Query psy5204
Match_columns 209
No_of_seqs 133 out of 683
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 20:00:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5204.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5204hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eln_A Cysteine dioxygenase ty 100.0 2.9E-54 9.9E-59 356.5 20.6 186 16-208 4-189 (200)
2 3uss_A Putative uncharacterize 100.0 1.2E-44 4.2E-49 300.8 17.8 176 19-208 5-188 (211)
3 2gm6_A Cysteine dioxygenase ty 100.0 1.6E-43 5.4E-48 294.0 17.9 177 18-208 10-194 (208)
4 3eqe_A Putative cystein deoxyg 100.0 8.6E-43 2.9E-47 281.4 16.4 157 26-194 12-169 (171)
5 3h8u_A Uncharacterized conserv 98.9 2.1E-08 7E-13 74.7 12.4 103 61-183 18-120 (125)
6 1v70_A Probable antibiotics sy 98.8 1.6E-07 5.5E-12 66.6 12.0 94 65-179 11-104 (105)
7 1y9q_A Transcriptional regulat 98.6 3.1E-06 1E-10 67.6 16.7 127 31-179 41-180 (192)
8 3i7d_A Sugar phosphate isomera 98.6 7.9E-07 2.7E-11 69.9 12.2 116 70-206 28-151 (163)
9 2fqp_A Hypothetical protein BP 98.5 1E-06 3.4E-11 63.0 11.1 76 80-173 15-90 (97)
10 2oa2_A BH2720 protein; 1017534 98.4 4.2E-06 1.4E-10 64.3 12.9 95 73-182 34-128 (148)
11 2q30_A Uncharacterized protein 98.4 4.4E-06 1.5E-10 60.0 11.5 94 64-179 15-109 (110)
12 3lag_A Uncharacterized protein 98.4 6E-07 2E-11 65.0 6.6 85 72-175 8-92 (98)
13 2gu9_A Tetracenomycin polyketi 98.4 2.5E-06 8.7E-11 61.3 10.0 81 80-180 18-100 (113)
14 4e2g_A Cupin 2 conserved barre 98.4 5.3E-06 1.8E-10 61.4 11.7 88 70-181 30-117 (126)
15 3l2h_A Putative sugar phosphat 98.3 5.8E-06 2E-10 64.2 11.7 102 72-193 33-137 (162)
16 1yhf_A Hypothetical protein SP 98.3 1.2E-05 4.2E-10 58.3 11.6 80 65-165 23-102 (115)
17 2bnm_A Epoxidase; oxidoreducta 98.3 6.4E-05 2.2E-09 59.9 16.8 130 30-176 39-197 (198)
18 2ozi_A Hypothetical protein RP 98.3 1.3E-06 4.6E-11 63.3 6.2 82 75-174 10-91 (98)
19 3kgz_A Cupin 2 conserved barre 98.2 1.6E-05 5.4E-10 62.2 11.7 90 71-181 31-121 (156)
20 1lr5_A Auxin binding protein 1 98.2 1E-05 3.4E-10 63.0 10.3 98 80-188 38-135 (163)
21 3ht1_A REMF protein; cupin fol 98.2 1.6E-05 5.5E-10 59.9 11.0 93 71-182 25-119 (145)
22 3h7j_A Bacilysin biosynthesis 98.2 6E-06 2E-10 68.7 9.2 82 81-183 143-225 (243)
23 2pfw_A Cupin 2, conserved barr 98.2 2.8E-05 9.6E-10 56.4 11.0 89 69-181 21-109 (116)
24 3es1_A Cupin 2, conserved barr 98.1 2E-05 6.7E-10 63.0 10.6 81 80-181 76-156 (172)
25 2b8m_A Hypothetical protein MJ 98.1 5.2E-05 1.8E-09 55.3 12.2 89 71-182 17-106 (117)
26 3jzv_A Uncharacterized protein 98.1 3.4E-05 1.2E-09 61.0 11.3 88 71-179 40-128 (166)
27 3fjs_A Uncharacterized protein 98.1 2.3E-05 7.7E-10 57.7 9.5 74 70-165 25-98 (114)
28 3ibm_A Cupin 2, conserved barr 98.0 8.9E-05 3.1E-09 58.3 12.5 80 81-180 54-133 (167)
29 1x82_A Glucose-6-phosphate iso 98.0 5.8E-05 2E-09 60.7 11.5 87 80-181 64-158 (190)
30 1fi2_A Oxalate oxidase, germin 98.0 5.4E-05 1.8E-09 61.2 10.5 89 81-181 70-158 (201)
31 3cew_A Uncharacterized cupin p 98.0 3.1E-05 1.1E-09 57.3 8.4 91 69-179 10-103 (125)
32 2opk_A Hypothetical protein; p 98.0 0.00014 4.7E-09 53.4 11.7 88 71-179 21-111 (112)
33 1vj2_A Novel manganese-contain 98.0 4.2E-05 1.4E-09 56.9 8.9 89 70-179 33-123 (126)
34 2f4p_A Hypothetical protein TM 97.9 0.00017 5.7E-09 55.4 12.1 79 80-179 45-124 (147)
35 1o4t_A Putative oxalate decarb 97.9 8.4E-05 2.9E-09 55.9 9.6 85 69-173 39-127 (133)
36 1dgw_A Canavalin; duplicated s 97.9 4.9E-05 1.7E-09 60.5 8.7 83 81-179 39-121 (178)
37 2ozj_A Cupin 2, conserved barr 97.9 0.00019 6.6E-09 52.0 11.2 78 67-165 23-100 (114)
38 3rns_A Cupin 2 conserved barre 97.8 0.00024 8.2E-09 58.4 11.8 91 60-175 15-106 (227)
39 4i4a_A Similar to unknown prot 97.7 0.00035 1.2E-08 51.4 10.6 78 80-178 31-108 (128)
40 2xlg_A SLL1785 protein, CUCA; 97.7 0.0001 3.4E-09 61.7 8.4 96 79-176 39-137 (239)
41 3rns_A Cupin 2 conserved barre 97.7 0.00039 1.3E-08 57.1 11.8 81 64-165 135-216 (227)
42 3h7j_A Bacilysin biosynthesis 97.7 0.00025 8.5E-09 58.8 10.6 82 71-175 24-106 (243)
43 1j58_A YVRK protein; cupin, de 97.7 0.00022 7.6E-09 62.7 10.8 95 71-180 242-339 (385)
44 2vpv_A Protein MIF2, MIF2P; nu 97.6 0.00034 1.2E-08 55.4 9.8 77 80-177 85-163 (166)
45 1sfn_A Conserved hypothetical 97.6 0.00065 2.2E-08 56.5 11.4 97 58-176 138-237 (246)
46 2q1z_B Anti-sigma factor CHRR, 97.6 0.00099 3.4E-08 53.8 12.2 80 70-175 113-192 (195)
47 4b29_A Dimethylsulfoniopropion 97.6 0.0011 3.7E-08 54.6 12.3 117 41-179 80-207 (217)
48 3cjx_A Protein of unknown func 97.6 0.00069 2.3E-08 53.5 10.7 98 70-191 29-128 (165)
49 2vqa_A SLL1358 protein, MNCA; 97.6 0.00044 1.5E-08 60.1 10.3 84 82-180 233-316 (361)
50 1sq4_A GLXB, glyoxylate-induce 97.5 0.00073 2.5E-08 57.4 11.0 73 80-173 65-139 (278)
51 3bu7_A Gentisate 1,2-dioxygena 97.5 0.0016 5.5E-08 58.2 13.5 111 43-181 255-372 (394)
52 1uij_A Beta subunit of beta co 97.5 0.00026 8.9E-09 63.7 8.2 83 81-179 47-129 (416)
53 2ea7_A 7S globulin-1; beta bar 97.5 0.0003 1E-08 63.7 8.6 83 81-179 59-141 (434)
54 1rc6_A Hypothetical protein YL 97.5 0.00036 1.2E-08 58.3 8.2 88 72-180 167-256 (261)
55 1rc6_A Hypothetical protein YL 97.4 0.0005 1.7E-08 57.5 8.8 76 80-175 56-132 (261)
56 2vqa_A SLL1358 protein, MNCA; 97.4 0.0008 2.7E-08 58.5 10.4 85 81-180 50-134 (361)
57 2cav_A Protein (canavalin); vi 97.4 0.00041 1.4E-08 63.0 8.7 93 81-189 84-178 (445)
58 2o8q_A Hypothetical protein; c 97.4 0.00079 2.7E-08 50.1 8.8 81 80-180 38-120 (134)
59 3lwc_A Uncharacterized protein 97.4 0.0014 4.7E-08 48.7 9.8 86 71-179 27-113 (119)
60 1y3t_A Hypothetical protein YX 97.4 0.00079 2.7E-08 57.6 9.7 79 80-179 43-121 (337)
61 4e2q_A Ureidoglycine aminohydr 97.4 0.00074 2.5E-08 57.4 9.0 85 72-179 58-143 (266)
62 3ebr_A Uncharacterized RMLC-li 97.3 0.00093 3.2E-08 52.4 8.7 97 58-178 17-117 (159)
63 1sef_A Conserved hypothetical 97.3 0.00081 2.8E-08 56.7 8.2 74 80-173 59-133 (274)
64 4h7l_A Uncharacterized protein 97.3 0.0011 3.7E-08 52.1 8.2 90 67-181 30-121 (157)
65 1sef_A Conserved hypothetical 97.2 0.003 1E-07 53.2 11.5 88 69-177 166-256 (274)
66 3bb6_A Uncharacterized protein 97.2 0.0027 9.3E-08 48.0 9.5 77 91-179 22-102 (127)
67 3c3v_A Arachin ARAH3 isoform; 97.1 0.0017 5.7E-08 59.9 8.8 83 82-179 371-453 (510)
68 1juh_A Quercetin 2,3-dioxygena 97.1 0.0057 2E-07 53.4 11.8 84 80-180 45-131 (350)
69 1fxz_A Glycinin G1; proglycini 97.1 0.0018 6.3E-08 59.2 8.7 83 82-179 337-419 (476)
70 1sq4_A GLXB, glyoxylate-induce 97.0 0.0055 1.9E-07 51.9 10.9 78 80-179 188-266 (278)
71 1y3t_A Hypothetical protein YX 97.0 0.0053 1.8E-07 52.4 10.8 79 81-180 216-294 (337)
72 2d40_A Z3393, putative gentisa 97.0 0.00096 3.3E-08 58.6 6.2 80 81-180 98-177 (354)
73 2o1q_A Putative acetyl/propion 97.0 0.0046 1.6E-07 47.4 9.1 99 71-194 31-131 (145)
74 3nw4_A Gentisate 1,2-dioxygena 96.8 0.0024 8.3E-08 56.5 7.3 81 81-181 101-181 (368)
75 2pyt_A Ethanolamine utilizatio 96.8 0.005 1.7E-07 46.6 8.1 92 63-179 35-128 (133)
76 2d5f_A Glycinin A3B4 subunit; 96.7 0.0037 1.3E-07 57.4 7.9 83 83-180 367-449 (493)
77 1j58_A YVRK protein; cupin, de 96.6 0.0059 2E-07 53.5 8.1 83 81-180 77-159 (385)
78 4e2q_A Ureidoglycine aminohydr 96.6 0.027 9.4E-07 47.6 11.8 81 71-172 173-255 (266)
79 3bu7_A Gentisate 1,2-dioxygena 96.5 0.0098 3.4E-07 53.1 8.9 77 80-176 120-197 (394)
80 3dl3_A Tellurite resistance pr 96.5 0.027 9.2E-07 42.1 9.8 73 102-187 36-109 (119)
81 2e9q_A 11S globulin subunit be 96.4 0.01 3.5E-07 54.0 8.7 83 82-179 321-403 (459)
82 3d82_A Cupin 2, conserved barr 96.3 0.013 4.4E-07 40.7 6.8 63 82-165 30-92 (102)
83 3kgl_A Cruciferin; 11S SEED gl 96.2 0.016 5.3E-07 52.9 8.8 83 82-179 322-404 (466)
84 1sfn_A Conserved hypothetical 96.2 0.03 1E-06 46.3 9.8 63 80-164 47-109 (246)
85 3bcw_A Uncharacterized protein 96.1 0.036 1.2E-06 41.3 9.0 80 66-165 32-111 (123)
86 4axo_A EUTQ, ethanolamine util 96.1 0.046 1.6E-06 42.4 9.9 86 71-181 53-139 (151)
87 2i45_A Hypothetical protein; n 96.1 0.012 4.1E-07 41.8 5.8 66 88-175 33-98 (107)
88 2y0o_A Probable D-lyxose ketol 96.0 0.068 2.3E-06 42.5 10.5 104 71-181 40-156 (175)
89 3s7i_A Allergen ARA H 1, clone 95.8 0.026 8.8E-07 50.7 8.2 73 81-169 42-114 (418)
90 2d40_A Z3393, putative gentisa 95.7 0.041 1.4E-06 48.1 8.9 71 82-175 267-337 (354)
91 3ksc_A LEGA class, prolegumin; 95.6 0.052 1.8E-06 49.8 9.4 82 83-179 358-439 (496)
92 2phl_A Phaseolin; plant SEED s 95.6 0.031 1E-06 49.9 7.7 83 81-179 50-138 (397)
93 3fz3_A Prunin; TREE NUT allerg 95.6 0.025 8.6E-07 52.2 7.2 79 82-176 393-471 (531)
94 3st7_A Capsular polysaccharide 95.4 0.35 1.2E-05 41.3 13.5 84 82-181 271-358 (369)
95 2vec_A YHAK, pirin-like protei 95.4 0.065 2.2E-06 45.0 8.5 71 89-176 70-141 (256)
96 3bal_A Acetylacetone-cleaving 95.4 0.075 2.6E-06 41.3 8.2 101 70-194 32-133 (153)
97 2phl_A Phaseolin; plant SEED s 95.2 0.029 9.8E-07 50.1 6.1 79 80-165 236-314 (397)
98 3o14_A Anti-ecfsigma factor, C 94.9 0.12 4E-06 42.4 8.6 71 69-163 27-99 (223)
99 1tq5_A Protein YHHW; bicupin, 94.9 0.1 3.6E-06 43.3 8.4 76 89-181 47-123 (242)
100 3qac_A 11S globulin SEED stora 94.8 0.19 6.6E-06 45.7 10.5 96 82-180 49-168 (465)
101 2e9q_A 11S globulin subunit be 94.7 0.11 3.9E-06 47.1 8.6 95 82-179 62-164 (459)
102 1fxz_A Glycinin G1; proglycini 94.6 0.16 5.3E-06 46.4 9.5 96 82-180 47-151 (476)
103 3qac_A 11S globulin SEED stora 94.6 0.12 4.1E-06 47.0 8.5 82 83-179 323-404 (465)
104 2yu1_A JMJC domain-containing 94.2 0.081 2.8E-06 48.0 6.5 97 81-179 194-303 (451)
105 2d5f_A Glycinin A3B4 subunit; 94.1 0.26 9E-06 45.0 9.8 95 82-179 44-150 (493)
106 2ea7_A 7S globulin-1; beta bar 93.5 0.13 4.4E-06 46.3 6.5 80 83-165 266-347 (434)
107 1uij_A Beta subunit of beta co 93.5 0.16 5.4E-06 45.5 7.0 81 82-164 248-330 (416)
108 3ksc_A LEGA class, prolegumin; 93.1 0.49 1.7E-05 43.4 9.8 97 81-180 44-148 (496)
109 3c3v_A Arachin ARAH3 isoform; 93.0 0.55 1.9E-05 43.1 10.0 97 81-180 46-164 (510)
110 1juh_A Quercetin 2,3-dioxygena 92.9 0.55 1.9E-05 40.7 9.4 65 82-165 248-315 (350)
111 1o5u_A Novel thermotoga mariti 92.8 0.38 1.3E-05 34.2 6.9 58 87-165 35-92 (101)
112 2cav_A Protein (canavalin); vi 92.7 0.25 8.7E-06 44.5 7.1 81 82-165 280-360 (445)
113 4gjz_A Lysine-specific demethy 92.2 1.1 3.7E-05 35.5 9.8 82 89-175 130-232 (235)
114 3nw4_A Gentisate 1,2-dioxygena 92.1 0.61 2.1E-05 41.1 8.7 66 80-165 276-341 (368)
115 2p17_A Pirin-like protein; GK1 91.3 1.5 5.2E-05 36.9 10.1 71 89-177 45-116 (277)
116 3kgl_A Cruciferin; 11S SEED gl 90.5 1.7 5.9E-05 39.4 10.2 96 82-180 42-183 (466)
117 3o14_A Anti-ecfsigma factor, C 90.3 0.44 1.5E-05 38.9 5.7 44 70-116 134-177 (223)
118 1vrb_A Putative asparaginyl hy 90.1 2.4 8.2E-05 36.6 10.5 81 92-175 150-251 (342)
119 3k3o_A PHF8, PHD finger protei 89.9 0.38 1.3E-05 42.5 5.1 95 82-179 146-254 (371)
120 3kv4_A PHD finger protein 8; e 89.8 0.86 2.9E-05 41.2 7.5 96 82-179 230-338 (447)
121 3pua_A GRC5, PHD finger protei 89.3 0.59 2E-05 41.5 6.0 95 82-179 173-281 (392)
122 1vr3_A Acireductone dioxygenas 88.9 5.7 0.00019 31.6 11.0 69 96-180 97-165 (191)
123 2arc_A ARAC, arabinose operon 88.7 3.7 0.00013 30.1 9.4 62 97-178 32-95 (164)
124 3kmh_A D-lyxose isomerase; cup 88.4 4.1 0.00014 33.8 10.0 98 82-180 105-211 (246)
125 3d8c_A Hypoxia-inducible facto 88.3 3.4 0.00012 35.7 10.1 91 87-179 187-299 (349)
126 3kv5_D JMJC domain-containing 87.7 1.8 6.3E-05 39.4 8.3 95 83-179 266-373 (488)
127 1yfu_A 3-hydroxyanthranilate-3 87.5 1.3 4.3E-05 35.0 6.2 67 82-164 34-100 (174)
128 3s7i_A Allergen ARA H 1, clone 87.4 1.4 4.9E-05 39.3 7.3 82 83-165 263-356 (418)
129 1j1l_A Pirin; beta sandwich, c 87.1 1.5 5.1E-05 37.3 6.9 71 89-177 46-118 (290)
130 3d0j_A Uncharacterized protein 86.5 5 0.00017 30.5 8.8 86 66-165 11-100 (140)
131 1dgw_X Canavalin; duplicated s 86.2 0.67 2.3E-05 31.7 3.5 40 81-120 34-73 (79)
132 2pa7_A DTDP-6-deoxy-3,4-keto-h 84.4 6.6 0.00023 29.7 8.7 79 87-182 39-118 (141)
133 3myx_A Uncharacterized protein 83.8 12 0.00041 30.8 10.7 76 66-164 30-106 (238)
134 1zvf_A 3-hydroxyanthranilate 3 83.0 4.3 0.00015 32.1 7.2 75 74-163 28-102 (176)
135 2xdv_A MYC-induced nuclear ant 82.4 12 0.00039 33.6 10.9 81 91-175 147-231 (442)
136 3kv9_A JMJC domain-containing 81.5 2.5 8.5E-05 37.6 6.0 95 83-179 175-282 (397)
137 1zrr_A E-2/E-2' protein; nicke 80.2 2 6.7E-05 33.9 4.5 67 96-179 93-159 (179)
138 3k2o_A Bifunctional arginine d 75.8 9.8 0.00034 32.8 8.0 92 85-178 174-292 (336)
139 4diq_A Lysine-specific demethy 74.4 46 0.0016 30.3 12.3 77 87-165 168-252 (489)
140 3fz3_A Prunin; TREE NUT allerg 74.0 16 0.00054 33.6 9.2 38 81-119 46-83 (531)
141 3es4_A Uncharacterized protein 73.7 13 0.00045 27.1 7.1 66 70-154 28-94 (116)
142 3myx_A Uncharacterized protein 73.6 13 0.00043 30.6 7.8 81 63-162 147-228 (238)
143 3al5_A HTYW5, JMJC domain-cont 72.7 34 0.0012 29.1 10.6 87 86-177 170-273 (338)
144 3rcq_A Aspartyl/asparaginyl be 65.2 11 0.00036 30.2 5.4 83 84-181 103-187 (197)
145 3pur_A Lysine-specific demethy 60.6 17 0.00059 33.4 6.5 96 81-179 294-403 (528)
146 3gbg_A TCP pilus virulence reg 60.3 24 0.00083 28.2 7.0 50 97-164 23-72 (276)
147 1e91_A Paired amphipathic heli 56.0 34 0.0012 23.3 6.0 63 7-71 13-84 (85)
148 2rg4_A Uncharacterized protein 54.6 54 0.0018 26.0 8.0 23 83-105 103-125 (216)
149 2czy_A Paired amphipathic heli 52.3 49 0.0017 22.0 6.6 62 7-72 10-72 (77)
150 2cr7_A Paired amphipathic heli 49.6 48 0.0017 22.3 5.9 62 6-71 15-77 (80)
151 2qnk_A 3-hydroxyanthranilate 3 42.9 51 0.0017 27.8 6.1 94 74-189 25-122 (286)
152 2q5x_A Nuclear pore complex pr 29.0 17 0.00057 27.9 0.9 24 182-206 130-153 (155)
153 1e5r_A Proline oxidase; oxidor 27.9 32 0.0011 29.1 2.5 37 140-177 140-177 (290)
154 2ypd_A Probable JMJC domain-co 26.6 66 0.0023 28.3 4.4 38 141-180 294-331 (392)
155 1k19_A Chemosensory protein CS 26.2 1E+02 0.0034 22.3 4.6 65 8-72 23-95 (112)
156 2f05_A Paired amphipathic heli 25.9 1.1E+02 0.0036 21.8 4.7 68 7-76 13-89 (105)
157 3b09_A Peptidyl-prolyl CIS-tra 25.7 1.3E+02 0.0044 20.5 5.0 34 22-55 52-86 (88)
158 3m70_A Tellurite resistance pr 24.2 1.9E+02 0.0066 22.7 6.7 72 95-180 23-96 (286)
159 3fpn_B Geobacillus stearotherm 24.2 1.2E+02 0.0041 21.2 4.7 27 168-194 65-91 (106)
160 2opw_A Phyhd1 protein; double- 23.0 1.2E+02 0.0042 24.3 5.3 38 141-179 229-268 (291)
161 2di0_A Activating signal coint 21.8 1.4E+02 0.0047 19.8 4.3 38 20-60 9-46 (71)
162 2pjp_A Selenocysteine-specific 20.7 40 0.0014 24.0 1.6 53 20-75 60-113 (121)
No 1
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=100.00 E-value=2.9e-54 Score=356.53 Aligned_cols=186 Identities=48% Similarity=0.893 Sum_probs=173.8
Q ss_pred ccCCchhHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCccchhhhhccCCccceEEeeecCCCceEEEEEEccCCCc
Q psy5204 16 LRLTRIDTLSELIHRVYAAFEGRSSVDVAHVKFLMESYVSNADDWKRYAQFDENRYTRNLVDEGDGKFNLILLCWSQGQA 95 (209)
Q Consensus 16 ~~~~~~~~l~~li~~l~~~~~~~~~~~~~~v~~ll~~l~~~~~~w~~~~~~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~ 95 (209)
+..+.+++|++||++|+++|+++ ..++++|+.+|++|++++++|.+|+.|||.+|+|++|++++++|+|++++|+|||.
T Consensus 4 ~~~~~~~~l~~li~~l~~~~~~~-~~~~~~l~~ll~~l~~~~~~W~~~~~~d~~~y~R~ll~~~~~~~~l~ll~W~PGq~ 82 (200)
T 3eln_A 4 TELLKPRTLADLIRILHELFAGD-EVNVEEVQAVLEAYESNPAEWALYAKFDQYRYTRNLVDQGNGKFNLMILCWGEGHG 82 (200)
T ss_dssp CCCCCCSSHHHHHHHHHHHTSSS-SCCHHHHHHHHHHSCCCHHHHGGGCCCCSSSCEEEEEECGGGTCEEEEEEECTTCB
T ss_pred cccCChHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHcCHHHHHhhhccCccceEEEeeecCCCceEEEEEEECCCCc
Confidence 35788999999999999999986 69999999999999999999999999999999999999767899999999999999
Q ss_pred cCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEE
Q psy5204 96 SSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 96 spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
||||||+++||+++||+|+++|++|++++++.. ++...++.++.+|++.+++++.+||+|+|++.+++||||||
T Consensus 83 SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~------~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHv 156 (200)
T 3eln_A 83 SSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSN------EMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHL 156 (200)
T ss_dssp CCEECCTTCEEEEEEEESCEEEEEECCCCSSCC------CCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEE
T ss_pred CCCccCCCceEEEEEEeeeEEEEEeecCCCCcc------cccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEe
Confidence 999999999999999999999999999766532 37888899999999999977788999999986689999999
Q ss_pred eCCCCCcceEEECCCCceEEeeeeEEeccCeec
Q psy5204 176 YSPPFNICSSFDAQTGVKSRARLTYWSKFGHKV 208 (209)
Q Consensus 176 Y~pp~~~~~~yd~~~g~~~~~~~~~~s~~g~~~ 208 (209)
||||+.+|++||+.||++++++++|+|+||+|+
T Consensus 157 Y~pp~~~~~~yd~~tG~~~~~~~~~~s~~g~~~ 189 (200)
T 3eln_A 157 YSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIRT 189 (200)
T ss_dssp EESCCSEEEEECTTTCCEEEEECCCSEETTEEC
T ss_pred CCCCccceEEEECCCCCEEEEeeEEEcCCCEEC
Confidence 999999999999999999999999999999985
No 2
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=100.00 E-value=1.2e-44 Score=300.81 Aligned_cols=176 Identities=23% Similarity=0.423 Sum_probs=153.7
Q ss_pred CchhHHHHHHHHHHHHhcCCC--CCCHHHHHHHHHHhhcCccchhh--hhccCCccceEEeeec-CCCceEEEEEEccCC
Q psy5204 19 TRIDTLSELIHRVYAAFEGRS--SVDVAHVKFLMESYVSNADDWKR--YAQFDENRYTRNLVDE-GDGKFNLILLCWSQG 93 (209)
Q Consensus 19 ~~~~~l~~li~~l~~~~~~~~--~~~~~~v~~ll~~l~~~~~~w~~--~~~~~~~~Y~R~ll~~-~~~~~~l~~~~W~pG 93 (209)
..+++|++||++|++++++.. ...+++|+.+|++|.++ ++|.+ ++.+++.+|+|++||+ ++++|+|++++|.||
T Consensus 5 ~~~~~l~~fi~~l~~~l~~~~~~~~~l~~l~~ll~~l~~~-~~wl~~~~~~p~~~~y~r~lL~~dp~~~f~v~~l~W~PG 83 (211)
T 3uss_A 5 LRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQ-DDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPG 83 (211)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSS-CCCCCGGGGCCCSSSCEEEEEEECTTSSCEEEEEEECTT
T ss_pred ccHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHcC-ccccchhhcCCCCCceeEEEEecCCCCCEEEEEEEECCC
Confidence 358999999999999998752 35689999999999998 57986 5557778899999995 678999999999999
Q ss_pred CccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCC-CeEEEecCCCCCceEE
Q psy5204 94 QASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSM-GLHKVGNSGPHPAAVS 172 (209)
Q Consensus 94 ~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~-~iH~v~n~~~~~~avS 172 (209)
|.||||||+ +||+++||+|+++|++|++++++.. .....+..+.+|++++|.|.. +||+|+|++.++++||
T Consensus 84 q~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~-------~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avS 155 (211)
T 3uss_A 84 QITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRP-------HPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSIS 155 (211)
T ss_dssp CBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCE-------EECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEE
T ss_pred CcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCc-------ccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEE
Confidence 999999999 8999999999999999999876531 233346899999999999864 4999999976789999
Q ss_pred EEEeCCCCC--cceEEECCCCceEEeeeeEEeccCeec
Q psy5204 173 LHLYSPPFN--ICSSFDAQTGVKSRARLTYWSKFGHKV 208 (209)
Q Consensus 173 LHvY~pp~~--~~~~yd~~~g~~~~~~~~~~s~~g~~~ 208 (209)
|||||||+. .|.+||+ +|+.+ .|.|+|+|..
T Consensus 156 LHvYg~pl~~~~r~~fd~-tG~~~----~f~s~y~~~~ 188 (211)
T 3uss_A 156 IHVYGANIGAVRRAVFSA-EGEEK----PFISGYSNSR 188 (211)
T ss_dssp EEEESSCGGGCCEEEECT-TSCEE----EECCCCSCSE
T ss_pred EEEcCCCCCcceeEEECC-CCCEE----EeeecccCCC
Confidence 999999998 6899999 99999 8999998864
No 3
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=100.00 E-value=1.6e-43 Score=293.96 Aligned_cols=177 Identities=21% Similarity=0.388 Sum_probs=155.7
Q ss_pred CCchhHHHHHHHHHHHHhcCCC--CCCHHHHHHHHHHhhcCccchh--hhhccCCccceEEeeec-CCCceEEEEEEccC
Q psy5204 18 LTRIDTLSELIHRVYAAFEGRS--SVDVAHVKFLMESYVSNADDWK--RYAQFDENRYTRNLVDE-GDGKFNLILLCWSQ 92 (209)
Q Consensus 18 ~~~~~~l~~li~~l~~~~~~~~--~~~~~~v~~ll~~l~~~~~~w~--~~~~~~~~~Y~R~ll~~-~~~~~~l~~~~W~p 92 (209)
.+.+++|++||++|++++++.. ...+++|+.+|++|.++ ++|. .|+.+++..|+|++|++ ++++|+|++++|.|
T Consensus 10 ~~~~~~l~~fi~~l~~~~~~~~~~~~~l~~l~~ll~~l~~~-~~wl~~~~~~~~~~~y~r~lL~~dp~~~~~v~~l~w~P 88 (208)
T 2gm6_A 10 RASLAPLREFITGLSALLDEQPGEARILREGGALLARLVAR-DDWLPDAFAQPHPEYYQQMLLHCDSAERFSIVSFVWGP 88 (208)
T ss_dssp --CCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHS-CCSCCGGGSCCCSSSCEEEEEEECTTSSCEEEEEEECT
T ss_pred cCCcHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhcC-chhhhhhhcCCCccceeEEEeecCCCCCEEEEEEEeCC
Confidence 4557899999999999999752 23458999999999997 7898 56778888999999997 66899999999999
Q ss_pred CCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC-eEEEecCCCCCceE
Q psy5204 93 GQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG-LHKVGNSGPHPAAV 171 (209)
Q Consensus 93 G~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~-iH~v~n~~~~~~av 171 (209)
||.||||||++ ||+++||+|+++|++|++++++. .+....+.++.+|++.++.+..+ ||+|+|++.++++|
T Consensus 89 Gq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~-------~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~av 160 (208)
T 2gm6_A 89 GQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGR-------PVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSI 160 (208)
T ss_dssp TCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSC-------EEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEE
T ss_pred CcccCcccCCc-ceEEEEecccEEEEEeecCCCCc-------cccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEE
Confidence 99999999996 99999999999999999987653 26666789999999999987645 99999996578999
Q ss_pred EEEEeCCCCCc--ceEEECCCCceEEeeeeEEeccCeec
Q psy5204 172 SLHLYSPPFNI--CSSFDAQTGVKSRARLTYWSKFGHKV 208 (209)
Q Consensus 172 SLHvY~pp~~~--~~~yd~~~g~~~~~~~~~~s~~g~~~ 208 (209)
|||||+||+.. |.+||+ +|+.+ .|+|+||++.
T Consensus 161 sLHvY~~~~~~~~r~~fd~-tg~~~----~f~s~y~~~~ 194 (208)
T 2gm6_A 161 SIHVYGANIGGVRRSVYTE-AGERK----PFISGYSNPY 194 (208)
T ss_dssp EEEEESSCGGGCCEEEECT-TSCEE----EECCCCSCSC
T ss_pred EEEEEcCCCCcceEEEECC-CCCEE----EEEeccCCCC
Confidence 99999999987 899999 99999 9999999985
No 4
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=100.00 E-value=8.6e-43 Score=281.41 Aligned_cols=157 Identities=22% Similarity=0.328 Sum_probs=137.5
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCccchhhhhc-cCCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCc
Q psy5204 26 ELIHRVYAAFEGRSSVDVAHVKFLMESYVSNADDWKRYAQ-FDENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQA 104 (209)
Q Consensus 26 ~li~~l~~~~~~~~~~~~~~v~~ll~~l~~~~~~w~~~~~-~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s 104 (209)
+|.+.|+++|++...+++++|+.+|+++..++++|.+|+. +++.+|+|++|++ +++|+|++++|.|||.||||||+++
T Consensus 12 ~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~~w~~~~~~~~~~~YtR~ll~~-~~~~~v~~l~W~PGq~S~iHdH~~s 90 (171)
T 3eqe_A 12 ELYECIQDIFGGLKNPSVKDLATSLKQIPNAAKLSQPYIKEPDQYAYGRNAIYR-NNELEIIVINIPPNKETTVHDHGQS 90 (171)
T ss_dssp CHHHHHHHHHTTCSSCCHHHHHHHHTTSTTHHHHHTTSCCCCSSSSSEEEEEEE-CSSCEEEEEEECTTCBCCEECCTTC
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCHHHHhhcccCCCCCcEEEEEEec-CCCeEEEEEEECCCCCcccccCCCc
Confidence 5788999999995589999999999999999999999994 7778899999998 7999999999999999999999999
Q ss_pred eEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCCCcce
Q psy5204 105 HCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFNICS 184 (209)
Q Consensus 105 ~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~~~~ 184 (209)
||+++||+|+++|++|+++++. ++..++..+.+|++.+ .++.+||+|+|++ +++||||||||||+.+|+
T Consensus 91 ~~~~~VL~G~l~e~~y~~~~~~---------~~~~~~~~l~~G~~~~-~~~~~iH~V~N~~-~~~aVSlHvY~pp~~~~~ 159 (171)
T 3eqe_A 91 IGCAMVLEGKLLNSIYRSTGEH---------AELSNSYFVHEGECLI-STKGLIHKMSNPT-SERMVSLHVYSPPLEDMT 159 (171)
T ss_dssp EEEEEEEESEEEEEEEEECSSS---------EEEEEEEEEETTCEEE-ECTTCEEEEECCS-SSCEEEEEEEESCCCCCC
T ss_pred eEEEEEEeeeEEEEEeecCCCc---------eeecceEEeCCCcEEE-eCCCCEEEEECCC-CCCEEEEEEeCCCcccce
Confidence 9999999999999999975321 4456788999999854 4557899999998 599999999999999999
Q ss_pred EEECCCCceE
Q psy5204 185 SFDAQTGVKS 194 (209)
Q Consensus 185 ~yd~~~g~~~ 194 (209)
+||+++|++.
