BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy522
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/131 (98%), Positives = 129/131 (98%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM
Sbjct: 269 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 328
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF IHTSRMTLAEDVNL ELIMAKDD
Sbjct: 329 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDD 388
Query: 121 LSGADIKAICT 131
LSGADIKAICT
Sbjct: 389 LSGADIKAICT 399
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/131 (94%), Positives = 128/131 (97%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVAEEHAPSIVFIDEIDA+GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM
Sbjct: 270 LFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTSRMTLA+DV L +LIMAKDD
Sbjct: 330 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDD 389
Query: 121 LSGADIKAICT 131
LSGADIKAICT
Sbjct: 390 LSGADIKAICT 400
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/131 (94%), Positives = 128/131 (97%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVAEEHAPSIVFIDEIDA+GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM
Sbjct: 270 LFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTSRMTLA+DV L +LIMAKDD
Sbjct: 330 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDD 389
Query: 121 LSGADIKAICT 131
LSGADIKAICT
Sbjct: 390 LSGADIKAICT 400
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/131 (94%), Positives = 128/131 (97%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVAEEHAPSIVFIDEIDA+GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM
Sbjct: 270 LFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTSRMTLA+DV L +LIMAKDD
Sbjct: 330 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDD 389
Query: 121 LSGADIKAICT 131
LSGADIKAICT
Sbjct: 390 LSGADIKAICT 400
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/131 (94%), Positives = 127/131 (96%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVAEEH PSIVFIDEIDA+GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM
Sbjct: 270 LFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIETLDPALIRPGRIDRKIEFPLPDEKTK+RIF IHTSRMTLA+DV L ELIMAKDD
Sbjct: 330 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDD 389
Query: 121 LSGADIKAICT 131
LSGADIKAICT
Sbjct: 390 LSGADIKAICT 400
>sp|O16368|PRS4_CAEEL Probable 26S protease regulatory subunit 4 OS=Caenorhabditis
elegans GN=rpt-2 PE=3 SV=1
Length = 443
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/131 (90%), Positives = 127/131 (96%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVAEE+APSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKV+M
Sbjct: 273 LFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLM 332
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIE+LDPALIRPGRIDRKIEFPLPDEKTKRRIF IHTSRMTL ++VNL+E I AKD+
Sbjct: 333 ATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDE 392
Query: 121 LSGADIKAICT 131
LSGADIKA+CT
Sbjct: 393 LSGADIKAMCT 403
>sp|Q55BV5|PRS4_DICDI 26S protease regulatory subunit 4 homolog OS=Dictyostelium
discoideum GN=psmC1 PE=1 SV=1
Length = 439
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/131 (87%), Positives = 124/131 (94%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVA+E APSIVFIDEIDAVGTKRYDS SGGEREIQRTMLELLNQLDGFD+R DVKVIM
Sbjct: 269 LFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIM 328
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIETLDPALIRPGRIDRKIEFPLPD KTKR+IF IHT++M L+EDVNL+E +M+KDD
Sbjct: 329 ATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDD 388
Query: 121 LSGADIKAICT 131
LSGADIKAICT
Sbjct: 389 LSGADIKAICT 399
>sp|Q9SL67|PRS4B_ARATH 26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis
thaliana GN=RPT2B PE=2 SV=1
Length = 443
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 113/131 (86%), Positives = 125/131 (95%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVA++ +PSIVFIDEIDAVGTKRYD+NSGGEREIQRTMLELLNQLDGFDSRGDVKVI+
Sbjct: 273 LFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVIL 332
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIE+LDPAL+RPGRIDRKIEFPLPD KT+RRIF IHTS+MTLAEDVNL+E +M KD+
Sbjct: 333 ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDE 392
Query: 121 LSGADIKAICT 131
SGADIKAICT
Sbjct: 393 FSGADIKAICT 403
>sp|P46466|PRS4_ORYSJ 26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp.
