCcEEECC
Q psy520 246 GFCNN-IMNCIVYEYMCNG------SLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~g------sL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
|+... ....+|+|...+. ||.+++.. ..++. .. ...+-.-..||-+ .+|+.+|++|.||++..
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~~---~~~L~~f~~~l~~--~~Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-EL---RQALDEFKRYLLD--HHIVIRDLNPHNIVVQR 153 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-HH---HHHHHHHHHHHHH--cCCeecCCCcccEEEEe
Confidence 98876 6778888887642 67888754 23555 33 3333344556666 67999999999999963
Q ss_pred C--C--ceEEcc
Q psy520 319 N--F--VPKLGD 326 (455)
Q Consensus 319 ~--~--~~kl~D 326 (455)
+ + .+.|+|
T Consensus 154 ~~~~~~~lvlID 165 (199)
T PF10707_consen 154 RDSGEFRLVLID 165 (199)
T ss_pred cCCCceEEEEEe
Confidence 3 2 577887
No 489
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.73 E-value=0.00026 Score=66.52 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=46.6
Q ss_pred CcccccCCEEEEEEEEcC--CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCccee-cccccccCcc
Q psy520 176 NKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLL-RLLGFCNNIM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~ 252 (455)
+.|..|-...+|+....+ +..|++|+....... . . .-.+|+.+++.+...+++ ++++...
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~---~-~----------d~~~E~~~~~~l~~~gl~P~v~~~~~--- 66 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL---I-I----------DRERELRIHKLLSKHGLAPKLYATFQ--- 66 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc---e-e----------cHHHHHHHHHHHHhCCCCCeEEEEeC---
Confidence 467888899999998763 578999976532210 0 0 123688888877543333 3333322
Q ss_pred eeEEEEeccCCCH
Q psy520 253 NCIVYEYMCNGSL 265 (455)
Q Consensus 253 ~~lV~e~~~~gsL 265 (455)
..++|||++|.++
T Consensus 67 ~~~l~e~i~G~~l 79 (235)
T cd05157 67 NGLIYEFIPGRTL 79 (235)
T ss_pred CcEEEEeeCCCcC
Confidence 2489999998776
No 490
>PF00531 Death: Death domain; InterPro: IPR000488 The death domain (DD) is a homotypic protein interaction module composed of a bundle of six alpha-helices. DD is related in sequence and structure to the death effector domain (DED, see IPR001875 from INTERPRO) and the caspase recruitment domain (CARD, see IPR001315 from INTERPRO), which work in similar pathways and show similar interaction properties []. DD bind each other forming oligomers. Mammals have numerous and diverse DD-containing proteins []. Within these proteins, the DD domains can be found in combination with other domains, including: CARDs, DEDs, ankyrin repeats (IPR002110 from INTERPRO), caspase-like folds, kinase domains, leucine zippers (IPR002158 from INTERPRO), leucine-rich repeats (LRR) (IPR001611 from INTERPRO), TIR domains (IPR000157 from INTERPRO), and ZU5 domains (IPR000906 from INTERPRO) []. Some DD-containing proteins are involved in the regulation of apoptosis and inflammation through their activation of caspases and NF-kappaB, which typically involves interactions with TNF (tumour necrosis factor) cytokine receptors [, ]. In humans, eight of the over 30 known TNF receptors contain DD in their cytoplasmic tails; several of these TNF receptors use caspase activation as a signalling mechanism. The DD mediates self-association of these receptors, thus giving the signal to downstream events that lead to apoptosis. Other DD-containing proteins, such as ankyrin, MyD88 and pelle, are probably not directly involved in cell death signalling. DD-containing proteins also have links to innate immunity, communicating with Toll family receptors through bipartite adapter proteins such as MyD88 [].; GO: 0005515 protein binding, 0007165 signal transduction; PDB: 3OQ9_L 3EZQ_F 1E41_A 1E3Y_A 2GF5_A 2OF5_L 3EWV_E 3G5B_A 3MOP_L 2A9I_A ....
