Query psy5201
Match_columns 244
No_of_seqs 197 out of 2174
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 19:56:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.9 2.7E-22 9.1E-27 144.2 8.1 74 35-108 2-75 (79)
2 2ctp_A DNAJ homolog subfamily 99.9 6.9E-22 2.4E-26 141.7 8.1 73 35-108 2-74 (78)
3 2ctr_A DNAJ homolog subfamily 99.9 7.5E-22 2.6E-26 144.9 8.3 73 35-108 2-74 (88)
4 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.1E-21 3.7E-26 140.4 8.6 69 39-108 2-70 (77)
5 2yua_A Williams-beuren syndrom 99.9 8.5E-22 2.9E-26 147.7 8.3 74 36-109 13-86 (99)
6 2ej7_A HCG3 gene; HCG3 protein 99.8 2.8E-21 9.4E-26 139.8 8.1 73 36-108 5-78 (82)
7 2dmx_A DNAJ homolog subfamily 99.8 3E-21 1E-25 142.7 8.3 73 36-108 5-78 (92)
8 1wjz_A 1700030A21RIK protein; 99.8 1.7E-21 5.7E-26 144.5 6.8 73 37-109 13-91 (94)
9 2cug_A Mkiaa0962 protein; DNAJ 99.8 3.5E-21 1.2E-25 141.3 8.2 72 36-108 13-84 (88)
10 2ctw_A DNAJ homolog subfamily 99.8 5.5E-21 1.9E-25 145.7 9.1 75 34-108 11-85 (109)
11 2ctq_A DNAJ homolog subfamily 99.8 2.9E-21 1E-25 147.9 7.4 74 35-108 15-88 (112)
12 2och_A Hypothetical protein DN 99.8 6.1E-21 2.1E-25 135.1 7.9 68 37-107 5-72 (73)
13 2lgw_A DNAJ homolog subfamily 99.8 7.5E-21 2.6E-25 142.5 7.0 69 40-108 2-71 (99)
14 2o37_A Protein SIS1; HSP40, J- 99.8 1.8E-20 6.2E-25 138.6 7.3 69 38-109 6-74 (92)
15 1bq0_A DNAJ, HSP40; chaperone, 99.8 5.2E-21 1.8E-25 144.4 4.4 71 39-109 2-72 (103)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 1.4E-20 4.9E-25 143.3 5.4 72 37-108 12-87 (109)
17 3bvo_A CO-chaperone protein HS 99.8 1.7E-19 5.6E-24 152.1 7.8 101 3-108 11-118 (207)
18 2l6l_A DNAJ homolog subfamily 99.8 2.5E-19 8.4E-24 144.6 7.1 74 36-109 6-85 (155)
19 3apq_A DNAJ homolog subfamily 99.8 5E-19 1.7E-23 148.2 8.0 69 40-108 2-70 (210)
20 1gh6_A Large T antigen; tumor 99.8 4.5E-20 1.6E-24 141.5 0.3 68 39-110 7-76 (114)
21 2ys8_A RAB-related GTP-binding 99.8 3.6E-19 1.2E-23 131.0 4.6 61 39-100 26-86 (90)
22 3hho_A CO-chaperone protein HS 99.8 8E-19 2.7E-23 144.2 6.3 71 38-108 2-79 (174)
23 1fpo_A HSC20, chaperone protei 99.7 3.3E-18 1.1E-22 140.1 5.8 68 41-108 2-76 (171)
24 2pf4_E Small T antigen; PP2A, 99.7 6.8E-19 2.3E-23 144.0 -1.5 69 37-109 8-78 (174)
25 3lz8_A Putative chaperone DNAJ 99.7 2.3E-18 7.8E-23 154.6 0.0 70 38-108 26-95 (329)
26 1iur_A KIAA0730 protein; DNAJ 99.7 7.7E-18 2.6E-22 123.4 2.8 63 37-99 13-76 (88)
27 1faf_A Large T antigen; J doma 99.7 7.4E-18 2.5E-22 121.1 1.9 62 38-103 9-72 (79)
28 1n4c_A Auxilin; four helix bun 99.6 1.6E-17 5.3E-22 136.8 0.9 64 39-102 116-182 (182)
29 3uo3_A J-type CO-chaperone JAC 99.6 4.8E-17 1.7E-21 134.3 3.7 70 36-108 7-84 (181)
30 2qwo_B Putative tyrosine-prote 99.6 5.2E-17 1.8E-21 119.6 2.4 56 40-95 33-91 (92)
31 3ag7_A Putative uncharacterize 99.6 2.6E-16 8.7E-21 119.1 3.0 58 39-97 40-104 (106)
32 2guz_A Mitochondrial import in 99.6 2.7E-16 9.2E-21 110.6 2.1 57 39-99 13-70 (71)
33 3apo_A DNAJ homolog subfamily 99.6 2E-16 6.9E-21 155.7 0.8 72 37-108 18-89 (780)
34 2y4t_A DNAJ homolog subfamily 99.0 3.1E-10 1.1E-14 101.7 5.2 66 39-104 381-449 (450)
35 2guz_B Mitochondrial import in 98.7 9.3E-09 3.2E-13 70.6 4.0 51 41-95 5-58 (65)
36 2pzi_A Probable serine/threoni 90.9 0.15 5E-06 49.0 3.7 48 37-92 626-675 (681)
37 3eff_K Voltage-gated potassium 74.7 24 0.00082 26.3 9.4 15 177-191 75-89 (139)
38 3pjs_K KCSA, voltage-gated pot 46.0 71 0.0024 24.5 7.2 8 224-231 152-159 (166)
39 1qqr_A Streptokinase domain B; 32.7 28 0.00095 26.5 2.6 33 40-72 32-64 (138)
40 2cqn_A Formin-binding protein 27.6 1.3E+02 0.0044 20.3 5.2 56 52-108 6-64 (77)
41 3pjs_K KCSA, voltage-gated pot 26.5 1.2E+02 0.004 23.2 5.5 25 210-234 131-155 (166)
42 1ug2_A 2610100B20RIK gene prod 25.6 41 0.0014 23.9 2.3 35 39-73 54-89 (95)