T Consensus 160 ~y~~~~g~~~ 169 (171)
T 3eqe_A 160 VFEEQKEVLE 169 (171)
T ss_dssp EECCC-----
T ss_pred EEeCCCCeee
Confidence 9999999875
No 5
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.92 E-value=2.1e-08 Score=74.68 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=79.9
Q ss_pred hhhhccCCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccc
Q psy5204 61 KRYAQFDENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEIS 140 (209)
Q Consensus 61 ~~~~~~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~ 140 (209)
..+..++++...|..+.. ++.+.+..+...||+..+.|-|.+..-++.|++|+++... +++ .
T Consensus 18 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~----~~~-------------~ 79 (125)
T 3h8u_A 18 DEYVRPSNGEPIRSVVLE-TNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ----GNG-------------I 79 (125)
T ss_dssp HHHCCCCSSSCCCEEEEE-CSSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC----STT-------------C
T ss_pred hHhhccCCCCcEEEEEEc-CCCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE----CCC-------------e
Confidence 344555555555666665 5789999999999999999999976778899999998642 111 3
Q ss_pred eEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCCCcc
Q psy5204 141 RTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFNIC 183 (209)
Q Consensus 141 ~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~~~ 183 (209)
...+++||+.++++ +..|++.|.+ +++++-|-++.|+..+.
T Consensus 80 ~~~l~~Gd~~~i~~-~~~H~~~n~~-~~~~~~l~v~~p~~~~~ 120 (125)
T 3h8u_A 80 VTHLKAGDIAIAKP-GQVHGAMNSG-PEPFIFVSVVAPGNAGF 120 (125)
T ss_dssp EEEEETTEEEEECT-TCCCEEEECS-SSCEEEEEEEESTTCCC
T ss_pred EEEeCCCCEEEECC-CCEEEeEeCC-CCCEEEEEEECCCcccc
Confidence 67899999988876 5799999997 68999999999886543
No 6
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.76 E-value=1.6e-07 Score=66.56 Aligned_cols=94 Identities=18% Similarity=0.198 Sum_probs=75.1
Q ss_pred ccCCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEe
Q psy5204 65 QFDENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTEL 144 (209)
Q Consensus 65 ~~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~ 144 (209)
.+.+....+..+.. ++.+++..+.+.||...+.|-|.+..-++.|++|+++... ++ ....+
T Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~-----~~-------------~~~~l 71 (105)
T 1v70_A 11 RYNPEKMAKIPVFQ-SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV-----GE-------------EEALL 71 (105)
T ss_dssp CCCSSSCEEEEEEE-ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE-----TT-------------EEEEE
T ss_pred ecCccccccceecC-CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE-----CC-------------EEEEe
Confidence 34455565555554 5789999999999999999999965668899999998764 11 36789
Q ss_pred eCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 145 AENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 145 ~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
.+||+.++++ +..|++.|.+ ++++.-|-++.||
T Consensus 72 ~~Gd~~~ip~-~~~H~~~~~~-~~~~~~~~v~~p~ 104 (105)
T 1v70_A 72 APGMAAFAPA-GAPHGVRNES-ASPALLLVVTAPR 104 (105)
T ss_dssp CTTCEEEECT-TSCEEEECCS-SSCEEEEEEEESC
T ss_pred CCCCEEEECC-CCcEEeEeCC-CCCEEEEEEeCCC
Confidence 9999999876 5699999997 5789989888876
No 7
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.61 E-value=3.1e-06 Score=67.55 Aligned_cols=127 Identities=10% Similarity=0.051 Sum_probs=92.2
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHhhcCccchhhhhcc--------C-CccceEEeeec--CCCceEEEEEEccCCCccC--
Q psy5204 31 VYAAFEGRSSVDVAHVKFLMESYVSNADDWKRYAQF--------D-ENRYTRNLVDE--GDGKFNLILLCWSQGQASS-- 97 (209)
Q Consensus 31 l~~~~~~~~~~~~~~v~~ll~~l~~~~~~w~~~~~~--------~-~~~Y~R~ll~~--~~~~~~l~~~~W~pG~~sp-- 97 (209)
|.++..+...++++.+..+.+.|..+++++...... . ...|.+.+|.. .+..++++.+..+||..++
T Consensus 41 is~~e~g~~~p~~~~l~~ia~~l~v~~~~l~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~ 120 (192)
T 1y9q_A 41 LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHHQQMSS 120 (192)
T ss_dssp HHHHHTTCSCCCHHHHHHHHHHHTCCSGGGGTTSTHHHHHCCBCTTCTTEEEEEEEEEETTTTEEEEEEEECTTCEEEEC
T ss_pred HHHHHcCCCCCCHHHHHHHHHHHCcCHHHHcCCCCCCCccceEEeCCCCEEEEEeccCCCCCcEEEEEEEECCCCCccCC
Confidence 444434444688899999999998887766522111 1 23466666653 4689999999999999887
Q ss_pred CCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeC
Q psy5204 98 IHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYS 177 (209)
Q Consensus 98 iHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~ 177 (209)
.|-|+. .-++.|++|+++... ++ ....+.+||+.++++ +..|++.|.+ ++++ -|-|..
T Consensus 121 ~H~h~~-~E~~~Vl~G~~~~~~-----~~-------------~~~~l~~GD~i~i~~-~~~H~~~n~~-~~~~-~l~v~~ 178 (192)
T 1y9q_A 121 PHALGV-IEYIHVLEGIMKVFF-----DE-------------QWHELQQGEHIRFFS-DQPHGYAAVT-EKAV-FQNIVA 178 (192)
T ss_dssp CCSTTC-EEEEEEEESCEEEEE-----TT-------------EEEEECTTCEEEEEC-SSSEEEEESS-SCEE-EEEEEE
T ss_pred CCCCCC-EEEEEEEEeEEEEEE-----CC-------------EEEEeCCCCEEEEcC-CCCeEeECCC-CCcE-EEEEEe
Confidence 777774 678999999998664 11 357899999999986 5689999997 5777 666665
Q ss_pred CC
Q psy5204 178 PP 179 (209)
Q Consensus 178 pp 179 (209)
||
T Consensus 179 ~~ 180 (192)
T 1y9q_A 179 YP 180 (192)
T ss_dssp CC
T ss_pred cC
Confidence 55
No 8
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.58 E-value=7.9e-07 Score=69.93 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=89.0
Q ss_pred cceEEeeec--CCCceEEEEEEccCCCcc-CCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeC
Q psy5204 70 RYTRNLVDE--GDGKFNLILLCWSQGQAS-SIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAE 146 (209)
Q Consensus 70 ~Y~R~ll~~--~~~~~~l~~~~W~pG~~s-piHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~ 146 (209)
.+.|.+|.. +...+++.++...||..+ +.|-|.+..-++.|++|+++... ++ ....+.+
T Consensus 28 G~~~~~l~~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~-----~~-------------~~~~l~~ 89 (163)
T 3i7d_A 28 GRSSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD-----DQ-------------GEHPMVP 89 (163)
T ss_dssp TEEEEEHHHHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE-----TT-------------EEEEECT
T ss_pred CeEEEEcccCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE-----CC-------------EEEEeCC
Confidence 477888863 467899999999999976 89999975578999999998775 11 3678999
Q ss_pred CcEEEEcCCC--CeEEEecCCCCCceEEEEEeCCCCCcceEEECCCCceEEe---eeeEEeccCe
Q psy5204 147 NDVCYINDSM--GLHKVGNSGPHPAAVSLHLYSPPFNICSSFDAQTGVKSRA---RLTYWSKFGH 206 (209)
Q Consensus 147 G~v~~~~~~~--~iH~v~n~~~~~~avSLHvY~pp~~~~~~yd~~~g~~~~~---~~~~~s~~g~ 206 (209)
|+++++.+ + ..|++.|.+ ++++..|-|+.|+......| ++.+..-.. +..|.=+-|.
T Consensus 90 GD~i~ip~-~~~~~H~~~n~~-~~~~~~l~v~~p~~~d~~~y-pd~~~~~~~~~~~~~~~~~~~~ 151 (163)
T 3i7d_A 90 GDCAAFPA-GDPNGHQFVNRT-DAPATFLVVGTRTPTETAYY-SDMDMMVKQDASGFAFTRKDGS 151 (163)
T ss_dssp TCEEEECT-TCCCCBEEECCS-SSCEEEEEEEECCSCEEEEE-TTTTEEEEECSSCEEEECTTSS
T ss_pred CCEEEECC-CCCcceEEEECC-CCCEEEEEEECCCCCCcccC-CCCCceeeecCCceeeEecCCc
Confidence 99999886 5 699999998 68999999999998766666 343444322 2456655554
No 9
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.55 E-value=1e-06 Score=62.99 Aligned_cols=76 Identities=14% Similarity=0.102 Sum_probs=61.4
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
+..++++.+..+||..++.|-|.+..-++.|++|+++.+. +++ . ....+.+||++++++ +..|
T Consensus 15 ~~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~----~~g---------~---~~~~l~~Gd~~~~p~-~~~H 77 (97)
T 2fqp_A 15 NERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET----PEG---------S---VTSQLTRGVSYTRPE-GVEH 77 (97)
T ss_dssp SSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE----TTE---------E---EEEEECTTCCEEECT-TCEE
T ss_pred CCeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe----CCC---------C---EEEEEcCCCEEEeCC-CCcc
Confidence 6899999999999999999999975458899999998764 111 0 257899999999876 5699
Q ss_pred EEecCCCCCceEEE
Q psy5204 160 KVGNSGPHPAAVSL 173 (209)
Q Consensus 160 ~v~n~~~~~~avSL 173 (209)
++.|.+ ++++..|
T Consensus 78 ~~~N~g-~~~~~~l 90 (97)
T 2fqp_A 78 NVINPS-DTEFVFV 90 (97)
T ss_dssp EEECCS-SSCEEEE
T ss_pred cCEeCC-CCcEEEE
Confidence 999998 5676554
No 10
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.44 E-value=4.2e-06 Score=64.30 Aligned_cols=95 Identities=17% Similarity=0.227 Sum_probs=72.7
Q ss_pred EEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEE
Q psy5204 73 RNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYI 152 (209)
Q Consensus 73 R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~ 152 (209)
|..+.. ...+++..+...||...+.|-|.+..-++.|++|+++...-... . .+ ..+..+.+|+++++
T Consensus 34 ~~~~~~-~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~---~-------~~--~~~~~l~~Gd~i~i 100 (148)
T 2oa2_A 34 RRALWT-GDHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQ---D-------NL--HFQEEVFDDYAILI 100 (148)
T ss_dssp EEEEEE-CSSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBT---T-------BC--CEEEEEETTCEEEE
T ss_pred eeEEEc-CCceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCcc---c-------cc--eeeEEECCCCEEEE
Confidence 344443 57899999999999999999998666889999999988763110 0 00 01378999999998
Q ss_pred cCCCCeEEEecCCCCCceEEEEEeCCCCCc
Q psy5204 153 NDSMGLHKVGNSGPHPAAVSLHLYSPPFNI 182 (209)
Q Consensus 153 ~~~~~iH~v~n~~~~~~avSLHvY~pp~~~ 182 (209)
++ +..|++.|.+ ++++.-+-+|.|+...
T Consensus 101 p~-g~~H~~~n~~-~~~~~~l~i~~~~~~~ 128 (148)
T 2oa2_A 101 PA-GTWHNVRNTG-NRPLKLYSIYAPPQHP 128 (148)
T ss_dssp CT-TCEEEEEECS-SSCEEEEEEEESCCSC
T ss_pred CC-CCcEEEEECC-CCCEEEEEEECCCCCC
Confidence 76 5699999997 5788888889888543
No 11
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.41 E-value=4.4e-06 Score=59.95 Aligned_cols=94 Identities=21% Similarity=0.285 Sum_probs=70.9
Q ss_pred hccCCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCc-eEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceE
Q psy5204 64 AQFDENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQA-HCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRT 142 (209)
Q Consensus 64 ~~~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s-~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~ 142 (209)
..+.+..+.+.+|.. ++.+++..+...||...+.|.|... ..++.|++|+++... ++ ....
T Consensus 15 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~----~~-------------~~~~ 76 (110)
T 2q30_A 15 VRFDDQRFVMELVHE-SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG----DG-------------DAVI 76 (110)
T ss_dssp CCCCSSSCEEEEEEE-CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC----GG-------------GCEE
T ss_pred eeecCCCEEEEEEec-CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe----CC-------------CEEE
Confidence 344445677877775 6799999999999999999999852 334799999998653 10 1367
Q ss_pred EeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 143 ELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 143 ~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
.+.+||+.++++ +..|++.|.+ + +.-|-++.|+
T Consensus 77 ~l~~Gd~~~ip~-~~~H~~~~~~-~--~~~l~~~~p~ 109 (110)
T 2q30_A 77 PAPRGAVLVAPI-STPHGVRAVT-D--MKVLVTIAPP 109 (110)
T ss_dssp EECTTEEEEEET-TSCEEEEESS-S--EEEEEEEESC
T ss_pred EECCCCEEEeCC-CCcEEEEEcC-C--cEEEEEECCC
Confidence 799999999886 5699999986 2 4556777765
No 12
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.40 E-value=6e-07 Score=65.01 Aligned_cols=85 Identities=19% Similarity=0.190 Sum_probs=63.4
Q ss_pred eEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEE
Q psy5204 72 TRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCY 151 (209)
Q Consensus 72 ~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~ 151 (209)
..-+|. |++|.|.-+..+||+.++.|-|..-.-++.|++|+++.+. +++.. ....+.+|++++
T Consensus 8 ~~V~ie--n~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~----~d~~~-----------~~~~l~~G~~~~ 70 (98)
T 3lag_A 8 SEIQID--NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA----PDGTR-----------SLAQLKTGRSYA 70 (98)
T ss_dssp EEEEEE--SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC----TTSCE-----------ECCCBCTTCCEE
T ss_pred eeEEEc--CCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe----CCCce-----------EEEEecCCcEEE
Confidence 344554 7899999999999999999999975566778899988652 22210 234578999988
Q ss_pred EcCCCCeEEEecCCCCCceEEEEE
Q psy5204 152 INDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 152 ~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
++. ...|++.|++ +++.+-|=|
T Consensus 71 ip~-G~~H~~~N~g-~~pl~~IeV 92 (98)
T 3lag_A 71 RKA-GVQHDVRNES-TAEIVFLEI 92 (98)
T ss_dssp ECT-TCEEEEBCCS-SSCEEEEEE
T ss_pred EcC-CCcEECEECC-CCeEEEEEE
Confidence 865 5699999998 688776644
No 13
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.40 E-value=2.5e-06 Score=61.32 Aligned_cols=81 Identities=15% Similarity=0.245 Sum_probs=68.1
Q ss_pred CCceEEEEEEccCCCccCCC--CCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC
Q psy5204 80 DGKFNLILLCWSQGQASSIH--DHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG 157 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiH--DH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~ 157 (209)
++.+++..+...||..++.| -|.+..-++.|++|+++... ++ ....+++|++.++++ +.
T Consensus 18 ~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~-----~~-------------~~~~l~~Gd~~~i~~-~~ 78 (113)
T 2gu9_A 18 LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV-----DG-------------HTQALQAGSLIAIER-GQ 78 (113)
T ss_dssp ETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE-----TT-------------EEEEECTTEEEEECT-TC
T ss_pred CCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE-----CC-------------EEEEeCCCCEEEECC-CC
Confidence 57899999999999999999 99856788999999998765 11 357899999999886 56
Q ss_pred eEEEecCCCCCceEEEEEeCCCC
Q psy5204 158 LHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 158 iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
.|++.|.+ ++++..+-++.|+.
T Consensus 79 ~H~~~~~~-~~~~~~~~v~~~~~ 100 (113)
T 2gu9_A 79 AHEIRNTG-DTPLKTVNFYHPPA 100 (113)
T ss_dssp CEEEECCS-SSCEEEEEEEESCC
T ss_pred cEEeEcCC-CCCEEEEEEECCCC
Confidence 99999997 57888888888874
No 14
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.38 E-value=5.3e-06 Score=61.37 Aligned_cols=88 Identities=16% Similarity=0.182 Sum_probs=72.8
Q ss_pred cceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE
Q psy5204 70 RYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 70 ~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v 149 (209)
...+..+. ++.+++..+.+.||...+.|-|.. .-++.|++|+++... ++ ....+.+|++
T Consensus 30 G~~~~~~~--~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~-----~~-------------~~~~l~~Gd~ 88 (126)
T 4e2g_A 30 GFAMQAIQ--GKNLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTI-----GE-------------ETRVLRPGMA 88 (126)
T ss_dssp TEEEEEEE--CSSCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEE-----TT-------------EEEEECTTEE
T ss_pred CeEEEEEe--CCCeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEE-----CC-------------EEEEeCCCCE
Confidence 46666665 468999999999999999999996 778999999998765 11 3578999999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
+++++ +..|++.|.+ + ++.-|-++.|+..
T Consensus 89 ~~ip~-~~~H~~~~~~-~-~~~~l~v~~p~~~ 117 (126)
T 4e2g_A 89 YTIPG-GVRHRARTFE-D-GCLVLDIFSPPRE 117 (126)
T ss_dssp EEECT-TCCEEEECCT-T-CEEEEEEEESCCH
T ss_pred EEECC-CCcEEeEECC-C-CEEEEEEECCCCc
Confidence 98876 5699999996 4 8999999998754
No 15
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.35 E-value=5.8e-06 Score=64.24 Aligned_cols=102 Identities=15% Similarity=0.146 Sum_probs=78.0
Q ss_pred eEEeeec--CCCceEEEEEEccCCC-ccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCc
Q psy5204 72 TRNLVDE--GDGKFNLILLCWSQGQ-ASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEND 148 (209)
Q Consensus 72 ~R~ll~~--~~~~~~l~~~~W~pG~-~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~ 148 (209)
.+..|.. +...|++..+...||. ..+.|-|....-++.|++|+++... ++ ....+++||
T Consensus 33 ~~~~l~~~~g~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~-----~~-------------~~~~l~~Gd 94 (162)
T 3l2h_A 33 VNKSLGDAVGLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM-----EN-------------DQYPIAPGD 94 (162)
T ss_dssp EEEEHHHHHTCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE-----TT-------------EEEEECTTC
T ss_pred eEEEccCCCCCCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE-----CC-------------EEEEeCCCC
Confidence 3444543 5679999999999999 5999999556788999999998764 11 367899999
Q ss_pred EEEEcCCCCeEEEecCCCCCceEEEEEeCCCCCcceEEECCCCce
Q psy5204 149 VCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFNICSSFDAQTGVK 193 (209)
Q Consensus 149 v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~~~~~yd~~~g~~ 193 (209)
++++++....|++.|.+ +++++.|-|..|+......| ++.++.
T Consensus 95 ~i~i~~~~~~H~~~n~~-~~~~~~l~v~~p~~~~~~~~-pd~~~~ 137 (162)
T 3l2h_A 95 FVGFPCHAAAHSISNDG-TETLVCLVIGQRLDQDVVDY-PNQHKR 137 (162)
T ss_dssp EEEECTTSCCEEEECCS-SSCEEEEEEEECCSEEEEEE-TTTTEE
T ss_pred EEEECCCCceEEeEeCC-CCCEEEEEEECCCCCCeEec-CCCCcE
Confidence 99988622699999998 68999999999886544444 444443
No 16
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.29 E-value=1.2e-05 Score=58.32 Aligned_cols=80 Identities=10% Similarity=0.143 Sum_probs=62.9
Q ss_pred ccCCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEe
Q psy5204 65 QFDENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTEL 144 (209)
Q Consensus 65 ~~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~ 144 (209)
.+.+....+..|.. ++.+++..+...||+..|.|-|.. .-++.|++|+++... ++ ....+
T Consensus 23 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~g~~~~~H~H~~-~e~~~vl~G~~~~~~-----~~-------------~~~~l 82 (115)
T 1yhf_A 23 MIEQDQMLSRTLVQ-RQDLGITVFSLDKGQEIGRHSSPG-DAMVTILSGLAEITI-----DQ-------------ETYRV 82 (115)
T ss_dssp CCCTTCEEEEEEEE-ETTEEEEEEEECTTCEEEEECCSS-EEEEEEEESEEEEEE-----TT-------------EEEEE
T ss_pred eecCCCeEEEEEEe-CCceEEEEEEECCCCccCCEECCC-cEEEEEEeCEEEEEE-----CC-------------EEEEE
Confidence 33344555555554 578999999999999999999994 788999999998764 11 25789
Q ss_pred eCCcEEEEcCCCCeEEEecCC
Q psy5204 145 AENDVCYINDSMGLHKVGNSG 165 (209)
Q Consensus 145 ~~G~v~~~~~~~~iH~v~n~~ 165 (209)
.+|++.++++ +..|++.|.+
T Consensus 83 ~~Gd~~~ip~-~~~H~~~~~~ 102 (115)
T 1yhf_A 83 AEGQTIVMPA-GIPHALYAVE 102 (115)
T ss_dssp ETTCEEEECT-TSCEEEEESS
T ss_pred CCCCEEEECC-CCCEEEEECC
Confidence 9999999876 5699999986
No 17
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.29 E-value=6.4e-05 Score=59.88 Aligned_cols=130 Identities=12% Similarity=0.125 Sum_probs=89.8
Q ss_pred HHHHHhcCCC-CCCHHHHHHHHHHhhcCccchhhhh---------------c-c-----C-CccceEEeeec--CCCceE
Q psy5204 30 RVYAAFEGRS-SVDVAHVKFLMESYVSNADDWKRYA---------------Q-F-----D-ENRYTRNLVDE--GDGKFN 84 (209)
Q Consensus 30 ~l~~~~~~~~-~~~~~~v~~ll~~l~~~~~~w~~~~---------------~-~-----~-~~~Y~R~ll~~--~~~~~~ 84 (209)
.|.++..+.. .++++.+..+.+.|..+.+++..-. . . . ...|...+|.. .+..++
T Consensus 39 ~ls~~e~g~~~~p~~~~l~~ia~~l~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (198)
T 2bnm_A 39 TVAAWENGEGGELTLTQLGRIAHVLGTSIGALTPPAGNDLDDGVIIQMPDERPILKGVRDNVDYYVYNCLVRTKRAPSLV 118 (198)
T ss_dssp HHHHHHTTTCTTCBHHHHHHHHHHTTSCTGGGSCCCCCCCBTTBCCCCGGGCCEECCSTTCSTTEEEEECCCCTTSTTCE
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHhCCCHHHEEccCCCCcccCceEEeecccccccccccCCCceEEEeeccCCCCCcce
Confidence 3444444444 5788888888888877655553110 0 0 1 12355666653 367899
Q ss_pred EEEEEccCCCccC---CCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 85 LILLCWSQGQASS---IHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 85 l~~~~W~pG~~sp---iHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
++.+..+||..++ .|.|.+ .-++.|++|+++... .+++. .....+++||..++++ ...|++
T Consensus 119 ~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~---~~~~~-----------~~~~~l~~GD~~~~~~-~~~H~~ 182 (198)
T 2bnm_A 119 PLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKW---GDKEN-----------PKEALLPTGASMFVEE-HVPHAF 182 (198)
T ss_dssp EEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEE---SCTTS-----------CEEEEECTTCEEEECT-TCCEEE
T ss_pred EEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEE---CCcCC-----------cccEEECCCCEEEeCC-CCceEE
Confidence 9999999999988 699997 577899999998765 21110 1367899999999976 568999
Q ss_pred ecC-CCCCceEEEEEe
Q psy5204 162 GNS-GPHPAAVSLHLY 176 (209)
Q Consensus 162 ~n~-~~~~~avSLHvY 176 (209)
.|. + ++++.-|-|.
T Consensus 183 ~n~~~-~~~~~~l~v~ 197 (198)
T 2bnm_A 183 TAAKG-TGSAKLIAVN 197 (198)
T ss_dssp EESTT-SCCEEEEEEE
T ss_pred EecCC-CCCeEEEEEe
Confidence 999 7 5777666543
No 18
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.28 E-value=1.3e-06 Score=63.29 Aligned_cols=82 Identities=18% Similarity=0.157 Sum_probs=60.6
Q ss_pred eeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcC
Q psy5204 75 LVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYIND 154 (209)
Q Consensus 75 ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~ 154 (209)
++.+ |+++.++.+...||..++.|.|....-++.+++|+++... +++. .....+++|++.++.+
T Consensus 10 v~~~-~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~----~dG~-----------~~~~~l~aGd~~~~p~ 73 (98)
T 2ozi_A 10 IQID-NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA----PDGT-----------RSLAQLKTGRSYARKA 73 (98)
T ss_dssp EEEE-SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC----TTSC-----------EECCCBCTTCCEEECT
T ss_pred EEEe-CCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe----CCCc-----------EEEEEECCCCEEEECC
Confidence 3455 7899999999999999999999976555567899988653 2221 0134688999888865
Q ss_pred CCCeEEEecCCCCCceEEEE
Q psy5204 155 SMGLHKVGNSGPHPAAVSLH 174 (209)
Q Consensus 155 ~~~iH~v~n~~~~~~avSLH 174 (209)
+..|++.|.+ +++.+-|=
T Consensus 74 -G~~H~~~N~g-~~~l~fi~ 91 (98)
T 2ozi_A 74 -GVQHDVRNES-TAEIVFLE 91 (98)
T ss_dssp -TCEEEEEECS-SSCEEEEE
T ss_pred -CCceeCEECC-CCCEEEEE
Confidence 4699999998 57776553
No 19
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.22 E-value=1.6e-05 Score=62.22 Aligned_cols=90 Identities=14% Similarity=0.154 Sum_probs=71.0
Q ss_pred ceEEeee-cCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE
Q psy5204 71 YTRNLVD-EGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 71 Y~R~ll~-~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v 149 (209)
.+|..|. ..+..|++..+...||..++.|-|.. .-++.|++|+++.+. ++ ....+.+||+
T Consensus 31 ~~~~~L~~~~~~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~v~v-----~g-------------~~~~l~~Gd~ 91 (156)
T 3kgz_A 31 VSRQLLFADPNLACEWRYFEVDEGGYSTLERHAH-VHAVMIHRGHGQCLV-----GE-------------TISDVAQGDL 91 (156)
T ss_dssp EEEEEEECCTTCSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEEEEEEEE-----TT-------------EEEEEETTCE
T ss_pred eEEEEEEcCCCCcEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE-----CC-------------EEEEeCCCCE
Confidence 4555554 44578999999999999999999996 467899999998774 11 3678999999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
+++++ +..|++.|.+ ++++..|=+..++..
T Consensus 92 i~ip~-~~~H~~~n~g-~~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 92 VFIPP-MTWHQFRANR-GDCLGFLCVVNAARD 121 (156)
T ss_dssp EEECT-TCCEEEECCS-SSCEEEEEEEESSCC
T ss_pred EEECC-CCcEEeEeCC-CCCEEEEEEEeCCCC
Confidence 99876 5799999998 578887777766543
No 20
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.21 E-value=1e-05 Score=63.01 Aligned_cols=98 Identities=21% Similarity=0.149 Sum_probs=73.6
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
...+++..+...||..++.|-|.. .-++.|++|+++...-.-. ... -.......+.+|++.++++ +..|
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~~~-~~~--------~~~~~~~~l~~Gd~i~ip~-~~~H 106 (163)
T 1lr5_A 38 MKEVEVWLQTISPGQRTPIHRHSC-EEVFTVLKGKGTLLMGSSS-LKY--------PGQPQEIPFFQNTTFSIPV-NDPH 106 (163)
T ss_dssp CSSEEEEEEEECTTCBCCEEEESS-CEEEEEEECCEEEEECCSS-SSS--------CCSCEEEEECTTEEEEECT-TCCE
T ss_pred CCcEEEEEEEECCCCcCCCeECCC-CeEEEEEeCEEEEEECCcc-ccc--------cCccEEEEeCCCCEEEECC-CCcE
Confidence 458999999999999999999986 4589999999987763110 000 0011467899999999876 5699
Q ss_pred EEecCCCCCceEEEEEeCCCCCcceEEEC
Q psy5204 160 KVGNSGPHPAAVSLHLYSPPFNICSSFDA 188 (209)
Q Consensus 160 ~v~n~~~~~~avSLHvY~pp~~~~~~yd~ 188 (209)
++.|.+.++++..|-++.++......||.
T Consensus 107 ~~~n~~~~~~~~~l~i~~~~~~~~~~~~~ 135 (163)
T 1lr5_A 107 QVWNSDEHEDLQVLVIISRPPAKIFLYDD 135 (163)
T ss_dssp EEECCCSSSCEEEEEEEESSSCCEEEESS
T ss_pred EeEeCCCCCCEEEEEEECCCCcccccccc
Confidence 99998624788888888887666666663
No 21
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.20 E-value=1.6e-05 Score=59.85 Aligned_cols=93 Identities=17% Similarity=0.117 Sum_probs=71.6
Q ss_pred ceEEeeec--CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCc
Q psy5204 71 YTRNLVDE--GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEND 148 (209)
Q Consensus 71 Y~R~ll~~--~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~ 148 (209)
..|.++.. ++..+++..+...||..+|.|-|... -++.|++|+++..... + .....+++|+
T Consensus 25 ~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~-e~~~vl~G~~~~~~~~---~-------------~~~~~l~~Gd 87 (145)
T 3ht1_A 25 THRKLIDTPDGADRFVLTEFEVSPNGSTPPHFHEWE-HEIYVLEGSMGLVLPD---Q-------------GRTEEVGPGE 87 (145)
T ss_dssp EEEEEECGGGTCCSEEEEEEEEEEEEECCCEECSSC-EEEEEEEECEEEEEGG---G-------------TEEEEECTTC
T ss_pred EEEEEEccCCCCCcEEEEEEEECCCCcCCCccCCCc-eEEEEEEeEEEEEEeE---C-------------CEEEEECCCC
Confidence 44555543 45699999999999999999999975 4567999999866310 1 1367899999
Q ss_pred EEEEcCCCCeEEEecCCCCCceEEEEEeCCCCCc
Q psy5204 149 VCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFNI 182 (209)
Q Consensus 149 v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~~ 182 (209)
+.++++ +..|++.|.+ ++++..|-++.+....
T Consensus 88 ~~~ip~-~~~H~~~~~~-~~~~~~l~i~~~~~~~ 119 (145)
T 3ht1_A 88 AIFIPR-GEPHGFVTGP-GQTCRFLVVAPCERPP 119 (145)
T ss_dssp EEEECT-TCCBEEECCT-TCCEEEEEEEESCCCC
T ss_pred EEEECC-CCeEEeEcCC-CCCEEEEEEECCCCCC
Confidence 999876 5799999998 5788988888776443
No 22
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.19 E-value=6e-06 Score=68.73 Aligned_cols=82 Identities=13% Similarity=0.137 Sum_probs=68.9
Q ss_pred CceEEEEEEccC-CCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 81 GKFNLILLCWSQ-GQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 81 ~~~~l~~~~W~p-G~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
..++++++.++| |..++.|.|.+ .-++.|++|+++.+. ++ ....+.+||++++++ ...|
T Consensus 143 ~~~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i-----~~-------------~~~~l~~Gd~i~ip~-~~~H 202 (243)
T 3h7j_A 143 DWVEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTV-----EG-------------CTVEMKFGTAYFCEP-REDH 202 (243)
T ss_dssp TTEEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEE-----TT-------------EEEEECTTCEEEECT-TCCE
T ss_pred ceeEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEE-----CC-------------EEEEECCCCEEEECC-CCcE
Confidence 458899999999 99999999996 567899999998764 11 367799999999876 5699
Q ss_pred EEecCCCCCceEEEEEeCCCCCcc
Q psy5204 160 KVGNSGPHPAAVSLHLYSPPFNIC 183 (209)
Q Consensus 160 ~v~n~~~~~~avSLHvY~pp~~~~ 183 (209)
++.|.+ ++++..|-||.||..+.
T Consensus 203 ~~~n~~-~~~~~~l~v~~p~~~d~ 225 (243)
T 3h7j_A 203 GAINRS-EKESKSINIFFPPRYNR 225 (243)
T ss_dssp EEEECS-SSCEEEEEEEESCSSCC
T ss_pred EeEeCC-CCCEEEEEEEcCChhcc
Confidence 999998 68999999999986653
No 23
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.15 E-value=2.8e-05 Score=56.45 Aligned_cols=89 Identities=11% Similarity=0.179 Sum_probs=70.6
Q ss_pred ccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCc
Q psy5204 69 NRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEND 148 (209)
Q Consensus 69 ~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~ 148 (209)
..+.+.+|.. ++.+++..+...||...|.|-|. ..-++.|++|+++... ++ ....+.+|+
T Consensus 21 ~g~~~~~l~~-~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~-----~~-------------~~~~l~~Gd 80 (116)
T 2pfw_A 21 GGLKRQMLGF-NHELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNV-----DG-------------VIKVLTAGD 80 (116)
T ss_dssp TTEEEEEEEE-ETTEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEE-----TT-------------EEEEECTTC
T ss_pred CCeEEEEEec-CCceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEE-----CC-------------EEEEeCCCC
Confidence 3466677764 35799999999999999999999 4778899999998765 11 367799999
Q ss_pred EEEEcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 149 VCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 149 v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
+.++++ +..|++.|.+ ++.-|-++.|+..
T Consensus 81 ~~~ip~-~~~H~~~~~~---~~~~l~v~~p~~~ 109 (116)
T 2pfw_A 81 SFFVPP-HVDHGAVCPT---GGILIDTFSPARE 109 (116)
T ss_dssp EEEECT-TCCEEEEESS---CEEEEEEEESCCG
T ss_pred EEEECc-CCceeeEeCC---CcEEEEEECCchh
Confidence 998876 5699999985 5677888888743
No 24
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.13 E-value=2e-05 Score=62.98 Aligned_cols=81 Identities=11% Similarity=0.105 Sum_probs=66.0
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
.+.+.++.+..+||..++.|-|.+ .-++.||+|+++... +++ ....+++||++ +.. ...|
T Consensus 76 ~~G~~~~~v~l~PG~~~~~H~H~~-eE~~~VLeGel~l~l----d~g-------------e~~~L~~GDsi-~~~-g~~H 135 (172)
T 3es1_A 76 DGGSVIRVVDMLPGKESPMHRTNS-IDYGIVLEGEIELEL----DDG-------------AKRTVRQGGII-VQR-GTNH 135 (172)
T ss_dssp TCSEEEEEEEECTTCBCCCBCCSE-EEEEEEEESCEEEEC----GGG-------------CEEEECTTCEE-EEC-SCCB
T ss_pred CCCeEEEEEEECCCCCCCCeecCc-eEEEEEEeCEEEEEE----CCC-------------eEEEECCCCEE-EeC-CCcE
Confidence 478899999999999999999995 456799999998763 111 36789999998 764 5699
Q ss_pred EEecCCCCCceEEEEEeCCCCC
Q psy5204 160 KVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 160 ~v~n~~~~~~avSLHvY~pp~~ 181 (209)
+..|.+ ++++.-|=|+.|+..