japonica GN=TBP2 PE=2 SV=2
Length = 448
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/131 (85%), Positives = 125/131 (95%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVA+E +PSIVFIDEIDAVGTKRYD++SGGEREIQRTMLELLNQLDGFDSRGDVKVI+
Sbjct: 278 LFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL 337
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIE+LDPAL+RPGRIDRKIEFPLPD KT+RRIF IHTS+MTLA+DVNL+E +M KD+
Sbjct: 338 ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDE 397
Query: 121 LSGADIKAICT 131
SGADIKAICT
Sbjct: 398 FSGADIKAICT 408
>sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis
thaliana GN=RPT2A PE=2 SV=1
Length = 443
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 111/131 (84%), Positives = 125/131 (95%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVA++ +PSIVFIDEIDAVGTKRYD++SGGEREIQRTMLELLNQLDGFDSRGDVKVI+
Sbjct: 273 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL 332
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRIE+LDPAL+RPGRIDRKIEFPLPD KT+RRIF IHTS+MTL+EDVNL+E +M KD+
Sbjct: 333 ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDE 392
Query: 121 LSGADIKAICT 131
SGADIKAICT
Sbjct: 393 FSGADIKAICT 403
>sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT2 PE=1
SV=3
Length = 437
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 118/131 (90%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+F+VA E+APSIVFIDEIDA+GTKRYDSNSGGEREIQRTMLELLNQLDGFD RGDVKVIM
Sbjct: 267 IFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIM 326
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATN+IETLDPALIRPGRIDRKI F PD TK++I IHTS+M L+EDVNL+ L+ KDD
Sbjct: 327 ATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDD 386
Query: 121 LSGADIKAICT 131
LSGADI+A+CT
Sbjct: 387 LSGADIQAMCT 397
>sp|Q8SRH0|PRS4_ENCCU 26S protease regulatory subunit 4 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT2 PE=1 SV=1
Length = 424
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/131 (77%), Positives = 119/131 (90%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LFRVA+ HAPSI+FIDEIDA+G KRY+++SGG RE+QRTMLELLNQLDGFD+R D+KVIM
Sbjct: 254 LFRVADMHAPSIIFIDEIDAIGGKRYNTSSGGRREVQRTMLELLNQLDGFDTRNDIKVIM 313
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATN+IE LDPALIRPGRIDRKIEF +PD TK++IF+IHTSRMTL E VN++ LI +K+D
Sbjct: 314 ATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKED 373
Query: 121 LSGADIKAICT 131
LSGADIKAICT
Sbjct: 374 LSGADIKAICT 384
>sp|P36612|PRS4_SCHPO 26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mts2 PE=2 SV=1
Length = 448
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 104/132 (78%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD-SRGDVKVI 59
LF AEEH+PSIVFIDEIDA+GTKRYD+ SG EREIQRTMLELLNQLDGFD S+ D+KVI
Sbjct: 276 LFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVI 335
Query: 60 MATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKD 119
MATNRI LDPALIRPGRIDRKI F PDE TKR+IF IHTS+M L EDVNL+ELI KD
Sbjct: 336 MATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKD 395
Query: 120 DLSGADIKAICT 131
DLSGA+IKAI +
Sbjct: 396 DLSGAEIKAIVS 407
>sp|P46507|PRS6B_MANSE 26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1
Length = 415
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 110/130 (84%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E++P+I+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD +VKVIM
Sbjct: 247 VFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIM 306
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF+ T++M L+E+V+L+E + D
Sbjct: 307 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDR 366
Query: 121 LSGADIKAIC 130
+SGADI AIC
Sbjct: 367 VSGADINAIC 376
>sp|Q63570|PRS6B_RAT 26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4
PE=1 SV=1
Length = 418
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 110/130 (84%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD +VKVIM
Sbjct: 250 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 309
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D
Sbjct: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 369
Query: 121 LSGADIKAIC 130
+SGADI +IC
Sbjct: 370 ISGADINSIC 379
>sp|P54775|PRS6B_MOUSE 26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1
SV=2
Length = 418
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 110/130 (84%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD +VKVIM
Sbjct: 250 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 309
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D
Sbjct: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 369
