Query psy5220
Match_columns 286
No_of_seqs 229 out of 1853
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 20:27:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5220.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5220hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f9i_B Acetyl-coenzyme A carbo 100.0 9.1E-75 3.1E-79 528.6 27.1 276 2-283 4-282 (285)
2 2f9y_B Acetyl-coenzyme A carbo 100.0 2.5E-72 8.6E-77 517.2 24.1 281 1-285 1-281 (304)
3 2bzr_A Propionyl-COA carboxyla 100.0 2.3E-49 7.9E-54 388.6 21.5 220 50-283 48-271 (548)
4 1on3_A Methylmalonyl-COA carbo 100.0 1.7E-49 5.9E-54 388.2 20.4 220 50-283 35-257 (523)
5 1x0u_A Hypothetical methylmalo 100.0 3E-49 1E-53 386.6 21.8 220 50-283 31-255 (522)
6 3iav_A Propionyl-COA carboxyla 100.0 1.2E-47 4.1E-52 374.5 21.8 221 49-283 36-260 (530)
7 3n6r_B Propionyl-COA carboxyla 100.0 1.7E-47 5.8E-52 373.2 20.4 221 49-283 44-268 (531)
8 1vrg_A Propionyl-COA carboxyla 100.0 1.4E-47 4.7E-52 375.1 18.6 220 50-283 38-261 (527)
9 1pix_A Glutaconyl-COA decarbox 100.0 7.1E-45 2.4E-49 359.0 17.4 216 48-283 50-288 (587)
10 3gf3_A Glutaconyl-COA decarbox 100.0 3.3E-44 1.1E-48 353.3 18.8 214 50-283 53-291 (588)
11 3u9r_B MCC beta, methylcrotony 100.0 5.6E-44 1.9E-48 349.7 15.9 218 50-284 65-289 (555)
12 1x0u_A Hypothetical methylmalo 100.0 8.4E-41 2.9E-45 327.0 19.3 208 45-283 276-507 (522)
13 2f9y_A Acetyl-COA carboxylase, 100.0 8.3E-38 2.8E-42 291.0 19.4 229 27-283 63-319 (339)
14 2f9i_A Acetyl-coenzyme A carbo 100.0 1.8E-37 6.3E-42 287.7 20.8 229 27-283 49-305 (327)
15 3iav_A Propionyl-COA carboxyla 100.0 9.2E-36 3.1E-40 290.8 24.6 212 45-284 283-516 (530)
16 3n6r_B Propionyl-COA carboxyla 100.0 2.2E-35 7.4E-40 288.0 24.2 209 45-284 289-517 (531)
17 1vrg_A Propionyl-COA carboxyla 100.0 2.2E-35 7.6E-40 288.8 22.3 208 45-283 281-512 (527)
18 1on3_A Methylmalonyl-COA carbo 100.0 1.1E-34 3.8E-39 283.6 22.1 210 46-283 278-508 (523)
19 2bzr_A Propionyl-COA carboxyla 100.0 2.4E-34 8.1E-39 282.3 24.3 209 46-283 300-533 (548)
20 3u9r_B MCC beta, methylcrotony 100.0 6.5E-34 2.2E-38 278.6 18.2 203 45-285 308-544 (555)
21 3gf3_A Glutaconyl-COA decarbox 100.0 6.8E-33 2.3E-37 272.9 20.1 210 45-285 311-565 (588)
22 1pix_A Glutaconyl-COA decarbox 100.0 6.5E-33 2.2E-37 273.7 19.7 209 46-285 309-563 (587)
23 2x24_A Acetyl-COA carboxylase; 100.0 1.5E-33 5.1E-38 283.8 6.6 196 62-283 78-350 (793)
24 3k8x_A Acetyl-COA carboxylase; 100.0 6.7E-30 2.3E-34 255.3 17.2 175 107-283 84-337 (758)
25 2x24_A Acetyl-COA carboxylase; 100.0 2.5E-28 8.7E-33 245.9 22.2 203 46-281 368-668 (793)
26 3k8x_A Acetyl-COA carboxylase; 99.9 1.8E-25 6E-30 223.6 22.1 161 47-239 356-557 (758)
27 3hrx_A Probable enoyl-COA hydr 99.6 1.2E-14 4E-19 130.1 16.6 160 124-284 10-196 (254)
28 3r6h_A Enoyl-COA hydratase, EC 99.6 3.1E-14 1.1E-18 125.8 16.9 160 124-285 15-201 (233)
29 3isa_A Putative enoyl-COA hydr 99.6 3.4E-14 1.2E-18 127.1 17.3 160 124-284 17-200 (254)
30 4fzw_C 1,2-epoxyphenylacetyl-C 99.6 5.2E-14 1.8E-18 127.4 16.4 166 118-285 20-217 (274)
31 4fzw_A 2,3-dehydroadipyl-COA h 99.6 2.8E-14 9.4E-19 128.1 14.3 164 119-284 11-200 (258)
32 3gow_A PAAG, probable enoyl-CO 99.6 6.7E-14 2.3E-18 125.2 16.6 160 124-284 10-196 (254)
33 3hin_A Putative 3-hydroxybutyr 99.6 2.8E-14 9.5E-19 129.3 13.8 159 124-284 26-211 (275)
34 3pea_A Enoyl-COA hydratase/iso 99.6 9.3E-14 3.2E-18 124.8 17.0 163 119-284 12-203 (261)
35 3kqf_A Enoyl-COA hydratase/iso 99.6 8.7E-14 3E-18 125.2 16.9 161 123-284 18-207 (265)
36 3i47_A Enoyl COA hydratase/iso 99.6 8.2E-14 2.8E-18 125.7 16.4 161 124-285 14-204 (268)
37 3qmj_A Enoyl-COA hydratase, EC 99.6 7.8E-14 2.7E-18 124.9 16.1 160 124-284 16-204 (256)
38 2fbm_A Y chromosome chromodoma 99.5 1.5E-13 5E-18 125.5 17.3 164 119-284 29-224 (291)
39 3p5m_A Enoyl-COA hydratase/iso 99.5 6.2E-14 2.1E-18 125.5 14.6 159 124-284 16-197 (255)
40 4di1_A Enoyl-COA hydratase ECH 99.5 8E-14 2.7E-18 126.4 15.3 162 120-284 31-220 (277)
41 3h81_A Enoyl-COA hydratase ECH 99.5 5.6E-14 1.9E-18 127.4 14.1 164 119-284 31-220 (278)
42 3ot6_A Enoyl-COA hydratase/iso 99.5 1.7E-13 5.7E-18 121.1 16.8 159 124-285 16-201 (232)
43 3lke_A Enoyl-COA hydratase; ny 99.5 1.2E-13 4.1E-18 124.2 15.7 160 124-284 14-207 (263)
44 2f6q_A Peroxisomal 3,2-trans-e 99.5 3.5E-13 1.2E-17 122.2 18.9 163 119-284 32-226 (280)
45 3l3s_A Enoyl-COA hydratase/iso 99.5 8.6E-14 2.9E-18 125.1 14.5 163 119-284 13-208 (263)
46 2ej5_A Enoyl-COA hydratase sub 99.5 1.4E-13 4.8E-18 123.2 15.8 160 124-284 13-199 (257)
47 3moy_A Probable enoyl-COA hydr 99.5 8.1E-14 2.8E-18 125.3 14.1 165 119-284 15-205 (263)
48 3qk8_A Enoyl-COA hydratase ECH 99.5 7.7E-14 2.6E-18 126.1 14.0 164 119-284 19-212 (272)
49 2a7k_A CARB; crotonase, antibi 99.5 2.3E-13 7.7E-18 121.4 16.7 160 124-284 10-198 (250)
50 3myb_A Enoyl-COA hydratase; ss 99.5 1.7E-13 5.8E-18 124.7 16.1 161 123-284 35-223 (286)
51 2gtr_A CDY-like, chromodomain 99.5 1.9E-13 6.6E-18 122.6 16.2 164 119-284 11-206 (261)
52 3njd_A Enoyl-COA hydratase; ss 99.5 1.8E-13 6.1E-18 127.1 15.9 164 120-285 42-260 (333)
53 1nzy_A Dehalogenase, 4-chlorob 99.5 2.3E-13 7.8E-18 122.7 16.2 160 124-284 13-205 (269)
54 3g64_A Putative enoyl-COA hydr 99.5 2.3E-13 8E-18 123.3 16.1 160 124-284 27-219 (279)
55 2ppy_A Enoyl-COA hydratase; be 99.5 2.7E-13 9.2E-18 121.9 16.4 163 119-284 15-207 (265)
56 1dci_A Dienoyl-COA isomerase; 99.5 3.3E-13 1.1E-17 122.0 16.6 161 123-284 13-214 (275)
57 2pbp_A Enoyl-COA hydratase sub 99.5 2.5E-13 8.6E-18 121.7 15.2 159 124-284 15-200 (258)
58 3t8b_A 1,4-dihydroxy-2-naphtho 99.5 1.2E-13 4.3E-18 128.2 13.4 161 123-284 66-273 (334)
59 1uiy_A Enoyl-COA hydratase; ly 99.5 3.4E-13 1.2E-17 120.4 15.7 160 124-284 9-198 (253)
60 3fdu_A Putative enoyl-COA hydr 99.5 4.4E-13 1.5E-17 120.7 16.3 158 124-284 15-202 (266)
61 2vx2_A Enoyl-COA hydratase dom 99.5 2.9E-13 1E-17 123.2 15.0 164 119-284 39-230 (287)
62 3sll_A Probable enoyl-COA hydr 99.5 3.7E-13 1.3E-17 122.7 15.6 160 124-284 34-229 (290)
63 3t89_A 1,4-dihydroxy-2-naphtho 99.5 1.8E-13 6.1E-18 124.8 13.3 161 123-284 37-228 (289)
64 3qre_A Enoyl-COA hydratase, EC 99.5 1.3E-13 4.4E-18 126.3 12.4 165 118-283 34-234 (298)
65 3t3w_A Enoyl-COA hydratase; ss 99.5 5E-13 1.7E-17 121.1 16.0 162 123-285 29-221 (279)
66 4eml_A Naphthoate synthase; 1, 99.5 1.4E-13 4.9E-18 124.5 12.0 161 124-285 20-215 (275)
67 3pe8_A Enoyl-COA hydratase; em 99.5 1E-13 3.5E-18 124.3 10.9 156 124-284 19-197 (256)
68 3rrv_A Enoyl-COA hydratase/iso 99.5 5E-13 1.7E-17 121.0 15.5 162 119-284 34-225 (276)
69 1wz8_A Enoyl-COA hydratase; ly 99.5 4.4E-13 1.5E-17 120.5 14.8 162 120-284 18-209 (264)
70 2j5i_A P-hydroxycinnamoyl COA 99.5 3.3E-13 1.1E-17 122.1 14.0 164 119-284 15-211 (276)
71 1ef8_A Methylmalonyl COA decar 99.5 1.3E-13 4.4E-18 123.8 11.1 160 124-284 14-201 (261)
72 3he2_A Enoyl-COA hydratase ECH 99.5 2.1E-13 7.1E-18 122.8 12.4 157 119-277 27-205 (264)
73 3gkb_A Putative enoyl-COA hydr 99.5 2.7E-13 9.2E-18 123.5 13.1 163 119-284 15-212 (287)
74 3rsi_A Putative enoyl-COA hydr 99.5 3.3E-13 1.1E-17 121.4 13.5 160 124-284 19-207 (265)
75 4hdt_A 3-hydroxyisobutyryl-COA 99.5 8.3E-13 2.8E-17 123.6 16.8 168 108-280 7-205 (353)
76 3h0u_A Putative enoyl-COA hydr 99.5 3.5E-13 1.2E-17 122.8 13.8 163 119-284 14-209 (289)
77 1mj3_A Enoyl-COA hydratase, mi 99.5 1.9E-13 6.4E-18 122.7 11.8 161 123-284 16-202 (260)
78 3lao_A Enoyl-COA hydratase/iso 99.5 1.1E-13 3.7E-18 124.1 9.5 164 119-284 18-210 (258)
79 1sg4_A 3,2-trans-enoyl-COA iso 99.5 8.5E-13 2.9E-17 118.4 15.3 159 124-284 15-204 (260)
80 3hp0_A Putative polyketide bio 99.5 3.8E-13 1.3E-17 121.2 12.7 157 124-283 17-201 (267)
81 3swx_A Probable enoyl-COA hydr 99.5 1.6E-13 5.6E-18 123.4 10.2 164 119-284 15-207 (265)
82 2q35_A CURF; crotonase, lyase; 99.5 1.3E-13 4.6E-18 122.5 9.5 159 124-284 13-195 (243)
83 4f47_A Enoyl-COA hydratase ECH 99.5 1.9E-13 6.4E-18 123.8 10.4 160 124-284 30-220 (278)
84 3oc7_A Enoyl-COA hydratase; se 99.4 1.8E-12 6.1E-17 116.7 15.2 158 123-284 20-210 (267)
85 3r9q_A Enoyl-COA hydratase/iso 99.4 1.1E-13 3.7E-18 124.5 6.9 160 124-284 21-206 (262)
86 2uzf_A Naphthoate synthase; ly 99.4 1.1E-12 3.9E-17 118.4 13.6 160 124-284 23-212 (273)
87 1pjh_A Enoyl-COA isomerase; EC 99.4 2.8E-12 9.5E-17 116.2 16.0 164 119-284 15-224 (280)
88 3m6n_A RPFF protein; enoyl-COA 99.4 1.3E-12 4.4E-17 120.0 13.9 146 137-283 59-244 (305)
89 2j5g_A ALR4455 protein; enzyme 99.4 2.9E-12 9.9E-17 115.3 15.9 164 119-284 29-222 (263)
90 3qxz_A Enoyl-COA hydratase/iso 99.4 1.3E-13 4.6E-18 124.0 7.1 162 119-283 13-202 (265)
91 3tlf_A Enoyl-COA hydratase/iso 99.4 2.2E-13 7.5E-18 123.1 8.2 164 119-284 17-216 (274)
92 1hzd_A AUH, AU-binding protein 99.4 1.9E-12 6.3E-17 117.0 13.9 158 124-282 22-212 (272)
93 1szo_A 6-oxocamphor hydrolase; 99.4 4.3E-12 1.5E-16 113.7 15.8 163 119-284 22-213 (257)
94 3trr_A Probable enoyl-COA hydr 99.4 2.6E-13 8.7E-18 121.6 7.7 157 124-284 17-198 (256)
95 3qxi_A Enoyl-COA hydratase ECH 99.4 2.4E-13 8.3E-18 122.4 6.9 162 119-284 21-207 (265)
96 3r9t_A ECHA1_1; ssgcid, seattl 99.4 5.1E-13 1.7E-17 120.4 8.2 159 124-284 19-206 (267)
97 3bpt_A 3-hydroxyisobutyryl-COA 99.3 2.2E-11 7.6E-16 114.3 16.3 153 119-273 12-195 (363)
98 2w3p_A Benzoyl-COA-dihydrodiol 99.3 8.7E-12 3E-16 121.4 13.8 164 119-284 27-239 (556)
99 3ju1_A Enoyl-COA hydratase/iso 99.3 2.3E-11 7.9E-16 115.8 15.5 149 123-272 51-234 (407)
100 3zwc_A Peroxisomal bifunctiona 99.3 1.9E-11 6.6E-16 124.2 13.4 162 116-284 24-210 (742)
101 3viv_A 441AA long hypothetical 99.3 6.2E-11 2.1E-15 104.5 15.0 138 121-274 7-182 (230)
102 2np9_A DPGC; protein inhibitor 99.3 1.3E-11 4.4E-16 118.3 11.1 161 120-282 174-386 (440)
103 1wdk_A Fatty oxidation complex 99.3 9.1E-11 3.1E-15 119.0 17.5 159 124-284 17-208 (715)
104 2wtb_A MFP2, fatty acid multif 99.1 9.5E-11 3.2E-15 119.1 10.4 158 124-283 18-206 (725)
105 3rst_A Signal peptide peptidas 99.0 2.5E-09 8.6E-14 94.7 12.1 130 142-279 30-225 (240)
106 3bf0_A Protease 4; bacterial, 99.0 1.6E-09 5.5E-14 107.7 11.6 148 123-278 302-515 (593)
107 1y7o_A ATP-dependent CLP prote 98.8 1.6E-08 5.6E-13 88.3 10.9 124 135-269 51-214 (218)
108 2cby_A ATP-dependent CLP prote 98.7 9.4E-08 3.2E-12 82.8 10.3 129 134-273 32-199 (208)
109 2f6i_A ATP-dependent CLP prote 98.4 5.4E-07 1.9E-11 78.5 8.9 124 134-268 44-204 (215)
110 3p2l_A ATP-dependent CLP prote 98.4 6.1E-07 2.1E-11 77.4 8.8 126 134-270 35-199 (201)
111 3qwd_A ATP-dependent CLP prote 98.4 1.4E-06 4.8E-11 75.2 10.6 124 134-268 32-193 (203)
112 1yg6_A ATP-dependent CLP prote 98.4 1.1E-06 3.8E-11 75.1 9.7 124 134-268 31-192 (193)
113 1tg6_A Putative ATP-dependent 98.4 1.6E-06 5.4E-11 78.2 10.3 129 134-273 87-254 (277)
114 4gm2_A ATP-dependent CLP prote 98.1 1.4E-05 4.6E-10 69.0 10.3 125 133-268 32-205 (205)
115 3bf0_A Protease 4; bacterial, 97.7 0.00021 7E-09 70.9 10.8 87 140-235 69-158 (593)
116 3qt1_I DNA-directed RNA polyme 87.5 0.24 8.2E-06 39.4 2.0 31 28-58 24-57 (133)
117 3v2d_5 50S ribosomal protein L 85.3 0.24 8.1E-06 33.9 0.8 24 27-56 29-52 (60)
118 2akl_A PHNA-like protein PA012 84.8 0.21 7.3E-06 39.4 0.4 28 29-58 28-55 (138)
119 3h0g_I DNA-directed RNA polyme 80.6 0.44 1.5E-05 36.7 0.7 32 29-60 5-39 (113)
120 3j20_Y 30S ribosomal protein S 78.0 0.48 1.6E-05 31.1 0.2 29 27-56 18-46 (50)
121 4ayb_P DNA-directed RNA polyme 76.6 1 3.5E-05 29.1 1.4 28 30-57 5-33 (48)
122 1twf_I B12.6, DNA-directed RNA 76.6 0.49 1.7E-05 36.9 -0.1 32 29-60 5-39 (122)
123 2zjr_Z 50S ribosomal protein L 76.4 0.86 2.9E-05 31.1 1.1 26 25-56 27-52 (60)
124 3pwf_A Rubrerythrin; non heme 73.8 0.84 2.9E-05 37.7 0.6 27 26-57 137-163 (170)
125 3a43_A HYPD, hydrogenase nicke 73.5 1.5 5.1E-05 34.9 2.0 30 28-57 70-117 (139)
126 1gh9_A 8.3 kDa protein (gene M 70.4 0.61 2.1E-05 33.0 -0.9 28 29-59 5-32 (71)
127 1pft_A TFIIB, PFTFIIBN; N-term 70.0 1.1 3.8E-05 28.9 0.4 28 29-57 6-34 (50)
128 2kdx_A HYPA, hydrogenase/ureas 69.6 1.7 5.8E-05 33.5 1.5 28 27-57 72-100 (119)
129 1dl6_A Transcription factor II 68.4 1.5 5E-05 29.6 0.7 38 29-73 12-49 (58)
130 1wd2_A Ariadne-1 protein homol 67.8 2 6.7E-05 29.2 1.3 30 28-58 6-37 (60)
131 1vq8_Z 50S ribosomal protein L 66.8 1.4 4.8E-05 32.1 0.4 29 27-56 26-54 (83)
132 2k4x_A 30S ribosomal protein S 66.3 1.5 5.3E-05 29.2 0.5 29 27-56 17-45 (55)
133 1qyp_A RNA polymerase II; tran 63.8 1.8 6.2E-05 28.8 0.5 30 28-57 15-53 (57)
134 1twf_L ABC10-alpha, DNA-direct 60.1 3.4 0.00012 29.0 1.4 30 26-57 26-55 (70)
135 1lko_A Rubrerythrin all-iron(I 58.7 2.5 8.6E-05 35.3 0.6 27 27-57 155-181 (191)
136 2k5c_A Uncharacterized protein 57.8 2.8 9.5E-05 30.3 0.6 31 27-70 50-80 (95)
137 3cwc_A Putative glycerate kina 56.9 11 0.00037 35.1 4.6 43 109-168 288-330 (383)
138 3irb_A Uncharacterized protein 56.2 3 0.0001 33.3 0.6 24 28-56 47-70 (145)
139 3h0g_I DNA-directed RNA polyme 56.0 4.7 0.00016 30.8 1.7 38 20-58 65-111 (113)
140 3m7n_A Putative uncharacterize 55.9 3 0.0001 34.5 0.6 27 27-56 139-165 (179)
141 1tfi_A Transcriptional elongat 55.3 2.4 8.1E-05 27.7 -0.1 31 29-59 10-49 (50)
142 3w0f_A Endonuclease 8-like 3; 53.8 3.5 0.00012 36.9 0.7 28 30-57 253-283 (287)
143 2v3b_B Rubredoxin 2, rubredoxi 53.6 4.7 0.00016 26.8 1.2 10 47-56 36-45 (55)
144 2lcq_A Putative toxin VAPC6; P 53.4 4.2 0.00015 32.8 1.1 25 29-56 133-157 (165)
145 2apo_B Ribosome biogenesis pro 53.0 5.4 0.00018 27.1 1.4 23 27-56 5-27 (60)
146 2hf1_A Tetraacyldisaccharide-1 52.5 2 6.9E-05 30.0 -0.9 34 29-65 9-42 (68)
147 2jr6_A UPF0434 protein NMA0874 52.1 2.1 7.1E-05 29.9 -0.8 35 29-66 9-43 (68)
148 2js4_A UPF0434 protein BB2007; 51.9 2.1 7E-05 30.1 -0.9 38 29-69 9-46 (70)
149 2pk7_A Uncharacterized protein 51.5 2.1 7.1E-05 30.0 -0.9 35 29-66 9-43 (69)
150 1e8j_A Rubredoxin; iron-sulfur 50.0 7 0.00024 25.6 1.5 10 47-56 36-45 (52)
151 1dx8_A Rubredoxin; electron tr 49.4 5.8 0.0002 27.7 1.1 28 27-56 7-49 (70)
152 3h0g_L DNA-directed RNA polyme 49.1 6.4 0.00022 27.0 1.3 35 23-59 16-50 (63)
153 2kgg_A Histone demethylase jar 48.6 6.4 0.00022 25.5 1.2 30 24-53 14-51 (52)
154 2kn9_A Rubredoxin; metalloprot 48.1 6.3 0.00021 28.4 1.2 29 26-56 26-69 (81)
155 1zfo_A LAsp-1; LIM domain, zin 47.9 7 0.00024 22.5 1.2 13 29-41 4-16 (31)
156 2gnr_A Conserved hypothetical 47.7 4.9 0.00017 32.1 0.6 24 28-56 47-70 (145)
157 2jny_A Uncharacterized BCR; st 47.2 2.7 9.3E-05 29.2 -0.9 35 29-66 11-45 (67)
158 3k1f_M Transcription initiatio 45.8 5.3 0.00018 33.2 0.5 28 29-56 22-51 (197)
159 1yk4_A Rubredoxin, RD; electro 45.3 7.8 0.00027 25.4 1.2 10 47-56 35-44 (52)
160 3po3_S Transcription elongatio 44.6 6.7 0.00023 32.5 1.0 32 28-59 137-177 (178)
161 2aus_D NOP10, ribosome biogene 44.0 9 0.00031 26.0 1.4 23 27-56 4-26 (60)
162 6rxn_A Rubredoxin; electron tr 43.2 11 0.00038 24.1 1.6 25 30-56 6-39 (46)
163 3k7a_M Transcription initiatio 42.5 7.8 0.00027 35.2 1.2 38 28-73 21-61 (345)
164 1s24_A Rubredoxin 2; electron 42.0 8.7 0.0003 28.1 1.1 28 26-56 34-77 (87)
165 4rxn_A Rubredoxin; electron tr 41.2 10 0.00034 25.2 1.2 10 47-56 36-45 (54)
166 4bbr_M Transcription initiatio 39.9 7.3 0.00025 35.5 0.5 27 29-55 22-50 (345)
167 2ct7_A Ring finger protein 31; 39.2 7.9 0.00027 27.8 0.5 25 30-55 27-51 (86)
168 3u50_C Telomerase-associated p 38.3 7.9 0.00027 31.9 0.4 28 27-56 41-68 (172)
169 1vd4_A Transcription initiatio 37.7 11 0.00037 24.5 1.0 29 29-57 15-49 (62)
170 2zkr_2 60S ribosomal protein L 36.0 13 0.00046 27.5 1.3 26 27-56 15-40 (97)
171 3j21_g 50S ribosomal protein L 35.6 15 0.00052 24.0 1.4 23 29-56 15-37 (51)
172 2e72_A POGO transposable eleme 35.3 14 0.00047 23.9 1.1 22 46-67 11-32 (49)
173 3lqh_A Histone-lysine N-methyl 35.3 24 0.0008 29.2 2.9 36 27-62 20-69 (183)
174 3pur_A Lysine-specific demethy 34.8 16 0.00056 35.2 2.1 37 19-55 46-93 (528)
175 2gmg_A Hypothetical protein PF 34.6 14 0.00048 27.9 1.3 26 29-56 68-93 (105)
176 3s5p_A Ribose 5-phosphate isom 34.6 6.5 0.00022 32.2 -0.6 89 52-163 27-127 (166)
177 3u6x_S ORF48; helix/beta, rece 34.4 24 0.00082 25.6 2.4 25 213-237 64-88 (105)
178 2f9i_A Acetyl-coenzyme A carbo 33.8 58 0.002 29.3 5.5 51 156-206 115-171 (327)
179 2kpi_A Uncharacterized protein 32.4 6.8 0.00023 26.1 -0.7 26 30-58 12-39 (56)
180 2f9y_A Acetyl-COA carboxylase, 32.3 62 0.0021 29.3 5.5 51 156-206 129-185 (339)
181 3eef_A N-carbamoylsarcosine am 32.1 43 0.0015 26.9 4.1 35 132-166 13-51 (182)
182 1vk6_A NADH pyrophosphatase; 1 31.4 13 0.00045 32.5 0.7 25 29-54 108-132 (269)
183 3lqy_A Putative isochorismatas 30.6 97 0.0033 25.0 6.0 47 120-166 4-60 (190)
184 1we9_A PHD finger family prote 29.5 18 0.00062 24.1 1.1 33 24-56 18-58 (64)
185 3k7p_A Ribose 5-phosphate isom 29.4 16 0.00053 30.3 0.8 75 52-130 28-113 (179)
186 4g41_A MTA/SAH nucleosidase; m 28.9 1.1E+02 0.0038 25.2 6.3 47 114-169 38-84 (236)
187 3r8s_0 50S ribosomal protein L 28.7 14 0.00048 24.5 0.4 23 27-56 26-48 (56)
188 3sgw_A Ribose 5-phosphate isom 27.9 19 0.00065 29.9 1.1 94 49-164 32-139 (184)
189 1pqv_S STP-alpha, transcriptio 27.7 17 0.00059 32.6 0.9 32 28-59 268-308 (309)
190 2d9k_A FLN29 gene product; zin 27.1 15 0.0005 25.2 0.2 28 29-56 18-52 (75)
191 1qxf_A GR2, 30S ribosomal prot 26.5 18 0.00062 24.9 0.6 26 28-55 7-34 (66)
192 1vi6_A 30S ribosomal protein S 26.3 39 0.0013 28.5 2.8 21 147-167 128-148 (208)
193 2l7x_A Envelope glycoprotein; 26.2 28 0.00095 24.3 1.5 31 26-56 6-39 (77)
194 2k2d_A Ring finger and CHY zin 25.6 18 0.00062 25.7 0.5 31 26-57 35-65 (79)
195 2xb1_A Pygopus homolog 2, B-ce 25.2 17 0.00057 27.2 0.3 41 24-64 15-69 (105)
196 2qkd_A Zinc finger protein ZPR 25.1 16 0.00055 34.2 0.2 30 27-56 219-258 (404)
197 3fgn_A Dethiobiotin synthetase 25.1 1.2E+02 0.004 26.0 5.8 48 149-206 149-196 (251)
198 2d74_B Translation initiation 25.1 28 0.00094 27.9 1.5 36 28-63 104-141 (148)
199 3bsf_A AT4G34840, nucleosidase 25.0 1.5E+02 0.0053 24.9 6.6 59 110-170 47-107 (254)
200 1wep_A PHF8; structural genomi 24.4 43 0.0015 23.3 2.4 34 24-57 23-64 (79)
201 1im5_A 180AA long hypothetical 24.3 93 0.0032 24.8 4.7 27 140-166 27-53 (180)
202 3hu5_A Isochorismatase family 23.9 1.2E+02 0.0043 24.7 5.6 47 119-165 4-58 (204)
203 2vpb_A Hpygo1, pygopus homolog 23.3 17 0.00058 24.8 -0.0 16 23-38 19-35 (65)
204 3kl2_A Putative isochorismatas 23.3 61 0.0021 27.2 3.5 49 118-166 20-81 (226)
205 3bch_A 40S ribosomal protein S 23.2 48 0.0016 28.9 2.8 21 147-167 164-184 (253)
206 3tg2_A Vibriobactin-specific i 23.2 91 0.0031 26.2 4.6 52 118-169 23-81 (223)
207 1ryq_A DNA-directed RNA polyme 23.1 28 0.00095 24.2 1.0 20 29-55 12-31 (69)
208 4h17_A Hydrolase, isochorismat 23.0 1.5E+02 0.005 24.2 5.8 49 119-167 19-73 (197)
209 3ddo_A Urdpase, upase, uridine 22.9 2E+02 0.0068 24.3 6.9 49 111-169 49-97 (253)
210 3cgx_A Putative nucleotide-dip 22.9 88 0.003 26.5 4.5 60 142-216 87-148 (242)
211 2cr8_A MDM4 protein; ZF-ranbp 22.6 20 0.0007 23.4 0.2 27 23-55 7-33 (53)
212 4esj_A Type-2 restriction enzy 22.6 17 0.00057 31.6 -0.2 28 29-56 35-65 (257)
213 3qxc_A Dethiobiotin synthetase 22.5 1.3E+02 0.0045 25.5 5.6 49 149-208 153-201 (242)
214 3cng_A Nudix hydrolase; struct 22.3 21 0.00072 28.8 0.3 28 28-55 3-33 (189)
215 2g2k_A EIF-5, eukaryotic trans 22.2 15 0.0005 30.2 -0.6 42 28-69 96-141 (170)
216 3bbn_B Ribosomal protein S2; s 21.2 41 0.0014 28.9 2.0 37 119-167 154-190 (231)
217 2xbl_A Phosphoheptose isomeras 20.8 98 0.0034 24.6 4.2 27 145-171 131-157 (198)
218 2p4s_A Purine nucleoside phosp 20.8 1.4E+02 0.0047 27.5 5.5 52 113-168 152-203 (373)
219 3j20_W 30S ribosomal protein S 20.5 29 0.00097 23.7 0.6 27 27-55 14-42 (63)
220 3of5_A Dethiobiotin synthetase 20.5 1.4E+02 0.0049 24.8 5.3 48 149-206 132-179 (228)
221 3cc2_Z 50S ribosomal protein L 20.2 24 0.00083 27.0 0.3 28 28-56 60-87 (116)
222 1chd_A CHEB methylesterase; ch 20.1 73 0.0025 26.6 3.3 33 250-282 167-199 (203)
223 2i2w_A Phosphoheptose isomeras 20.1 81 0.0028 25.8 3.6 27 144-170 145-171 (212)
224 3na7_A HP0958; flagellar bioge 20.0 23 0.00079 30.6 0.1 16 28-43 222-237 (256)
225 2f9i_B Acetyl-coenzyme A carbo 20.0 1.4E+02 0.0049 26.1 5.3 47 156-204 119-165 (285)
No 1
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=100.00 E-value=9.1e-75 Score=528.59 Aligned_cols=276 Identities=39% Similarity=0.695 Sum_probs=251.6
Q ss_pred CccccccC---CCCCCCcccccCCCCchhhhcccccccccchhhccccccccccccCCCCCCHHHHHHhhcCCCceEEec
Q psy5220 2 NWLKNYSF---PNLQKNNAFVKKSIPKGLWIKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIG 78 (286)
Q Consensus 2 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~ 78 (286)
|||++..+ +++.. ..++++|+++|+|||+|++++|.++|+.|+++||.|+||+++++|+||+.|+|+|||.|++
T Consensus 4 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~~kc~~~~~~~y~~~l~~~~~v~p~~~~~~r~~arerI~~L~D~gsF~El~ 80 (285)
T 2f9i_B 4 DFFNRTKKKKYLTVQD---SKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFD 80 (285)
T ss_dssp -------------------------CCSSEEECTTTCCEEEHHHHHHTTTBCTTTCCBCCCCHHHHHHHTSCTTCCEEES
T ss_pred hhhhhhhhcccccccc---ccccCCChHHHHhhHhhCCccchhhhHHhcCcCCCCCCCCCCCHHHHHHHHccCCCcEEEC
Confidence 89987532 23332 2567899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCC
Q psy5220 79 ENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKI 158 (286)
Q Consensus 79 ~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~i 158 (286)
.+..+.||++|+ .|++||++++++++++++||||+|+|+|++|+|++||++|+|||+++++++|++|++++|.++++
T Consensus 81 ~~~~~~~~l~f~---~y~~~l~~~~~~t~~~~avVtG~g~I~G~~V~v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~~l 157 (285)
T 2f9i_B 81 KGMTSANPLDFP---SYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRL 157 (285)
T ss_dssp TTCEECCTTCCT---THHHHHHHHHHHHCCSSSEEEEEEEETTEEEEEEEECTTTGGGCCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCcCcCCccccc---chhHHHHHHhhccCCCCeEEEEEEEECCEEEEEEEEccccccCcCCHHHHHHHHHHHHHHHHcCC
Confidence 999999999996 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhhhh
Q psy5220 159 PFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRVIK 238 (286)
Q Consensus 159 PlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~vi~ 238 (286)
|+|+|+||||+|+|||+.+++||+++++++.+++++++|+|+||+|+|+||+++++++++|+++|||+|.|+|+||++++
T Consensus 158 PlI~l~dsgGar~qEGi~sl~q~aki~~~l~~~s~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~vi~ 237 (285)
T 2f9i_B 158 PFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIE 237 (285)
T ss_dssp CEEEEEEECSCCGGGHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHHHH
T ss_pred CEEEEEeCCCcchhhhhhhHhHHHHHHHHHHHHHcCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhc
Q psy5220 239 NTVKEKLPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 239 ~~~g~~l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
+++++++++++++|++|+++|+||.||+++|+++.|+++|+++..