43 2l9u_A Receptor tyrosine-prote 22.9 1.2E+02 0.004 17.5 3.6 27 164-190 8-34 (40)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=2.7e-22 Score=144.21 Aligned_cols=74 Identities=43% Similarity=0.719 Sum_probs=69.3
Q ss_pred CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
+++...|||+||||+++++.++||++|++|++++|||++++++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 2 s~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 2 SSGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp CSSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 34567899999999999999999999999999999999987788999999999999999999999999998865
No 2
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=6.9e-22 Score=141.73 Aligned_cols=73 Identities=36% Similarity=0.647 Sum_probs=68.2
Q ss_pred CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
+++...|||+||||+++++.++||++|++|++++|||+++ .+.+.+.|+.|++||+||+||.+|..||..+..
T Consensus 2 s~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 2 SSGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp CCSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 3456789999999999999999999999999999999998 688999999999999999999999999998865
No 3
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=7.5e-22 Score=144.85 Aligned_cols=73 Identities=38% Similarity=0.697 Sum_probs=68.4
Q ss_pred CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
+++...|||+||||+++++.++||++|++|++++|||+++ ++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 2 s~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 74 (88)
T 2ctr_A 2 SSGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHS 74 (88)
T ss_dssp CSCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHH
T ss_pred CCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 3456789999999999999999999999999999999998 788999999999999999999999999999865
No 4
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.86 E-value=1.1e-21 Score=140.37 Aligned_cols=69 Identities=35% Similarity=0.604 Sum_probs=65.3
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
..|||+||||+++++.++||++|++|++++|||+++ ++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 70 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHccc
Confidence 469999999999999999999999999999999998 577899999999999999999999999998865
No 5
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=8.5e-22 Score=147.66 Aligned_cols=74 Identities=26% Similarity=0.530 Sum_probs=69.1
Q ss_pred CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201 36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ 109 (244)
Q Consensus 36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 109 (244)
.....|||+||||+++|+.++||++|++|++++|||++++++.+.+.|+.|++||+||+||.+|..||..+...
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~ 86 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSD 86 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCH
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcccc
Confidence 45578999999999999999999999999999999999877889999999999999999999999999988653
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=2.8e-21 Score=139.82 Aligned_cols=73 Identities=34% Similarity=0.587 Sum_probs=67.1
Q ss_pred CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
+....|||+||||+++++.++||++|++|++++|||+++.. +.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 44568999999999999999999999999999999999855 46788999999999999999999999998865
No 7
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=3e-21 Score=142.66 Aligned_cols=73 Identities=36% Similarity=0.607 Sum_probs=67.2
Q ss_pred CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
.....|||+||||+++++.++||++|++|++++|||+++.. +.+.+.|+.|++||+||+||.+|..||..+..