Probab=97.67 E-value=3.9e-05 Score=59.80 Aligned_cols=76 Identities=21% Similarity=0.309 Sum_probs=61.9
Q ss_pred Hhhhhc--CCcchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCcHHHHHHHHH
Q psy520 23 ELGIIL--NERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLIMFLK 100 (455)
Q Consensus 23 ~l~~~l--d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~~~l~ 100 (455)
+|++++ +..++|+.||... .++..+|+.|+.... ...+||.++|..|..+...++|+..|++.|.
T Consensus 2 ~l~~~l~~~~~~~Wk~La~~L----------g~~~~~i~~i~~~~~---~~~~~~~~~L~~W~~~~~~~at~~~L~~aL~ 68 (83)
T PF00531_consen 2 KLFDLLAEDLGSDWKRLARKL----------GLSESEIENIEEENP---DLREQTYEMLQRWRQREGPNATVDQLIQALR 68 (83)
T ss_dssp HHHHHHHHSHSTCHHHHHHHT----------TS-HHHHHHHHHHST---SHHHHHHHHHHHHHHHHGSTSSHHHHHHHHH
T ss_pred hHHHHHhhcchhhHHHHHHHh----------CcCHHHHHHHHHhCC---ChHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 577777 5689999999875 355789999997543 2568999999999877556899999999999
Q ss_pred hcchhhhhhhh
Q psy520 101 KAELHQAARYV 111 (455)
Q Consensus 101 ~~~l~~~~~~~ 111 (455)
+.+...+++.+
T Consensus 69 ~~~~~d~~~~i 79 (83)
T PF00531_consen 69 DIGRNDLAEKI 79 (83)
T ss_dssp HTTHHHHHHHH
T ss_pred HCCcHHHHHHH
Confidence 99998888754
No 491
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.62 E-value=0.00035 Score=66.80 Aligned_cols=138 Identities=15% Similarity=0.116 Sum_probs=77.4
Q ss_pred cccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCccee-cccccccCcceeE
Q psy520 177 KLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLL-RLLGFCNNIMNCI 255 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~l 255 (455)
.+..|-.+.+|+.... +..+++|.......... ....+|..+++.+....++ +++.... .++
T Consensus 3 ~~~~G~tn~~y~~~~~-~~~~vlR~~~~~~~~~~-------------~~r~~E~~~l~~l~~~g~~P~~i~~~~---~~~ 65 (256)
T TIGR02721 3 TLSGGLTNRSWRIEHP-GISFVWRPQSPVCKALG-------------VDRQREYQILQALSALGLAPKPILVNE---HWL 65 (256)
T ss_pred cCCCcCcCCeEEEEeC-CccEEEeeCCccccccc-------------CcHHHHHHHHHHHHhcCCCCceEEEeC---CEE
Confidence 3567888899998754 67899987643221100 0145788888888543333 2333322 368
Q ss_pred EEEeccCCCHHH--------------H---HhhcCC-CCCCCHHHH-HHHHHHH---------HHHHHHHHcC------C
Q psy520 256 VYEYMCNGSLYD--------------R---LARVNN-TPPLDSNKR-YSIALGV---------AEALHYLHSL------S 301 (455)
Q Consensus 256 V~e~~~~gsL~~--------------~---l~~~~~-~~~l~~~~~-~~i~~~i---------~~gL~~LH~~------~ 301 (455)
||+|++|.++.. . ++.... ..+++.... ..+..++ ...+..+-.. .
T Consensus 66 v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T TIGR02721 66 LVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLP 145 (256)
T ss_pred EEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCC
Confidence 999999876532 1 111111 112222111 1111111 1112222111 1
Q ss_pred CCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 302 KPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..++|+|+.|.||++++++ +.|+||..+..