T Consensus 136 ~~~N~g-~~~ar~l~V~~P~~p 156 (172)
T 3es1_A 136 LWRNTT-DKPCRIAFILIEAPA 156 (172)
T ss_dssp EEECCS-SSCEEEEEEEEECCC
T ss_pred EEEeCC-CCCEEEEEEEcCCCc
Confidence 999998 689999999887643
No 25
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.13 E-value=5.2e-05 Score=55.30 Aligned_cols=89 Identities=11% Similarity=0.129 Sum_probs=69.3
Q ss_pred ceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceE-EeeCCcE
Q psy5204 71 YTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRT-ELAENDV 149 (209)
Q Consensus 71 Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~-~~~~G~v 149 (209)
..+.++. ++.|.+..+...||...+.|-|.. .-++.|++|+++... ++ ... .+.+|++
T Consensus 17 ~~~~~~~--~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i-----~~-------------~~~~~l~~Gd~ 75 (117)
T 2b8m_A 17 VVEKLVN--TEHVQINHIVLPRGEQMPKHYSNS-YVHLIIIKGEMTLTL-----ED-------------QEPHNYKEGNI 75 (117)
T ss_dssp EEEEEEE--CSSCEEEEEEEETTCBCCCEECSS-CEEEEEEESEEEEEE-----TT-------------SCCEEEETTCE
T ss_pred eeeeecC--CCceEEEEEEECCCCcCCCEeCCC-cEEEEEEeCEEEEEE-----CC-------------EEEEEeCCCCE
Confidence 5555554 578999999999999999999984 678899999998765 11 134 7899999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCCCCc
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPPFNI 182 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~~ 182 (209)
.++++ +..|++.|.+ ++++..+-++.|+...
T Consensus 76 i~ip~-~~~H~~~~~~-~~~~~~l~i~~~~~~~ 106 (117)
T 2b8m_A 76 VYVPF-NVKMLIQNIN-SDILEFFVVKAPHPKK 106 (117)
T ss_dssp EEECT-TCEEEEECCS-SSEEEEEEEECSCGGG
T ss_pred EEECC-CCcEEeEcCC-CCCEEEEEEECCCCCC
Confidence 99886 5699999997 5777777776666443
No 26
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.10 E-value=3.4e-05 Score=60.96 Aligned_cols=88 Identities=16% Similarity=0.112 Sum_probs=69.9
Q ss_pred ceEEeee-cCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE
Q psy5204 71 YTRNLVD-EGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 71 Y~R~ll~-~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v 149 (209)
..|..|. .....|.+..+...||..++.|-|.. .-++.|++|+++... ++ ....+.+||+
T Consensus 40 v~~r~L~~~~~~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v-----~g-------------~~~~l~~GD~ 100 (166)
T 3jzv_A 40 VTRQVLFSGNGLTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMV-----GR-------------AVSAVAPYDL 100 (166)
T ss_dssp EEEEEEECCTTCSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEE-----TT-------------EEEEECTTCE
T ss_pred eEEEEEECCCCCeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE-----CC-------------EEEEeCCCCE
Confidence 4555444 34578999999999999999999996 467889999998664 11 3678999999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
+++++ +..|++.|.+ +++++.|=++.++
T Consensus 101 i~ip~-g~~H~~~n~~-~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 101 VTIPG-WSWHQFRAPA-DEALGFLCMVNAE 128 (166)
T ss_dssp EEECT-TCCEEEECCT-TSCEEEEEEEESS
T ss_pred EEECC-CCcEEeEeCC-CCCEEEEEEEccC
Confidence 99876 5799999997 6888888777665
No 27
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.09 E-value=2.3e-05 Score=57.70 Aligned_cols=74 Identities=15% Similarity=0.243 Sum_probs=61.1
Q ss_pred cceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE
Q psy5204 70 RYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 70 ~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v 149 (209)
.-.+.++. ++.++++.+..+||+..+.|.|.. .-++.|++|+++... ++ ....+++||.
T Consensus 25 ~~~~~l~~--~~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i-----~~-------------~~~~l~~Gd~ 83 (114)
T 3fjs_A 25 TPSAALFK--EHRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGV-----DG-------------AQRRLHQGDL 83 (114)
T ss_dssp CCCEEEEE--ETTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEE-----TT-------------EEEEECTTEE
T ss_pred CeeEEEEe--CCCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEE-----CC-------------EEEEECCCCE
Confidence 34566664 579999999999999999999996 578899999998765 11 3678999999
Q ss_pred EEEcCCCCeEEEecCC
Q psy5204 150 CYINDSMGLHKVGNSG 165 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~ 165 (209)
.++++ +..|++.|.+
T Consensus 84 i~ip~-~~~H~~~~~~ 98 (114)
T 3fjs_A 84 LYLGA-GAAHDVNAIT 98 (114)
T ss_dssp EEECT-TCCEEEEESS
T ss_pred EEECC-CCcEEEEeCC
Confidence 99976 5799999986
No 28
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.03 E-value=8.9e-05 Score=58.35 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=65.8
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
..|.+..+...||..++.|-|.. .-++.|++|+++... ++ ....+.+||++++++ +..|+
T Consensus 54 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~i-----~~-------------~~~~l~~Gd~i~ip~-~~~H~ 113 (167)
T 3ibm_A 54 PAFETRYFEVEPGGYTTLERHEH-THVVMVVRGHAEVVL-----DD-------------RVEPLTPLDCVYIAP-HAWHQ 113 (167)
T ss_dssp SSEEEEEEEECTTCBCCCBBCSS-CEEEEEEESEEEEEE-----TT-------------EEEEECTTCEEEECT-TCCEE
T ss_pred CcEEEEEEEECCCCCCCCccCCC-cEEEEEEeCEEEEEE-----CC-------------EEEEECCCCEEEECC-CCcEE
Confidence 58999999999999999999984 677899999998764 11 367899999999886 57999
Q ss_pred EecCCCCCceEEEEEeCCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp~ 180 (209)
+.|.+.++++..|=++.++.
T Consensus 114 ~~n~~~~~~~~~l~i~~~~~ 133 (167)
T 3ibm_A 114 IHATGANEPLGFLCIVDSDR 133 (167)
T ss_dssp EEEESSSCCEEEEEEEESSC
T ss_pred EEeCCCCCCEEEEEEEeCCc
Confidence 99986247888888887663
No 29
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.02 E-value=5.8e-05 Score=60.66 Aligned_cols=87 Identities=17% Similarity=0.206 Sum_probs=68.2
Q ss_pred CCceEEEEEEccCCCc------cCCCCCC--CceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEE
Q psy5204 80 DGKFNLILLCWSQGQA------SSIHDHA--QAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCY 151 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~------spiHDH~--~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~ 151 (209)
++.+.+.++..+||.. ++.|-|. +..-++.|++|+.....=.. .+ ......+++||+++
T Consensus 64 ~~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~--~g-----------~~~~~~l~~GD~v~ 130 (190)
T 1x82_A 64 EGDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTP--EG-----------DAKWISMEPGTVVY 130 (190)
T ss_dssp TTCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECT--TC-----------CEEEEEECTTCEEE
T ss_pred CCCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCc--CC-----------cEEEEEECCCcEEE
Confidence 4688999999999999 8899997 44678999999998765210 01 01247899999998
Q ss_pred EcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 152 INDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 152 ~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
+++ ...|++.|.+ +++++-|=++.++..
T Consensus 131 ip~-g~~H~~~N~g-~~~~~~l~v~~~~~~ 158 (190)
T 1x82_A 131 VPP-YWAHRTVNIG-DEPFIFLAIYPADAG 158 (190)
T ss_dssp ECT-TCEEEEEECS-SSCEEEEEEEETTCC
T ss_pred ECC-CCeEEEEECC-cccEEEEEEECCCcc
Confidence 876 5699999998 688998989888864
No 30
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=97.98 E-value=5.4e-05 Score=61.22 Aligned_cols=89 Identities=13% Similarity=0.063 Sum_probs=69.9
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
..+++..+...||...++|-|..+.-++.|++|+++.....-...+.. + ....+.+||+.++++ ...|.
T Consensus 70 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~-------~---~~~~l~~GD~~~iP~-g~~H~ 138 (201)
T 1fi2_A 70 LGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNK-------L---YSRVVRAGETFVIPR-GLMHF 138 (201)
T ss_dssp SSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTC-------E---EEEEEETTCEEEECT-TCCEE
T ss_pred CceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCe-------E---EEEEECCCCEEEECC-CCeEE
Confidence 468999999999999999999976688999999998876421100000 1 167899999999876 56999
Q ss_pred EecCCCCCceEEEEEeCCCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp~~ 181 (209)
+.|.+ +++++.|=++.++..
T Consensus 139 ~~N~g-~~~~~~l~v~~~~~p 158 (201)
T 1fi2_A 139 QFNVG-KTEAYMVVSFNSQNP 158 (201)
T ss_dssp EEECS-SSCEEEEEEESSSCC
T ss_pred EEeCC-CCCEEEEEEECCCCC
Confidence 99998 589999999987754
No 31
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=97.97 E-value=3.1e-05 Score=57.28 Aligned_cols=91 Identities=14% Similarity=0.114 Sum_probs=66.2
Q ss_pred ccceEEeeec--CCCceEEEEEEccCCCccC-CCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEee
Q psy5204 69 NRYTRNLVDE--GDGKFNLILLCWSQGQASS-IHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELA 145 (209)
Q Consensus 69 ~~Y~R~ll~~--~~~~~~l~~~~W~pG~~sp-iHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~ 145 (209)
+.-.+..+.. +...+++.++...||...+ .|-|....-++.|++|+++... ++ ....+.
T Consensus 10 gg~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i-----~~-------------~~~~l~ 71 (125)
T 3cew_A 10 AQDARVELHDSLALTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI-----DG-------------EKIELQ 71 (125)
T ss_dssp CTTCCEECHHHHTCSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE-----TT-------------EEEEEE
T ss_pred CCcceEEEEcccCCCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE-----CC-------------EEEEeC
Confidence 3344444432 4678999999999999998 8999864344459999998764 11 367899
Q ss_pred CCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 146 ENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 146 ~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
+|+++++++ +..|++.|.+ ++++.-+=++.++
T Consensus 72 ~Gd~i~i~~-~~~H~~~~~~-~~~~~~~~i~~~~ 103 (125)
T 3cew_A 72 AGDWLRIAP-DGKRQISAAS-DSPIGFLCIQVKA 103 (125)
T ss_dssp TTEEEEECT-TCCEEEEEBT-TBCEEEEEEEEET
T ss_pred CCCEEEECC-CCcEEEEcCC-CCCEEEEEEEcCC
Confidence 999999886 5699999987 4666655555554
No 32
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=97.96 E-value=0.00014 Score=53.37 Aligned_cols=88 Identities=16% Similarity=0.132 Sum_probs=63.5
Q ss_pred ceEEeeecCCCceEEEEEEccCCCccCC---CCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCC
Q psy5204 71 YTRNLVDEGDGKFNLILLCWSQGQASSI---HDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEN 147 (209)
Q Consensus 71 Y~R~ll~~~~~~~~l~~~~W~pG~~spi---HDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G 147 (209)
..+.++. ++.|.+-.+ +.+|+.++. |+|.+ .-++.||+|+.+.+. ++.. ....+++|
T Consensus 21 ~~~~l~~--~~~~~i~~i-~~~g~~~~~~~~~~~~~-~E~~~Vl~G~~~l~~----~~~~------------~~~~l~~G 80 (112)
T 2opk_A 21 IFQPLLE--RKGLKIERI-ISNGQASPPGFWYDSPQ-DEWVMVVSGSAGIEC----EGDT------------APRVMRPG 80 (112)
T ss_dssp EEEEEEE--ETTEEEEEE-EESSCCCCTTCCBCCSS-EEEEEEEESCEEEEE----TTCS------------SCEEECTT
T ss_pred eEEEeec--CCCEEEEEE-EeCCccCCCCccccCCc-cEEEEEEeCeEEEEE----CCEE------------EEEEECCC
Confidence 4455554 468887666 588998887 77874 678899999998765 1110 12679999
Q ss_pred cEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 148 DVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 148 ~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
|..++++ ..-|++.|.+++.+++-|.|+.+|
T Consensus 81 d~i~ipa-~~~H~~~n~~~~~~~~~l~v~~~~ 111 (112)
T 2opk_A 81 DWLHVPA-HCRHRVAWTDGGEPTVWLAVHCDA 111 (112)
T ss_dssp EEEEECT-TCCEEEEEECSSSCEEEEEEEECC
T ss_pred CEEEECC-CCcEEEEeCCCCCCEEEEEEEEeC
Confidence 9999976 569999999854477767777654
No 33
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=97.95 E-value=4.2e-05 Score=56.93 Aligned_cols=89 Identities=16% Similarity=0.185 Sum_probs=67.1
Q ss_pred cceEEeeec--CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCC
Q psy5204 70 RYTRNLVDE--GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEN 147 (209)
Q Consensus 70 ~Y~R~ll~~--~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G 147 (209)
.+....|.. .+..+++..+...||...+.|-|.. .-++.|++|+++... ++ ....+.+|
T Consensus 33 g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i-----~~-------------~~~~l~~G 93 (126)
T 1vj2_A 33 GVRKRVLIGLKDAPNFVMRLFTVEPGGLIDRHSHPW-EHEIFVLKGKLTVLK-----EQ-------------GEETVEEG 93 (126)
T ss_dssp EEEEEEEECTTTCSSEEEEEEEEEEEEEEEEECCSS-CEEEEEEESEEEEEC-----SS-------------CEEEEETT
T ss_pred CeEEEEEeCCCCCCCEEEEEEEECCCCcCCceeCCC-cEEEEEEEeEEEEEE-----CC-------------EEEEECCC
Confidence 344444432 3568999999999999999999994 678999999998653 11 25779999
Q ss_pred cEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 148 DVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 148 ~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
+++++++ +..|++.|.+ ++++.-+=++.++
T Consensus 94 d~i~ip~-g~~H~~~~~~-~~~~~~l~v~~~~ 123 (126)
T 1vj2_A 94 FYIFVEP-NEIHGFRNDT-DSEVEFLCLIPKE 123 (126)
T ss_dssp EEEEECT-TCCEEEECCS-SSCEEEEEEEEGG
T ss_pred CEEEECC-CCcEEeEeCC-CCCEEEEEEEccC
Confidence 9999886 5699999987 4666666555543
No 34
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.93 E-value=0.00017 Score=55.38 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=65.4
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccce-EEeeCCcEEEEcCCCCe
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISR-TELAENDVCYINDSMGL 158 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~-~~~~~G~v~~~~~~~~i 158 (209)
...+++..+...||...+.|-|.. .-++.|++|+++... ++ .. ..+.+|+++++++ +..
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~-----~~-------------~~~~~l~~Gd~i~ip~-~~~ 104 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQE-----RG-------------KPARILKKGDVVEIPP-NVV 104 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEE-----TT-------------SCCEEEETTCEEEECT-TCC
T ss_pred CCcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEE-----CC-------------EEEEEECCCCEEEECC-CCc
Confidence 358999999999999999999996 678999999998764 11 13 6799999999876 569
Q ss_pred EEEecCCCCCceEEEEEeCCC
Q psy5204 159 HKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 159 H~v~n~~~~~~avSLHvY~pp 179 (209)
|++.|.+ ++++..|=|+.++
T Consensus 105 H~~~n~~-~~~~~~l~v~~~~ 124 (147)
T 2f4p_A 105 HWHGAAP-DEELVHIGISTQV 124 (147)
T ss_dssp EEEEEBT-TBCEEEEEEECCG
T ss_pred EEeEeCC-CCCEEEEEEEccC
Confidence 9999997 5788888888765
No 35
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.89 E-value=8.4e-05 Score=55.95 Aligned_cols=85 Identities=15% Similarity=0.215 Sum_probs=64.5
Q ss_pred ccceEE-eeecC---CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEe
Q psy5204 69 NRYTRN-LVDEG---DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTEL 144 (209)
Q Consensus 69 ~~Y~R~-ll~~~---~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~ 144 (209)
+.+.+. ++... ...+++..+..+||..++.|-|.+..-++.|++|+++... ++ ....+
T Consensus 39 g~~~~~~ll~p~~~~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i-----~~-------------~~~~l 100 (133)
T 1o4t_A 39 GEVEMAHLLSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD-----NG-------------KDVPI 100 (133)
T ss_dssp SEEEEEECSCTTTTTTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE-----TT-------------EEEEE
T ss_pred CeEEEEEccChhhCCCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE-----CC-------------EEEEe
Confidence 346665 66521 3456788889999999999999865778999999998764 11 36789
Q ss_pred eCCcEEEEcCCCCeEEEecCCCCCceEEE
Q psy5204 145 AENDVCYINDSMGLHKVGNSGPHPAAVSL 173 (209)
Q Consensus 145 ~~G~v~~~~~~~~iH~v~n~~~~~~avSL 173 (209)
.+||+.++++ ...|++.|.+ ++++..|
T Consensus 101 ~~Gd~i~i~~-~~~H~~~n~~-~~~~~~l 127 (133)
T 1o4t_A 101 KAGDVCFTDS-GESHSIENTG-NTDLEFL 127 (133)
T ss_dssp ETTEEEEECT-TCEEEEECCS-SSCEEEE
T ss_pred CCCcEEEECC-CCcEEeEECC-CCCEEEE
Confidence 9999999886 5699999997 4665544
No 36
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=97.89 E-value=4.9e-05 Score=60.47 Aligned_cols=83 Identities=13% Similarity=0.096 Sum_probs=66.2
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
..+++..+...||...++| |.++.-++.|++|+.+....... + .....+++||+.+++. ...|.
T Consensus 39 ~~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~~--~------------~~~~~l~~GDv~~~P~-g~~H~ 102 (178)
T 1dgw_A 39 RDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPD--G------------RDTYKLDQGDAIKIQA-GTPFY 102 (178)
T ss_dssp TTEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEETT--E------------EEEEEEETTEEEEECT-TCCEE
T ss_pred CcEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeCC--C------------cEEEEECCCCEEEECC-CCeEE
Confidence 5699999999999999999 98888999999999998875321 1 1367899999999875 56999
Q ss_pred EecCCCCCceEEEEEeCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp 179 (209)
+.|.++.++++-|=+..+.
T Consensus 103 ~~N~g~~~~l~~l~v~~~~ 121 (178)
T 1dgw_A 103 LINPDNNQNLRILKFAITF 121 (178)
T ss_dssp EEECCSSSCEEEEEEEECC
T ss_pred EEeCCCCCCEEEEEEECCC
Confidence 9999843366767666555
No 37
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=97.89 E-value=0.00019 Score=51.97 Aligned_cols=78 Identities=17% Similarity=0.293 Sum_probs=59.1
Q ss_pred CCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeC
Q psy5204 67 DENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAE 146 (209)
Q Consensus 67 ~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~ 146 (209)
.+....+..|.. ++.+.+.++...||+..+.|.|+. .-++.|++|+++... ++ ....+.+
T Consensus 23 ~~~~~~~~~l~~-~~~~~~~~~~~~~g~~~~~H~h~~-~e~~~vl~G~~~~~i-----~~-------------~~~~l~~ 82 (114)
T 2ozj_A 23 RENQVLSMALAQ-SDRVQISLFSFADGESVSEEEYFG-DTLYLILQGEAVITF-----DD-------------QKIDLVP 82 (114)
T ss_dssp CSSCEEEEECEE-CSSEEEEEEEEETTSSCCCBCCSS-CEEEEEEEEEEEEEE-----TT-------------EEEEECT
T ss_pred cCCCEEEEEEEc-CCCceEEEEEECCCCccccEECCC-CeEEEEEeCEEEEEE-----CC-------------EEEEecC
Confidence 334443333443 467888888899999999999995 678999999998664 11 3677999
Q ss_pred CcEEEEcCCCCeEEEecCC
Q psy5204 147 NDVCYINDSMGLHKVGNSG 165 (209)
Q Consensus 147 G~v~~~~~~~~iH~v~n~~ 165 (209)
||..++++ +..|++.|..
T Consensus 83 Gd~i~i~~-~~~H~~~~~~ 100 (114)
T 2ozj_A 83 EDVLMVPA-HKIHAIAGKG 100 (114)
T ss_dssp TCEEEECT-TCCBEEEEEE
T ss_pred CCEEEECC-CCcEEEEeCC
Confidence 99999886 5699999864
No 38
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=97.80 E-value=0.00024 Score=58.38 Aligned_cols=91 Identities=7% Similarity=0.094 Sum_probs=69.8
Q ss_pred hhhhhccCCccc-eEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccc
Q psy5204 60 WKRYAQFDENRY-TRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSE 138 (209)
Q Consensus 60 w~~~~~~~~~~Y-~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~ 138 (209)
+.....+.+..- .|.++. ++...+.+++..||+..|.|.|++ .-++.||+|+++.+. ++
T Consensus 15 l~~~~~~~~~~~~sr~l~~--~~~~~~~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i-----~~------------ 74 (227)
T 3rns_A 15 FNRLITSKEAEVVSMRILN--QPNSYISLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFI-----EN------------ 74 (227)
T ss_dssp HHHHCCCCTTCEEEEEEEE--CSSEEEEEEEECTTCEEEECSCSS-CEEEEEEESEEEEEE-----SS------------
T ss_pred HHHcCCcCCCCEEEEehhc--CCCcEEEEEEECCCCccCccccCC-CEEEEEEeCEEEEEE-----CC------------
Confidence 445556667664 566654 578999999999999999999985 678999999999876 11
Q ss_pred cceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEE
Q psy5204 139 ISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 139 ~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
....+++||..++++ +..|.+.|.+ .+.-|=+
T Consensus 75 -~~~~l~~Gd~~~~p~-~~~H~~~a~~---~~~~l~i 106 (227)
T 3rns_A 75 -NKKTISNGDFLEITA-NHNYSIEARD---NLKLIEI 106 (227)
T ss_dssp -CEEEEETTEEEEECS-SCCEEEEESS---SEEEEEE
T ss_pred -EEEEECCCCEEEECC-CCCEEEEECC---CcEEEEE
Confidence 367899999998876 5699999874 3444434
No 39
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=97.73 E-value=0.00035 Score=51.43 Aligned_cols=78 Identities=14% Similarity=0.049 Sum_probs=62.2
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
+..|++......||..++.|-|. ..-++.|++|+.+... ++ ....+++|+++++++ +..|
T Consensus 31 ~~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i-----~~-------------~~~~l~~Gd~~~i~~-~~~H 90 (128)
T 4i4a_A 31 NTPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRI-----ND-------------EDFPVTKGDLIIIPL-DSEH 90 (128)
T ss_dssp CCSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEE-----TT-------------EEEEEETTCEEEECT-TCCE
T ss_pred CCCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEE-----CC-------------EEEEECCCcEEEECC-CCcE
Confidence 46899999999999999999997 5789999999998765 11 367899999999986 5799
Q ss_pred EEecCCCCCceEEEEEeCC
Q psy5204 160 KVGNSGPHPAAVSLHLYSP 178 (209)
Q Consensus 160 ~v~n~~~~~~avSLHvY~p 178 (209)
++.|.+ ++++..+=+|-+
T Consensus 91 ~~~~~~-~~~~~~~~i~f~ 108 (128)
T 4i4a_A 91 HVINNN-QEDFHFYTIWWD 108 (128)
T ss_dssp EEEECS-SSCEEEEEEEEC
T ss_pred EeEeCC-CCCEEEEEEEEC
Confidence 999987 465554444433
No 40
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=97.73 E-value=0.0001 Score=61.71 Aligned_cols=96 Identities=11% Similarity=0.049 Sum_probs=65.6
Q ss_pred CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEee--CCCCCCCCCCCCccccccceEEeeCCcEEEEcCCC
Q psy5204 79 GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQ--EPNHTSDEIGQDRPLSEISRTELAENDVCYINDSM 156 (209)
Q Consensus 79 ~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~--~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~ 156 (209)
.+..|+++.+..+||...+.|-|....=++.||+|+++...-. .++.+...+.+.+.-.......+++||+.++++ +
T Consensus 39 ~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~-g 117 (239)
T 2xlg_A 39 KDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPN-H 117 (239)
T ss_dssp TTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECT-T
T ss_pred CCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECC-C
Confidence 3578999999999999999999997677889999998876510 010000000000001111267899999998876 5
Q ss_pred CeEEEecCCCCCceEE-EEEe
Q psy5204 157 GLHKVGNSGPHPAAVS-LHLY 176 (209)
Q Consensus 157 ~iH~v~n~~~~~~avS-LHvY 176 (209)
..|.+.|.+ ++++.- |-++
T Consensus 118 ~~H~~~N~~-~~~~~~~l~~~ 137 (239)
T 2xlg_A 118 YMHGFVNPT-DKTLPIVFVWM 137 (239)
T ss_dssp EEEEEECCS-SSCEEEEEEEE
T ss_pred CCEEEEeCC-CCCEEEEEEEE
Confidence 699999998 577666 6666
No 41
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=97.72 E-value=0.00039 Score=57.05 Aligned_cols=81 Identities=9% Similarity=0.139 Sum_probs=62.2
Q ss_pred hccCCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEE
Q psy5204 64 AQFDENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTE 143 (209)
Q Consensus 64 ~~~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~ 143 (209)
..+.++...+..|.. ++.+++.++.++||+..+.|.|.+ .-++.||+|+.+.+. ++ ....
T Consensus 135 ~~~~~g~~~~~~l~~-~~~~~~~~~~~~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i-----~g-------------~~~~ 194 (227)
T 3rns_A 135 VEYQEGKIVSKNLVA-KPNLVMTIMSFWKGESLDPHKAPG-DALVTVLDGEGKYYV-----DG-------------KPFI 194 (227)
T ss_dssp SCCCTTCEEEEEEEE-ETTEEEEEEEECTTCEEEEECCSS-EEEEEEEEEEEEEEE-----TT-------------EEEE
T ss_pred cccCCCCEEEEEEEE-CCCeEEEEEEECCCCccCCEECCC-cEEEEEEeEEEEEEE-----CC-------------EEEE
Confidence 344445544444444 568999999999999999999995 568999999998764 11 3678
Q ss_pred eeCCcEEEEcCCCCeEEEec-CC
Q psy5204 144 LAENDVCYINDSMGLHKVGN-SG 165 (209)
Q Consensus 144 ~~~G~v~~~~~~~~iH~v~n-~~ 165 (209)
+.+||..++++ ...|++.| .+
T Consensus 195 l~~Gd~i~ip~-~~~H~~~~~~~ 216 (227)
T 3rns_A 195 VKKGESAVLPA-NIPHAVEAETE 216 (227)
T ss_dssp EETTEEEEECT-TSCEEEECCSS
T ss_pred ECCCCEEEECC-CCcEEEEeCCC
Confidence 99999988876 56999999 53
No 42
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=97.72 E-value=0.00025 Score=58.82 Aligned_cols=82 Identities=10% Similarity=0.112 Sum_probs=64.3
Q ss_pred ceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEE
Q psy5204 71 YTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVC 150 (209)
Q Consensus 71 Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~ 150 (209)
-++..+.. ...++.++..+||...|.|.|.. .-++.|++|+++.+. ++ ....+.+|+.+
T Consensus 24 v~~~~l~~--~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~~-----~~-------------~~~~l~~Gd~i 82 (243)
T 3h7j_A 24 VRQYSTVR--GDTEVLMSYVPPHTNVEPHQHKE-VQIGMVVSGELMMTV-----GD-------------VTRKMTALESA 82 (243)
T ss_dssp CEEEEEEE--TTEEEEEEEECTTEEEEEECCSS-EEEEEEEESEEEEEE-----TT-------------EEEEEETTTCE
T ss_pred eEEEEEEC--CCCEEEEEEECCCCccCCEECCC-cEEEEEEEeEEEEEE-----CC-------------EEEEECCCCEE
Confidence 45555553 23467777899999999999994 678999999998775 11 36789999988
Q ss_pred E-EcCCCCeEEEecCCCCCceEEEEE
Q psy5204 151 Y-INDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 151 ~-~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
+ +++ +..|++.|.+ +++++.|.+
T Consensus 83 ~~ip~-~~~H~~~n~~-~~~~~~l~i 106 (243)
T 3h7j_A 83 YIAPP-HVPHGARNDT-DQEVIAIDI 106 (243)
T ss_dssp EEECT-TCCEEEEECS-SSCEEEEEE
T ss_pred EEcCC-CCcEeeEeCC-CCcEEEEEE
Confidence 7 654 6799999998 588988887
No 43
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=97.71 E-value=0.00022 Score=62.72 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=73.5
Q ss_pred ceEEeeecC---CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCC
Q psy5204 71 YTRNLVDEG---DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEN 147 (209)
Q Consensus 71 Y~R~ll~~~---~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G 147 (209)
+.|.++... ...+++..+...||...+.|-|.++.-++.|++|+++.+.... ++. .....+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~--~g~-----------~~~~~l~~G 308 (385)
T 1j58_A 242 KVYIADSTNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFAS--DGH-----------ARTFNYQAG 308 (385)
T ss_dssp EEEEESTTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEE--TTE-----------EEEEEEESS
T ss_pred eEEEeecccCCcccceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcC--CCc-----------EEEEEEcCC
Confidence 455555431 2369999999999999999999976788999999998876421 110 136789999
Q ss_pred cEEEEcCCCCeEEEecCCCCCceEEEEEeCCCC
Q psy5204 148 DVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 148 ~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
|+.++++ ...|.+.|.+ ++++.-|-++.++.
T Consensus 309 D~~~ip~-~~~H~~~n~~-~~~~~~l~v~~~~~ 339 (385)
T 1j58_A 309 DVGYVPF-AMGHYVENIG-DEPLVFLEIFKDDH 339 (385)
T ss_dssp CEEEECT-TCBEEEEECS-SSCEEEEEEESSSS
T ss_pred CEEEECC-CCeEEEEECC-CCCEEEEEEECCCC
Confidence 9999876 5699999998 58888888887763
No 44
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.00034 Score=55.41 Aligned_cols=77 Identities=10% Similarity=0.094 Sum_probs=60.6
Q ss_pred CCceEEEEEEccC-CCccCC-CCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC
Q psy5204 80 DGKFNLILLCWSQ-GQASSI-HDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG 157 (209)
Q Consensus 80 ~~~~~l~~~~W~p-G~~spi-HDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~ 157 (209)
.+.++.+++..+| |..++. |.|. ..-++.||+|+++.+. ++ ....+.+|+..++++ ..
T Consensus 85 ~~~~~~~~v~lpP~G~~~~~~~~h~-gEE~~yVLeG~v~vtl-----~g-------------~~~~L~~Gds~~iP~-g~ 144 (166)
T 2vpv_A 85 KEYFASGILKLPAISGQKKLSNSFR-TYITFHVIQGIVEVTV-----CK-------------NKFLSVKGSTFQIPA-FN 144 (166)
T ss_dssp TCSCEEEEEEECSSGGGCEEEECCS-EEEEEEEEESEEEEEE-----TT-------------EEEEEETTCEEEECT-TC
T ss_pred cccceeEEEEECCCCCCCCCccCCC-ceEEEEEEEeEEEEEE-----CC-------------EEEEEcCCCEEEECC-CC
Confidence 4689999999999 776555 5666 4778999999999886 11 367899999999876 56
Q ss_pred eEEEecCCCCCceEEEEEeC
Q psy5204 158 LHKVGNSGPHPAAVSLHLYS 177 (209)
Q Consensus 158 iH~v~n~~~~~~avSLHvY~ 177 (209)
-|++.|.+ +++|.-|-|-+
T Consensus 145 ~H~~~N~~-d~~Arll~Vq~ 163 (166)
T 2vpv_A 145 EYAIANRG-NDEAKMFFVQV 163 (166)
T ss_dssp EEEEEECS-SSCEEEEEEEE
T ss_pred CEEEEECC-CCCEEEEEEEE
Confidence 99999998 57887776643
No 45
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.59 E-value=0.00065 Score=56.49 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=67.9
Q ss_pred cchhhhhccCCccceEEee-ec-CCCceEEEEEEccCCCccCC-CCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCc
Q psy5204 58 DDWKRYAQFDENRYTRNLV-DE-GDGKFNLILLCWSQGQASSI-HDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDR 134 (209)
Q Consensus 58 ~~w~~~~~~~~~~Y~R~ll-~~-~~~~~~l~~~~W~pG~~spi-HDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~ 134 (209)
+++..........+.+..| -. ....+++..+..+||..++. |-|.... .+.||+|++..+. ++
T Consensus 138 ~dv~~~~~~~~~g~~~r~l~p~~~~~~~~~~~~tl~PG~~~~~~~~h~~ee-~~~vLeG~~~~~~-----~~-------- 203 (246)
T 1sfn_A 138 RENPGYPFEGDDHLIARKLLPDEPAFDFMVSTMSFAPGASLPYAEVHYMEH-GLLMLEGEGLYKL-----EE-------- 203 (246)
T ss_dssp TTCCCEETTSCTTEEEEECSCCCTTCSEEEEEEEECTTCBCSSCBCCSSCE-EEEEEECEEEEEE-----TT--------
T ss_pred hhCCccccCCCCCeEEEEeCCCccCCCeEEEEEEECCCCccCcccCCCceE-EEEEEECEEEEEE-----CC--------
Confidence 3443333333344655544 32 35789999999999999996 5677544 5899999998775 11
Q ss_pred cccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEe
Q psy5204 135 PLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLY 176 (209)
Q Consensus 135 ~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY 176 (209)
....+++||+.++.+ ..-|++.|.+ ++++ .+-+|
T Consensus 204 -----~~~~l~~GD~~~~~~-~~pH~~~n~g-~~~~-~yl~~ 237 (246)
T 1sfn_A 204 -----NYYPVTAGDIIWMGA-HCPQWYGALG-RNWS-KYLLY 237 (246)
T ss_dssp -----EEEEEETTCEEEECT-TCCEEEEEES-SSCE-EEEEE
T ss_pred -----EEEEcCCCCEEEECC-CCCEEEEcCC-CCCE-EEEEE
Confidence 367899999999986 5799999998 5676 33343
No 46
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.59 E-value=0.00099 Score=53.77 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=60.2
Q ss_pred cceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE
Q psy5204 70 RYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 70 ~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v 149 (209)
+-.|..|+. ++...+.++.|.||...|.|.|++. =+..||+|.+. ++ ...+.+|+.