Query: 121 LSGADIKAIC 130
+SGADI +IC
Sbjct: 370 ISGADINSIC 379
>sp|Q4R7L3|PRS6B_MACFA 26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4
PE=2 SV=1
Length = 418
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 110/130 (84%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD +VKVIM
Sbjct: 250 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 309
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D
Sbjct: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 369
Query: 121 LSGADIKAIC 130
+SGADI +IC
Sbjct: 370 ISGADINSIC 379
>sp|P43686|PRS6B_HUMAN 26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1
SV=2
Length = 418
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 110/130 (84%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD +VKVIM
Sbjct: 250 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 309
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D
Sbjct: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 369
Query: 121 LSGADIKAIC 130
+SGADI +IC
Sbjct: 370 ISGADINSIC 379
>sp|Q3T030|PRS6B_BOVIN 26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1
Length = 418
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 110/130 (84%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD +VKVIM
Sbjct: 250 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 309
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D
Sbjct: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDK 369
Query: 121 LSGADIKAIC 130
+SGADI +IC
Sbjct: 370 ISGADINSIC 379
>sp|P46502|PRS6B_CAEEL Probable 26S protease regulatory subunit 6B OS=Caenorhabditis
elegans GN=rpt-3 PE=3 SV=1
Length = 414
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 109/130 (83%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E++PSI+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD +VKVIM
Sbjct: 246 VFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIM 305
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F+ SRM L++DV+L++ + D
Sbjct: 306 ATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDK 365
Query: 121 LSGADIKAIC 130
+SGADI +IC
Sbjct: 366 ISGADINSIC 375
>sp|P34123|PRS6B_DICDI 26S protease regulatory subunit 6B homolog OS=Dictyostelium
discoideum GN=psmC4 PE=1 SV=1
Length = 403
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 110/130 (84%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A E++P+I+FIDEIDA+ TKR+D+ +G +RE+QR ++ELLNQ+DGFD +VKVIM
Sbjct: 235 VFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIM 294
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF + TS+M L+++V+L++ + D
Sbjct: 295 ATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDK 354
Query: 121 LSGADIKAIC 130
LSGA+I++IC
Sbjct: 355 LSGAEIQSIC 364
>sp|O88685|PRS6A_MOUSE 26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=1
SV=2
Length = 442
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 101/129 (78%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E APSI+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF VKVI A
Sbjct: 275 FALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAA 334
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR++ LDPAL+R GR+DRKIEFP+P+E+ + RI IH+ +M ++ DVN +EL DD
Sbjct: 335 TNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDF 394
Query: 122 SGADIKAIC 130
+GA KA+C
Sbjct: 395 NGAQCKAVC 403
>sp|Q63569|PRS6A_RAT 26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3
PE=2 SV=1
Length = 439
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 101/129 (78%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E APSI+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF VKVI A
Sbjct: 272 FALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAA 331
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR++ LDPAL+R GR+DRKIEFP+P+E+ + RI IH+ +M ++ DVN +EL DD
Sbjct: 332 TNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDF 391
Query: 122 SGADIKAIC 130
+GA KA+C
Sbjct: 392 NGAQCKAVC 400
>sp|P17980|PRS6A_HUMAN 26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1
SV=3
Length = 439
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 101/129 (78%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E APSI+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF VKVI A
Sbjct: 272 FALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAA 331
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR++ LDPAL+R GR+DRKIEFP+P+E+ + RI IH+ +M ++ DVN +EL DD
Sbjct: 332 TNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDF 391
Query: 122 SGADIKAIC 130
+GA KA+C
Sbjct: 392 NGAQCKAVC 400
>sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana
GN=RPT3 PE=1 SV=1
Length = 408
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 108/130 (83%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E+AP+I+FIDE+DA+ T R+D+ +G +RE+QR ++ELLNQ+DGFD +VKVIM
Sbjct: 240 VFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM 299
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F + TS+M L+++V+L++ + D
Sbjct: 300 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDK 359
Query: 121 LSGADIKAIC 130
+S A+I AIC
Sbjct: 360 ISAAEIAAIC 369
>sp|O42586|PR6AB_XENLA 26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-b
PE=2 SV=1
Length = 404
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 100/129 (77%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E APSI+FIDE+DA+G KR+DS G+RE+QRTMLELLNQLDGF VKVI A
Sbjct: 237 FSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAA 296
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR++ LDPAL+R GR+DRKIEFP+P+E+ + RI IH+ +M ++ DVN +EL DD
Sbjct: 297 TNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDF 356
Query: 122 SGADIKAIC 130
+GA KA+C
Sbjct: 357 NGAQCKAVC 365
>sp|P85200|PRS6B_HELAN 26S protease regulatory subunit 6B homolog OS=Helianthus annuus
PE=1 SV=1
Length = 414
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 108/130 (83%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E+AP+I+FIDE+DA+ T R+D+ +G +RE+QR ++ELLNQ+DGFD +VKVIM
Sbjct: 246 VFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM 305
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F + T++M L+++V+L++ + D
Sbjct: 306 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDK 365
Query: 121 LSGADIKAIC 130
+S A+I AIC
Sbjct: 366 ISAAEITAIC 375
>sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 413
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 107/130 (82%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A+E+AP+I+FIDE+DA+ T R+D+ +G +RE+QR ++ELLNQ+DGFD +VKVIM
Sbjct: 245 VFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM 304
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F + T++M L ++V+L++ + D
Sbjct: 305 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDK 364
Query: 121 LSGADIKAIC 130
+S A+I AIC
Sbjct: 365 ISAAEITAIC 374
>sp|Q54PN7|PRS6A_DICDI 26S protease regulatory subunit 6A homolog OS=Dictyostelium
discoideum GN=psmC3 PE=1 SV=1
Length = 421
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 102/129 (79%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E P+I+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF S ++KVI A
Sbjct: 254 FALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAA 313
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNRI+ LDPAL+R GR+DRKIEFPLP+E+ + I IH+ +M ++ DVN EL + +D
Sbjct: 314 TNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDF 373
Query: 122 SGADIKAIC 130
+GA +KA+C
Sbjct: 374 NGAQLKAVC 382
>sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU08_1970 PE=1 SV=1
Length = 387
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 106/130 (81%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+FR+A E APSIVFIDE+D++ TKR+D+++ +RE+QR ++ELLNQ+DGFD +VKVIM
Sbjct: 219 VFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIM 278
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR +T+DPAL+RPGR+DRKIEFPLPD + KR +FN TS+M+L + V+++ L+ +
Sbjct: 279 ATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEK 338
Query: 121 LSGADIKAIC 130
+S ADI +IC
Sbjct: 339 ISCADINSIC 348
>sp|P33297|PRS6A_YEAST 26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPT5 PE=1 SV=3
Length = 434
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 102/129 (79%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E AP+I+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF S VKV+ A
Sbjct: 267 FALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAA 326
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR++ LDPAL+R GR+DRKIEFPLP E ++ +I IH+ +MT +D+N QEL + D+
Sbjct: 327 TNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEF 386
Query: 122 SGADIKAIC 130
+GA +KA+
Sbjct: 387 NGAQLKAVT 395
>sp|O23894|PRS6A_BRACM 26S protease regulatory subunit 6A homolog OS=Brassica campestris
GN=TBP1 PE=2 SV=1
Length = 424
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 100/129 (77%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F++A+E AP I+FIDEIDA+GTKR+DS G+RE+QRTMLELLNQLDGF S +KVI A
Sbjct: 257 FQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAA 316
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR + LDPAL+R GR+DRKIEFP P E+ + RI IH+ +M + DVN +EL + DD