T Consensus 146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred CeeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 3589999999999999887 78999997664
No 492
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.59 E-value=0.0012 Score=64.84 Aligned_cols=161 Identities=14% Similarity=0.073 Sum_probs=86.0
Q ss_pred eHHHHHHhhcCCCCCCCCcCCCcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHH
Q psy520 155 TFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLS 234 (455)
Q Consensus 155 ~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 234 (455)
+..+|......|.-. .......++.|....+|+....+ ..+++|+.+.... ......|+.++.
T Consensus 8 ~~~~l~~~l~~y~~~-~~~~i~~~~~G~~n~~y~v~t~~-~~~vLK~~~~~~~---------------~~~i~~e~~~l~ 70 (307)
T TIGR00938 8 SDEEMSSFLDGYDLG-ELLSLKGIAEGVENSNYLLTTDV-GRYILTLYEKRVK---------------AEELPFFLALTT 70 (307)
T ss_pred CHHHHHHHHHhcCCC-CceeccccCCccccceEEEEeCC-CcEEEEEecCCCC---------------HHHHHHHHHHHH
Confidence 334555544444221 12223667888778999987654 4688898653211 111334555555
Q ss_pred cCCCc--ceecccccc-------cCcceeEEEEeccCCCHH-----------H---HHhhcCCC--CC-------CCHHH
Q psy520 235 QCKHV--NLLRLLGFC-------NNIMNCIVYEYMCNGSLY-----------D---RLARVNNT--PP-------LDSNK 282 (455)
Q Consensus 235 ~l~h~--niv~l~~~~-------~~~~~~lV~e~~~~gsL~-----------~---~l~~~~~~--~~-------l~~~~ 282 (455)
.+... .+.+++... .++..+++++|++|.++. . .++....+ .+ ..|..
T Consensus 71 ~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~ 150 (307)
T TIGR00938 71 HLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHI 150 (307)
T ss_pred HHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHH
Confidence 55321 133333311 125668999999886532 1 11211111 00 01111
Q ss_pred HH------------HHHHHHHHHHHHHHc-----CCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 283 RY------------SIALGVAEALHYLHS-----LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 283 ~~------------~i~~~i~~gL~~LH~-----~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.. .....+...+.++.. ...+++|+|+++.||+++.++.+.|+||+.+..
T Consensus 151 ~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 151 LAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 00 001122334555532 236899999999999999988778999997653
No 493
>PRK05231 homoserine kinase; Provisional
Probab=97.57 E-value=0.0012 Score=65.08 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=27.4
Q ss_pred CCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 301 SKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 301 ~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..++||+|++|.||+++.+...-|+||+.+..
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 35899999999999999776668999998764
No 494
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.48 E-value=0.00065 Score=65.76 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=26.0
Q ss_pred CCeEecCCCCCcEEECCCCc-eEEccccccccc
Q psy520 302 KPIIHRDVKSANVLLDENFV-PKLGDFGIVKMS 333 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~-~kl~DFGla~~~ 333 (455)
..++|||++|.||++++++. .-|+||+.+...
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 35899999999999997555 469999987643
No 495
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.45 E-value=0.0011 Score=67.35 Aligned_cols=82 Identities=12% Similarity=0.124 Sum_probs=53.9
Q ss_pred CcccccCCEEEEEEEEcCC-cEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCC---CcceecccccccCc
Q psy520 176 NKLGEGQFGTVYYGKLKNG-MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK---HVNLLRLLGFCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~-~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 251 (455)
+.||.|.+..||++...+| +.|+||.-......... .+.....++..|.+.|..+. ..++.+++.+.. .
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~------~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~-~ 104 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGE------SWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE-E 104 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccc------cccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC-C
Confidence 5799999999999998766 58999986422111000 01112445677888877762 245666776633 5
Q ss_pred ceeEEEEeccCCC
Q psy520 252 MNCIVYEYMCNGS 264 (455)
Q Consensus 252 ~~~lV~e~~~~gs 264 (455)
..++||||+++..