T Consensus 113 Gv~~~~L~~-~~~~~v~l~~~~pG~~~p~H~H~g~-E~~~VL~G~f~-------de---------------~~~~~~Gd~ 168 (195)
T 2q1z_B 113 GVRQAILPT-GGEAIARLLWIPGGQAVPDHGHRGL-ELTLVLQGAFR-------DE---------------TDRFGAGDI 168 (195)
T ss_dssp SCEEEEECC-SSSSEEEEEEECTTCBCCCCCCSSC-EEEEEEESEEE-------CS---------------SSEEETTCE
T ss_pred CeEEEEEec-CCCcEEEEEEECCCCCCCCcCCCCe-EEEEEEEEEEE-------CC---------------cEEECCCeE
Confidence 356777775 4567888999999999999999975 56789999976 11 235889998
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEE
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
.++++ +..|+..+.+ ++.++-|=+
T Consensus 169 ~~~p~-g~~H~p~a~~-~~gc~~l~~ 192 (195)
T 2q1z_B 169 EIADQ-ELEHTPVAER-GLDCICLAA 192 (195)
T ss_dssp EEECS-SCCCCCEECS-SSCEEEEEE
T ss_pred EEeCc-CCccCCEeCC-CCCEEEEEE
Confidence 77765 5699988864 356766544
No 47
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=97.58 E-value=0.0011 Score=54.63 Aligned_cols=117 Identities=11% Similarity=0.178 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHHhhcCccchh-hhhc--cCC---ccceEEeeec-----CCCceEEEEEEccCCCccCCCCCCCceEEEE
Q psy5204 41 VDVAHVKFLMESYVSNADDWK-RYAQ--FDE---NRYTRNLVDE-----GDGKFNLILLCWSQGQASSIHDHAQAHCFMK 109 (209)
Q Consensus 41 ~~~~~v~~ll~~l~~~~~~w~-~~~~--~~~---~~Y~R~ll~~-----~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~ 109 (209)
...+.|...|+++.- .-.|. .|.. +.+ ++|.=..|.- ..+.+.+.+..++||...|.|.|.+ .-++.
T Consensus 80 ~~~~~L~~al~~~~~-~L~Wr~~y~~~~~~~~f~~~~a~~elvGP~g~~~s~~l~lG~v~l~PG~~yP~HsHp~-EEiy~ 157 (217)
T 4b29_A 80 DQSQPLRDALVAAAP-HVEWRHSYTEAEVGRDFLNRFGWFELAGPSGHFLTQSLRVTVGYWGPGLDYGWHEHLP-EELYS 157 (217)
T ss_dssp TTTHHHHHHHHHHGG-GSBCBCCSCHHHHCHHHHHHEEEEEEEETTSSEECSSCEEEEEEECSSCEEEEEECSS-EEEEE
T ss_pred ccHHHHHHHHHHhCC-CCeEeeccCCCCcChhHHhCceEEEEECCCCCCCCCeEEEEEEEECCCCcCCCCCCCC-ceEEE
Confidence 456677777777765 35675 2222 222 2344333331 2578999999999999999999996 67899
Q ss_pred EEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 110 MLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 110 vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
||+|.++-+. +++ ....+++|+++++.+ +-.|.+++. ++|.+.|=+|..+
T Consensus 158 VLsG~~e~~v----~~g-------------~~~~l~pGd~v~ips-gv~Ha~rt~--dePllalwvW~G~ 207 (217)
T 4b29_A 158 VVSGRALFHL----RNA-------------PDLMLEPGQTRFHPA-NAPHAMTTL--TDPILTLVLWRGA 207 (217)
T ss_dssp EEEECEEEEE----TTS-------------CCEEECTTCEEEECT-TCCEEEECC--SSCEEEEEEEEST
T ss_pred EEeCCEEEEE----CCC-------------CEEecCCCCEEEcCC-CCceeEEEC--CccEEEEEEEeCC
Confidence 9999988664 111 367899999988875 569999964 5899999888554
No 48
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.57 E-value=0.00069 Score=53.53 Aligned_cols=98 Identities=10% Similarity=0.079 Sum_probs=66.7
Q ss_pred cceEEeeec-CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCc
Q psy5204 70 RYTRNLVDE-GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEND 148 (209)
Q Consensus 70 ~Y~R~ll~~-~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~ 148 (209)
.-.+..|+. +...-.+.++.|+||...|.|.|.+ .-.+.||+|++... +. ....+.+|+
T Consensus 29 GV~~~~L~~~~~~g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~-----~~--------------~~~~~~aGd 88 (165)
T 3cjx_A 29 GTDIFPLFMDPYNGLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT-----EY--------------PGQKQTAGC 88 (165)
T ss_dssp TEEEEEEEEETTTTEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET-----TC--------------TTSCEETTE
T ss_pred CEEEEEeEeCCCCCcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC-----CC--------------ceEEECCCe
Confidence 344454442 3345678899999999999999986 46788999999741 11 023478999
Q ss_pred EEEEcCCCCeEEEecCCC-CCceEEEEEeCCCCCcceEEECCCC
Q psy5204 149 VCYINDSMGLHKVGNSGP-HPAAVSLHLYSPPFNICSSFDAQTG 191 (209)
Q Consensus 149 v~~~~~~~~iH~v~n~~~-~~~avSLHvY~pp~~~~~~yd~~~g 191 (209)
..+.++ +..|...+..+ ++.++.|=+.-.| ...+|+...
T Consensus 89 ~~~~P~-g~~H~~~a~~~~~~gci~l~v~~Gp---L~~~~~~~~ 128 (165)
T 3cjx_A 89 YLYEPG-GSIHQFNTPRDNEGQTEVIFMLSGC---NVNFTQDGT 128 (165)
T ss_dssp EEEECT-TCEECEECCTTCSSCEEEEEEEESC---EEEECTTCC
T ss_pred EEEeCC-CCceeeEeCCCCCCCcEEEEEEecc---ceecCCCCC
Confidence 877765 56999988642 3478777665555 456666533
No 49
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.56 E-value=0.00044 Score=60.11 Aligned_cols=84 Identities=18% Similarity=0.214 Sum_probs=68.8
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+++..+...||...+.|-|.++.-++.|++|+++.+.+.. ++. .....+++||+.++++ ...|.+
T Consensus 233 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~--~g~-----------~~~~~l~~GD~~~ip~-~~~H~~ 298 (361)
T 2vqa_A 233 NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFAS--EGK-----------ASVSRLQQGDVGYVPK-GYGHAI 298 (361)
T ss_dssp TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECS--TTC-----------EEEEEECTTCEEEECT-TCEEEE
T ss_pred cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcC--CCc-----------EEEEEECCCCEEEECC-CCeEEe
Confidence 69999999999999999999976778999999999887631 110 1267899999999875 569999
Q ss_pred ecCCCCCceEEEEEeCCCC
Q psy5204 162 GNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 162 ~n~~~~~~avSLHvY~pp~ 180 (209)
.|.+ ++++.-|=++.++.
T Consensus 299 ~n~~-~~~~~~l~~~~~~~ 316 (361)
T 2vqa_A 299 RNSS-QKPLDIVVVFNDGD 316 (361)
T ss_dssp ECCS-SSCEEEEEEESSSS
T ss_pred EECC-CCCEEEEEEECCCC
Confidence 9998 57888888887764
No 50
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=97.52 E-value=0.00073 Score=57.36 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=59.0
Q ss_pred CCceEEEEEEccCCCcc--CCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC
Q psy5204 80 DGKFNLILLCWSQGQAS--SIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG 157 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~s--piHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~ 157 (209)
...|+++.+..+||..+ +.|.|. ..-++.||+|+++.+. ++ ....+++||.+++++ ..
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v-----~g-------------~~~~L~~GD~i~ip~-~~ 124 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTL-----QG-------------QVHAMQPGGYAFIPP-GA 124 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEE-----SS-------------CEEEECTTEEEEECT-TC
T ss_pred CCcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEE-----CC-------------EEEEECCCCEEEECC-CC
Confidence 57899999999999987 668898 4678999999998775 11 367899999999876 56
Q ss_pred eEEEecCCCCCceEEE
Q psy5204 158 LHKVGNSGPHPAAVSL 173 (209)
Q Consensus 158 iH~v~n~~~~~~avSL 173 (209)
.|++.|.+ ++++.-|
T Consensus 125 ~H~~~N~g-~~~~~~l 139 (278)
T 1sq4_A 125 DYKVRNTT-GQHTRFH 139 (278)
T ss_dssp CEEEECCS-SSCEEEE
T ss_pred cEEEEECC-CCCEEEE
Confidence 99999998 4665443
No 51
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=97.51 E-value=0.0016 Score=58.18 Aligned_cols=111 Identities=11% Similarity=0.123 Sum_probs=77.9
Q ss_pred HHHHHHHHHHhhcC--ccchhhhhccCCccceEEeeec-----CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEE
Q psy5204 43 VAHVKFLMESYVSN--ADDWKRYAQFDENRYTRNLVDE-----GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCL 115 (209)
Q Consensus 43 ~~~v~~ll~~l~~~--~~~w~~~~~~~~~~Y~R~ll~~-----~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l 115 (209)
-+++++.|.++... ++++ ++....++.- ....+.+.+...+||..++.|-|.. ..++.||+|+-
T Consensus 255 w~~~~~~L~~~~~~~~~~~~--------~~~~l~l~nP~~g~~~~~tl~~~~~~l~PG~~~~~HrH~~-~~v~~VleG~G 325 (394)
T 3bu7_A 255 WEPTYEALLNYAKASDGSPY--------DGLILRYTNPQTGGHPMLTMGASMQMLRPGEHTKAHRHTG-NVIYNVAKGQG 325 (394)
T ss_dssp HHHHHHHHHHHHTTCCCBTT--------TBEEEEECCTTTSSCSSSSCEEEEEEECTTCBCCCEEESS-CEEEEEEECCE
T ss_pred HHHHHHHHHHhhhccCcCcC--------CceEEEEeCCCCCCCCCCeeeEEEEEECCCCcCCCcccCC-cEEEEEEeCeE
Confidence 46777777776532 3333 2233333331 1246788899999999999999996 46899999987
Q ss_pred EEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 116 TEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 116 ~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
.... ++ .+..+++||++++.+ ...|++.|.+.+++++-|.+--+|+.
T Consensus 326 ~~~V-----~g-------------e~~~~~~GD~~~iP~-g~~H~~~N~g~~e~~~ll~i~D~Pl~ 372 (394)
T 3bu7_A 326 YSIV-----GG-------------KRFDWSEHDIFCVPA-WTWHEHCNTQERDDACLFSFNDFPVM 372 (394)
T ss_dssp EEEE-----TT-------------EEEEECTTCEEEECT-TCCEEEEECCSSCCEEEEEEESHHHH
T ss_pred EEEE-----CC-------------EEEEEeCCCEEEECC-CCeEEeEeCCCCCCeEEEEeeCHHHH
Confidence 4443 11 368899999988775 56999999974578888887666654
No 52
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=97.50 E-value=0.00026 Score=63.68 Aligned_cols=83 Identities=16% Similarity=0.100 Sum_probs=67.8
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
+.+++..+...||...++| |.++.-++.|++|+.+.....- +. . .+..+++||+.++++ +.+|.
T Consensus 47 ~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~--~~---------~---~~~~l~~GDv~~iP~-G~~H~ 110 (416)
T 1uij_A 47 RDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN--DD---------R---DSYNLHPGDAQRIPA-GTTYY 110 (416)
T ss_dssp TTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS--SC---------E---EEEEECTTEEEEECT-TCEEE
T ss_pred ccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC--CC---------C---eEEEecCCCEEEECC-CCeEE
Confidence 4599999999999999999 8888899999999999887632 11 1 367899999998875 56999
Q ss_pred EecCCCCCceEEEEEeCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp 179 (209)
+.|.+.+++++-|=++.+.
T Consensus 111 ~~N~gg~e~l~~l~~~~~~ 129 (416)
T 1uij_A 111 LVNPHDHQNLKMIWLAIPV 129 (416)
T ss_dssp EEECCSSCCEEEEEEEEES
T ss_pred EEecCCCCCEEEEEEeccC
Confidence 9999436888888887653
No 53
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=97.49 E-value=0.0003 Score=63.65 Aligned_cols=83 Identities=14% Similarity=0.111 Sum_probs=67.6
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
+.+++..+...||...++| |.++.-++.|++|+.+..... + +. .....+++||+.++++ +.+|.
T Consensus 59 ~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~-~-~~------------~~~~~l~~GDv~~iP~-G~~H~ 122 (434)
T 2ea7_A 59 ENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVN-P-DS------------RDSYILEQGHAQKIPA-GTTFF 122 (434)
T ss_dssp TTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC-S-SC------------EEEEEEETTEEEEECT-TCEEE
T ss_pred ccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEe-C-CC------------CEEEEeCCCCEEEECC-CccEE
Confidence 3499999999999999999 998899999999999988763 1 11 1367899999999875 56999
Q ss_pred EecCCCCCceEEEEEeCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp 179 (209)
+.|.+++++++-|=++.+.
T Consensus 123 ~~N~g~~e~l~~l~~~~~s 141 (434)
T 2ea7_A 123 LVNPDDNENLRIIKLAIPV 141 (434)
T ss_dssp EEECCSSCCEEEEEEEEES
T ss_pred EEeCCCCCCeEEEEEecCC
Confidence 9999745788888776543
No 54
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.47 E-value=0.00036 Score=58.34 Aligned_cols=88 Identities=10% Similarity=0.044 Sum_probs=63.6
Q ss_pred eEEeeec-CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEE
Q psy5204 72 TRNLVDE-GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVC 150 (209)
Q Consensus 72 ~R~ll~~-~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~ 150 (209)
.|.++.. ....+++..+...||...+.|-|.+..=++.||+|+++... ++ ....+++||++
T Consensus 167 ~~~l~~~~~~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i-----~~-------------~~~~l~~GD~i 228 (261)
T 1rc6_A 167 LLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL-----DN-------------NWIPVKKGDYI 228 (261)
T ss_dssp EEECSCCSTTCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES-----SS-------------CEEEEETTCEE
T ss_pred EEEecCcccCCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE-----CC-------------EEEEeCCCCEE
Confidence 3445543 24678999999999999999999755667899999998653 11 36789999999
Q ss_pred EEcCCCCeEEEecCCCC-CceEEEEEeCCCC
Q psy5204 151 YINDSMGLHKVGNSGPH-PAAVSLHLYSPPF 180 (209)
Q Consensus 151 ~~~~~~~iH~v~n~~~~-~~avSLHvY~pp~ 180 (209)
++.+ ...|++.|.+ + +++. +-+|....
T Consensus 229 ~~~~-~~~H~~~n~g-~~~~~~-~l~~~d~~ 256 (261)
T 1rc6_A 229 FMGA-YSLQAGYGVG-RGEAFS-YIYSKDCN 256 (261)
T ss_dssp EECS-SEEEEEEEC-----CEE-EEEEEECS
T ss_pred EECC-CCcEEeEeCC-CCcCEE-EEEEecCC
Confidence 9976 5699999997 4 5544 44564443
No 55
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.45 E-value=0.0005 Score=57.49 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=59.1
Q ss_pred CCceEEEEEEccCCCccCCCCC-CCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCe
Q psy5204 80 DGKFNLILLCWSQGQASSIHDH-AQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGL 158 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH-~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~i 158 (209)
...|+++++...||..++.|-| .+..-++.||+|+++.+. ++ ....+++||..++++ ..-
T Consensus 56 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~-----~~-------------~~~~L~~Gd~~~~~~-~~~ 116 (261)
T 1rc6_A 56 GASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA-----EG-------------KTFALSEGGYLYCPP-GSL 116 (261)
T ss_dssp TCSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE-----TT-------------EEEEEETTEEEEECT-TCC
T ss_pred CCcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE-----CC-------------EEEEECCCCEEEECC-CCC
Confidence 5789999999999998876654 344678899999999875 11 367899999999986 468
Q ss_pred EEEecCCCCCceEEEEE
Q psy5204 159 HKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 159 H~v~n~~~~~~avSLHv 175 (209)
|++.|.+ ++++.-|=+
T Consensus 117 H~~~N~~-~~~~~~l~v 132 (261)
T 1rc6_A 117 MTFVNAQ-AEDSQIFLY 132 (261)
T ss_dssp CEEEECS-SSCEEEEEE
T ss_pred EEEEeCC-CCCEEEEEE
Confidence 9999998 566654443
No 56
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.44 E-value=0.0008 Score=58.47 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=68.2
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
..+++..+...||...++|-|.++.-++.|++|+.+.+.... ++. .....+++||+.++++ +..|.
T Consensus 50 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~--~g~-----------~~~~~l~~GD~~~ip~-g~~H~ 115 (361)
T 2vqa_A 50 KGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSP--EGK-----------VEIADVDKGGLWYFPR-GWGHS 115 (361)
T ss_dssp CSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECT--TSC-----------EEEEEEETTEEEEECT-TCEEE
T ss_pred cceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeC--CCc-----------EEEEEEcCCCEEEECC-CCeEE
Confidence 467888999999999999999966789999999999887632 111 1247899999999875 56999
Q ss_pred EecCCCCCceEEEEEeCCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp~ 180 (209)
+.|.+ ++++.-|=++.++.
T Consensus 116 ~~n~~-~~~~~~l~v~~~~~ 134 (361)
T 2vqa_A 116 IEGIG-PDTAKFLLVFNDGT 134 (361)
T ss_dssp EEECS-SSCEEEEEEESSTT
T ss_pred EEeCC-CCCEEEEEEECCCC
Confidence 99997 57888888877763
No 57
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.43 E-value=0.00041 Score=62.99 Aligned_cols=93 Identities=13% Similarity=0.085 Sum_probs=72.3
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
+.+++..+...||...++| |.++.-++.|++|+.+.....- ++ ..+..+++||+.+++. ...|.
T Consensus 84 g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~--~~------------~~~~~l~~GDv~~~P~-G~~H~ 147 (445)
T 2cav_A 84 RDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP--DG------------RDTYKLDQGDAIKIQA-GTPFY 147 (445)
T ss_dssp TTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEET--TE------------EEEEEEETTEEEEECT-TCCEE
T ss_pred CcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeC--CC------------CEEEEecCCCEEEECC-CCcEE
Confidence 4499999999999999999 8888999999999999887642 11 0367899999999875 56999
Q ss_pred EecCCCCCceEEEEEeCCCCC--cceEEECC
Q psy5204 161 VGNSGPHPAAVSLHLYSPPFN--ICSSFDAQ 189 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp~~--~~~~yd~~ 189 (209)
+.|.+++++++-|=++.+... ....|-+.
T Consensus 148 ~~N~g~~~~l~~l~v~~~~~~pg~~~~F~la 178 (445)
T 2cav_A 148 LINPDNNQNLRILKFAITFRRPGTVEDFFLS 178 (445)
T ss_dssp EEECCSSCCEEEEEEEECCSSTTCCCEEESS
T ss_pred EEECCCCCCEEEEEEeccCCCCCceeeeecc
Confidence 999974578888888876532 34444443
No 58
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=97.42 E-value=0.00079 Score=50.07 Aligned_cols=81 Identities=14% Similarity=0.123 Sum_probs=55.6
Q ss_pred CCceEEEEEE--ccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC
Q psy5204 80 DGKFNLILLC--WSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG 157 (209)
Q Consensus 80 ~~~~~l~~~~--W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~ 157 (209)
++.+.+.++. -+||...+.|-|.+..-++.|++|+++... +++ ....+.+||++++++ +.
T Consensus 38 ~g~~~~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~----~~~-------------~~~~l~~Gd~~~ip~-g~ 99 (134)
T 2o8q_A 38 GGMFGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEY----EDI-------------GAVMLEAGGSAFQPP-GV 99 (134)
T ss_dssp TTSCEEEEEEECC-----CCCEEECCSCEEEEEEESEEEEEE----TTT-------------EEEEEETTCEEECCT-TC
T ss_pred CCceEEEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEE----CCc-------------EEEEecCCCEEEECC-CC
Confidence 4667644444 458999999999975778999999998765 110 367899999988876 56
Q ss_pred eEEEecCCCCCceEEEEEeCCCC
Q psy5204 158 LHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 158 iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
.|++.|.+ ++ +..|-++.|+.
T Consensus 100 ~H~~~~~~-~~-~~~l~~~~p~~ 120 (134)
T 2o8q_A 100 RHRELRHS-DD-LEVLEIVSPAG 120 (134)
T ss_dssp CEEEEEEC-TT-CEEEEEESSTT
T ss_pred cEEeEeCC-CC-eEEEEEECCCc
Confidence 99999986 33 46666776654
No 59
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=97.40 E-value=0.0014 Score=48.71 Aligned_cols=86 Identities=17% Similarity=0.204 Sum_probs=66.0
Q ss_pred ceEEeeec-CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE
Q psy5204 71 YTRNLVDE-GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 71 Y~R~ll~~-~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v 149 (209)
|...++.. ....+++.++...||...+.|. ...-++.||+|+++.+. ++ ....+++||+
T Consensus 27 ~~g~v~s~~~~~~~~~~~~~~~pG~~~~~H~--~~~E~~~Vl~G~~~~~~-----~g-------------~~~~l~~GD~ 86 (119)
T 3lwc_A 27 SVGNLVDERHGGPITIGYGRYAPGQSLTETM--AVDDVMIVLEGRLSVST-----DG-------------ETVTAGPGEI 86 (119)
T ss_dssp EEEEC------CCCEEEEEEECTTCEEEEEC--SSEEEEEEEEEEEEEEE-----TT-------------EEEEECTTCE
T ss_pred EEEEeecCCCCCCEEEEEEEECCCCCcCccC--CCCEEEEEEeCEEEEEE-----CC-------------EEEEECCCCE
Confidence 66677653 4678999999999999998886 34678899999999875 11 3677999999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
+++.+ +..|++.|.+ +++.-|-|..|+
T Consensus 87 v~ip~-g~~H~~~~~~--~~~~~l~v~~P~ 113 (119)
T 3lwc_A 87 VYMPK-GETVTIRSHE--EGALTAYVTYPH 113 (119)
T ss_dssp EEECT-TCEEEEEEEE--EEEEEEEEEECC
T ss_pred EEECC-CCEEEEEcCC--CCeEEEEEECCC
Confidence 99976 4589999874 678888888887
No 60
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.39 E-value=0.00079 Score=57.60 Aligned_cols=79 Identities=22% Similarity=0.205 Sum_probs=63.9
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
++.|+++.+...||...+.|-|....-++.|++|+++.+. ++ ....+++||+.++++ +..|
T Consensus 43 ~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~-----~~-------------~~~~l~~Gd~~~~p~-~~~H 103 (337)
T 1y3t_A 43 GDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL-----DG-------------ERYLLISGDYANIPA-GTPH 103 (337)
T ss_dssp TSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE-----TT-------------EEEEECTTCEEEECT-TCCE
T ss_pred CCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE-----CC-------------EEEEECCCCEEEECC-CCcE
Confidence 5789999999999999999999855778999999998764 11 357899999999876 5699
Q ss_pred EEecCCCCCceEEEEEeCCC
Q psy5204 160 KVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 160 ~v~n~~~~~~avSLHvY~pp 179 (209)
.+.|.+ + ++.-|=++.|+
T Consensus 104 ~~~n~~-~-~~~~~~~~~p~ 121 (337)
T 1y3t_A 104 SYRMQS-H-RTRLVSYTMKG 121 (337)
T ss_dssp EEEECS-T-TEEEEEEEETT
T ss_pred EEEECC-C-CeEEEEEECCC
Confidence 999997 4 56666565554
No 61
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=97.37 E-value=0.00074 Score=57.36 Aligned_cols=85 Identities=13% Similarity=0.200 Sum_probs=63.5
Q ss_pred eEEeee-cCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEE
Q psy5204 72 TRNLVD-EGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVC 150 (209)
Q Consensus 72 ~R~ll~-~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~ 150 (209)
.+.|+. ..+..|+++++...||..|+.|.|+ +.-++.||+|+++.+. +++ .+..+++|+..
T Consensus 58 ~~vL~sP~~G~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l----~~g-------------~~~~L~~Gds~ 119 (266)
T 4e2q_A 58 GAYLITPATGSHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTN----TSS-------------SSKKLTVDSYA 119 (266)
T ss_dssp EEEEECGGGTCSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC------C-------------CCEEECTTEEE
T ss_pred EEEEcCCCCCCcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEE----CCC-------------cEEEEcCCCEE
Confidence 344443 2257999999999999999999998 4788999999999774 101 25789999999
Q ss_pred EEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 151 YINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 151 ~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
++.+ +.-|+++|.+ + ..++++...
T Consensus 120 y~p~-~~~H~~~N~~---~-Ar~l~V~k~ 143 (266)
T 4e2q_A 120 YLPP-NFHHSLDCVE---S-ATLVVFERR 143 (266)
T ss_dssp EECT-TCCCEEEESS---C-EEEEEEEEE
T ss_pred EECC-CCCEEEEeCC---C-EEEEEEEeE
Confidence 9986 5699999953 3 445555333
No 62
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.35 E-value=0.00093 Score=52.38 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=64.8
Q ss_pred cchhhhhccCCccceEEeeec-CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccc
Q psy5204 58 DDWKRYAQFDENRYTRNLVDE-GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPL 136 (209)
Q Consensus 58 ~~w~~~~~~~~~~Y~R~ll~~-~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l 136 (209)
..|.++...- ....+..|+. +.+...+.++.|+||...|.|.|.+ .-.+.||+|+++- . +.
T Consensus 17 ~~W~~~~~~~-~Gv~~~~L~~d~~~g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~---~--e~----------- 78 (159)
T 3ebr_A 17 TPWMPFAPYS-NDVMVKYFKIDPVRGETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRY---K--EH----------- 78 (159)
T ss_dssp SCCEECTTTC-SSSEEEEEEEETTTTEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEE---T--TS-----------
T ss_pred CCcEeCCCCC-CCEEEEEeeEcCCCCeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEE---e--CC-----------
Confidence 3455433222 3455666653 3356788889999999999999987 4567899999872 1 11
Q ss_pred cccceEEeeCCcEEEEcCCCCeEEEecC--CCCCceEEEE-EeCC
Q psy5204 137 SEISRTELAENDVCYINDSMGLHKVGNS--GPHPAAVSLH-LYSP 178 (209)
Q Consensus 137 ~~~~~~~~~~G~v~~~~~~~~iH~v~n~--~~~~~avSLH-vY~p 178 (209)
...+.+|+..+.++ +..|...+. + ++.++.+= ..||
T Consensus 79 ----~~~~~~Gd~~~~P~-g~~H~~~~~~~~-~e~~~~~~~~~G~ 117 (159)
T 3ebr_A 79 ----DWVAHAGSVVYETA-STRHTPQSAYAE-GPDIITFNIVAGE 117 (159)
T ss_dssp ----SCCBCTTCEEEECS-SEEECEEESSSS-SSCEEEEEEEESC
T ss_pred ----CeEECCCeEEEECC-CCcceeEeCCCC-CCCEEEEEEecCc
Confidence 12477999877665 569999887 5 46676555 4544
No 63
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.27 E-value=0.00081 Score=56.70 Aligned_cols=74 Identities=9% Similarity=0.092 Sum_probs=57.7
Q ss_pred CCceEEEEEEccCCCccCCCCC-CCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCe
Q psy5204 80 DGKFNLILLCWSQGQASSIHDH-AQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGL 158 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH-~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~i 158 (209)
+..|+++++...||..+..|-| .+..-++.||+|+++.+. ++ .+..+++||..++++ ..-
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~-----~~-------------~~~~L~~GD~~~~~~-~~~ 119 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD-----GQ-------------ETHELEAGGYAYFTP-EMK 119 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC-----SS-------------CEEEEETTEEEEECT-TSC
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE-----CC-------------EEEEECCCCEEEECC-CCC
Confidence 5789999999999998876554 345678999999998764 11 367899999999976 468
Q ss_pred EEEecCCCCCceEEE
Q psy5204 159 HKVGNSGPHPAAVSL 173 (209)
Q Consensus 159 H~v~n~~~~~~avSL 173 (209)
|++.|.+ ++++.-|
T Consensus 120 H~~~N~~-~~~~~~l 133 (274)
T 1sef_A 120 MYLANAQ-EADTEVF 133 (274)
T ss_dssp CEEEESS-SSCEEEE
T ss_pred EEEEeCC-CCCEEEE
Confidence 9999998 4665444
No 64
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=97.27 E-value=0.0011 Score=52.07 Aligned_cols=90 Identities=16% Similarity=0.156 Sum_probs=68.8
Q ss_pred CCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEE--eEEEEEEeeCCCCCCCCCCCCccccccceEEe
Q psy5204 67 DENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQ--GCLTEVRYQEPNHTSDEIGQDRPLSEISRTEL 144 (209)
Q Consensus 67 ~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~--G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~ 144 (209)
.+.++.|.++.. +..|.+.+..+.+|..++.|-|....=++.||+ |+.+... ++ ....+
T Consensus 30 ~~~G~srR~l~~-~~~fp~sv~~v~~g~~~~~H~H~~~~E~~yVLe~~G~g~v~i-----dg-------------e~~~l 90 (157)
T 4h7l_A 30 CPCGWAQRAFGH-DAGTSVSVHYTQITKAARTHYHREHQEIYVVLDHAAHATIEL-----NG-------------QSYPL 90 (157)
T ss_dssp ETTEEEEEESCG-GGCCSCEEEEEEECSCCCCBBCSSCEEEEEEEEECTTCEEEE-----TT-------------EEEEC
T ss_pred CCCCeeeEEeEc-CCCCcEEEEEEeCCCCccceECCCCcEEEEEEecCcEEEEEE-----CC-------------EEEEe
Confidence 445688988875 345555555677788899999986667899999 9988765 11 35779
Q ss_pred eCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 145 AENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 145 ~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
++|+++++++ +..|++.+ ...-|=|..||+.
T Consensus 91 ~~GD~v~IPp-g~~H~i~g-----~l~~L~I~~Pp~~ 121 (157)
T 4h7l_A 91 TKLLAISIPP-LVRHRIVG-----EATIINIVSPPFD 121 (157)
T ss_dssp CTTEEEEECT-TCCEEEES-----CEEEEEEEESSCC
T ss_pred CCCCEEEECC-CCeEeeEC-----CEEEEEEECCCCC
Confidence 9999999886 56999972 5788889999986
No 65
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.25 E-value=0.003 Score=53.16 Aligned_cols=88 Identities=10% Similarity=0.027 Sum_probs=64.5
Q ss_pred ccceEEeee-c-CCCceEEEEEEccCCCccCC-CCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEee
Q psy5204 69 NRYTRNLVD-E-GDGKFNLILLCWSQGQASSI-HDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELA 145 (209)
Q Consensus 69 ~~Y~R~ll~-~-~~~~~~l~~~~W~pG~~spi-HDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~ 145 (209)
..+.+..|. . ....+++..+...||...+. |-|.. .-++.||+|+.+... ++ ....++
T Consensus 166 ~g~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~H~H~~-~E~~yVl~G~~~~~i-----~~-------------~~~~l~ 226 (274)
T 1sef_A 166 TDVLLWSLLPKEFDFDMNMHILSFEPGASHAYIETHVQ-EHGAYLISGQGMYNL-----DN-------------EWYPVE 226 (274)
T ss_dssp TTEEEEECSCSSTTCSEEEEEEEECTTCBCSSCBCCSC-CEEEEEEECEEEEEE-----TT-------------EEEEEE
T ss_pred CCeEEEEeCCcccCCCEEEEEEEECCCCccCcceeccC-eEEEEEEeCEEEEEE-----CC-------------EEEEEC
Confidence 344444443 2 34689999999999999999 99985 456789999998765 11 367899
Q ss_pred CCcEEEEcCCCCeEEEecCCCCCceEEEEEeC
Q psy5204 146 ENDVCYINDSMGLHKVGNSGPHPAAVSLHLYS 177 (209)
Q Consensus 146 ~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~ 177 (209)
+||+.++++ +..|.+.|.++.+++ .+-+|.
T Consensus 227 ~GD~i~i~~-~~~H~~~n~~~~~~~-~~l~~~ 256 (274)
T 1sef_A 227 KGDYIFMSA-YVPQAAYAVGREEPL-MYVYSK 256 (274)
T ss_dssp TTCEEEECT-TCCEEEEEECSSSCE-EEEEEE
T ss_pred CCCEEEECC-CCCEEEEeCCCCCCE-EEEEEE
Confidence 999999986 569999999731444 444663
No 66
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=97.20 E-value=0.0027 Score=48.02 Aligned_cols=77 Identities=8% Similarity=0.143 Sum_probs=57.8
Q ss_pred cCCCccCCC---C-CCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCC
Q psy5204 91 SQGQASSIH---D-HAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGP 166 (209)
Q Consensus 91 ~pG~~spiH---D-H~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~ 166 (209)
.|+..-+.| + |.|.|+.+.||+|+++...|.- ++.. .........+|+...+.| ...|+|+..+
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e--~g~~--------~~~~~~l~~~~~~~~i~P-q~wH~Ve~ls- 89 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYAD--EHSA--------EPDQVILIEAGQFAVFPP-EKWHNIEAMT- 89 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESS--TTCS--------SCSEEEEEEBTBEEECCS-SCEEEEEESS-
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECC--CCCc--------ceeEEEEeCCCCceEECC-CCcEEEEEcC-
Confidence 467778889 6 9999999999999999988743 3320 111355667888766665 6799999887
Q ss_pred CCceEEEEEeCCC
Q psy5204 167 HPAAVSLHLYSPP 179 (209)
Q Consensus 167 ~~~avSLHvY~pp 179 (209)
++...-|.+|..|
T Consensus 90 dd~~f~leFyc~~ 102 (127)
T 3bb6_A 90 DDTYFNIDFFVAP 102 (127)
T ss_dssp TTCEEEEEEEECH
T ss_pred CCEEEEEEEEeCC
Confidence 4677789999877
No 67
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=97.09 E-value=0.0017 Score=59.93 Aligned_cols=83 Identities=11% Similarity=-0.004 Sum_probs=64.8
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+++..+...||...++|-|+++.-++.|++|+.+...... ++. ..-...+.+||+.+++. ..+|.+
T Consensus 371 ~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~--~G~----------~~~~~~l~~GDv~viP~-G~~H~~ 437 (510)
T 3c3v_A 371 GLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDS--NGN----------RVYDEELQEGHVLVVPQ-NFAVAG 437 (510)
T ss_dssp TCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECT--TSC----------EEEEEEEETTCEEEECT-TCEEEE
T ss_pred eEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeC--CCC----------EEEeEEEcCCcEEEECC-CCeEEE
Confidence 68899999999999999999988899999999999887531 111 11245699999999875 569999
Q ss_pred ecCCCCCceEEEEEeCCC
Q psy5204 162 GNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 162 ~n~~~~~~avSLHvY~pp 179 (209)
.| + ++...-+=++.++
T Consensus 438 ~N-g-~e~l~~l~f~~s~ 453 (510)
T 3c3v_A 438 KS-Q-SDNFEYVAFKTDS 453 (510)
T ss_dssp EE-C-SSEEEEEEEESSS
T ss_pred Ee-C-CCCEEEEEEECCC
Confidence 99 6 4666666676444
No 68
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=97.07 E-value=0.0057 Score=53.44 Aligned_cols=84 Identities=11% Similarity=-0.026 Sum_probs=60.7
Q ss_pred CCceEEEEEEccCCCcc-C--CCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCC
Q psy5204 80 DGKFNLILLCWSQGQAS-S--IHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSM 156 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~s-p--iHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~ 156 (209)
++.|+++ ....||..+ + .|-|....-++.||+|+++...=.. ++. .....+.+||+.++++ .
