BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5212
(141 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 4 LRLKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRA 63
+RLK RL +DFE LKVIGRGAF EV +V+ K TG VYAMKI+ K DML++ +V+ R
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE 110
Query: 64 ERDVLVEADHQWV 76
ERDVLV D +W+
Sbjct: 111 ERDVLVNGDRRWI 123
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIGRG F EV +V+ K TG VYAMKI+ K DML++ +V+ R ERDVLV D +W+ +++
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127
Query: 136 YSFQ 139
++FQ
Sbjct: 128 FAFQ 131
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 83.6 bits (205), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 5 RLKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAE 64
++K+ RL EDFE LKVIGRGAFGEV +V+ K+ V+AMKIL K +ML++ + A R E
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 65 RDVLVEADHQWV 76
RDVLV D +W+
Sbjct: 125 RDVLVNGDSKWI 136
Score = 74.7 bits (182), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIGRG FGEV +V+ K+ V+AMKIL K +ML++ + A R ERDVLV D +W+ ++
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 136 YSFQ 139
Y+FQ
Sbjct: 141 YAFQ 144
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 81.6 bits (200), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAER 65
+K +L EDFE +KVIGRGAFGEV +V+ K+T +YAMKIL K +ML++ + A R ER
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 66 DVLVEADHQWV 76
DVLV D QW+
Sbjct: 142 DVLVNGDCQWI 152
Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIGRG FGEV +V+ K+T +YAMKIL K +ML++ + A R ERDVLV D QW+ ++
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 136 YSFQ 139
Y+FQ
Sbjct: 157 YAFQ 160
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAER 65
+K +L EDFE +KVIGRGAFGEV +V+ K+T +YAMKIL K +ML++ + A R ER
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 66 DVLVEADHQWVIG 78
DVLV D QW+
Sbjct: 126 DVLVNGDCQWITA 138
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIGRG FGEV +V+ K+T +YAMKIL K +ML++ + A R ERDVLV D QW+ ++
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 140
Query: 136 YSFQ 139
Y+FQ
Sbjct: 141 YAFQ 144
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 5 RLKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAE 64
+++ R+ ED+E +KVIGRGAFGEV+LV+ K T VYAMK+L K +M+++ A E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 65 RDVLVEADHQWVI 77
RD++ A+ WV+
Sbjct: 120 RDIMAFANSPWVV 132
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIGRG FGEV+LV+ K T VYAMK+L K +M+++ A ERD++ A+ WVV+++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 136 YSFQ 139
Y+FQ
Sbjct: 136 YAFQ 139
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 5 RLKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAE 64
+++ R+ ED+E +KVIGRGAFGEV+LV+ K T VYAMK+L K +M+++ A E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 65 RDVLVEADHQWVI 77
RD++ A+ WV+
Sbjct: 125 RDIMAFANSPWVV 137
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIGRG FGEV+LV+ K T VYAMK+L K +M+++ A ERD++ A+ WVV+++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 136 YSFQ 139
Y+FQ
Sbjct: 141 YAFQ 144
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 5 RLKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAE 64
+++ R+ ED+E +KVIGRGAFGEV+LV+ K T VYAMK+L K +M+++ A E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 65 RDVLVEADHQWVI 77
RD++ A+ WV+
Sbjct: 125 RDIMAFANSPWVV 137
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIGRG FGEV+LV+ K T VYAMK+L K +M+++ A ERD++ A+ WVV+++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 136 YSFQ 139
Y+FQ
Sbjct: 141 YAFQ 144
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 51/73 (69%)
Query: 5 RLKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAE 64
+++ ++ ED++ +KVIGRGAFGEV+LV+ K + VYAMK+L K +M+++ A E
Sbjct: 66 KIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE 125
Query: 65 RDVLVEADHQWVI 77
RD++ A+ WV+
Sbjct: 126 RDIMAFANSPWVV 138
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIGRG FGEV+LV+ K + VYAMK+L K +M+++ A ERD++ A+ WVV+++
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 136 YSFQ 139
+FQ
Sbjct: 142 CAFQ 145
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 76 VIGRGVFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVV 132
V+G+G FG+V LV+K D+GH+YAMK+L+KA + +++V + ERD+L + +H +VV
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILADVNHPFVV 93
Query: 133 KMYYSFQS 140
K++Y+FQ+
Sbjct: 94 KLHYAFQT 101
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Query: 16 FEPLKVIGRGAFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
FE LKV+G+G+FG+V LV+K D+GH+YAMK+L+KA + +++V + ERD+L + +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILADVN 88
Query: 73 HQWVI 77
H +V+
Sbjct: 89 HPFVV 93
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%)
Query: 8 RSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 67
R+++ + DF+ LK++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E V
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 68 LVEADHQWVIG 78
L H ++
Sbjct: 62 LQNTRHPFLTA 72
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
+ + D+ ++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 6 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 127 DHQWVVKMYYSFQS 140
H ++ + Y+FQ+
Sbjct: 66 RHPFLTALKYAFQT 79
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 9 SRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
SR+ + +FE LK++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E VL
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 69 VEADHQWVIG 78
+ H ++
Sbjct: 63 QNSRHPFLTA 72
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 63 AERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 122
R + E ++ ++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E V
Sbjct: 2 GSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 123 LVEADHQWVVKMYYSFQS 140
L + H ++ + YSFQ+
Sbjct: 62 LQNSRHPFLTALKYSFQT 79
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 65 RDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 124
R + E ++ ++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E VL
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 125 EADHQWVVKMYYSFQS 140
+ H ++ + YSFQ+
Sbjct: 65 NSRHPFLTALKYSFQT 80
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 9 SRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
+R+ + +FE LK++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E VL
Sbjct: 4 ARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 63
Query: 69 VEADHQWVIG 78
+ H ++
Sbjct: 64 QNSRHPFLTA 73
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 65 RDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 124
R + E ++ ++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E VL
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 125 EADHQWVVKMYYSFQS 140
+ H ++ + YSFQ+
Sbjct: 66 NSRHPFLTALKYSFQT 81
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%)
Query: 9 SRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
R+ + +FE LK++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E VL
Sbjct: 5 PRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 69 VEADHQWVIG 78
+ H ++
Sbjct: 65 QNSRHPFLTA 74
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
+ + D+ ++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 127 DHQWVVKMYYSFQS 140
H ++ + Y+FQ+
Sbjct: 63 RHPFLTALKYAFQT 76
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
++ + DF+ LK++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 70 EADHQWVIG 78
H ++
Sbjct: 61 NTRHPFLTA 69
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 65 RDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 124
R + E ++ ++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E VL
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 125 EADHQWVVKMYYSFQS 140
+ H ++ + YSFQ+
Sbjct: 204 NSRHPFLTALKYSFQT 219
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERD 66
+ R+ + +FE LK++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E
Sbjct: 141 PKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 67 VLVEADHQWVIG 78
VL + H ++
Sbjct: 201 VLQNSRHPFLTA 212
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 65 RDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 124
R + E ++ ++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E VL
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 125 EADHQWVVKMYYSFQS 140
+ H ++ + YSFQ+
Sbjct: 207 NSRHPFLTALKYSFQT 222
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERD 66
+ R+ + +FE LK++G+G FG+V LV++K TG YAMKIL+K ++ K++VAH E
Sbjct: 144 PKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 203
Query: 67 VLVEADHQWVIG 78
VL + H ++
Sbjct: 204 VLQNSRHPFLTA 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
+ + D+ ++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 127 DHQWVVKMYYSFQS 140
H ++ + Y+FQ+
Sbjct: 63 RHPFLTALKYAFQT 76
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
++ + DF+ LK++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 70 EADHQWVIG 78
H ++
Sbjct: 61 NTRHPFLTA 69
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
+ + D+ ++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 127 DHQWVVKMYYSFQS 140
H ++ + Y+FQ+
Sbjct: 63 RHPFLTALKYAFQT 76
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
++ + DF+ LK++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 70 EADHQWVIG 78
H ++
Sbjct: 61 NTRHPFLTA 69
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
+ + D+ ++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 127 DHQWVVKMYYSFQS 140
H ++ + Y+FQ+
Sbjct: 63 RHPFLTALKYAFQT 76
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
++ + DF+ LK++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 70 EADHQWVIG 78
H ++
Sbjct: 61 NTRHPFLTA 69
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
+ + D+ ++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 127 DHQWVVKMYYSFQS 140
H ++ + Y+FQ+
Sbjct: 68 RHPFLTALKYAFQT 81
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 9 SRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
++ + DF+ LK++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 5 PKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 69 VEADHQWVIG 78
H ++
Sbjct: 65 QNTRHPFLTA 74
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
+ + D+ ++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 127 DHQWVVKMYYSFQS 140
H ++ + Y+FQ+
Sbjct: 63 RHPFLTALKYAFQT 76
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
++ + DF+ LK++G+G FG+V LV++K TG YAMKILRK ++ K++VAH E VL
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 70 EADHQWVIG 78
H ++
Sbjct: 61 NTRHPFLTA 69
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVA-HVRAER 65
++G+E+FE LKV+G GA+G+V LV+K DTG +YAMK+L+KA +++K + H R ER
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 66 DVL 68
VL
Sbjct: 110 QVL 112
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 76 VIGRGVFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVA-HVRAERDVLVEA-DHQW 130
V+G G +G+V LV+K DTG +YAMK+L+KA +++K + H R ER VL +
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 131 VVKMYYSFQS 140
+V ++Y+FQ+
Sbjct: 121 LVTLHYAFQT 130
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%), Gaps = 4/68 (5%)
Query: 76 VIGRGVFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVV 132
V+G+G FG+V LV+K D +YAMK+L+KA + +++V + ERD+LVE +H ++V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVNHPFIV 89
Query: 133 KMYYSFQS 140
K++Y+FQ+
Sbjct: 90 KLHYAFQT 97
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Query: 16 FEPLKVIGRGAFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
FE LKV+G+G+FG+V LV+K D +YAMK+L+KA + +++V + ERD+LVE +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVN 84
Query: 73 HQWVI 77
H +++
Sbjct: 85 HPFIV 89
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%), Gaps = 4/68 (5%)
Query: 76 VIGRGVFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVV 132
V+G+G FG+V LV+K D +YAMK+L+KA + +++V + ERD+LVE +H ++V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVNHPFIV 89
Query: 133 KMYYSFQS 140
K++Y+FQ+
Sbjct: 90 KLHYAFQT 97
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Query: 16 FEPLKVIGRGAFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
FE LKV+G+G+FG+V LV+K D +YAMK+L+KA + +++V + ERD+LVE +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVN 84
Query: 73 HQWVI 77
H +++
Sbjct: 85 HPFIV 89
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%), Gaps = 4/68 (5%)
Query: 76 VIGRGVFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVV 132
V+G+G FG+V LV+K D +YAMK+L+KA + +++V + ERD+LVE +H ++V
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVNHPFIV 90
Query: 133 KMYYSFQS 140
K++Y+FQ+
Sbjct: 91 KLHYAFQT 98
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Query: 16 FEPLKVIGRGAFGEVRLVQK---KDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
FE LKV+G+G+FG+V LV+K D +YAMK+L+KA + +++V + ERD+LVE +
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVN 85
Query: 73 HQWVI 77
H +++
Sbjct: 86 HPFIV 90
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
IG+G FG+V +VQK DT +YAMK + K +E+ +V +V E ++ +H ++V ++Y
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 137 SFQ 139
SFQ
Sbjct: 83 SFQ 85
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVE 70
+ + FE L+ IG+G+FG+V +VQK DT +YAMK + K +E+ +V +V E ++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 71 ADHQWVIG 78
+H +++
Sbjct: 72 LEHPFLVN 79
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 76 VIGRGVFG---EVRLVQKKDTGHVYAMKILRKADMLEKEQ-VAHVRAERDVLVEADHQWV 131
V+G+G +G +VR V +TG ++AMK+L+KA ++ + AH +AER++L E H ++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 132 VKMYYSFQS 140
V + Y+FQ+
Sbjct: 84 VDLIYAFQT 92
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 14 EDFEPLKVIGRGAFG---EVRLVQKKDTGHVYAMKILRKADMLEKEQ-VAHVRAERDVLV 69
E FE L+V+G+G +G +VR V +TG ++AMK+L+KA ++ + AH +AER++L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 70 EADHQWVI 77
E H +++
Sbjct: 77 EVKHPFIV 84
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 76 VIGRGVFG---EVRLVQKKDTGHVYAMKILRKADMLEKEQ-VAHVRAERDVLVEADHQWV 131
V+G+G +G +VR V +TG ++AMK+L+KA ++ + AH +AER++L E H ++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 132 VKMYYSFQS 140
V + Y+FQ+
Sbjct: 84 VDLIYAFQT 92
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 14 EDFEPLKVIGRGAFG---EVRLVQKKDTGHVYAMKILRKADMLEKEQ-VAHVRAERDVLV 69
E FE L+V+G+G +G +VR V +TG ++AMK+L+KA ++ + AH +AER++L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 70 EADHQWVI 77
E H +++
Sbjct: 77 EVKHPFIV 84
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 9 SRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
S LG++DF+ L+VIGRG++ +V LV+ K T +YAMK+++K + + E + V+ E+ V
Sbjct: 15 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVF 74
Query: 69 VEA-DHQWVIG 78
+A +H +++G