T Consensus 105 ~~~lVME~L~~~~ 117 (401)
T PRK09550 105 LAVTVMEDLSDHK 117 (401)
T ss_pred CCEEEEecCCCcc
Confidence 5689999998754
No 496
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.43 E-value=0.0017 Score=63.32 Aligned_cols=140 Identities=16% Similarity=0.131 Sum_probs=80.8
Q ss_pred CcccccCCEEEEEEEEcCCcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCc--ceecccccc-----
Q psy520 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV--NLLRLLGFC----- 248 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~----- 248 (455)
..|..|....+|+.... +..+++|+... .. ......|+.++..+.+. .+.+++...
T Consensus 20 ~~i~~G~~n~~y~v~~~-~~~~vLr~~~~-~~---------------~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~ 82 (296)
T cd05153 20 EGISAGIENTNYFVTTD-SGRYVLTLFEK-VS---------------AEELPFFLALLDHLAERGLPVPRPIADRDGEYL 82 (296)
T ss_pred ecccCccccceEEEEeC-CCcEEEEEcCC-CC---------------hHhccHHHHHHHHHHHCCCCCCccccCCCCcEe
Confidence 56888888999998765 45799998753 11 11244566666666332 234443321
Q ss_pred --cCcceeEEEEeccCCCHHH--------------HHhhcCCC--------CCCCHHHHH----------HHHHHHHHHH
Q psy520 249 --NNIMNCIVYEYMCNGSLYD--------------RLARVNNT--------PPLDSNKRY----------SIALGVAEAL 294 (455)
Q Consensus 249 --~~~~~~lV~e~~~~gsL~~--------------~l~~~~~~--------~~l~~~~~~----------~i~~~i~~gL 294 (455)
.++..++|++|++|.++.. .++..... ....|.... .....+..++
T Consensus 83 ~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (296)
T cd05153 83 SELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADEL 162 (296)
T ss_pred eeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHH
Confidence 1245578999999876521 11111100 011111110 0111223344
Q ss_pred HHHHc-----CCCCeEecCCCCCcEEECCCCceEEcccccccc
Q psy520 295 HYLHS-----LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 295 ~~LH~-----~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++.+ ...+++|||+.|.||++++++.+.|+||+.+..
T Consensus 163 ~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 163 ARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred HHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 44442 235799999999999999988889999997664
No 497
>cd08797 Death_NFkB1_p105 Death domain of the Nuclear Factor-KappaB1 precursor protein p105. Death Domain (DD) of the Nuclear Factor-KappaB1 (NF-kB1) precursor protein p105. The NF-kB family of transcription factors play a central role in cardiovascular growth, stress response, and inflammation by controlling the expression of a network of different genes. There are five NF-kB proteins, all containing an N-terminal REL Homology Domain (RHD). NF-kB1 (or p50) is produced from the processing of the precursor protein p105, which contains ANK repeats and a C-terminal DD in addition to the RHD. It is regulated by the classical (or canonical) NF-kB pathway. In the cytosol, p50 forms an inactive complex with RelA (or p65) and the Inhibitor of NF-kB (IkB). Activation is triggered by the phosphorylation and degradation of IkB, resulting in the active DNA-binding p50-RelA dimer to migrate to the nucleus. The classical pathway regulates the majority of genes activated by NF-kB including those encod
Probab=97.41 E-value=0.00062 Score=51.37 Aligned_cols=71 Identities=15% Similarity=0.255 Sum_probs=56.0
Q ss_pred HHHHhhhhcCCc---chHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCcHHHHH
Q psy520 20 VVHELGIILNER---DDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLI 96 (455)
Q Consensus 20 ~~~~l~~~ld~~---~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~ 96 (455)
|+.+||..||+. ..|+.+|...--+ ..+-.|+ .--|||..||+-|... ..+|.+|+