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 78 (92)
T 2dmx_A 5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCD 78 (92)
T ss_dssp CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 34567999999999999999999999999999999999855 47889999999999999999999999999865
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.84 E-value=1.7e-21 Score=144.49 Aligned_cols=73 Identities=21% Similarity=0.481 Sum_probs=67.3
Q ss_pred CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC------hHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201 37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN------PALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ 109 (244)
Q Consensus 37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~------~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 109 (244)
....|||+||||+++|+.++||++|++|++++|||+++.+ +.+.+.|+.|++||+||+||.+|..||..+..+
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~ 91 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSGP 91 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCCS
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccCC
Confidence 4578999999999999999999999999999999998743 568899999999999999999999999999763
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=3.5e-21 Score=141.28 Aligned_cols=72 Identities=35% Similarity=0.705 Sum_probs=67.2
Q ss_pred CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
.....|||+||||+++++.++||++|++|++++|||+++ ++.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 345789999999999999999999999999999999998 578899999999999999999999999998865
No 10
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=5.5e-21 Score=145.68 Aligned_cols=75 Identities=36% Similarity=0.657 Sum_probs=69.7
Q ss_pred CCCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 34 YSSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 34 ~~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
..+....|||+||||+++|+.++||++|++|++++|||++++++.+.+.|+.|++||+||+||.+|..||..+..
T Consensus 11 ~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 11 SLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp CTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred ccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 345667899999999999999999999999999999999997788999999999999999999999999998854
No 11
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=2.9e-21 Score=147.88 Aligned_cols=74 Identities=30% Similarity=0.432 Sum_probs=69.1
Q ss_pred CCCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 35 SSGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 35 ~~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
......|||+||||+++|+.++||+||++|++++|||++++++.+.+.|+.|++||+||+||.+|..||..+..
T Consensus 15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 88 (112)
T 2ctq_A 15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS 88 (112)
T ss_dssp CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence 34557899999999999999999999999999999999987788999999999999999999999999998865
No 12
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=6.1e-21 Score=135.13 Aligned_cols=68 Identities=29% Similarity=0.661 Sum_probs=62.0
Q ss_pred CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccc
Q psy5201 37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLN 107 (244)
Q Consensus 37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 107 (244)
....|||+||||+++++.++||++|++|++++|||++++. .+.|+.|++||++|+||.+|..||..|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 3567999999999999999999999999999999999743 5789999999999999999999999874
No 13
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.83 E-value=7.5e-21 Score=142.52 Aligned_cols=69 Identities=39% Similarity=0.641 Sum_probs=64.5
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
.|||+||||+++|+.++||++|++|++++|||+++.. +.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~ 71 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRE 71 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 4899999999999999999999999999999999855 46889999999999999999999999998755
No 14
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.8e-20 Score=138.55 Aligned_cols=69 Identities=26% Similarity=0.546 Sum_probs=63.7
Q ss_pred CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201 38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ 109 (244)
Q Consensus 38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 109 (244)
...|||+||||+++++.++||++|++|++++|||+++++ .+.|+.|++||+||+||.+|..||..+...
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 74 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEA 74 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence 467999999999999999999999999999999999754 469999999999999999999999988653
No 15
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.82 E-value=5.2e-21 Score=144.35 Aligned_cols=71 Identities=34% Similarity=0.638 Sum_probs=66.9
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201 39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ 109 (244)
Q Consensus 39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 109 (244)
..|||+||||+++++.++||++|++|++++|||++++++.+.+.|+.|++||+||+||.+|..||..+...
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 46999999999999999999999999999999999876888999999999999999999999999998663
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.81 E-value=1.4e-20 Score=143.28 Aligned_cols=72 Identities=25% Similarity=0.472 Sum_probs=66.2
Q ss_pred CCccCcccccccCCCC-CHHHHHHHHHHHHHhhCCCCCCC---ChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 37 GQDHTHYEILELERNC-SPKEIRSAFIRLSKQFHPDKNPS---NPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 37 ~~~~~~Y~iLgv~~~a-~~~eIk~ay~~l~~~~HPD~~~~---~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
....|||+||||+++| +.++||+||++|++++|||++++ .+.+.+.|+.|++||+||+||.+|..||..+..