Sbjct: 75 EQASNHPFLVG 85
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA-DHQWVVKM 134
VIGRG + +V LV+ K T +YAMK+++K + + E + V+ E+ V +A +H ++V +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 135 YYSFQS 140
+ FQ+
Sbjct: 87 HSCFQT 92
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 76
Query: 136 YSFQ 139
++FQ
Sbjct: 77 FTFQ 80
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 74 QWVI 77
+ +
Sbjct: 70 PFFV 73
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 73
Query: 136 YSFQ 139
++FQ
Sbjct: 74 FTFQ 77
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 74 QWVI 77
+ +
Sbjct: 67 PFFV 70
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 74
Query: 136 YSFQ 139
++FQ
Sbjct: 75 FTFQ 78
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 74 QWVI 77
+ +
Sbjct: 68 PFFV 71
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 75
Query: 136 YSFQ 139
++FQ
Sbjct: 76 FTFQ 79
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 74 QWVI 77
+ +
Sbjct: 69 PFFV 72
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERD 66
+RLG+++FE ++V+G+G+FG+V L + K+TG +YA+K+L+K +L+ + V E+
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 67 VLVEA-DHQWV 76
+L A +H ++
Sbjct: 76 ILSLARNHPFL 86
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA-DHQWVVKM 134
V+G+G FG+V L + K+TG +YA+K+L+K +L+ + V E+ +L A +H ++ ++
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 135 YYSFQS 140
+ FQ+
Sbjct: 90 FCCFQT 95
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 136 YSFQ 139
++FQ
Sbjct: 99 FTFQ 102
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 QWVI 77
+ +
Sbjct: 92 PFFV 95
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 80
Query: 136 YSFQ 139
++FQ
Sbjct: 81 FTFQ 84
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 74 QWVI 77
+ +
Sbjct: 74 PFFV 77
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 136 YSFQ 139
++FQ
Sbjct: 99 FTFQ 102
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 QWVI 77
+ +
Sbjct: 92 PFFV 95
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 136 YSFQ 139
++FQ
Sbjct: 96 FTFQ 99
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 74 QWVI 77
+ +
Sbjct: 89 PFFV 92
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 136 YSFQ 139
++FQ
Sbjct: 100 FTFQ 103
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 74 QWVI 77
+ +
Sbjct: 93 PFFV 96
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 136 YSFQ 139
++FQ
Sbjct: 97 FTFQ 100
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 74 QWVI 77
+ +
Sbjct: 90 PFFV 93
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 136 YSFQ 139
++FQ
Sbjct: 97 FTFQ 100
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 74 QWVI 77
+ +
Sbjct: 90 PFFV 93
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 101
Query: 136 YSFQ 139
++FQ
Sbjct: 102 FTFQ 105
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 74 QWVI 77
+ +
Sbjct: 95 PFFV 98
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 136 YSFQ 139
++FQ
Sbjct: 96 FTFQ 99
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 74 QWVI 77
+ +
Sbjct: 89 PFFV 92
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 136 YSFQ 139
++FQ
Sbjct: 99 FTFQ 102
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 QWVI 77
+ +
Sbjct: 92 PFFV 95
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 136 YSFQ 139
++FQ
Sbjct: 100 FTFQ 103
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 74 QWVI 77
+ +
Sbjct: 93 PFFV 96
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 136 YSFQ 139
++FQ
Sbjct: 99 FTFQ 102
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 QWVI 77
+ +
Sbjct: 92 PFFV 95
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 136 YSFQ 139
++FQ
Sbjct: 97 FTFQ 100
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 74 QWVI 77
+ +
Sbjct: 90 PFFV 93
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 136 YSFQ 139
++FQ
Sbjct: 99 FTFQ 102
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 QWVI 77
+ +
Sbjct: 92 PFFV 95
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 136 YSFQ 139
++FQ
Sbjct: 99 FTFQ 102
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 QWVI 77
+ +
Sbjct: 92 PFFV 95
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 9 SRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
S LG++DF+ L+VIGRG++ +V LV+ K T +YAM++++K + + E + V+ E+ V
Sbjct: 47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVF 106
Query: 69 VEA-DHQWVIG 78
+A +H +++G
Sbjct: 107 EQASNHPFLVG 117
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA-DHQWVVKM 134
VIGRG + +V LV+ K T +YAM++++K + + E + V+ E+ V +A +H ++V +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 135 YYSFQS 140
+ FQ+
Sbjct: 119 HSCFQT 124
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 136 YSFQ 139
+ FQ
Sbjct: 104 FCFQ 107
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F V L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 74 QWVI 77
+ +
Sbjct: 97 PFFV 100
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVE 70
LG++DF+ L+VIGRG++ +V LV+ K T +YAMK+++K + + E + V+ E+ V +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 71 A-DHQWVIG 78
A +H +++G
Sbjct: 62 ASNHPFLVG 70
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA-DHQWVVKM 134
VIGRG + +V LV+ K T +YAMK+++K + + E + V+ E+ V +A +H ++V +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 135 YYSFQS 140
+ FQ+
Sbjct: 72 HSCFQT 77
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVE 70
LG++DF+ L+VIGRG++ +V LV+ K T +YAMK+++K + + E + V+ E+ V +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 71 A-DHQWVIG 78
A +H +++G
Sbjct: 66 ASNHPFLVG 74
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA-DHQWVVKM 134
VIGRG + +V LV+ K T +YAMK+++K + + E + V+ E+ V +A +H ++V +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 135 YYSFQS 140
+ FQ+
Sbjct: 76 HSCFQT 81
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G F L ++ T YA+KIL K ++++ +V +V ERDV+ DH + VK+Y
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 136 YSFQ 139
++FQ
Sbjct: 97 FTFQ 100
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
EDF+ K++G G+F L ++ T YA+KIL K ++++ +V +V ERDV+ DH
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 74 QWVI 77
+ +
Sbjct: 90 PFFV 93
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein
Kinase Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 9 SRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
+ ++DF+ L+ +G G+FG V L++ + G YAMK+L+K ++ +QV H ER +L
Sbjct: 1 PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60
Query: 69 VEADHQWVI 77
H ++I
Sbjct: 61 SIVTHPFII 69
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V L++ + G YAMK+L+K ++ +QV H ER +L H ++++M+
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 136 YSFQ 139
+FQ
Sbjct: 73 GTFQ 76
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV-EADHQWVVKM 134
VIG+G FG+V L + K YA+K+L+K +L+K++ H+ +ER+VL+ H ++V +
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 135 YYSFQSV 141
++SFQ+
Sbjct: 105 HFSFQTA 111
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV-EAD 72
DF LKVIG+G+FG+V L + K YA+K+L+K +L+K++ H+ +ER+VL+
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 73 HQWVIG 78
H +++G
Sbjct: 98 HPFLVG 103
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ +AMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
YSF+
Sbjct: 108 YSFK 111
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ +AMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 73 HQWVI 77
+++
Sbjct: 101 FPFLV 105
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 69 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 136 YSFQ 139
+SF+
Sbjct: 129 FSFK 132
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 73 HQWVI 77
+++
Sbjct: 121 FPFLV 125
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 73 HQWVI 77
+++
Sbjct: 101 FPFLV 105
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 136 YSFQ 139
+SF+
Sbjct: 101 FSFK 104
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 73 HQWVI 77
+++
Sbjct: 93 FPFLV 97
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 73 HQWVI 77
+++
Sbjct: 101 FPFLV 105
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 73 HQWVI 77
+++
Sbjct: 101 FPFLV 105
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ +AMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
YSF+
Sbjct: 108 YSFK 111
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ +AMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 136 YSFQ 139
+SF+
Sbjct: 101 FSFK 104
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 73 HQWVI 77
+++
Sbjct: 93 FPFLV 97
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ +AMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
YSF+
Sbjct: 108 YSFK 111
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ K+TG+ +AMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 10 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 66
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 67 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 98
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 73 HQWVI 77
+++
Sbjct: 87 FPFLV 91
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 18 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 74
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 75 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 106
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 73 HQWVI 77
+++
Sbjct: 95 FPFLV 99
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 44 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 100
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 73 HQWVI 77
+++
Sbjct: 121 FPFLV 125
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 44 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 100
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 73 HQWVI 77
+++
Sbjct: 121 FPFLV 125
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 24 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 80
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 73 HQWVI 77
+++
Sbjct: 101 FPFLV 105
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 49 KADMLEK-EQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
K D L+K E + A+ D + D +G G FG V LV+ K++G+ YAMKIL K +
Sbjct: 23 KEDFLKKWETPSQNTAQLD---QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 108 LEKEQVAHVRAERDVLVEADHQWVVKMYYSFQ 139
++ +Q+ H E+ +L + ++VK+ +SF+
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ F+ +K +G G+FG V LV+ K++G+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K IG G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K IG G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K IG G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 8 RSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 67
R R+ + DF L V+G+G+FG+V L ++K T +YA+KIL+K +++ + V E+ V
Sbjct: 335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 394
Query: 68 L 68
L
Sbjct: 395 L 395
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 64 ERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 123
+R L + + V+G+G FG+V L ++K T +YA+KIL+K +++ + V E+ VL
Sbjct: 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 124 -VEADHQWVVKMYYSFQSV 141
+ ++ +++ FQ++
Sbjct: 396 ALPGKPPFLTQLHSCFQTM 414
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 73 HQWVI 77
+++
Sbjct: 101 FPFLV 105
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 73 HQWVI 77
+++
Sbjct: 101 FPFLV 105
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 73 HQWVI 77
+++
Sbjct: 101 FPFLV 105
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 34 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 136 YSFQ 139
+SF+
Sbjct: 94 FSFK 97
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 73 HQWVI 77
+++
Sbjct: 86 FPFLV 90
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ + + ++VK+
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 67
++ FE ++ +G G+FG V LV+ K+TG+ YAMKIL K +++ +Q+ H E+ +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++ K+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++ K+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L + ++ K+
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 136 YSFQ 139
+SF+
Sbjct: 109 FSFK 112
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +Q+ H E+ +L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +++ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +++ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG V LV+ +TG+ YAMKIL K +++ +++ H E+ +L + ++VK+
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 136 YSFQ 139
+SF+
Sbjct: 108 FSFK 111
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
++ FE +K +G G+FG V LV+ +TG+ YAMKIL K +++ +++ H E+ +L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 73 HQWVI 77
+++
Sbjct: 100 FPFLV 104
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERD 66
R R+ + DF L V+G+G+FG+V L ++K T +YA+KIL+K +++ + V E+
Sbjct: 13 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 67 VL 68
VL
Sbjct: 73 VL 74
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 68 LVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL-VEA 126
L + + V+G+G FG+V L ++K T +YA+KIL+K +++ + V E+ VL +
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 127 DHQWVVKMYYSFQSV 141
++ +++ FQ++
Sbjct: 79 KPPFLTQLHSCFQTM 93
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAER---DVLVEADHQWVV 132
+IGRG FGEV +K DTG +YAMK L K + K+ ER ++ D ++V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 133 KMYYSFQS 140
M Y+F +
Sbjct: 256 CMSYAFHT 263
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
L + DF ++IGRG FGEV +K DTG +YAMK L K
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAER---DVLVEADHQWVV 132
+IGRG FGEV +K DTG +YAMK L K + K+ ER ++ D ++V
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 133 KMYYSFQS 140
M Y+F +
Sbjct: 255 CMSYAFHT 262
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
L + DF ++IGRG FGEV +K DTG +YAMK L K
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 223
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With
Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With
Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With
Nvp-Aeb071
Length = 360
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
R+ + DF L V+G+G+FG+V L +K T +YA+KIL+K +++ + V E+ VL
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 70 EAD 72
D
Sbjct: 75 LLD 77
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 68 LVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 127
L + + V+G+G FG+V L +K T +YA+KIL+K +++ + V E+ VL D
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 128 -HQWVVKMYYSFQSV 141
++ +++ FQ+V
Sbjct: 78 KPPFLTQLHSCFQTV 92
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAER---DVLVEADHQWVV 132