T Consensus 238 ~~~~~~~~e~~~~Ae~~~~~G~iD~Iv~~~e~r~~l~~~L~~l~~ 282 (285)
T 2f9i_B 238 QTINEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQE 282 (285)
T ss_dssp HHHTSCCCTTTTBHHHHHHTTCCSEECCGGGHHHHHHHHHHHTCC
T ss_pred HHhcccchHhHhhHHHHHhcCCccEEeChHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999853
No 2
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=100.00 E-value=2.5e-72 Score=517.25 Aligned_cols=281 Identities=54% Similarity=0.974 Sum_probs=246.5
Q ss_pred CCccccccCCCCCCCcccccCCCCchhhhcccccccccchhhccccccccccccCCCCCCHHHHHHhhcCCCceEEecCC
Q psy5220 1 MNWLKNYSFPNLQKNNAFVKKSIPKGLWIKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGEN 80 (286)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~ 80 (286)
|+||++..++ + .+. .++++|+++|+|||+|++.+|.+||+.|++|||+|+||+++++|+||+.|+|+|||.|++.+
T Consensus 1 ~~~~~~~~~~-~-~~~--~~~~~~~~l~~kc~~~~~~~~~~~l~~~~~v~~~~~~~~r~~arerI~~L~D~gsF~E~~~~ 76 (304)
T 2f9y_B 1 MSWIERIKSN-I-TPT--RKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSE 76 (304)
T ss_dssp --------------------------CEECCTTTCCCEETTHHHHTTTBCTTTCCBCCCCHHHHHHHHSCSSCCEECSCS
T ss_pred Cchhhccccc-c-ccc--ccCCCCHHHHHhhhhccchhhHHHHHHHhCCCCCCCCCCCCCHHHHHHHHCCCCcEEEECCc
Confidence 8999874232 2 222 56779999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcE
Q psy5220 81 ILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPF 160 (286)
Q Consensus 81 ~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPl 160 (286)
+.+.||++|.|++.|++||++++++++++++||||+|+|+|++|+|+++||+|+||+++..+++|++|++++|.++++|+
T Consensus 77 ~~~~~~~~f~d~~~y~~~l~~~~~~t~~~~avvtG~g~i~G~~V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~~~Pv 156 (304)
T 2f9y_B 77 LEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPL 156 (304)
T ss_dssp CCCCCSSCCSSGGGTC------CCSSCCSSSEEEEECEETTEECBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHHTCCE
T ss_pred cccCCccccccccChHHHHHHHHhccCCCCcEEEEEEEECCEEEEEEEEcCccccCCCCHHHHHHHHHHHHHHHhCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhhhhhh
Q psy5220 161 VCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRVIKNT 240 (286)
Q Consensus 161 V~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~vi~~~ 240 (286)
|+|+||||+||||+..+++++++++.++.+++++++|+|++|+|+|+|||++++++++|++||+++|+|+++||++++++
T Consensus 157 I~l~~sGGarlqeg~~~l~~~~~i~~al~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~Gp~~i~~~ 236 (304)
T 2f9y_B 157 ICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQT 236 (304)
T ss_dssp EEEEEESSBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEeecHHHHHHH
Confidence 99999999999999888889999999999998899999999999999999889999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 241 VKEKLPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 241 ~g~~l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
+|+++++++++|++|.++|+||.|++++++++.++++|++|+..|
T Consensus 237 ig~~l~~~~~~Ae~~~~~Glvd~Vv~~~el~~~l~~ll~~l~~~~ 281 (304)
T 2f9y_B 237 VREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLP 281 (304)
T ss_dssp HTSCCCTTTTBHHHHGGGTCCSEECCHHHHHHHHHHHHHHHTTCC
T ss_pred hCccCCcccCCHHHHHhcCCccEEeCcHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999998643
No 3
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=100.00 E-value=2.3e-49 Score=388.57 Aligned_cols=220 Identities=24% Similarity=0.337 Sum_probs=205.2
Q ss_pred cccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEEE
Q psy5220 50 CTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAVF 129 (286)
Q Consensus 50 c~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a~ 129 (286)
..+.+.++++++||||+.|+|+|||.|++....+.+ ++|. .++++.++++||||+|+|+|++|+|+++
T Consensus 48 ~~~~~~~gkltareRi~~LlD~gsF~E~~~~~~~~~-~~f~-----------~~~~~~~~dgvVtG~G~I~Gr~v~v~a~ 115 (548)
T 2bzr_A 48 VEKVHAKGKLTARERIYALLDEDSFVELDALAKHRS-TNFN-----------LGEKRPLGDGVVTGYGTIDGRDVCIFSQ 115 (548)
T ss_dssp HHHHHHTTCCCHHHHHHHHSCTTCCEEESTTCCCCC-CSTT-----------GGGCCCTTTTEEEEEEEETTEEEEEEEE
T ss_pred HHHHHhcCCCCHHHHHHHhcCCCceEEeCCccccCC-Cccc-----------cccccCCCCcEEEEEEEECCEEEEEEEE
Confidence 445677899999999999999999999999887764 6774 3467889999999999999999999999
Q ss_pred cCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchh
Q psy5220 130 EFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGG 209 (286)
Q Consensus 130 d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GG 209 (286)
||+|+|||||+.+++|++|++++|.+.++|+|+|+||||+|||||..+++||++++.++.++ ++.+|+|+||+|||+||
T Consensus 116 D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSGGARmqeg~~sl~~~~~i~~~~~~~-s~~iP~Isvv~gp~~GG 194 (548)
T 2bzr_A 116 DATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARIQEGVVSLGLYSRIFRNNILA-SGVIPQISLIMGAAAGG 194 (548)
T ss_dssp CTTSGGGCCCHHHHHHHHHHHHHHHHHTCCEEEEECCCSCCGGGTTHHHHHHHHHHHHHHHT-TTTSCEEEEECSEEESG
T ss_pred cCccccCCCChhHHHHHHHHHHHHHHcCCCEEEEEcCCCCCchhHHHHHHHHHHHHHHHHHh-cCCCcEEEEecCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999988887 47899999999999999
Q ss_pred hhhhccccccEEEEcCC-cEEEeeChhhhhhhhhccCC-CCCCCHHHHH-HcCccceEeCch-hHHHHHHHHHHHHhc
Q psy5220 210 VSASFAFMGDIVIAEPG-ALIGFAGPRVIKNTVKEKLP-DGFQSSEFLL-KKGALDMIIDRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 210 g~~s~a~~~d~via~~~-A~i~~~gp~vi~~~~g~~l~-~~~~~A~~~~-~~G~vD~Vv~~~-e~~~~l~~~L~~l~~ 283 (286)
++++++ ++|++||+++ |.|+|+||++|++++|++++ +++++|++|+ ++|++|.|++++ ++++.++++|++|+.
T Consensus 195 ~a~s~a-l~D~ii~~~~~a~i~~aGP~vI~~~~ge~v~~e~lggae~h~~~sG~~d~vv~d~~~~~~~~r~lls~lp~ 271 (548)
T 2bzr_A 195 HVYSPA-LTDFVIMVDQTSQMFITGPDVIKTVTGEEVTMEELGGAHTHMAKSGTAHYAASGEQDAFDYVRELLSYLPP 271 (548)
T ss_dssp GGHHHH-HSSEEEEETTTCEEESSCHHHHHHHHCCCCCHHHHHBHHHHHHTSSCCSEEESSHHHHHHHHHHHHTTSCS
T ss_pred HHHHHH-hCCeEEeccCceeEEeccHHHHHHHhCCcCChHhcccHHHHhhccCceeEEeCCHHHHHHHHHHHHHhcCc
Confidence 999998 6999999997 99999999999999999999 5899999998 599999999976 899999999999985
No 4
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=100.00 E-value=1.7e-49 Score=388.19 Aligned_cols=220 Identities=29% Similarity=0.440 Sum_probs=204.6
Q ss_pred cccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEEE
Q psy5220 50 CTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAVF 129 (286)
Q Consensus 50 c~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a~ 129 (286)
..+.+.++++++||||+.|+|+|||.|++.+..+.+ ++|. .++++.++++||||+|+|+|++|+|+++
T Consensus 35 ~~~~~~~g~l~areRi~~LlD~gsF~E~~~~~~~~~-~~f~-----------l~~~~~~~dgvvtG~G~I~Gr~v~v~a~ 102 (523)
T 1on3_A 35 VEKQHSQGKQTARERLNNLLDPHSFDEVGAFRKHRT-TLFG-----------MDKAVVPADGVVTGRGTILGRPVHAASQ 102 (523)
T ss_dssp HHHHHHTTCCCHHHHHHHHSCTTCCEEECTTCCCCC-CTTT-----------TTTCCCGGGGEEEEEEEETTEEEEEEEE
T ss_pred HHHHHhcCCCCHHHHHHHhcCCCccEEeCCccccCC-Cccc-----------cccccCCCCcEEEEEEEECCEEEEEEEE
Confidence 445677899999999999999999999999888765 6773 2456788999999999999999999999
Q ss_pred cCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchh
Q psy5220 130 EFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGG 209 (286)
Q Consensus 130 d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GG 209 (286)
||+|+|||||+.+++|++|++++|.+.++|+|+|+||||+|||||+.+++||++++.++..+ ++.+|+|+||+|||+||
T Consensus 103 D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~~SGGARmqeg~~sl~~~~~i~~~~~~~-s~~iP~Isvv~gp~~GG 181 (523)
T 1on3_A 103 DFTVMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARIQEGIDSLSGYGKMFFANVKL-SGVVPQIAIIAGPCAGG 181 (523)
T ss_dssp CTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHH-TTTSCEEEEEEEEEESG
T ss_pred cCCccCCcCcHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCChhhHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999988877 47899999999999999
Q ss_pred hhhhccccccEEEEcCCcEEEeeChhhhhhhhhccCC-CCCCCHHHHH-HcCccceEeCch-hHHHHHHHHHHHHhc
Q psy5220 210 VSASFAFMGDIVIAEPGALIGFAGPRVIKNTVKEKLP-DGFQSSEFLL-KKGALDMIIDRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 210 g~~s~a~~~d~via~~~A~i~~~gp~vi~~~~g~~l~-~~~~~A~~~~-~~G~vD~Vv~~~-e~~~~l~~~L~~l~~ 283 (286)
++++++ ++|++||+|+|.|+|+||++|++++|++++ +++++|++|+ ++|++|.|++++ ++++.++++|++|+.
T Consensus 182 ~a~s~~-l~D~ii~~~~a~i~~aGP~vI~~~~ge~~~~e~lggae~h~~~~G~vd~vv~d~~~~~~~~r~lL~~lp~ 257 (523)
T 1on3_A 182 ASYSPA-LTDFIIMTKKAHMFITGPQVIKSVTGEDVTADELGGAEAHMAISGNIHFVAEDDDAAELIAKKLLSFLPQ 257 (523)
T ss_dssp GGHHHH-HSSEEEEETTCEEESSCHHHHHHHHCCCCCHHHHHSHHHHHHTTCCCSEEESSHHHHHHHHHHHHHTSCS
T ss_pred HHHHHh-hCCeEEEeCCCEEEecCHHHHHHHhCCcCChHhcccHHHHhhccCceEEEeCCHHHHHHHHHHHHHhcCc
Confidence 999885 699999999999999999999999999999 5899999998 599999999976 899999999999985
No 5
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=100.00 E-value=3e-49 Score=386.64 Aligned_cols=220 Identities=24% Similarity=0.364 Sum_probs=204.7
Q ss_pred cccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEEE
Q psy5220 50 CTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAVF 129 (286)
Q Consensus 50 c~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a~ 129 (286)
..+.+.++++++||||+.|+|+|||.|++.+..+.+ ++|. .++++.++++||||+|+|+|++|+|+++
T Consensus 31 ~~~~~~~g~l~areRi~~LlD~gsf~E~~~~~~~~~-~~f~-----------~~~~~~~~dgvvtG~G~i~Gr~v~v~a~ 98 (522)
T 1x0u_A 31 IQFQHSKGKLTARERLALLFDDGKFNEIMTFATTRA-TEFG-----------LDKQRFYGDGVVTGWGKVDGRTVFAYAQ 98 (522)
T ss_dssp HHHHHTTTCCCHHHHHHHHSSSSCCEESSSSCCCCC-CGGG-----------TTTCCCTTTTEEEEEEEETTEEEEEEEE
T ss_pred HHHHHhcCCCCHHHHHHHhccCCccEEeCCcccCCC-Cccc-----------cccccCCCCcEEEEEEEECCEEEEEEEe
Confidence 445678899999999999999999999999887764 5663 2457889999999999999999999999
Q ss_pred cCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchh
Q psy5220 130 EFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGG 209 (286)
Q Consensus 130 d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GG 209 (286)
||+|+|||||+.+++|++|++++|.+.++|+|.|+||||+|||||+.+++||++++.++..+ ++.+|+|+||+|||+||
T Consensus 99 D~t~~gGS~g~~~~~Ki~ra~e~A~~~~~P~I~l~~SGGaRmqeg~~sl~~~~~i~~~~~~~-s~~iP~Isvv~gp~~GG 177 (522)
T 1x0u_A 99 DFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGAVFKMNVMA-SGVIPQITIMAGPAAGG 177 (522)
T ss_dssp CTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHH-TTTSCEEEEECSEEEGG
T ss_pred cCceeCccccHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCChhHHHHHHHHHHHHHHHHHHh-CCCCcEEEEEcCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999988877 47899999999999999
Q ss_pred hhhhccccccEEEEcCC-c-EEEeeChhhhhhhhhccCC-CCCCCHHHHH-HcCccceEeCch-hHHHHHHHHHHHHhc
Q psy5220 210 VSASFAFMGDIVIAEPG-A-LIGFAGPRVIKNTVKEKLP-DGFQSSEFLL-KKGALDMIIDRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 210 g~~s~a~~~d~via~~~-A-~i~~~gp~vi~~~~g~~l~-~~~~~A~~~~-~~G~vD~Vv~~~-e~~~~l~~~L~~l~~ 283 (286)
++++++ ++|++||+|+ | .|+|+||++|++++|++++ +++++|++|+ ++|++|.|++++ ++++.++++|++|+.
T Consensus 178 ~a~s~~-l~D~~i~~~~~a~~i~~aGP~vI~~~~ge~~~~e~lggae~~~~~~G~~d~vv~~~~~~~~~~~~ll~~lp~ 255 (522)
T 1x0u_A 178 AVYSPA-LTDFIIMIKGDAYYMFVTGPEITKVVLGEEVSFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLPS 255 (522)
T ss_dssp GGHHHH-HSSEEEEECSTTCEEESSCHHHHHHTTCCCCCHHHHHBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHh-cCCeEEEecCCccEEEecCHHHHHHHhCCcCChhhcchHHHHhhcCceeEEEeCCHHHHHHHHHHHHHhccc
Confidence 999986 6999999998 9 9999999999999999999 5899999998 599999999976 899999999999985
No 6
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=100.00 E-value=1.2e-47 Score=374.50 Aligned_cols=221 Identities=26% Similarity=0.375 Sum_probs=203.0
Q ss_pred ccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEE
Q psy5220 49 VCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAV 128 (286)
Q Consensus 49 vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a 128 (286)
...+.+.++++++||||+.|+|+|||.|++....+.++ +|. .++++.++++||||+|+|+|++|+|++
T Consensus 36 ~~~~~~~~gkl~aReRI~~LlD~gSF~E~~~~~~~~~~-~f~-----------~~~~~~~~dgvVtG~G~I~Gr~v~v~a 103 (530)
T 3iav_A 36 AVEKQHAKGKLTARERIDLLLDEGSFVELDEFARHRST-NFG-----------LDANRPYGDGVVTGYGTVDGRPVAVFS 103 (530)
T ss_dssp HHHHHHHTTCCCHHHHHHHHSCTTCCEEESTTCCCCCC-GGG-----------GGGCCCTTTTEEEEEEEETTEEEEEEE
T ss_pred HHHHHHhcCCCCHHHHHHHhcCCCCeEEcCCccccCCC-Ccc-----------cccccCCCCcEEEEEEEECCEEEEEEE
Confidence 34456778999999999999999999999998877653 442 345778999999999999999999999
Q ss_pred EcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcch
Q psy5220 129 FEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMG 208 (286)
Q Consensus 129 ~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~G 208 (286)
+||+|+|||+|+.+++|++|++++|.+.++|+|+|+||||+|||||+.+++++++++.++.+++. .+|+|+||+|+|+|
T Consensus 104 ~D~tv~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSgGaRmqEg~~~l~~~~~i~~~~~~~s~-~iP~Isvv~G~~~G 182 (530)
T 3iav_A 104 QDFTVFGGALGEVYGQKIVKVMDFALKTGCPVVGINDSGGARIQEGVASLGAYGEIFRRNTHASG-VIPQISLVVGPCAG 182 (530)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHTTT-TSCEEEEECSEEEG
T ss_pred ECCCcceEeccHHHHHHHHHHHHHHHHcCCCEEEEEcCCCcchhhhhhhHHHHHHHHHHHHHHcC-CCCEEEEEecCcch
Confidence 99999999999999999999999999999999999999999999999999999999999988875 59999999999999
Q ss_pred hhhhhccccccEEEEcCC-cEEEeeChhhhhhhhhccCC-CCCCCHHHHH-HcCccceEeCch-hHHHHHHHHHHHHhc
Q psy5220 209 GVSASFAFMGDIVIAEPG-ALIGFAGPRVIKNTVKEKLP-DGFQSSEFLL-KKGALDMIIDRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 209 Gg~~s~a~~~d~via~~~-A~i~~~gp~vi~~~~g~~l~-~~~~~A~~~~-~~G~vD~Vv~~~-e~~~~l~~~L~~l~~ 283 (286)
|++++++ ++|++||.++ |.|+++||++|++++|++++ +++++|+.|. .+|++|.+++++ ++.+.++++|++|+.
T Consensus 183 G~a~~~a-l~D~~im~~~~a~i~~aGP~vi~~~~ge~v~~e~LGGa~~h~~~sGv~d~va~de~~a~~~~r~~ls~lp~ 260 (530)
T 3iav_A 183 GAVYSPA-ITDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPS 260 (530)
T ss_dssp GGGHHHH-HSSEEEEETTTCEEESSCHHHHHHHHCCCCCHHHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHH-hCCEEEEecCCcEEEecCHHHHHHHhCCcCChhhcchHHHHHhccCceeEEecChHHHHHHHHHHHHhccc
Confidence 9999998 5899998665 99999999999999999998 6899999995 699999999997 899999999999986
No 7
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=100.00 E-value=1.7e-47 Score=373.22 Aligned_cols=221 Identities=21% Similarity=0.315 Sum_probs=201.6
Q ss_pred ccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEE
Q psy5220 49 VCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAV 128 (286)
Q Consensus 49 vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a 128 (286)
...+.+.++++++||||+.|+|+|||.|++.+..+ ++++|+. | ++..++++||||+|+|+|++|+|++
T Consensus 44 ~~~~~~~~gkltaReRI~~LlD~gSF~E~~~~~~~-~~~~~~~---~--------~~~~~~dgVVtG~G~I~Gr~v~v~a 111 (531)
T 3n6r_B 44 RIDAQHGRGKLTARERVDLLLDEGSFEEFDMFVTH-RCTDFNM---Q--------DQKPAGDGVVTGWGTINGRVVYVFS 111 (531)
T ss_dssp HHHHHHHTTCCCHHHHHHHHSSSSCCEEECTTCCC-CCCGGGG---G--------GCCCTTTTEEEEEEEETTEEEEEEE
T ss_pred HHHHHHhcCCCCHHHHHHHhcCCCceEEcCCcccc-CCccccc---c--------cccCCCCCEEEEEEEECCEEEEEEE
Confidence 34456778999999999999999999999998754 3456642 4 2345799999999999999999999
Q ss_pred EcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcch
Q psy5220 129 FEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMG 208 (286)
Q Consensus 129 ~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~G 208 (286)
+||+|+|||+++.+++|++|++++|.+.++|+|.|+||||+|||||+.+++++++++.++.+++ +.+|+|+||+|+|+|
T Consensus 112 ~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lPvI~l~dSGGARmqeg~~sl~~~~~i~~~~~~~s-~~iP~Isvv~Gp~~G 190 (531)
T 3n6r_B 112 QDFTVLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGEVFQRNIMAS-GVVPQISMIMGPCAG 190 (531)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGTHHHHHHHHHHHHHHHHTT-TTSCEEEEECSCCBG
T ss_pred ECCCcccccccHHHHHHHHHHHHHHHHcCCCEEEEeCCCccccCcccchhhhHHHHHHHHHHHh-CCCCEEEEEeCCcch
Confidence 9999999999999999999999999999999999999999999999999999999999888887 689999999999999
Q ss_pred hhhhhccccccEEEEcCC-cEEEeeChhhhhhhhhccCC-CCCCCHHHHH-HcCccceEeCch-hHHHHHHHHHHHHhc
Q psy5220 209 GVSASFAFMGDIVIAEPG-ALIGFAGPRVIKNTVKEKLP-DGFQSSEFLL-KKGALDMIIDRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 209 Gg~~s~a~~~d~via~~~-A~i~~~gp~vi~~~~g~~l~-~~~~~A~~~~-~~G~vD~Vv~~~-e~~~~l~~~L~~l~~ 283 (286)
|++++++| +|++||.++ |.|+|+||++|++++|++++ +++++|+.|. ++|++|.+++++ ++.+.++++|++|+.
T Consensus 191 G~a~s~a~-~D~vi~~~~~a~i~~aGP~vI~~~~ge~v~~E~LGGa~~h~~~sG~~d~v~~~e~~a~~~~r~lls~Lp~ 268 (531)
T 3n6r_B 191 GAVYSPAM-TDFIFMVKDSSYMFVTGPDVVKTVTNEQVSAEELGGATTHTRKSSVADAAFENDVEALAEVRRLVDFLPL 268 (531)
T ss_dssp GGGHHHHH-SSEEEEETTTCBCBSSCHHHHHHHHCCCCCHHHHHBHHHHHHTTSCCSEEESSHHHHHHHHHHHHTTSCS
T ss_pred HHHHHhhh-CCEEEEecCCceEeecCHHHHHHHhCCccChhhcchHHHHhhccCcceEEeCCHHHHHHHHHHHHHhccc
Confidence 99999997 899999886 99999999999999999998 6788999995 699999999996 899999999999975
No 8
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=1.4e-47 Score=375.09 Aligned_cols=220 Identities=26% Similarity=0.362 Sum_probs=203.6
Q ss_pred cccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEEE
Q psy5220 50 CTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAVF 129 (286)
Q Consensus 50 c~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a~ 129 (286)
..+.+.++++++||||+.|+|+|||.|++....+.| ++|.. ++++.++++||||+|+|+|++|+|+++
T Consensus 38 ~~~~~~~g~l~areRi~~LlD~gsF~E~~~~~~~~~-~~f~~-----------~~~~~~~dgvVtG~G~i~Gr~v~v~a~ 105 (527)
T 1vrg_A 38 VEKQHRAGKLTAWERLELLLDPGTFVEIDKFVEHRN-TYFGL-----------DKVKLPRDGVITGVGEINGRKVAVFSQ 105 (527)
T ss_dssp HHHHHHTTCCCHHHHHHHHSCTTCCEEECTTCCCCC-CGGGG-----------GGCCCGGGGEEEEEEEETTEEEEEEEE
T ss_pred HHHHHhcCCCCHHHHHHHHccCCceEEcccccccCC-cccCc-----------ccccCCCCcEEEEEEEECCEEEEEEEE
Confidence 344567899999999999999999999999887765 56631 356788999999999999999999999
Q ss_pred cCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchh
Q psy5220 130 EFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGG 209 (286)
Q Consensus 130 d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GG 209 (286)
||+|+|||+++.+++|++|++++|.++++|+|+|+||||+||||+..+++++++++.++..+ ++.+|+|++|+|+|+||
T Consensus 106 D~t~~gGS~g~~~~~Ki~r~~e~A~~~~lPvI~l~dSgGAR~qeg~~~l~g~~~~~~~~~~~-s~~iP~Isvv~Gp~~GG 184 (527)
T 1vrg_A 106 DFTVMGGSLGEMHAKKIVKLLDLALKMGIPVIGINDSGGARIQEGVDALAGYGEIFLRNTLA-SGVVPQITVIAGPCAGG 184 (527)
T ss_dssp CTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHH-TTTSCEEEEEEEEEBGG
T ss_pred eccccCccccHHHHHHHHHHHHHHHHcCCCEEEEECCCCCCccchhHHHHHHHHHHHHHHHh-CCCCCEEEEEeCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999988776 57899999999999999
Q ss_pred hhhhccccccEEEEcCC-cEEEeeChhhhhhhhhccCC-CCCCCHHHHH-HcCccceEeCch-hHHHHHHHHHHHHhc
Q psy5220 210 VSASFAFMGDIVIAEPG-ALIGFAGPRVIKNTVKEKLP-DGFQSSEFLL-KKGALDMIIDRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 210 g~~s~a~~~d~via~~~-A~i~~~gp~vi~~~~g~~l~-~~~~~A~~~~-~~G~vD~Vv~~~-e~~~~l~~~L~~l~~ 283 (286)
++++++ ++|++||+++ |.|+|+||++|++++|++++ +++++|++|+ ++|++|.|++++ ++++.++++|++|+.
T Consensus 185 ~a~s~a-l~D~vi~~~~~a~i~~aGP~vi~~~~ge~v~~e~lggae~~~~~~G~vd~vv~d~~~~~~~~~~~Ls~lp~ 261 (527)
T 1vrg_A 185 AVYSPA-LTDFIVMVDQTARMFITGPNVIKAVTGEEISQEDLGGAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYLPS 261 (527)
T ss_dssp GGHHHH-HSSEEEEETTTCBCBSSCHHHHHHHHCCCCCHHHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHTTSCS
T ss_pred HHHHHH-cCCeEEEecCceEEEecCHHHHHHHhCCCCCccccccHHHHhhcccceEEEecCHHHHHHHHHHHHHhcCc
Confidence 999998 6999999998 99999999999999999999 5899999999 699999999976 899999999999985
No 9
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=7.1e-45 Score=358.96 Aligned_cols=216 Identities=13% Similarity=0.166 Sum_probs=196.3
Q ss_pred cccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEE
Q psy5220 48 QVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVA 127 (286)
Q Consensus 48 ~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~ 127 (286)
....+.+.++++++||||+.|+|+|||.|++.. |.+ .++++ ++++||||+|+|+|++|+|+
T Consensus 50 ~~~~~~~~~gkltareRI~~LlD~gsF~E~~~~--------y~~----------~~~~~-~~dgvVtG~G~I~Gr~v~v~ 110 (587)
T 1pix_A 50 KADADVNKRGELTALQRIEKLVEPGSWRPLNTL--------FNP----------QGNKN-GSVAIVKGLGRVNGKWCVVV 110 (587)
T ss_dssp SCHHHHHHTTCCCHHHHHHHHSCTTCCEEESTT--------CCT----------TCCTT-SCCSEEEEEEEETTEEEEEE
T ss_pred HHHHHHHhcCCCCHHHHHHHHcCCCCceEhhhh--------cch----------hhhcC-CCCcEEEEEEEECCEEEEEE
Confidence 334566788999999999999999999999973 321 11233 79999999999999999999
Q ss_pred EEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHH---HHHHHHHHHHHHhcCCCCEEEEEcC
Q psy5220 128 VFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLM---QMAKTTAILTKLSKKKIPFISVLTN 204 (286)
Q Consensus 128 a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~---~~~~~~~a~~~l~~~~vP~Isvv~g 204 (286)
++|++|++||+++.+++|++|++++|.++++|+|+|+||||+||||+..+++ ++++++.++.+++..++|+|+||+|
T Consensus 111 a~D~t~~gGs~g~~~~~Ki~r~~e~A~~~~lPvI~l~dSgGArlqe~~~~l~~~~~~g~i~~~~~~ls~~giP~Isvv~G 190 (587)
T 1pix_A 111 ASDNKKLAGAWVPGQAECLLRASDTAKTLHVPLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYG 190 (587)
T ss_dssp EECTTTTTTEECTTHHHHHHHHHHHHHHHTCCEEEEECCCEECGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECS
T ss_pred EECCccccCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCccccchhccccccHHHHHHHHHHHhCCCCCEEEEEec
Confidence 9999999999999999999999999999999999999999999999988774 7899999999999999999999999
Q ss_pred CcchhhhhhccccccEEEEcCCcEEEeeChhhhhh-----------------hhhccCC-CCCCCHHHHH-HcCccceEe
Q psy5220 205 PTMGGVSASFAFMGDIVIAEPGALIGFAGPRVIKN-----------------TVKEKLP-DGFQSSEFLL-KKGALDMII 265 (286)
Q Consensus 205 ~~~GGg~~s~a~~~d~via~~~A~i~~~gp~vi~~-----------------~~g~~l~-~~~~~A~~~~-~~G~vD~Vv 265 (286)
+|+||++++ +|++++++++++|.|+++||++|++ ++|++++ +++++|++|+ ++|++|.|+
T Consensus 191 ~~~GGga~~-a~~d~vim~e~~a~i~~~GP~vi~~~~~~~~~d~~~A~el~~~tge~v~~e~lgga~~h~~~~GvvD~vv 269 (587)
T 1pix_A 191 TNPAGGGYH-SISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYTETGFMREVY 269 (587)
T ss_dssp EEETHHHHH-HHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHHHHHTTCCCCCSSBHHHHTTTSCCSCEEE
T ss_pred CCcHHHHHH-HhcCceEEecCCcEEEecCHHHHhhhccccccchhHHHHHHHHhCCccChhhcccHHHHHhhcCceeEec
Confidence 999999999 9877777788889999999999999 9999998 8899999998 599999999
Q ss_pred Cch-hHHHHHHHHHHHHhc
Q psy5220 266 DRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 266 ~~~-e~~~~l~~~L~~l~~ 283 (286)
+++ ++.+.++++|++++.