T Consensus 45 ~~~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~--~g~-----------~~~~~L~~GD~v~ip~-g 109 (350)
T 1juh_A 45 GYAFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSG--NET-----------QQTRVLSSGDYGSVPR-N 109 (350)
T ss_dssp TTSCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEET--TSC-----------CEEEEEETTCEEEECT-T
T ss_pred CCcEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCc--CCc-----------eEEEEECCCCEEEECC-C
Confidence 5789998 555555554 4 8999866778899999998765211 111 1367899999999876 5
Q ss_pred CeEEEecCCCCCceEEEEEeCCCC
Q psy5204 157 GLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 157 ~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
..|++.|.+ +++ .-|-++.|+.
T Consensus 110 ~~H~~~n~~-~~~-~~l~v~~p~~ 131 (350)
T 1juh_A 110 VTHTFQIQD-PDT-EMTGVIVPGG 131 (350)
T ss_dssp EEEEEEECS-TTE-EEEEEEESSC
T ss_pred CcEEEEeCC-CCC-EEEEEEcCcc
Confidence 699999997 455 6677777764
No 69
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=97.05 E-value=0.0018 Score=59.17 Aligned_cols=83 Identities=10% Similarity=-0.003 Sum_probs=64.6
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+++..+...||...++|-|+++.-++.|++|+.+...... ++. ..-...+.+||+.+++. +..|.+
T Consensus 337 ~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~--~G~----------~~~~~~l~~GDv~viP~-G~~H~~ 403 (476)
T 1fxz_A 337 RLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNC--NGE----------RVFDGELQEGRVLIVPQ-NFVVAA 403 (476)
T ss_dssp TCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECT--TSC----------EEEEEEEETTCEEEECT-TCEEEE
T ss_pred cceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEec--CCC----------EEeeeEEcCCCEEEECC-CCeEEE
Confidence 78999999999999999999988889999999999887531 111 11245699999999875 569999
Q ss_pred ecCCCCCceEEEEEeCCC
Q psy5204 162 GNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 162 ~n~~~~~~avSLHvY~pp 179 (209)
.| + ++...-+=++..+
T Consensus 404 ~n-g-~~~l~~l~f~~s~ 419 (476)
T 1fxz_A 404 RS-Q-SDNFEYVSFKTND 419 (476)
T ss_dssp EE-C-STTEEEEEEESSS
T ss_pred Ee-C-CCCEEEEEEECCC
Confidence 99 6 4666666666344
No 70
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=97.01 E-value=0.0055 Score=51.88 Aligned_cols=78 Identities=12% Similarity=0.167 Sum_probs=59.1
Q ss_pred CCceEEEEEEccCCCccCC-CCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCe
Q psy5204 80 DGKFNLILLCWSQGQASSI-HDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGL 158 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spi-HDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~i 158 (209)
...|++..+..+||...+. |-|. ..=.+.||+|+..... ++ ....+++||+.++.+ ..-
T Consensus 188 ~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~-----~~-------------~~~~v~~GD~~~~~~-~~~ 247 (278)
T 1sq4_A 188 RHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRL-----NQ-------------DWVEVEAGDFMWLRA-FCP 247 (278)
T ss_dssp TCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEE-----TT-------------EEEEEETTCEEEEEE-SCC
T ss_pred CCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEE-----CC-------------EEEEeCCCCEEEECC-CCC
Confidence 4789999999999999997 5555 4345899999998664 11 367899999999876 579
Q ss_pred EEEecCCCCCceEEEEEeCCC
Q psy5204 159 HKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 159 H~v~n~~~~~~avSLHvY~pp 179 (209)
|.+.|.+ +++ +..-+|-.-
T Consensus 248 h~~~n~g-~~~-~~yl~~~d~ 266 (278)
T 1sq4_A 248 QACYSGG-PGR-FRYLLYKDV 266 (278)
T ss_dssp EEEECCS-SSC-EEEEEEEEC
T ss_pred EEEEcCC-CCC-EEEEEEEEc
Confidence 9999998 444 444455433
No 71
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.01 E-value=0.0053 Score=52.38 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=60.2
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
..+.+++..-++|...+.|-|.++.-++.|++|+++... ++ ....+++||+.++++ ...|+
T Consensus 216 ~~~~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i-----~~-------------~~~~l~~GD~~~ip~-~~~H~ 276 (337)
T 1y3t_A 216 GQFIVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT-----DG-------------QEIQLNPGDFLHVPA-NTVHS 276 (337)
T ss_dssp TSCEEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE-----TT-------------EEEEECTTCEEEECT-TCCEE
T ss_pred CcEEEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE-----CC-------------EEEEECCCCEEEECC-CCeEE
Confidence 445444444456888999999855788999999998765 11 367899999999876 56999
Q ss_pred EecCCCCCceEEEEEeCCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp~ 180 (209)
+.|.+ + ++.-|-++.|+.
T Consensus 277 ~~n~~-~-~~~~l~v~~~~~ 294 (337)
T 1y3t_A 277 YRLDS-H-YTKMVGVLVPGL 294 (337)
T ss_dssp EEECS-S-SEEEEEEEESST
T ss_pred EEECC-C-CeEEEEEEcCcc
Confidence 99997 4 777788887775
No 72
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=97.00 E-value=0.00096 Score=58.62 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=64.9
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
..+.+..+...||..++.|-|.. .-++.|++|+...+.. ++ ....+++||+.++++ ...|.
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~-~e~~yVl~G~g~~t~v----~g-------------~~~~l~~GD~~~iP~-g~~H~ 158 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQ-SALRFIVEGKGAFTAV----DG-------------ERTPMNEGDFILTPQ-WRWHD 158 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEEEEECSSCEEEE----TT-------------EEEECCTTCEEEECT-TSCEE
T ss_pred CcEEEEEEEECCCCCcCCeecCc-ceEEEEEEEEEEEEEE----CC-------------EEEEEcCCCEEEECC-CCcEE
Confidence 35789999999999999999985 5889999998765332 11 367899999998865 56999
Q ss_pred EecCCCCCceEEEEEeCCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp~ 180 (209)
+.|.+ +++++-|-+..+|+
T Consensus 159 ~~n~~-~~~~~~l~v~d~p~ 177 (354)
T 2d40_A 159 HGNPG-DEPVIWLDGLDLPL 177 (354)
T ss_dssp EECCS-SSCEEEEEEECHHH
T ss_pred eEeCC-CCCEEEEEEECchh
Confidence 99998 68899999887774
No 73
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=96.97 E-value=0.0046 Score=47.35 Aligned_cols=99 Identities=10% Similarity=0.018 Sum_probs=65.8
Q ss_pred ceEEeeec-CCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE
Q psy5204 71 YTRNLVDE-GDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 71 Y~R~ll~~-~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v 149 (209)
-.+..|+. +...-.+.++.|+||...|.|.|.+. -.+.||+|+++.. .+. .. ....+++|+.
T Consensus 31 v~~~~L~~~~~~g~~~~~~~~~pG~~~p~H~H~~~-ee~~VL~G~~~~~------~g~--------~~--~~~~~~~Gd~ 93 (145)
T 2o1q_A 31 IRWKLLHVSPEMGSWTAIFDCPAGSSFAAHVHVGP-GEYFLTKGKMDVR------GGK--------AA--GGDTAIAPGY 93 (145)
T ss_dssp CEEEEEEEETTTTEEEEEEEECTTEEECCEEESSC-EEEEEEEEEEEET------TCG--------GG--TSEEEESSEE
T ss_pred cEEEEeeECCCcccEEEEEEECCCCCCCccCCCCC-EEEEEEEeEEEEc------CCC--------Ee--cceEeCCCEE
Confidence 34455543 22223577889999999999999864 4589999999832 111 11 2478999998
Q ss_pred EEEcCCCCeEE-EecCCCCCceEEEEEeCCCCCcceEEECCCCceE
Q psy5204 150 CYINDSMGLHK-VGNSGPHPAAVSLHLYSPPFNICSSFDAQTGVKS 194 (209)
Q Consensus 150 ~~~~~~~~iH~-v~n~~~~~~avSLHvY~pp~~~~~~yd~~~g~~~ 194 (209)
.+.++ +..|. ..+. +.++-|-++.+|+ ..+++ .|...
T Consensus 94 ~~~p~-g~~H~p~~~~---e~~~~l~~~~gp~---~f~~~-~g~~~ 131 (145)
T 2o1q_A 94 GYESA-NARHDKTEFP---VASEFYMSFLGPL---TFVKP-DGSPI 131 (145)
T ss_dssp EEECT-TCEESCCEEE---EEEEEEEEEESCE---EEECT-TSCEE
T ss_pred EEECc-CCccCCeECC---CCeEEEEEECCcc---eecCC-CCCEe
Confidence 88765 66999 5444 3577788888886 33443 35544
No 74
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=96.83 E-value=0.0024 Score=56.55 Aligned_cols=81 Identities=12% Similarity=0.124 Sum_probs=64.8
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
+.+.+.+....||..++.|-|.. ..+..|++|+-....- ++ .+..+++||++++.+ ...|.
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~-~ev~~VleG~G~~~~v----dG-------------~~~~~~~GD~v~iP~-g~~H~ 161 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQ-NAFRFVVEGEGVWTVV----NG-------------DPVRMSRGDLLLTPG-WCFHG 161 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEECSSCEEEEEEE----TT-------------EEEEEETTCEEEECT-TCCEE
T ss_pred CceEEEEEEECCCCccCceeccc-ceEEEEEecceEEEEE----CC-------------EEEEEeCCCEEEECC-CCcEE
Confidence 57889999999999999999995 5889999998632221 11 367899999988754 67999
Q ss_pred EecCCCCCceEEEEEeCCCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp~~ 181 (209)
+.|.+ +++++-|-+.--|+-
T Consensus 162 ~~N~g-de~l~~l~v~D~Pl~ 181 (368)
T 3nw4_A 162 HMNDT-DQPMAWIDGLDIPFS 181 (368)
T ss_dssp EEECS-SSCEEEEEEECHHHH
T ss_pred eEeCC-CCCeEEEEecchHHH
Confidence 99998 689999887766654
No 75
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=96.82 E-value=0.005 Score=46.56 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=63.9
Q ss_pred hhccCCcc--ceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccc
Q psy5204 63 YAQFDENR--YTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEIS 140 (209)
Q Consensus 63 ~~~~~~~~--Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~ 140 (209)
+...+|.. +.+.+.......+++.++.|.|| ..+.|-| ..-++.||+|+++.+. ++ .
T Consensus 35 ~~~g~p~~~~~~~~L~~~~~~~~~~~~~~~~pG-~~~~h~~--~~E~~~VLeG~~~l~~-----~g-------------~ 93 (133)
T 2pyt_A 35 FDGAEPHCVGLTDLVTEQDGSSMAAGFMQWDNA-FFPWTLN--YDEIDMVLEGELHVRH-----EG-------------E 93 (133)
T ss_dssp CGGGTTSCCEEEEEECGGGTCSSEEEEEEEEEE-EEEEECS--SEEEEEEEEEEEEEEE-----TT-------------E
T ss_pred ccCCCCCceEEEEEEecCCCCcEEEEEEEECCC-CccccCC--CCEEEEEEECEEEEEE-----CC-------------E
Confidence 34445543 55555544345899999999999 3444433 3667889999999775 11 3
Q ss_pred eEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 141 RTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 141 ~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
...+++||+.++++ +..|+..|. +++.-|-|..|+
T Consensus 94 ~~~l~~GD~i~~p~-g~~h~~~~~---~~~~~l~v~~p~ 128 (133)
T 2pyt_A 94 TMIAKAGDVMFIPK-GSSIEFGTP---TSVRFLYVAWPA 128 (133)
T ss_dssp EEEEETTCEEEECT-TCEEEEEEE---EEEEEEEEEEST
T ss_pred EEEECCCcEEEECC-CCEEEEEeC---CCEEEEEEEcCC
Confidence 56899999999976 457999874 466666666665
No 76
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=96.72 E-value=0.0037 Score=57.35 Aligned_cols=83 Identities=7% Similarity=-0.044 Sum_probs=64.2
Q ss_pred eEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEe
Q psy5204 83 FNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVG 162 (209)
Q Consensus 83 ~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~ 162 (209)
+++..+...||...++|-|+++.-++.|++|+.+...... .+. ..-...+.+||+.++++ ..+|.+.
T Consensus 367 ls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~--~g~----------~~~~~~l~~GDv~vvP~-G~~H~~~ 433 (493)
T 2d5f_A 367 LSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNA--QGN----------AVFDGELRRGQLLVVPQ-NFVVAEQ 433 (493)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECT--TSC----------EEEEEEEETTCEEEECT-TCEEEEE
T ss_pred eEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcC--CCC----------EEEeEEEcCCCEEEECC-CCeEeee
Confidence 8899999999999999999988889999999999887532 111 11235699999998875 5699998
Q ss_pred cCCCCCceEEEEEeCCCC
Q psy5204 163 NSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 163 n~~~~~~avSLHvY~pp~ 180 (209)
|.+ +++.-|=++..+.
T Consensus 434 n~~--e~~~~l~~~ts~~ 449 (493)
T 2d5f_A 434 GGE--QGLEYVVFKTHHN 449 (493)
T ss_dssp EEE--EEEEEEEEESSTT
T ss_pred eCC--CCEEEEEEECCCC
Confidence 853 6777777774443
No 77
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=96.60 E-value=0.0059 Score=53.49 Aligned_cols=83 Identities=14% Similarity=0.134 Sum_probs=64.9
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
..+.+..+...||...+.|-|. ..-++.|++|+.+.+.... ++. . ....+++||+.++++ +..|.
T Consensus 77 ~~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~--~g~--------~---~~~~l~~GD~~~ip~-g~~H~ 141 (385)
T 1j58_A 77 ENLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDE--KGR--------S---FIDDVGEGDLWYFPS-GLPHS 141 (385)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECT--TSC--------E---EEEEEETTEEEEECT-TCCEE
T ss_pred CceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeC--CCc--------E---EEEEeCCCCEEEECC-CCeEE
Confidence 5789999999999999999999 5789999999998877421 111 0 134799999988875 56999
Q ss_pred EecCCCCCceEEEEEeCCCC
Q psy5204 161 VGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 161 v~n~~~~~~avSLHvY~pp~ 180 (209)
+.|.+ +++.-|-++.++.
T Consensus 142 ~~n~~--~~~~~~~v~~~~~ 159 (385)
T 1j58_A 142 IQALE--EGAEFLLVFDDGS 159 (385)
T ss_dssp EEEEE--EEEEEEEEESCTT
T ss_pred EEECC--CCEEEEEEECCCC
Confidence 99986 3577777777664
No 78
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=96.59 E-value=0.027 Score=47.62 Aligned_cols=81 Identities=15% Similarity=0.115 Sum_probs=60.3
Q ss_pred ceEEeeec-CCCceEEEEEEccCCCccCC-CCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCc
Q psy5204 71 YTRNLVDE-GDGKFNLILLCWSQGQASSI-HDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEND 148 (209)
Q Consensus 71 Y~R~ll~~-~~~~~~l~~~~W~pG~~spi-HDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~ 148 (209)
..|.++-+ ....+.+-++...||...|. |-|.... .+.||+|+-.... ++ ....+++||
T Consensus 173 ~~r~l~p~~~~~d~~~~~~t~~PG~~~p~~e~H~~eh-~~~vL~G~g~y~l-----~~-------------~~~~V~~GD 233 (266)
T 4e2q_A 173 ELRKLLPMSVAYDFNIHTMDFQPGEFLNVKEVHYNQH-GLLLLEGQGIYRL-----GD-------------NWYPVQAGD 233 (266)
T ss_dssp EEEESSCCSTTCSEEEEEEEECTTCBCSSCCCCSCCE-EEEEEECEEEEEE-----TT-------------EEEEEETTC
T ss_pred EEEEccCcccccceEEEEEEECCCcCcCCceEcccce-EEEEEeceEEEEE-----CC-------------EEEEecCCC
Confidence 46656543 24677788999999999996 6666434 4899999977653 11 367799999
Q ss_pred EEEEcCCCCeEEEecCCCCCceEE
Q psy5204 149 VCYINDSMGLHKVGNSGPHPAAVS 172 (209)
Q Consensus 149 v~~~~~~~~iH~v~n~~~~~~avS 172 (209)
++++.+ ..-|.+.|.+ +++..-
T Consensus 234 ~i~~~~-~~~h~~~n~G-~e~~~y 255 (266)
T 4e2q_A 234 VIWMAP-FVPQWYAALG-KTRSRY 255 (266)
T ss_dssp EEEECT-TCCEEEEEES-SSCEEE
T ss_pred EEEECC-CCcEEEEeCC-CCCEEE
Confidence 999987 5799999998 466543
No 79
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=96.49 E-value=0.0098 Score=53.09 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=61.2
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
...+.+.+...+||+.++.|-|..+ .+..||+|+-..+.- ++ .+..+++||++.+.+ ...|
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~~-ev~~IleG~G~~t~v----~G-------------~~~~~~~GD~i~~P~-g~~H 180 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAAS-ALRFIMEGSGAYTIV----DG-------------HKVELGANDFVLTPN-GTWH 180 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESSC-EEEEEEECSCEEEEE----TT-------------EEEEECTTCEEEECT-TCCE
T ss_pred CCeeEEEEEEECCCCCcCCccCCcc-eEEEEEEeeEEEEEE----CC-------------EEEEEcCCCEEEECc-CCCE
Confidence 4678889999999999999999975 789999997543221 11 367899999888765 6799
Q ss_pred EEec-CCCCCceEEEEEe
Q psy5204 160 KVGN-SGPHPAAVSLHLY 176 (209)
Q Consensus 160 ~v~n-~~~~~~avSLHvY 176 (209)
.+.| .+ +++.+-|-+-
T Consensus 181 ~~~N~~g-de~l~~l~v~ 197 (394)
T 3bu7_A 181 EHGILES-GTECIWQDGL 197 (394)
T ss_dssp EEEECTT-CCCEEEEEEE
T ss_pred EEEcCCC-CCCEEEEEcc
Confidence 9999 87 6899888644
No 80
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=96.47 E-value=0.027 Score=42.07 Aligned_cols=73 Identities=8% Similarity=0.131 Sum_probs=49.0
Q ss_pred CCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 102 AQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 102 ~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
.|.||.+.||+|+++-..|.- ++.. .........+|+...+.| ...|+|+ .+ ++.-.-|..|..|-.
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e--~~~~--------~~~~~~~~~~~~~~~i~P-q~wHrVe-~s-dD~~f~leFyc~~~d 102 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFAN--SEAT--------EPEIKVVINAGQFATSPP-QYWHRIE-LS-DDAQFNINFWSDQDK 102 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESS--TTCC--------SCSEEEEEETTEEEEECT-TCEEEEE-EC-TTCEEEEEEEECC--
T ss_pred CcEEEEEEEEEeEEEEEEEcC--CCCC--------cccEEEEeCCCCCceeCC-CceEEEE-EC-CCeEEEEEEEECchH
Confidence 357999999999998777742 2221 111456778999877776 6799999 76 578889999998865
Q ss_pred cc-eEEE
Q psy5204 182 IC-SSFD 187 (209)
Q Consensus 182 ~~-~~yd 187 (209)
.+ ..|+
T Consensus 103 yf~k~~~ 109 (119)
T 3dl3_A 103 SGKKMFN 109 (119)
T ss_dssp -------
T ss_pred Hhhhhhc
Confidence 43 4454
No 81
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=96.43 E-value=0.01 Score=53.96 Aligned_cols=83 Identities=10% Similarity=-0.008 Sum_probs=66.2
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+++..+...||...++|-|+.+.-|+.|++|+.+.....- .+ . ..-...|.+||+.+|+. .-+|.+
T Consensus 321 ~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~--~g-~---------~~~~~~l~~GDv~v~P~-G~~H~~ 387 (459)
T 2e9q_A 321 RLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDN--FG-Q---------SVFDGEVREGQVLMIPQ-NFVVIK 387 (459)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECT--TS-C---------EEEEEEEETTCEEEECT-TCEEEE
T ss_pred ccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeC--CC-C---------EEEeeEEeCCcEEEECC-CCEEEE
Confidence 78999999999999999999999999999999999998642 11 1 11245699999999875 569999
Q ss_pred ecCCCCCceEEEEEeCCC
Q psy5204 162 GNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 162 ~n~~~~~~avSLHvY~pp 179 (209)
.| + ++++.-|=++..+
T Consensus 388 ~n-g-~~~~~~l~~~~s~ 403 (459)
T 2e9q_A 388 RA-S-DRGFEWIAFKTND 403 (459)
T ss_dssp EE-E-EEEEEEEEEESSS
T ss_pred Ee-C-CCCeEEEEEecCC
Confidence 99 5 4677777777655
No 82
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=96.29 E-value=0.013 Score=40.73 Aligned_cols=63 Identities=16% Similarity=0.161 Sum_probs=46.3
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+.+.+..+. ...+.|-|....-++.|++|+++... + + ....+.+|+++++++ +..|++
T Consensus 30 ~~~~~~~~~~--~~~~~H~H~~~~e~~~v~~G~~~~~~----~-~-------------~~~~l~~Gd~~~ip~-~~~H~~ 88 (102)
T 3d82_A 30 DYQFKLVKVE--GEFVWHEHADTDEVFIVMEGTLQIAF----R-D-------------QNITLQAGEMYVIPK-GVEHKP 88 (102)
T ss_dssp TEEEEEEEEE--EECCCBCCTTCCEEEEEEESEEEEEC----S-S-------------CEEEEETTEEEEECT-TCCBEE
T ss_pred CCEEEEEEEC--CCCCceeCCCCcEEEEEEeCEEEEEE----C-C-------------EEEEEcCCCEEEECC-CCeEee
Confidence 3444444443 35899999865678999999988653 1 1 267799999998876 569999
Q ss_pred ecCC
Q psy5204 162 GNSG 165 (209)
Q Consensus 162 ~n~~ 165 (209)
.|.+
T Consensus 89 ~~~~ 92 (102)
T 3d82_A 89 MAKE 92 (102)
T ss_dssp EEEE
T ss_pred EcCC
Confidence 9874
No 83
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=96.24 E-value=0.016 Score=52.88 Aligned_cols=83 Identities=6% Similarity=-0.037 Sum_probs=65.6
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+++..+...||...++|-|+.++-|+.|++|+.+.....- .+ ...-...|.+|||.+|+. .-+|.+
T Consensus 322 giS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~--~g----------~~~f~~~l~~GDV~v~P~-G~~H~~ 388 (466)
T 3kgl_A 322 RLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVND--NG----------DRVFDGQVSQGQLLSIPQ-GFSVVK 388 (466)
T ss_dssp TCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECT--TS----------CEEEEEEEETTCEEEECT-TCEEEE
T ss_pred ceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeC--CC----------cEEEEeEecCCcEEEECC-CCeEEE
Confidence 68899999999999999999999999999999999998742 11 112356799999988864 569987
Q ss_pred ecCCCCCceEEEEEeCCC
Q psy5204 162 GNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 162 ~n~~~~~~avSLHvY~pp 179 (209)
|++ ++++.-|=++..+
T Consensus 389 -~ag-~e~~~~l~~f~s~ 404 (466)
T 3kgl_A 389 -RAT-SEQFRWIEFKTNA 404 (466)
T ss_dssp -EEC-SSEEEEEEEESSS
T ss_pred -EcC-CCCEEEEEEECCC
Confidence 676 5677777666555
No 84
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=96.22 E-value=0.03 Score=46.31 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=52.1
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
...|+++++...||..++.|- ..-++.||+|+++.+. ++ ....+++||..++++ ...|
T Consensus 47 ~~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~-----~~-------------~~~~l~~Gd~~~~p~-~~~H 104 (246)
T 1sfn_A 47 GARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAV-----GG-------------ETRTLREYDYVYLPA-GEKH 104 (246)
T ss_dssp CCSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEEC-----SS-------------CEEEECTTEEEEECT-TCCC
T ss_pred CCcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEE-----CC-------------EEEEECCCCEEEECC-CCCE
Confidence 478999999999999998874 4678899999998764 11 367899999999986 5689
Q ss_pred EEecC
Q psy5204 160 KVGNS 164 (209)
Q Consensus 160 ~v~n~ 164 (209)
++.|.
T Consensus 105 ~~~n~ 109 (246)
T 1sfn_A 105 MLTAK 109 (246)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99998
No 85
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=96.15 E-value=0.036 Score=41.30 Aligned_cols=80 Identities=11% Similarity=0.046 Sum_probs=58.0
Q ss_pred cCCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEee
Q psy5204 66 FDENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELA 145 (209)
Q Consensus 66 ~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~ 145 (209)
.+|...+.++...+++.+++.+....||..+ .|-|.+ .-++.||+|+++.+. +++ ....++
T Consensus 32 G~P~~~~~~~~~~~~g~~~~g~w~~~pG~~~-~~~~~~-~E~~~Vl~G~~~l~~----~~g-------------~~~~l~ 92 (123)
T 3bcw_A 32 GDASFRTVTAFEGGQGKVESGVWESTSGSFQ-SNTTGY-IEYCHIIEGEARLVD----PDG-------------TVHAVK 92 (123)
T ss_dssp ECCCEEEEEEEEETTTTEEEEEEEEEEEEEE-CCCTTE-EEEEEEEEEEEEEEC----TTC-------------CEEEEE
T ss_pred CCCCeeEEEEEeCCCCCEEEEEEEECCCcee-eEcCCC-cEEEEEEEEEEEEEE----CCC-------------eEEEEC
Confidence 4444444443323578899999999999887 688863 567789999998763 222 257799
Q ss_pred CCcEEEEcCCCCeEEEecCC
Q psy5204 146 ENDVCYINDSMGLHKVGNSG 165 (209)
Q Consensus 146 ~G~v~~~~~~~~iH~v~n~~ 165 (209)
+||+.++.+ ..-|+.+|.+
T Consensus 93 ~GD~~~ip~-g~~h~~~~~~ 111 (123)
T 3bcw_A 93 AGDAFIMPE-GYTGRWEVDR 111 (123)
T ss_dssp TTCEEEECT-TCCCEEEEEE
T ss_pred CCCEEEECC-CCeEEEEECC
Confidence 999988875 5689999875
No 86
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=96.14 E-value=0.046 Score=42.36 Aligned_cols=86 Identities=9% Similarity=0.055 Sum_probs=62.6
Q ss_pred ceEEeeecC-CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE
Q psy5204 71 YTRNLVDEG-DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 71 Y~R~ll~~~-~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v 149 (209)
|.+.++..+ +..+++.++.|. |...+.| |. ..-+..||+|+++.+. ++ ....+++||+
T Consensus 53 ~i~~l~s~~~~~~~s~g~~~~e-~~~~~~~-~~-~eE~~yVLeG~~~l~i-----~g-------------~~~~l~~GD~ 111 (151)
T 4axo_A 53 YTKDLFTLEESPRLGCGMMEMK-ETTFDWT-LN-YDEIDYVIDGTLDIII-----DG-------------RKVSASSGEL 111 (151)
T ss_dssp EEEECSCTTTCSSCEEEEEEEE-EEEEEEE-CS-SEEEEEEEEEEEEEEE-----TT-------------EEEEEETTCE
T ss_pred EEEEeecCCCCCcEEEEEEEEc-CccccEe-CC-CcEEEEEEEeEEEEEE-----CC-------------EEEEEcCCCE
Confidence 777777643 458999999997 4443433 33 4567789999999874 11 3678999999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
.++++ ..-|+..|+ +++.-|=|..|+..
T Consensus 112 i~iP~-G~~h~~~n~---~~a~~l~V~~P~~~ 139 (151)
T 4axo_A 112 IFIPK-GSKIQFSVP---DYARFIYVTYPADW 139 (151)
T ss_dssp EEECT-TCEEEEEEE---EEEEEEEEEECSCC
T ss_pred EEECC-CCEEEEEeC---CCEEEEEEECCCCc
Confidence 99876 458999997 36777777777754
No 87
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=96.05 E-value=0.012 Score=41.75 Aligned_cols=66 Identities=11% Similarity=0.123 Sum_probs=46.6
Q ss_pred EEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCC
Q psy5204 88 LCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPH 167 (209)
Q Consensus 88 ~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~ 167 (209)
+...||. .+.|-|.++.-++.|++|+++... +++ ....+.+||+.++++ +..|++.|.+
T Consensus 33 ~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~----~~~-------------~~~~l~~Gd~~~ip~-~~~H~~~~~~-- 91 (107)
T 2i45_A 33 LVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF----ADG-------------GSMTIREGEMAVVPK-SVSHRPRSEN-- 91 (107)
T ss_dssp EEEEEEE-CCCBCC--CCEEEEESSSCEEEEE----TTS-------------CEEEECTTEEEEECT-TCCEEEEEEE--
T ss_pred EEECCCC-CcceeCCCCCEEEEEEeCEEEEEE----CCC-------------cEEEECCCCEEEECC-CCcEeeEeCC--
Confidence 4556786 569999865678899999998764 110 267799999999876 5699999953
Q ss_pred CceEEEEE
Q psy5204 168 PAAVSLHL 175 (209)
Q Consensus 168 ~~avSLHv 175 (209)
++..|-+
T Consensus 92 -~~~~l~i 98 (107)
T 2i45_A 92 -GCSLVLI 98 (107)
T ss_dssp -EEEEEEE
T ss_pred -CeEEEEE
Confidence 4555543
No 88
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=96.02 E-value=0.068 Score=42.46 Aligned_cols=104 Identities=14% Similarity=0.031 Sum_probs=67.3
Q ss_pred ceEEeee-cCCCceEEEEEEccCCCccCCCCCCC------c-eEEEEEEEeEEEEEEeeCCCCCCC-----CCCCCcccc
Q psy5204 71 YTRNLVD-EGDGKFNLILLCWSQGQASSIHDHAQ------A-HCFMKMLQGCLTEVRYQEPNHTSD-----EIGQDRPLS 137 (209)
Q Consensus 71 Y~R~ll~-~~~~~~~l~~~~W~pG~~spiHDH~~------s-~~~~~vl~G~l~e~~y~~~~~~~~-----~~~~~~~l~ 137 (209)
++-.|+- .-+.+|-.-.|...|||.+|.|-|.. - --|+ |+.|.++... ..+.... ..|....+.
T Consensus 40 ~Gl~l~t~~N~~~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~i-vr~G~v~l~~--~g~~~~~~~v~v~dg~~~~~~ 116 (175)
T 2y0o_A 40 VGLQLFVYVNTDRYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFR-CRYGKVYLYV--EGEKTPLPKVLPPQEDREHYT 116 (175)
T ss_dssp BCEEEEEEEECSSEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEE-EEEEEEEEEE--SSSCCSSCSCCCCGGGGGGCC
T ss_pred cCcEEEEEECCcCceEEEEEECCCCcCCceECCCCCCCCCCceeEE-EecCEEEEEE--CCccccCcceeccCCceeeec
Confidence 4444432 21346888889999999999999996 3 3444 8899976554 2111100 012223345
Q ss_pred ccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCCC
Q psy5204 138 EISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 138 ~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
+.....+.||+.+.+.+ +..|++.|.. +. +-|--.+++..
T Consensus 117 a~~~i~L~pGesvtIpp-g~~H~f~age--eg-vli~EvSt~~d 156 (175)
T 2y0o_A 117 VWHEIELEPGGQYTIPP-NTKHWFQAGE--EG-AVVTEMSSTST 156 (175)
T ss_dssp CCEEEEECTTCEEEECT-TCCEEEEEEE--EE-EEEEEEEECCC
T ss_pred CCcEEEECCCCEEEECC-CCcEEEEeCC--CC-EEEEEEeCCCC
Confidence 55678999999999886 5699999942 23 66666666644
No 89
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=95.85 E-value=0.026 Score=50.72 Aligned_cols=73 Identities=14% Similarity=0.044 Sum_probs=59.1
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
..+.|..+...||...++| |.++..++.|++|+.....-.. +. . ....+++||+.+++. +-+|-
T Consensus 42 ~~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~--~~---------~---~~~~l~~GDv~~~P~-G~~h~ 105 (418)
T 3s7i_A 42 QNHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG--NN---------R---KSFNLDEGHALRIPS-GFISY 105 (418)
T ss_dssp TTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS--SC---------E---EEEEEETTEEEEECT-TCEEE
T ss_pred cceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec--CC---------E---EEEEecCCCEEEECC-CCeEE
Confidence 5789999999999999999 9999999999999998877531 11 1 367899999999875 56999
Q ss_pred EecCCCCCc
Q psy5204 161 VGNSGPHPA 169 (209)
Q Consensus 161 v~n~~~~~~ 169 (209)
+.|.+.++.