+IGRG FGEV +K DTG +YAMK L K + K+ ER ++ D ++V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 133 KMYYSFQS 140
M Y+F +
Sbjct: 256 CMSYAFHT 263
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
L + DF ++IGRG FGEV +K DTG +YAMK L K
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAER---DVLVEADHQWVV 132
+IGRG FGEV +K DTG +YAMK L K + K+ ER ++ D ++V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 133 KMYYSFQS 140
M Y+F +
Sbjct: 256 CMSYAFHT 263
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
L + DF ++IGRG FGEV +K DTG +YAMK L K
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The
Protein Kinase C Theta In Complex With Nvp-Xaa228 At
2.32a Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The
Protein Kinase C Theta In Complex With Nvp-Xaa228 At
2.32a Resolution
Length = 352
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
+L +EDFE K++G+G+FG+V L + K T +A+K L+K +L + V E+ VL
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 70 EA 71
A
Sbjct: 74 LA 75
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA-DHQWVVKM 134
++G+G FG+V L + K T +A+K L+K +L + V E+ VL A +H ++ M
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 135 YYSFQS 140
+ +FQ+
Sbjct: 85 FCTFQT 90
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 74 QWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVK 133
Q V+G+G FGEV L + K TG A+K++ K + +K + E +L + DH ++K
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 134 MYYSFQ 139
+Y F+
Sbjct: 91 LYEFFE 96
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+V+G+G+FGEV L + K TG A+K++ K + +K + E +L + DH ++
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 74 QWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVK 133
Q V+G+G FGEV L + K TG A+K++ K + +K + E +L + DH ++K
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 134 MYYSFQ 139
+Y F+
Sbjct: 114 LYEFFE 119
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+V+G+G+FGEV L + K TG A+K++ K + +K + E +L + DH ++
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 74 QWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVK 133
Q V+G+G FGEV L + K TG A+K++ K + +K + E +L + DH ++K
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 134 MYYSFQ 139
+Y F+
Sbjct: 115 LYEFFE 120
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+V+G+G+FGEV L + K TG A+K++ K + +K + E +L + DH ++
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA-DHQWVVKM 134
++G+G FG+V L + K T +A+K L+K +L + V E+ VL A +H ++ M
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 135 YYSFQS 140
+ +FQ+
Sbjct: 84 FCTFQT 89
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
+L +EDF K++G+G+FG+V L + K T +A+K L+K +L + V E+ VL
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 70 EA 71
A
Sbjct: 73 LA 74
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 74 QWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVK 133
Q V+G+G FGEV L + K TG A+K++ K + +K + E +L + DH ++K
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 134 MYYSFQ 139
+Y F+
Sbjct: 97 LYEFFE 102
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+V+G+G+FGEV L + K TG A+K++ K + +K + E +L + DH ++
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G G +GEV L + K TG A+KI++K+ + + E VL + DH ++K+Y
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 137 SFQ 139
F+
Sbjct: 89 FFE 91
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 12 GVED-FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVE 70
G+ D ++ +K +G GA+GEV L + K TG A+KI++K+ + + E VL +
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 71 ADHQWVI 77
DH ++
Sbjct: 78 LDHPNIM 84
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G G +GEV L + K TG A+KI++K+ + + E VL + DH ++K+Y
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 137 SFQ 139
F+
Sbjct: 72 FFE 74
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 12 GVED-FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVE 70
G+ D ++ +K +G GA+GEV L + K TG A+KI++K+ + + E VL +
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 71 ADHQWVI 77
DH ++
Sbjct: 61 LDHPNIM 67
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.4 bits (93), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 74 QWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVK 133
Q V+G+G FGEV L + K TG A+K++ K + +K + E +L + DH + K
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 134 MYYSFQ 139
+Y F+
Sbjct: 91 LYEFFE 96
Score = 36.2 bits (82), Expect = 0.007, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
+V+G+G+FGEV L + K TG A+K++ K + +K + E +L + DH
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+ + + ++DF+ ++ +G+G FG V L ++K + A+K+L K+ LEKE V H
Sbjct: 6 MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEH 59
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + A+K+L K+ LEKE V H +R E ++ H +++MY
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 136 YSFQ 139
F
Sbjct: 81 NYFH 84
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 56
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 136 YSFQ 139
F
Sbjct: 78 GYFH 81
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 56
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 136 YSFQ 139
F
Sbjct: 78 GYFH 81
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective
Imidazopyrazine Inhibitor
Length = 283
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 56
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 136 YSF 138
F
Sbjct: 78 GYF 80
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 56
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 136 YSFQ 139
F
Sbjct: 78 GYFH 81
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K++ + A+K+L KA LEK V H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQ-LEKAGVEH 53
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K++ + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 136 YSFQ 139
F
Sbjct: 75 GYFH 78
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 54
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 136 YSF 138
F
Sbjct: 76 GYF 78
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 54
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 136 YSF 138
F
Sbjct: 76 GYF 78
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 58
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 136 YSF 138
F
Sbjct: 80 GYF 82
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 55
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 136 YSF 138
F
Sbjct: 77 GYF 79
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 55
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 136 YSF 138
F
Sbjct: 77 GYF 79
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
A 5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With
A 5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 58
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 136 YSFQ 139
F
Sbjct: 80 GYFH 83
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEH 70
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 91
Query: 136 YSF 138
F
Sbjct: 92 GYF 94
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 54
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 136 YSF 138
F
Sbjct: 76 GYF 78
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 58
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 136 YSF 138
F
Sbjct: 80 GYF 82
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 58
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 136 YSF 138
F
Sbjct: 80 GYF 82
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 53
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 136 YSF 138
F
Sbjct: 75 GYF 77
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEH 58
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 136 YSF 138
F
Sbjct: 80 GYF 82
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEH 79
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 136 YSF 138
F
Sbjct: 101 GYF 103
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
K+ + +EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEH 79
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 136 YSF 138
F
Sbjct: 101 GYF 103
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G G FG+V ++ TG A KI++ M +KE+ V+ E V+ + DH ++++Y
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE---VKNEISVMNQLDHANLIQLY 152
Query: 136 YSFQS 140
+F+S
Sbjct: 153 DAFES 157
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+++G G FG+V ++ TG A KI++ M +KE+ V+ E V+ + DH +I
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE---VKNEISVMNQLDHANLI 149
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
Length = 303
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
DFE + V+G+GAFG+V + YA+K +R + E+++ + +E +L +H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLASLNH 61
Query: 74 QWVI 77
Q+V+
Sbjct: 62 QYVV 65
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+G+G FG+V + YA+K +R + E+++ + +E +L +HQ+VV+ Y
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLASLNHQYVVRYY 68
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase
By A Novel Class Of High Affinity Disubstituted
Pyrimidine Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target
Kinase Selectivity
Length = 272
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 57
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 136 YSFQ 139
F
Sbjct: 79 GYFH 82
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 53
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 136 YSF 138
F
Sbjct: 75 GYF 77
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 52
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 73
Query: 136 YSFQ 139
F
Sbjct: 74 GYFH 77
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 56
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 136 YSF 138
F
Sbjct: 78 GYF 80
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 53
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 136 YSFQ 139
F
Sbjct: 75 GYFH 78
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 53
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 136 YSFQ 139
F
Sbjct: 75 GYFH 78
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 53
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 136 YSF 138
F
Sbjct: 75 GYF 77
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 53
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 136 YSFQ 139
F
Sbjct: 75 GYFH 78
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 53
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 136 YSF 138
F
Sbjct: 75 GYF 77
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + A+K+L K+ LEKE V H +R E ++ H +++MY
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNILRMY 81
Query: 136 YSFQ 139
F
Sbjct: 82 NYFH 85
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+ + + ++DF+ + +G+G FG V L ++K + A+K+L K+ LEKE V H
Sbjct: 7 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEH 60
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + A+K+L K+ LEKE V H +R E ++ H +++MY
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 136 YSFQ 139
F
Sbjct: 81 NYFH 84
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+ + + ++DF+ + +G+G FG V L ++K + A+K+L K+ LEKE V H
Sbjct: 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEH 59
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + + A+K+L KA LEK V H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEH 56
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 136 YSFQ 139
F
Sbjct: 78 GYFH 81
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type Complexed With Atp
Length = 303
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
DFE + V+G+GAFG+V + YA+K +R + E+++ + +E +L +H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNH 61
Query: 74 QWVI 77
Q+V+
Sbjct: 62 QYVV 65
Score = 33.1 bits (74), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+G+G FG+V + YA+K +R + E+++ + +E +L +HQ+VV+ Y
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNHQYVVRYY 68
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
DFE + V+G+GAFG+V + YA+K +R + E+++ + +E +L +H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNH 61
Query: 74 QWVI 77
Q+V+
Sbjct: 62 QYVV 65
Score = 33.1 bits (74), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+G+G FG+V + YA+K +R + E+++ + +E +L +HQ+VV+ Y
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNHQYVVRYY 68
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+GRG FGEV Q K TG +YA K L K + +++ E+ +L + +++V +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 136 YSFQS 140
Y+F++
Sbjct: 252 YAFET 256
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAM 44
L+ +G + F +V+GRG FGEV Q K TG +YA
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYAC 215
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+GRG FGEV Q K TG +YA K L K + +++ E+ +L + +++V +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 136 YSFQS 140
Y+F++
Sbjct: 252 YAFET 256
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAM 44
L+ +G + F +V+GRG FGEV Q K TG +YA
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYAC 215
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+GRG FGEV Q K TG +YA K L K + +++ E+ +L + +++V +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 136 YSFQS 140
Y+F++
Sbjct: 252 YAFET 256
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAM 44
L+ +G + F +V+GRG FGEV Q K TG +YA
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYAC 215
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+GRG FGEV Q K TG +YA K L K + +++ E+ +L + +++V +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 136 YSFQS 140
Y+F++
Sbjct: 252 YAFET 256
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAM 44
L+ +G + F +V+GRG FGEV Q K TG +YA
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYAC 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEA 71
++DFE + +G+G FG V L ++K + + A+K+L K+ +EKE V H +R E ++
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ-IEKEGVEHQLRREIEIQAHL 80
Query: 72 DHQWVI 77
H ++
Sbjct: 81 HHPNIL 86
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + + A+K+L K+ +EKE V H +R E ++ H ++++Y
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQ-IEKEGVEHQLRREIEIQAHLHHPNILRLY 89
Query: 136 YSF 138
F
Sbjct: 90 NYF 92
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDFE + +G+G FG V L ++K + A+K+L KA LEK V H
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQ-LEKAGVEH 50
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L ++K + A+K+L KA LEK V H +R E ++ H ++++Y
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 136 YSFQ 139
F
Sbjct: 72 GYFH 75
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 33 VQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKD 92
Q K T ++Y M ++++ A ++ + D + VIGRGV VR +
Sbjct: 64 AQPKGTENLYFQS------MGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRA 117