T Consensus 270 ~~e~~a~~~~r~~ls~lp~ 288 (587)
T 1pix_A 270 ASEEGVLEGIKKYVGMLPK 288 (587)
T ss_dssp SSHHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHhCCc
Confidence 998 699999999999985
No 10
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=100.00 E-value=3.3e-44 Score=353.30 Aligned_cols=214 Identities=14% Similarity=0.160 Sum_probs=190.4
Q ss_pred cccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEEE
Q psy5220 50 CTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAVF 129 (286)
Q Consensus 50 c~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a~ 129 (286)
..+.+.++++++||||+.|+|+|||.|++.+. .+ | .++.++++||||+|+|+|++|+|+++
T Consensus 53 ~~~~~~~GkltaRERI~~LlD~GSF~El~~~~--------~~---~--------~~~~~~dgVVtG~G~I~Gr~V~V~a~ 113 (588)
T 3gf3_A 53 EEKLNERGQLSAMQRINALIDPGTWCPLNSLF--------NP---E--------NNKFGTTNIVNGLGRVDGKWVYIVAS 113 (588)
T ss_dssp HHHHHHTTCCCHHHHHHHHSCTTCCEEESTTC--------CT---T--------CCTTSSCSEEEEEEEETTEEEEEEEE
T ss_pred HHHHHhcCCCCHHHHHHHHcCCCceEEccccc--------cc---c--------ccCCCCCcEEEEEEEECCEEEEEEEE
Confidence 34557789999999999999999999998742 21 2 13456899999999999999999999
Q ss_pred cCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch--hhchHh-HHHHHHHHHHHHHHhcCCCCEEEEEcCCc
Q psy5220 130 EFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM--QEGLLS-LMQMAKTTAILTKLSKKKIPFISVLTNPT 206 (286)
Q Consensus 130 d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i--~Eg~~~-l~~~~~~~~a~~~l~~~~vP~Isvv~g~~ 206 (286)
||+|+|||+++.+++|++|++++|.++++|+|.|+||||+|| ||++++ ++++++++.++.+++..++|+|+||+|+|
T Consensus 114 D~tv~gGS~g~~~~~Ki~Ra~e~A~~~~lPvI~l~dSgGArl~~qe~~~~~l~~~g~if~~~~~ls~~~iP~Isvv~Gp~ 193 (588)
T 3gf3_A 114 DNKKMAGAWVPGQAENLIRCSDAAKMMHLPLIYLLNCSGVEFPNQDKVYPNRRGGGTPFFRNSELNQLGIPVIVGIYGTN 193 (588)
T ss_dssp CTTSGGGCBCTTHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEE
T ss_pred CCcccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEcCCCcCcccccccccchhhHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 999999999999999999999999999999999999999999 677765 78899999999999989999999999999
Q ss_pred chhhhhhccccccEEEEcCCcEEEeeChhhhh------------------hhhhcc--CCCCCCCHHHHH-HcCccceEe
Q psy5220 207 MGGVSASFAFMGDIVIAEPGALIGFAGPRVIK------------------NTVKEK--LPDGFQSSEFLL-KKGALDMII 265 (286)
Q Consensus 207 ~GGg~~s~a~~~d~via~~~A~i~~~gp~vi~------------------~~~g~~--l~~~~~~A~~~~-~~G~vD~Vv 265 (286)
+|||+++ ++++|++|++++|.|+++||++|+ .++|++ ..+++++|+.|. .+|++|.++
T Consensus 194 ~gGgAy~-a~~~~vim~~~~a~i~~aGP~vI~~~~p~g~~~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~~~sGv~d~~a 272 (588)
T 3gf3_A 194 PAGGGYH-SISPTILIAHQDANMAVGGAGILSGMNPKGYIDDEAAEQIIAAQIENSKLKVPAPGSVPIHYDETGFFREVY 272 (588)
T ss_dssp ETHHHHH-HHSSSEEEEETTCEEESSCCC---------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTSCCSCEEE
T ss_pred CchhhhH-hhCCeEEEEECCcEEEecChhhhcccCccccccccchhhhhhhhccccccChhhccchhhhccccccceEEe
Confidence 9999988 899999999999999999999985 455665 348899999998 699999999
Q ss_pred Cch-hHHHHHHHHHHHHhc
Q psy5220 266 DRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 266 ~~~-e~~~~l~~~L~~l~~ 283 (286)
+++ ++.+.++++|++|++
T Consensus 273 ~de~~al~~~r~~ls~Lp~ 291 (588)
T 3gf3_A 273 QNDLGVIDGIKKYISYLPA 291 (588)
T ss_dssp SSHHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHhCCc
Confidence 987 799999999999975
No 11
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=100.00 E-value=5.6e-44 Score=349.65 Aligned_cols=218 Identities=17% Similarity=0.275 Sum_probs=194.0
Q ss_pred cccccCCCCCCHHHHHHhhcCCCc-eEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEEEEE
Q psy5220 50 CTKCDYHMQIKARDRLNNFLDKNN-FHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLVVAV 128 (286)
Q Consensus 50 c~~~~~~~~~~ar~ri~~L~D~gs-f~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~v~a 128 (286)
..+.+.++++++||||+.|+|+|| |.|++..... +.|.+ ..++++||||+|+|+|++|+|++
T Consensus 65 ~~~~~~~gkltaReRI~~LlD~gS~F~E~~~l~~~---------~~y~~--------~~~~dgVVtG~G~I~Gr~v~V~a 127 (555)
T 3u9r_B 65 QARHSARGKLLVRERINRLLDPGSPFLELSALAAH---------EVYGE--------EVAAAGIVAGIGRVEGVECMIVG 127 (555)
T ss_dssp HHHHHHTTCCCHHHHHHHHSCTTCCEEEECTTTTT---------TTSSS--------CCGGGGEEEEEEEETTEEEEEEE
T ss_pred HHHHHccCCCCHHHHHHHHcCCCCCEEEEcccccc---------ccccc--------cCCCCcEEEEEEEECCEEEEEEE
Confidence 345577899999999999999999 9999875432 12422 23578999999999999999999
Q ss_pred EcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchh--hchHhH-HHHHHHHHHHHHHhcCCCCEEEEEcCC
Q psy5220 129 FEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQ--EGLLSL-MQMAKTTAILTKLSKKKIPFISVLTNP 205 (286)
Q Consensus 129 ~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~--Eg~~~l-~~~~~~~~a~~~l~~~~vP~Isvv~g~ 205 (286)
+||+|+|||+++.+++|+.|++++|.++++|+|+|+||||+|++ ++.+++ .++++++.++.+++..++|+|++|+|+
T Consensus 128 ~D~tv~gGS~g~~~~~Ki~ra~e~A~~~~lPvI~l~dSgGARl~~q~~~~~~~~~~~~i~~~~~~ls~~giP~Isvv~G~ 207 (555)
T 3u9r_B 128 NDATVKGGTYYPLTVKKHLRAQAIALENRLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSARGIPQIAVVMGS 207 (555)
T ss_dssp ECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGGGGTSSSTTSTTHHHHHHHHHHHTTCCEEEEECSC
T ss_pred ECCccccCCCCHHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCcceeecccccHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 99999999999999999999999999999999999999999974 455543 478999999999998899999999999
Q ss_pred cchhhhhhccccccEEEEcCCcEEEeeChhhhhhhhhccCC-CCCCCHHHHH-HcCccceEeCch-hHHHHHHHHHHHHh
Q psy5220 206 TMGGVSASFAFMGDIVIAEPGALIGFAGPRVIKNTVKEKLP-DGFQSSEFLL-KKGALDMIIDRR-KLRFKIANLLALLQ 282 (286)
Q Consensus 206 ~~GGg~~s~a~~~d~via~~~A~i~~~gp~vi~~~~g~~l~-~~~~~A~~~~-~~G~vD~Vv~~~-e~~~~l~~~L~~l~ 282 (286)
|+||++++++|++++++++++|.|+++||++|++++|++++ +++++|+.|. .+|++|.+++++ +..+.++++|++|+
T Consensus 208 ~~GGga~~~a~~d~vim~e~~a~i~~aGP~vik~~~ge~~~~e~LGGa~~h~~~sGv~d~v~~de~~a~~~~r~~ls~Lp 287 (555)
T 3u9r_B 208 CTAGGAYVPAMSDETVMVREQATIFLAGPPLVKAATGEVVSAEELGGADVHCKVSGVADHYAEDDDHALAIARRCVANLN 287 (555)
T ss_dssp CBGGGGHHHHTSSEEEEETTTCBCBSSCHHHHHHHHCCCCCHHHHHBHHHHHHTTCSCSEEESSHHHHHHHHHHHHHTSC
T ss_pred CCccHHHHHHhCCceEEecCCceEEEccHHHHHHHhcCccChhhccchhhhhhccCceeEEeCCHHHHHHHHHHHHHhCC
Confidence 99999999998777788899999999999999999999998 6789999997 699999999987 88899999999998
Q ss_pred cC
Q psy5220 283 KK 284 (286)
Q Consensus 283 ~~ 284 (286)
.+
T Consensus 288 ~~ 289 (555)
T 3u9r_B 288 WR 289 (555)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 12
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=100.00 E-value=8.4e-41 Score=327.01 Aligned_cols=208 Identities=21% Similarity=0.244 Sum_probs=178.1
Q ss_pred ccccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeE
Q psy5220 45 FNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPL 124 (286)
Q Consensus 45 ~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v 124 (286)
....+||+|. +.++++|+||+.|+|+|||.|+..+ ++++||||+|+|+|++|
T Consensus 276 ~l~~v~p~~~-~~~~~~r~~I~~l~D~gsF~E~~~~---------------------------~~~~vVtG~ari~G~~V 327 (522)
T 1x0u_A 276 GVEQIVPNDA-AKPYNMREIIYKIVDNGEFLEVHKH---------------------------WAQNIIVGFARIAGNVV 327 (522)
T ss_dssp SHHHHSCSSS-SCCCCHHHHHHHHSGGGCCEEETTT---------------------------SCTTEEEEEEEETTEEE
T ss_pred hHhhhccCCC-CCCCCHHHHHHHhCCCCceEEecCC---------------------------CcccEEEEEEEECCEEE
Confidence 3468999886 6799999999999999999999862 37899999999999999
Q ss_pred EEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch---hhchHhHHHHHHHHHHHHHHhcCCCCEEEE
Q psy5220 125 VVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM---QEGLLSLMQMAKTTAILTKLSKKKIPFISV 201 (286)
Q Consensus 125 ~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i---~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isv 201 (286)
+|+++|+++++|++++++++|++|++++|.++++|||+|+||+|+++ +|....+.+++++ +..++++++|+|+|
T Consensus 328 ~via~d~~~~gG~l~~~~~~K~ar~i~~a~~~~~Plv~l~ds~G~~~G~~~E~~G~~~~~Ak~---l~~~~~~~vP~Isv 404 (522)
T 1x0u_A 328 GIVANNPEEFGGSIDIDAADKAARFIRFCDAFNIPLISLVDTPGYVPGTDQEYKGIIRHGAKM---LYAFAEATVPKITV 404 (522)
T ss_dssp EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCSHHHHHTTHHHHHHHH---HHHHHHCCSCEEEE
T ss_pred EEEEECCCccCCCcCHHHHHHHHHHHHHHhhCCCCEEEEecCCCCCCchHHHHHHHHHHHHHH---HHHHHhCCCCEEEE
Confidence 99999999999999999999999999999999999999999999987 4432233466665 55667789999999
Q ss_pred EcCCcchhhhhhcc---ccccEEEEcCCcEEEeeChhhhhhhhhcc--------------CCC----CCCCHHHHHHcCc
Q psy5220 202 LTNPTMGGVSASFA---FMGDIVIAEPGALIGFAGPRVIKNTVKEK--------------LPD----GFQSSEFLLKKGA 260 (286)
Q Consensus 202 v~g~~~GGg~~s~a---~~~d~via~~~A~i~~~gp~vi~~~~g~~--------------l~~----~~~~A~~~~~~G~ 260 (286)
|+|+++||++++++ +.+|+++|||+|+++++||+....++..+ +++ .++++++++++|+
T Consensus 405 i~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~gpegaa~Il~r~~i~~~~d~~~~~~~l~~~y~~~~~~~~~~~~~G~ 484 (522)
T 1x0u_A 405 IVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANPYWAAEKGL 484 (522)
T ss_dssp EEEEEEHHHHHHTCCGGGTCSEEEECTTCEEESSCHHHHHHHHTSSSSSSSSSSSSSSHHHHHHHHHHHSSSHHHHHTTS
T ss_pred EeCCcccHHHHHhcccccCCCEEEEeCCCEEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhcCCHHHHHhcCC
Confidence 99999999876664 46999999999999999999754443221 111 2577889999999
Q ss_pred cceEeCchhHHHHHHHHHHHHhc
Q psy5220 261 LDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 261 vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
||.||+++++|+.|.+.|+.+.+
T Consensus 485 iD~II~p~~tR~~L~~~L~~~~~ 507 (522)
T 1x0u_A 485 VDDVIEPKDTRRVIVAGLEMLKT 507 (522)
T ss_dssp SSEECCGGGHHHHHHHHHHHHTT
T ss_pred CcEeECHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999864
No 13
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=100.00 E-value=8.3e-38 Score=291.02 Aligned_cols=229 Identities=16% Similarity=0.111 Sum_probs=190.1
Q ss_pred hhhcccccccccchhhccccccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNT 106 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~ 106 (286)
+..+|....+.+|.+ |... ....-++|+.++++++||+.|||+ |.|+..+ + .|.|
T Consensus 63 ~e~~~~~~~~~~~~~-l~~~-~r~~~~r~~~rp~~re~I~~l~D~--f~El~g~-----~-~~~~--------------- 117 (339)
T 2f9y_A 63 LREKSVELTRKIFAD-LGAW-QIAQLARHPQRPYTLDYVRLAFDE--FDELAGD-----R-AYAD--------------- 117 (339)
T ss_dssp THHHHHTTTTHHHHT-CCHH-HHHHHHTCTTCCCHHHHHHHHCEE--EEECCCC-----S-SSCC---------------
T ss_pred HHHHHHHHHHHHhcC-CCHH-HhhcccCCCCCCCHHHHHHHHccc--cEEccCC-----c-CCCC---------------
Confidence 445555566666663 4432 222346888899999999999998 9999763 2 4432
Q ss_pred CCCCcEEEEEEEEcCeeEEEEEEcCc--------ccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhH
Q psy5220 107 NETDALIVIKGSIMNLPLVVAVFEFE--------FMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSL 178 (286)
Q Consensus 107 ~~~~~vvtG~g~i~G~~v~v~a~d~~--------~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l 178 (286)
+++||||+|+|+|++|+|+++|+. +++|++++++++|++|++++|.++++|||+|+||+|++++++....
T Consensus 118 --d~avV~G~ari~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~lPlI~lvDt~Ga~~g~~aE~~ 195 (339)
T 2f9y_A 118 --DKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEER 195 (339)
T ss_dssp --CTTEEEEEEEETTEEEEEEEECCCSSTTHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCSHHHHHT
T ss_pred --CCcEEEEEEEECCEEEEEEEEeCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCccchHHHHH
Confidence 589999999999999999999998 4999999999999999999999999999999999999998877666
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhhhhhhhhccCCC-------CCCC
Q psy5220 179 MQMAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRVIKNTVKEKLPD-------GFQS 251 (286)
Q Consensus 179 ~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~vi~~~~g~~l~~-------~~~~ 251 (286)
+++..+...+.++++.++|+|++|+|+|+|||+++++ +||+++|+|+|++++++|++...++...... .+.+
T Consensus 196 g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~-~~D~via~p~A~~~v~~Peg~asil~~~~~~~~~Aae~~~it 274 (339)
T 2f9y_A 196 GQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIG-VGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGII 274 (339)
T ss_dssp THHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHHTTC-CCSEEEECTTCEEESSCHHHHHHHHSSCSTTHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCCcCcHHHHHHh-ccCeeeecCCCEEEeeccchHHHHHHHhhccHHHHHHHcCCC
Confidence 6777777788889999999999999999999987766 5999999999999999999977766444321 5689
Q ss_pred HHHHHHcCccceEeCch-------------hHHHHHHHHHHHHhc
Q psy5220 252 SEFLLKKGALDMIIDRR-------------KLRFKIANLLALLQK 283 (286)
Q Consensus 252 A~~~~~~G~vD~Vv~~~-------------e~~~~l~~~L~~l~~ 283 (286)
|+.++++|+||.||+.. ++++.|.+.|+.|.+
T Consensus 275 A~~a~~~GlVd~VV~ep~gga~~~~~~~~~~lr~~l~~~L~~l~~ 319 (339)
T 2f9y_A 275 RPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDV 319 (339)
T ss_dssp HHHHHTTTSCSCCCCCSTTCGGGCHHHHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHcCCeeEEecCCCCCCccCHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999842 788888888776654
No 14
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-37 Score=287.70 Aligned_cols=229 Identities=15% Similarity=0.112 Sum_probs=188.8
Q ss_pred hhhcccccccccchhhccccccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNT 106 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~ 106 (286)
+..++-..-+.+|. .|.....+ .-++|+.++++|+||+.|||+ |.|+.. |+ .|.|
T Consensus 49 ~e~~~~~~~~~~~~-~l~~~~~~-~~~~~~~r~~~re~I~~l~D~--f~El~~-----d~-~~~~--------------- 103 (327)
T 2f9i_A 49 LEASLERETKKIYT-NLKPWDRV-QIARLQERPTTLDYIPYIFDS--FMELHG-----DR-NFRD--------------- 103 (327)
T ss_dssp HHHHHHHHHHHHHH-SCCHHHHH-HHHTBTTSCCHHHHHHHHCEE--EEECCC-----CS-SSCC---------------
T ss_pred HHHHHHHHHHHHHh-cCChhhcc-cccCCCCCCCHHHHHHHhccc--eEEecC-----CC-CcCc---------------
Confidence 34455444555555 33322222 335788899999999999998 999976 33 4432
Q ss_pred CCCCcEEEEEEEEcCeeEEEEEEcCcc--------cccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhH
Q psy5220 107 NETDALIVIKGSIMNLPLVVAVFEFEF--------MGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSL 178 (286)
Q Consensus 107 ~~~~~vvtG~g~i~G~~v~v~a~d~~~--------~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l 178 (286)
++++|||+|+|+|++|+|+++|+.+ ++|++++++++|++|++++|.++++|||+|+||+|++++++....
T Consensus 104 --d~~vV~G~gri~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~~PlI~lvdt~Ga~~g~~ae~~ 181 (327)
T 2f9i_A 104 --DPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEER 181 (327)
T ss_dssp --CTTEEEEEEEETTEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCCHHHHHT
T ss_pred --ccceEEEEEEECCEEEEEEEEcCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCCcchhhhhh
Confidence 5899999999999999999999998 999999999999999999999999999999999999998876666
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhhhhhhhhccCCC-------CCCC
Q psy5220 179 MQMAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRVIKNTVKEKLPD-------GFQS 251 (286)
Q Consensus 179 ~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~vi~~~~g~~l~~-------~~~~ 251 (286)
+++..+...+.++++.++|+|++|+|+|+|||+++++ +||+++|||+|++++++|+....++-..... ...+
T Consensus 182 g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~-~~D~via~~~A~~~v~~peg~a~il~~~~~~a~~A~e~~~it 260 (327)
T 2f9i_A 182 GQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIG-IANKVLMLENSTYSVISPEGAAALLWKDSNLAKIAAETMKIT 260 (327)
T ss_dssp THHHHHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTC-CCSEEEEETTCBCBSSCHHHHHHHHSSCGGGHHHHHHHHTCB
T ss_pred hhHHHHHHHHHHHHhCCCCEEEEEECCcChHHHHHHH-CCCEEEEcCCceEeecCchHHHHHHHHHhcchHHHHHHcCCC
Confidence 6677777778888999999999999999999987665 5999999999999999999877665443221 5689
Q ss_pred HHHHHHcCccceEeCc---------h----hHHHHHHHHHHHHhc
Q psy5220 252 SEFLLKKGALDMIIDR---------R----KLRFKIANLLALLQK 283 (286)
Q Consensus 252 A~~~~~~G~vD~Vv~~---------~----e~~~~l~~~L~~l~~ 283 (286)
|+.+++.|+||.||+. + ++++.|.+.|+.|.+
T Consensus 261 A~~a~~~GlVd~VV~ep~gga~~~~~~~~~~lr~~l~~~L~~l~~ 305 (327)
T 2f9i_A 261 AHDIKQLGIIDDVISEPLGGAHKDIEQQALAIKSAFVAQLDSLES 305 (327)
T ss_dssp HHHHHHTTSSSEEECCCTTCGGGCHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHcCCceEEecCCCCCCccCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999994 2 788999888887754
No 15
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=100.00 E-value=9.2e-36 Score=290.78 Aligned_cols=212 Identities=15% Similarity=0.190 Sum_probs=175.0
Q ss_pred ccccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeE
Q psy5220 45 FNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPL 124 (286)
Q Consensus 45 ~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v 124 (286)
....++|. +.+.++++|++|+.|+|+|+|.|+..+ ++.++|||+|+|+|++|
T Consensus 283 ~l~~ivp~-~~~~~yd~r~~I~~l~D~~~f~E~~~~---------------------------~~~~iV~G~arl~G~~V 334 (530)
T 3iav_A 283 ELDTIVPD-SANQPYDMHSVIEHVLDDAEFFETQPL---------------------------FAPNILTGFGRVEGRPV 334 (530)
T ss_dssp HGGGSSCS-STTCCCCHHHHHHTTSGGGCCEEESTT---------------------------SCTTEEEEEEEETTEEE
T ss_pred hHHHhccC-CCCCCCCHHHHHHHHcCCcceeeeccc---------------------------cCceEEEEEEEECCEEE
Confidence 34678885 666799999999999999999999863 37899999999999999
Q ss_pred EEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcC
Q psy5220 125 VVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTN 204 (286)
Q Consensus 125 ~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g 204 (286)
+|++||+.+++|++++++++|.+||+++|+++++|||+|+|++|+.+...........+..+.+..+++++||+|+||+|
T Consensus 335 gvian~~~~~~G~l~~~~a~Kaarfi~~c~~~~iPlv~lvDtpGf~~G~~~E~~gi~~~~Ak~l~a~a~a~vP~itvI~g 414 (530)
T 3iav_A 335 GIVANQPMQFAGCLDITASEKAARFVRTCDAFNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITR 414 (530)
T ss_dssp EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEE
T ss_pred EEEEecCcccCCCCCHHHHHHHHHHHHHHHhcCCCEEEEeeCCCCCccHHHHHhhHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999988321111111233444466677889999999999
Q ss_pred Ccchhhhhhcc---ccccEEEEcCCcEEEeeChhhhhhhhhc-cCCC------------------CCCCHHHHHHcCccc
Q psy5220 205 PTMGGVSASFA---FMGDIVIAEPGALIGFAGPRVIKNTVKE-KLPD------------------GFQSSEFLLKKGALD 262 (286)
Q Consensus 205 ~~~GGg~~s~a---~~~d~via~~~A~i~~~gp~vi~~~~g~-~l~~------------------~~~~A~~~~~~G~vD 262 (286)
.+|||+++.++ +.+|+++|||+|+++++||+....++.. ++.+ ++.++.+++++|+||
T Consensus 415 ~~~GGa~~am~~~~~~~d~~~awp~a~~~Vm~~egaa~il~r~~~~~~~~d~~~~~~~~~~~y~~~~~~p~~aa~~~~vD 494 (530)
T 3iav_A 415 KAFGGAYVVMGSKHLGADLNLAWPTAQIAVMGAQGAVNILHRRTIADAGDDAEATRARLIQEYEDALLNPYTAAERGYVD 494 (530)
T ss_dssp EEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTSTTTSTTCTTCHHHHHHHHHHHHHHHSSSHHHHHTTSSS
T ss_pred CcchHHHHHhcCCCCCCCEEEEcCCceEecCCHHHHHHHHhhhhhhhcccCHHHHHHHHHHHHHHhcCCHHHHHhcCCCC
Confidence 99999876554 2479999999999999999986665432 2211 124667778899999
Q ss_pred eEeCchhHHHHHHHHHHHHhcC
Q psy5220 263 MIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 263 ~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.||+|.|+|..|.+.|+.+.++
T Consensus 495 ~VIdP~~TR~~l~~~l~~~~~k 516 (530)
T 3iav_A 495 AVIMPSDTRRHIVRGLRQLRTK 516 (530)
T ss_dssp EECCGGGHHHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998764
No 16
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=100.00 E-value=2.2e-35 Score=287.97 Aligned_cols=209 Identities=18% Similarity=0.223 Sum_probs=174.8
Q ss_pred ccccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeE
Q psy5220 45 FNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPL 124 (286)
Q Consensus 45 ~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v 124 (286)
....++|. +.+.++++|++|+.|+|+|+|.|+..+ ++.++|||+|+|+|++|
T Consensus 289 ~l~~ivp~-~~~~pyd~r~vI~~l~D~~~f~E~~~~---------------------------~~~~iV~G~arl~G~~V 340 (531)
T 3n6r_B 289 SLDTLVPD-NPNTPYDMKELIHKLADEGDFYEIQEE---------------------------FAKNIITGFIRLEGRTV 340 (531)
T ss_dssp GGGGTSCS-STTCCCCHHHHHHHHSTTSCCEEESTT---------------------------SSTTEEEEEEEETTEEE
T ss_pred HHHhhCCC-CcCCCcCHHHHHHhccCCcceEEeccc---------------------------CCCcEEEEEEEECCEEE
Confidence 34577884 666789999999999999999999872 37899999999999999
Q ss_pred EEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch---hhchHhHHHHHHHHHHHHHHhcCCCCEEEE
Q psy5220 125 VVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM---QEGLLSLMQMAKTTAILTKLSKKKIPFISV 201 (286)
Q Consensus 125 ~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i---~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isv 201 (286)
+|++||+.+++|++++++++|.+||+++|+++++|||+|+|++|+.+ +|...-....+++ +.++++++||+|+|
T Consensus 341 gvian~~~~~~G~l~~~~a~Kaarfi~lcd~~~iPlv~lvDtpGf~~G~~~E~~Gi~~~gAk~---l~a~a~a~VP~itv 417 (531)
T 3n6r_B 341 GVVANQPLVLAGCLDIDSSRKAARFVRFCDAFEIPLLTLIDVPGFLPGTSQEYGGVIKHGAKL---LYAYGEATVPMVTV 417 (531)
T ss_dssp EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCSHHHHHTTHHHHHHHH---HHHHHHCCSCEEEE
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHHHhhccCCCEEEEeCCCCCCCCHHHHHhhHHHHHHHH---HHHHHhCCCCEEEE
Confidence 99999999999999999999999999999999999999999999987 3322212334444 55667789999999
Q ss_pred EcCCcchhhhhhcc---ccccEEEEcCCcEEEeeChhhhhhhhh-ccCCC-------------CCCCHHHHHHcCccceE
Q psy5220 202 LTNPTMGGVSASFA---FMGDIVIAEPGALIGFAGPRVIKNTVK-EKLPD-------------GFQSSEFLLKKGALDMI 264 (286)
Q Consensus 202 v~g~~~GGg~~s~a---~~~d~via~~~A~i~~~gp~vi~~~~g-~~l~~-------------~~~~A~~~~~~G~vD~V 264 (286)
|+|.+||||++.++ +.+|+++|||+|+++++||+....++- .++.+ .+.++.+++++|+||.|
T Consensus 418 I~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~Vm~pegaa~Il~r~~~~~~~~~~~~~~~y~~~~~~p~~aa~~~~vD~v 497 (531)
T 3n6r_B 418 ITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMGAKGATEIIHRGDLGDPEKIAQHTADYEERFANPFVASERGFVDEV 497 (531)
T ss_dssp EEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHHHHHHHHCCTTTTSTTHHHHHHHHHHHHHSSSHHHHHHTSSSEE
T ss_pred EcCCccchhhhhccCccCCCCeEEEcCCceEecCCHHHHHHHHhcccccchhHHHHHHHHHHHHhcCHHHHHhcCccCcc
Confidence 99999999986554 348999999999999999998666543 22321 13566677789999999
Q ss_pred eCchhHHHHHHHHHHHHhcC
Q psy5220 265 IDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 265 v~~~e~~~~l~~~L~~l~~~ 284 (286)
|+|+|+|+.|.+.|+.+.++
T Consensus 498 IdP~~TR~~l~~~l~~~~~k 517 (531)
T 3n6r_B 498 IQPRSTRKRVARAFASLRNK 517 (531)
T ss_dssp CCGGGHHHHHHHHHHTTTTC
T ss_pred cCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999988654
No 17
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=2.2e-35 Score=288.77 Aligned_cols=208 Identities=20% Similarity=0.247 Sum_probs=175.4
Q ss_pred ccccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeE
Q psy5220 45 FNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPL 124 (286)
Q Consensus 45 ~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v 124 (286)
....++|. +...++++|++|+.|+|+|||.|+..+ +++++|||+|+|+|++|
T Consensus 281 ~l~~~vp~-~~~~pyd~r~~I~~l~D~g~f~E~~~~---------------------------~~~~vV~G~ari~G~~V 332 (527)
T 1vrg_A 281 DILDILPD-NPNKGYDVRDVIKRVVDHGEFFEVQPY---------------------------FAKNIVIGFARIQGKTV 332 (527)
T ss_dssp GGGGSSCS-STTSCCCTHHHHHHHSGGGCCEEESTT---------------------------SSTTEEEEEEEETTEEE
T ss_pred HHhhhccC-CCCCCcCHHHHHHHhcCCCeEEEecCC---------------------------CcCcEEEEEEEECCEEE
Confidence 34567774 566789999999999999999999873 37899999999999999
Q ss_pred EEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch---hhchHhHHHHHHHHHHHHHHhcCCCCEEEE
Q psy5220 125 VVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM---QEGLLSLMQMAKTTAILTKLSKKKIPFISV 201 (286)
Q Consensus 125 ~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i---~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isv 201 (286)
+|+++|+++++|++++++++|++|++++|+++++|||+|+|++|+++ +|.......++++ +..+++++||+|++
T Consensus 333 ~via~~~~~~~G~~~~~~~~Kaar~i~~a~~~~~Plv~lvDtpG~~~G~~~E~~g~~~~~A~~---~~a~~~~~vP~isv 409 (527)