T Consensus 106 ~~N~g~~~~ 114 (418)
T 3s7i_A 106 ILNRHDNQN 114 (418)
T ss_dssp EEECCSSCC
T ss_pred EEecCCCcc
Confidence 999864333
No 90
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=95.75 E-value=0.041 Score=48.14 Aligned_cols=71 Identities=10% Similarity=0.148 Sum_probs=56.9
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+...+...+||+.+++|-|..+ .+..|++|+-+.+. ++ .+..+++||+.++++ ...|++
T Consensus 267 ti~~~~~~l~pG~~~~~H~h~~~-ev~~v~~G~g~~~v-----~~-------------~~~~~~~GD~~~vP~-~~~H~~ 326 (354)
T 2d40_A 267 SMGAFLQLLPKGFASRVARTTDS-TIYHVVEGSGQVII-----GN-------------ETFSFSAKDIFVVPT-WHGVSF 326 (354)
T ss_dssp SCEEEEEEECTTCBCCCBEESSC-EEEEEEEEEEEEEE-----TT-------------EEEEEETTCEEEECT-TCCEEE
T ss_pred cceeEEEEECCCCCCCceecCCc-EEEEEEeCeEEEEE-----CC-------------EEEEEcCCCEEEECC-CCeEEE
Confidence 56777889999999999999976 78999999988876 11 367899999988876 568999
Q ss_pred ecCCCCCceEEEEE
Q psy5204 162 GNSGPHPAAVSLHL 175 (209)
Q Consensus 162 ~n~~~~~~avSLHv 175 (209)
.|. ++++-|=+
T Consensus 327 ~n~---e~~~l~~~ 337 (354)
T 2d40_A 327 QTT---QDSVLFSF 337 (354)
T ss_dssp EEE---EEEEEEEE
T ss_pred EeC---CCEEEEEE
Confidence 994 45555544
No 91
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=95.62 E-value=0.052 Score=49.81 Aligned_cols=82 Identities=7% Similarity=-0.066 Sum_probs=63.0
Q ss_pred eEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEe
Q psy5204 83 FNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVG 162 (209)
Q Consensus 83 ~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~ 162 (209)
+++..+...||..-++|-|+.++-|+.|++|+.+.+...- ++. ..-...|.+|||.+|+. .-+|.+.
T Consensus 358 iS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~--~g~----------~~f~~~l~~GDV~v~P~-G~~H~~~ 424 (496)
T 3ksc_A 358 LSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNC--NGN----------TVFDGELEAGRALTVPQ-NYAVAAK 424 (496)
T ss_dssp CEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECT--TSC----------EEEEEEEETTCEEEECT-TCEEEEE
T ss_pred eeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeC--CCc----------EEEEEEecCCeEEEECC-CCEEEEE
Confidence 5888999999999999999999999999999999998742 111 11245799999988864 5699776
Q ss_pred cCCCCCceEEEEEeCCC
Q psy5204 163 NSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 163 n~~~~~~avSLHvY~pp 179 (209)
|. ++++.-|=+..-+
T Consensus 425 a~--~e~~~~l~f~~s~ 439 (496)
T 3ksc_A 425 SL--SDRFSYVAFKTND 439 (496)
T ss_dssp EC--SSEEEEEEEESST
T ss_pred eC--CCCEEEEEEECCC
Confidence 65 3667767666443
No 92
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=95.61 E-value=0.031 Score=49.91 Aligned_cols=83 Identities=12% Similarity=0.049 Sum_probs=67.1
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE------EEEcC
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV------CYIND 154 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v------~~~~~ 154 (209)
+++++..+...||...++|-|. +..++.|++|+.+.....- ++ . .+..+++||+ .+++.
T Consensus 50 ~~~s~~~~~l~pgg~~~ph~~~-a~ei~yVl~G~~~v~~v~~--~~---------~---~~~~l~~GDv~~~~~~~~iP~ 114 (397)
T 2phl_A 50 EDYRLVEFRSKPETLLLPQQAD-AELLLVVRSGSAILVLVKP--DD---------R---REYFFLTSDNPIFSDHQKIPA 114 (397)
T ss_dssp TTCEEEEEEECSSEEEEEEEES-EEEEEEEEESEEEEEEEET--TT---------E---EEEEEEESSCTTSCSEEEECT
T ss_pred ccEEEEEEEECCCcCccCEecC-CCeEEEEEeeeEEEEEEeC--CC---------c---EEEEECCCCcccccceEEECC
Confidence 4699999999999999999996 6789999999999998742 11 1 2578999999 88875
Q ss_pred CCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 155 SMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 155 ~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
+-+|-+.|.+.+++++-|=++.+.
T Consensus 115 -G~~h~~~N~g~~~~l~~i~~~~~~ 138 (397)
T 2phl_A 115 -GTIFYLVNPDPKEDLRIIQLAMPV 138 (397)
T ss_dssp -TCEEEEEECCSSCCEEEEEEEEES
T ss_pred -CCcEEEEeCCCCCCeEEEEeecCC
Confidence 569999999745778777776543
No 93
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=95.59 E-value=0.025 Score=52.23 Aligned_cols=79 Identities=11% Similarity=0.087 Sum_probs=59.5
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+++..+...||...++|-|+++.-|+.|++|..+.....- ++. ..-...|.+||+.+|+. .-+|..
T Consensus 393 giS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~--~G~----------~v~~~~L~~GDV~v~P~-G~~H~~ 459 (531)
T 3fz3_A 393 RLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNE--NGD----------AILDQEVQQGQLFIVPQ-NHGVIQ 459 (531)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECT--TSC----------EEEEEEEETTCEEEECT-TCEEEE
T ss_pred ceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeC--CCc----------EEEEEEecCCeEEEECC-CCeEEE
Confidence 57899999999999999999998899999999999998642 111 11257899999998875 569965
Q ss_pred ecCCCCCceEEEEEe
Q psy5204 162 GNSGPHPAAVSLHLY 176 (209)
Q Consensus 162 ~n~~~~~~avSLHvY 176 (209)
. .+ ++...-+ ++
T Consensus 460 ~-ag-~e~l~fl-aF 471 (531)
T 3fz3_A 460 Q-AG-NQGFEYF-AF 471 (531)
T ss_dssp E-EE-EEEEEEE-EE
T ss_pred e-cC-CCCEEEE-EE
Confidence 4 44 3444434 55
No 94
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.41 E-value=0.35 Score=41.30 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=62.2
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeC-C---cEEEEcCCCC
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAE-N---DVCYINDSMG 157 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~-G---~v~~~~~~~~ 157 (209)
.-...+..-.||..-..|-|....-.+.|++|+.....+... .+ ....+.. | ++.++++ +-
T Consensus 271 ~~q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~ip~-g~ 335 (369)
T 3st7_A 271 RGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVN-DD-------------EIIEYYVSGDKLEVVDIPV-GY 335 (369)
T ss_dssp SCEEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETT-CC-------------CCEEEEEETTBCCEEEECT-TE
T ss_pred CceEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCC-CC-------------cEEEEEecCCcceEEEeCC-Cc
Confidence 445555667999999999999888899999999888776221 11 2344444 6 7888876 55
Q ss_pred eEEEecCCCCCceEEEEEeCCCCC
Q psy5204 158 LHKVGNSGPHPAAVSLHLYSPPFN 181 (209)
Q Consensus 158 iH~v~n~~~~~~avSLHvY~pp~~ 181 (209)
.|.+.|.| +++++.+=+-...+.
T Consensus 336 ~h~~~n~~-~~~~~~~~~~~~~y~ 358 (369)
T 3st7_A 336 THNIENLG-DTDMVTIMWVNEMFD 358 (369)
T ss_dssp EEEEEECS-SSCEEEEEEESSCCC
T ss_pred eEEeEEcC-CCcEEEEEecCcccC
Confidence 99999998 578988877766653
No 95
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=95.37 E-value=0.065 Score=45.01 Aligned_cols=71 Identities=10% Similarity=0.115 Sum_probs=55.8
Q ss_pred EccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC-eEEEecCCCC
Q psy5204 89 CWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG-LHKVGNSGPH 167 (209)
Q Consensus 89 ~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~-iH~v~n~~~~ 167 (209)
.-.||..-+.|=|.+..-+-.|++|+++..- +.+ ...++++|+|-+|....| +|+-.|++.+
T Consensus 70 ~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~D----S~G-------------n~~~i~~GdvQ~MtAG~GI~HsE~n~~~~ 132 (256)
T 2vec_A 70 VLAPGAAFQPRTYPKVDILNVILDGEAEYRD----SEG-------------NHVQASAGEALLLSTQPGVSYSEHNLSKD 132 (256)
T ss_dssp EECTTCEEEEECCSSEEEEEEEEESEEEEEE----TTS-------------CEEEEETTEEEEECCCTTCCEEEEECCSS
T ss_pred ccCCCCccCCcCCCCcEEEEEEEeeEEEEEe----CCC-------------CEEEECCCeEEEEECCCCeEEEEEECCCC
Confidence 3578999999999998888899999998763 112 367899999999976455 8999998645
Q ss_pred CceEEEEEe
Q psy5204 168 PAAVSLHLY 176 (209)
Q Consensus 168 ~~avSLHvY 176 (209)
++.-.|-+.
T Consensus 133 ~~l~~lQlW 141 (256)
T 2vec_A 133 KPLTRMQLW 141 (256)
T ss_dssp SCEEEEEEE
T ss_pred ceEEEEEEE
Confidence 676666665
No 96
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=95.35 E-value=0.075 Score=41.32 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=66.5
Q ss_pred cceEEeee-cCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCc
Q psy5204 70 RYTRNLVD-EGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEND 148 (209)
Q Consensus 70 ~Y~R~ll~-~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~ 148 (209)
.-.|.+|. .+....-..++-++||..-|.|-|.+ ..-+.||+|.+.... +. . .....+.+|+
T Consensus 32 Gv~~k~L~~~~e~g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~~------Gd--------~--~~~~~~~aGs 94 (153)
T 3bal_A 32 GITWQLLHSSPETSSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEVRG------GE--------Q--EGGSTAYAPS 94 (153)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEETT------CG--------G--GTSEEEESSE
T ss_pred CeEEEEEEECCccceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEecC------cc--------c--cCccccCCCe
Confidence 34455554 24455666677999999999999997 567899999996321 11 0 1145678998
Q ss_pred EEEEcCCCCeEEEecCCCCCceEEEEEeCCCCCcceEEECCCCceE
Q psy5204 149 VCYINDSMGLHKVGNSGPHPAAVSLHLYSPPFNICSSFDAQTGVKS 194 (209)
Q Consensus 149 v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~~~~~~yd~~~g~~~ 194 (209)
..+-. ....|...... ++..+-+++-|| +..+|++ |...
T Consensus 95 Yv~eP-pGs~H~p~~~~-~~~~~~~~~~Gp----~~y~d~~-g~~~ 133 (153)
T 3bal_A 95 YGFES-SGALHGKTFFP-VESQFYMTFLGP----LNFIDDN-GKVI 133 (153)
T ss_dssp EEEEC-TTCEESCCEES-SCEEEEEEEESC----EEEECTT-SCEE
T ss_pred EEEcC-CCCcccceeCC-CCeEEEEEEECC----eEEECCC-CCEe
Confidence 65544 46799754432 355677787777 4666765 5544
No 97
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=95.20 E-value=0.029 Score=50.11 Aligned_cols=79 Identities=14% Similarity=0.029 Sum_probs=61.0
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
+-.+++..+...||...++|-|..+.-|+.|++|+.+.+........... -...-...+.+|||.+++. ...|
T Consensus 236 ~l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~------g~~~~~~~l~~GDV~vvP~-G~~h 308 (397)
T 2phl_A 236 SLNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETL------EYESYRAELSKDDVFVIPA-AYPV 308 (397)
T ss_dssp TTTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCS------CEEEEEEEEETTCEEEECT-TCCE
T ss_pred cCCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCC------CceEEEEEecCCCEEEECC-CCeE
Confidence 46899999999999999999999999999999999999987531000000 0122367899999988875 5699
Q ss_pred EEecCC
Q psy5204 160 KVGNSG 165 (209)
Q Consensus 160 ~v~n~~ 165 (209)
.+.|.+
T Consensus 309 ~~~n~~ 314 (397)
T 2phl_A 309 AIKATS 314 (397)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 999985
No 98
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=94.91 E-value=0.12 Score=42.44 Aligned_cols=71 Identities=15% Similarity=0.197 Sum_probs=48.9
Q ss_pred ccceEEeeec-CC-CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeC
Q psy5204 69 NRYTRNLVDE-GD-GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAE 146 (209)
Q Consensus 69 ~~Y~R~ll~~-~~-~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~ 146 (209)
....|..|+. +. ....+.++.|.||...|.|.|.+ .-.+.||+|++... ...+.+
T Consensus 27 ~Gv~~~~L~~~~~e~g~~~~lvr~~pG~~~p~H~H~g-~Ee~~VL~G~f~d~----------------------~~~~~~ 83 (223)
T 3o14_A 27 KGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQDE----------------------HGDYPA 83 (223)
T ss_dssp TTEEEEEEEEESSSSCEEEEEEEECTTEECCCEECTT-CEEEEEEEEEEEET----------------------TEEEET
T ss_pred CCEEEEEeecCCCccccEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEEC----------------------CeEECC
Confidence 3466777764 22 23467789999999999999986 56688999998621 235677
Q ss_pred CcEEEEcCCCCeEEEec
Q psy5204 147 NDVCYINDSMGLHKVGN 163 (209)
Q Consensus 147 G~v~~~~~~~~iH~v~n 163 (209)
|+..+.++ ...|....
T Consensus 84 Gd~~~~P~-g~~H~p~a 99 (223)
T 3o14_A 84 GTYVRNPP-TTSHVPGS 99 (223)
T ss_dssp TEEEEECT-TCEECCEE
T ss_pred CeEEEeCC-CCccccEe
Confidence 77655543 44676654
No 99
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=94.91 E-value=0.1 Score=43.30 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=58.7
Q ss_pred EccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC-eEEEecCCCC
Q psy5204 89 CWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG-LHKVGNSGPH 167 (209)
Q Consensus 89 ~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~-iH~v~n~~~~ 167 (209)
.-.||..-|.|=|.|..-+-.|++|+++..- +-+ ...++++|+|-+|....| +|+-.|++.+
T Consensus 47 ~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~D----S~G-------------n~~~i~~GdvQ~MtAG~GI~HsE~~~~~~ 109 (242)
T 1tq5_A 47 VIEAGQGFGTHPHKDMEILTYVLEGTVEHQD----SMG-------------NKEQVPAGEFQIMSAGTGIRHSEYNPSST 109 (242)
T ss_dssp EECTTCEEEEEEECSCEEEEEEEESEEEEEE----SSS-------------CEEEEETTCEEEEECTTCEEEEEECCCSS
T ss_pred eeCCCCcCCCcCCCCcEEEEEEEEeEEEEEe----CCC-------------CcEEECCCcEEEEECCCCcEEEEEcCCCC
Confidence 3478899999999999999999999998773 112 367899999999976556 8999998645
Q ss_pred CceEEEEEeCCCCC
Q psy5204 168 PAAVSLHLYSPPFN 181 (209)
Q Consensus 168 ~~avSLHvY~pp~~ 181 (209)
++.-.|-+.-.|-.
T Consensus 110 ~~l~~lQlWv~P~~ 123 (242)
T 1tq5_A 110 ERLHLYQIWIMPEE 123 (242)
T ss_dssp CCEEEEEEEECCSS
T ss_pred CeEEEEEEEEcchh
Confidence 67777777644433
No 100
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=94.81 E-value=0.19 Score=45.67 Aligned_cols=96 Identities=14% Similarity=-0.057 Sum_probs=69.1
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCC-CCCCCC-----------------------CCcccc
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNH-TSDEIG-----------------------QDRPLS 137 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~-~~~~~~-----------------------~~~~l~ 137 (209)
.+++.-+...||...++|-| ++.-++.|++|+........... ...+.. ....-.
T Consensus 49 gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (465)
T 3qac_A 49 GVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQ 127 (465)
T ss_dssp TCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC------------------------------CCC
T ss_pred ceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccccccccccccc
Confidence 78899999999999999999 57899999999988776532111 100000 000001
Q ss_pred ccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCC
Q psy5204 138 EISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 138 ~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
......+++|||++++. +..|-+.|.+ +++++.|=++.+..
T Consensus 128 hqk~~~~~~GDvi~iPa-G~~hw~~N~G-~~~lv~v~~~d~~n 168 (465)
T 3qac_A 128 HQKIRHLREGDIFAMPA-GVSHWAYNNG-DQPLVAVILIDTAN 168 (465)
T ss_dssp CCCEEEEETTEEEEECT-TCEEEEECCS-SSCEEEEEEECTTS
T ss_pred ccceeeecCCCEEEECC-CCeEEEEcCC-CCCEEEEEEEcCCC
Confidence 12356899999999875 5699999998 79999999988764
No 101
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=94.67 E-value=0.11 Score=47.05 Aligned_cols=95 Identities=13% Similarity=-0.086 Sum_probs=65.9
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCC-CCCCC------CC-CccccccceEEeeCCcEEEEc
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNH-TSDEI------GQ-DRPLSEISRTELAENDVCYIN 153 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~-~~~~~------~~-~~~l~~~~~~~~~~G~v~~~~ 153 (209)
.+++.-+...||...++|-|. +..++.|++|+.....-.-... ...+. +. ...-.......+++||+.+++
T Consensus 62 gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iP 140 (459)
T 2e9q_A 62 GVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVP 140 (459)
T ss_dssp TEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEEC
T ss_pred ceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCEEEEC
Confidence 678889999999999999998 5789999999998776421100 00000 00 000001125689999999987
Q ss_pred CCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 154 DSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 154 ~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
. +-+|-+.|.+ +++++.|=+..+.
T Consensus 141 a-G~~H~~~N~g-~~~l~~l~~~d~~ 164 (459)
T 2e9q_A 141 A-GVSHWMYNRG-QSDLVLIVFADTR 164 (459)
T ss_dssp T-TCCEEEEECS-SSCEEEEEEEESS
T ss_pred C-CCCEEEEeCC-CCCEEEEEEecCC
Confidence 5 5699999998 6888888777644
No 102
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=94.65 E-value=0.16 Score=46.36 Aligned_cols=96 Identities=11% Similarity=-0.062 Sum_probs=67.5
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCC-CCCCC------CCCccc--cccceEEeeCCcEEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNH-TSDEI------GQDRPL--SEISRTELAENDVCYI 152 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~-~~~~~------~~~~~l--~~~~~~~~~~G~v~~~ 152 (209)
.+++.-+...||...++|-|. +.-++.|++|......-.-... ...++ +..... .......+++||++++
T Consensus 47 gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~i 125 (476)
T 1fxz_A 47 GVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAV 125 (476)
T ss_dssp TCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEECTTEEEEE
T ss_pred ceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEeCCCEEEE
Confidence 688999999999999999998 5689999999988776421100 00000 000000 0113678999999998
Q ss_pred cCCCCeEEEecCCCCCceEEEEEeCCCC
Q psy5204 153 NDSMGLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 153 ~~~~~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
+. +-+|-+.|.+ +++++.|=++.+..
T Consensus 126 Pa-G~~h~~~N~G-~~~l~~i~~~d~~n 151 (476)
T 1fxz_A 126 PT-GVAWWMYNNE-DTPVVAVSIIDTNS 151 (476)
T ss_dssp CT-TCEEEEEECS-SSCEEEEEEECTTC
T ss_pred CC-CCcEEEEeCC-CCCEEEEEEecCCC
Confidence 75 5699999998 68999998887554
No 103
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=94.56 E-value=0.12 Score=47.01 Aligned_cols=82 Identities=9% Similarity=-0.028 Sum_probs=62.1
Q ss_pred eEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEe
Q psy5204 83 FNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVG 162 (209)
Q Consensus 83 ~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~ 162 (209)
+++..+...||...++|-|+.++-|+.|++|+.+...+.- .+. ..-...|.+|||.+|+. .-+|-+.
T Consensus 323 iS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~--~g~----------~~f~~~l~~GDVfvvP~-g~~h~~~ 389 (465)
T 3qac_A 323 LSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVND--QGQ----------SVFDEELSRGQLVVVPQ-NFAIVKQ 389 (465)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECT--TSC----------EEEEEEEETTCEEEECT-TCEEEEE
T ss_pred eeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeC--CCc----------EEEEEEecCCeEEEECC-CcEEEEE
Confidence 6888999999999999999999999999999999998742 111 11256799999988865 4588764
Q ss_pred cCCCCCceEEEEEeCCC
Q psy5204 163 NSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 163 n~~~~~~avSLHvY~pp 179 (209)
++ ++++.-|=++..+
T Consensus 390 -ag-~e~~~~l~f~~s~ 404 (465)
T 3qac_A 390 -AF-EDGFEWVSFKTSE 404 (465)
T ss_dssp -EE-EEEEEEEEEESST
T ss_pred -cC-CCCeEEEEEecCC
Confidence 44 4566666665433
No 104
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.19 E-value=0.081 Score=47.95 Aligned_cols=97 Identities=14% Similarity=0.067 Sum_probs=64.6
Q ss_pred CceEEEEEEccCCCccCCCCC-CCceEEEEEEEeEEEEEEeeCCCCCC----------CCCCC--CccccccceEEeeCC
Q psy5204 81 GKFNLILLCWSQGQASSIHDH-AQAHCFMKMLQGCLTEVRYQEPNHTS----------DEIGQ--DRPLSEISRTELAEN 147 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH-~~s~~~~~vl~G~l~e~~y~~~~~~~----------~~~~~--~~~l~~~~~~~~~~G 147 (209)
+.+..+++.-++|..|+.|-. .++..|..++.|.=+-..|-..+... ..... .......-+.++.+|
T Consensus 194 P~~~r~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pG 273 (451)
T 2yu1_A 194 PKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQG 273 (451)
T ss_dssp CCCCCEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTT
T ss_pred CchheEEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCC
Confidence 456678888999999999954 45578999999999988875332110 00000 000122346788999
Q ss_pred cEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 148 DVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 148 ~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
++.+++. +=+|.|.|.. +..+|+-......
T Consensus 274 E~LfIPs-GWwH~V~nle-dsIait~NF~~~~ 303 (451)
T 2yu1_A 274 YTFVIPS-GWIHAVYTPT-DTLVFGGNFLHSF 303 (451)
T ss_dssp CEEEECT-TCEEEEECSS-CEEEEEEEECCSS
T ss_pred cEEEeCC-CceEEEecCC-CeEEEeeeeCCcc
Confidence 9999875 3399999996 4566666766543
No 105
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=94.10 E-value=0.26 Score=45.05 Aligned_cols=95 Identities=13% Similarity=-0.057 Sum_probs=66.3
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCC-CCCCCC------CC-c----cccccceEEeeCCcE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNH-TSDEIG------QD-R----PLSEISRTELAENDV 149 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~-~~~~~~------~~-~----~l~~~~~~~~~~G~v 149 (209)
.+.+..+...||...++|-|. +..++.|++|+.....-.-... ...++. +. . .-.......|++|||
T Consensus 44 gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDv 122 (493)
T 2d5f_A 44 GVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDV 122 (493)
T ss_dssp TCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESCEEEEETTEE
T ss_pred CEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccceEEEecCCCE
Confidence 489999999999999999998 4689999999988876421100 000000 00 0 000113568999999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
++++. +.+|-+.|.+ +++++.|=++.+.
T Consensus 123 i~iPa-G~~h~~~N~g-~~~l~~v~~~d~~ 150 (493)
T 2d5f_A 123 LVIPP-GVPYWTYNTG-DEPVVAISLLDTS 150 (493)
T ss_dssp EEECT-TCCEEEEECS-SSCEEEEEEECTT
T ss_pred EEECC-CCcEEEEeCC-CCCEEEEEEecCc
Confidence 99875 5699999998 6899888877654
No 106
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=93.54 E-value=0.13 Score=46.35 Aligned_cols=80 Identities=15% Similarity=0.078 Sum_probs=57.6
Q ss_pred eEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCC--CCCCCCCccccccceEEeeCCcEEEEcCCCCeEE
Q psy5204 83 FNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHT--SDEIGQDRPLSEISRTELAENDVCYINDSMGLHK 160 (209)
Q Consensus 83 ~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~--~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~ 160 (209)
+++..+...||...++|-|+.+.-|+.|++|+.+.+........ ..+ +. ..-...-...|.+|||.+++. ...|.
T Consensus 266 is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~-~~-~~~~r~~~~~l~~Gdv~vvP~-g~~h~ 342 (434)
T 2ea7_A 266 VFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQ-EE-SLEVQRYRAELSEDDVFVIPA-AYPVA 342 (434)
T ss_dssp EEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTS-CC-CEEEEEEEEEECTTCEEEECT-TCCEE
T ss_pred cceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCcccccccc-cc-CcceEEEEEEecCCcEEEECC-CCeEE
Confidence 77889999999999999999999999999999999887432100 000 00 000011244789999998875 56999
Q ss_pred EecCC
Q psy5204 161 VGNSG 165 (209)
Q Consensus 161 v~n~~ 165 (209)
+.|.+
T Consensus 343 ~~n~~ 347 (434)
T 2ea7_A 343 INATS 347 (434)
T ss_dssp EEESS
T ss_pred EEcCC
Confidence 99883
No 107
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=93.47 E-value=0.16 Score=45.45 Aligned_cols=81 Identities=16% Similarity=0.060 Sum_probs=57.1
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCC--CCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNH--TSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~--~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
.+++..+...||...++|-|..+.-|+.|++|+.+......... +..+.+... -...-...+.+|||.+++. ...|
T Consensus 248 ~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~-~~~~~~~~l~~Gdv~vvP~-g~~h 325 (416)
T 1uij_A 248 DIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPL-EVQRYRAELSEDDVFVIPA-AYPF 325 (416)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------C-CEEEEEEEEETTCEEEECT-TCCE
T ss_pred CcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCcccccccccccc-ceEEEEEEecCCcEEEECC-CCeE
Confidence 37888999999999999999999999999999999988753210 000000000 0011244799999999875 5699
Q ss_pred EEecC
Q psy5204 160 KVGNS 164 (209)
Q Consensus 160 ~v~n~ 164 (209)
.+.|.
T Consensus 326 ~~~n~ 330 (416)
T 1uij_A 326 VVNAT 330 (416)
T ss_dssp EEEES
T ss_pred EEEcC
Confidence 99988
No 108
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=93.14 E-value=0.49 Score=43.36 Aligned_cols=97 Identities=11% Similarity=-0.072 Sum_probs=67.3
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCC-CCCCCCC-----C--CCccccccceEEeeCCcEEEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEP-NHTSDEI-----G--QDRPLSEISRTELAENDVCYI 152 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~-~~~~~~~-----~--~~~~l~~~~~~~~~~G~v~~~ 152 (209)
-.+++.-+...||...++|-|. +.-++.|++|+.....-... .....+. + ....-.......|.+|||..+
T Consensus 44 ~gvs~~R~~i~pggl~lPh~~~-A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~vi 122 (496)
T 3ksc_A 44 AGVALSRATLQRNALRRPYYSN-APQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAV 122 (496)
T ss_dssp HTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEE
T ss_pred CCceEEEEEecCCCEeCceEcC-CCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCCEEEE
Confidence 4788888999999999999994 78899999999877664221 0110000 0 000001122458999999988
Q ss_pred cCCCCeEEEecCCCCCceEEEEEeCCCC
Q psy5204 153 NDSMGLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 153 ~~~~~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
+. +.+|-+.|.+ +++++.|=++.+..
T Consensus 123 Pa-G~~h~~~N~G-~~~lv~v~~~d~~n 148 (496)
T 3ksc_A 123 PT-GIVFWMYNDQ-DTPVIAVSLTDIRS 148 (496)
T ss_dssp CT-TCEEEEEECS-SSCEEEEEEECTTC
T ss_pred CC-CCcEEEEcCC-CCCEEEEEEeccCc
Confidence 75 5699999998 68999988887654
No 109
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=93.04 E-value=0.55 Score=43.15 Aligned_cols=97 Identities=14% Similarity=-0.040 Sum_probs=67.6
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCC-CCCCCC-----------------CCCcc----ccc
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPN-HTSDEI-----------------GQDRP----LSE 138 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~-~~~~~~-----------------~~~~~----l~~ 138 (209)
-.+++.-+...||...++|-|. +..++.|++|......-.... +...++ +.... -..
T Consensus 46 ~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 124 (510)
T 3c3v_A 46 AGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSH 124 (510)
T ss_dssp HTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC--------------------CEEEEE
T ss_pred CcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccccccccccccc
Confidence 4679999999999999999998 568999999998777642210 000000 00000 001
Q ss_pred cceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCC
Q psy5204 139 ISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 139 ~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
.....+++|||++++. +-+|-+.|.+ +++++.|=++.+..
T Consensus 125 qkv~~v~~GDvi~iPa-G~~hw~~N~g-~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 125 QKVHRFNEGDLIAVPT-GVAFWLYNDH-DTDVVAVSLTDTNN 164 (510)
T ss_dssp SCCEEECTTEEEEECT-TCEEEEEECS-SSCEEEEEEECTTB
T ss_pred ceEEEecCCCEEEECC-CCCEEEEeCC-CCCEEEEEEeCCCC
Confidence 1246899999999875 5699999998 68999888886663
No 110
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=92.89 E-value=0.55 Score=40.71 Aligned_cols=65 Identities=17% Similarity=0.187 Sum_probs=49.5
Q ss_pred ceEEEEEEccC---CCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCe
Q psy5204 82 KFNLILLCWSQ---GQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGL 158 (209)
Q Consensus 82 ~~~l~~~~W~p---G~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~i 158 (209)
.|.+-.+.-.+ |+..|-|.|.. ..++.||+|+++.+. ++. ....+++||+++|+. +..
T Consensus 248 ~f~~~~i~~~~~~~g~~~~~h~~~~-~~~~~vleG~~~i~i-----~g~------------~~~~l~~Gd~~~iPa-g~~ 308 (350)
T 1juh_A 248 NYTLSTISMSTTPSTVTVPTWSFPG-ACAFQVQEGRVVVQI-----GDY------------AATELGSGDVAFIPG-GVE 308 (350)
T ss_dssp CEEEEEEEECCCCTTSCCCCBCCSS-CEEEEEEESCEEEEE-----TTS------------CCEEECTTCEEEECT-TCC
T ss_pred EEEEEEEeeccccCCCCCCcccCCC-cEEEEEEeeEEEEEE-----CCe------------EEEEeCCCCEEEECC-CCC
Confidence 56665555555 66888899985 677999999999876 110 257899999988875 569
Q ss_pred EEEecCC
Q psy5204 159 HKVGNSG 165 (209)
Q Consensus 159 H~v~n~~ 165 (209)
|.+.|.+
T Consensus 309 h~~~~~~ 315 (350)
T 1juh_A 309 FKYYSEA 315 (350)
T ss_dssp EEEEESS
T ss_pred EEEEecC
Confidence 9999986
No 111
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=92.76 E-value=0.38 Score=34.23 Aligned_cols=58 Identities=5% Similarity=-0.089 Sum_probs=41.8
Q ss_pred EEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCC
Q psy5204 87 LLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSG 165 (209)
Q Consensus 87 ~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~ 165 (209)
+....||.. +.| |.. .-++.||+|+++... +++ ....+++||+.++++ +..|++.|.+
T Consensus 35 ~~~~~pg~~-~~h-H~~-~E~~~Vl~G~~~~~i----~~g-------------~~~~l~~GD~i~ip~-g~~H~~~n~~ 92 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YDT-NETCYILEGKVEVTT----EDG-------------KKYVIEKGDLVTFPK-GLRCRWKVLE 92 (101)
T ss_dssp EEEECSEEE-EEE-CSS-CEEEEEEEEEEEEEE----TTC-------------CEEEEETTCEEEECT-TCEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CCc-eEEEEEEeCEEEEEE----CCC-------------CEEEECCCCEEEECC-CCcEEEEeCC
Confidence 334556654 346 764 567899999998765 111 267899999999886 5699999986
No 112
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=92.67 E-value=0.25 Score=44.54 Aligned_cols=81 Identities=14% Similarity=0.054 Sum_probs=58.6
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
.+++..+...||...++|-|+.+.-|+.|++|+.+............+.++ ... ..-...+.+|||.+++. ..+|-+
T Consensus 280 ~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g-~~~-~~~~~~l~~GdV~vvP~-g~~h~~ 356 (445)
T 2cav_A 280 DILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLES-MQL-RRYAATLSEGDIIVIPS-SFPVAL 356 (445)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC------------CC-EEEEEEECTTCEEEECT-TCCEEE
T ss_pred CCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccC-cce-EEEEeEecCCcEEEEcC-CcEEEE
Confidence 689999999999999999999999999999999999998542110000000 000 12367799999988864 569999
Q ss_pred ecCC
Q psy5204 162 GNSG 165 (209)
Q Consensus 162 ~n~~ 165 (209)
.|.+
T Consensus 357 ~n~~ 360 (445)
T 2cav_A 357 KAAS 360 (445)
T ss_dssp EESS
T ss_pred EcCC
Confidence 8873
No 113
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=92.25 E-value=1.1 Score=35.45 Aligned_cols=82 Identities=16% Similarity=0.190 Sum_probs=52.2
Q ss_pred EccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCC--C---CC-CCCcc-------------c--cccceEEeeCC
Q psy5204 89 CWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTS--D---EI-GQDRP-------------L--SEISRTELAEN 147 (209)
Q Consensus 89 ~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~--~---~~-~~~~~-------------l--~~~~~~~~~~G 147 (209)
.=++|..|+.|.-.. .-++.++.|+=+-..|...+... . .. ..... + ...-+.++.||
T Consensus 130 iG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pG 208 (235)
T 4gjz_A 130 FGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPG 208 (235)
T ss_dssp EECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTT
T ss_pred EeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCC
Confidence 346788999887764 67888999999988885321100 0 00 00000 0 01226789999
Q ss_pred cEEEEcCCCCeEEEecCCCCCceEEEEE
Q psy5204 148 DVCYINDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 148 ~v~~~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
|+.+++. +=.|+|.|.+ .+||+-+
T Consensus 209 D~LyiP~-gW~H~V~~l~---~sisvn~ 232 (235)
T 4gjz_A 209 EILFIPV-KYWHYVRALD---LSFSVSF 232 (235)
T ss_dssp CEEEECT-TCEEEEEESS---SEEEEEE
T ss_pred CEEEeCC-CCcEEEEECC---CEEEEEE
Confidence 9999975 4499999985 4676643
No 114
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=92.14 E-value=0.61 Score=41.08 Aligned_cols=66 Identities=9% Similarity=0.108 Sum_probs=54.0
Q ss_pred CCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeE
Q psy5204 80 DGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLH 159 (209)
Q Consensus 80 ~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH 159 (209)
...+...+...+||..|+.|-|.. ..++.|++|+-..+. ++ .+..+++||++++++ ...|
T Consensus 276 ~pti~~~~~~L~pG~~t~~hRht~-s~Vy~V~eG~G~~~I-----~~-------------~~~~w~~gD~fvvP~-w~~h 335 (368)
T 3nw4_A 276 MPTLRCEFHRLRAGTETATRNEVG-STVFQVFEGAGAVVM-----NG-------------ETTKLEKGDMFVVPS-WVPW 335 (368)
T ss_dssp SSSCEEEEEEECTTCBCCCEEESS-CEEEEEEESCEEEEE-----TT-------------EEEEECTTCEEEECT-TCCE
T ss_pred chhHHhheEEECCCCccCCeeccc-cEEEEEEeCcEEEEE-----CC-------------EEEEecCCCEEEECC-CCcE
Confidence 367888889999999999999996 488999999988665 11 367799999988765 5699
Q ss_pred EEecCC
Q psy5204 160 KVGNSG 165 (209)
Q Consensus 160 ~v~n~~ 165 (209)
+..|.+
T Consensus 336 ~~~n~~ 341 (368)
T 3nw4_A 336 SLQAET 341 (368)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 999863
No 115
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=91.29 E-value=1.5 Score=36.87 Aligned_cols=71 Identities=18% Similarity=0.286 Sum_probs=58.0
Q ss_pred EccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC-eEEEecCCCC
Q psy5204 89 CWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG-LHKVGNSGPH 167 (209)
Q Consensus 89 ~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~-iH~v~n~~~~ 167 (209)
...||..-|.|=|.+..-+-.|++|+++..- .-+ ...++.+|+|-+|....| +|+=.|+. +
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~D----S~G-------------n~~~i~~GdvQwMtAG~GI~HsE~~~~-~ 106 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHFD----SKA-------------GHSTLGPGDVQWMTAGRGVVHKEDPAS-G 106 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEEE----TTT-------------EEEEECTTCEEEEECTTCEEEEEEECT-T
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEee----CCC-------------CceEECCCeEEEEeCCCCEEEEeecCC-C
Confidence 4578899999999999889999999998773 111 467899999999986566 89999986 5
Q ss_pred CceEEEEEeC
Q psy5204 168 PAAVSLHLYS 177 (209)
Q Consensus 168 ~~avSLHvY~ 177 (209)
++.-.|.+.-
T Consensus 107 ~~~~~lQlWv 116 (277)
T 2p17_A 107 STVHSLQLWV 116 (277)
T ss_dssp CCEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 7888888886
No 116
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=90.51 E-value=1.7 Score=39.40 Aligned_cols=96 Identities=9% Similarity=-0.088 Sum_probs=67.5
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCC-CCCCCC-----C------------------------
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPN-HTSDEI-----G------------------------ 131 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~-~~~~~~-----~------------------------ 131 (209)
.+++..+...||...++|-|+ +..++.|++|......-.... ....+. +
T Consensus 42 gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (466)
T 3kgl_A 42 GVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQG 120 (466)
T ss_dssp TEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-----------------------
T ss_pred CeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccccccccccccc
Confidence 799999999999999999998 678999999998776542210 000000 0
Q ss_pred --------C--------CccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCC
Q psy5204 132 --------Q--------DRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 132 --------~--------~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
+ ...-.......+++||+.++++ +.+|-+.|.+ +++.+-|=++-+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPa-G~~~~~~N~g-~e~L~~l~~~d~~n 183 (466)
T 3kgl_A 121 QGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHP-GVAQWFYNDG-NQPLVIVSVLDLAS 183 (466)
T ss_dssp ------------------CCEEESCEEEEETTEEEEECT-TCEEEEECCS-SSCEEEEEEEESSS
T ss_pred ccccccccccccccccccccccceeeccccCCCEEEECC-CCcEEEEeCC-CCcEEEEEEEcCCC
Confidence 0 0001112235889999999976 5699999998 68888888886654
No 117
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=90.34 E-value=0.44 Score=38.95 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=34.5
Q ss_pred cceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEE
Q psy5204 70 RYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLT 116 (209)
Q Consensus 70 ~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~ 116 (209)
.-....|++ ++.=.+.++-|+||..-+.|.|+|.. +-||+|++.