Sbjct: 317 TNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDF 376
Query: 122 SGADIKAIC 130
+GA +KA+C
Sbjct: 377 NGAQLKAVC 385
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 104/131 (79%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+F++A+E APSI+FIDEIDA+ KR D+ +GG+RE+QRT+++LL ++DGFD+RGDVK+I
Sbjct: 255 IFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIG 314
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR + LDPA++RPGR DR IE P PDEK + I IHT +M LAEDVNL+E+ +
Sbjct: 315 ATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEG 374
Query: 121 LSGADIKAICT 131
GA++KAICT
Sbjct: 375 CVGAELKAICT 385
>sp|Q9SEI2|PS6AA_ARATH 26S protease regulatory subunit 6A homolog A OS=Arabidopsis
thaliana GN=RPT5A PE=2 SV=1
Length = 424
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 100/129 (77%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F++A+E AP I+FIDEIDA+GTKR+DS G+RE+QRTMLELLNQLDGF S +KVI A
Sbjct: 257 FQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAA 316
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR + LDPAL+R GR+DRKIEFP P E+ + RI IH+ +M + DVN +EL + DD
Sbjct: 317 TNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDF 376
Query: 122 SGADIKAIC 130
+GA +KA+C
Sbjct: 377 NGAQLKAVC 385
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++ ++KVIM
Sbjct: 230 LFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 289
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LDPAL+RPGRIDRKIEFP P+E+ + I IH+ +M L +NL+++
Sbjct: 290 ATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 349
Query: 121 LSGADIKAICT 131
SGA++K +CT
Sbjct: 350 ASGAEVKGVCT 360
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 105/131 (80%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+F++A+E APSI+FIDE+DA+ +R +S++ G+RE+QRTM++LL +LDGFD RGDVKVI
Sbjct: 226 VFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIG 285
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LDPA++RPGR DR IE PLP + + +IF IHT +M LAEDV+ +EL +
Sbjct: 286 ATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEG 345
Query: 121 LSGADIKAICT 131
SGADIKAICT
Sbjct: 346 ASGADIKAICT 356
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++ ++KVIM
Sbjct: 233 LFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 292
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LDPAL+RPGRIDRKIEFP P+E+ + I IH+ +M L +NL+++
Sbjct: 293 ATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 352
Query: 121 LSGADIKAICT 131
SGA++K +CT
Sbjct: 353 ASGAEVKGVCT 363
>sp|P46465|PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp.
japonica GN=TBP1 PE=2 SV=2
Length = 429
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 100/129 (77%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F++A+E +P I+FIDEIDA+GTKR+DS G+RE+QRTMLELLNQLDGF S +KVI A
Sbjct: 262 FQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAA 321
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR + LDPAL+R GR+DRKIEFP P E+ + RI IH+ +M + DVN +EL + DD
Sbjct: 322 TNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDF 381
Query: 122 SGADIKAIC 130
+GA +KA+C
Sbjct: 382 NGAQLKAVC 390
>sp|P54776|PRS6A_SOLLC 26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum
GN=TBP1 PE=2 SV=1
Length = 423
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 100/130 (76%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F++A+E +P I+FIDEIDA+GTKR+DS G+RE+QRTMLELLNQLDGF S +KVI A
Sbjct: 256 FQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAA 315
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR + LDPAL+R GR+DRKIEFP P E+ + RI IH+ +M + DVN +EL + DD
Sbjct: 316 TNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDF 375
Query: 122 SGADIKAICT 131
+GA +KA+C
Sbjct: 376 NGAQLKAVCV 385
>sp|O14126|PRS6A_SCHPO 26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tbp1 PE=3 SV=1
Length = 438
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 104/130 (80%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E +P+I+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF S VKVI A
Sbjct: 271 FALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAA 330
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR++TLDPAL+R GR+DRK+EFPLP+E+ + I IH+ +M + +D+N +EL + D+
Sbjct: 331 TNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEY 390
Query: 122 SGADIKAICT 131
+GA +K++C
Sbjct: 391 NGAMLKSVCV 400
>sp|O04019|PS6AB_ARATH 26S protease regulatory subunit 6A homolog B OS=Arabidopsis
thaliana GN=RPT5B PE=1 SV=3
Length = 423
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 99/129 (76%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E +P I+FIDEIDA+GTKR+DS G+RE+QRTMLELLNQLDGF S +KVI A