T 1vrg_A 333 GIVANQPSVLAGVLDIDSSDKAARFIRFLDAFNIPILTFVDTPGYLPGVAQEHGGIIRHGAKL---LYAYSEATVPKITV 409 (527)
T ss_dssp EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHH---HHHHHHCCSCEEEE
T ss_pred EEEEEcCcccCCCCCHHHHHHHHHHHHHHhhcCCCeEEEecCCCCcCchhhHHhHHHHHHHHH---HHHHhcCCCCEEEE
Confidence 99999999999999999999999999999999999999999999998 4543333445555 45566789999999
Q ss_pred EcCCcchhhhhhcc---ccccEEEEcCCcEEEeeChhhhhhhhhcc--------------CC----CCCCCHHHHHHcCc
Q psy5220 202 LTNPTMGGVSASFA---FMGDIVIAEPGALIGFAGPRVIKNTVKEK--------------LP----DGFQSSEFLLKKGA 260 (286)
Q Consensus 202 v~g~~~GGg~~s~a---~~~d~via~~~A~i~~~gp~vi~~~~g~~--------------l~----~~~~~A~~~~~~G~ 260 (286)
|+|+++||+++.++ +.+|+++|||+|+++++||+....++..+ +. +.+.++.++++.|+
T Consensus 410 I~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~~~~g~ 489 (527)
T 1vrg_A 410 ILRKAYGGAYIAMGSKHLGADMVLAWPSAEIAVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAASRGY 489 (527)
T ss_dssp EEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHTSSHHHHHHTTS
T ss_pred EeCCcccHHHHHhcCCCCCCCEEEEcCCCeEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHHHcCC
Confidence 99999999987664 34899999999999999999865544221 11 11456778889999
Q ss_pred cceEeCchhHHHHHHHHHHHHhc
Q psy5220 261 LDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 261 vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
||.||+|+++|+.|.+.|+.+.+
T Consensus 490 iD~II~p~~tR~~l~~~L~~l~~ 512 (527)
T 1vrg_A 490 VDMVIDPRETRKYIMRALEVCET 512 (527)
T ss_dssp SSEECCGGGHHHHHHHHHHHHTT
T ss_pred CCeeeCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999864
No 18
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=100.00 E-value=1.1e-34 Score=283.64 Aligned_cols=210 Identities=18% Similarity=0.199 Sum_probs=173.7
Q ss_pred cccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEE
Q psy5220 46 NQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLV 125 (286)
Q Consensus 46 ~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~ 125 (286)
...++|. +...++++|++|+.|+|+|||+|+..+ ++.++|||+|+|+|++|+
T Consensus 278 l~~~vp~-~~~~~~d~r~~I~~l~D~g~f~E~~~~---------------------------~~~~iv~G~ari~G~~Vg 329 (523)
T 1on3_A 278 LRDIVPI-DGKKGYDVRDVIAKIVDWGDYLEVKAG---------------------------YATNLVTAFARVNGRSVG 329 (523)
T ss_dssp GGGTSCS-STTCCCCTHHHHHHHSGGGCEEEESTT---------------------------SSTTEEEEEEEETTEEEE
T ss_pred hhhhcCC-CCCCCCCHHHHHHHhCCCCeEEEecCC---------------------------CcCcEEEEEEEECCEEEE
Confidence 4567774 666799999999999999999999762 378999999999999999
Q ss_pred EEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCC
Q psy5220 126 VAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNP 205 (286)
Q Consensus 126 v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~ 205 (286)
|++||+++++|++++++++|++||+++|+++++|||+|+|++|+.+........+...+.+.+..+++++||+|+||+|+
T Consensus 330 vian~~~~~~G~~~~~~a~Kaar~i~~~~~~~iPlv~lvDtpGf~~G~~~E~~Gi~~~~A~~l~a~a~~~vP~itvI~g~ 409 (523)
T 1on3_A 330 IVANQPSVMSGCLDINASDKAAEFVNFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRK 409 (523)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEE
T ss_pred EEEecCCccCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCCCcCcchHHHHhhHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999882211111112334445666778899999999999
Q ss_pred cchhhhhhccc---cccEEEEcCCcEEEeeChhhhhhhhhcc--------------CC----CCCCCHHHHHHcCccceE
Q psy5220 206 TMGGVSASFAF---MGDIVIAEPGALIGFAGPRVIKNTVKEK--------------LP----DGFQSSEFLLKKGALDMI 264 (286)
Q Consensus 206 ~~GGg~~s~a~---~~d~via~~~A~i~~~gp~vi~~~~g~~--------------l~----~~~~~A~~~~~~G~vD~V 264 (286)
++|||+++++. .+|+++|||+|+++++||+....++..+ +. +.+.++.++++.|+||.|
T Consensus 410 ~~Ggg~~am~~~~~~~d~~~a~p~a~~~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~I 489 (523)
T 1on3_A 410 AYGGSYLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDV 489 (523)
T ss_dssp EEHHHHHTTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEE
T ss_pred cccHHHHHhcccCCCCCEEEEcCCCeEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHHhcCCCCEe
Confidence 99999877753 4899999999999999999865543221 11 113566778899999999
Q ss_pred eCchhHHHHHHHHHHHHhc
Q psy5220 265 IDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 265 v~~~e~~~~l~~~L~~l~~ 283 (286)
|+++++|+.|.+.|+.+.+
T Consensus 490 I~p~~tR~~l~~~L~~l~~ 508 (523)
T 1on3_A 490 IDPADTRRKIASALEMYAT 508 (523)
T ss_dssp CCGGGHHHHHHHHHHHGGG
T ss_pred eCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999864
No 19
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=100.00 E-value=2.4e-34 Score=282.26 Aligned_cols=209 Identities=18% Similarity=0.209 Sum_probs=171.1
Q ss_pred cccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEE
Q psy5220 46 NQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLV 125 (286)
Q Consensus 46 ~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~ 125 (286)
...++|. +.+.++++|++|+.|+|++ |.|+..+ +++++|||+|+|+|++|+
T Consensus 300 l~~~vp~-~~~~pyd~r~~I~~l~D~~-f~E~~~~---------------------------~~~~vV~G~ari~G~~Vg 350 (548)
T 2bzr_A 300 LDTLIPD-SPNQPYDMHEVITRLLDDE-FLEIQAG---------------------------YAQNIVVGFGRIDGRPVG 350 (548)
T ss_dssp GGGTSCS-STTCCCCTHHHHHHHSSSC-CEEESTT---------------------------SSTTEEEEEEEETTEEEE
T ss_pred HhhhCCC-CCCCCCCHHHHHHHHcCCC-eEEeccc---------------------------cCccEEEEEEEECCEEEE
Confidence 4677884 6667899999999999998 9999872 378999999999999999
Q ss_pred EEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCC
Q psy5220 126 VAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNP 205 (286)
Q Consensus 126 v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~ 205 (286)
|++||+++++|++++++++|++|++++|+++++|||+|+|++|+.+........+.......+..++++.||+|+||+|+
T Consensus 351 vian~~~~~~G~l~~~~a~Kaar~i~~a~~~~iPlv~lvDt~Gf~~G~~~E~~Gi~~~ga~~l~a~~~~~VP~isvI~g~ 430 (548)
T 2bzr_A 351 IVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVPKITVITRK 430 (548)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEE
T ss_pred EEEECCcccCCCCCHHHHHHHHHHHHHHHhcCCCEEEEeeccCCCCChHHHHhhHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999882211111112333445666777899999999999
Q ss_pred cchhhhhhcc---ccccEEEEcCCcEEEeeChhhhhhhhhcc-CCC------C---------------CCCHHHHHHcCc
Q psy5220 206 TMGGVSASFA---FMGDIVIAEPGALIGFAGPRVIKNTVKEK-LPD------G---------------FQSSEFLLKKGA 260 (286)
Q Consensus 206 ~~GGg~~s~a---~~~d~via~~~A~i~~~gp~vi~~~~g~~-l~~------~---------------~~~A~~~~~~G~ 260 (286)
++|||++.++ +.+|+++|||+|+++++||+....++..+ +.. + +.++.+++++|+
T Consensus 431 ~~Ggg~~am~~~~~~~d~~~awp~a~i~Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~y~~~~~~p~~~a~~g~ 510 (548)
T 2bzr_A 431 AYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDTLVNPYVAAERGY 510 (548)
T ss_dssp EEHHHHHHTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTCCC----------CHHHHHHHHHHHHHHHSBSHHHHHTTS
T ss_pred cchHHHHHhccccCCCCEEEEcCCCEEEecCHHHHHHHHhhhHHhhhhcccccHHHHHHHHHHHHHHhhCCHHHHHhcCC
Confidence 9999987664 34899999999999999999866654332 110 1 234456778999
Q ss_pred cceEeCchhHHHHHHHHHHHHhc
Q psy5220 261 LDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 261 vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
||.||+|+++|+.|.+.|+.+.+
T Consensus 511 iD~II~p~~tR~~l~~~L~~l~~ 533 (548)
T 2bzr_A 511 VGAVIPPSHTRGYIGTALRLLER 533 (548)
T ss_dssp SSEECCGGGHHHHHHHHHHHTTT
T ss_pred CceeeCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998754
No 20
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=100.00 E-value=6.5e-34 Score=278.57 Aligned_cols=203 Identities=16% Similarity=0.189 Sum_probs=168.2
Q ss_pred ccccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeE
Q psy5220 45 FNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPL 124 (286)
Q Consensus 45 ~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v 124 (286)
....++|. +.+.++++|+.|+.|+|+++|.|+... +++++|||+|+|+|++|
T Consensus 308 ~l~~ivP~-~~~~pyd~r~~i~~i~D~~~f~E~~~~---------------------------~g~~iV~G~ari~G~~V 359 (555)
T 3u9r_B 308 ELYGVIPA-DSKQPYDVREVIARLVDGSEFDEFKAL---------------------------FGTTLVCGFAHLHGYPI 359 (555)
T ss_dssp GHHHHSCS-STTSCCCTHHHHTTTSGGGBCEEESTT---------------------------SSTTEEEEEEEETTEEE
T ss_pred HHHhhCCC-CccCCccHHHHHhhhcCCceeEEeecc---------------------------CCCcEEEEEEEECCEEE
Confidence 34567784 566789999999999999999999862 37899999999999999
Q ss_pred EEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch---hh--chHhHHHHHHHHHHHHHHhcCCCCEE
Q psy5220 125 VVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM---QE--GLLSLMQMAKTTAILTKLSKKKIPFI 199 (286)
Q Consensus 125 ~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i---~E--g~~~l~~~~~~~~a~~~l~~~~vP~I 199 (286)
+|++|+ |++++++++|.+||+++|+++++|||+|+|++|+.+ +| |+. ..++++ +.++++++||+|
T Consensus 360 gvian~-----G~l~~~~a~Kaarfi~~c~~~~iPlv~lvDtpGf~~G~~~E~~Gi~--~~gAk~---~~a~~~a~vP~i 429 (555)
T 3u9r_B 360 AILANN-----GILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIA--KHGAKL---VTAVACARVPKF 429 (555)
T ss_dssp EEEEEC-----SSBCHHHHHHHHHHHHHHHHHTCCEEEEEEECCBCCSHHHHHTTHH--HHHHHH---HHHHHHCCSCEE
T ss_pred EEEEeC-----CccCHHHHHHHHHHHHHHhcCCCCEEEEecCcCCCCCHHHHHHHHH--HHHHHH---HHHHHhCCCCEE
Confidence 999998 999999999999999999999999999999999987 33 333 344555 456677899999
Q ss_pred EEEcCCcchhhhhhcc---ccccEEEEcCCcEEEeeChhhhhhhhh-----------ccCC---------------CCCC
Q psy5220 200 SVLTNPTMGGVSASFA---FMGDIVIAEPGALIGFAGPRVIKNTVK-----------EKLP---------------DGFQ 250 (286)
Q Consensus 200 svv~g~~~GGg~~s~a---~~~d~via~~~A~i~~~gp~vi~~~~g-----------~~l~---------------~~~~ 250 (286)
+||+|++|||++++++ +.+|+++|||+|+++++||+....++. ++++ ++..
T Consensus 430 tvi~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~Vmgpegaa~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~ 509 (555)
T 3u9r_B 430 TVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQAAGVLAQVKREQAERAGQQLGVEEEAKIKAPILEQYEHQG 509 (555)
T ss_dssp EEEEEEEETTHHHHTTCGGGCCSEEEECTTCEEESSCHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCccchhhHhhcCccCCCCeEEEcCCcEEEcCCHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHhC
Confidence 9999999999976543 347999999999999999998555421 1111 1124
Q ss_pred CHHHHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 251 SSEFLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 251 ~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
++.+++++|+||.||+|.|+|..|...|+.+.+++
T Consensus 510 ~p~~aa~r~~vD~vIdP~~TR~~l~~~l~~~~~~~ 544 (555)
T 3u9r_B 510 HPYYSSARLWDDGVIDPAQTREVLALALSAALNAP 544 (555)
T ss_dssp SHHHHHHTTSSSCBCCGGGHHHHHHHHHHHHTTSC
T ss_pred CHHHHhhccccCcccChHHHHHHHHHHHHHHhcCC
Confidence 56677789999999999999999999999987754
No 21
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=100.00 E-value=6.8e-33 Score=272.91 Aligned_cols=210 Identities=12% Similarity=0.115 Sum_probs=169.1
Q ss_pred ccccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeE
Q psy5220 45 FNQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPL 124 (286)
Q Consensus 45 ~~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v 124 (286)
....++|. +.+.++++|+.|+.|+|+|+|.|+... ++.++|||+|+|+|++|
T Consensus 311 ~L~~ivP~-~~~~pyD~r~vI~~i~D~~~f~E~~~~---------------------------~g~~iV~G~arl~G~pV 362 (588)
T 3gf3_A 311 DLYSIIPM-NQKRPYDIYEVIARLFDNSEFSEYKKG---------------------------YGPEMVTGLAKVNGLLV 362 (588)
T ss_dssp GHHHHSCS-STTCCCCHHHHHHHHSGGGBCEESSTT---------------------------SSTTEEEEEEEETTEEE
T ss_pred HHHhhCCC-CCCCCCCHHHHHHHHcCCCcceeeccc---------------------------ccccEEEEEEEECCEEE
Confidence 34677885 666789999999999999999999872 37899999999999999
Q ss_pred EEEEEcCcc-------------cccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch---hhchHhHHHHHHHHHHH
Q psy5220 125 VVAVFEFEF-------------MGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM---QEGLLSLMQMAKTTAIL 188 (286)
Q Consensus 125 ~v~a~d~~~-------------~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i---~Eg~~~l~~~~~~~~a~ 188 (286)
+|++|+..+ ++|.+++++++|.+||+++|+++++|||+|+|++|+.. +|...-....+++ +
T Consensus 363 gvvan~~~~~~~~p~~~~~~~~~~G~l~~~~a~Kaarfi~lcd~f~iPlv~lvDtpGf~~G~~aE~~Gi~~~gAk~---l 439 (588)
T 3gf3_A 363 GVIANVQGLLMNYPEYKQNSVGIGGKLYRQGLIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELLGLGQSL---I 439 (588)
T ss_dssp EEEEECCSEEETCCTTSSSCEEETTEECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHHHHHHH---H
T ss_pred EEEEecCCcccccccchhhhhccCCCcCHHHHHHHHHHHHHhhhcCCCeEEEecCCCCCCCHHHHHHHHHHHHHHH---H
Confidence 999999755 47999999999999999999999999999999999987 3311112334555 4
Q ss_pred HHHhcCCCCEEEEEcCCcchhhhhhccc---cc--cEEEEcCCcEEEeeChhhhhhhhhc-c----------CC------
Q psy5220 189 TKLSKKKIPFISVLTNPTMGGVSASFAF---MG--DIVIAEPGALIGFAGPRVIKNTVKE-K----------LP------ 246 (286)
Q Consensus 189 ~~l~~~~vP~Isvv~g~~~GGg~~s~a~---~~--d~via~~~A~i~~~gp~vi~~~~g~-~----------l~------ 246 (286)
.++++++||+|+||+|.+||||++.++. .+ |+++|||+|+++++||+....++-. + ++
T Consensus 440 ~a~a~a~VP~itvI~g~~~Ggg~~am~~~~~~~~~~~~~awp~A~~sVm~pEgaa~Il~~~~~~~~~~~~~~~~~~~~~~ 519 (588)
T 3gf3_A 440 YSIENSKLPSLEITIRKASAAAHYVLGGPQGNNTNVFSIGTGACEYYVMPGETAANAMYSRKLVKAKKAGEDLQPIIGKM 519 (588)
T ss_dssp HHHHHHCSCEEEEESSEEETTHHHHTTCTTCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHC-------CHHHHHH
T ss_pred HHHHhCCCCEEEEEcCCccHHHHHHhcccccCCccceEEECCCceEEeCCHHHHHHHHhhhHHhhhhccccccchHHHHH
Confidence 5566679999999999999999764432 22 3999999999999999874443211 0 00
Q ss_pred -------CCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 247 -------DGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 247 -------~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
++..++.+++++|+||.||+|+|||..|..+|+...+.|
T Consensus 520 ~~~~~~y~~~~~p~~aA~r~~vD~VIdP~~TR~~l~~~~~~~~~~p 565 (588)
T 3gf3_A 520 NDMIQMYTDKSRPKYCTEKGMVDEIVDMTEVRPYIQAFTEAAYQNP 565 (588)
T ss_dssp HHHHHHHHHTTSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhCCHHHHHhcCCCCeeeCHHHHHHHHHHHHHHHHcCC
Confidence 112467777899999999999999999999999877654
No 22
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=6.5e-33 Score=273.75 Aligned_cols=209 Identities=12% Similarity=0.134 Sum_probs=170.7
Q ss_pred cccccccccCCCCCCHHHHHHhhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEEEEcCeeEE
Q psy5220 46 NQQVCTKCDYHMQIKARDRLNNFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKGSIMNLPLV 125 (286)
Q Consensus 46 ~~~vc~~~~~~~~~~ar~ri~~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g~i~G~~v~ 125 (286)
...++|. +...++++|+.|+.|+|+|+|+|+... ++.++|||+|+|+|++|+
T Consensus 309 l~~ivp~-~~~~pyd~r~vI~~l~D~~~f~E~~~~---------------------------~~~~iV~G~arl~G~~Vg 360 (587)
T 1pix_A 309 LYSMVPL-NDKRAYDIYNVIARLFDNSELHEYKKG---------------------------YGPEMVTGLAKVNGLLVG 360 (587)
T ss_dssp HHHHSCS-STTSCCCHHHHHHTTSGGGBCEESSTT---------------------------SSTTEEEEEEEETTEEEE
T ss_pred HhhhCCC-CCCCCccHHHHHHHhCCCceEEEeccc---------------------------cCCcEEEEEEEECCEEEE
Confidence 3567774 555678999999999999999999872 378999999999999999
Q ss_pred EEEEc-------Ccc-------cccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch---hhchHhHHHHHHHHHHH
Q psy5220 126 VAVFE-------FEF-------MGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM---QEGLLSLMQMAKTTAIL 188 (286)
Q Consensus 126 v~a~d-------~~~-------~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i---~Eg~~~l~~~~~~~~a~ 188 (286)
|++|+ +.+ .+|.+++++++|.+||+++|+++++|||+|+|++|+.+ +|... +...+.+.+
T Consensus 361 vIan~~g~~~~~P~~~~~~~~~~~G~l~~~~a~Kaarfi~~c~~~~iPlv~lvDtpGf~~G~~~E~~G---i~~~gA~~~ 437 (587)
T 1pix_A 361 VVANVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAE---LLGLGQSLI 437 (587)
T ss_dssp EEEECCSEETTCCTTSCTTCCEETTEECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTT---HHHHHHHHH
T ss_pred EEEeccCccccccccccccccccCCCcCHHHHHHHHHHHHHhhcCCCCeEEEecCCCCCCcHHHHHHH---HHHHHHHHH
Confidence 99996 333 78999999999999999999999999999999999987 33111 123334456
Q ss_pred HHHhcCCCCEEEEEcCCcchhhhhhcc---ccc--cEEEEcCCcEEEeeChhhhhhhhhc-c------------------
Q psy5220 189 TKLSKKKIPFISVLTNPTMGGVSASFA---FMG--DIVIAEPGALIGFAGPRVIKNTVKE-K------------------ 244 (286)
Q Consensus 189 ~~l~~~~vP~Isvv~g~~~GGg~~s~a---~~~--d~via~~~A~i~~~gp~vi~~~~g~-~------------------ 244 (286)
.++++++||+|+||+|.+||||++.++ +.+ |+++|||+|+++++||+....++.. +
T Consensus 438 ~a~a~a~vP~itvI~g~~~Ggg~~am~~~~~~~~~d~~~a~p~A~~~Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~ 517 (587)
T 1pix_A 438 YSIQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKM 517 (587)
T ss_dssp HHHHTCCCCEEEEECSEEETTHHHHTTCTTCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHhCCCCEEEEEcCCCccHHHHHhcCcccCcccceeeeccCCeEecCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHH
Confidence 677888999999999999999986543 225 9999999999999999975444321 0
Q ss_pred --CC---CCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 245 --LP---DGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 245 --l~---~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
+. ++..++.++++.|+||.||+|+++|+.|.+.|+.+.+.|
T Consensus 518 ~~~~~~y~~~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~ 563 (587)
T 1pix_A 518 NNLIQAFYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNP 563 (587)
T ss_dssp HHHHHHHHHTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCC
Confidence 00 123678888899999999999999999999999998765
No 23
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=99.98 E-value=1.5e-33 Score=283.84 Aligned_cols=196 Identities=15% Similarity=0.212 Sum_probs=166.9
Q ss_pred HHHHHhhcCC-CceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEEE------EEcCeeEEEEEEcCccc
Q psy5220 62 RDRLNNFLDK-NNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIKG------SIMNLPLVVAVFEFEFM 134 (286)
Q Consensus 62 r~ri~~L~D~-gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~g------~i~G~~v~v~a~d~~~~ 134 (286)
.++++.|+|+ |||.|++.+..+ .+.++|+|.+ +++|++|+|+++|++|+
T Consensus 78 l~~~elllD~~gsf~E~~~~~~~------------------------~~~GmV~g~~~~~t~~~~~Gr~vvVianD~t~~ 133 (793)
T 2x24_A 78 LTYTELVLDPQGQLVEMNRLPGG------------------------NEVGMVAFKMTLKTLEYPEGRDIILISNDITFR 133 (793)
T ss_dssp EEEEEEEECTTSCEECCCCCTTC------------------------CSSSEEEEEEEECCSSCTTCEEEEEEEECSSGG
T ss_pred hhHHHHhcCCCCCEEEeCCccCC------------------------CCCCeeeeeecccCccccCCeEEEEEEECCccc
Confidence 3444589999 999999985431 2569999998 67999999999999999
Q ss_pred ccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch--hhchHhHHHH----------------------HHH------
Q psy5220 135 GGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM--QEGLLSLMQM----------------------AKT------ 184 (286)
Q Consensus 135 gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i--~Eg~~~l~~~----------------------~~~------ 184 (286)
+||+|+.+++|+.|++++|.+.++|+|+|+||||+|| +|++.+++|| +++
T Consensus 134 gGS~g~~~~~K~~ra~elA~~~glP~I~l~dsgGARig~~ee~~sl~qma~~d~~~p~~G~~~~yl~~~~~~~~sa~~~v 213 (793)
T 2x24_A 134 IGSFGPGEDLLYLRASELARAEGIPRVYLAANSGARIGLAEEIKHMFQVAWVDPEDPHKGIKYLYLTPQDYTRISSLNSV 213 (793)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCCCCCHHHHTTCEEEESSSSCSTTCEEEEEECHHHHHHTTTSCSE
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcCccchhhhhhhhcccccCccCcccchheeccchhHHHhhhccccc
Confidence 9999999999999999999999999999999999999 7777655433 221
Q ss_pred ------------------------------------HHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcE
Q psy5220 185 ------------------------------------TAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGAL 228 (286)
Q Consensus 185 ------------------------------------~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~ 228 (286)
+.+..+++ ..+|+|++|+|+|+|||++.. .++|++||.+++.
T Consensus 214 ~~~~~~~~ge~~~~i~~i~g~~~~i~v~~l~~SG~iag~~s~a~-~~iP~IsvV~G~~~GGgAy~~-~lgD~vI~~~~a~ 291 (793)
T 2x24_A 214 HCKHVEEDGESRYVITDIIGKEEGLGVENLRGSGMIAGETSQDY-DEIVTISMVSCRALGIGAYLV-RLGQRVIQVENSH 291 (793)
T ss_dssp EEEEEEETTEEEEEEEEECCSSSSSSTHHHHHHHHHHHHHHHHH-HHSCEEEEECSEEETHHHHHH-HHTCCEEEETTCE
T ss_pred cccccccccccceeeeccccccchHHHHHHHhccchhhcccccc-CCCCEEEEEecCCchHHHHHH-hhCCeEEEecccc
Confidence 11111111 369999999999999997654 4699999999999
Q ss_pred EEeeChhhhhhhhhccC--C-CCCCCHHHHHHcCccceEeCch-hHHHHHHHHHHHHhc
Q psy5220 229 IGFAGPRVIKNTVKEKL--P-DGFQSSEFLLKKGALDMIIDRR-KLRFKIANLLALLQK 283 (286)
Q Consensus 229 i~~~gp~vi~~~~g~~l--~-~~~~~A~~~~~~G~vD~Vv~~~-e~~~~l~~~L~~l~~ 283 (286)
|+++||++|++++|+++ + +++++++++..+|++|.+++++ +..+.++++|+++|.
T Consensus 292 i~ltGp~vi~~~~Ge~vy~s~e~LGGa~v~~~~Gv~d~vv~dd~ea~~~ir~~LsylP~ 350 (793)
T 2x24_A 292 IILTGATALNKVLGRDVYTSNNQLGGVQIMHHNGVSHVTVPDDFEGVCTILEWLSYMPK 350 (793)
T ss_dssp EESSCHHHHHHHHSSCCCSCHHHHHSHHHHTTTTSCSEEESSHHHHHHHHHHHHTTSCS
T ss_pred EEecCHHHHHHhcCCcccCChhhhccHHHHHhcCceEEEeCCHHHHHHHHHHHHHhccc
Confidence 99999999999999998 4 7899999988999999999986 999999999999985
No 24
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=99.97 E-value=6.7e-30 Score=255.33 Aligned_cols=175 Identities=17% Similarity=0.212 Sum_probs=151.4
Q ss_pred CCCCcEEEEEEEE------cCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcchhhchH--h-
Q psy5220 107 NETDALIVIKGSI------MNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARMQEGLL--S- 177 (286)
Q Consensus 107 ~~~~~vvtG~g~i------~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i~Eg~~--~- 177 (286)
..++++|+|.+++ +|++|+|+++|++|+|||+|+.+++|+.|++++|.+.++|+|+|+||||+||||+.. +
T Consensus 84 ~nd~gmV~g~~~l~t~e~i~G~~vvV~a~D~t~~gGS~G~~~~eKi~Ra~e~A~~~~lPvI~l~dSGGARmqe~~ev~~~ 163 (758)
T 3k8x_A 84 ANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPL 163 (758)
T ss_dssp CCSSSEEEEEEEECCSSCTTCEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCCCCCGGGTTT
T ss_pred CCCceEEEEEEEECCccccCCeEEEEEEECCccccccCcHHHHHHHHHHHHHHHHcCCCEEEEecCCCcCccccchhccc
Confidence 3578899999998 999999999999999999999999999999999999999999999999999986541 0
Q ss_pred -----------------H----HHHHHHH---------------------------------------------HHHHHH
Q psy5220 178 -----------------L----MQMAKTT---------------------------------------------AILTKL 191 (286)
Q Consensus 178 -----------------l----~~~~~~~---------------------------------------------~a~~~l 191 (286)
+ ..++++. .+..+.
T Consensus 164 ~~v~w~d~~~~~~G~~~ly~~q~~~~~ls~~g~~~~vi~~~~~~~ge~r~~I~~I~G~~~~~gv~~l~~sG~iag~~s~a 243 (758)
T 3k8x_A 164 FQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRA 243 (758)
T ss_dssp CEEEESSTTCGGGCEEEEEECHHHHHHHHHTTCGGGEEEEEEEETTEEEEEEEEECCSSSCSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhcccceeccCHHHHHHhhhccccccceeeeeccCCceeeeEeeeeccccchhhhhccccchhhhhhhhh
Confidence 0 1233332 111122
Q ss_pred hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhhhhhhhhccC--C-CCCCCHHHHHHcCccceEeCch
Q psy5220 192 SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRVIKNTVKEKL--P-DGFQSSEFLLKKGALDMIIDRR 268 (286)
Q Consensus 192 ~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~vi~~~~g~~l--~-~~~~~A~~~~~~G~vD~Vv~~~ 268 (286)
. ..+|+|++|+|+|+|||++..+| +|++||.+++.|+++||++|+.++|+++ + +++++|+.|..+|++|.+++++
T Consensus 244 ~-~~IPqIsvV~G~c~GGgAY~paL-~D~vImv~~s~ifltGP~vIk~~tGeeV~~s~eeLGGA~vh~~sGvad~va~dd 321 (758)
T 3k8x_A 244 Y-HDIFTITLVTCRSVGIGAYLVRL-GQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNNGVSHLTAVDD 321 (758)
T ss_dssp H-TTSCEEEEECSCEETHHHHHHHH-TCEEEEETTCCEESSCHHHHHHHHTSCCCSCTHHHHSHHHHTTTTSSSEEESSH
T ss_pred h-cCCCEEEEEccCCchHHHHHHhh-CCEEEEECCceEEEeCHHHHHHHhCCccccCchhcchhhHHHhcCCeeEEecCH
Confidence 2 47999999999999999987765 8999999999999999999999999988 4 7899999999999999999887
Q ss_pred -hHHHHHHHHHHHHhc
Q psy5220 269 -KLRFKIANLLALLQK 283 (286)
Q Consensus 269 -e~~~~l~~~L~~l~~ 283 (286)
+..+.++++|++|+.