T Consensus 134 Gv~~~~L~~-~~~E~v~l~r~~~G~~~~~~~hgG~E--ilVL~G~~~ 177 (223)
T 3o14_A 134 GISTSLLHE-DERETVTHRKLEPGANLTSEAAGGIE--VLVLDGDVT 177 (223)
T ss_dssp TEEEEEEEE-CSSCEEEEEEECTTCEEEECCSSCEE--EEEEEEEEE
T ss_pred CeEEEEEec-CCCcEEEEEEECCCCccCCCCCCcEE--EEEEEeEEE
Confidence 345667876 44566778899999999999997644 479999987
No 118
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=90.14 E-value=2.4 Score=36.62 Aligned_cols=81 Identities=15% Similarity=0.113 Sum_probs=52.5
Q ss_pred CCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCC-CC-------C-------------CCccccccceEEeeCCcEE
Q psy5204 92 QGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSD-EI-------G-------------QDRPLSEISRTELAENDVC 150 (209)
Q Consensus 92 pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~-~~-------~-------------~~~~l~~~~~~~~~~G~v~ 150 (209)
.|+.++.|--. ...++..+.|+=+-..|..++...+ .+ . .........+.++.|||+.
T Consensus 150 ~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~L 228 (342)
T 1vrb_A 150 NGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTML 228 (342)
T ss_dssp SSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEE
T ss_pred CCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEE
Confidence 59999999876 4688889999999999932221100 00 0 0000133457889999999
Q ss_pred EEcCCCCeEEEecCCCCCceEEEEE
Q psy5204 151 YINDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 151 ~~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
|+++ +-.|.+.+.+ +++++|+=|
T Consensus 229 yiP~-gwwH~v~s~~-~~~slsvsi 251 (342)
T 1vrb_A 229 YLPR-GLWHSTKSDQ-ATLALNITF 251 (342)
T ss_dssp EECT-TCEEEEECSS-CEEEEEEEE
T ss_pred EeCC-CccEEEEECC-CCceEEEEE
Confidence 9976 5599999884 234444433
No 119
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=89.88 E-value=0.38 Score=42.51 Aligned_cols=95 Identities=13% Similarity=0.092 Sum_probs=62.9
Q ss_pred ceEEEEEEccCCCccCCC-CCCCceEEEEEEEeEEEEEEeeCCCCC---------CC---C-CCCCccccccceEEeeCC
Q psy5204 82 KFNLILLCWSQGQASSIH-DHAQAHCFMKMLQGCLTEVRYQEPNHT---------SD---E-IGQDRPLSEISRTELAEN 147 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiH-DH~~s~~~~~vl~G~l~e~~y~~~~~~---------~~---~-~~~~~~l~~~~~~~~~~G 147 (209)
.+..+++.=++|..|+.| |..++..|..++.|.=+-..|-..+.. +. + .-+ ......-+.++.+|
T Consensus 146 ~~~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~-~~~~~~~ev~l~pG 224 (371)
T 3k3o_A 146 NVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFG-DQVDKCYKCSVKQG 224 (371)
T ss_dssp CCSCEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGG-GTSSCCEEEEEETT
T ss_pred CceeEEEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcc-cccCceEEEEECCC
Confidence 444567778999999999 555556789999999888877432110 00 0 000 01223347889999
Q ss_pred cEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 148 DVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 148 ~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
++.+++. +=+|.|.|+. +.-+|+=+.....
T Consensus 225 EtLfIPs-GWwH~V~nle-dSIai~~NFl~~~ 254 (371)
T 3k3o_A 225 QTLFIPT-GWIHAVLTPV-DCLAFGGNFLHSL 254 (371)
T ss_dssp CEEEECT-TCEEEEEEEE-EEEEEEEEECCST
T ss_pred cEEEeCC-CCeEEEecCC-CeEEECCcccchh
Confidence 9988865 3499999996 5667776665544
No 120
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=89.80 E-value=0.86 Score=41.17 Aligned_cols=96 Identities=13% Similarity=0.091 Sum_probs=63.6
Q ss_pred ceEEEEEEccCCCccCCC-CCCCceEEEEEEEeEEEEEEeeCCCCC---------CC---CCCCCccccccceEEeeCCc
Q psy5204 82 KFNLILLCWSQGQASSIH-DHAQAHCFMKMLQGCLTEVRYQEPNHT---------SD---EIGQDRPLSEISRTELAEND 148 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiH-DH~~s~~~~~vl~G~l~e~~y~~~~~~---------~~---~~~~~~~l~~~~~~~~~~G~ 148 (209)
.+..+++.=++|..|+.| |..++..|..++.|.=+-..|-..+.. .. +.--...+...-+.++.+|+
T Consensus 230 ~v~r~~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGe 309 (447)
T 3kv4_A 230 NVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQ 309 (447)
T ss_dssp CCSCEEEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTC
T ss_pred CceeEEEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCc
Confidence 345567778999999999 666667889999999888777432110 00 00000012233477899999
Q ss_pred EEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 149 VCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 149 v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
+.+++. +=+|.|.|+. +.-+|+=+.....
T Consensus 310 tlfIPs-GWwH~V~nle-dsIai~~NF~~~~ 338 (447)
T 3kv4_A 310 TLFIPT-GWIHAVLTPV-DCLAFGGNFLHSL 338 (447)
T ss_dssp EEEECT-TCEEEEEESS-CEEEEEEEECCST
T ss_pred EEecCC-CCeEEEecCC-CEEEEcccccccc
Confidence 988865 3499999996 5566666776554
No 121
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=89.35 E-value=0.59 Score=41.54 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=62.7
Q ss_pred ceEEEEEEccCCCccCCC-CCCCceEEEEEEEeEEEEEEeeCCCCCC---------C---C-CCCCccccccceEEeeCC
Q psy5204 82 KFNLILLCWSQGQASSIH-DHAQAHCFMKMLQGCLTEVRYQEPNHTS---------D---E-IGQDRPLSEISRTELAEN 147 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiH-DH~~s~~~~~vl~G~l~e~~y~~~~~~~---------~---~-~~~~~~l~~~~~~~~~~G 147 (209)
.+.-+++.=+.|..|++| |..++..|..+++|.=+-..|...+... . + .-+ ..+...-+.++.+|
T Consensus 173 ~v~r~~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~-~~~~~~~ev~l~pG 251 (392)
T 3pua_A 173 KVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFA-DQVDKCYKCIVKQG 251 (392)
T ss_dssp SCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGG-GGSSCCEEEEEETT
T ss_pred CceeEEEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhc-ccccceEEEEECCC
Confidence 334566777999999999 6677778999999998887774322100 0 0 000 01223347889999
Q ss_pred cEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 148 DVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 148 ~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
++.+++. +=+|.|.|+. +.-+++=+.....
T Consensus 252 EtlfIPs-GWwH~V~nle-dSIai~gNFl~~~ 281 (392)
T 3pua_A 252 QTLFIPS-GWIYATLTPV-DCLAFAGHFLHSL 281 (392)
T ss_dssp CEEEECT-TCEEEEEEEE-EEEEEEEEECCTT
T ss_pred cEEeeCC-CceEEEecCC-CEEEEcCcccChh
Confidence 9988864 3499999996 4566665655443
No 122
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=88.89 E-value=5.7 Score=31.64 Aligned_cols=69 Identities=12% Similarity=0.034 Sum_probs=50.7
Q ss_pred cCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEE
Q psy5204 96 SSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 96 spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
-+.|-|.. .-++.|++|+..-..=.. ++. ..+..+++||++.+++ +..|+..+.. +.....+.+
T Consensus 97 ~~~H~H~~-~Ei~yVleG~G~f~i~d~--~d~-----------~~~i~v~~GDlIiIPa-G~~H~f~~~~-~~~~~airl 160 (191)
T 1vr3_A 97 FEEHLHLD-EEIRYILEGSGYFDVRDK--EDK-----------WIRISMEKGDMITLPA-GIYHRFTLDE-KNYVKAMRL 160 (191)
T ss_dssp HSCEECSS-CEEEEEEEEEEEEEEECT--TSC-----------EEEEEEETTEEEEECT-TCCEEEEECT-TCCEEEEEE
T ss_pred CcceECCc-ceEEEEEeceEEEEECCC--CCe-----------EEEEEECCCCEEEECc-CCcCCcccCC-CCCEEEEEE
Confidence 48899996 677899999987664211 110 1246789999998876 5699998875 567889999
Q ss_pred eCCCC
Q psy5204 176 YSPPF 180 (209)
Q Consensus 176 Y~pp~ 180 (209)
|.++-
T Consensus 161 F~~~~ 165 (191)
T 1vr3_A 161 FVGEP 165 (191)
T ss_dssp ESSSC
T ss_pred ECCCC
Confidence 98773
No 123
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=88.71 E-value=3.7 Score=30.12 Aligned_cols=62 Identities=6% Similarity=-0.056 Sum_probs=44.7
Q ss_pred CCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCc--eEEEE
Q psy5204 97 SIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPA--AVSLH 174 (209)
Q Consensus 97 piHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~--avSLH 174 (209)
.+|-|. ...++.|++|+.+... ++ ....+++|++..+++ +.+|...+.+.+++ .+.++
T Consensus 32 ~p~~h~-~~~i~~v~~G~~~~~i-----~~-------------~~~~l~~Gd~~~i~p-~~~H~~~~~~~~~~~~~~~i~ 91 (164)
T 2arc_A 32 RPLGMK-GYILNLTIRGQGVVKN-----QG-------------REFVCRPGDILLFPP-GEIHHYGRHPEAREWYHQWVY 91 (164)
T ss_dssp ETTCCS-SEEEEEEEEECEEEEE-----TT-------------EEEEECTTCEEEECT-TCCEEEEECTTSSEEEEEEEE
T ss_pred cccCCC-ceEEEEEEEeEEEEEE-----CC-------------EEEEecCCeEEEEcC-CCCEEEEeCCCCCcEEEEEEE
Confidence 478898 4789999999988765 11 367799999999987 57999987641133 45666
Q ss_pred EeCC
Q psy5204 175 LYSP 178 (209)
Q Consensus 175 vY~p 178 (209)
+-+.
T Consensus 92 f~~~ 95 (164)
T 2arc_A 92 FRPR 95 (164)
T ss_dssp ECCC
T ss_pred ECCh
Confidence 6543
No 124
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=88.37 E-value=4.1 Score=33.77 Aligned_cols=98 Identities=10% Similarity=0.001 Sum_probs=65.8
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEe-EEEEEEeeCCCCCCC-C-------CCCCccccccceEEeeCCcEEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQG-CLTEVRYQEPNHTSD-E-------IGQDRPLSEISRTELAENDVCYI 152 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G-~l~e~~y~~~~~~~~-~-------~~~~~~l~~~~~~~~~~G~v~~~ 152 (209)
.|.-=+|.-.|||.+|.|-|..-.--+-.--| .|..+.|..++++.. + .|....+.+.....|.||+.+.+
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 67777888999999999999965443444444 888999987644221 0 12223355566788999998888
Q ss_pred cCCCCeEEEecCCCCCceEEEEEeCCCC
Q psy5204 153 NDSMGLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 153 ~~~~~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
.| ...|+.......+.++.-=|=...-
T Consensus 185 ~P-g~~H~F~ae~g~G~vligEVSt~ND 211 (246)
T 3kmh_A 185 PP-GLYHSFWAEAGFGDVLVGEVSSVND 211 (246)
T ss_dssp CT-TEEEEEEECTTSCCEEEEEEEECCC
T ss_pred CC-CCEEEEEecCCCccEEEEEcccCcC
Confidence 87 5699998765223466555544443
No 125
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=88.28 E-value=3.4 Score=35.71 Aligned_cols=91 Identities=16% Similarity=0.204 Sum_probs=60.8
Q ss_pred EEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCC-------------C---C--CCCC-CCcc-c--cccceEEe
Q psy5204 87 LLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNH-------------T---S--DEIG-QDRP-L--SEISRTEL 144 (209)
Q Consensus 87 ~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~-------------~---~--~~~~-~~~~-l--~~~~~~~~ 144 (209)
+..=++|..|+.|-... ..|..++.|.=+-..|...+. + . ..+. ..-+ + ...-+.++
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 34457889999998875 788999999998888753210 0 0 0000 0000 1 12347889
Q ss_pred eCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 145 AENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 145 ~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
.|||+.+++. +=.|.+.|.+++..+||+.+..+.
T Consensus 266 ~pGD~LyiP~-gWwH~V~~l~d~~~sisvn~w~~~ 299 (349)
T 3d8c_A 266 GPGDVLYIPM-YWWHHIESLLNGGITITVNFWYKG 299 (349)
T ss_dssp CTTCEEEECT-TCEEEEEECTTSCCEEEEEEEEEC
T ss_pred CCCCEEEECC-CCcEEEEEcCCCCcEEEEEEEcCC
Confidence 9999999975 459999998633679999876544
No 126
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=87.71 E-value=1.8 Score=39.39 Aligned_cols=95 Identities=12% Similarity=0.026 Sum_probs=61.3
Q ss_pred eEEEEEEccCCCccCCCCCCC-ceEEEEEEEeEEEEEEeeCCCCC---------CC---CCCCCccccccceEEeeCCcE
Q psy5204 83 FNLILLCWSQGQASSIHDHAQ-AHCFMKMLQGCLTEVRYQEPNHT---------SD---EIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 83 ~~l~~~~W~pG~~spiHDH~~-s~~~~~vl~G~l~e~~y~~~~~~---------~~---~~~~~~~l~~~~~~~~~~G~v 149 (209)
+.-+++.=++|..|+.|-..+ +..|..++.|.=+-..|-..+.. .. +.-........-+.++.+||+
T Consensus 266 ~~r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~ 345 (488)
T 3kv5_D 266 VQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHT 345 (488)
T ss_dssp CSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCE
T ss_pred cceEEEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCE
Confidence 344677779999999997654 45788999999888887432110 00 000000122334778999999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
.+++. +=+|.|.|+. +.-+|+-+.....
T Consensus 346 lfIPs-GWwH~V~nle-dsIai~~NF~~~~ 373 (488)
T 3kv5_D 346 LFVPT-GWIHAVLTSQ-DCMAFGGNFLHNL 373 (488)
T ss_dssp EEECT-TCEEEEEEEE-EEEEEEEEECCST
T ss_pred EEeCC-CceEEeeCCC-CeEEEccccCCcc
Confidence 88865 3499999996 4556665665444
No 127
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=87.54 E-value=1.3 Score=35.04 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=49.5
Q ss_pred ceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEE
Q psy5204 82 KFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKV 161 (209)
Q Consensus 82 ~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v 161 (209)
..-+++..+.|+++...|.|+ +.-+..||+|.+.-..-.. + ......+++||...++. +--|+-
T Consensus 34 ~~~~V~~v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~---g-----------~~~~v~l~eGE~f~lP~-gvpH~P 97 (174)
T 1yfu_A 34 SDFIVTVVGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD---G-----------RRERADLKEGDIFLLPP-HVRHSP 97 (174)
T ss_dssp CSEEEEEECSCBCCCCEEECS-SCEEEEEEESCEEEEEEET---T-----------EEEEEEECTTCEEEECT-TCCEEE
T ss_pred CcEEEEEEcCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC---C-----------ceeeEEECCCCEEEeCC-CCCcCc
Confidence 334445589999999999886 5789999999998876421 1 12478899999877764 569987
Q ss_pred ecC
Q psy5204 162 GNS 164 (209)
Q Consensus 162 ~n~ 164 (209)
...
T Consensus 98 ~r~ 100 (174)
T 1yfu_A 98 QRP 100 (174)
T ss_dssp EBC
T ss_pred ccc
Confidence 544
No 128
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=87.45 E-value=1.4 Score=39.30 Aligned_cols=82 Identities=13% Similarity=0.042 Sum_probs=56.0
Q ss_pred eEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCC---CC--CCCCCc------cc-cccceEEeeCCcEE
Q psy5204 83 FNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHT---SD--EIGQDR------PL-SEISRTELAENDVC 150 (209)
Q Consensus 83 ~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~---~~--~~~~~~------~l-~~~~~~~~~~G~v~ 150 (209)
+++..+...||.-.++|-|+++.-++.|++|+.+.......... .. +-+... .- ...-...+.+|||.
T Consensus 263 is~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~ 342 (418)
T 3s7i_A 263 MMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVF 342 (418)
T ss_dssp CEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEE
T ss_pred eeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEE
Confidence 69999999999999999999899999999999998887421100 00 000000 00 01125778999998
Q ss_pred EEcCCCCeEEEecCC
Q psy5204 151 YINDSMGLHKVGNSG 165 (209)
Q Consensus 151 ~~~~~~~iH~v~n~~ 165 (209)
.++. ..+|-..|.+
T Consensus 343 vvP~-G~~~~~~~~~ 356 (418)
T 3s7i_A 343 IMPA-AHPVAINASS 356 (418)
T ss_dssp EECT-TCCEEEEESS
T ss_pred EECC-CCEEEEECCC
Confidence 8875 5588877753
No 129
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=87.05 E-value=1.5 Score=37.27 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=56.9
Q ss_pred EccCCCccCCCCCCCceEEEEEE-EeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCC-eEEEecCCC
Q psy5204 89 CWSQGQASSIHDHAQAHCFMKML-QGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMG-LHKVGNSGP 166 (209)
Q Consensus 89 ~W~pG~~spiHDH~~s~~~~~vl-~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~-iH~v~n~~~ 166 (209)
...||..-|.|=|.+..-+-.|+ +|+++..- .-+ ...++.+|+|-+|....| +|+=.|.+
T Consensus 46 ~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~D----S~G-------------n~~~i~~GdvQwMtAG~GI~HsE~~~~- 107 (290)
T 1j1l_A 46 KGGRPGGFPDHPHRGFETVSYLLEGGSMAHED----FCG-------------HTGKMNPGDLQWMTAGRGILHAEMPCS- 107 (290)
T ss_dssp EECTTCBEEEEEEBSEEEEEEECSSSCEEEEE----TTS-------------CEEEECTTCEEEEECTTCEEEEEEECS-
T ss_pred ccCCCCCCCCCCCCCeEEEEEECcceEEEEee----CCC-------------CceEECCCcEEEEeCCCCEEEEeEcCC-
Confidence 45688888999999988888999 99999773 112 367899999999986566 89988885
Q ss_pred CCceEEEEEeC
Q psy5204 167 HPAAVSLHLYS 177 (209)
Q Consensus 167 ~~~avSLHvY~ 177 (209)
+++.-.|.+.-
T Consensus 108 ~~~~~~lQlWv 118 (290)
T 1j1l_A 108 EEPAHGLQLWV 118 (290)
T ss_dssp SSCEEEEEEEE
T ss_pred CCCEEEEEEEe
Confidence 57888888885
No 130
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=86.54 E-value=5 Score=30.52 Aligned_cols=86 Identities=9% Similarity=0.052 Sum_probs=62.3
Q ss_pred cCCccceEEeeecCCCceEEEEEEccCC----CccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccce
Q psy5204 66 FDENRYTRNLVDEGDGKFNLILLCWSQG----QASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISR 141 (209)
Q Consensus 66 ~~~~~Y~R~ll~~~~~~~~l~~~~W~pG----~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~ 141 (209)
++.++|.+.+. ++..-|..+.|.|. +....|.|..+-=++.||+|+++-..=...+.. ...+.
T Consensus 11 ~~~eGy~~~~~---~~~W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~----------~~d~~ 77 (140)
T 3d0j_A 11 NNREGILCVYK---NEKWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDK----------FNIEL 77 (140)
T ss_dssp CCSSSEEEEEE---CSSEEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTE----------EEEEE
T ss_pred ccCCceeEEEE---cCCEEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCC----------Cccce
Confidence 45567877554 57899999999886 678889999888999999999987763322111 12256
Q ss_pred EEeeCCcEEEEcCCCCeEEEecCC
Q psy5204 142 TELAENDVCYINDSMGLHKVGNSG 165 (209)
Q Consensus 142 ~~~~~G~v~~~~~~~~iH~v~n~~ 165 (209)
..+++|+...++ .+--|+.....
T Consensus 78 V~l~~Ge~yvVP-kGveH~p~a~~ 100 (140)
T 3d0j_A 78 TLMEKGKVYNVP-AECWFYSITQK 100 (140)
T ss_dssp EECCTTCCEEEC-TTCEEEEEECT
T ss_pred EEecCCCEEEeC-CCccCcccCCC
Confidence 889999976654 45699887653
No 131
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=86.25 E-value=0.67 Score=31.75 Aligned_cols=40 Identities=15% Similarity=0.011 Sum_probs=36.2
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEe
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRY 120 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y 120 (209)
=..++..+...||...++|-|..+.-++.|++|+.....-
T Consensus 34 lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V 73 (79)
T 1dgw_X 34 LDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELV 73 (79)
T ss_dssp TTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEE
T ss_pred CCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEe
Confidence 4679999999999999999999999999999999887763
No 132
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=84.39 E-value=6.6 Score=29.65 Aligned_cols=79 Identities=15% Similarity=0.184 Sum_probs=58.2
Q ss_pred EEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcE-EEEcCCCCeEEEecCC
Q psy5204 87 LLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDV-CYINDSMGLHKVGNSG 165 (209)
Q Consensus 87 ~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v-~~~~~~~~iH~v~n~~ 165 (209)
+..-+||..-..|-|..++=++.+++|.++...++ +. ...+..+..... .++++ +-.|.+.+-+
T Consensus 39 ~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldD----g~----------~~~~~~L~~~~~gL~Ipp-gvWh~~~~~s 103 (141)
T 2pa7_A 39 IFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDD----GN----------IIQEITLDSPAVGLYVGP-AVWHEMHDFS 103 (141)
T ss_dssp EESCCSSCCEEEEEESSCCEEEEEEESCEEEEEEC----SS----------CEEEEEECCTTEEEEECT-TCEEEEECCC
T ss_pred EEecCCCCEECcCcCCCceEEEEEEccEEEEEEEC----Cc----------EEEEEEECCCCcEEEeCC-CEEEEEEEcC
Confidence 33456999999999999999999999999999953 21 124566665554 44554 6799999997
Q ss_pred CCCceEEEEEeCCCCCc
Q psy5204 166 PHPAAVSLHLYSPPFNI 182 (209)
Q Consensus 166 ~~~~avSLHvY~pp~~~ 182 (209)
. .||-|=+=+.|+..
T Consensus 104 ~--~avllvlas~~Yd~ 118 (141)
T 2pa7_A 104 S--DCVMMVLASDYYDE 118 (141)
T ss_dssp T--TCEEEEEESSCCCG
T ss_pred C--CeEEEEECCCCcCH
Confidence 3 48888887777653
No 133
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=83.84 E-value=12 Score=30.78 Aligned_cols=76 Identities=12% Similarity=0.044 Sum_probs=49.6
Q ss_pred cCCccceEEeeecCCCceEEEEEEccCCCccC-CCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEe
Q psy5204 66 FDENRYTRNLVDEGDGKFNLILLCWSQGQASS-IHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTEL 144 (209)
Q Consensus 66 ~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~sp-iHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~ 144 (209)
-||.-..|.++.++.+.+++-++.| .|.... -+.|. =+..||+|+++.+. ++ ....+
T Consensus 30 ~dp~~~~r~~~~~~~~~~~~G~~~~-~g~~~v~~~p~d---E~~~VleG~~~lt~-----~g-------------~~~~~ 87 (238)
T 3myx_A 30 HDPFDSGRRTAFVDEQGIAAGIVEF-GTALSVEAYPYT---EMLVMHRGSVTLTS-----GT-------------DSVTL 87 (238)
T ss_dssp TCSCSTTEEEEEECTTSEEEEEEEE-CSEEEESSCSSE---EEEEEEESEEEEEE-----TT-------------EEEEE
T ss_pred CCccccceEEecCCCCCeEEEEEEe-ccccccccCCCc---EEEEEEEeEEEEEC-----CC-------------eEEEE
Confidence 3455567777777779999999999 777665 34443 34569999999885 11 24557
Q ss_pred eCCcEEEEcCCCCeEEEecC
Q psy5204 145 AENDVCYINDSMGLHKVGNS 164 (209)
Q Consensus 145 ~~G~v~~~~~~~~iH~v~n~ 164 (209)
++||+.++.. +.-|+....
T Consensus 88 ~~Gd~~~ip~-G~~~~w~~~ 106 (238)
T 3myx_A 88 STGESAVIGR-GTQVRIDAQ 106 (238)
T ss_dssp ETTCEEEECT-TCCEEEEEC
T ss_pred cCCCEEEECC-CCEEEEEec
Confidence 7777666643 234444433
No 134
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=83.02 E-value=4.3 Score=32.05 Aligned_cols=75 Identities=9% Similarity=0.069 Sum_probs=52.2
Q ss_pred EeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEc
Q psy5204 74 NLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYIN 153 (209)
Q Consensus 74 ~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~ 153 (209)
++|++ + . -++..++.|++++..|.|+ +.-+..+++|.+.-..-.. +.. + .......+++||...++
T Consensus 28 k~v~~-~-~-~~V~~vgGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~---g~~-----~--~~~~dv~i~eGdmfllP 93 (176)
T 1zvf_A 28 YCLHK-G-G-FTVMIVGGPNERTDYHINP-TPEWFYQKKGSMLLKVVDE---TDA-----E--PKFIDIIINEGDSYLLP 93 (176)
T ss_dssp EEEEC-S-S-EEEEEECSSBCCSCEEECS-SCEEEEEEESCEEEEEEEC---SSS-----S--CEEEEEEECTTEEEEEC
T ss_pred EEEec-C-C-EEEEEEcCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcC---CCc-----c--cceeeEEECCCCEEEcC
Confidence 56665 3 3 3444578899999999665 6889999999999887531 211 0 12347889999987776
Q ss_pred CCCCeEEEec
Q psy5204 154 DSMGLHKVGN 163 (209)
Q Consensus 154 ~~~~iH~v~n 163 (209)
+ +--|+-..
T Consensus 94 ~-gvpHsP~r 102 (176)
T 1zvf_A 94 G-NVPHSPVR 102 (176)
T ss_dssp T-TCCEEEEE
T ss_pred C-CCCcCCcc
Confidence 4 56898743
No 135
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=82.37 E-value=12 Score=33.60 Aligned_cols=81 Identities=19% Similarity=0.226 Sum_probs=51.1
Q ss_pred cCCCcc-CCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCC--CC-CCccccccceEEeeCCcEEEEcCCCCeEEEecCCC
Q psy5204 91 SQGQAS-SIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDE--IG-QDRPLSEISRTELAENDVCYINDSMGLHKVGNSGP 166 (209)
Q Consensus 91 ~pG~~s-piHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~--~~-~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~ 166 (209)
++|..+ ++|--. ...++..+.|+=+-+.|.....-... .. .........+.++.|||+.|+++ +-+|.+.+.+
T Consensus 147 ~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~-g~~H~~~s~~- 223 (442)
T 2xdv_A 147 PAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPR-GTIHQADTPA- 223 (442)
T ss_dssp CTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECT-TCEEEEECCS-
T ss_pred CCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECC-CceEEEEecC-
Confidence 456555 788755 46788899999888888643211000 00 00001233478899999999976 5599999874
Q ss_pred CCceEEEEE
Q psy5204 167 HPAAVSLHL 175 (209)
Q Consensus 167 ~~~avSLHv 175 (209)
+.+.|+|+
T Consensus 224 -~~~~Slhl 231 (442)
T 2xdv_A 224 -GLAHSTHV 231 (442)
T ss_dssp -SSCCEEEE
T ss_pred -CCcceeec
Confidence 34566665
No 136
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=81.54 E-value=2.5 Score=37.59 Aligned_cols=95 Identities=12% Similarity=0.026 Sum_probs=60.7
Q ss_pred eEEEEEEccCCCccCCCCCCC-ceEEEEEEEeEEEEEEeeCCCCC---------CC---CCCCCccccccceEEeeCCcE
Q psy5204 83 FNLILLCWSQGQASSIHDHAQ-AHCFMKMLQGCLTEVRYQEPNHT---------SD---EIGQDRPLSEISRTELAENDV 149 (209)
Q Consensus 83 ~~l~~~~W~pG~~spiHDH~~-s~~~~~vl~G~l~e~~y~~~~~~---------~~---~~~~~~~l~~~~~~~~~~G~v 149 (209)
+.-+++.=+.|..|++|-..+ +..|..++.|.=+-..|...+.. .. +.--.......-+.++.+|++
T Consensus 175 v~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~ 254 (397)
T 3kv9_A 175 VQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHT 254 (397)
T ss_dssp CSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCE
T ss_pred ceeEEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCE
Confidence 344666678999999997764 45688999999888887532110 00 000000112334678999999
Q ss_pred EEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 150 CYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 150 ~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
.+++. +=+|.|.|+. +.-+|+=+.....
T Consensus 255 lfIPs-GW~H~V~nle-dSIai~~NFl~~~ 282 (397)
T 3kv9_A 255 LFVPT-GWIHAVLTSQ-DCMAFGGNFLHNL 282 (397)
T ss_dssp EEECT-TCEEEEEEEE-EEEEEEEEECCST
T ss_pred EEeCC-CCeEEccCCc-CeEEECCcccCch
Confidence 88865 4499999995 4455554655444
No 137
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=80.18 E-value=2 Score=33.90 Aligned_cols=67 Identities=12% Similarity=0.144 Sum_probs=48.0
Q ss_pred cCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEE
Q psy5204 96 SSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHL 175 (209)
Q Consensus 96 spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHv 175 (209)
-+.|-|.. .-+..|++|+..-..- .++. .-...+++||++.+++ +..|+..+.+ +.....+.+
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~--~~d~------------~~~~~l~~GDli~IP~-g~~H~~~~~~-~~~~~~ir~ 155 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH--IGDE------------VFQVLCEKNDLISVPA-HTPHWFDMGS-EPNFTAIRI 155 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE--CSSC------------EEEEECCCSCEEEECT-TCCBCCCCSS-CSSCEEEEE
T ss_pred ccceECCh-heEEEEEcceEEEEEE--eCCE------------EEEEEECCCCEEEECC-CCeEeeecCC-CceEEEEEe
Confidence 57899996 6778899998654321 1110 0135689999998876 5699998765 457888999
Q ss_pred eCCC
Q psy5204 176 YSPP 179 (209)
Q Consensus 176 Y~pp 179 (209)
+.++
T Consensus 156 F~~~ 159 (179)
T 1zrr_A 156 FDNP 159 (179)
T ss_dssp ECCG
T ss_pred ccCC
Confidence 9877
No 138
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=75.80 E-value=9.8 Score=32.77 Aligned_cols=92 Identities=13% Similarity=0.108 Sum_probs=58.9
Q ss_pred EEEEEccCCCccCCCCCCCc-eEEEEEEEeEEEEEEeeCCCCCC--CCC---CC---Cc---------c---------cc
Q psy5204 85 LILLCWSQGQASSIHDHAQA-HCFMKMLQGCLTEVRYQEPNHTS--DEI---GQ---DR---------P---------LS 137 (209)
Q Consensus 85 l~~~~W~pG~~spiHDH~~s-~~~~~vl~G~l~e~~y~~~~~~~--~~~---~~---~~---------~---------l~ 137 (209)
++++.=++|..|+.|-+... ..|..++.|.=+-..|....... ..+ ++ .. + ..