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 3468999999999999 99999999999999999999984 267889999999999999999999999998854
No 17
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.78 E-value=1.7e-19 Score=152.08 Aligned_cols=101 Identities=15% Similarity=0.199 Sum_probs=75.3
Q ss_pred cccccccCCCccCccchhhhhhcccccccccCCCCCccCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChH--
Q psy5201 3 SHLCSCMKTNTFNSKSAFFLFNRTGLCCNQRYSSGQDHTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPA-- 78 (244)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~-- 78 (244)
..||.|.....-.....++|..+ ....+.....|||+||||+++ ++.++||++||+|++++|||++++.+.
T Consensus 11 ~~Cw~C~~~~~~~~~~~~fC~~c-----~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e 85 (207)
T 3bvo_A 11 PRCWNCGGPWGPGREDRFFCPQC-----RALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTE 85 (207)
T ss_dssp CBCSSSCCBCCSSCSCCCBCTTT-----CCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHH
T ss_pred CCCCCCCCCcccccccccccccc-----cccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence 46889976421111122222222 222233457899999999986 799999999999999999999985532
Q ss_pred ---HHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 79 ---LHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 79 ---~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
+.+.|+.|++||+||+||.+|..||..+.+
T Consensus 86 ~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G 118 (207)
T 3bvo_A 86 KDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHG 118 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhcC
Confidence 567899999999999999999999987754
No 18
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=2.5e-19 Score=144.56 Aligned_cols=74 Identities=22% Similarity=0.475 Sum_probs=66.8
Q ss_pred CCCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh------HHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201 36 SGQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP------ALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ 109 (244)
Q Consensus 36 ~~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~------~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 109 (244)
.....|||+||||+++++.++||+||++|++++|||+++..+ .+.+.|..|++||+||+||.+|+.||..+...
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~ 85 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCED 85 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchh
Confidence 455689999999999999999999999999999999998653 36789999999999999999999999988653
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.77 E-value=5e-19 Score=148.17 Aligned_cols=69 Identities=42% Similarity=0.779 Sum_probs=66.1
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
.|||+||||+++|+.++||+|||+|++++|||++++++.+.++|+.|++||++|+||.+|+.||..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~ 70 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK 70 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccc
Confidence 489999999999999999999999999999999987888999999999999999999999999998865
No 20
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.76 E-value=4.5e-20 Score=141.54 Aligned_cols=68 Identities=25% Similarity=0.371 Sum_probs=61.7
Q ss_pred ccCcccccccCCCCCH--HHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccccc
Q psy5201 39 DHTHYEILELERNCSP--KEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQT 110 (244)
Q Consensus 39 ~~~~Y~iLgv~~~a~~--~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 110 (244)
..++|+||||+++|+. ++||+|||+|++++|||++++ .++|+.|++||+||+||.+|+.||.++..|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~ 76 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWD 76 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhcccccc
Confidence 4689999999999998 999999999999999999874 4789999999999999999999998765543
No 21
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=3.6e-19 Score=131.05 Aligned_cols=61 Identities=23% Similarity=0.378 Sum_probs=57.5
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHH
Q psy5201 39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRR 100 (244)
Q Consensus 39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~ 100 (244)
..|||+||||+++|+.++||++|++|+++||||+++ ++.+.+.|+.|++||++|+||.+|.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCccccc
Confidence 479999999999999999999999999999999998 6788999999999999999998774
No 22
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.75 E-value=8e-19 Score=144.23 Aligned_cols=71 Identities=28% Similarity=0.400 Sum_probs=64.0
Q ss_pred CccCcccccccCCCCC--HHHHHHHHHHHHHhhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 38 QDHTHYEILELERNCS--PKEIRSAFIRLSKQFHPDKNPSNPA-----LHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 38 ~~~~~Y~iLgv~~~a~--~~eIk~ay~~l~~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
...|||+||||+++++ .++||++|++|++++|||++++.+. +.+.|..|++||+||+||.+|..||..+.+