T Consensus 322 ~eal~~ir~lLsyLP~ 337 (758)
T 3k8x_A 322 LAGVEKIVEWMSYVPA 337 (758)
T ss_dssp HHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHhhCCC
Confidence 999999999999986
No 25
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=99.96 E-value=2.5e-28 Score=245.92 Aligned_cols=203 Identities=17% Similarity=0.115 Sum_probs=159.0
Q ss_pred cccccccccCCCCCCHHHHHH-------------hhcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcE
Q psy5220 46 NQQVCTKCDYHMQIKARDRLN-------------NFLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDAL 112 (286)
Q Consensus 46 ~~~vc~~~~~~~~~~ar~ri~-------------~L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~v 112 (286)
...++| .+.++++|+.|. .|+|.|+|+|+... ++.++
T Consensus 368 l~~ivP---~~~pyD~r~vI~g~~~~~~~~~~~~~l~D~g~F~E~~~~---------------------------~g~~i 417 (793)
T 2x24_A 368 EIEFQP---SRGPYDPRWLLAGRPHPTLKGSWQSGFFDQGSFKEIMVP---------------------------WAQTV 417 (793)
T ss_dssp CCCCCC---CSSCCCHHHHHHCEECSSSSSCEECCSSCTTCCEEESCS---------------------------SCTTE
T ss_pred HHhhCC---CCCCCCHHHHHhcccccccccchhhccccCcceEEecCc---------------------------ccCcE
Confidence 467777 456799999999 99999999999873 37899
Q ss_pred EEEEEEEcCeeEEEEEEcCc---------------------ccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcch
Q psy5220 113 IVIKGSIMNLPLVVAVFEFE---------------------FMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGARM 171 (286)
Q Consensus 113 vtG~g~i~G~~v~v~a~d~~---------------------~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~i 171 (286)
|||+|+|+|++|+|++++.. +.||.+++++++|.+||+++|+++++|||+|+|++|+..
T Consensus 418 VtG~ARl~G~pVGVIAn~~~~v~~~~padP~~~~~~e~~~~~~gG~l~~~~a~KaarfI~~cd~f~iPlv~LvDtpGf~~ 497 (793)
T 2x24_A 418 VTGRARLGGIPVGVIAAETRTVELVVPADPANLDSEAKIIQQAGQVWFPDSAYKTAQAIKDFNREKLPLMIFANWRGFSG 497 (793)
T ss_dssp EEEEEEETTEEEEEEEECCSCEEEEECCCTTSTTCCCEEEEECTTEECHHHHHHHHHHHHHHHTTTCCEEEECCBCEECC
T ss_pred EEEEEEECCEEEEEEEEccccccccccCCccccchhhhhhhhcCCcccHHHHHHHHHHHHHhccCCCCEEEEecCCCCCC
Confidence 99999999999999999832 358999999999999999999999999999999999987
Q ss_pred ---hhchHhHHHHHHHHHHHHHHhcCCCCEEEEE--cCCcchhhhhhc--cccccE--EEEcCCcEEEeeChhhhhhhhh
Q psy5220 172 ---QEGLLSLMQMAKTTAILTKLSKKKIPFISVL--TNPTMGGVSASF--AFMGDI--VIAEPGALIGFAGPRVIKNTVK 242 (286)
Q Consensus 172 ---~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv--~g~~~GGg~~s~--a~~~d~--via~~~A~i~~~gp~vi~~~~g 242 (286)
+|-..-+..+++ .+.+++++++|+|+|| +|.++||++..+ ++.+|+ ++|||+|+++++||+....++-
T Consensus 498 G~~aE~~Gi~~~gAk---ll~A~a~a~VP~itvI~r~Ge~~GGa~~~~~~~~~~d~~ev~Awp~A~~~VM~pEgaa~Il~ 574 (793)
T 2x24_A 498 GMKDMYDQVLKFGAY---IVDGLRKYRQPVLIYIPPYAEVRGGSWAVMDTSINPLCIEMYADRESRASVLEPEGTVEIKY 574 (793)
T ss_dssp SHHHHHTTHHHHHHH---HHHHHHTCCSCEEEEECTTCEEEHHHHHTTCGGGSTTTEEEEEETTCEEESSCHHHHHHHHS
T ss_pred CHHHHHhhHHHHHHH---HHHHHHhcCCCEEEEEecCCcccchhHHhhhcccCccHHHHhhhccCEEEecCHHHHHHHHh
Confidence 221111223344 4666778899999999 889888765433 245687 8999999999999997422110
Q ss_pred -c------------------------cCC----CCC--------------------------CCHHHHHHcCccceEeCc
Q psy5220 243 -E------------------------KLP----DGF--------------------------QSSEFLLKKGALDMIIDR 267 (286)
Q Consensus 243 -~------------------------~l~----~~~--------------------------~~A~~~~~~G~vD~Vv~~ 267 (286)
. +.+ +.+ .++..+++.|+||.||+|
T Consensus 575 r~~~l~~~m~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~re~~~~p~y~~~a~~y~~~~~~p~r~a~~G~Id~VIdp 654 (793)
T 2x24_A 575 QKKDLVKTIRRLDPISKKLVEQLGVSELSDTDRKELEGQLKAREDLLLPMYHQVALHFADLHDTAGRMLEKGVIYDILEW 654 (793)
T ss_dssp CHHHHHHHHHHHCSSCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTSBHHHHHHTTSSSEEECH
T ss_pred hhhHHHHHHHhhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhcCCHHHHHHcCcCccccCH
Confidence 0 000 001 144556688999999999
Q ss_pred hhHHHHHHHHHHHH
Q psy5220 268 RKLRFKIANLLALL 281 (286)
Q Consensus 268 ~e~~~~l~~~L~~l 281 (286)
+++|..+...|+.+
T Consensus 655 ~~TR~~l~~~L~~~ 668 (793)
T 2x24_A 655 KTARSFLYWRLRRL 668 (793)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988854
No 26
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=99.94 E-value=1.8e-25 Score=223.57 Aligned_cols=161 Identities=17% Similarity=0.121 Sum_probs=132.3
Q ss_pred ccccccccCCCCCCHHHHHHh----------hcCCCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEEEEE
Q psy5220 47 QQVCTKCDYHMQIKARDRLNN----------FLDKNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALIVIK 116 (286)
Q Consensus 47 ~~vc~~~~~~~~~~ar~ri~~----------L~D~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vvtG~ 116 (286)
..+.|. .+.++++|+.|+. |+|.|||.|+... ++.++|||+
T Consensus 356 ~~~vP~--~~~pYD~R~vIa~~~d~~~~~~givD~~sF~E~~~~---------------------------~a~~iVtG~ 406 (758)
T 3k8x_A 356 VDFTPT--NDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSG---------------------------WAKGVVVGR 406 (758)
T ss_dssp CCCCCC--SSSCCCHHHHHHCEEETTEEECCSSCTTCCEEESTT---------------------------SCTTEEEEE
T ss_pred hccCCC--CCCCCCHHHHHhcccccccccceeecCCceEEEcCC---------------------------ccccEEEEE
Confidence 456775 4578999999999 9999999999873 378999999
Q ss_pred EEEcCeeEEEEEEcCc---------------------ccccCCChHHHHHHHHHHHHHHh-CCCcEEEEEeCCCcch---
Q psy5220 117 GSIMNLPLVVAVFEFE---------------------FMGGSMGSVVGERFIQGAQISLE-QKIPFVCITATGGARM--- 171 (286)
Q Consensus 117 g~i~G~~v~v~a~d~~---------------------~~gGs~~~~~~~K~~r~~~~A~~-~~iPlV~l~dsgGa~i--- 171 (286)
|+|+|+||+|++++.. ..+|.+++++++|.+||+++|++ +++|||+|+|++|+..
T Consensus 407 ARl~G~pVGVIAn~~~~~~~~~padP~~p~~~e~~~~~~gG~l~pe~a~KaArfI~lcd~~f~iPLv~LvDtpGf~~G~~ 486 (758)
T 3k8x_A 407 ARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQR 486 (758)
T ss_dssp EEETTEEEEEEEECCSCEEEEECCCTTSTTCCCEEEEECTTEECHHHHHHHHHHHHHHHHTSCCCEEECCCCCEECCSHH
T ss_pred EEECCEEEEEEEEccccccccCcccccCcchhhhHHhhcCCCCCHHHHHHHHHHHHHhhhccCCCEEEEecCCCCCCCHH
Confidence 9999999999999643 35799999999999999999999 9999999999999987
Q ss_pred hhchHhHHHHHHHHHHHHHHhcCCCCEEEEEc--CCcchhhhhhcc--ccccE--EEEcCCcEEEeeChhhhhh
Q psy5220 172 QEGLLSLMQMAKTTAILTKLSKKKIPFISVLT--NPTMGGVSASFA--FMGDI--VIAEPGALIGFAGPRVIKN 239 (286)
Q Consensus 172 ~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~--g~~~GGg~~s~a--~~~d~--via~~~A~i~~~gp~vi~~ 239 (286)
+|-..-+..+++ .+.+++++++|+|+||+ |.++||+++.++ +.+|+ ++|||+|+++++||+....
T Consensus 487 aE~~Gi~k~gAk---ll~A~a~a~VP~itVI~RkGe~~GGA~~am~~~~~ad~~~v~Awp~A~isVM~pEgaa~ 557 (758)
T 3k8x_A 487 DMFNEVLKYGSF---IVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVG 557 (758)
T ss_dssp HHHTTHHHHHHH---HHHHHHTCCSCEEEEECTTCEEETHHHHTTCGGGSTTTEEEEEETTCEEESSCHHHHHH
T ss_pred HHHccHHHHHHH---HHHHHHhCCCCEEEEEecCCccchHHHHHhCcccCCCHHHHhcCCCCEEEccCHHHHHH
Confidence 221111233344 46667788999999999 889998875443 23676 9999999999999997443
No 27
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=99.62 E-value=1.2e-14 Score=130.06 Aligned_cols=160 Identities=18% Similarity=0.175 Sum_probs=124.1
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch---HhHH-HHHHHHHHHHHHhc
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL---LSLM-QMAKTTAILTKLSK 193 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~---~~l~-~~~~~~~a~~~l~~ 193 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-. .... ........+..+.+
T Consensus 10 Va~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (254)
T 3hrx_A 10 VLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSG 89 (254)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHT
T ss_pred EEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchhhHHHHHHHHHHHHHHHh
Confidence 6667776655679999999999999999875 6789999999877 66775511 0111 11223334566778
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|.|+|||. .++++||++||.++|+|+++..+. +++.+|.. ++.+..+|+.++
T Consensus 90 ~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~eA~ 168 (254)
T 3hrx_A 90 LEKPLVVAVNGVAAGAGM-SLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEAL 168 (254)
T ss_dssp CSSCEEEEECSEEETHHH-HHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECCEeeehhh-hhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhhcCcccCHHHHH
Confidence 899999999999999996 588899999999999998874332 44445543 456778999999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.|+||.|++++++.+...++.+.+...
T Consensus 169 ~~GLv~~vv~~~~l~~~a~~~a~~la~~ 196 (254)
T 3hrx_A 169 ALGLVHRVVPAEKLMEEALSLAKELAQG 196 (254)
T ss_dssp HHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HCCCeEEecCcHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999998887654
No 28
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=99.60 E-value=3.1e-14 Score=125.82 Aligned_cols=160 Identities=10% Similarity=0.021 Sum_probs=120.9
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC-----Ccchhhch----HhHHH-HHHHHHHHHHHhc
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG-----GARMQEGL----LSLMQ-MAKTTAILTKLSK 193 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg-----Ga~i~Eg~----~~l~~-~~~~~~a~~~l~~ 193 (286)
|+++..|.. ..++++.++.+.+.++++.+.+..+.+|+|+..| |+++.+-. ..... .......+.++.+
T Consensus 15 v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 93 (233)
T 3r6h_A 15 IGVIRMDDG-KVNVLGPTMQQALNEAIDAADRDNVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLRGGFELSYRLLS 93 (233)
T ss_dssp EEEEEECCS-SSCCCSHHHHHHHHHHHHHHHHHTCSEEEEECCSSEEECCSCHHHHC---CHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCCCccCCcChHHHhccChHHHHHHHHHHHHHHHHHHh
Confidence 556666554 4599999999999999999876678999998876 66775411 11111 2223344566778
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|+|+|||. .++++||+++|.++|+|+++...+ +.+.+|.. ++.+..+|+.++
T Consensus 94 ~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~~l~ltg~~~~a~eA~ 172 (233)
T 3r6h_A 94 YPKPVVIACTGHAIAMGA-FLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTFFGETAL 172 (233)
T ss_dssp CSSCEEEEECSEEETHHH-HHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHHHHHHSCCEECHHHHH
T ss_pred CCCCEEEEECCcchHHHH-HHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHH
Confidence 899999999999999996 588999999999999999873332 22233322 456678999999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
+.|+||.|++++++.+...++.+.+...|
T Consensus 173 ~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 201 (233)
T 3r6h_A 173 AAGFIDEISLPEVVLSRAEEAAREFAGLN 201 (233)
T ss_dssp HHTSCSEECCGGGHHHHHHHHHHHHHTSC
T ss_pred HcCCCcEeeCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999998887643
No 29
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=99.60 E-value=3.4e-14 Score=127.15 Aligned_cols=160 Identities=10% Similarity=0.107 Sum_probs=124.0
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC-----Ccchhhch----Hh-HHHHHHHHHHHHHHhc
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG-----GARMQEGL----LS-LMQMAKTTAILTKLSK 193 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg-----Ga~i~Eg~----~~-l~~~~~~~~a~~~l~~ 193 (286)
|+++..|.--..++++.+..+.+.++++.+.+..+.+|+|...| |+++.+-. .. ...+..+...+..+.+
T Consensus 17 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (254)
T 3isa_A 17 AWTFTLSRPEKRNALSAELVEALIDGVDAAHREQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAG 96 (254)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHTTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEECCCCcCCCCCHHHHHHHHHHHHHhhcCCcEEEEEECCCCceeeCcChHHhhccCchhHHHHHHHHHHHHHHHHh
Confidence 66666666556799999999999999999877789999999877 56664410 01 1111222334566778
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh--------hhhhhhcc------CCCCCCCHHHHHHcC
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV--------IKNTVKEK------LPDGFQSSEFLLKKG 259 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v--------i~~~~g~~------l~~~~~~A~~~~~~G 259 (286)
.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.+.+.|
T Consensus 97 ~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~pg~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~G 175 (254)
T 3isa_A 97 SPSLTLALAHGRNFGAGV-DLFAACKWRYCTPEAGFRMPGLKFGLVLGTRRFRDIVGADQALSILGSARAFDADEARRIG 175 (254)
T ss_dssp CSSEEEEEECSEEETHHH-HHHHHSSEEEECTTCEEECCGGGGTCCCSHHHHHHHHCHHHHHHHHTTTCEEEHHHHHHTT
T ss_pred CCCCEEEEECCeEeecch-hHHHhCCEEEEcCCCEEECchhccCccHHHHHHHHHcCHHHHHHHHHhCCCCcHHHHHHCC
Confidence 899999999999999995 588899999999999999864332 44444433 557778999999999
Q ss_pred ccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 260 ALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 260 ~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+||.|++++++.+.+.++++.+...
T Consensus 176 Lv~~vv~~~~l~~~a~~~a~~la~~ 200 (254)
T 3isa_A 176 FVRDCAAQAQWPALIDAAAEAATAL 200 (254)
T ss_dssp SSSEECCGGGHHHHHHHHHHHHTTS
T ss_pred CccEEeChhHHHHHHHHHHHHHHcC
Confidence 9999999999999999999888754
No 30
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=99.57 E-value=5.2e-14 Score=127.36 Aligned_cols=166 Identities=17% Similarity=0.176 Sum_probs=123.3
Q ss_pred EEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch--------HhHHHHHH
Q psy5220 118 SIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL--------LSLMQMAK 183 (286)
Q Consensus 118 ~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~--------~~l~~~~~ 183 (286)
.+++. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-. .....+.+
T Consensus 20 ~~~~g-Va~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~ 98 (274)
T 4fzw_C 20 HVEKG-VMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVER 98 (274)
T ss_dssp EEETT-EEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHH
T ss_pred EEECC-EEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHH
Confidence 45543 5666666555679999999999999999875 6679999999876 56664310 00111222
Q ss_pred HH-HHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------C
Q psy5220 184 TT-AILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------L 245 (286)
Q Consensus 184 ~~-~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l 245 (286)
.+ ..+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++...++ +.+.+|.. +
T Consensus 99 ~~~~l~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~lll 177 (274)
T 4fzw_C 99 FYNPLVRRLAKLPKPVICAVNGVAAGAGA-TLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLAL 177 (274)
T ss_dssp THHHHHHHHHHCSSCEEEEECSCEETHHH-HHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCceeecCc-eeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHHHHHHH
Confidence 22 23445667899999999999999996 588899999999999999864332 34444543 4
Q ss_pred CCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 246 PDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 246 ~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
+.+..+|+.+++.|+||.|++++++.+.+.++.+.+...|
T Consensus 178 tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~ 217 (274)
T 4fzw_C 178 LGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQP 217 (274)
T ss_dssp HCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSC
T ss_pred hCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCC
Confidence 4677899999999999999999999999999998887643
No 31
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=99.57 E-value=2.8e-14 Score=128.07 Aligned_cols=164 Identities=12% Similarity=0.183 Sum_probs=122.8
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH--hHHHHH-HHHHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL--SLMQMA-KTTAILT 189 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~--~l~~~~-~~~~a~~ 189 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|+.+| |+++.|-.. ...... .....+.
T Consensus 11 ~~~~-Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 89 (258)
T 4fzw_A 11 RQQR-VLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWA 89 (258)
T ss_dssp EETT-EEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHHHHTCSHHHHHH
T ss_pred EECC-EEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhhHHHhHHHHHHH
Confidence 4554 5555555545569999999999999999875 6679999999877 667755110 001111 1112345
Q ss_pred HHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCH
Q psy5220 190 KLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSS 252 (286)
Q Consensus 190 ~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A 252 (286)
++...++|+|++|.|+|+|||. .++++||++||.++|+|+++...+ +.+.+|.. ++.+..+|
T Consensus 90 ~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~i~a 168 (258)
T 4fzw_A 90 RLQAFNKPLIAAVNGYALGAGC-ELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITA 168 (258)
T ss_dssp HHHTCCSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEH
T ss_pred HHHHCCCCEEEEEcCcceeeee-EeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHHHcCCcCcH
Confidence 5677899999999999999996 588899999999999999873332 34445533 44677899
Q ss_pred HHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 253 EFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 253 ~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+++.|+||.|++++++.+...++.+.+...
T Consensus 169 ~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 200 (258)
T 4fzw_A 169 QQAQQAGLVSDVFPSDLTLEYALQLASKMARH 200 (258)
T ss_dssp HHHHHHTSCSEEECTTTHHHHHHHHHHHHTTS
T ss_pred HHHHHCCCeeEEeCchHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999998888754
No 32
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=99.57 E-value=6.7e-14 Score=125.19 Aligned_cols=160 Identities=18% Similarity=0.169 Sum_probs=122.8
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH---hHHH-HHHHHHHHHHHhc
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL---SLMQ-MAKTTAILTKLSK 193 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~---~l~~-~~~~~~a~~~l~~ 193 (286)
|+++..|..-..++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-.. .... +..+...+..+.+
T Consensus 10 v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (254)
T 3gow_A 10 VLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSG 89 (254)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHT
T ss_pred EEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhcchhHHHHHHHHHHHHHHHHh
Confidence 6666666655779999999999999999875 5679999999877 567754110 1111 1223334566778
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|+|+|||. .++++||++||.++|+|+++.... +.+.+|.. ++.+..+|+.+.
T Consensus 90 ~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~ 168 (254)
T 3gow_A 90 LEKPLVVAVNGVAAGAGM-SLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEAL 168 (254)
T ss_dssp CSSCEEEEECSEEETHHH-HHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECCeeehHHH-HHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHH
Confidence 899999999999999996 588899999999999999874432 33444432 346778999999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.|+||.|++++++.+...++.+.+...
T Consensus 169 ~~Glv~~vv~~~~l~~~a~~~a~~la~~ 196 (254)
T 3gow_A 169 ALGLVHRVVPAEKLMEEALSLAKELAQG 196 (254)
T ss_dssp HHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HcCCCCEecCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999888754
No 33
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=99.56 E-value=2.8e-14 Score=129.28 Aligned_cols=159 Identities=15% Similarity=0.143 Sum_probs=123.2
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC-----Ccchhhch----Hh-HHHHHHHHHHHHHHhc
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG-----GARMQEGL----LS-LMQMAKTTAILTKLSK 193 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg-----Ga~i~Eg~----~~-l~~~~~~~~a~~~l~~ 193 (286)
|+++..|.--..++++.+..+.+.++++.+ +..+.+|+|...| |+++.+-. .. ..........+..+.+
T Consensus 26 va~itlnrP~~~Nal~~~~~~~L~~al~~~-d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 104 (275)
T 3hin_A 26 VLTIGLNRPKKRNALNDGLMAALKDCLTDI-PDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQY 104 (275)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHTSSC-CTTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCcCCCCCHHHHHHHHHHHHHh-CcCceEEEEECCCCCccCCCCHHHHhccChhhHHHHHHHHHHHHHHHHh
Confidence 667777666567999999999999999988 5789999999876 56775411 11 1111223334566778
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.++
T Consensus 105 ~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~i~A~eA~ 183 (275)
T 3hin_A 105 CRVPVIAALKGAVIGGGL-ELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAEGV 183 (275)
T ss_dssp CSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECCeeehHHH-HHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHH
Confidence 899999999999999995 588899999999999999874332 34445533 446778999999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.|+||.|++++++.+...++.+.+...
T Consensus 184 ~~GLv~~vv~~~~l~~~a~~~a~~ia~~ 211 (275)
T 3hin_A 184 VHGFSQYLIENGSAYDKALELGNRVAQN 211 (275)
T ss_dssp HHTSCSEEESSSCHHHHHHHHHHHHTTS
T ss_pred HCCCCCEEeChhHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999888754
No 34
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=99.56 E-value=9.3e-14 Score=124.78 Aligned_cols=163 Identities=18% Similarity=0.217 Sum_probs=122.5
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch-----HhHHHHHHHH-H
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL-----LSLMQMAKTT-A 186 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~-----~~l~~~~~~~-~ 186 (286)
.+|. |+++..|.--. ++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-. .....+.+.. .
T Consensus 12 ~~~~-v~~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 89 (261)
T 3pea_A 12 VEDH-IAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQV 89 (261)
T ss_dssp EETT-EEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHH
T ss_pred EECC-EEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHHHHHHHH
Confidence 3444 55555554445 9999999999999999875 5679999999876 56775411 1111122222 2
Q ss_pred HHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCC
Q psy5220 187 ILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGF 249 (286)
Q Consensus 187 a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~ 249 (286)
.+..+.+.++|+|++|.|+|+|||. .++++||++||.++++|++....+ +.+.+|.. ++.+.
T Consensus 90 ~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~ 168 (261)
T 3pea_A 90 TFERVEKCSKPVIAAIHGAALGGGL-EFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTP 168 (261)
T ss_dssp HHHHHHTCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCC
T ss_pred HHHHHHhCCCCEEEEECCeeehHHH-HHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCC
Confidence 4566778899999999999999996 588899999999999999864332 34444432 34667
Q ss_pred CCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 250 QSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 250 ~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+|+.+++.|+||.|++++++.+...++.+.+...
T Consensus 169 ~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 203 (261)
T 3pea_A 169 ITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGK 203 (261)
T ss_dssp EEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcC
Confidence 89999999999999999999999999998888754
No 35
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=99.56 E-value=8.7e-14 Score=125.23 Aligned_cols=161 Identities=15% Similarity=0.186 Sum_probs=123.2
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------Ccchhhch----HhHHHH-HHHHHHHHH
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGL----LSLMQM-AKTTAILTK 190 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~----~~l~~~-~~~~~a~~~ 190 (286)
.|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-. ...... ......+..
T Consensus 18 ~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 97 (265)
T 3kqf_A 18 HVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEM 97 (265)
T ss_dssp TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCHHHHHHHHHHHHHHHHH
Confidence 36666666666679999999999999999876 5679999999876 56775411 111111 222334566
Q ss_pred HhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHH
Q psy5220 191 LSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSE 253 (286)
Q Consensus 191 l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~ 253 (286)
+.+.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+
T Consensus 98 l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~ 176 (265)
T 3kqf_A 98 VEQLPQPVIAAINGIALGGGT-ELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQ 176 (265)
T ss_dssp HHTCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred HHhCCCCEEEEECCeeehHHH-HHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence 778899999999999999996 588899999999999999874332 34444432 346678999
Q ss_pred HHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 254 FLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 254 ~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+.+.|+||.|++++++.+...++++.+...
T Consensus 177 eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 207 (265)
T 3kqf_A 177 EAKEYGLVEFVVPVHLLEEKAIEIAEKIASN 207 (265)
T ss_dssp HHHHHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HHHHCCCccEEeCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999888754
No 36
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=99.56 E-value=8.2e-14 Score=125.67 Aligned_cols=161 Identities=11% Similarity=0.144 Sum_probs=121.7
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch-------HhHHH-HHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL-------LSLMQ-MAKTTAILT 189 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~-------~~l~~-~~~~~~a~~ 189 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|+..| |+++.+-. ..... ...+...+.
T Consensus 14 va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (268)
T 3i47_A 14 VGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMY 93 (268)
T ss_dssp EEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHHHHHHHHHHHHHHHH
Confidence 5666666555679999999999999999875 6679999999876 56664411 00001 122233455
Q ss_pred HHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh----------hhhhhhcc------CCCCCCCHH
Q psy5220 190 KLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV----------IKNTVKEK------LPDGFQSSE 253 (286)
Q Consensus 190 ~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v----------i~~~~g~~------l~~~~~~A~ 253 (286)
++.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+
T Consensus 94 ~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~~~vG~~~A~~llltg~~i~A~ 172 (268)
T 3i47_A 94 SISQSPKPTIAMVQGAAFGGGA-GLAAACDIAIASTSARFCFSEVKLGLIPAVISPYVVRAIGERAAKMLFMSAEVFDAT 172 (268)
T ss_dssp HHHHCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCTTTHHHHHHHHCHHHHHHHHHHCCEEEHH
T ss_pred HHHhCCCCEEEEECCEEEhHhH-HHHHhCCEEEEcCCCEEECcccccCCCcccHHHHHHHHhCHHHHHHHHHcCCccCHH
Confidence 6677899999999999999995 588899999999999998863332 23334432 346678899
Q ss_pred HHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 254 FLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 254 ~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
.+.+.|+||.|++++++.+.+.++++.+...|
T Consensus 173 eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~ 204 (268)
T 3i47_A 173 RAYSLNLVQHCVPDDTLLEFTLKYASQISNNA 204 (268)
T ss_dssp HHHHTTSCSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred HHHHcCCCcEeeChhHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999998887643
No 37
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=99.56 E-value=7.8e-14 Score=124.87 Aligned_cols=160 Identities=13% Similarity=0.114 Sum_probs=121.9
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHhH-----H-HHHHHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLSL-----M-QMAKTTAILTKL 191 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~l-----~-~~~~~~~a~~~l 191 (286)
|+++..|..-..++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-.... . ....+...+.++
T Consensus 16 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l 95 (256)
T 3qmj_A 16 VRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKAL 95 (256)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCCCSSHHHHHHHHH
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHHHHHHHHHHHHHH
Confidence 6666666666679999999999999999875 5679999999876 56764411000 0 011222334556
Q ss_pred hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHH
Q psy5220 192 SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEF 254 (286)
Q Consensus 192 ~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~ 254 (286)
.+.++|+|++|.|+|+|||. .++++||++||.++|+|+++...+ +.+.+|.. ++.+..+|+.
T Consensus 96 ~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~e 174 (256)
T 3qmj_A 96 AGFPKPLICAVNGLGVGIGA-TILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEE 174 (256)
T ss_dssp HHCCSCEEEEECSEEETHHH-HGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHHHHHSCCCEEHHH
T ss_pred HhCCCCEEEEECCeehhHHH-HHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence 67899999999999999996 588999999999999998864332 34444533 4567789999
Q ss_pred HHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 255 LLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 255 ~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+.|+||.|++++++.+.+.++++.+...
T Consensus 175 A~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 204 (256)
T 3qmj_A 175 ALRMGLVWRICSPEELLPEARRHAEILAAK 204 (256)
T ss_dssp HHHHTSSSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HHHCCCccEEeCHhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998888754
No 38
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=99.55 E-value=1.5e-13 Score=125.49 Aligned_cols=164 Identities=12% Similarity=0.110 Sum_probs=121.6
Q ss_pred EcCeeEEEEEEc-CcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC-----CcchhhchH--------hHHHH-HH
Q psy5220 119 IMNLPLVVAVFE-FEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG-----GARMQEGLL--------SLMQM-AK 183 (286)
Q Consensus 119 i~G~~v~v~a~d-~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg-----Ga~i~Eg~~--------~l~~~-~~ 183 (286)
.+|. |+++..| ..-..++++.++.+.+.++++.+.+....+|+|...| |+++.+-.. ....+ ..
T Consensus 29 ~~~~-v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 107 (291)
T 2fbm_A 29 KEDG-FTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDT 107 (291)
T ss_dssp ECSS-EEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSCSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EeCC-EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEECCCCCccCCcCHHHHHhcccccchhHHHHHHHH
Confidence 3443 6666666 2334699999999999999999876666899999865 667754110 00111 11
Q ss_pred HHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CC
Q psy5220 184 TTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LP 246 (286)
Q Consensus 184 ~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~ 246 (286)
+...+..+...++|+|++|.|+|+|||. .++++||++||.++|+|++...++ +.+.+|.. ++
T Consensus 108 ~~~~~~~l~~~~kPvIAaV~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~el~lt 186 (291)
T 2fbm_A 108 IKNFVNTFIQFKKPIVVSVNGPAIGLGA-SILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIA 186 (291)
T ss_dssp HHHHHHHHHHCCSCEEEEECSCEETHHH-HTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTS
T ss_pred HHHHHHHHHhCCCCEEEEECCeeecHHH-HHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhHHHHHHHHHc
Confidence 2233456677899999999999999995 588999999999999998863321 34445542 56
Q ss_pred CCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 247 DGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 247 ~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+..+|+.+++.|+||.|++++++.+.+.+++..+...