T Consensus 174 ~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~ 253 (336)
T 3k2o_A 174 RWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEF 253 (336)
T ss_dssp EEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGG
T ss_pred eEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccC
Confidence 45555678899999988864 36899999998888875322100 000 00 00 0 01
Q ss_pred ccceEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCC
Q psy5204 138 EISRTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSP 178 (209)
Q Consensus 138 ~~~~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~p 178 (209)
..-+.++.+||+.+++. +-+|.+.|.. +.-+|+.....+
T Consensus 254 ~~~~~~l~pGd~l~iP~-gw~H~v~~~~-~sisv~~~f~~~ 292 (336)
T 3k2o_A 254 KPLEILQKPGETVFVPG-GWWHVVLNLD-TTIAITQNFASS 292 (336)
T ss_dssp CCEEEEECTTCEEEECT-TCEEEEEESS-CEEEEEEEECCT
T ss_pred ceEEEEECCCCEEEeCC-CCcEEEecCC-CeEEEEcccCCc
Confidence 22367899999999875 4599999996 455555555444
No 139
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=74.42 E-value=46 Score=30.25 Aligned_cols=77 Identities=16% Similarity=0.101 Sum_probs=48.3
Q ss_pred EEEccCCCc-cCCCCCCCceEEEEEEEeEEEEEEeeCCCCCC--C-CC-CC---CccccccceEEeeCCcEEEEcCCCCe
Q psy5204 87 LLCWSQGQA-SSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTS--D-EI-GQ---DRPLSEISRTELAENDVCYINDSMGL 158 (209)
Q Consensus 87 ~~~W~pG~~-spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~--~-~~-~~---~~~l~~~~~~~~~~G~v~~~~~~~~i 158 (209)
+..=++|.. .++|-=. ...++.-+.|+=+-+.|...+... + .. .. .....+.-+.++.|||+.|+++ .-+
T Consensus 168 ~Y~tp~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~-g~~ 245 (489)
T 4diq_A 168 VYLTPPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPR-GFI 245 (489)
T ss_dssp EEEECSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECT-TCE
T ss_pred EEecCCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECC-CCc
Confidence 333345544 4788666 467888899998888886432210 0 00 00 0001233478999999999976 469
Q ss_pred EEEecCC
Q psy5204 159 HKVGNSG 165 (209)
Q Consensus 159 H~v~n~~ 165 (209)
|.+.+.+
T Consensus 246 H~~~s~~ 252 (489)
T 4diq_A 246 HQAECQD 252 (489)
T ss_dssp EEEEBCS
T ss_pred eEEEecC
Confidence 9999985
No 140
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=74.00 E-value=16 Score=33.63 Aligned_cols=38 Identities=8% Similarity=-0.106 Sum_probs=33.2
Q ss_pred CceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEE
Q psy5204 81 GKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVR 119 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~ 119 (209)
-.+++.-+...||-..++|-|+ +.-++.|++|....-+
T Consensus 46 ~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~ 83 (531)
T 3fz3_A 46 AGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGA 83 (531)
T ss_dssp HTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEE
T ss_pred CcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEE
Confidence 5678888999999999999998 6789999999987654
No 141
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=73.70 E-value=13 Score=27.06 Aligned_cols=66 Identities=8% Similarity=0.077 Sum_probs=46.1
Q ss_pred cceEEeee-cCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCc
Q psy5204 70 RYTRNLVD-EGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAEND 148 (209)
Q Consensus 70 ~Y~R~ll~-~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~ 148 (209)
.|.|.+.. .+++.+..-+-.-.||...-..+ .. .=++.+|+|..+.+. +++ ....+++||
T Consensus 28 ~~~~~~~~~~~~g~~~~GvWe~tPG~~~~~~~-~~-~E~~~iLeG~~~lt~----ddG-------------~~~~l~aGD 88 (116)
T 3es4_A 28 SYRRQIWQDDVENGTIVAVWMAEPGIYNYAGR-DL-EETFVVVEGEALYSQ----ADA-------------DPVKIGPGS 88 (116)
T ss_dssp EEEEEEEECSSSSCCEEEEEEECSEEEEECCC-SE-EEEEEEEECCEEEEE----TTC-------------CCEEECTTE
T ss_pred cceEEEEeeCCCCCEEEEEEecCCceeECeeC-CC-cEEEEEEEeEEEEEe----CCC-------------eEEEECCCC
Confidence 47777665 35788888888888997765543 31 256679999999874 222 256788999
Q ss_pred EEEEcC
Q psy5204 149 VCYIND 154 (209)
Q Consensus 149 v~~~~~ 154 (209)
+..|.+
T Consensus 89 ~~~~P~ 94 (116)
T 3es4_A 89 IVSIAK 94 (116)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 888764
No 142
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=73.65 E-value=13 Score=30.61 Aligned_cols=81 Identities=10% Similarity=0.077 Sum_probs=53.5
Q ss_pred hhccCCccceEEeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceE
Q psy5204 63 YAQFDENRYTRNLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRT 142 (209)
Q Consensus 63 ~~~~~~~~Y~R~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~ 142 (209)
....+|...+.++...+++.++.-+..-.||..-+.+-+. +=++.||+|+.+.+. +++ ...
T Consensus 147 ~l~G~P~~~~~~~~~~~~g~~~~GiW~~tpG~~~~~~~~~--~E~~~ILeG~v~lt~----~~G-------------~~~ 207 (238)
T 3myx_A 147 MISPLPQCRSNNLFEDTASTLRIGVWDSTPYERISRPHKI--HELMNLIEGRVVLSL----ENG-------------SSL 207 (238)
T ss_dssp BSSCCCCEEEEEEEECSSSSCEEEEEEECCEEBCCEECSS--CEEEEEEECCEEEEE----TTS-------------CEE
T ss_pred eecCCchheeeEEEECCCCCEEEeEEEeCCCEEECCcCCC--CEEEEEEEeEEEEEe----CCC-------------CEE
Confidence 3445666566665544678899998888998865543233 346779999999874 222 257
Q ss_pred EeeCCcEEEEcCC-CCeEEEe
Q psy5204 143 ELAENDVCYINDS-MGLHKVG 162 (209)
Q Consensus 143 ~~~~G~v~~~~~~-~~iH~v~ 162 (209)
.+++||+..|... .+.+.+.
T Consensus 208 ~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 208 TVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp EECTTCEEEECTTCEEEEEES
T ss_pred EECCCCEEEECCCCEEEEEEC
Confidence 7999999888652 2255543
No 143
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=72.71 E-value=34 Score=29.09 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=56.0
Q ss_pred EEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCC-------------CCCCCC--CCcccc--ccceEEeeCCc
Q psy5204 86 ILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNH-------------TSDEIG--QDRPLS--EISRTELAEND 148 (209)
Q Consensus 86 ~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~-------------~~~~~~--~~~~l~--~~~~~~~~~G~ 148 (209)
++..=++|..++.|--.. ..++.++.|.=+-..|...+. ....+. ..-.+. ..-+.++.|||
T Consensus 170 ~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 333446788899998774 678889999998888853210 000000 000011 13478899999
Q ss_pred EEEEcCCCCeEEEecCCCCCceEEEEEeC
Q psy5204 149 VCYINDSMGLHKVGNSGPHPAAVSLHLYS 177 (209)
Q Consensus 149 v~~~~~~~~iH~v~n~~~~~~avSLHvY~ 177 (209)
+.+++. +-.|.+.|.+ .+||+.++-
T Consensus 249 ~LyiP~-gWwH~v~~l~---~sisvn~~~ 273 (338)
T 3al5_A 249 VLFIPA-LWFHNVISEE---FGVGVNIFW 273 (338)
T ss_dssp EEEECT-TCEEEEEESS---CEEEEEEEE
T ss_pred EEEECC-CCeEEEeeCC---CEEEEEEEe
Confidence 999975 4599999984 566776543
No 144
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=65.16 E-value=11 Score=30.20 Aligned_cols=83 Identities=13% Similarity=0.178 Sum_probs=54.5
Q ss_pred EEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCcccccc-ceEEeeCCcEEEEcCCCCeEEEe
Q psy5204 84 NLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEI-SRTELAENDVCYINDSMGLHKVG 162 (209)
Q Consensus 84 ~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~-~~~~~~~G~v~~~~~~~~iH~v~ 162 (209)
++.+....||...++|-.+ +.+.+.+.-|-... +++ +.+... ......+|++..|++ .-.|.+.
T Consensus 103 ~a~fs~L~pG~~I~pH~g~-~n~~lR~HL~L~~p------~~~-------~~i~V~~~~~~w~eGe~~~fDd-s~~Hev~ 167 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGP-TNCRLRMHLGLVIP------KEG-------CKIRCANETKTWEEGKVLIFDD-SFEHEVW 167 (197)
T ss_dssp EEEEEEECTTEEEEEECCS-CTTEEEEEEEEECC------SSS-------EEEEETTEEECCCBTCEEEECT-TSCEEEE
T ss_pred eEEEEEeCCCCCcCCeeCC-CCCeEEEEEEEEeC------CCC-------cEEEECCEEEEeeCCcEEEEcC-CeEEEEE
Confidence 6899999999999999887 45655554443321 111 113222 245678999988887 4699999
Q ss_pred cCCCC-CceEEEEEeCCCCC
Q psy5204 163 NSGPH-PAAVSLHLYSPPFN 181 (209)
Q Consensus 163 n~~~~-~~avSLHvY~pp~~ 181 (209)
|.++. ...+.+.++=|.++
T Consensus 168 N~~d~~RvvL~~D~~rPdl~ 187 (197)
T 3rcq_A 168 QDASSFRLIFIVDVWHPELT 187 (197)
T ss_dssp ECSSSCEEEEEEEEECTTSC
T ss_pred ECCCCCEEEEEEeeeCCCCC
Confidence 98742 23556666666654
No 145
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=60.56 E-value=17 Score=33.38 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=62.7
Q ss_pred CceEEEEEEccCCCccCCCCC-CCceEEEEEEEeEEEEEEeeCCCCC------------CCCCCCCcccc-ccceEEeeC
Q psy5204 81 GKFNLILLCWSQGQASSIHDH-AQAHCFMKMLQGCLTEVRYQEPNHT------------SDEIGQDRPLS-EISRTELAE 146 (209)
Q Consensus 81 ~~~~l~~~~W~pG~~spiHDH-~~s~~~~~vl~G~l~e~~y~~~~~~------------~~~~~~~~~l~-~~~~~~~~~ 146 (209)
+.+.-+++.=+.|..|.+|-- +++..|+.|++|.-.-..|...+.. ...+-+ ..+. .....++.|
T Consensus 294 P~v~rf~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfg-d~l~~~~~~v~l~p 372 (528)
T 3pur_A 294 PKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFG-DIANGAVKRVVIKE 372 (528)
T ss_dssp CCCSSEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGG-GGTTTCCEEEEEET
T ss_pred CCeeEEEEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhc-ccccccEEEEEECC
Confidence 455667777899999999966 4456889999999887776432110 000000 0011 123578999
Q ss_pred CcEEEEcCCCCeEEEecCCCCCceEEEEEeCCC
Q psy5204 147 NDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPP 179 (209)
Q Consensus 147 G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp 179 (209)
|++.+++. +=+|.|-|+. +.-+++=+.....
T Consensus 373 GEtlfIPs-GW~HaV~tle-DSIaiggNFl~~~ 403 (528)
T 3pur_A 373 GQTLLIPA-GWIHAVLTPV-DSLVFGGNFLHLG 403 (528)
T ss_dssp TCEEEECT-TCEEEEEEEE-EEEEEEEEECCGG
T ss_pred CCEEEecC-CceEEEecCC-CeEEEcCcccchh
Confidence 99988864 4499999996 5667766665443
No 146
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=60.33 E-value=24 Score=28.25 Aligned_cols=50 Identities=4% Similarity=0.005 Sum_probs=35.5
Q ss_pred CCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEcCCCCeEEEecC
Q psy5204 97 SIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYINDSMGLHKVGNS 164 (209)
Q Consensus 97 piHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~~~~~iH~v~n~ 164 (209)
+.|-|. .+.++.|++|... ..- +. ......+.+|+++.++| +.+|++...
T Consensus 23 ~~~~~~-~~~i~~v~~G~~~-~i~-----~~----------~~~~~~l~~g~l~~i~p-~~~h~~~~~ 72 (276)
T 3gbg_A 23 NNLYIN-DYKMFWIDSGIAK-LID-----KN----------CLVSYEINSSSIILLKK-NSIQRFSLT 72 (276)
T ss_dssp EEEECS-SCEEEEESSSCEE-EEE-----TT----------TTEEEEECTTEEEEECT-TCEEEEEEE
T ss_pred cHhhhc-ceEEEEEecCceE-EEC-----Cc----------cceeEEEcCCCEEEEcC-CCceeeccc
Confidence 457777 4788999999988 541 10 00156789999999887 579998765
No 147
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=56.05 E-value=34 Score=23.31 Aligned_cols=63 Identities=10% Similarity=0.152 Sum_probs=44.2
Q ss_pred hhhhhhhhhccCCchhHHHHHHHHHHHHhcCCC--------CCCHHHHHHHHHHhhcCccch-hhhhccCCccc
Q psy5204 7 KINRVEHYLLRLTRIDTLSELIHRVYAAFEGRS--------SVDVAHVKFLMESYVSNADDW-KRYAQFDENRY 71 (209)
Q Consensus 7 ~~~r~~~~~~~~~~~~~l~~li~~l~~~~~~~~--------~~~~~~v~~ll~~l~~~~~~w-~~~~~~~~~~Y 71 (209)
=+|+++.-..+ .|.--++|++.++.--.+.. ..+..+|...++.|..+..|+ ..|..|-|..|
T Consensus 13 yv~kVK~rF~~--~p~~Y~~FL~il~~yk~~~~d~~~~~~~~~s~~eV~~~V~~Lf~~hpDLl~~F~~FLP~~~ 84 (85)
T 1e91_A 13 YVNKIKTRFLD--HPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAK 84 (85)
T ss_dssp HHHHHHHHTSS--CHHHHHHHHHHHHHHHHTTCSSSCCCSSCCCHHHHHHHHHHHTSSCHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHhc--ChHHHHHHHHHHHHHHHccccccccccccCcHHHHHHHHHHHHccCHHHHHHHHHHCcCcc
Confidence 36777765544 56777899999987554431 146788999999999875555 47888877665
No 148
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=54.63 E-value=54 Score=26.00 Aligned_cols=23 Identities=13% Similarity=0.180 Sum_probs=19.8
Q ss_pred eEEEEEEccCCCccCCCCCCCce
Q psy5204 83 FNLILLCWSQGQASSIHDHAQAH 105 (209)
Q Consensus 83 ~~l~~~~W~pG~~spiHDH~~s~ 105 (209)
.+.|...-.+|..-..|.|++++
T Consensus 103 ~~~W~~~~~~G~~~~~H~H~~~~ 125 (216)
T 2rg4_A 103 EDIWINILPEGGVHGSHIHPHSV 125 (216)
T ss_dssp EEEEEEEECTTCCEEEECCTTCS
T ss_pred eeEEEEEcCCCCcccCccCCCCe
Confidence 46888999999999999998653
No 149
>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}
Probab=52.30 E-value=49 Score=22.02 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=44.4
Q ss_pred hhhhhhhhhccCCchhHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCccch-hhhhccCCccce
Q psy5204 7 KINRVEHYLLRLTRIDTLSELIHRVYAAFEGRSSVDVAHVKFLMESYVSNADDW-KRYAQFDENRYT 72 (209)
Q Consensus 7 ~~~r~~~~~~~~~~~~~l~~li~~l~~~~~~~~~~~~~~v~~ll~~l~~~~~~w-~~~~~~~~~~Y~ 72 (209)
=+|+++.-..+ .+..-++|++.++..-.+ ..+...+.+.++.|..+..++ ..|..|-|..|.
T Consensus 10 yl~~VK~~F~~--~p~~Y~~FL~im~~~k~~--~~~~~~v~~rv~~Lf~~hpdLi~gFn~FLP~~~~ 72 (77)
T 2czy_A 10 YLDQVKIRFGS--DPATYNGFLEIMKEFKSQ--SIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYR 72 (77)
T ss_dssp HHHHHHHHTTT--CHHHHHHHHHHHHHHHTT--CSCHHHHHHHHHHHTTTCHHHHHHHHTTSCSSSC
T ss_pred HHHHHHHHHcc--ChHHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHcCCHHHHHHHHHHCCCCce
Confidence 35677755533 577888999988875444 578888888898888874444 588888777653
No 150
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=49.56 E-value=48 Score=22.26 Aligned_cols=62 Identities=13% Similarity=0.073 Sum_probs=43.2
Q ss_pred hhhhhhhhhhccCCchhHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCccch-hhhhccCCccc
Q psy5204 6 TKINRVEHYLLRLTRIDTLSELIHRVYAAFEGRSSVDVAHVKFLMESYVSNADDW-KRYAQFDENRY 71 (209)
Q Consensus 6 ~~~~r~~~~~~~~~~~~~l~~li~~l~~~~~~~~~~~~~~v~~ll~~l~~~~~~w-~~~~~~~~~~Y 71 (209)
.=+|+++.-.. ..+..-++|++.++..-.+ ..+...+...+..|..+..++ ..|..|-|..|
T Consensus 15 ~yl~~VK~rF~--~~p~~Y~~FL~im~~fk~~--~~~~~~v~~rV~~Lf~~hpdLi~gFn~FLP~~~ 77 (80)
T 2cr7_A 15 TYLDQVKIRFG--SDPATYNGFLEIMKEFKSQ--SIDTPGVIRRVSQLFHEHPDLIVGFNAFLPSGP 77 (80)
T ss_dssp HHHHHHHHHTS--SCHHHHHHHHHHHHHHHTT--SSCHHHHHHHHHHHGGGCHHHHHHHHHHSSCSS
T ss_pred HHHHHHHHHHc--cChHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHcCCHHHHHHHHHHCcCCC
Confidence 34667775543 3567888999988775444 578888888888888864444 57777766554
No 151
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=42.89 E-value=51 Score=27.82 Aligned_cols=94 Identities=7% Similarity=0.091 Sum_probs=60.6
Q ss_pred EeeecCCCceEEEEEEccCCCccCCCCCCCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeCCcEEEEc
Q psy5204 74 NLVDEGDGKFNLILLCWSQGQASSIHDHAQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAENDVCYIN 153 (209)
Q Consensus 74 ~ll~~~~~~~~l~~~~W~pG~~spiHDH~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~G~v~~~~ 153 (209)
++|++ ..|-|+. .=.|.+++..| |..+--++.+++|.+....-+ ++ ......+++|+...++
T Consensus 25 k~v~~--~~~~V~~-vgGpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d---~g-----------~~~~V~i~eGemfllP 86 (286)
T 2qnk_A 25 KLMHQ--EQLKVMF-IGGPNTRKDYH-IEEGEEVFYQLEGDMVLRVLE---QG-----------KHRDVVIRQGEIFLLP 86 (286)
T ss_dssp EEEEE--SSEEEEE-ECSCBCCCCEE-ECSSCEEEEEEESCEEEEEEE---TT-----------EEEEEEECTTEEEEEC
T ss_pred EEEEe--ccEEEEE-EeCCCcCccCc-CCCCCeEEEEEeCeEEEEEEe---CC-----------ceeeEEECCCeEEEeC
Confidence 45554 3454443 46788999999 998899999999999988642 11 1246889999976665
Q ss_pred CCCCeEEEecCCCCCceEEEEEeCC-C---CCcceEEECC
Q psy5204 154 DSMGLHKVGNSGPHPAAVSLHLYSP-P---FNICSSFDAQ 189 (209)
Q Consensus 154 ~~~~iH~v~n~~~~~~avSLHvY~p-p---~~~~~~yd~~ 189 (209)
+ +--|+-.... .++.|=|=-. + +.+++-|...
T Consensus 87 ~-gv~HsP~r~~---et~gLviE~~R~~~~~D~l~wyc~~ 122 (286)
T 2qnk_A 87 A-RVPHSPQRFA---NTVGLVVERRRLETELDGLRYYVGD 122 (286)
T ss_dssp T-TCCEEEEECT---TCEEEEEEECCCTTCCEEEEEESTT
T ss_pred C-CCCcCCcccC---CeEEEEEeecCCCCCccceEEEcCC
Confidence 4 5589886542 3444433211 1 1235667665
No 152
>2q5x_A Nuclear pore complex protein NUP98; nucleoporin, autoproteolysis, precursor, protein transport; 1.90A {Homo sapiens} PDB: 2q5y_A 3tkn_C
Probab=29.01 E-value=17 Score=27.95 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=19.8
Q ss_pred cceEEECCCCceEEeeeeEEeccCe
Q psy5204 182 ICSSFDAQTGVKSRARLTYWSKFGH 206 (209)
Q Consensus 182 ~~~~yd~~~g~~~~~~~~~~s~~g~ 206 (209)
.+--||+.+|.+. .++.++|+||-
T Consensus 130 ~FvsYd~~tG~W~-F~V~HFS~ygl 153 (155)
T 2q5x_A 130 QFKEYRPETGSWV-FKVSHFAKYGL 153 (155)
T ss_dssp EEEEEETTTTEEE-EEESSCSCEEC
T ss_pred EEEEEeCCCcEEE-EEeCCcccccc
Confidence 3567999999998 77888999984
No 153
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=27.91 E-value=32 Score=29.11 Aligned_cols=37 Identities=5% Similarity=0.188 Sum_probs=27.7
Q ss_pred ceEEeeCCcEEEEcCCCCeEEEecCCC-CCceEEEEEeC
Q psy5204 140 SRTELAENDVCYINDSMGLHKVGNSGP-HPAAVSLHLYS 177 (209)
Q Consensus 140 ~~~~~~~G~v~~~~~~~~iH~v~n~~~-~~~avSLHvY~ 177 (209)
....+.+|++.+++. ..+|.+.|.|+ +..-+.+.++.
T Consensus 140 ~~~~m~~GE~w~~d~-~~~H~v~N~g~~~RIhLv~D~~~ 177 (290)
T 1e5r_A 140 TVIHMRPGEIWFLDA-ATVHSAVNFSEISRQSLCVDFAF 177 (290)
T ss_dssp EEECCCTTEEEECCT-TSCEEEEESSSSCCCEEEEEEBC
T ss_pred EEEecCCCCEEEEcC-CCeeEEEcCCCCCeEEEEEEecc
Confidence 356678999888875 67999999985 44567778843
No 154
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=26.59 E-value=66 Score=28.34 Aligned_cols=38 Identities=21% Similarity=0.112 Sum_probs=30.4
Q ss_pred eEEeeCCcEEEEcCCCCeEEEecCCCCCceEEEEEeCCCC
Q psy5204 141 RTELAENDVCYINDSMGLHKVGNSGPHPAAVSLHLYSPPF 180 (209)
Q Consensus 141 ~~~~~~G~v~~~~~~~~iH~v~n~~~~~~avSLHvY~pp~ 180 (209)
+..-.+||.++++. +-.|+|.|.. +-..|+++..+|-.
T Consensus 294 ~~~Q~~GeavfiPa-G~~HQV~Nl~-~~i~va~df~spe~ 331 (392)
T 2ypd_A 294 TLIQFLGDAIVLPA-GALHQVQNFH-SCIQVTEDFVSPEH 331 (392)
T ss_dssp EEEEETTCEEEECT-TCEEEEEESS-EEEEEEEEECCGGG
T ss_pred EEEEcCCCEEEecC-CCHHHHhccc-chhhHhhhhcChhh
Confidence 44557999888865 5699999997 57888899988874
No 155
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=26.23 E-value=1e+02 Score=22.25 Aligned_cols=65 Identities=12% Similarity=0.201 Sum_probs=39.2
Q ss_pred hhhhhhhhccC-CchhHHHHHHHHHHHHhcCC----CCCCHHHHHHHHHHhhcC-ccchhhhhc-cCCcc-ce
Q psy5204 8 INRVEHYLLRL-TRIDTLSELIHRVYAAFEGR----SSVDVAHVKFLMESYVSN-ADDWKRYAQ-FDENR-YT 72 (209)
Q Consensus 8 ~~r~~~~~~~~-~~~~~l~~li~~l~~~~~~~----~~~~~~~v~~ll~~l~~~-~~~w~~~~~-~~~~~-Y~ 72 (209)
++++-+|++.. |=...-.+|=..|-+++... .+-.-..++.++.-+..+ |++|..+.. +||++ |.
T Consensus 23 l~~y~~Clld~gpCtpegk~lK~~lpeAl~t~C~KCTekQK~~~~kvi~~l~~n~P~~W~~L~~KyDP~g~y~ 95 (112)
T 1k19_A 23 LVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQEKGAYRVIEHLIKNEIEIWRELTAKYDPTGNWR 95 (112)
T ss_dssp HHHHHHHHTTCSSSHHHHHHHHHHHHHHTTTTCTTSCSHHHHHHHHHHHHHHHHHSCHHHHHHHSSTTTCSSH
T ss_pred HHHHHhHHhcCCCCCHHHHHHHHHhHHHHhccCCCCCHHHHHHHHHHHHHHHHcChHHHHHHHHHHCCCchHH
Confidence 45666677642 22233355555667777754 233345566666666664 899997664 88875 54
No 156
>2f05_A Paired amphipathic helix protein SIN3B; helix bundle, transcription repressor; NMR {Mus musculus} SCOP: a.59.1.1
Probab=25.87 E-value=1.1e+02 Score=21.78 Aligned_cols=68 Identities=9% Similarity=0.134 Sum_probs=44.1
Q ss_pred hhhhhhhhhccCCchhHHHHHHHHHHHHhcCCC--------CCCHHHHHHHHHHhhcCccch-hhhhccCCccceEEee
Q psy5204 7 KINRVEHYLLRLTRIDTLSELIHRVYAAFEGRS--------SVDVAHVKFLMESYVSNADDW-KRYAQFDENRYTRNLV 76 (209)
Q Consensus 7 ~~~r~~~~~~~~~~~~~l~~li~~l~~~~~~~~--------~~~~~~v~~ll~~l~~~~~~w-~~~~~~~~~~Y~R~ll 76 (209)
=+|+++.-... .|.--++|++.++.--.+.. ..+..+|...++.|..+..|+ ..|..|-|..|.-.+-
T Consensus 13 YvnkVK~rF~d--~p~vY~~FL~IL~~yk~~~~d~~g~~~~~~s~~eV~~~V~~LF~~hpDLl~eFn~FLP~~~~~~~~ 89 (105)
T 2f05_A 13 YVNKIKTRFLD--HPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFT 89 (105)
T ss_dssp HHHHHHHHTTT--CHHHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTTTCHHHHHHHHHHSCGGGC----
T ss_pred HHHHHHHHHcc--ChHHHHHHHHHHHHHHhccccccccccccCcHHHHHHHHHHHHccCHHHHHHHHHHCCCccccCCC
Confidence 46777755544 56677888888876543220 135678889999998875555 5888888887665543
No 157
>3b09_A Peptidyl-prolyl CIS-trans isomerase; Val-Leu zipper, helices, chaperone; 1.90A {Shewanella}
Probab=25.75 E-value=1.3e+02 Score=20.48 Aligned_cols=34 Identities=12% Similarity=0.244 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHHhhc
Q psy5204 22 DTLSELIHRVYAAFEGRS-SVDVAHVKFLMESYVS 55 (209)
Q Consensus 22 ~~l~~li~~l~~~~~~~~-~~~~~~v~~ll~~l~~ 55 (209)
-.++.|++.|++++.+.. .++.++++..|.++..
T Consensus 52 lD~dav~~Gl~Dal~Gk~~~ls~eei~~~l~~~~~ 86 (88)
T 3b09_A 52 IDIPAVQAGLADAFAGKESAVSMEELQVAFTEISR 86 (88)
T ss_dssp CCHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 377889999999998763 5788999999988764
No 158
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=24.23 E-value=1.9e+02 Score=22.75 Aligned_cols=72 Identities=13% Similarity=0.196 Sum_probs=43.9
Q ss_pred ccCCCCC-CCceEEEEEEEeEEEEEEeeCCCCCCCCCCCCccccccceEEeeC-CcEEEEcCCCCeEEEecCCCCCceEE
Q psy5204 95 ASSIHDH-AQAHCFMKMLQGCLTEVRYQEPNHTSDEIGQDRPLSEISRTELAE-NDVCYINDSMGLHKVGNSGPHPAAVS 172 (209)
Q Consensus 95 ~spiHDH-~~s~~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~l~~~~~~~~~~-G~v~~~~~~~~iH~v~n~~~~~~avS 172 (209)
.-.-|+. .|+|..+.|+.|.++...|.- .+. .. .+..+.+ ++...+. +...|++...+ ++....
T Consensus 23 ~~~~h~t~~g~~~~l~v~~g~l~~~~~~e--~~~--------~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~ 88 (286)
T 3m70_A 23 FQEKHNTKVGTWGKLTVLKGKLKFYELTE--NGD--------VI--AEHIFTPESHIPFVE-PQAWHRVEALS-DDLECT 88 (286)
T ss_dssp GGSSBCCCTTCEEEEEEEESCEEEEEECT--TCC--------EE--EEEEECTTCCCCCBC-TTCCEEEEESS-TTCEEE
T ss_pred HHhhcCCCCceEEEEEEEEEEEEEEEEcC--CCC--------ce--eEEEEecCCCCceeC-hhheEEeeecC-cCceee
Confidence 3344552 236999999999998887752 221 11 2333444 4433344 35688888665 467778
Q ss_pred EEEeCCCC
Q psy5204 173 LHLYSPPF 180 (209)
Q Consensus 173 LHvY~pp~ 180 (209)
+-.|..+.
T Consensus 89 ~~~~~~~~ 96 (286)
T 3m70_A 89 LGFYCKKE 96 (286)
T ss_dssp EEEEEEGG
T ss_pred Hhhhccch
Confidence 88887663
No 159
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=24.17 E-value=1.2e+02 Score=21.22 Aligned_cols=27 Identities=15% Similarity=0.224 Sum_probs=24.9
Q ss_pred CceEEEEEeCCCCCcceEEECCCCceE
Q psy5204 168 PAAVSLHLYSPPFNICSSFDAQTGVKS 194 (209)
Q Consensus 168 ~~avSLHvY~pp~~~~~~yd~~~g~~~ 194 (209)
+..+-|.+.|.-+.+++.||+.|++..
T Consensus 65 ~~pvRIeffgdeIesIr~fD~~tq~s~ 91 (106)
T 3fpn_B 65 EHCIRVEFFGDEIERIREVDALTGEVL 91 (106)
T ss_dssp CCEEEEEEETTEEEEEEEECTTTCCEE
T ss_pred CceEEEEEECCEEeEEEEECcccCcEe
Confidence 578999999999999999999999876
No 160
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=23.00 E-value=1.2e+02 Score=24.30 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=29.1
Q ss_pred eEEeeCCcEEEEcCCCCeEEEe-cCCC-CCceEEEEEeCCC
Q psy5204 141 RTELAENDVCYINDSMGLHKVG-NSGP-HPAAVSLHLYSPP 179 (209)
Q Consensus 141 ~~~~~~G~v~~~~~~~~iH~v~-n~~~-~~~avSLHvY~pp 179 (209)
...+++|+++.+.. .-+|+-. |.++ ...++++|...+.
T Consensus 229 ~~~~~aGd~~~f~~-~~~H~s~~N~s~~~R~~~~~~~~~~~ 268 (291)
T 2opw_A 229 PTPVQRGALVLIHG-EVVHKSKQNLSDRSRQAYTFHLMEAS 268 (291)
T ss_dssp EECBCTTCEEEEET-TCEEEECCBCSSSCCCEEEEEEEECT
T ss_pred ecccCCCcEEEEcC-CceecCCCCCCCCceEEEEEEEEcCC
Confidence 46678999999987 5799876 7663 4679999977653
No 161
>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=21.84 E-value=1.4e+02 Score=19.76 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=29.0
Q ss_pred chhHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCccch
Q psy5204 20 RIDTLSELIHRVYAAFEGRSSVDVAHVKFLMESYVSNADDW 60 (209)
Q Consensus 20 ~~~~l~~li~~l~~~~~~~~~~~~~~v~~ll~~l~~~~~~w 60 (209)
....+.+.|+.|+++|..- .-.-|+++|..|..|.+.-
T Consensus 9 ~~~~l~s~I~qV~DLfPdL---G~gfi~~~L~~y~~nvE~v 46 (71)
T 2di0_A 9 CGVELDSLISQVKDLLPDL---GEGFILACLEYYHYDPEQV 46 (71)
T ss_dssp SSHHHHHHHHHHHHHCCSS---CHHHHHHHHHHTTTCHHHH
T ss_pred cHHHHHHHHHHHHHHcccC---CHHHHHHHHHHhCCCHHHH
Confidence 4678899999999999864 4567888888887765543
No 162
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=20.67 E-value=40 Score=24.02 Aligned_cols=53 Identities=17% Similarity=0.106 Sum_probs=35.9
Q ss_pred chhHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCccchhhhhc-cCCccceEEe
Q psy5204 20 RIDTLSELIHRVYAAFEGRSSVDVAHVKFLMESYVSNADDWKRYAQ-FDENRYTRNL 75 (209)
Q Consensus 20 ~~~~l~~li~~l~~~~~~~~~~~~~~v~~ll~~l~~~~~~w~~~~~-~~~~~Y~R~l 75 (209)
.+..++++.+.|.+.+...+..++++++.++. .++..-.++.. ||..++||..
T Consensus 60 ~~~~~~~~~~~l~~~~~~~~~it~ae~Rd~lg---~sRK~ai~lLE~~Dr~g~TrR~ 113 (121)
T 2pjp_A 60 RNDRIVEFANMIRDLDQECGSTCAADFRDRLG---VGRKLAIQILEYFDRIGFTRRR 113 (121)
T ss_dssp EHHHHHHHHHHHHHHHHHHSSEEHHHHHHHHT---SCHHHHHHHHHHHHHHTSEEEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCccHHHHHHHHC---CcHHHHHHHHHHHhhcCCeEee
Confidence 35677777777777776555788888888883 44443334443 6777888764
Done!