T Consensus 1 ~rqkLc~~Ld~p~~~g~Wr~LA~kL~l~-----------~l~~~f~-------~~pSPt~~LLd~~E~~---~G~l~~L~ 59 (76)
T cd08797 1 VKQQLYKLLESPDPDKNWETLAQKLGLG-----------ILNNAFR-------LSPSPSKTLLDNYEVS---GGTVRELL 59 (76)
T ss_pred ChhHHHHHhCCCCCCCCHHHHHHHHCch-----------hHHHHHh-------CCCCcHHHHHHHHhcC---CCCHHHHH
Confidence 578999999952 3599999886543 2333444 4679999999999987 68999999
Q ss_pred HHHHhcchhhhhhhh
Q psy520 97 MFLKKAELHQAARYV 111 (455)
Q Consensus 97 ~~l~~~~l~~~~~~~ 111 (455)
+.|...-...+.+++
T Consensus 60 ~aL~~mG~~eav~~L 74 (76)
T cd08797 60 AALKRMGYTEAIEVI 74 (76)
T ss_pred HHHHHhCcHHHHHHH
Confidence 999998887777654
No 498
>cd01670 Death Death Domain: a protein-protein interaction domain. Death Domains (DDs) are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. Structural analysis of DD-DD complexes show that the domains interact with each other in many different ways. DD-containing proteins serve as adaptors in signaling pathways and they can recruit other proteins into signaling complexes. In mammals, they are prominent components of the programmed cell death (apoptosis) pathway and are found in a number of other signaling pathways. In invertebrates, they are involved in transcriptional regulation of zygotic patterning genes in insect embryogenesis, and are components of the ToII/NF-kappaB pathway, a conserved innate immune pathway in a
Probab=97.39 E-value=0.00036 Score=53.77 Aligned_cols=72 Identities=21% Similarity=0.324 Sum_probs=59.5
Q ss_pred HHHhhhhcCCcchHHHHHHHhhcCCCCCCCCCcchHHHHHHHHhhccCCCCCCchHHHHHhhhcCCCCCCcHHHHHHHHH
Q psy520 21 VHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLIMFLK 100 (455)
Q Consensus 21 ~~~l~~~ld~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~~~l~ 100 (455)
+..+|+.|. ++|++||-.+. ++..+|+.|+.... ...+|+.++|..|..+....+|+..|+..|.
T Consensus 2 ~~~ia~~lg--~~W~~la~~Lg----------l~~~~I~~i~~~~~---~~~~~~~~mL~~W~~~~~~~at~~~L~~aL~ 66 (79)
T cd01670 2 LDKLAKKLG--KDWKKLARKLG----------LSDGEIDQIEEDNP---RVREQAYQLLLKWEEREGDNATVGNLIEALR 66 (79)
T ss_pred HHHHHHHHh--hHHHHHHHHhC----------CCHHHHHHHHHhCC---CHHHHHHHHHHHHHhccCcCcHHHHHHHHHH
Confidence 467888888 99999998854 45789999997754 3679999999999988767899999999999
Q ss_pred hcchhhh
Q psy520 101 KAELHQA 107 (455)
Q Consensus 101 ~~~l~~~ 107 (455)
+..+...
T Consensus 67 ~~~~~~~ 73 (79)
T cd01670 67 EIGRRDD 73 (79)
T ss_pred HcCHHHH
Confidence 9987333
No 499
>KOG1035|consensus
Probab=97.33 E-value=0.00083 Score=74.49 Aligned_cols=195 Identities=19% Similarity=0.187 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHcCCCcceecccccccC-cce----eEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q psy520 224 LLFENEVQTLSQCKHVNLLRLLGFCNN-IMN----CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLH 298 (455)
Q Consensus 224 ~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~----~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gL~~LH 298 (455)
.....|+..+....|+|++.++.|..+ ... .+..+++...++...++. -..++..+.+.+..++..|+.|+|
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~---v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS---VGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh---ccccCHHHHHHHHHHHhhhHHHHH
Confidence 334556777888899999999987654 222 234678888888888887 346889999999999999999999
Q ss_pred cCCCCeEecCCCCC---cEEECCCCceEEc--cccccccccCCCcccceeccCCCCCCcCCcccccCCC---CChhhHHH
Q psy520 299 SLSKPIIHRDVKSA---NVLLDENFVPKLG--DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI---STKTDVFS 370 (455)
Q Consensus 299 ~~~~~iiH~Dikp~---NILl~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---s~~sDi~S 370 (455)
+ ..+.|.-+... +-..+..+...++ ||+............ ...-+..+.+||...... ....|+|.