T Consensus 187 g~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~ 224 (291)
T 2fbm_A 187 GRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASY 224 (291)
T ss_dssp CCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTS
T ss_pred CCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhC
Confidence 77789999999999999999998888888888877654
No 39
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=99.55 E-value=6.2e-14 Score=125.53 Aligned_cols=159 Identities=14% Similarity=0.170 Sum_probs=120.0
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHhHHHHHHHHHHHHHHhcCCCC
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLSLMQMAKTTAILTKLSKKKIP 197 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~l~~~~~~~~a~~~l~~~~vP 197 (286)
|+++..|..-..++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-... .....+...+..+.+.++|
T Consensus 16 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~~~~~~~~~~~~l~~~~kP 94 (255)
T 3p5m_A 16 VLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA-GAADAANRVVRAITSLPKP 94 (255)
T ss_dssp EEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH-HHHHHHHHHHHHHHHCSSC
T ss_pred EEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch-HHHHHHHHHHHHHHhCCCC
Confidence 6666666666779999999999999999875 5679999999877 4566542111 1112222345566778999
Q ss_pred EEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHHHcCc
Q psy5220 198 FISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLLKKGA 260 (286)
Q Consensus 198 ~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~~~G~ 260 (286)
+|++|.|.|+|||. .++++||++||.++|+|++..... +.+.+|.. ++.+..+|+.+.+.|+
T Consensus 95 vIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GL 173 (255)
T 3p5m_A 95 VIAGVHGAAVGFGC-SLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGM 173 (255)
T ss_dssp EEEEECSEEETHHH-HHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHTTS
T ss_pred EEEEeCCeehhhHH-HHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCC
Confidence 99999999999996 588899999999999999864332 33344432 3466789999999999
Q ss_pred cceEeCchhHHHHHHHHHHHHhcC
Q psy5220 261 LDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 261 vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
||.|++++++.+.+.++++.+...
T Consensus 174 v~~vv~~~~l~~~a~~~a~~la~~ 197 (255)
T 3p5m_A 174 ISHITSADEYESVLTDVLRSVSGG 197 (255)
T ss_dssp CSEECCTTCHHHHHHHHHHHHHTS
T ss_pred CCEeeCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998888754
No 40
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=99.55 E-value=8e-14 Score=126.37 Aligned_cols=162 Identities=14% Similarity=0.072 Sum_probs=120.9
Q ss_pred cCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch----HhHHH-HHHHHHHH
Q psy5220 120 MNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL----LSLMQ-MAKTTAIL 188 (286)
Q Consensus 120 ~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~----~~l~~-~~~~~~a~ 188 (286)
+|. |+++..|.--. ++++....+.+.++++.+. +..+.+|+|..+| |+++.+-. ..... ...+...+
T Consensus 31 ~~~-Va~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 108 (277)
T 4di1_A 31 DQG-LATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEADTAARVRLEAI 108 (277)
T ss_dssp ETT-EEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred ECC-EEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccChHHHHHHHHHHHHHH
Confidence 443 55555555445 9999999999999999875 6679999998876 56665411 11111 12223345
Q ss_pred HHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCC
Q psy5220 189 TKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQS 251 (286)
Q Consensus 189 ~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~ 251 (286)
..+.+.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+
T Consensus 109 ~~l~~~~kPvIAav~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~i~ 187 (277)
T 4di1_A 109 DAVAAIPKPTVAAVTGYALGAGL-TLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFD 187 (277)
T ss_dssp HHHHHCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEE
T ss_pred HHHHhCCCCEEEEECCeEehhHH-HHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCC
Confidence 56677899999999999999996 588899999999999999863332 33444432 3466789
Q ss_pred HHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 252 SEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 252 A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
|+.+++.|+||.|++++++.+...++++.+...
T Consensus 188 A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~ 220 (277)
T 4di1_A 188 AEEALALGLIDDMVAPDDVYDSAVAWARRYLEC 220 (277)
T ss_dssp HHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTS
T ss_pred HHHHHHCCCccEEeChhHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999998877654
No 41
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=99.54 E-value=5.6e-14 Score=127.45 Aligned_cols=164 Identities=16% Similarity=0.164 Sum_probs=123.7
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch---HhHHHHHHHHHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL---LSLMQMAKTTAILT 189 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~---~~l~~~~~~~~a~~ 189 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-. .........+..+.
T Consensus 31 ~~~~-va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 109 (278)
T 3h81_A 31 RDQR-VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWG 109 (278)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHHHHHHTTTGGGH
T ss_pred EECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhhHHHHHHHHHHH
Confidence 4454 7777777666779999999999999999876 5679999998865 56765411 00001111222245
Q ss_pred HHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCH
Q psy5220 190 KLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSS 252 (286)
Q Consensus 190 ~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A 252 (286)
++.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|
T Consensus 110 ~l~~~~kPvIAav~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A 188 (278)
T 3h81_A 110 KLAAVRTPTIAAVAGYALGGGC-ELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDA 188 (278)
T ss_dssp HHHTCCSCEEEEECBEEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEH
T ss_pred HHHhCCCCEEEEECCeeehHHH-HHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHHHHHHHhCCCcCH
Confidence 6777899999999999999996 588899999999999999763332 34444532 34677899
Q ss_pred HHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 253 EFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 253 ~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+.+.|+||.|++++++.+...++++.+...
T Consensus 189 ~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 220 (278)
T 3h81_A 189 AEAERSGLVSRVVPADDLLTEARATATTISQM 220 (278)
T ss_dssp HHHHHHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HHHHHCCCccEEeChhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999998888754
No 42
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=99.54 E-value=1.7e-13 Score=121.07 Aligned_cols=159 Identities=13% Similarity=0.167 Sum_probs=118.2
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC-----Ccchhhch---HhHHH-HHHHHHHHHHHhcC
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG-----GARMQEGL---LSLMQ-MAKTTAILTKLSKK 194 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg-----Ga~i~Eg~---~~l~~-~~~~~~a~~~l~~~ 194 (286)
|+++..|.. ..++++.+..+.+.++++.+.+. ..+|+|+..| |+++.+-. ..... .......+.++.+.
T Consensus 16 v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d-~~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (232)
T 3ot6_A 16 VATLTLNNG-KVNAISPDVIIAFNAALDQAEKD-RAIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLARRMLSH 93 (232)
T ss_dssp EEEEEECCT-TTTCBCHHHHHHHHHHHHHHHHT-TCEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEECCC-CCCCCCHHHHHHHHHHHHHHhcC-CCEEEEECCCCCccCCcCHHHHhhChHHHHHHHHHHHHHHHHHHcC
Confidence 555555543 35999999999999999998754 4789998776 66775411 11111 12223345667788
Q ss_pred CCCEEEEEcCCcchhhhhhccccccEEEEcCC-cEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 195 KIPFISVLTNPTMGGVSASFAFMGDIVIAEPG-ALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 195 ~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~-A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
++|+|++|.|+|+|||. .++++||++||.++ ++|+++.... +.+.+|.. ++.+..+|+.++
T Consensus 94 ~kPvIAav~G~a~GgG~-~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l~ltg~~i~A~eA~ 172 (232)
T 3ot6_A 94 PFPIIVACPGHAVAKGA-FLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAEMFDPEGAM 172 (232)
T ss_dssp SSCEEEECCEEEETHHH-HHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHHHTSCCEECHHHHH
T ss_pred CCCEEEEECCEeehHHH-HHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHHHHcCCccCHHHHH
Confidence 99999999999999996 58889999999998 7998863322 12223322 457778999999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
+.|+||.|++++++.+...++.+.+...|
T Consensus 173 ~~GLv~~vv~~~~l~~~a~~~a~~la~~~ 201 (232)
T 3ot6_A 173 AAGFLDKVVSVEELQGAALAVAAQLKKIN 201 (232)
T ss_dssp HHTSCSEEECTTTHHHHHHHHHHHHTTSC
T ss_pred HCCCCCEecCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999998887643
No 43
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=99.54 E-value=1.2e-13 Score=124.23 Aligned_cols=160 Identities=14% Similarity=0.201 Sum_probs=121.0
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------CcchhhchH--------hHHH-HHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGLL--------SLMQ-MAKTTAI 187 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~~--------~l~~-~~~~~~a 187 (286)
|+++..|.--..++++.+..+.+.++++.+. +..+.+|+|...| |+++.+-.. .... .......
T Consensus 14 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (263)
T 3lke_A 14 ALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHC 93 (263)
T ss_dssp EEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 5666666555779999999999999999875 5679999998855 555543111 1111 1223334
Q ss_pred HHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCC
Q psy5220 188 LTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQ 250 (286)
Q Consensus 188 ~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~ 250 (286)
+.++.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..
T Consensus 94 ~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~~~A~~l~ltg~~~ 172 (263)
T 3lke_A 94 VLEIFTSPKVTVALINGYAYGGGF-NMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLF 172 (263)
T ss_dssp HHHHHTCSSEEEEEECSEEETHHH-HGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred HHHHHhCCCCEEEEECCEeeHHHH-HHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCc
Confidence 566778899999999999999996 588999999999999998863221 34444432 346678
Q ss_pred CHHHHHHcCccceEeC-chhHHHHHHHHHHHHhcC
Q psy5220 251 SSEFLLKKGALDMIID-RRKLRFKIANLLALLQKK 284 (286)
Q Consensus 251 ~A~~~~~~G~vD~Vv~-~~e~~~~l~~~L~~l~~~ 284 (286)
+|+.+.+.|+||.|++ ++++.+.+.++.+.+...
T Consensus 173 ~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~ 207 (263)
T 3lke_A 173 TSEEALRLGLIQEICENKQELQERVKNYLKAVSEG 207 (263)
T ss_dssp EHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhC
Confidence 8999999999999999 889999999998888764
No 44
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=99.54 E-value=3.5e-13 Score=122.22 Aligned_cols=163 Identities=10% Similarity=0.085 Sum_probs=121.6
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch----Hh----HHHH-HH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL----LS----LMQM-AK 183 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~----~~----l~~~-~~ 183 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+ +|+|...| |+++.+-. .. ...+ ..
T Consensus 32 ~~~~-va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 109 (280)
T 2f6q_A 32 SEDG-ITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVL 109 (280)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHH
T ss_pred EECC-EEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhHHHHHHHHH
Confidence 3443 6777776655679999999999999999875 5678 99998855 66775410 01 0111 11
Q ss_pred HHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CC
Q psy5220 184 TTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LP 246 (286)
Q Consensus 184 ~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~ 246 (286)
+...+.++.+.++|+|++|.|.|+|||. .++++||++||.++|+|++...++ +.+.+|.. ++
T Consensus 110 ~~~~~~~l~~~~kPvIAav~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~lt 188 (280)
T 2f6q_A 110 LREFVGCFIDFPKPLIAVVNGPAVGISV-TLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIF 188 (280)
T ss_dssp HHHHHHHHHSCCSCEEEEECSCEETHHH-HGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCEEEEECCeeehHHH-HHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHHHHHHHHHc
Confidence 2234556778899999999999999996 588999999999999999874432 33444442 56
Q ss_pred CCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 247 DGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 247 ~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+..+|+.+.+.|+||.|++++++.+.+.++++.+...
T Consensus 189 g~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 226 (280)
T 2f6q_A 189 GKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKL 226 (280)
T ss_dssp CCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhC
Confidence 77789999999999999999999999998888887654
No 45
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=99.54 E-value=8.6e-14 Score=125.14 Aligned_cols=163 Identities=13% Similarity=0.216 Sum_probs=121.9
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch----------HhHHH-H
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL----------LSLMQ-M 181 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~----------~~l~~-~ 181 (286)
++|. |+++..|.--. ++++.+..+.+.++++.+. +..+.+|+|..+| |+++.+-. ..... .
T Consensus 13 ~~~~-v~~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 90 (263)
T 3l3s_A 13 LSEG-VLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLF 90 (263)
T ss_dssp ESSS-EEEEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHH
T ss_pred eeCC-EEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHHHHHHH
Confidence 3444 56666665555 9999999999999999886 5679999998876 56664311 01111 1
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh----------hhhhhhcc------C
Q psy5220 182 AKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV----------IKNTVKEK------L 245 (286)
Q Consensus 182 ~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v----------i~~~~g~~------l 245 (286)
......+.++.+.++|+|++|.|+|+|||. .++++||++||.++|+|+++...+ +.+.+|.. +
T Consensus 91 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~~~g~~~~l~r~vG~~~A~~l~l 169 (263)
T 3l3s_A 91 EACSALMLDLAHCPKPTIALVEGIATAAGL-QLMAACDLAYASPAARFCLPGVQNGGFCTTPAVAVSRVIGRRAVTEMAL 169 (263)
T ss_dssp HHHHHHHHHHHTCSSCEEEEESSEEETHHH-HHHHHSSEEEECTTCEEECCTTTTTSCCHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEEEHHHH-HHHHHCCEEEecCCCEEeCchhccCCCCccHHHHHHHHcCHHHHHHHHH
Confidence 223334566778899999999999999996 588899999999999999864432 22333332 3
Q ss_pred CCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 246 PDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 246 ~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+..+|+.+.+.|+||.|++++++.+.+.++.+.+...
T Consensus 170 tg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 208 (263)
T 3l3s_A 170 TGATYDADWALAAGLINRILPEAALATHVADLAGALAAR 208 (263)
T ss_dssp HCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhC
Confidence 456678999999999999999999999999999888764
No 46
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=99.54 E-value=1.4e-13 Score=123.23 Aligned_cols=160 Identities=12% Similarity=0.090 Sum_probs=119.3
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH--hHHHHHH--HHHHHHHHhc
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL--SLMQMAK--TTAILTKLSK 193 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~--~l~~~~~--~~~a~~~l~~ 193 (286)
|+++..|..-..++++..+.+.+.++++.+. +..+.+|+|...| |+++.+-.. ......+ ....+..+.+
T Consensus 13 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~ 92 (257)
T 2ej5_A 13 VAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHH 92 (257)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTHHHHHHHHHH
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchhHHHHHHHHHHHHHHHh
Confidence 6666666655679999999999999999875 5679999999865 677754110 0011111 2233456677
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.+.
T Consensus 93 ~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~ 171 (257)
T 2ej5_A 93 LEKPVVAAVNGAAAGAGM-SLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAA 171 (257)
T ss_dssp CCSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECccccchhH-HHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCCccCHHHHH
Confidence 899999999999999996 578899999999999999863332 33444432 346678899999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.|+||.|++++++.+...++++.+...
T Consensus 172 ~~GLv~~vv~~~~l~~~a~~~a~~la~~ 199 (257)
T 2ej5_A 172 ALGLATKVIPLSDWEEEVKQFAERLSAM 199 (257)
T ss_dssp HHTCCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HcCCcceecChhHHHHHHHHHHHHHHhC
Confidence 9999999999999999988888887654
No 47
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=99.53 E-value=8.1e-14 Score=125.34 Aligned_cols=165 Identities=14% Similarity=0.145 Sum_probs=123.7
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH-h-HHHHH-HHHHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL-S-LMQMA-KTTAILT 189 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~-~-l~~~~-~~~~a~~ 189 (286)
.+|.-|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. . ..... .+...+.
T Consensus 15 ~~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 94 (263)
T 3moy_A 15 RPVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWD 94 (263)
T ss_dssp CCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTTTTHHHH
T ss_pred EeCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchhHHHHHHHHHHH
Confidence 455547777777666779999999999999999875 6679999998866 567754110 0 00011 1112345
Q ss_pred HHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCH
Q psy5220 190 KLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSS 252 (286)
Q Consensus 190 ~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A 252 (286)
.+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++...++ +.+.+|.. ++.+..+|
T Consensus 95 ~l~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a 173 (263)
T 3moy_A 95 SLTQVRKPIVAAVAGYALGGGC-ELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTA 173 (263)
T ss_dssp HHTTCCSCEEEEECBEEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHHHHHHHHCCEEEH
T ss_pred HHHhCCCCEEEEECCEeehHHH-HHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHHHHHHHHcCCCCCH
Confidence 6778899999999999999996 588899999999999999863332 34444432 34667889
Q ss_pred HHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 253 EFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 253 ~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+++.|+||.|++++++.+...++.+.+...
T Consensus 174 ~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 205 (263)
T 3moy_A 174 EEAERVGLVSRIVPAADLLDEALAVAQRIARM 205 (263)
T ss_dssp HHHHHTTSCSEEECGGGHHHHHHHHHHHHHHS
T ss_pred HHHHHCCCccEecCchHHHHHHHHHHHHHHhC
Confidence 99999999999999999999888888877654
No 48
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=99.53 E-value=7.7e-14 Score=126.10 Aligned_cols=164 Identities=16% Similarity=0.129 Sum_probs=124.0
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH------hHHH-HHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL------SLMQ-MAKTT 185 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~------~l~~-~~~~~ 185 (286)
.++..|+++..|.-- .++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. .... +....
T Consensus 19 ~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 97 (272)
T 3qk8_A 19 PGEHGVLNLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMREAR 97 (272)
T ss_dssp ECSTTEEEEEECCHH-HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EeCCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHHHHHHHH
Confidence 445457777776655 89999999999999999875 5689999999877 456644100 0011 12223
Q ss_pred HHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCC
Q psy5220 186 AILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDG 248 (286)
Q Consensus 186 ~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~ 248 (286)
..+.++.+.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+
T Consensus 98 ~~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~ 176 (272)
T 3qk8_A 98 DLVLNLVNLDKPVVSAIRGPAVGAGL-VVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCE 176 (272)
T ss_dssp HHHHHHHTCCSCEEEEECSEEEHHHH-HHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCEEEEECCeeehHHH-HHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCC
Confidence 34566778999999999999999995 588899999999999999863322 33444432 3466
Q ss_pred CCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 249 FQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 249 ~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
..+|+.+++.|+||.|++++++.+.+.++++.+...
T Consensus 177 ~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 212 (272)
T 3qk8_A 177 TLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQG 212 (272)
T ss_dssp CEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcC
Confidence 788999999999999999999999999999888764
No 49
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=99.53 E-value=2.3e-13 Score=121.38 Aligned_cols=160 Identities=9% Similarity=0.042 Sum_probs=121.0
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEe-CC-----Ccchhhch-----HhHHHH-HHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITA-TG-----GARMQEGL-----LSLMQM-AKTTAILTK 190 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~d-sg-----Ga~i~Eg~-----~~l~~~-~~~~~a~~~ 190 (286)
|+++..|.--..++++..+.+.+.++++.+. +..+.+|+|.. +| |+++.+-. .....+ ......+..
T Consensus 10 v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (250)
T 2a7k_A 10 VRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQA 89 (250)
T ss_dssp EEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHHHHHHHHHHH
Confidence 6666666555679999999999999999885 56799999998 55 56775410 000111 122234556
Q ss_pred HhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh----------hhhhhhcc------CCCCCCCHHH
Q psy5220 191 LSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV----------IKNTVKEK------LPDGFQSSEF 254 (286)
Q Consensus 191 l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v----------i~~~~g~~------l~~~~~~A~~ 254 (286)
+.+.++|+|++|.|+|+|||. .++++||++||.++|+|+++...+ +.+.+|.. ++.+..+|+.
T Consensus 90 i~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~~~vG~~~a~~l~ltg~~~~a~e 168 (250)
T 2a7k_A 90 VLNVNKPTIAAVDGYAIGMGF-QFALMFDQRLMASTANFVMPELKHGIGCSVGAAILGFTHGFSTMQEIIYQCQSLDAPR 168 (250)
T ss_dssp HHTCCSCEEEEECSEEETHHH-HHHTTSSEEEEETTCEEECCGGGGTCCCHHHHHHHHHHHCHHHHHHHHHHCCCBCHHH
T ss_pred HHcCCCCEEEEECCeEeHHHH-HHHHhCCEEEEcCCCEEeCcccccCCCCCcHHHHHHHHhHHHHHHHHHHcCCcccHHH
Confidence 778899999999999999996 588899999999999999874332 23334432 3467789999
Q ss_pred HHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 255 LLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 255 ~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+.|+||.|++++++.+...++++.+...
T Consensus 169 A~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 198 (250)
T 2a7k_A 169 CVDYRLVNQVVESSALLDAAITQAHVMASY 198 (250)
T ss_dssp HHHHTCCSEEECHHHHHHHHHHHHHHHHTS
T ss_pred HHHcCCcceecCHHHHHHHHHHHHHHHHcC
Confidence 999999999999989999988888887654
No 50
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=99.53 E-value=1.7e-13 Score=124.72 Aligned_cols=161 Identities=15% Similarity=0.204 Sum_probs=121.2
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhc----h-HhHHH-HHHHHHHHHH
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEG----L-LSLMQ-MAKTTAILTK 190 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg----~-~~l~~-~~~~~~a~~~ 190 (286)
.|+++..|.--..++++.+..+.+.++++.+. +..+.+|+|..+| |+++.+- . ..... ...+...+.+
T Consensus 35 ~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (286)
T 3myb_A 35 GVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLA 114 (286)
T ss_dssp SEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHHHHHHHHHHHHHHHHH
Confidence 36666666666779999999999999999876 5679999999876 5666441 1 11111 1222334556
Q ss_pred HhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh----------hhhhhhcc------CCCCCCCHHH
Q psy5220 191 LSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV----------IKNTVKEK------LPDGFQSSEF 254 (286)
Q Consensus 191 l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v----------i~~~~g~~------l~~~~~~A~~ 254 (286)
+...++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.
T Consensus 115 l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~lGl~~~g~~~~L~r~vG~~~A~~llltG~~i~A~e 193 (286)
T 3myb_A 115 IQRLPAPVIARVHGIATAAGC-QLVAMCDLAVATRDARFAVSGINVGLFCSTPGVALSRNVGRKAAFEMLVTGEFVSADD 193 (286)
T ss_dssp HHHSSSCEEEEECSCEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCHHHHHHHTTTSCHHHHHHHHHHCCCEEHHH
T ss_pred HHcCCCCEEEEECCeehHHHH-HHHHhCCEEEEcCCCEEECcccccCCCCchHHHHHHHHcCHHHHHHHHHcCCCCCHHH
Confidence 777899999999999999996 588899999999999998764432 22223322 3466688999
Q ss_pred HHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 255 LLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 255 ~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+++.|+||.|++++++.+.+.++++.+...
T Consensus 194 A~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 223 (286)
T 3myb_A 194 AKGLGLVNRVVAPKALDDEIEAMVSKIVAK 223 (286)
T ss_dssp HHHHTSCSEEECGGGHHHHHHHHHHHHHHS
T ss_pred HHHCCCCcEecCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998887654
No 51
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=99.53 E-value=1.9e-13 Score=122.63 Aligned_cols=164 Identities=13% Similarity=0.090 Sum_probs=120.8
Q ss_pred EcCeeEEEEEEc-CcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC-----CcchhhchH--------hHHHH-HH
Q psy5220 119 IMNLPLVVAVFE-FEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG-----GARMQEGLL--------SLMQM-AK 183 (286)
Q Consensus 119 i~G~~v~v~a~d-~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg-----Ga~i~Eg~~--------~l~~~-~~ 183 (286)
.+|. |+++..| ..-..++++.++.+.+.++++.+.+....+|+|..+| |+++.+-.. ....+ ..
T Consensus 11 ~~~~-v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 89 (261)
T 2gtr_A 11 KQDG-FTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA 89 (261)
T ss_dssp EETT-EEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSSCSCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EeCC-EEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCCCEEEEEecCCCccccccCchhhhhccccchhhHHHHHHHH
Confidence 3443 6666666 2334699999999999999999876666899998876 556654110 00111 11
Q ss_pred HHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CC
Q psy5220 184 TTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LP 246 (286)
Q Consensus 184 ~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~ 246 (286)
+...+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++
T Consensus 90 ~~~~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~lt 168 (261)
T 2gtr_A 90 IRNFVNTFIQFKKPIIVAVNGPAIGLGA-SILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLS 168 (261)
T ss_dssp HHHHHHHHHHCCSCEEEEECSCEETHHH-HTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCeEeeHHH-HHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHHHHHHHHHc
Confidence 2233456677899999999999999996 588899999999999999874432 33444432 34
Q ss_pred CCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 247 DGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 247 ~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+..+|+.+++.|+||.|++++++.+.+.++++.+...
T Consensus 169 g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 206 (261)
T 2gtr_A 169 GRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASC 206 (261)
T ss_dssp CCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhC
Confidence 66789999999999999999999999988888887654
No 52
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=99.52 E-value=1.8e-13 Score=127.13 Aligned_cols=164 Identities=14% Similarity=0.133 Sum_probs=122.2
Q ss_pred cCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH-----------------
Q psy5220 120 MNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL----------------- 176 (286)
Q Consensus 120 ~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~----------------- 176 (286)
+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-..
T Consensus 42 ~~~-Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 120 (333)
T 3njd_A 42 TDR-VARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLS 120 (333)
T ss_dssp ETT-EEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTTC
T ss_pred ECC-EEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccccccccccccc
Confidence 443 6666666655679999999999999999885 6789999999877 556644100
Q ss_pred -----------------hHHH-HHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh--
Q psy5220 177 -----------------SLMQ-MAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-- 236 (286)
Q Consensus 177 -----------------~l~~-~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-- 236 (286)
.... +......+..+.+.++|+|++|.|.|+|||. .++++||++||.++|+|++...++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~-~LalacD~rias~~a~f~~pe~~lG~ 199 (333)
T 3njd_A 121 GKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGT-DIALHADQVIAAADAKIGYPPMRVWG 199 (333)
T ss_dssp HHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHH-HHHTTSSEEEECTTCEEECGGGGTTC
T ss_pred ccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHH-HHHHhCCEEEECCCCeeechhhceec
Confidence 0001 1222223456667899999999999999996 588899999999999999875442
Q ss_pred ------hhhhhhcc------CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 237 ------IKNTVKEK------LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 237 ------i~~~~g~~------l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
+.+.+|.. ++.+..+|+.+++.|+||.|++++++.+.+.++.+.+...|
T Consensus 200 ~P~~g~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~ 260 (333)
T 3njd_A 200 VPAAGLWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMP 260 (333)
T ss_dssp CCTTCCHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSC
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCC
Confidence 23334432 55777899999999999999999999999999998887643
No 53
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=99.52 E-value=2.3e-13 Score=122.66 Aligned_cols=160 Identities=13% Similarity=0.104 Sum_probs=121.1
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhc--h-----H-hH-HHH-HHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEG--L-----L-SL-MQM-AKTTAI 187 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg--~-----~-~l-~~~-~~~~~a 187 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+- . . .. ..+ ......
T Consensus 13 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (269)
T 1nzy_A 13 VAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQM 92 (269)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHHHHHHHHHHHH
Confidence 6666666655679999999999999999885 5679999999865 6777541 1 1 00 111 112334
Q ss_pred HHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCC
Q psy5220 188 LTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQ 250 (286)
Q Consensus 188 ~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~ 250 (286)
+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..
T Consensus 93 ~~~l~~~~kPvIAav~G~a~GgG~-~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~ 171 (269)
T 1nzy_A 93 IHKIIRVKRPVLAAINGVAAGGGL-GISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTL 171 (269)
T ss_dssp HHHHHHCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCB
T ss_pred HHHHHhCCCCEEEEECCeeecHHH-HHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhHHHHHHHHHcCCCC
Confidence 556777899999999999999996 588899999999999998863221 34444532 346778
Q ss_pred CHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 251 SSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 251 ~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+|+.+.+.|+||.|++++++.+...++.+.+...
T Consensus 172 ~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 205 (269)
T 1nzy_A 172 YPEEAKDWGLVSRVYPKDEFREVAWKVARELAAA 205 (269)
T ss_dssp CHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999989988888888877654
No 54
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=99.52 E-value=2.3e-13 Score=123.26 Aligned_cols=160 Identities=11% Similarity=0.120 Sum_probs=121.3
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH--------hHHHHHH-HHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL--------SLMQMAK-TTAIL 188 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~--------~l~~~~~-~~~a~ 188 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. ....+.+ +...+
T Consensus 27 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (279)
T 3g64_A 27 VATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVV 106 (279)
T ss_dssp EEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhHHHHHHHHHHHHH
Confidence 6677777655679999999999999999875 6689999999876 567644110 0111111 22345
Q ss_pred HHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeC-------hhh-----hhhhhhcc------CCCCCC
Q psy5220 189 TKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAG-------PRV-----IKNTVKEK------LPDGFQ 250 (286)
Q Consensus 189 ~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~g-------p~v-----i~~~~g~~------l~~~~~ 250 (286)
..+.+.++|+|++|.|.|+|||. .++++||++||.++|+|++.. |.. +.+.+|.. ++.+..
T Consensus 107 ~~l~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~~A~~l~ltg~~~ 185 (279)
T 3g64_A 107 RAVRECPFPVIAALHGVAAGAGA-VLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATRLLMLGDTV 185 (279)
T ss_dssp HHHHHSSSCEEEEECSEEETHHH-HHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred HHHHhCCCCEEEEEcCeeccccH-HHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHHHHHHHHHcCCCc
Confidence 56677899999999999999996 588899999999999998752 211 33344432 346678
Q ss_pred CHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 251 SSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 251 ~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+|+.+++.|+||.|++++++.+.+.++++.+...
T Consensus 186 ~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 219 (279)
T 3g64_A 186 RAPEAERIGLISELTEEGRADEAARTLARRLADG 219 (279)
T ss_dssp EHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTS
T ss_pred CHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998888754
No 55
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=99.52 E-value=2.7e-13 Score=121.93 Aligned_cols=163 Identities=13% Similarity=0.126 Sum_probs=122.4
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEe-CC-----Ccchhhch---HhHHHHHH-H-HH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITA-TG-----GARMQEGL---LSLMQMAK-T-TA 186 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~d-sg-----Ga~i~Eg~---~~l~~~~~-~-~~ 186 (286)
.+|. |+++..|.- ..++++..+.+.+.++++.+. +..+.+|+|.. .| |+++.+-. .....+.+ + ..
T Consensus 15 ~~~~-v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 92 (265)
T 2ppy_A 15 KEDG-IAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNE 92 (265)
T ss_dssp EETT-EEEEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHHHHHHH
T ss_pred eeCC-EEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhccchhHHHHHHHHHHH
Confidence 3443 666666666 789999999999999999876 56799999998 55 67775410 01111111 1 23
Q ss_pred HHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCc-EEEeeChhh-----------hhhhhhcc------CCCC
Q psy5220 187 ILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGA-LIGFAGPRV-----------IKNTVKEK------LPDG 248 (286)
Q Consensus 187 a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A-~i~~~gp~v-----------i~~~~g~~------l~~~ 248 (286)
.+..+.+.++|+|++|.|+|+|||. .++++||++||.++| +|++....+ +.+.+|.. ++.+
T Consensus 93 ~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~ 171 (265)
T 2ppy_A 93 TLDKIARSPQVYIACLEGHTVGGGL-EMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGE 171 (265)
T ss_dssp HHHHHHHSSSEEEEEECSEEETHHH-HHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHcCCCCEEEEECCEEeeHHH-HHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHhCC
Confidence 3456677899999999999999996 588899999999999 999864332 33444432 3466
Q ss_pred CCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 249 FQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 249 ~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
..+|+.+.+.|+||.|++++++.+...++++.+...
T Consensus 172 ~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 207 (265)
T 2ppy_A 172 TITPQEALEIGLVNRVFPQAETRERTREYARKLANS 207 (265)
T ss_dssp CBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTS
T ss_pred ccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999988888887654
No 56
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=99.52 E-value=3.3e-13 Score=121.97 Aligned_cols=161 Identities=13% Similarity=0.138 Sum_probs=121.6
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH---------------hHHHH
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL---------------SLMQM 181 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~---------------~l~~~ 181 (286)
.|+++..|.--..++++..+.+.+.++++.+. +..+.+|+|..+| |+++.+-.. .+..+
T Consensus 13 ~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (275)
T 1dci_A 13 HVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDL 92 (275)
T ss_dssp TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHH
T ss_pred CEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccchhhhhhHHHHHH
Confidence 37777777666679999999999999999886 5579999999865 667754110 00011
Q ss_pred -HHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhc-c----
Q psy5220 182 -AKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKE-K---- 244 (286)
Q Consensus 182 -~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~-~---- 244 (286)
..+...+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|. .