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g 79 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQG 79 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTT
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHccC
Confidence 3579999999999987 9999999999999999999986643 678999999999999999999999998865
No 23
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.72 E-value=3.3e-18 Score=140.13 Aligned_cols=68 Identities=24% Similarity=0.348 Sum_probs=62.8
Q ss_pred CcccccccCCCC--CHHHHHHHHHHHHHhhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 41 THYEILELERNC--SPKEIRSAFIRLSKQFHPDKNPSNPA-----LHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 41 ~~Y~iLgv~~~a--~~~eIk~ay~~l~~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
|||+||||++++ +..+||++|++|+++||||++++.+. +.+.|..|++||+||+||.+|..||..+.+
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g 76 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHG 76 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcC
Confidence 799999999999 99999999999999999999986543 567999999999999999999999998865
No 24
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.70 E-value=6.8e-19 Score=144.00 Aligned_cols=69 Identities=25% Similarity=0.365 Sum_probs=60.1
Q ss_pred CCccCcccccccCCCCC--HHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhccccc
Q psy5201 37 GQDHTHYEILELERNCS--PKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNLQ 109 (244)
Q Consensus 37 ~~~~~~Y~iLgv~~~a~--~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 109 (244)
....|+|+||||+++|+ .++||+|||++++++|||++++ .++|+.|++||+||+||.+|+.||..+..+
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~~w 78 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFW 78 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGGCC
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCCcc
Confidence 34579999999999998 6999999999999999999874 378999999999999999999999998654
No 25
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.68 E-value=2.3e-18 Score=154.56 Aligned_cols=70 Identities=31% Similarity=0.537 Sum_probs=0.0
Q ss_pred CccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 38 QDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 38 ~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
...|||+||||+++|+.++||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||.++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 3579999999999999999999999999999999998 568899999999999999999999999998543
No 26
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.68 E-value=7.7e-18 Score=123.37 Aligned_cols=63 Identities=22% Similarity=0.276 Sum_probs=57.4
Q ss_pred CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHH
Q psy5201 37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN-PALHDKFVKLNEAYSILNDMDRR 99 (244)
Q Consensus 37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~vL~dp~~R 99 (244)
....++|+||||+++|+.++||+||++|+++||||+++++ +.+.+.|+.|++||++|+|...|
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 4457999999999999999999999999999999999866 45889999999999999988665
No 27
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.68 E-value=7.4e-18 Score=121.09 Aligned_cols=62 Identities=21% Similarity=0.311 Sum_probs=56.1
Q ss_pred CccCcccccccCCC--CCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy5201 38 QDHTHYEILELERN--CSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYD 103 (244)
Q Consensus 38 ~~~~~Y~iLgv~~~--a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD 103 (244)
...++|+||||+++ ++.++||+||++|++++|||+++ + .+.|++|++||++|+|+.+|..++
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~-~---~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C---HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 34689999999999 99999999999999999999986 3 578999999999999999998743
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.65 E-value=1.6e-17 Score=136.78 Aligned_cols=64 Identities=20% Similarity=0.445 Sum_probs=58.8
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHHH
Q psy5201 39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPA---LHDKFVKLNEAYSILNDMDRRRNY 102 (244)
Q Consensus 39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~---~~~~f~~i~~Ay~vL~dp~~R~~Y 102 (244)
..|+|+||||+++|+.++||+||+++++++|||++++.+. +.+.|+.|++||+||+||.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999999986543 789999999999999999998765
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.64 E-value=4.8e-17 Score=134.30 Aligned_cols=70 Identities=29% Similarity=0.404 Sum_probs=62.7
Q ss_pred CCCccCccccc------ccCC-CCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcc-c
Q psy5201 36 SGQDHTHYEIL------ELER-NCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASL-N 107 (244)
Q Consensus 36 ~~~~~~~Y~iL------gv~~-~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~-~ 107 (244)
.....|||+|| |+++ +++.++||++||+|++++|||++++ +.+.|..|++||+||+||.+|..||..+ .