Query: 93 TGHVYAMKILR-KADMLEKEQVAHVRA----ERDVLVE-ADHQWVVKMYYSFQS 140
TGH +A+KI+ A+ L EQ+ VR E +L + A H ++ + S++S
Sbjct: 118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILR-KADMLEKEQVAHVR 62
++P VIGRG VR + TGH +A+KI+ A+ L EQ+ VR
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR 143
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G G FG+V Q K+T + A K++ D +E++ E D+L DH +VK+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 137 SF 138
+F
Sbjct: 102 AF 103
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 11 LGVEDF-EPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
L EDF E + +G GAFG+V Q K+T + A K++ D +E++ E D+L
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILA 89
Query: 70 EADHQWVI 77
DH ++
Sbjct: 90 SCDHPNIV 97
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G G FG+V Q K+T + A K++ D +E++ E D+L DH +VK+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 137 SF 138
+F
Sbjct: 102 AF 103
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 11 LGVEDF-EPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
L EDF E + +G GAFG+V Q K+T + A K++ D +E++ E D+L
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILA 89
Query: 70 EADHQWVI 77
DH ++
Sbjct: 90 SCDHPNIV 97
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G G FG+V Q K+T + A K++ D +E++ E D+L DH +VK+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 137 SF 138
+F
Sbjct: 102 AF 103
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 11 LGVEDF-EPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
L EDF E + +G GAFG+V Q K+T + A K++ D +E++ E D+L
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILA 89
Query: 70 EADHQWVI 77
DH ++
Sbjct: 90 SCDHPNIV 97
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 26/32 (81%)
Query: 19 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
++V+G GAF EV LV+++ TG ++A+K ++K+
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS 45
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVA--HVRAERDVLVEADHQWVVKM 134
+G G FG+V LV+++ +G +K + K ++ QV + AE +VL DH ++K+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINK----DRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 135 YYSFQ 139
+ F+
Sbjct: 86 FEVFE 90
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVA--HVRAERDVLVEADHQWVI 77
+G GAFG+V LV+++ +G +K + K ++ QV + AE +VL DH +I
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINK----DRSQVPMEQIEAEIEVLKSLDHPNII 83
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G+G FGEV + + T YA+K++ KA K+ +R E ++L + DH ++K++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLF 87
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
E + + ++G+G+FGEV + + T YA+K++ KA K+ +R E ++L + DH
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDH 80
Query: 74 QWVI 77
++
Sbjct: 81 PNIM 84
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G+G FGEV + + T YA+K++ KA K+ +R E ++L + DH ++K++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLF 87
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
E + + ++G+G+FGEV + + T YA+K++ KA K+ +R E ++L + DH
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDH 80
Query: 74 QWVI 77
++
Sbjct: 81 PNIM 84
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 35.4 bits (80), Expect = 0.011, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG+V++ + + TGH A+KIL + + + V +R E L H ++K+Y
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAE 64
+G G FG+V++ + + TGH A+KIL + + + V +R E
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRRE 66
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL--RKADMLEKEQVAHVRAERDVLVEA 71
E++EP +++GRG VR K T YA+KI+ E+V +R L E
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA--TLKEV 61
Query: 72 DHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWV 131
D I R V G ++Q KDT L D+++K ++ E+ L E + + +
Sbjct: 62 D----ILRKVSGHPNIIQLKDTYETNTFFFLV-FDLMKKGELFDYLTEKVTLSEKETRKI 116
Query: 132 VK 133
++
Sbjct: 117 MR 118
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQW 75
FE + +G GAF EV L ++K TG ++A+K + K + KE + + E VL + H+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE--SSIENEIAVLRKIKHEN 81
Query: 76 VIG 78
++
Sbjct: 82 IVA 84
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL--RKADMLEKEQVAHVRAERDVLVEA 71
E++EP +++GRG VR K T YA+KI+ E+V +R L E
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA--TLKEV 74
Query: 72 DHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVE 125
D I R V G ++Q KDT L D+++K ++ E+ L E
Sbjct: 75 D----ILRKVSGHPNIIQLKDTYETNTFFFL-VFDLMKKGELFDYLTEKVTLSE 123
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL--RKADMLEKEQVAHVRAERDVLVEA 71
E++EP +++GRG VR K T YA+KI+ E+V +R L E
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA--TLKEV 74
Query: 72 DHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVE 125
D I R V G ++Q KDT L D+++K ++ E+ L E
Sbjct: 75 D----ILRKVSGHPNIIQLKDTYETNTFFFL-VFDLMKKGELFDYLTEKVTLSE 123
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 60 HVRAERDVLVEADHQWVI----GRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 115
HVR RD+ + + W I G G FG+V + K+TG + A K++ +E++
Sbjct: 2 HVR--RDL--DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELED 54
Query: 116 VRAERDVLVEADHQWVVKM---YY 136
E ++L DH ++VK+ YY
Sbjct: 55 YIVEIEILATCDHPYIVKLLGAYY 78
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 15 DFEPLKV------IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
D +P +V +G GAFG+V + K+TG + A K++ +E++ E ++L
Sbjct: 6 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEIL 62
Query: 69 VEADHQWVI 77
DH +++
Sbjct: 63 ATCDHPYIV 71
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 60 HVRAERDVLVEADHQWVI----GRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 115
HVR RD+ + + W I G G FG+V + K+TG + A K++ +E++
Sbjct: 10 HVR--RDL--DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELED 62
Query: 116 VRAERDVLVEADHQWVVKM---YY 136
E ++L DH ++VK+ YY
Sbjct: 63 YIVEIEILATCDHPYIVKLLGAYY 86
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 15 DFEPLKV------IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 68
D +P +V +G GAFG+V + K+TG + A K++ +E++ E ++L
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEIL 70
Query: 69 VEADHQWVI 77
DH +++
Sbjct: 71 ATCDHPYIV 79
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.7 bits (78), Expect = 0.021, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
++G+G FGEV + + T YA+K++ KA K+ +R E ++L + DH ++K++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLF 87
Score = 32.7 bits (73), Expect = 0.062, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
E + + ++G+G+FGEV + + T YA+K++ KA K+ +R E ++L + DH
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDH 80
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240- >arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240- >arg, Met302->leu) In Complex With
1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240- >arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDF+ + +G+G FG V L +++ + + A+K+L K LEK V H
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQ-LEKAGVEH 57
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L +++ + + A+K+L K LEK V H +R E ++ H ++++Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 136 YSFQ 139
F
Sbjct: 79 GYFH 82
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An
Inhibitor Discovered Through Site-Directed Dynamic
Tethering
Length = 272
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
+EDF+ + +G+G FG V L +++ + + A+K+L K LEK V H
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQ-LEKAGVEH 57
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH-VRAERDVLVEADHQWVVKMY 135
+G+G FG V L +++ + + A+K+L K LEK V H +R E ++ H ++++Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQ-LEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 136 YSFQ 139
F
Sbjct: 79 GYFH 82
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
ED+E L IG G++G + +++K G + K L M E E+ V +E ++L E H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKH 64
Query: 74 QWVI 77
++
Sbjct: 65 PNIV 68
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
ED+E L IG G++G + +++K G + K L M E E+ V +E ++L E H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKH 64
Query: 74 QWVI 77
++
Sbjct: 65 PNIV 68
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.9 bits (76), Expect = 0.029, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+G+G FGEV Q + TG +YA K L K + +++ A E+ +L + + ++VV +
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 136 YSFQS 140
Y++++
Sbjct: 251 YAYET 255
Score = 32.7 bits (73), Expect = 0.062, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAER 65
L+R + F +V+G+G FGEV Q + TG +YA K L K + +++ A E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 66 DVLVEADHQWVI 77
+L + + ++V+
Sbjct: 236 QILEKVNSRFVV 247
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.9 bits (76), Expect = 0.030, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
V+G+G FGEV Q + TG +YA K L K + +++ A E+ +L + + ++VV +
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 136 YSFQS 140
Y++++
Sbjct: 251 YAYET 255
Score = 32.7 bits (73), Expect = 0.062, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 6 LKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAER 65
L+R + F +V+G+G FGEV Q + TG +YA K L K + +++ A E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 66 DVLVEADHQWVI 77
+L + + ++V+
Sbjct: 236 QILEKVNSRFVV 247
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
ED+E L IG G++G + +++K G + K L M E E+ V +E ++L E H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKH 64
Query: 74 QWVI 77
++
Sbjct: 65 PNIV 68
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV--LVE 70
+ DFEP++ +GRG FG V + K YA+K +R L ++A + R+V L +
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR----LPNRELAREKVMREVKALAK 59
Query: 71 ADHQWVI 77
+H ++
Sbjct: 60 LEHPGIV 66
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG+V++ + + TGH A+KIL + + + V ++ E L H ++K+Y
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Score = 28.9 bits (63), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 21 VIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+G G FG+V++ + + TGH A+KIL + + + V ++ E L H +I
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG+V++ + + TGH A+KIL + + + V ++ E L H ++K+Y
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 21 VIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+G G FG+V++ + + TGH A+KIL + + + V ++ E L H +I
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 76 VIGR-GVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
+IG G FG+V Q K+T + A K++ D +E++ E D+L DH +VK+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 135 YYSF 138
+F
Sbjct: 73 LDAF 76
Score = 32.3 bits (72), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 11 LGVEDFEPLKVIGR-GAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLV 69
L EDF ++IG G FG+V Q K+T + A K++ D +E++ E D+L
Sbjct: 8 LNPEDF--WEIIGELGDFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILA 62
Query: 70 EADHQWVI 77
DH ++
Sbjct: 63 SCDHPNIV 70
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 18/133 (13%)
Query: 23 GRGAFGEVRLVQKK-----DTGHVYAMKILRKA-----DMLEKEQVAHVRAERDVLVEAD 72
G G F LV K + A+ + R D+ +Q + +A RD + +
Sbjct: 82 GNGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSK 141
Query: 73 HQWVIGRGVFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEAD 127
+G G GEV+L ++ T A++I+ K E + +V E ++L + +
Sbjct: 142 ---TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 128 HQWVVKMYYSFQS 140
H ++K+ F +
Sbjct: 199 HPCIIKIKNFFDA 211
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQ 74
K +G GA GEV+L ++ T A++I+ K E + +V E ++L + +H
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 75 WVI 77
+I
Sbjct: 201 CII 203
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 33.1 bits (74), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEK---EQVAHVRAERDVLVEADHQWVV 132
IGRG +GEV++ +K T +I R A + K E V + E +++ DH ++
Sbjct: 16 TIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 133 KMYYSFQ 139
++Y +F+
Sbjct: 70 RLYETFE 76
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEK---EQVAHVRAERDVLVEADHQWV 76
IGRG++GEV++ +K T +I R A + K E V + E +++ DH +
Sbjct: 15 NTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 77 IGRGVFGEVRLVQK-KDTGHVY-AMKILRKADMLEKEQVAHVRAERD 121
I RL + +D +Y M++ ++ E+ V H R R+
Sbjct: 69 I--------RLYETFEDNTDIYLVMELCTGGELFER--VVHKRVFRE 105
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEK---EQVAHVRAERDVLVEADHQWVV 132
IGRG +GEV++ +K T +I R A + K E V + E +++ DH ++
Sbjct: 33 TIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 133 KMYYSFQ 139
++Y +F+
Sbjct: 87 RLYETFE 93
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEK---EQVAHVRAERDVLVEADHQWV 76
IGRG++GEV++ +K T +I R A + K E V + E +++ DH +
Sbjct: 32 NTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 77 IGRGVFGEVRLVQK-KDTGHVY-AMKILRKADMLEKEQVAHVRAERD 121
I RL + +D +Y M++ ++ E+ V H R R+
Sbjct: 86 I--------RLYETFEDNTDIYLVMELCTGGELFER--VVHKRVFRE 122
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV--LVE 70
+ DFEP++ +GRG FG V + K YA+K +R L ++A + R+V L +
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR----LPNRELAREKVMREVKALAK 60
Query: 71 ADHQWVI 77
+H ++
Sbjct: 61 LEHPGIV 67
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
IGRG F EV G A+K ++ D+++ + A E D+L + +H V+K Y
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 137 SF 138
SF
Sbjct: 100 SF 101
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+ +++ +K +G G+FG+V+L TG A+KI+ K
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK 48
Score = 32.3 bits (72), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG+V+L TG A+KI+ K + + + + E L H ++K+Y
Sbjct: 20 TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGV 81
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ V+G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 82 FGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D V+ +++ R+ +LE
Sbjct: 85 FFE-------DNDFVFVVLELCRRRSLLE 106
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ VV +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 137 SFQ 139
F+
Sbjct: 85 FFE 87
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+ +++ +K +G G+FG+V+L TG A+KI+ K
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK 49
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG+V+L TG A+KI+ K + + + + E L H ++K+Y
Sbjct: 21 TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGV 81
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ V+G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 82 FGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D V+ +++ R+ +LE
Sbjct: 85 FFE-------DNDFVFVVLELCRRRSLLE 106
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ VV +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 137 SFQ 139