T Consensus 93 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~~A~~ 171 (275)
T 1dci_A 93 ISRYQKTFTVIEKCPKPVIAAIHGGCIGGGV-DLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNE 171 (275)
T ss_dssp HHHHHHHHHHHHHSSSCEEEEECSEEETHHH-HHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeeHHHH-HHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCcHHHHHH
Confidence 112223455667899999999999999996 588899999999999999874332 4445555 3
Q ss_pred --CCCCCCCHHHHHHcCccceEeCc-hhHHHHHHHHHHHHhcC
Q psy5220 245 --LPDGFQSSEFLLKKGALDMIIDR-RKLRFKIANLLALLQKK 284 (286)
Q Consensus 245 --l~~~~~~A~~~~~~G~vD~Vv~~-~e~~~~l~~~L~~l~~~ 284 (286)
++.+..+|+.+++.|+||.|+++ +++.+...++++.+...
T Consensus 172 l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~ 214 (275)
T 1dci_A 172 LTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSK 214 (275)
T ss_dssp HHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhC
Confidence 34667889999999999999999 88888888888877654
No 57
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=99.51 E-value=2.5e-13 Score=121.66 Aligned_cols=159 Identities=17% Similarity=0.223 Sum_probs=120.1
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch--Hh-HHHH-HHHHHHHHHHhc
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL--LS-LMQM-AKTTAILTKLSK 193 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~--~~-l~~~-~~~~~a~~~l~~ 193 (286)
|+++..|..-..++++..+.+.+.++++.+. +..+.+|+|...| |+++.+-. .. ...+ ... ..+..+.+
T Consensus 15 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~-~~~~~l~~ 93 (258)
T 2pbp_A 15 VGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQF-ADWDRLSI 93 (258)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTT-HHHHHHHT
T ss_pred EEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhHHHHHHH-HHHHHHHh
Confidence 6666666655679999999999999999875 5679999999864 67775410 00 0011 111 33456678
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|+|+|||. .++++||+++|.++|+|++....+ +.+.+|.. ++.+..+|+.+.
T Consensus 94 ~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~ 172 (258)
T 2pbp_A 94 VKTPMIAAVNGLALGGGF-ELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAE 172 (258)
T ss_dssp CCSCEEEEECSEEETHHH-HHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEEcCEEEhHHH-HHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHHHHHHHHcCCccCHHHHH
Confidence 899999999999999996 588899999999999999864432 33344432 346677899999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.|+||.|++++++.+...++++.+...
T Consensus 173 ~~GLv~~vv~~~~l~~~a~~~a~~la~~ 200 (258)
T 2pbp_A 173 QLGIVNRVVSPELLMEETMRLAGRLAEQ 200 (258)
T ss_dssp HTTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HcCCcceeeChHHHHHHHHHHHHHHHhC
Confidence 9999999999999999888888887654
No 58
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=99.51 E-value=1.2e-13 Score=128.24 Aligned_cols=161 Identities=14% Similarity=0.108 Sum_probs=121.7
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------------Ccchhhch-Hh-----------
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------------GARMQEGL-LS----------- 177 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------------Ga~i~Eg~-~~----------- 177 (286)
.|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|+..| |+++.+-. ..
T Consensus 66 gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~ 145 (334)
T 3t8b_A 66 ATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADT 145 (334)
T ss_dssp SEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC--------------
T ss_pred CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcccccccccccchh
Confidence 36777777666779999999999999999885 5679999999876 44664410 00
Q ss_pred ---HHH-HHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEc-CCcEEEeeChhh-----------hhhhh
Q psy5220 178 ---LMQ-MAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAE-PGALIGFAGPRV-----------IKNTV 241 (286)
Q Consensus 178 ---l~~-~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~-~~A~i~~~gp~v-----------i~~~~ 241 (286)
... ...+...+..+...++|+|++|.|.|+|||. .++++||++||. ++|+|++....+ +.+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~A~GgG~-~LalacD~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r~v 224 (334)
T 3t8b_A 146 VDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGH-SLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQV 224 (334)
T ss_dssp --------CCHHHHHHHHHHSSSEEEEEECSEEETHHH-HHHHHSSEEEEETTTCEEECCCTTCSSSSCCSCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccCcc-hhHhhCCEEEEeCCCcEEECcccccCCCCcccHHHHHHHHh
Confidence 000 0011223445667899999999999999995 688999999999 999999874332 44445
Q ss_pred hcc------CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 242 KEK------LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 242 g~~------l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
|.. ++.+..+|+.+++.|+||.|++++++.+.+.++++.+...
T Consensus 225 G~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~ 273 (334)
T 3t8b_A 225 GQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAK 273 (334)
T ss_dssp HHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhC
Confidence 543 3466789999999999999999999999999999888764
No 59
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=99.51 E-value=3.4e-13 Score=120.42 Aligned_cols=160 Identities=15% Similarity=0.193 Sum_probs=119.6
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch------H--hHHHHHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL------L--SLMQMAKTTAILT 189 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~------~--~l~~~~~~~~a~~ 189 (286)
|+++..|..-..++++..+.+.+.++++.+. +..+.+|+|..+| |+++.+-. . ...........+.
T Consensus 9 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (253)
T 1uiy_A 9 VAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFH 88 (253)
T ss_dssp EEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHHHHHHHHHHH
Confidence 6666666555679999999999999999885 5679999999865 67775411 0 0010011233455
Q ss_pred HHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh----------hhhhhhcc------CCCCCCCHH
Q psy5220 190 KLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV----------IKNTVKEK------LPDGFQSSE 253 (286)
Q Consensus 190 ~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v----------i~~~~g~~------l~~~~~~A~ 253 (286)
.+.+.++|+|++|.|+|+|||. .++++||+++|.++|+|++....+ +.+.+|.. ++.+..+|+
T Consensus 89 ~i~~~~kPvIAav~G~a~GgG~-~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~l~r~vG~~~a~~l~ltg~~~~a~ 167 (253)
T 1uiy_A 89 RVYTYPKPTVAAVNGPAVAGGA-GLALACDLVVMDEEARLGYTEVKIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAR 167 (253)
T ss_dssp HHHHCSSCEEEEECSCEETHHH-HHHHTSSEEEEETTCEEECCHHHHTCCCHHHHHHHHHHSCHHHHHHHHHHCCEEEHH
T ss_pred HHHhCCCCEEEEECCeeeHHHH-HHHHhCCEEEEcCCcEEeCcccccCcCCchHHHHHHHHhCHHHHHHHHHhCCccCHH
Confidence 6777899999999999999996 588899999999999999863221 23333432 346678899
Q ss_pred HHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 254 FLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 254 ~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+.+.|+||.|++++++.+.+.++++.+...
T Consensus 168 eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 198 (253)
T 1uiy_A 168 EAKALGLVNRIAPPGKALEEAKALAEEVAKN 198 (253)
T ss_dssp HHHHHTSCSEEECTTCHHHHHHHHHHHHHHS
T ss_pred HHHHCCCcceecChhHHHHHHHHHHHHHHcC
Confidence 9999999999999989888888888877654
No 60
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=99.50 E-value=4.4e-13 Score=120.71 Aligned_cols=158 Identities=11% Similarity=0.100 Sum_probs=118.2
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch---H-h---HHHHHHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL---L-S---LMQMAKTTAILTK 190 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~---~-~---l~~~~~~~~a~~~ 190 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-. . . ..........+..
T Consensus 15 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (266)
T 3fdu_A 15 VLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKS 94 (266)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGGGSHHHHHHHH
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 6666666655679999999999999999875 5679999999876 56664411 0 0 0001122234556
Q ss_pred HhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHH
Q psy5220 191 LSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSE 253 (286)
Q Consensus 191 l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~ 253 (286)
+.+.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+
T Consensus 95 l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~i~A~ 173 (266)
T 3fdu_A 95 AARLSKPLIIAVKGVAIGIGV-TILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAE 173 (266)
T ss_dssp HHHCCSCEEEEECSEEETHHH-HGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCEECHH
T ss_pred HHhCCCCEEEEECCEEehHHH-HHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhCHHHHHHHHHhCCCcCHH
Confidence 677899999999999999996 588999999999999999874332 34444443 346678999
Q ss_pred HHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 254 FLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 254 ~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+.+.|+||.|++ ++.+...++.+.+...
T Consensus 174 eA~~~GLv~~vv~--~l~~~a~~~a~~la~~ 202 (266)
T 3fdu_A 174 TALQAGLVNEIVE--DAYATAQATAQHLTAL 202 (266)
T ss_dssp HHHHTTSCSEECS--CHHHHHHHHHHHHHTS
T ss_pred HHHHCCCHHHHHH--HHHHHHHHHHHHHHhC
Confidence 9999999999998 7888888888877654
No 61
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=99.50 E-value=2.9e-13 Score=123.22 Aligned_cols=164 Identities=12% Similarity=0.160 Sum_probs=122.9
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch-----HhHHHH-HHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL-----LSLMQM-AKTTA 186 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~-----~~l~~~-~~~~~ 186 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-. .....+ .....
T Consensus 39 ~~~~-V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 117 (287)
T 2vx2_A 39 QLDG-IRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSK 117 (287)
T ss_dssp EETT-EEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHHHHHHHH
T ss_pred EECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHHHHH
Confidence 3443 6777777666679999999999999999875 5679999999865 67775411 001111 22233
Q ss_pred HHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh----------hhhhhhcc------CCCCCC
Q psy5220 187 ILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV----------IKNTVKEK------LPDGFQ 250 (286)
Q Consensus 187 a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v----------i~~~~g~~------l~~~~~ 250 (286)
.+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..
T Consensus 118 ~~~~l~~~~kPvIAav~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~L~r~vG~~~A~~llltg~~i 196 (287)
T 2vx2_A 118 VMMHIRNHPVPVIAMVNGLATAAGC-QLVASCDIAVASDKSSFATPGVNVGLFCSTPGVALARAVPRKVALEMLFTGEPI 196 (287)
T ss_dssp HHHHHHTCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHHHHTTSCHHHHHHHHHHCCCE
T ss_pred HHHHHHhCCCCEEEEECCEEEcHHH-HHHHhCCEEEEcCCCEEECchhhhCCCCchHHHHHHHHhhHHHHHHHHHhCCCC
Confidence 4556778899999999999999995 588899999999999999874432 22333422 346678
Q ss_pred CHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 251 SSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 251 ~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+|+.+.+.|+||.|++++++.+.+.++.+.+...
T Consensus 197 ~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 230 (287)
T 2vx2_A 197 SAQEALLHGLLSKVVPEAELQEETMRIARKIASL 230 (287)
T ss_dssp EHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999999988887654
No 62
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=99.50 E-value=3.7e-13 Score=122.67 Aligned_cols=160 Identities=16% Similarity=0.147 Sum_probs=117.7
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhc-----hH------hHHH-HHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEG-----LL------SLMQ-MAKTT 185 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg-----~~------~l~~-~~~~~ 185 (286)
|+++..|.--..++++.+..+.+.++++.+. +..+.+|+|..+| |+++.+- .. .... ...+.
T Consensus 34 va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (290)
T 3sll_A 34 IALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLD 113 (290)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhHHHHHHHHHH
Confidence 5666666555679999999999999999886 5679999999876 5566431 00 0111 12223
Q ss_pred HHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh------------hhhhhhcc------CCC
Q psy5220 186 AILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV------------IKNTVKEK------LPD 247 (286)
Q Consensus 186 ~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v------------i~~~~g~~------l~~ 247 (286)
..+.++.+.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.
T Consensus 114 ~~~~~l~~~~kPvIAav~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG~~~A~~llltG 192 (290)
T 3sll_A 114 EVILTLRRMHQPVIAAINGAAIGGGL-CLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTG 192 (290)
T ss_dssp HHHHHHHHCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCEEEEECCeehHHHH-HHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhCHHHHHHHHHcC
Confidence 34556677899999999999999995 588899999999999998763321 33334432 346
Q ss_pred CCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 248 GFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 248 ~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+..+|+.+.+.|+||.|++++++.+...++++.+...
T Consensus 193 ~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~ 229 (290)
T 3sll_A 193 RDVDADEAERIGLVSRKVASESLLEECYAIGERIAGF 229 (290)
T ss_dssp CCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcC
Confidence 6789999999999999999999999999998888654
No 63
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=99.50 E-value=1.8e-13 Score=124.78 Aligned_cols=161 Identities=14% Similarity=0.202 Sum_probs=120.6
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------CcchhhchH-h----HHH--HHHHHHHH
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGLL-S----LMQ--MAKTTAIL 188 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~~-~----l~~--~~~~~~a~ 188 (286)
.|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|+.+| |+++.+-.. . ... .......+
T Consensus 37 ~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 116 (289)
T 3t89_A 37 GIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQ 116 (289)
T ss_dssp SEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC----------------CTHHHHH
T ss_pred CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccchhhhHHHHHHHHHHH
Confidence 47777777666679999999999999999885 6679999999876 566643100 0 000 00112234
Q ss_pred HHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCC
Q psy5220 189 TKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQS 251 (286)
Q Consensus 189 ~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~ 251 (286)
..+.+.++|+|++|.|.|+|||. .++++||++||.++|+|++..+.+ +.+.+|.. ++.+..+
T Consensus 117 ~~l~~~~kPvIAaV~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~~~A~~llltG~~i~ 195 (289)
T 3t89_A 117 RQIRTCPKPVVAMVAGYSIGGGH-VLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYD 195 (289)
T ss_dssp HHHHHCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCCCEE
T ss_pred HHHHcCCCCEEEEECCEeehHHH-HHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCHHHHHHHHHcCCccc
Confidence 45667899999999999999995 588899999999999999863221 33444432 3466788
Q ss_pred HHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 252 SEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 252 A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
|+.+.+.|+||.|++++++.+.+.++++.+...
T Consensus 196 A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~ 228 (289)
T 3t89_A 196 AKQALDMGLVNTVVPLADLEKETVRWCREMLQN 228 (289)
T ss_dssp HHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999888764
No 64
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=99.50 E-value=1.3e-13 Score=126.28 Aligned_cols=165 Identities=14% Similarity=0.109 Sum_probs=120.0
Q ss_pred EEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH--hH----------H
Q psy5220 118 SIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL--SL----------M 179 (286)
Q Consensus 118 ~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~--~l----------~ 179 (286)
..+|..|+++..|.--..++++.+..+.+.++++.+. +..+.+|+|...| |+++.+-.. .. .
T Consensus 34 ~~~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~ 113 (298)
T 3qre_A 34 EATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDAN 113 (298)
T ss_dssp EECTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC----------------------
T ss_pred EEeCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhccccccccccchhHH
Confidence 3455457888887766779999999999999999875 5679999999877 556644110 00 0
Q ss_pred HHHHH-HHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc---
Q psy5220 180 QMAKT-TAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK--- 244 (286)
Q Consensus 180 ~~~~~-~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~--- 244 (286)
.+... ...+..+...++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|..
T Consensus 114 ~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ 192 (298)
T 3qre_A 114 LADLVGERPPHFVTMLRKPVIAAINGPCVGIGL-TQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVAL 192 (298)
T ss_dssp -------CCTTGGGGSSSCEEEEECSCEETHHH-HHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCceeecch-HHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHhcCHHHHH
Confidence 00111 112345667899999999999999995 588899999999999999975442 33344432
Q ss_pred ---CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhc
Q psy5220 245 ---LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 245 ---l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
++.+..+|+.+.+.|+||.|++++++.+...++++.+..
T Consensus 193 ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~ 234 (298)
T 3qre_A 193 DLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIAR 234 (298)
T ss_dssp HHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHc
Confidence 346678899999999999999999999888888887764
No 65
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=99.49 E-value=5e-13 Score=121.14 Aligned_cols=162 Identities=11% Similarity=0.135 Sum_probs=120.5
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch--------Hh-HHH-HHHHHH
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL--------LS-LMQ-MAKTTA 186 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~--------~~-l~~-~~~~~~ 186 (286)
.|+++..|.--..++++.+..+.+.++++.+. +..+.+|+|...| |+++.+-. .. ... ...+..
T Consensus 29 ~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (279)
T 3t3w_A 29 RIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLE 108 (279)
T ss_dssp TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCHHHHHHHHHHHTHH
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccchHHHHHHHHHHHHH
Confidence 36777777666779999999999999999875 5679999999876 55664310 00 000 112222
Q ss_pred HHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh---------hhhhhhcc------CCCCCCC
Q psy5220 187 ILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV---------IKNTVKEK------LPDGFQS 251 (286)
Q Consensus 187 a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v---------i~~~~g~~------l~~~~~~ 251 (286)
.+.++.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ ..+.+|.. ++.+..+
T Consensus 109 ~~~~l~~~~kPvIAav~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~~Gl~~~~~~~~~~~vG~~~A~~llltG~~i~ 187 (279)
T 3t3w_A 109 YSLRWRNVPKPSIAAVQGRCISGGL-LLCWPCDLIIAAEDALFSDPVVLMDIGGVEYHGHTWELGPRKAKEILFTGRAMT 187 (279)
T ss_dssp HHHHHHHCSSCEEEEECSEEEGGGH-HHHTTSSEEEEETTCEEECCGGGGTCSSCSSCCHHHHHCHHHHHHHHHHCCCEE
T ss_pred HHHHHHhCCCCEEEEECCeEhHHHH-HHHHhCCEEEecCCCEEeCcHHhcCCCCchHHHHHhhcCHHHHHHHHHcCCccC
Confidence 3456677899999999999999995 588899999999999998863221 12333332 3466778
Q ss_pred HHHHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 252 SEFLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 252 A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
|+.+.+.|+||.|++++++.+.+.++.+.+...|
T Consensus 188 A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~ 221 (279)
T 3t3w_A 188 AEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMP 221 (279)
T ss_dssp HHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred HHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999998887643
No 66
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=99.49 E-value=1.4e-13 Score=124.50 Aligned_cols=161 Identities=14% Similarity=0.148 Sum_probs=119.1
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEe-----CC------CcchhhchH-hH---HHH--HHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITA-----TG------GARMQEGLL-SL---MQM--AKTT 185 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~d-----sg------Ga~i~Eg~~-~l---~~~--~~~~ 185 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|+. .| |+++.+-.. .. ... ....
T Consensus 20 va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 99 (275)
T 4eml_A 20 IAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVL 99 (275)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC--------------CCCHH
T ss_pred EEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccccchhhHHHHHHH
Confidence 6666666655679999999999999999875 66799999998 55 556643110 00 000 0112
Q ss_pred HHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChh-----------hhhhhhhcc------CCCC
Q psy5220 186 AILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPR-----------VIKNTVKEK------LPDG 248 (286)
Q Consensus 186 ~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~-----------vi~~~~g~~------l~~~ 248 (286)
..+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++.... .+.+.+|.. ++.+
T Consensus 100 ~~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG~~~A~~llltg~ 178 (275)
T 4eml_A 100 DLQRLIRSMPKVVIALVAGYAIGGGH-VLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCR 178 (275)
T ss_dssp HHHHHHHHSSSEEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCEEEEECCeeehHHH-HHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhHHHHHHHHHHhCC
Confidence 23445667899999999999999996 58899999999999999986222 133444432 3466
Q ss_pred CCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcCC
Q psy5220 249 FQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKKS 285 (286)
Q Consensus 249 ~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~~ 285 (286)
..+|+.+.+.|+||.|++++++.+.+.++++.+...+
T Consensus 179 ~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~ 215 (275)
T 4eml_A 179 QYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKS 215 (275)
T ss_dssp CEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred CcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCC
Confidence 7899999999999999999999999999998887643
No 67
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=99.49 E-value=1e-13 Score=124.31 Aligned_cols=156 Identities=16% Similarity=0.207 Sum_probs=118.2
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHhHHHHHHHHHHHHHHhcCCCC
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLSLMQMAKTTAILTKLSKKKIP 197 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~l~~~~~~~~a~~~l~~~~vP 197 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-.. ...+.. ....+.+.++|
T Consensus 19 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~-~~~~~~---~~~~l~~~~kP 94 (256)
T 3pe8_A 19 VRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGD-TTELPD---ISPKWPDMTKP 94 (256)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-------------CCCCCCCSSC
T ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhh-hHHHHH---HHHHHHhCCCC
Confidence 6666666665679999999999999999875 6779999999876 556654211 011111 12446678999
Q ss_pred EEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHHHcCc
Q psy5220 198 FISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLLKKGA 260 (286)
Q Consensus 198 ~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~~~G~ 260 (286)
+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.+++.|+
T Consensus 95 vIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~GL 173 (256)
T 3pe8_A 95 VIGAINGAAVTGGL-ELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGL 173 (256)
T ss_dssp EEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTS
T ss_pred EEEEECCeeechHH-HHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHCCC
Confidence 99999999999996 588899999999999998763221 34444432 3466788999999999
Q ss_pred cceEeCchhHHHHHHHHHHHHhcC
Q psy5220 261 LDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 261 vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
||.|++++++.+...++.+.+...
T Consensus 174 v~~vv~~~~l~~~a~~~a~~la~~ 197 (256)
T 3pe8_A 174 VTEVVAHDDLLTAARRVAASIVGN 197 (256)
T ss_dssp CSCEECGGGHHHHHHHHHHHHHTS
T ss_pred CeEEeCHhHHHHHHHHHHHHHHcC
Confidence 999999999999999999888754
No 68
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=99.49 E-value=5e-13 Score=121.04 Aligned_cols=162 Identities=13% Similarity=0.063 Sum_probs=119.2
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH------hHHH-HHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL------SLMQ-MAKTT 185 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~------~l~~-~~~~~ 185 (286)
.+|. |+++..|.--..++++.+..+.+.++++.+. +..+.+|+|...| |+++.+-.. .... +....
T Consensus 34 ~~~~-v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 112 (276)
T 3rrv_A 34 ADGA-LRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKTIRDGR 112 (276)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHHHHHHHH
Confidence 3443 6666666666779999999999999999875 5679999999876 566644110 0111 12223
Q ss_pred HHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCC
Q psy5220 186 AILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDG 248 (286)
Q Consensus 186 ~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~ 248 (286)
..+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|+++...+ +.+.+|.. ++.+
T Consensus 113 ~~~~~l~~~~kPvIAav~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ellltG~ 191 (276)
T 3rrv_A 113 EIVLGMARCRIPVVAAVNGPAVGLGC-SLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGT 191 (276)
T ss_dssp HHHHHHHHCSSCEEEEECSCEETHHH-HHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCEEEEECceeeHHHH-HHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHHHHHcCC
Confidence 34556777899999999999999996 588899999999999999763321 33344432 3466
Q ss_pred CCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 249 FQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 249 ~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
..+|+.+++.|+||.|+ +++.+.+.++++.+...
T Consensus 192 ~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~ 225 (276)
T 3rrv_A 192 RISAQRAVELGLANHVA--DDPVAEAIACAKKILEL 225 (276)
T ss_dssp CEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcC
Confidence 78899999999999999 77777777777777653
No 69
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=99.49 E-value=4.4e-13 Score=120.49 Aligned_cols=162 Identities=14% Similarity=0.097 Sum_probs=119.4
Q ss_pred cCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchh--hc---h-HhHHHH-HHHHH
Q psy5220 120 MNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQ--EG---L-LSLMQM-AKTTA 186 (286)
Q Consensus 120 ~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~--Eg---~-~~l~~~-~~~~~ 186 (286)
+|. |+++..|.-- .++++.++.+.+.++++.+. +..+.+|+|...| |+++. +. . .....+ .....
T Consensus 18 ~~~-v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 95 (264)
T 1wz8_A 18 RPG-VLEITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARD 95 (264)
T ss_dssp ETT-EEEEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cCC-EEEEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccccccccccchHHHHHHHHHHHH
Confidence 443 5555555444 89999999999999999885 5679999999854 67774 10 0 000011 11223
Q ss_pred HHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCC
Q psy5220 187 ILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGF 249 (286)
Q Consensus 187 a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~ 249 (286)
.+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+.
T Consensus 96 ~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~ 174 (264)
T 1wz8_A 96 LVLGPLNFPRPVVAAVEKVAVGAGL-ALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEP 174 (264)
T ss_dssp HHHHHHHSSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCCEEEEECCeeechhH-HHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHHHHHHcCCC
Confidence 3556677899999999999999996 588899999999999999863221 33444432 34667
Q ss_pred CCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 250 QSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 250 ~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+|+.+.+.|+||.|++++++.+...++++.+...
T Consensus 175 ~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 209 (264)
T 1wz8_A 175 LTGEEAERLGLVALAVEDEKVYEKALEVAERLAQG 209 (264)
T ss_dssp EEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999988887654
No 70
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=99.48 E-value=3.3e-13 Score=122.12 Aligned_cols=164 Identities=15% Similarity=0.159 Sum_probs=121.4
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH-------h-HHHHHH-
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL-------S-LMQMAK- 183 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~-------~-l~~~~~- 183 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. . ...+.+
T Consensus 15 ~~~~-v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 93 (276)
T 2j5i_A 15 IEDG-IAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRRE 93 (276)
T ss_dssp EETE-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHHHHHH
T ss_pred EeCC-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHHHHHHHHH
Confidence 3443 6677777655679999999999999999886 5578999999865 667754110 0 011111
Q ss_pred HHHH-HHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------C
Q psy5220 184 TTAI-LTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------L 245 (286)
Q Consensus 184 ~~~a-~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l 245 (286)
.... +..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++...++ +.+.+|.. +
T Consensus 94 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 172 (276)
T 2j5i_A 94 ASQWQWKLLRMYAKPTIAMVNGWCFGGGF-SPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIM 172 (276)
T ss_dssp HHHHHTTTTTTCSSCEEEEECSCEEGGGH-HHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECCeeehhHH-HHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHH
Confidence 1111 345677899999999999999995 588899999999999999863322 33344432 3
Q ss_pred CCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 246 PDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 246 ~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+..+|+.+++.|+||.|++++++.+.+.++++.+...
T Consensus 173 tg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 211 (276)
T 2j5i_A 173 TGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEK 211 (276)
T ss_dssp HCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTS
T ss_pred hCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhC
Confidence 466788999999999999999999999999998887654
No 71
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=99.48 E-value=1.3e-13 Score=123.79 Aligned_cols=160 Identities=16% Similarity=0.202 Sum_probs=118.1
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEe-CC------CcchhhchH----hHHHHHHHHHHHHHHh
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITA-TG------GARMQEGLL----SLMQMAKTTAILTKLS 192 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~d-sg------Ga~i~Eg~~----~l~~~~~~~~a~~~l~ 192 (286)
|+++..|.--..++++.++.+.+.++++.+.+..+.+|+|.. .| |+++.+-.. .......+...+..+.
T Consensus 14 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~ 93 (261)
T 1ef8_A 14 VAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQ 93 (261)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHH
T ss_pred EEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCceEEEEECCCCCCeeecCcChHhhhccCchhHHHHHHHHHHHHHHH
Confidence 666777665567999999999999999988543399999998 66 677754110 0000011223345566
Q ss_pred cCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHH
Q psy5220 193 KKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFL 255 (286)
Q Consensus 193 ~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~ 255 (286)
+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.+
T Consensus 94 ~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA 172 (261)
T 1ef8_A 94 KFPKPIISMVEGSVWGGAF-EMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRA 172 (261)
T ss_dssp HCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHH
T ss_pred hCCCCEEEEECCEEEeHhH-HHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHH
Confidence 7899999999999999996 588899999999999998863321 22223322 34566789999
Q ss_pred HHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 256 LKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 256 ~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
++.|+||.|++++++.+.+.++++.+...
T Consensus 173 ~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 201 (261)
T 1ef8_A 173 LAVGILNHVVEVEELEDFTLQMAHHISEK 201 (261)
T ss_dssp HHTTSCSEEECHHHHHHHHHHHHHHHTTS
T ss_pred HHCCCcccccCHHHHHHHHHHHHHHHHhC
Confidence 99999999999889999999888887654
No 72
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=99.48 E-value=2.1e-13 Score=122.83 Aligned_cols=157 Identities=14% Similarity=0.210 Sum_probs=111.0
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC-----CcchhhchHhHHHHHHHHHHHHHHhc
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG-----GARMQEGLLSLMQMAKTTAILTKLSK 193 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg-----Ga~i~Eg~~~l~~~~~~~~a~~~l~~ 193 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+.+..+.+|+|...| |+++.+..........+...+..+.+
T Consensus 27 ~~~~-v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~l~~ 105 (264)
T 3he2_A 27 QAEA-VLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAMDA 105 (264)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHCC---CCSEEEEEESSSCSBCCBCCTTCTTGGGHHHHHHHHHHHHHH
T ss_pred EECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCceEEEEECCCCCccCCcCCccchhhHHHHHHHHHHHHHHHh
Confidence 3443 66666665556799999999999999998765599999999876 56775311110111222334556667
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|.|+|||. .++++||++||.++|+|+++..++ +.+.+|.. ++.+..+|+.+.
T Consensus 106 ~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~ 184 (264)
T 3he2_A 106 SPMPVVGAINGPAIGAGL-QLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIAL 184 (264)
T ss_dssp CSSCEEEEECSCEETHHH-HHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECCcEEcchh-HHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHHHHHcCCCccHHHHH
Confidence 899999999999999995 588899999999999998763221 33344432 346778999999
Q ss_pred HcCccceEeCchhHHHHHHHH
Q psy5220 257 KKGALDMIIDRRKLRFKIANL 277 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~ 277 (286)
+.|+||.|++.+++.+.+.++
T Consensus 185 ~~GLV~~v~~~~~a~~~A~~l 205 (264)
T 3he2_A 185 HTGMANRIGTLADAQAWAAEI 205 (264)
T ss_dssp HHTSCSEECCHHHHHHHHHHH
T ss_pred HCCCeEEEecHHHHHHHHHHH
Confidence 999999999755555544444
No 73
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=99.48 E-value=2.7e-13 Score=123.48 Aligned_cols=163 Identities=12% Similarity=0.090 Sum_probs=119.7
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------CcchhhchH-h-H-------HH-H
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGLL-S-L-------MQ-M 181 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~~-~-l-------~~-~ 181 (286)
.+|.-..|.-|.+. .++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-.. . . .. .
T Consensus 15 ~~~~va~itlnrP~--~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~ 92 (287)
T 3gkb_A 15 SEHGVARIILDNPP--VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADV 92 (287)
T ss_dssp EETTEEEEEECCTT--TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHHTSCTTC
T ss_pred EECCEEEEEECCCC--CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhHHHHHHH
Confidence 34543334444444 49999999999999999886 5679999998865 456654110 0 0 00 0
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcC-CcEEEeeChhh-----------hhhhhhcc-----
Q psy5220 182 AKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEP-GALIGFAGPRV-----------IKNTVKEK----- 244 (286)
Q Consensus 182 ~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~-~A~i~~~gp~v-----------i~~~~g~~----- 244 (286)
..+...+..+.+.++|+|++|.|+|+|||. .++++||++||.+ +|+|+++...+ +.+.+|..