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~~ 83 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKLLR 83 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHHHh
Confidence 34568999999 4665 8999999999999999999999984 6788999999999999999999999987 4
Q ss_pred c
Q psy5201 108 L 108 (244)
Q Consensus 108 ~ 108 (244)
+
T Consensus 84 g 84 (181)
T 3uo3_A 84 N 84 (181)
T ss_dssp C
T ss_pred C
Confidence 4
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.63 E-value=5.2e-17 Score=119.61 Aligned_cols=56 Identities=20% Similarity=0.418 Sum_probs=51.7
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCCh---HHHHHHHHHHHHHHHcCC
Q psy5201 40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNP---ALHDKFVKLNEAYSILND 95 (244)
Q Consensus 40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~---~~~~~f~~i~~Ay~vL~d 95 (244)
.++|++|||+++|+.++||+|||+++++||||++++++ .+.+.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58899999999999999999999999999999998654 378899999999999974
No 31
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=2.6e-16 Score=119.13 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=51.9
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCC---Ch----HHHHHHHHHHHHHHHcCChh
Q psy5201 39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPS---NP----ALHDKFVKLNEAYSILNDMD 97 (244)
Q Consensus 39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~---~~----~~~~~f~~i~~Ay~vL~dp~ 97 (244)
..|||+|||++. |+.++||+|||++++++|||++++ ++ .+.++|+.|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 999999999999999999999863 11 46889999999999999985
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.7e-16 Score=110.62 Aligned_cols=57 Identities=23% Similarity=0.288 Sum_probs=51.1
Q ss_pred ccCcccccccCC-CCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHH
Q psy5201 39 DHTHYEILELER-NCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRR 99 (244)
Q Consensus 39 ~~~~Y~iLgv~~-~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R 99 (244)
..++|+||||++ +++.++||++|++|++++|||+++ + .+.|+.|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhc
Confidence 468999999999 799999999999999999999964 3 36899999999999988654
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.57 E-value=2e-16 Score=155.69 Aligned_cols=72 Identities=42% Similarity=0.769 Sum_probs=40.8
Q ss_pred CCccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHHhcccc
Q psy5201 37 GQDHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILNDMDRRRNYDASLNL 108 (244)
Q Consensus 37 ~~~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 108 (244)
..+.|||+||||+++|+.++||+|||+|++++|||++++++.+.++|+.|++||++|+||.+|+.||.++..
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~ 89 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK 89 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC---
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccc
Confidence 456899999999999999999999999999999999987788999999999999999999999999998865
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.98 E-value=3.1e-10 Score=101.71 Aligned_cols=66 Identities=30% Similarity=0.569 Sum_probs=56.0
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHhhCCCCCCCC---hHHHHHHHHHHHHHHHcCChhHHHHHHh
Q psy5201 39 DHTHYEILELERNCSPKEIRSAFIRLSKQFHPDKNPSN---PALHDKFVKLNEAYSILNDMDRRRNYDA 104 (244)
Q Consensus 39 ~~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~~~~~---~~~~~~f~~i~~Ay~vL~dp~~R~~YD~ 104 (244)
..++|++||+.+.++.++|+++|+++++++|||+.+.. +.+.+.|+.|.+||++|+||.+|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 34899999999999999999999999999999998743 3478899999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.71 E-value=9.3e-09 Score=70.56 Aligned_cols=51 Identities=20% Similarity=0.126 Sum_probs=44.3
Q ss_pred CcccccccCCC---CCHHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHHcCC
Q psy5201 41 THYEILELERN---CSPKEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSILND 95 (244)
Q Consensus 41 ~~Y~iLgv~~~---a~~~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~vL~d 95 (244)
.-|+||||+++ ++.++|+++|++|....|||+.+ + .-....|++|.++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S---~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-S---FYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-C---HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHHH
Confidence 45889999999 99999999999999999999975 3 3556889999999853
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.85 E-value=0.15 Score=49.00 Aligned_cols=48 Identities=8% Similarity=0.169 Sum_probs=38.6
Q ss_pred CCccCcccccccCCCCCH--HHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHHHH
Q psy5201 37 GQDHTHYEILELERNCSP--KEIRSAFIRLSKQFHPDKNPSNPALHDKFVKLNEAYSI 92 (244)
Q Consensus 37 ~~~~~~Y~iLgv~~~a~~--~eIk~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~v 92 (244)
...+++|.|||++.+... .+|+++||++++..+++ .+++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 445679999999877655 77999999999965443 4789999999886
No 37
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=74.71 E-value=24 Score=26.32 Aligned_cols=15 Identities=7% Similarity=-0.166 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHhhh
Q psy5201 177 ATGALGLQILAVQYS 191 (244)
Q Consensus 177 ~~~g~~~~~~~~~~~ 191 (244)
+++|+++....+...