F+
Sbjct: 85 FFE 87
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGV 81
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ V+G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 82 FGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D V+ +++ R+ +LE
Sbjct: 83 FFE-------DNDFVFVVLELCRRRSLLE 104
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ VV +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 137 SFQ 139
F+
Sbjct: 83 FFE 85
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGV 81
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ V+G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 82 FGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D V+ +++ R+ +LE
Sbjct: 89 FFE-------DNDFVFVVLELCRRRSLLE 110
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ VV +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 137 SFQ 139
F+
Sbjct: 89 FFE 91
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From
Yeast Snf1
Length = 274
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+ +++ +K +G G+FG+V+L TG A+KI+ K
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK 43
Score = 32.3 bits (72), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG+V+L TG A+KI+ K + + + + E L H ++K+Y
Sbjct: 15 TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGV 81
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ V+G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 82 FGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D V+ +++ R+ +LE
Sbjct: 107 FFE-------DNDFVFVVLELCRRRSLLE 128
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ VV +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 137 SFQ 139
F+
Sbjct: 107 FFE 109
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4
Kinase Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4
Kinase Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4
Kinase Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4
Kinase Domain Ternary Complex With Amp-Pnp And P38
Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQ 57
ED + L IGRGA+G V + K +G + A+K +R + + EKEQ
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR-STVDEKEQ 64
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain
Of The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+ +++ +K +G G+FG+V+L TG A+KI+ K
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK 39
Score = 32.3 bits (72), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G FG+V+L TG A+KI+ K + + + + E L H ++K+Y
Sbjct: 11 TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQ 74
K +G GA GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 75 WVI 77
+I
Sbjct: 76 CII 78
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQW 130
+G G GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 131 VVKMYYSFQS 140
++K+ F +
Sbjct: 77 IIKIKNFFDA 86
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex
With Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex
With Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex
With Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQ 74
K +G GA GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 75 WVI 77
+I
Sbjct: 76 CII 78
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQW 130
+G G GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 131 VVKMYYSFQS 140
++K+ F +
Sbjct: 77 IIKIKNFFDA 86
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 32.3 bits (72), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQ 74
K +G GA GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 75 WVI 77
+I
Sbjct: 76 CII 78
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQW 130
+G G GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 131 VVKMYYSFQS 140
++K+ F +
Sbjct: 77 IIKIKNFFDA 86
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 32.3 bits (72), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGV 81
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ V+G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 82 FGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D V+ +++ R+ +LE
Sbjct: 109 FFE-------DNDFVFVVLELCRRRSLLE 130
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A KI+ K+ +L+ Q + E + HQ VV +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 137 SFQ 139
F+
Sbjct: 109 FFE 111
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 32.3 bits (72), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQ 74
K +G GA GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 75 WVI 77
+I
Sbjct: 82 CII 84
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQW 130
+G G GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 23 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 131 VVKMYYSFQS 140
++K+ F +
Sbjct: 83 IIKIKNFFDA 92
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 32.3 bits (72), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQ 74
K +G GA GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 75 WVI 77
+I
Sbjct: 75 CII 77
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQW 130
+G G GEV+L ++ T A+KI+ K E + +V E ++L + +H
Sbjct: 16 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 131 VVKMYYSFQS 140
++K+ F +
Sbjct: 76 IIKIKNFFDA 85
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 32.3 bits (72), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGR 79
+ +G+G F + + DT V+A K++ K+ +L+ Q + E + D+ V+G
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 80 GVFGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D VY ++I R+ +LE
Sbjct: 92 HGFFE-------DDDFVYVVLEICRRRSLLE 115
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A K++ K+ +L+ Q + E + D+ VV +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 137 SFQ 139
F+
Sbjct: 94 FFE 96
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 32.3 bits (72), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKAD 51
+E +E L ++G G++G V + KDTG + A+K ++D
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD 62
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKAD 106
++G G +G V + KDTG + A+K ++D
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESD 62
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGR 79
+ +G+G F + + DT V+A K++ K+ +L+ Q + E + D+ V+G
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 80 GVFGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D VY ++I R+ +LE
Sbjct: 108 HGFFE-------DDDFVYVVLEICRRRSLLE 131
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A K++ K+ +L+ Q + E + D+ VV +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 137 SFQ 139
F+
Sbjct: 110 FFE 112
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGR 79
+ +G+G F + + DT V+A K++ K+ +L+ Q + E + D+ V+G
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 80 GVFGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D VY ++I R+ +LE
Sbjct: 108 HGFFE-------DDDFVYVVLEICRRRSLLE 131
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A K++ K+ +L+ Q + E + D+ VV +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 137 SFQ 139
F+
Sbjct: 110 FFE 112
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGR 79
+ +G+G F + + DT V+A K++ K+ +L+ Q + E + D+ V+G
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 80 GVFGEVRLVQKKDTGHVY-AMKILRKADMLE 109
F E D VY ++I R+ +LE
Sbjct: 108 HGFFE-------DDDFVYVVLEICRRRSLLE 131
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G+G F + + DT V+A K++ K+ +L+ Q + E + D+ VV +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 137 SFQ 139
F+
Sbjct: 110 FFE 112
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
G+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 72 DHQWVI 77
+H ++
Sbjct: 60 NHPNIV 65
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR 62
+ +EP+ IG GA+G V + +GH A+K +R + E ++ VR
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR 62
+ +EP+ IG GA+G V + +GH A+K +R + E ++ VR
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR 62
+EP+ IG GA+G V + +GH A+K +R + E ++ VR
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 71 ADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILR 103
A HQ +GRG FGEV ++ K TG A+K +R
Sbjct: 95 ATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVR 127
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+GRG+FGEV ++ K TG A+K +R
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR 127
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 71 ADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILR 103
A HQ +GRG FGEV ++ K TG A+K +R
Sbjct: 76 ATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVR 108
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+GRG+FGEV ++ K TG A+K +R
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR 108
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA-DHQWVVKMY 135
+G G G+V ++ + TGHV A+K +R++ KE+ + + DV++++ D ++V+ +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSG--NKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 136 YSF 138
+F
Sbjct: 91 GTF 93
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA- 71
+ D E L +G G G+V ++ + TGHV A+K +R++ KE+ + + DV++++
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG--NKEENKRILMDLDVVLKSH 81
Query: 72 DHQWVI 77
D +++
Sbjct: 82 DCPYIV 87
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 67
++++ + IG+GAF VR K TGH YA KI+ + ++ H + ER+
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD---HQKLEREA 54
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 122
IG+G F VR K TGH YA KI+ + ++ H + ER+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD---HQKLEREA 54
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 18/127 (14%)
Query: 19 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIG 78
L+ IG G+FG+ LV+ + G Y +K + + M KE+ R E VL H ++
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER-EESRREVAVLANMKHPNIVQ 87
Query: 79 -RGVFGEVRLVQKKDTGHVY-AMKILRKADMLEKEQVAHVRAERDVLVEADH--QWVVKM 134
R F E G +Y M D+ ++ + A++ VL + D W V++
Sbjct: 88 YRESFEE--------NGSLYIVMDYCEGGDLFKR-----INAQKGVLFQEDQILDWFVQI 134
Query: 135 YYSFQSV 141
+ + V
Sbjct: 135 CLALKHV 141
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 32/138 (23%)
Query: 22 IGRGAFGEVRLV----QKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+G G FG+V L + +TG A+K L+ +A ++ E ++L H+ ++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 74
Query: 78 ----------GRGV--------FGEVRLVQKKDTGHV-------YAMKILRKADMLEKEQ 112
G G+ G ++ K+ + YA++I + D L Q
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 113 VAHVR-AERDVLVEADHQ 129
H A R+VLVE++HQ
Sbjct: 135 YVHRDLAARNVLVESEHQ 152
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 42 YAMKILRKADMLEKEQVAHVR-AERDVLVEADHQWVIGRGVFGEVRLVQ 89
YA++I + D L Q H A R+VLVE++HQ IG FG + ++
Sbjct: 119 YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD--FGLTKAIE 165
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 32/138 (23%)
Query: 22 IGRGAFGEVRLV----QKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVI 77
+G G FG+V L + +TG A+K L+ +A ++ E ++L H+ ++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 86
Query: 78 ----------GRGV--------FGEVRLVQKKDTGHV-------YAMKILRKADMLEKEQ 112
G G+ G ++ K+ + YA++I + D L Q
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 113 VAHVR-AERDVLVEADHQ 129
H A R+VLVE++HQ
Sbjct: 147 YVHRDLAARNVLVESEHQ 164
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 42 YAMKILRKADMLEKEQVAHVR-AERDVLVEADHQWVIGRGVFGEVRLVQ 89
YA++I + D L Q H A R+VLVE++HQ IG FG + ++
Sbjct: 131 YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD--FGLTKAIE 177
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.6 bits (70), Expect = 0.16, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 3 FLRLKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
++R K ++G E + ++ +G GA+GEV L ++K+ A+K+++K+
Sbjct: 26 YVRKKEGKIG-ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKS 72
Score = 25.8 bits (55), Expect = 9.1, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADM-----------LEKEQVAHVRAERDVLVE 125
+G G +GEV L ++K+ A+K+++K+ +EK + E +L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH-EEIYNEISLLKS 102
Query: 126 ADHQWVVKMYYSFQ 139
DH ++K++ F+
Sbjct: 103 LDHPNIIKLFDVFE 116
>pdb|2X89|A Chain A, Structure Of The Beta2_microglobulin Involved In
Amyloidogenesis
pdb|2X89|B Chain B, Structure Of The Beta2_microglobulin Involved In
Amyloidogenesis
pdb|2X89|C Chain C, Structure Of The Beta2_microglobulin Involved In
Amyloidogenesis
Length = 128
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Query: 26 AFGEVRLVQKKD--TGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGVFG 83
A G +RL T Y M R+A E+E VA + + RD+ AD V GR F
Sbjct: 14 AGGSLRLSCAASGYTDSRYCMAWFRQAPGKEREWVARINSGRDITYYADS--VKGRFTFS 71
Query: 84 EVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 122
+ K+T + + D LE E A D+
Sbjct: 72 Q---DNAKNT-------VYLQMDSLEPEDTATYYCATDI 100
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADML 53
IG+G++G V+L ++ YAMK+L K ++
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLI 52
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADML 108
IG+G +G V+L ++ YAMK+L K ++
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLI 52
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
K +GRG F VR K TG YA K L+K
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKK 64
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRK 104
+GRG F VR K TG YA K L+K
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKK 64
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
+E +VIG+GAF VR ++TG +A+KI+
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIV 57
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 63 AERDVLVEADHQW--VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVA--HVRA 118
A+ DVL E ++ VIG+G F VR ++TG +A+KI+ A ++ ++
Sbjct: 16 ADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 119 ERDVLVEADHQWVVKMYYSFQS 140
E + H +V++ ++ S
Sbjct: 76 EASICHMLKHPHIVELLETYSS 97
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK-----------ADMLEK 55
K+ L F ++ +G G FG V L Q D YA+K++R AD+L+K
Sbjct: 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKK 87
Query: 56 EQVAHVRAERDV-----LVEADHQWVI----GRGVFGEVRLVQKKDTGHV-----YAMKI 101
Q + V + DH +I G ++ E+ + H+ Y ++I
Sbjct: 88 IQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLY-EIITRNNYNGFHIEDIKLYCIEI 146
Query: 102 LRKADMLEKEQVAHV 116
L+ + L K + H
Sbjct: 147 LKALNYLRKMSLTHT 161
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVL 123
+G G FG V L Q D YA+K++R K+ + E D+L
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADIL 85
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG G F +V+L TG + A+KI+ K + + ++ E + L HQ + ++Y
Sbjct: 17 TIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQHICQLY 74
Query: 136 YSFQS 140
+ ++
Sbjct: 75 HVLET 79
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQW 75
+E + IG G F +V+L TG + A+KI+ K + + ++ E + L HQ