T Consensus 304 ~--~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~----~~~~~~~~~~~e~~~~~~~~~~r~~dL~~ 377 (1351)
T KOG1035|consen 304 S--LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF----SDLLAEIRNADEDLKENTAKKSRLTDLWC 377 (1351)
T ss_pred H--hccceeEEecccccccccCccceeecchhhhcccccCCCcccch----hhcCccccccccccccccchhhhhhHHHH
Confidence 9 43444444333 4445666777777 888877665543211 122344577788664433 33469999
Q ss_pred HHHHHHHHHcCCCCCCCCchhhHHHHHHhcccchhhhcchhhcCCChhHHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q psy520 371 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 371 lGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+|..+..+..|..+-.... ....+++... .....+.+.+|+..+.++|+++.+++..
T Consensus 378 lgll~~~~~~~~~i~~~~~-------------~~~~~l~~~~--------~~~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 378 LGLLLLQLSQGEDISEKSA-------------VPVSLLDVLS--------TSELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred HHHHHhhhhhcCccccccc-------------chhhhhcccc--------chhhhhhhhhhcchhhhhccchhhhhhc
Confidence 9999999998865432211 1111111110 0024455778888889999999988763
No 500
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.30 E-value=0.0013 Score=64.42 Aligned_cols=140 Identities=19% Similarity=0.192 Sum_probs=80.1
Q ss_pred CcccccCCEEEEEEEEcC-------CcEEEEEEeecccCcCCCCcchhHhhhhhHHHHHHHHHHHHcCCCccee-ccccc
Q psy520 176 NKLGEGQFGTVYYGKLKN-------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLL-RLLGF 247 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~ 247 (455)
+.|..|-...||+....+ ++.|++|+....... .....+|..++..+....+. +++++
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~--------------~~~r~~E~~~~~~l~~~g~~P~~~~~ 69 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVEL--------------LIDRERELVVFARLSERNLGPKLYGI 69 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcc--------------eechHHHHHHHHHHHhCCCCCceEEE
Confidence 456677778999988654 478999997543211 01135677777777533333 34444
Q ss_pred ccCcceeEEEEeccCCCHHHH-----------------HhhcCCCC------CCC--HHHHHH-----------------
Q psy520 248 CNNIMNCIVYEYMCNGSLYDR-----------------LARVNNTP------PLD--SNKRYS----------------- 285 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~-----------------l~~~~~~~------~l~--~~~~~~----------------- 285 (455)
+.+ .+|++|++|.++... +++..... ..+ +.....
T Consensus 70 ~~~---~~v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (302)
T cd05156 70 FPN---GRIEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSE 146 (302)
T ss_pred eCC---CchhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchh
Confidence 332 358999988776431 11111110 011 111111
Q ss_pred ---------HHHHHHHHHHHHHc-------CCCCeEecCCCCCcEEECCC----CceEEcccccccc
Q psy520 286 ---------IALGVAEALHYLHS-------LSKPIIHRDVKSANVLLDEN----FVPKLGDFGIVKM 332 (455)
Q Consensus 286 ---------i~~~i~~gL~~LH~-------~~~~iiH~Dikp~NILl~~~----~~~kl~DFGla~~ 332 (455)
+...+...+..|-. ....++|+|+.|.|||++++ +.+.++||..|..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 147 KLLEVELSLFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 11122222334431 23578999999999999985 8899999997653
Done!