T Consensus 75 ~~~G~~~~~~~~~~i 89 (139)
T 3eff_K 75 MVAGITSFGLVTAAL 89 (139)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333433333333333
No 38
>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A
Probab=45.97 E-value=71 Score=24.55 Aligned_cols=8 Identities=38% Similarity=0.792 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q psy5201 224 ENIDRFAK 231 (244)
Q Consensus 224 ~q~e~~~~ 231 (244)
++++.+++
T Consensus 152 ~~l~~le~ 159 (166)
T 3pjs_K 152 ERFDRLER 159 (166)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444433
No 39
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=32.68 E-value=28 Score=26.51 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=28.9
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHhhCCCC
Q psy5201 40 HTHYEILELERNCSPKEIRSAFIRLSKQFHPDK 72 (244)
Q Consensus 40 ~~~Y~iLgv~~~a~~~eIk~ay~~l~~~~HPD~ 72 (244)
.-++..|.|....+.+|++++=..+..++|||=
T Consensus 32 ~~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 32 TKLLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp CEEEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhhhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 345788888899999999999999999999983
No 40
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=27.63 E-value=1.3e+02 Score=20.29 Aligned_cols=56 Identities=23% Similarity=0.334 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCCC--hHHHHHHHHHHHHHHHcCCh-hHHHHHHhcccc
Q psy5201 52 CSPKEIRSAFIRLSKQFHPDKNPSN--PALHDKFVKLNEAYSILNDM-DRRRNYDASLNL 108 (244)
Q Consensus 52 a~~~eIk~ay~~l~~~~HPD~~~~~--~~~~~~f~~i~~Ay~vL~dp-~~R~~YD~~~~~ 108 (244)
.-...++.+|+.+.+...|...... ..+..+|..-. +|..+.+. .++..|+.+...
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~~ 64 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMHV 64 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHHH
Confidence 3467789999999999988877655 45666666665 79999775 455567766643
No 41
>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A
Probab=26.50 E-value=1.2e+02 Score=23.23 Aligned_cols=25 Identities=8% Similarity=0.228 Sum_probs=11.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHH
Q psy5201 210 LMNARNDAKKYDLQENIDRFAKRYQ 234 (244)
Q Consensus 210 ~~~~r~~ar~~~~~~q~e~~~~~~~ 234 (244)
..+....+.....+.+++.+.+++.
T Consensus 131 ~~~~~~~~~~~~l~~~i~~L~~~l~ 155 (166)
T 3pjs_K 131 FVRHSEKAAEEAYTRTTRALHERFD 155 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444555555554443
No 42
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=25.61 E-value=41 Score=23.89 Aligned_cols=35 Identities=20% Similarity=0.403 Sum_probs=24.5
Q ss_pred ccCcccccccC-CCCCHHHHHHHHHHHHHhhCCCCC
Q psy5201 39 DHTHYEILELE-RNCSPKEIRSAFIRLSKQFHPDKN 73 (244)
Q Consensus 39 ~~~~Y~iLgv~-~~a~~~eIk~ay~~l~~~~HPD~~ 73 (244)
..+.+.+|--. .+-++++|+.+|++|.+++|--..
T Consensus 54 s~~tFa~iA~~L~Nks~nqV~~RFq~Lm~Lf~~~~~ 89 (95)
T 1ug2_A 54 QPHTFSVISQQLGNKTPVEVSHRFRELMQLFHTACE 89 (95)
T ss_dssp CTTTHHHHHHHHSSCCHHHHHHHHHHHHHHHHHCSS
T ss_pred ChhHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhc
Confidence 34445444332 257899999999999999986543
No 43
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=22.95 E-value=1.2e+02 Score=17.49 Aligned_cols=27 Identities=4% Similarity=-0.116 Sum_probs=18.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy5201 164 LSKATLVMLLIGVATGALGLQILAVQY 190 (244)
Q Consensus 164 ~s~~~~v~~~~~~~~~g~~~~~~~~~~ 190 (244)
+....++++.+++++.|..+.|++-++
T Consensus 8 malt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 8 MALTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCceeEEEcccc
Confidence 344556777777888888777776554
Done!