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQH 69
Query: 76 VI 77
+
Sbjct: 70 IC 71
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 63 AERDVLVEADHQW--VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH--VRA 118
A+ DVL E ++ VIG+G F VR ++TG +A+KI+ A ++ ++
Sbjct: 18 ADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 77
Query: 119 ERDVLVEADHQWVVKMYYSFQS 140
E + H +V++ ++ S
Sbjct: 78 EASICHMLKHPHIVELLETYSS 99
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
+E +VIG+G F VR ++TG +A+KI+
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV 59
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G G +GEV L + K T A+KI+RK + + + E VL DH ++K+Y
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 137 SFQ 139
F+
Sbjct: 104 FFE 106
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 3 FLRLKRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
F+ K+ L E ++ +K +G GA+GEV L + K T A+KI+RK
Sbjct: 27 FITSKKGHLS-EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKT 73
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 63 AERDVLVEADHQW--VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVA--HVRA 118
A+ DVL E ++ VIG+G F VR ++TG +A+KI+ A ++ ++
Sbjct: 16 ADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 119 ERDVLVEADHQWVVKMYYSFQS 140
E + H +V++ ++ S
Sbjct: 76 EASICHMLKHPHIVELLETYSS 97
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
+E +VIG+G F VR ++TG +A+KI+
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV 57
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 30.4 bits (67), Expect = 0.33, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR 62
+E LKVIG+G+FG+V A+K++R ++ +R
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR 145
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILR 48
+D EP+ +GRGA+G V ++ +G + A+K +R
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR 41
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6
In A Putative Auto-Inhibition State
Length = 340
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILR 48
+D EP+ +GRGA+G V ++ +G + A+K +R
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR 85
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 67
+ +EP+ IG GA+G V + +GH A+K +R + + R+V
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An
Autoinhibitory Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An
Autoinhibitory Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An
Autoinhibitory Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An
Autoinhibitory Dimer
Length = 316
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQ 57
+D EP+ +GRGA+G V + +G + A+K +R A + +EQ
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR-ATVNSQEQ 76
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEICINAMLNHENVV 68
Query: 133 KMY 135
K Y
Sbjct: 69 KFY 71
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEICINKMLNHENVV 67
Query: 133 KMY 135
K Y
Sbjct: 68 KFY 70
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 73 HQWVIGRGVFGEVRLVQKKDTGHVYAMKILR 103
HQ +GRG FGEV ++ K TG A+K +R
Sbjct: 78 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR 108
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+GRG+FGEV ++ K TG A+K +R
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR 108
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEIXINKMLNHENVV 67
Query: 133 KMY 135
K Y
Sbjct: 68 KFY 70
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 38
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 12 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEICINKMLNHENVV 66
Query: 133 KMY 135
K Y
Sbjct: 67 KFY 69
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEIXINKMLNHENVV 68
Query: 133 KMY 135
K Y
Sbjct: 69 KFY 71
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human
Chk1 Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human
Chk1 Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human
Chk1 Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human
Chk1 Kinase Domain
Length = 273
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEICINKMLNHENVV 68
Query: 133 KMY 135
K Y
Sbjct: 69 KFY 71
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEIXINKMLNHENVV 67
Query: 133 KMY 135
K Y
Sbjct: 68 KFY 70
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 73 HQWVIGRGVFGEVRLVQKKDTGHVYAMKILR 103
HQ +GRG FGEV ++ K TG A+K +R
Sbjct: 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR 92
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+GRG+FGEV ++ K TG A+K +R
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR 92
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor
Binding Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor
Binding Site
Length = 271
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 39
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active
Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 72 DHQWVI 77
+H ++
Sbjct: 61 NHPNIV 66
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 68
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEICINKMLNHENVV 68
Query: 133 KMY 135
K Y
Sbjct: 69 KFY 71
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle
Checkpoint Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEICINKMLNHENVV 68
Query: 133 KMY 135
K Y
Sbjct: 69 KFY 71
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 72 DHQWVI 77
+H ++
Sbjct: 61 NHPNIV 66
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 68
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As
Potent Chk1 Inhibitors
Length = 295
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA+GEV+L + T A+KI+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEICINKMLNHENVV 68
Query: 133 KMY 135
K Y
Sbjct: 69 KFY 71
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 72 DHQWVI 77
+H ++
Sbjct: 63 NHPNIV 68
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 70
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 72 DHQWVI 77
+H ++
Sbjct: 62 NHPNIV 67
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 69
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 72 DHQWVI 77
+H ++
Sbjct: 61 NHPNIV 66
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 68
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin
B
Length = 289
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 72 DHQWVI 77
+H ++
Sbjct: 60 NHPNIV 65
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With
Inhibitor 38
Length = 322
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL---RKADMLEK 55
VED++ ++ +G GA+GEV+L + T A+KI+ R D E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN 50
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVAHVRAERDVLVEADHQWVV 132
+G G +GEV+L + T A+KI+ R D E +++ E + +H+ VV
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-----NIKKEICINKMLNHENVV 67
Query: 133 KMY 135
K Y
Sbjct: 68 KFY 70
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 72 DHQWVI 77
+H ++
Sbjct: 63 NHPNIV 68
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 70
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 63
Query: 72 DHQWVI 77
+H ++
Sbjct: 64 NHPNIV 69
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 71
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 72 DHQWVI 77
+H ++
Sbjct: 62 NHPNIV 67
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 69
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 72 DHQWVI 77
+H ++
Sbjct: 63 NHPNIV 68
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 70
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 72 DHQWVI 77
+H ++
Sbjct: 60 NHPNIV 65
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 30.0 bits (66), Expect = 0.51, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 51 DMLEKEQVAHVRAERDVLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRK-----A 105
D+ +Q + +A RD + + +G G GEV+L ++ T A++I+ K
Sbjct: 134 DLTVDDQSVYPKALRDEYIMSK---TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIG 190
Query: 106 DMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQS 140
E + +V E ++L + +H ++K+ F +
Sbjct: 191 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 225
Score = 28.9 bits (63), Expect = 1.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK-----ADMLEKEQVAHVRAERDVLVEADHQ 74
K +G GA GEV+L ++ T A++I+ K E + +V E ++L + +H
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 75 WVI 77
+I
Sbjct: 215 CII 217
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 72 DHQWVI 77
+H ++
Sbjct: 63 NHPNIV 68
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 70
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 72 DHQWVI 77
+H ++
Sbjct: 62 NHPNIV 67
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 69
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 72 DHQWVI 77
+H ++
Sbjct: 61 NHPNIV 66
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 68
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 72 DHQWVI 77
+H ++
Sbjct: 62 NHPNIV 67
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 69
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 72 DHQWVI 77
+H ++
Sbjct: 60 NHPNIV 65
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 72 DHQWVI 77
+H ++
Sbjct: 63 NHPNIV 68
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 70
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+EDF+ ++G+G+F V + TG A+K++ K M + V V+ E + +
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 73 HQWVI 77
H ++
Sbjct: 70 HPSIL 74
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 67
++++ + +G+GAF VR K TG YA KI+ + ++ H + ER+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD---HQKLEREA 54
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 122
+G+G F VR K TG YA KI+ + ++ H + ER+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD---HQKLEREA 54
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 299
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 72 DHQWVI 77
+H ++
Sbjct: 60 NHPNIV 65
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 29.6 bits (65), Expect = 0.55, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR 62
+E LKVIG+G FG+V A+K++R ++ +R
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR 145
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 67
Query: 73 HQWVI 77
H ++
Sbjct: 68 HPNIV 72
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 74
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 72 DHQWVI 77
+H ++
Sbjct: 63 NHPNIV 68
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 70
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 73 HQWVI 77
H ++
Sbjct: 61 HPNIV 65
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 GVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 71
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 72 DHQWVI 77
+H ++
Sbjct: 60 NHPNIV 65
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 73 HQWVIGRGVFGEVRLVQKKDTGHVYAMKILR 103
HQ +GRG FGEV ++ K TG A+K +R
Sbjct: 76 HQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR 106
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+GRG+FGEV ++ K TG A+K +R
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR 106
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 67
Query: 73 HQWVI 77
H ++
Sbjct: 68 HPNIV 72
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 74
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 73 HQWVI 77
H ++
Sbjct: 61 HPNIV 65
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr
160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 73 HQWVI 77
H ++
Sbjct: 61 HPNIV 65
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 73 HQWVI 77
H ++
Sbjct: 60 HPNIV 64
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 66
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 73 HQWVI 77
H ++
Sbjct: 62 HPNIV 66
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 68
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 67
++++ + +G+GAF VR K TG YA KI+ + ++ H + ER+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD---HQKLEREA 54
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV 122
+G+G F VR K TG YA KI+ + ++ H + ER+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD---HQKLEREA 54
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Dph- 042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Din- 234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With
Din- 232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With
Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor
Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 73 HQWVI 77
H ++
Sbjct: 60 HPNIV 64
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 66
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 73 HQWVI 77
H ++
Sbjct: 60 HPNIV 64
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 66
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 64
Query: 73 HQWVI 77
H ++
Sbjct: 65 HPNIV 69
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 71
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 73 HQWVI 77
H ++
Sbjct: 60 HPNIV 64
Score = 28.9 bits (63), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 66
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMK-----ILRKADMLEKEQVAHVRAERDV--LVEADH 128
+G G FG+V+L T A+K +L+K+DM H+R ER++ L H
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM-------HMRVEREISYLKLLRH 68
Query: 129 QWVVKMY 135
++K+Y
Sbjct: 69 PHIIKLY 75
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK-----ILRKADMLEKEQVAHVRAERDV 67
+ +G G+FG+V+L T A+K +L+K+DM H+R ER++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM-------HMRVEREI 60
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
E+F+ ++ IG G +G V + K TG V A+K +R E +R E +L E +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 74 QWVI 77
++
Sbjct: 61 PNIV 64
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+K +R E +R E +L E +H +VK+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 66
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 7 KRSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMK 45
+RSR ++ F+ ++ G+G FG V+L ++K TG A+K
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK 54
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 78 GRGVFGEVRLVQKKDTGHVYAMK 100
G+G FG V+L ++K TG A+K
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIK 54
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1
(Pkmyt1)
Length = 311
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMK 45
+ F+ L +G G++GEV V+ K+ G +YA+K
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK 88
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMK 100
+G G +GEV V+ K+ G +YA+K
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVK 88
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
Length = 319
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 11 LGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM 52