Sbjct: 256 FLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAA 315
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR + LDPAL+R GR+DRKIEFP P E+ + RI IH+ +M + DVN +EL + DD
Sbjct: 316 TNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDF 375
Query: 122 SGADIKAIC 130
+GA +KA+C
Sbjct: 376 NGAQLKAVC 384
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 101/131 (77%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R DSN G + E+QRTMLELLNQLDGF+S ++KVIM
Sbjct: 281 LFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIM 340
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LDPAL+R GRIDRKIEFP P+E + I IH+ +M L + ++L+ +
Sbjct: 341 ATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVG 400
Query: 121 LSGADIKAICT 131
SGA++KA+CT
Sbjct: 401 CSGAEVKAVCT 411
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 100/131 (76%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R + + GG+ E+QRTMLELLNQLDGF++ ++K+IM
Sbjct: 233 LFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIM 292
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR++ LDPAL+RPGRIDRKIEFP P + I IH+ +M L +NL+++ +
Sbjct: 293 ATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNG 352
Query: 121 LSGADIKAICT 131
SGAD+K +CT
Sbjct: 353 CSGADVKGVCT 363
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 101/131 (77%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVIM
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LD AL+RPGRIDRKIEFP P+E+ + I IH+ +M L +NL+++
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 121 LSGADIKAICT 131
SGA++K +CT
Sbjct: 354 ASGAEVKGVCT 364
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 101/131 (77%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVIM
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LD AL+RPGRIDRKIEFP P+E+ + I IH+ +M L +NL+++
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 121 LSGADIKAICT 131
SGA++K +CT
Sbjct: 354 ASGAEVKGVCT 364
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 101/131 (77%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVIM
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LD AL+RPGRIDRKIEFP P+E+ + I IH+ +M L +NL+++
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 121 LSGADIKAICT 131
SGA++K +CT
Sbjct: 354 ASGAEVKGVCT 364
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 101/131 (77%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVIM
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LD AL+RPGRIDRKIEFP P+E+ + I IH+ +M L +NL+++
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 121 LSGADIKAICT 131
SGA++K +CT
Sbjct: 354 ASGAEVKGVCT 364
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 101/131 (77%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
LF +A EHAPSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVIM
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNRI+ LD AL+RPGRIDRKIEFP P+E+ + I IH+ +M L +NL+++
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 121 LSGADIKAICT 131
SGA++K +CT
Sbjct: 354 ASGAEVKGVCT 364
>sp|Q8SR13|PRS6A_ENCCU 26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPT5 PE=1 SV=1
Length = 401
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 99/129 (76%)
Query: 2 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 61
F +A+E P+I+FIDEIDA+G KR DS+ G+RE+QRTMLELLNQLDGF S +VK+I A
Sbjct: 234 FALAKERKPTIIFIDEIDAIGAKRSDSDQTGDREVQRTMLELLNQLDGFSSSEEVKIIAA 293
Query: 62 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDL 121
TNR++ LDPAL+R GR+DRKIEFPLP+ ++RI IH +M++ +DVN EL + +
Sbjct: 294 TNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGF 353
Query: 122 SGADIKAIC 130
+GA KA+C
Sbjct: 354 NGAQCKAVC 362
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%)
Query: 1 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 60
+F +A+E +PSI+FIDEIDAV KR S++ G+RE+QRT+++LL +LDGF+SRG+V ++
Sbjct: 236 VFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVA 295
Query: 61 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD 120
ATNR + LDPAL+RPGR DR IE PLP+E +R I IHTS M LAE+V+++ L D
Sbjct: 296 ATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDG 355
Query: 121 LSGADIKAICT 131
SGAD+KAICT
Sbjct: 356 ASGADLKAICT 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,767,642
Number of Sequences: 539616
Number of extensions: 1674218
Number of successful extensions: 5615
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 4596
Number of HSP's gapped (non-prelim): 897
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)