L + ++ LK IG+G F +V+L + TG A+KI+ K +
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL 45
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G F +V+L + TG A+KI+ K L + + E ++ +H +VK++
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLF 72
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 66 DVLVEADHQWVIGR----GVFGEVRLVQKKDTGHVY---AMKILRKADMLEKEQVAHVRA 118
DVL+ + Q+ +GR G FG VR Q K + A+K+L KAD++ +
Sbjct: 17 DVLI-PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLR 74
Query: 119 ERDVLVEADHQWVVKM 134
E + E DH V K+
Sbjct: 75 EAACMKEFDHPHVAKL 90
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVY---AMKILRKADMLEKEQVAHVRAERDVLVEADHQWV 76
+++G+G FG VR Q K + A+K+L KAD++ + E + E DH V
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEFDHPHV 87
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 28.9 bits (63), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM 52
+ ++ LK IG+G F +V+L + TG A+KI+ K +
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL 53
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G F +V+L + TG A+KI+ K L + + E ++ +H +VK++
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLF 80
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM 52
+ ++ LK IG+G F +V+L + TG A+KI+ K +
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL 50
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G F +V+L + TG A+KI+ K L + + E ++ +H +VK++
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLF 77
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 27/96 (28%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADH 73
E F+ L+ +G G++G V K+TG + A+K V VE+D
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK--------------------QVPVESDL 68
Query: 74 QWVIGRGVFGEVRLVQKKDTGHV--YAMKILRKADM 107
Q +I E+ ++Q+ D+ HV Y + D+
Sbjct: 69 QEII-----KEISIMQQCDSPHVVKYYGSYFKNTDL 99
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMK-ILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
+G G +G V K+TG + A+K + ++D+ E + E ++ + D VVK Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE------IIKEISIMQQCDSPHVVKYY 90
Query: 136 YSF 138
S+
Sbjct: 91 GSY 93
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERD 66
+D++ + +G+GAF VR KK YA KI+ + ++ H + ER+
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD---HQKLERE 80
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM 52
+ ++ LK IG+G F +V+L + TG A+KI+ K +
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL 52
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G F +V+L + TG A+KI+ K L + + E ++ +H +VK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLF 79
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 73 HQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKAD 106
H V+G+G FG+ V ++TG V MK L + D
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD 47
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKAD 51
+V+G+G FG+ V ++TG V MK L + D
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFD 47
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERD--VLVEA 71
DF+ ++G GA+G V K TG + A+K K + +K A +R R+ +L
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK---KIEPFDKPLFA-LRTLREIKILKHF 66
Query: 72 DHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ +I +F R ++ VY ++ L + D+
Sbjct: 67 KHENII--TIFNIQRPDSFENFNEVYIIQELMQTDL 100
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM 52
+ ++ LK IG+G F +V+L + TG A+KI+ K +
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL 52
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G F +V+L + TG A+KI+ K L + + E ++ +H +VK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLF 79
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM 52
+ ++ LK IG+G F +V+L + TG A+KI+ K +
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL 52
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G F +V+L + TG A+KI+ K L + + E ++ +H +VK++
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLF 79
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM 52
+ ++ LK IG+G F +V+L + TG A+KI+ K +
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL 52
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERD--VLVEA 71
DF+ ++G GA+G V K TG + A+K K + +K A +R R+ +L
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK---KIEPFDKPLFA-LRTLREIKILKHF 66
Query: 72 DHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ +I +F R ++ VY ++ L + D+
Sbjct: 67 KHENII--TIFNIQRPDSFENFNEVYIIQELMQTDL 100
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated
Protein Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated
Protein Kinase Domain
Length = 387
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 19 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAH 60
L+ +G GAFG V +K TG V+ K + L+K V +
Sbjct: 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN 97
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYY 136
+G G FG V +K TG V+ K + L+K V+ E ++ + H ++ ++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHHPKLINLHD 115
Query: 137 SFQ 139
+F+
Sbjct: 116 AFE 118
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERD--VLVEA 71
DF+ ++G GA+G V K TG + A+K K + +K A +R R+ +L
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK---KIEPFDKPLFA-LRTLREIKILKHF 66
Query: 72 DHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ +I +F R ++ VY ++ L + D+
Sbjct: 67 KHENII--TIFNIQRPDSFENFNEVYIIQELMQTDL 100
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQW 75
FE +GRGA V ++K T YA+K+L+K ++K+ VR E VL+ H
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKI---VRTEIGVLLRLSHPN 109
Query: 76 VI 77
+I
Sbjct: 110 II 111
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 28.1 bits (61), Expect = 1.9, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
VL D +G G FG V V ++ TG+ +A K + +KE VR E +
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET---VRKEIQTMSVL 211
Query: 127 DHQWVVKMYYSFQ 139
H +V ++ +F+
Sbjct: 212 RHPTLVNLHDAFE 224
Score = 26.9 bits (58), Expect = 3.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV 58
+G GAFG V V ++ TG+ +A K + +KE V
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV 201
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMK 45
+E +E + IG G++G V + +DTG + A+K
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK 34
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADM--LEKEQVAHVRAERDVLVEADHQWVVKM 134
IG+G +G VR+ + T + A+KI+ K + + + V ++ E ++ + H + ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 135 Y 135
Y
Sbjct: 94 Y 94
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKIL 47
VED++ ++ +G GA GEV+L + T A+KI+
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV 39
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRK 104
+G GVF V+ ++K TG YA K ++K
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKK 46
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint
And Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMK 45
V +E L IG+G FGEV + + TG A+K
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK 49
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMK 45
V +E L IG+G FGEV + + TG A+K
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK 49
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human
P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMK 45
V +E L IG+G FGEV + + TG A+K
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK 48
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 83
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R +++ + VY + L AD+
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFND--VYLVTHLMGADL 119
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+ +R E +R E +L E +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 73 HQWVI 77
H ++
Sbjct: 61 HPNIV 65
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+ +R E +R E +L E +H +VK+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 67
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV-- 67
R G+ DF+ +++IG G FG+V + + G Y +K ++ + +AER+V
Sbjct: 8 RFGM-DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK---------YNNEKAEREVKA 57
Query: 68 LVEADH 73
L + DH
Sbjct: 58 LAKLDH 63
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEAD 72
+E+F+ ++ IG G +G V + K TG V A+ +R E +R E +L E +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 73 HQWVI 77
H ++
Sbjct: 60 HPNIV 64
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKM 134
IG G +G V + K TG V A+ +R E +R E +L E +H +VK+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKL 66
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 67 VLVEADHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEA 126
VL D +G G FG V V ++ TG+ +A K + +KE VR E +
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET---VRKEIQTMSVL 105
Query: 127 DHQWVVKMYYSFQ 139
H +V ++ +F+
Sbjct: 106 RHPTLVNLHDAFE 118
Score = 26.9 bits (58), Expect = 4.1, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV 58
+G GAFG V V ++ TG+ +A K + +KE V
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV 95
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 13 VEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMK 45
V +E L IG+G FGEV + + TG A+K
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK 49
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K + + + ++ +R + DH +V++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 136 YSFQS 140
Y F S
Sbjct: 80 YFFYS 84
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK 51
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K + + + ++ +R + DH +V++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 136 YSFQS 140
Y F S
Sbjct: 80 YFFYS 84
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK 51
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K + + + ++ +R + DH +V++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 136 YSFQS 140
Y F S
Sbjct: 80 YFFYS 84
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK 51
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 97
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R +++ + VY + L AD+
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFND--VYLVTHLMGADL 133
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 97
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R +++ + VY + L AD+
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFND--VYLVTHLMGADL 133
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 77
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R ++ + VY + L AD+
Sbjct: 78 MKHENVIGLLDVFTPARSLE--EFNDVYLVTHLMGADL 113
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 77
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R ++ + VY + L AD+
Sbjct: 78 MKHENVIGLLDVFTPARSLE--EFNDVYLVTHLMGADL 113
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 96
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R +++ + VY + L AD+
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFND--VYLVTHLMGADL 132
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 8 RSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
+SR E F L+ IG G FG V K+ G +YA+K +K
Sbjct: 4 KSRYTTE-FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP 45
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 77
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R ++ + VY + L AD+
Sbjct: 78 MKHENVIGLLDVFTPARSLE--EFNDVYLVTHLMGADL 113
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 77
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R ++ + VY + L AD+
Sbjct: 78 MKHENVIGLLDVFTPARSLE--EFNDVYLVTHLMGADL 113
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 8 RSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
+SR E F L+ IG G FG V K+ G +YA+K +K
Sbjct: 4 KSRYTTE-FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP 45
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 73
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R +++ + VY + L AD+
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFND--VYLVTHLMGADL 109
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 73
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R +++ + VY + L AD+
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFND--VYLVTHLMGADL 109
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 73
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R +++ + VY + L AD+
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFND--VYLVTHLMGADL 109
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 8 RSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
+SR E F L+ IG G FG V K+ G +YA+K +K
Sbjct: 2 KSRYTTE-FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP 43
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 21 VIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKE 56
V+G GAF EV L + K T + A+K + K + KE
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKE 111
V+G G F EV L + K T + A+K + K + KE
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 8 RSRLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
+SR E F L+ IG G FG V K+ G +YA+K +K
Sbjct: 6 KSRYTTE-FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP 47
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 21 VIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKE 56
V+G GAF EV L + K T + A+K + K + KE
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 72 DHQWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKE 111
D + V+G G F EV L + K T + A+K + K + KE
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 21 VIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKE 56
V+G GAF EV L + K T + A+K + K + KE
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKE 111
V+G G F EV L + K T + A+K + K + KE
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G FGEV T V A+KI+ D+ ++++ ++ E VL + D +V K Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKII---DLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 136 YSF 138
S+
Sbjct: 88 GSY 90
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 74 QWVIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVK 133
Q IG+G F +V+L + TG A+KI+ K L + + E ++ +H +VK
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKT-QLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 134 MY 135
++
Sbjct: 79 LF 80
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM 52
K IG+G F +V+L + TG A+KI+ K +
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL 53
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 21 VIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKE 56
V+G GAF EV L + K T + A+K + K + KE
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE 60
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 26.9 bits (58), Expect = 3.6, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K + + + ++ +R + DH +V++
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 117
Query: 136 YSFQS 140
Y F S
Sbjct: 118 YFFYS 122
Score = 25.8 bits (55), Expect = 8.1, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIK 89
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 26.9 bits (58), Expect = 3.6, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K + + + ++ +R + DH +V++
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 113
Query: 136 YSFQS 140
Y F S
Sbjct: 114 YFFYS 118
Score = 25.8 bits (55), Expect = 8.1, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIK 85
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 26.9 bits (58), Expect = 3.6, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K + + + ++ +R + DH +V++
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 158
Query: 136 YSFQS 140
Y F S
Sbjct: 159 YFFYS 163
Score = 25.8 bits (55), Expect = 8.1, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIK 130
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR---AERDVLVE 70
E ++ L +G GA+G V TGH A+K L + + + H + E +L
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP----FQSIIHAKRTYRELRLLKH 87
Query: 71 ADHQWVIG-RGVFGEVRLVQKKDTGHVYAMKILRKADM 107
H+ VIG VF R ++ + VY + L AD+
Sbjct: 88 MKHENVIGLLDVFTPARSLE--EFNDVYLVTHLMGADL 123
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse
Dapk2 In Complex With Amp
Length = 361
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 13 VEDFEPL-KVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
VEDF + + +G G F V+ ++K TG YA K ++K
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK 47
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK 51
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 79
Query: 136 YSFQS 140
Y F S
Sbjct: 80 YFFYS 84
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 13 VEDFEPL-KVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
VEDF + + +G G F V+ ++K TG YA K ++K
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK 47
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK 51
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 79
Query: 136 YSFQS 140
Y F S
Sbjct: 80 YFFYS 84
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIK 52
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 80
Query: 136 YSFQS 140
Y F S
Sbjct: 81 YFFYS 85
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 13 VEDFEPL-KVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
VEDF + + +G G F V+ ++K TG YA K ++K
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK 47
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK 51
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 79
Query: 136 YSFQS 140
Y F S
Sbjct: 80 YFFYS 84
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b
Inhibitor That Attenuates Hyperactivity In Clock Mutant
Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b
Inhibitor That Attenuates Hyperactivity In Clock Mutant
Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK 51
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 79
Query: 136 YSFQS 140
Y F S
Sbjct: 80 YFFYS 84
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 13 VEDFEPL-KVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
VEDF + + +G G F V+ ++K TG YA K ++K
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK 47
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIK 70
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 98
Query: 136 YSFQS 140
Y F S
Sbjct: 99 YFFYS 103
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
+++E ++ IG GA+G V +++ TG A+K + A
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA 91
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIK 56
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 84
Query: 136 YSFQS 140
Y F S
Sbjct: 85 YFFYS 89
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA 50
+++E ++ IG GA+G V +++ TG A+K + A
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA 90
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIK 59
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 87
Query: 136 YSFQS 140
Y F S
Sbjct: 88 YFFYS 92
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 13 VEDFEPL-KVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
VEDF + + +G G F V+ ++K TG YA K ++K
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK 47
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIK 63
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 91
Query: 136 YSFQS 140
Y F S
Sbjct: 92 YFFYS 96
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIK 64
Score = 25.8 bits (55), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 92
Query: 136 YSFQS 140
Y F S
Sbjct: 93 YFFYS 97
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G FGEV T V A+KI+ D+ ++++ ++ E VL + D +V K Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 136 YSF 138
S+
Sbjct: 92 GSY 94
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 16 FEPLKVIGRGAFGE-VRLVQKKDTGHVYAMKILRKADMLEKEQVAHVR 62
+E LKVIG+G+FG+ V+ K HV A+K++R ++ +R
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHV-ALKMVRNEKRFHRQAAEEIR 145
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIK 63
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 91
Query: 136 YSFQS 140
Y F S
Sbjct: 92 YFFYS 96
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIK 55
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 76 VIGRGVFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMY 135
VIG G FG V + D+G + A+K +L+ ++ + E ++ + DH +V++
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLR 83
Query: 136 YSFQS 140
Y F S
Sbjct: 84 YFFYS 88
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly
Ligand Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly
Ligand Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIK 79
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 25 GAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGVFGE 84
AFG +++ + KD V + ++V++ + VIG G FG
Sbjct: 15 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK-----------VIGNGSFGV 63
Query: 85 VRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQS 140
V + D+G + A+K +L+ ++ + E ++ + DH +V++ Y F S
Sbjct: 64 VYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYS 112
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 25 GAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGVFGE 84
AFG +++ + KD V + ++V++ + VIG G FG
Sbjct: 23 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK-----------VIGNGSFGV 71
Query: 85 VRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQS 140
V + D+G + A+K +L+ ++ + E ++ + DH +V++ Y F S
Sbjct: 72 VYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYS 120
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIK 87
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 25 GAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVIGRGVFGE 84
AFG +++ + KD V + ++V++ + VIG G FG
Sbjct: 21 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK-----------VIGNGSFGV 69
Query: 85 VRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQS 140
V + D+G + A+K +L+ ++ + E ++ + DH +V++ Y F S
Sbjct: 70 VYQAKLCDSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYS 118
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 20 KVIGRGAFGEVRLVQKKDTGHVYAMK 45
KVIG G+FG V + D+G + A+K
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIK 85
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G FGEV T V A+KI+ D+ ++++ ++ E VL + D +V K Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 136 YSF 138
S+
Sbjct: 87 GSY 89
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G FGEV T V A+KI+ D+ ++++ ++ E VL + D +V K Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 136 YSF 138
S+
Sbjct: 72 GSY 74
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Query: 10 RLGVEDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV-- 67
R G+ DF+ +++IG G FG+V + + G Y ++ ++ + +AER+V
Sbjct: 9 RFGM-DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK---------YNNEKAEREVKA 58
Query: 68 LVEADH 73
L + DH
Sbjct: 59 LAKLDH 64
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 13 VEDFEPL-KVIGRGAFGEVRLVQKKDTGHVYAMKILRK 49
VEDF + + +G G F V+ ++K TG YA K ++K
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK 47
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 77 IGRGVFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVAHVRAERDVLVEADHQWVVKMY 135
IG+G FGEV T V A+KI+ D+ ++++ ++ E VL + D +V K Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 136 YSF 138
S+
Sbjct: 72 GSY 74
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVAHVRAERDV--LVEADH 73
+E L +G G F V + K+T + A+K ++ E + + A R++ L E H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 74 QWVIG 78
+IG
Sbjct: 72 PNIIG 76
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase
16 In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase
16 In Complex With Staurosporine
Length = 317
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMK 45
+G G F V LV+ GH YA+K
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALK 60
>pdb|3M5W|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
Campylobacter Jejuni
pdb|3M5W|B Chain B, Crystal Structure Of Tryptophanyl-Trna Synthetase From
Campylobacter Jejuni
pdb|3TZL|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
Campylobacter Jejuni Complexed With Adp And Tryptophane
pdb|3TZL|B Chain B, Crystal Structure Of Tryptophanyl-Trna Synthetase From
Campylobacter Jejuni Complexed With Adp And Tryptophane
Length = 322
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 16 FEPLKVIGRGAFGEVRLVQKKDTGH-VYAMKILRKADML---------EKEQVAHVRAER 65
F P ++ R + ++ + H +++ +L AD+L K+Q+ HV R
Sbjct: 98 FTPXGLLERAHSYKDKVAKGLSASHGLFSYPVLXAADILLFDTRIVPVGKDQIQHVEIAR 157
Query: 66 DVLVEADHQW 75
D+ ++ +++W
Sbjct: 158 DIALKVNNEW 167
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 9/44 (20%)
Query: 96 VYAMKILRKADML---------EKEQVAHVRAERDVLVEADHQW 130
+++ +L AD+L K+Q+ HV RD+ ++ +++W
Sbjct: 124 LFSYPVLXAADILLFDTRIVPVGKDQIQHVEIARDIALKVNNEW 167
>pdb|1PSB|C Chain C, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|D Chain D, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 26
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/13 (84%), Positives = 13/13 (100%)
Query: 2 EFLRLKRSRLGVE 14
EFLRLKR+RLG+E
Sbjct: 14 EFLRLKRTRLGLE 26
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+G+GAF VR K TG +A KI+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIIN 40
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV--AHVRAERDVLVEA 71
+DFE + +G G G V V K +G V A K++ LE + + E VL E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHEC 61
Query: 72 DHQWVIG-RGVF---GEVRLV-QKKDTGHVYAMKILRKADMLEKEQVAHVR 117
+ +++G G F GE+ + + D G + ++L+KA + ++ + V
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD--QVLKKAGRIPEQILGKVS 110
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+G+GAF VR K TG +A KI+
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIIN 39
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV--AHVRAERDVLVEA 71
+DFE + +G G G V V K +G V A K++ LE + + E VL E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHEC 61
Query: 72 DHQWVIG-RGVF---GEVRLV-QKKDTGHVYAMKILRKADMLEKEQVAHVR 117
+ +++G G F GE+ + + D G + ++L+KA + ++ + V
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD--QVLKKAGRIPEQILGKVS 110
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKK 45
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV--AHVRAERDVLVEA 71
+DFE + +G G G V V K +G V A K++ LE + + E VL E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHEC 61
Query: 72 DHQWVIG-RGVF---GEVRLV-QKKDTGHVYAMKILRKADMLEKEQVAHVR 117
+ +++G G F GE+ + + D G + ++L+KA + ++ + V
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD--QVLKKAGRIPEQILGKVS 110
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain
Of Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKK 45
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+G+GAF VR K TG +A KI+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIIN 40
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV--AHVRAERDVLVEA 71
+DFE + +G G G V V K +G V A K++ LE + + E VL E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHEC 61
Query: 72 DHQWVIG-RGVF---GEVRLV-QKKDTGHVYAMKILRKADMLEKEQVAHVR 117
+ +++G G F GE+ + + D G + ++L+KA + ++ + V
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD--QVLKKAGRIPEQILGKVS 110
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1)
In Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With
N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILR 48
+G+GAF VR K TG +A KI+
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIIN 63
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV--AHVRAERDVLVEA 71
+DFE + +G G G V V K +G V A K++ LE + + E VL E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHEC 80
Query: 72 DHQWVIG-RGVF---GEVRLV-QKKDTGHVYAMKILRKADMLEKEQVAHV 116
+ +++G G F GE+ + + D G + ++L+KA + ++ + V
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD--QVLKKAGRIPEQILGKV 128
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV--AHVRAERDVLVEA 71
+DFE + +G G G V V K +G V A K++ LE + + E VL E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHEC 64
Query: 72 DHQWVIG-RGVF---GEVRLV-QKKDTGHVYAMKILRKADMLEKEQVAHV 116
+ +++G G F GE+ + + D G + ++L+KA + ++ + V
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD--QVLKKAGRIPEQILGKV 112
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV--AHVRAERDVLVEA 71
+DFE + +G G G V VQ + +G + A K++ LE + + E VL E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH----LEIKPAIRNQIIRELQVLHEC 71
Query: 72 DHQWVIG-RGVF---GEVRLV-QKKDTGHVYAMKILRKADMLEKEQVAHV 116
+ +++G G F GE+ + + D G + ++L++A + +E + V
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD--QVLKEAKRIPEEILGKV 119
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 22 IGRGAFGEVRLVQKKDTGHVYAMKILRK 49
+G G F V+ ++K TG YA K ++K
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 14 EDFEPLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQV--AHVRAERDVLVEA 71
+DFE + +G G G V V K +G V A K++ LE + + E VL E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHEC 61
Query: 72 DHQWVIG-RGVF---GEVRLV-QKKDTGHVYAMKILRKADMLEKEQVAHV 116
+ +++G G F GE+ + + D G + ++L+KA + ++ + V
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD--QVLKKAGRIPEQILGKV 109
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,961,390
Number of Sequences: 62578
Number of extensions: 146556
Number of successful extensions: 1372
Number of sequences better than 100.0: 451
Number of HSP's better than 100.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 850
length of query: 141
length of database: 14,973,337
effective HSP length: 89
effective length of query: 52
effective length of database: 9,403,895
effective search space: 489002540
effective search space used: 489002540
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 46 (22.3 bits)