T Consensus 93 ~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~-~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~el 171 (287)
T 3gkb_A 93 NVFQAVGELIRHQPQVTIVKLAGKARGGGA-EFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEV 171 (287)
T ss_dssp CTTHHHHHHHHHCSSEEEEEECSEEETHHH-HHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeeehHHH-HHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCHHHHHHH
Confidence 111223455667899999999999999995 5888999999999 99999863322 44445533
Q ss_pred -CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 245 -LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 245 -l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
++.+..+|+.+.+.|+||.|++++++.+.+.++.+.+...
T Consensus 172 lltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~ 212 (287)
T 3gkb_A 172 VLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAAL 212 (287)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTS
T ss_pred HHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcC
Confidence 4467789999999999999999999999999999888764
No 74
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=99.48 E-value=3.3e-13 Score=121.43 Aligned_cols=160 Identities=14% Similarity=0.167 Sum_probs=117.1
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHh-HHHHHH-HHH-HHHHH-h-
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLS-LMQMAK-TTA-ILTKL-S- 192 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~-l~~~~~-~~~-a~~~l-~- 192 (286)
|+++..|.--..++++.+..+.+.++++.+. +..+.+|+|..+| |+++..+... ...+.+ ... .+..+ .
T Consensus 19 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (265)
T 3rsi_A 19 VVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLS 98 (265)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC--------------CCCHHHHHHHTTSS
T ss_pred EEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCCcccccchHHHHHHhHHHHHHHHHHh
Confidence 6777777666779999999999999999875 5679999999877 4566411000 001110 011 34556 6
Q ss_pred -cCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHH
Q psy5220 193 -KKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEF 254 (286)
Q Consensus 193 -~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~ 254 (286)
+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.
T Consensus 99 ~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e 177 (265)
T 3rsi_A 99 HTLTKPLIAAVNGACLGGGC-EMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFE 177 (265)
T ss_dssp CCCSSCEEEEECSCEETHHH-HHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHHH
T ss_pred cCCCCCEEEEECCeeeHHHH-HHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence 7899999999999999996 588899999999999999863332 33334432 3466778999
Q ss_pred HHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 255 LLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 255 ~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+++.|+||.|++++++.+...++++.+...
T Consensus 178 A~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 207 (265)
T 3rsi_A 178 AYHFGLVGHVVPAGTALDKARSLADRIVRN 207 (265)
T ss_dssp HHHTTSCSEEESTTCHHHHHHHHHHHHHTS
T ss_pred HHHCCCccEecChhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998888764
No 75
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=99.48 E-value=8.3e-13 Score=123.59 Aligned_cols=168 Identities=11% Similarity=0.115 Sum_probs=122.9
Q ss_pred CCCcEEEEEEEEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------Ccchhhch-----
Q psy5220 108 ETDALIVIKGSIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGL----- 175 (286)
Q Consensus 108 ~~~~vvtG~g~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~----- 175 (286)
..+.|+. .++|. |+++..|.--..++++..+.+.+.++++.+. +..+.+|+|+.+| |+++.+-.
T Consensus 7 ~~e~vl~---e~~~~-Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~ 82 (353)
T 4hdt_A 7 KNEDVLV---NVEGG-VGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKA 82 (353)
T ss_dssp -CCSEEE---EEETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHT
T ss_pred CCCcEEE---EEECC-EEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccch
Confidence 3556664 46674 6666666555669999999999999999875 6779999999876 45664310
Q ss_pred --HhHHH-HHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhh
Q psy5220 176 --LSLMQ-MAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTV 241 (286)
Q Consensus 176 --~~l~~-~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~ 241 (286)
..... .......+..+.+.++|+|++|.|.|+|||. .++++||++||.++|+|+++...+ +.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~-~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~ 161 (353)
T 4hdt_A 83 DGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGV-GVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAP 161 (353)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHH-HHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCEEEEeECceeecCc-cccCCcCeeccchhccccCcccccccCCCccceehhhhhh
Confidence 00111 1223334556677899999999999999995 588899999999999999874332 33333
Q ss_pred hcc-----CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHH
Q psy5220 242 KEK-----LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLAL 280 (286)
Q Consensus 242 g~~-----l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~ 280 (286)
|.. ++.+..+|+.+++.|+||.||+++++.+..++++..
T Consensus 162 g~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~ 205 (353)
T 4hdt_A 162 GKLGLHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIAD 205 (353)
T ss_dssp TTHHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHH
T ss_pred hHHHHHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHh
Confidence 321 446678999999999999999999988888777654
No 76
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=99.48 E-value=3.5e-13 Score=122.82 Aligned_cols=163 Identities=14% Similarity=0.081 Sum_probs=119.8
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------CcchhhchH-hHH------H-HHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGLL-SLM------Q-MAK 183 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~~-~l~------~-~~~ 183 (286)
.+|.-..|.-|.+. .++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. ... . ...
T Consensus 14 ~~~~Va~itlnrP~--~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~~~~~~~ 91 (289)
T 3h0u_A 14 LDGTVLSATFNAPP--MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDAS 91 (289)
T ss_dssp EETTEEEEEECCTT--TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCS
T ss_pred EECCEEEEEECCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhHHHHHHH
Confidence 34443344444444 59999999999999999875 5679999998765 447644111 000 0 011
Q ss_pred HHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCC-cEEEeeChhh-----------hhhhhhcc------C
Q psy5220 184 TTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPG-ALIGFAGPRV-----------IKNTVKEK------L 245 (286)
Q Consensus 184 ~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~-A~i~~~gp~v-----------i~~~~g~~------l 245 (286)
+...+.++.+.++|+|++|.|+|+|||. .++++||++||.++ |+|+++...+ +.+.+|.. +
T Consensus 92 ~~~~~~~l~~~~kPvIAaV~G~a~GgG~-~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~elll 170 (289)
T 3h0u_A 92 LGMLFRKLSQLPAVTIAKLRGRARGAGS-EFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVL 170 (289)
T ss_dssp HHHHHHHHHTCSSEEEEEECSEEETHHH-HHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCEeehhhH-HHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 2234556778899999999999999995 58889999999999 9999863221 34445533 3
Q ss_pred CCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 246 PDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 246 ~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+..+|+.+.+.|+||.|++++++.+.+.++.+.+...
T Consensus 171 tG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~ 209 (289)
T 3h0u_A 171 TSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGF 209 (289)
T ss_dssp HCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTS
T ss_pred cCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhC
Confidence 466789999999999999999999999999998888754
No 77
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=99.48 E-value=1.9e-13 Score=122.68 Aligned_cols=161 Identities=16% Similarity=0.123 Sum_probs=119.9
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH--hHHHH-HHHHHHHHHHhc
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL--SLMQM-AKTTAILTKLSK 193 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~--~l~~~-~~~~~a~~~l~~ 193 (286)
.|+++..|.--..++++..+.+.+.++++.+. +.++.+|+|..+| |+++.+-.. ..... ......+..+.+
T Consensus 16 ~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (260)
T 1mj3_A 16 SVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITR 95 (260)
T ss_dssp CEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGG
T ss_pred CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchHHHHHHHHHHHHHHHh
Confidence 36666676655679999999999999999875 5679999998865 677755110 00001 111112445677
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.+.
T Consensus 96 ~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~ 174 (260)
T 1mj3_A 96 IKKPVIAAVNGYALGGGC-ELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAK 174 (260)
T ss_dssp CSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECCEEEeHHH-HHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHH
Confidence 899999999999999996 588899999999999999864432 33444432 346677899999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.|+||.|++++++.+...++++.+...
T Consensus 175 ~~GLv~~vv~~~~l~~~a~~~a~~la~~ 202 (260)
T 1mj3_A 175 QAGLVSKIFPVETLVEEAIQCAEKIANN 202 (260)
T ss_dssp HHTSCSEEECTTTHHHHHHHHHHHHHHS
T ss_pred HcCCccEEeChHHHHHHHHHHHHHHHcC
Confidence 9999999999999988888888877653
No 78
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=99.47 E-value=1.1e-13 Score=124.09 Aligned_cols=164 Identities=9% Similarity=0.037 Sum_probs=122.1
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHh-H---HHH-HHHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLS-L---MQM-AKTTAI 187 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~-l---~~~-~~~~~a 187 (286)
.+|. |+++..|..-..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-... . ..+ ......
T Consensus 18 ~~~~-v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 96 (258)
T 3lao_A 18 QRGH-LFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDP 96 (258)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBCCCCTTCCCT
T ss_pred EECC-EEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhhHHHHHHHHHH
Confidence 3443 6666666665679999999999999999875 5679999999877 6676441100 0 000 001112
Q ss_pred HHHH-hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCC
Q psy5220 188 LTKL-SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGF 249 (286)
Q Consensus 188 ~~~l-~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~ 249 (286)
+.++ .+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+.
T Consensus 97 ~~~l~~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~ 175 (258)
T 3lao_A 97 WGVVQPRRSKPLVVAVQGTCWTAGI-ELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDE 175 (258)
T ss_dssp TSCSSSCCCSCEEEEECSEEETHHH-HHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHHHHHHTTCCC
T ss_pred HHHHHHhCCCCEEEEECCEeEhHHH-HHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCC
Confidence 3445 67899999999999999996 588899999999999999864332 44445432 55777
Q ss_pred CCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 250 QSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 250 ~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+|+.+.+.|+||.|++++++.+...++++.+...
T Consensus 176 ~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 210 (258)
T 3lao_A 176 FDADEALRMRLLTEVVEPGEELARALEYAERIARA 210 (258)
T ss_dssp EEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhC
Confidence 89999999999999999999998888888887654
No 79
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=99.47 E-value=8.5e-13 Score=118.38 Aligned_cols=159 Identities=14% Similarity=0.150 Sum_probs=118.2
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeC-C-----Ccchhhch----HhHHHH-HHHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITAT-G-----GARMQEGL----LSLMQM-AKTTAILTKL 191 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~ds-g-----Ga~i~Eg~----~~l~~~-~~~~~a~~~l 191 (286)
|+++..|..- .++++.++.+.+.++++.+. +..+.+|+|... | |+++.+-. .....+ ..+...+.++
T Consensus 15 v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l 93 (260)
T 1sg4_A 15 VAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRL 93 (260)
T ss_dssp EEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 5555555433 59999999999999999875 556999999987 3 56775410 111111 1223345567
Q ss_pred hcCCCCEEEEEcCCcchhhhhhccccccEEEEc--CCcEEEeeChhh-----------hhhhhhcc------CCCCCCCH
Q psy5220 192 SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAE--PGALIGFAGPRV-----------IKNTVKEK------LPDGFQSS 252 (286)
Q Consensus 192 ~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~--~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A 252 (286)
.+.++|+|++|.|+|+|||. .++++||++||. ++|+|++....+ +.+.+|.. ++.+..+|
T Consensus 94 ~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~llltg~~~~a 172 (260)
T 1sg4_A 94 YQSNLVLVSAINGACPAGGC-LVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPP 172 (260)
T ss_dssp HTCSSEEEEEECEEBCHHHH-HHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBCH
T ss_pred HcCCCCEEEEECCeeehHHH-HHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHHHHHcCCcCCH
Confidence 78899999999999999996 588899999999 899998763322 33344432 34677899
Q ss_pred HHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 253 EFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 253 ~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+.+.|+||.|++++++.+...++++.+...
T Consensus 173 ~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 204 (260)
T 1sg4_A 173 AEALQVGIVDQVVPEEQVQSTALSAIAQWMAI 204 (260)
T ss_dssp HHHHHHTSSSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HHHHHcCCCCEecCHHHHHHHHHHHHHHHHhC
Confidence 99999999999999889999888888887654
No 80
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=99.46 E-value=3.8e-13 Score=121.24 Aligned_cols=157 Identities=16% Similarity=0.112 Sum_probs=112.0
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC-----CcchhhchHh-------HHHHHHHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG-----GARMQEGLLS-------LMQMAKTTAILTKL 191 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg-----Ga~i~Eg~~~-------l~~~~~~~~a~~~l 191 (286)
|+++..|.--..++++.+..+.+.++++.+.+..+.+|+|+..| |+++.+-... ..........+.++
T Consensus 17 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l 96 (267)
T 3hp0_A 17 VCYITFHRPEANNTINDTLIEECLQVLNQCETSTVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKL 96 (267)
T ss_dssp EEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHSSCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCCCHHHHHHHHHH
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhcCCCEEEEEECCCCceecCcCHHHHHhcccChHHHHHHHHHHHHHHHHH
Confidence 56666666556799999999999999999876679999999876 5676441100 00011222334556
Q ss_pred hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh----------hhhhhhcc------CCCCCCCHHHH
Q psy5220 192 SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV----------IKNTVKEK------LPDGFQSSEFL 255 (286)
Q Consensus 192 ~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v----------i~~~~g~~------l~~~~~~A~~~ 255 (286)
.+.++|+|++|.|+|+|||. .++++||++||.++|+|++...++ +.+.+|.. ++.+..+|+.+
T Consensus 97 ~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~r~vG~~~A~ellltg~~i~A~eA 175 (267)
T 3hp0_A 97 QTGPYVTISHVRGKVNAGGL-GFVSATDIAIADQTASFSLSELLFGLYPACVLPFLIRRIGRQKAHYMTLMTKPISVQEA 175 (267)
T ss_dssp HHSSSEEEEEECSEEETTHH-HHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHHHHHCHHHHHHHHHHCCCBCHHHH
T ss_pred HcCCCCEEEEECCEEeehHH-HHHHhCCEEEEcCCCEEECchhccCcCchhHHHHHHHHhCHHHHHHHHHcCCCCCHHHH
Confidence 67899999999999999995 588899999999999998874332 33334432 44677899999
Q ss_pred HHcCccceEeCchhHHHHHHHHHHHHhc
Q psy5220 256 LKKGALDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 256 ~~~G~vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
++.|+||.|+++.+. .+.++++.+..
T Consensus 176 ~~~GLV~~vv~~~~~--~~~~~a~~la~ 201 (267)
T 3hp0_A 176 SEWGLIDAFDAESDV--LLRKHLLRLRR 201 (267)
T ss_dssp HHHTSSSCBCSCTTH--HHHHHHHHHTT
T ss_pred HHCCCcceecCCHHH--HHHHHHHHHHh
Confidence 999999999987431 13344444443
No 81
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=99.46 E-value=1.6e-13 Score=123.39 Aligned_cols=164 Identities=10% Similarity=0.018 Sum_probs=121.2
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHhHH----HH-HHHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLSLM----QM-AKTTAI 187 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~l~----~~-~~~~~a 187 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-..... .+ ......
T Consensus 15 ~~~~-v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 93 (265)
T 3swx_A 15 RDGY-VLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTPEGGINP 93 (265)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CCCCCTTCCCT
T ss_pred EECC-EEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhHHHHHHHHHH
Confidence 3443 6666666655679999999999999999875 6679999999877 556644110000 00 000111
Q ss_pred HHHH-hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCC
Q psy5220 188 LTKL-SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGF 249 (286)
Q Consensus 188 ~~~l-~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~ 249 (286)
+..+ .+.++|+|++|.|+|+|||. .++++||++||.++|+|++..... +.+.+|.. ++.+.
T Consensus 94 ~~~l~~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~ 172 (265)
T 3swx_A 94 WQVDGRQLSKPLLVAVHGKVLTLGI-ELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADT 172 (265)
T ss_dssp TCCSSCCCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHTTCCC
T ss_pred HHHHHHhCCCCEEEEEcCeeehHHH-HHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHHHHHHHHHcCCc
Confidence 2345 67899999999999999995 588899999999999999864332 34444532 56777
Q ss_pred CCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 250 QSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 250 ~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+|+.+.+.|+||.|++++++.+...++++.+...
T Consensus 173 ~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 207 (265)
T 3swx_A 173 FDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQ 207 (265)
T ss_dssp EEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcC
Confidence 89999999999999999999988888888887654
No 82
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=99.46 E-value=1.3e-13 Score=122.50 Aligned_cols=159 Identities=13% Similarity=0.139 Sum_probs=118.5
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHhHHHH-HHHHHHHHHHhcCCC
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLSLMQM-AKTTAILTKLSKKKI 196 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~l~~~-~~~~~a~~~l~~~~v 196 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-. ..... ......+..+.+.++
T Consensus 13 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~-~~~~~~~~~~~~~~~l~~~~k 91 (243)
T 2q35_A 13 VVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLI-RKTRGEVEVLDLSGLILDCEI 91 (243)
T ss_dssp EEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHH-HHHTTCCCCCCCHHHHHTCCS
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHh-hccchhhHHHHHHHHHHhCCC
Confidence 6677777655679999999999999999875 5679999999865 55664310 00000 001112445667899
Q ss_pred CEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHHHcC
Q psy5220 197 PFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLLKKG 259 (286)
Q Consensus 197 P~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~~~G 259 (286)
|+|++|.|+|+|||. .++++||++||.++|+|++...+. +.+.+|.. ++.+..+|+.+.+.|
T Consensus 92 PvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~G 170 (243)
T 2q35_A 92 PIIAAMQGHSFGGGL-LLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKELAERG 170 (243)
T ss_dssp CEEEEECSEEETHHH-HHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTT
T ss_pred CEEEEEcCccccchH-HHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcC
Confidence 999999999999996 588899999999999998863221 33444432 346678899999999
Q ss_pred ccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 260 ALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 260 ~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+||.|++++++.+...++.+.+...
T Consensus 171 Lv~~vv~~~~l~~~a~~~a~~la~~ 195 (243)
T 2q35_A 171 IPFPVVSRQDVLNYAQQLGQKIAKS 195 (243)
T ss_dssp CSSCEECHHHHHHHHHHHHHHHTTS
T ss_pred CCCEecChhHHHHHHHHHHHHHHhC
Confidence 9999999999999999988887654
No 83
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=99.46 E-value=1.9e-13 Score=123.83 Aligned_cols=160 Identities=11% Similarity=0.163 Sum_probs=113.7
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH-h-HHHHHH--H-HHHHHHHh
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL-S-LMQMAK--T-TAILTKLS 192 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~-~-l~~~~~--~-~~a~~~l~ 192 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. . ...... . ...+..+.
T Consensus 30 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (278)
T 4f47_A 30 TLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALL 109 (278)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC----------------------CTTCBTTTT
T ss_pred EEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHHHHHHHHHHHHHH
Confidence 6666666655679999999999999999875 5679999999876 445543110 0 000000 0 01122334
Q ss_pred ---cCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCH
Q psy5220 193 ---KKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSS 252 (286)
Q Consensus 193 ---~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A 252 (286)
+.++|+|++|.|.|+|||. .++++||++||.++++|++....+ +.+.+|.. ++.+..+|
T Consensus 110 ~~~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~a 188 (278)
T 4f47_A 110 KGRRLKKPLIAAVEGPAIAGGT-EILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITA 188 (278)
T ss_dssp BSCCCSSCEEEEECSEEETHHH-HHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHHHHHHHHHCCCEEH
T ss_pred HhcCCCCCEEEEECCEEehHHH-HHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCH
Confidence 7899999999999999996 588999999999999998864332 33334432 34667889
Q ss_pred HHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 253 EFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 253 ~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+.+++.|+||.|++++++.+...++++.+...
T Consensus 189 ~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 220 (278)
T 4f47_A 189 AEAKEMGLVGHVVPDGQALTKALEIAEIIAAN 220 (278)
T ss_dssp HHHHHTTSCSEEECTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHCCCceEeeChhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999998888887654
No 84
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=99.44 E-value=1.8e-12 Score=116.67 Aligned_cols=158 Identities=15% Similarity=0.257 Sum_probs=115.4
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch---Hh--H----HH-HHHHHH
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL---LS--L----MQ-MAKTTA 186 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~---~~--l----~~-~~~~~~ 186 (286)
.|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-. .. . .. ......
T Consensus 20 ~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (267)
T 3oc7_A 20 PVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAA 99 (267)
T ss_dssp SEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhhhhhHHHHHHHHHH
Confidence 36667776666679999999999999999875 6679999998876 66775411 00 0 01 122233
Q ss_pred HHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCC
Q psy5220 187 ILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGF 249 (286)
Q Consensus 187 a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~ 249 (286)
.+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +. .+|.. ++.+.
T Consensus 100 ~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG~~~A~~l~ltg~~ 177 (267)
T 3oc7_A 100 LMRAIVESRLPVIAAIDGHVRAGGF-GLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLSARAAARYYLTGEK 177 (267)
T ss_dssp HHHHHHHCSSCEEEEECSEEETTHH-HHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSCHHHHHHHHHHCCC
T ss_pred HHHHHHhCCCCEEEEEcCeecccch-HHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhCHHHHHHHHHcCCc
Confidence 4556677899999999999999996 588899999999999999864332 22 23322 34667
Q ss_pred CCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 250 QSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 250 ~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+|+.+++.|+||.| ++++.+.+.++++.+...
T Consensus 178 ~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~ 210 (267)
T 3oc7_A 178 FDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRG 210 (267)
T ss_dssp BCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTS
T ss_pred cCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhC
Confidence 899999999999999 677888888888877654
No 85
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=99.43 E-value=1.1e-13 Score=124.50 Aligned_cols=160 Identities=11% Similarity=0.125 Sum_probs=118.2
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH-hHHHH--HHHHHHHHHHhcC
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL-SLMQM--AKTTAILTKLSKK 194 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~-~l~~~--~~~~~a~~~l~~~ 194 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. ..... .........+.+.
T Consensus 21 va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (262)
T 3r9q_A 21 VTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHGPGPMGPSRLRL 100 (262)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCTTSSCTTSSTTCCC
T ss_pred EEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHHhhhhHHHHHHHhC
Confidence 6667776666679999999999999999875 5679999999876 566644110 00000 0000011223468
Q ss_pred CCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHHH
Q psy5220 195 KIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLLK 257 (286)
Q Consensus 195 ~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~~ 257 (286)
++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.+++
T Consensus 101 ~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~ 179 (262)
T 3r9q_A 101 SKPVIAAISGHAVAGGI-ELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANEALD 179 (262)
T ss_dssp SSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHH
T ss_pred CCCEEEEECCeeehhhh-HHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHH
Confidence 99999999999999995 588899999999999998862221 34444433 3466789999999
Q ss_pred cCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 258 KGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 258 ~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.|+||.|++++++.+...++++.+...
T Consensus 180 ~GLv~~vv~~~~l~~~a~~~a~~la~~ 206 (262)
T 3r9q_A 180 IGLVNRVVARGQAREAAETLAAEIAAF 206 (262)
T ss_dssp TTSCSEEECTTCHHHHHHHHHHHHHHS
T ss_pred cCCccEecChhHHHHHHHHHHHHHHhC
Confidence 999999999999999999998888754
No 86
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=99.43 E-value=1.1e-12 Score=118.42 Aligned_cols=160 Identities=14% Similarity=0.221 Sum_probs=118.1
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------CcchhhchH-hHH--H-H--HHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGLL-SLM--Q-M--AKTTAILTK 190 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~~-~l~--~-~--~~~~~a~~~ 190 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. ... . + ......+..
T Consensus 23 va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (273)
T 2uzf_A 23 IAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRL 102 (273)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------CCSSSCCCTHHHHHHH
T ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccchhhhHHHhhHHHHHHH
Confidence 7777777665779999999999999999875 5679999998765 556643100 000 0 0 001122345
Q ss_pred HhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHH
Q psy5220 191 LSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSE 253 (286)
Q Consensus 191 l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~ 253 (286)
+.+.++|+|++|.|.|+|||. .++++||++||.++|+|++..... +.+.+|.. ++.+..+|+
T Consensus 103 l~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~ 181 (273)
T 2uzf_A 103 IRIIPKPVIAMVKGYAVGGGN-VLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQ 181 (273)
T ss_dssp HHHSSSCEEEEECEEEETHHH-HHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHHHHHHHTCCCEEHH
T ss_pred HHhCCCCEEEEECCEEeehhH-HHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHHHHHHHhCCCCCHH
Confidence 566799999999999999996 588899999999999998863332 34444432 456778999
Q ss_pred HHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 254 FLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 254 ~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+++.|+||.|++++++.+...++++.+...
T Consensus 182 eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 212 (273)
T 2uzf_A 182 EALDMGLVNTVVPLEKVEDETVQWCKEIMKH 212 (273)
T ss_dssp HHHHHTSSSEEECGGGSHHHHHHHHHHHTTS
T ss_pred HHHHcCCCccccCHHHHHHHHHHHHHHHHhC
Confidence 9999999999999988888888888877654
No 87
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=99.43 E-value=2.8e-12 Score=116.23 Aligned_cols=164 Identities=11% Similarity=0.084 Sum_probs=119.2
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch-----H-----h-HHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL-----L-----S-LMQM 181 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~-----~-----~-l~~~ 181 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|+..| |+++.+-. . . ...+
T Consensus 15 ~~~~-v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 93 (280)
T 1pjh_A 15 IEGP-FFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKW 93 (280)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHH
T ss_pred EECC-EEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhcccccccchhhhHHHH
Confidence 3443 6677777666779999999999999999885 5679999999865 66775410 0 0 0001
Q ss_pred H-H----HHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEc-CCcEEEeeChhh-----------hhhhhhcc
Q psy5220 182 A-K----TTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAE-PGALIGFAGPRV-----------IKNTVKEK 244 (286)
Q Consensus 182 ~-~----~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~-~~A~i~~~gp~v-----------i~~~~g~~ 244 (286)
. . ....+..+.+.++|+|++|.|+|+|||. .++++||++||. ++|+|+++..++ +.+.+|..
T Consensus 94 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~-~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~~l~r~vG~~ 172 (280)
T 1pjh_A 94 VSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSA-ALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTN 172 (280)
T ss_dssp HHHTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHH-HHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeeeHHH-HHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHHHHHHHhCHH
Confidence 1 1 1123456677899999999999999996 588899999999 999999863321 44445532
Q ss_pred ------CCCCCCCHHHHHHcCccceEeCch-----hHHHHH-HHHHHHHhcC
Q psy5220 245 ------LPDGFQSSEFLLKKGALDMIIDRR-----KLRFKI-ANLLALLQKK 284 (286)
Q Consensus 245 ------l~~~~~~A~~~~~~G~vD~Vv~~~-----e~~~~l-~~~L~~l~~~ 284 (286)
++.+..+|+.+++.|+||.|++++ ++.+.. .++.+.+...
T Consensus 173 ~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~ 224 (280)
T 1pjh_A 173 TTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGL 224 (280)
T ss_dssp HHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcC
Confidence 457778999999999999999885 677666 4777776653
No 88
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=99.43 E-value=1.3e-12 Score=119.97 Aligned_cols=146 Identities=14% Similarity=0.195 Sum_probs=107.8
Q ss_pred CCChHHHHHHHHHHHHHHh------CCCcEEEEEeCC-----Ccchhhch--------HhHHH-HHHHHHHHHHH---hc
Q psy5220 137 SMGSVVGERFIQGAQISLE------QKIPFVCITATG-----GARMQEGL--------LSLMQ-MAKTTAILTKL---SK 193 (286)
Q Consensus 137 s~~~~~~~K~~r~~~~A~~------~~iPlV~l~dsg-----Ga~i~Eg~--------~~l~~-~~~~~~a~~~l---~~ 193 (286)
+++.++.+.+.++++.+.+ ..+.+|+|...| |+++.+-. ..+.. ...+...+..+ ..
T Consensus 59 al~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 138 (305)
T 3m6n_A 59 CFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVGLG 138 (305)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred CCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHHhccccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999998754 689999998876 56774411 01111 11222223333 35
Q ss_pred CCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHH
Q psy5220 194 KKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLL 256 (286)
Q Consensus 194 ~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~ 256 (286)
.++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.++
T Consensus 139 ~~kPvIAaV~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~ 217 (305)
T 3m6n_A 139 ARAHSIALVQGNALGGGF-EAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLL 217 (305)
T ss_dssp TTCEEEEEECSCEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCHHHHHHHHHHCCEEEHHHHH
T ss_pred CCCCEEEEECCEeehHHH-HHHHhCCEEEEcCCCEEECchhccCcCCCccHHHHHHHHhcHHHHHHHHHcCCCCCHHHHH
Confidence 799999999999999995 588899999999999999864332 22333322 345667899999
Q ss_pred HcCccceEeCchhHHHHHHHHHHHHhc
Q psy5220 257 KKGALDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 257 ~~G~vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
+.|+||.|++++++.+.+.++++.+..
T Consensus 218 ~~GLv~~vv~~~~l~~~a~~~a~~la~ 244 (305)
T 3m6n_A 218 GMGLVDRVVPRGQGVAAVEQVIRESKR 244 (305)
T ss_dssp HHTSCSEEECTTCHHHHHHHHHHHHTT
T ss_pred HCCCCCEecChhHHHHHHHHHHHHHhh
Confidence 999999999999999998888888754
No 89
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=99.43 E-value=2.9e-12 Score=115.26 Aligned_cols=164 Identities=10% Similarity=0.050 Sum_probs=120.5
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch----H-hHHHH-HHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL----L-SLMQM-AKTTA 186 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~----~-~l~~~-~~~~~ 186 (286)
++|..|+++..|..-..++++.+..+.+.++++.+. +..+.+|+|...| |+++.+-. . ....+ .....
T Consensus 29 ~~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 108 (263)
T 2j5g_A 29 RDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKK 108 (263)
T ss_dssp ECTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHHHHHHH
T ss_pred EcCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHHHHHHHHHH
Confidence 455347777776544557899999999999999875 5679999998765 56775411 0 01111 12223
Q ss_pred HHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEe-eChh-----------hhhhhhhcc------CCCC
Q psy5220 187 ILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGF-AGPR-----------VIKNTVKEK------LPDG 248 (286)
Q Consensus 187 a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~-~gp~-----------vi~~~~g~~------l~~~ 248 (286)
.+.++.+.++|+|++|.|+|+| | +.++++||++||.++|+|++ +... .+.+.+|.. ++.+
T Consensus 109 ~~~~l~~~~kPvIAav~G~a~G-G-~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~ 186 (263)
T 2j5g_A 109 VLQNLLDIEVPVISAVNGAALL-H-SEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQE 186 (263)
T ss_dssp HHHHHHTCCSCEEEEECSEECS-C-GGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCEEEEECCcchH-H-HHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCC
Confidence 4556778899999999999995 5 46888999999999999988 3111 144444532 4567
Q ss_pred CCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 249 FQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 249 ~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
..+|+.+.+.|+||.|++++++.+.+.++.+.+...
T Consensus 187 ~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 222 (263)
T 2j5g_A 187 KLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQ 222 (263)
T ss_dssp CEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999988888887654
No 90
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=99.43 E-value=1.3e-13 Score=124.01 Aligned_cols=162 Identities=13% Similarity=0.115 Sum_probs=119.4
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchH----hH-HHHHHHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLL----SL-MQMAKTTAI 187 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~----~l-~~~~~~~~a 187 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.. .. ..+.. ...
T Consensus 13 ~~~~-v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~-~~~ 90 (265)
T 3qxz_A 13 IRDG-VAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDFSA-SPV 90 (265)
T ss_dssp EETT-EEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSCCCS-CCS
T ss_pred EECC-EEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHHHHH-HHH
Confidence 3443 6666666555679999999999999999875 5679999999876 566644100 00 00000 112
Q ss_pred HHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCC
Q psy5220 188 LTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQ 250 (286)
Q Consensus 188 ~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~ 250 (286)
+..+...++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..
T Consensus 91 ~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~ 169 (265)
T 3qxz_A 91 QPAAFELRTPVIAAVNGHAIGIGM-TLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASF 169 (265)
T ss_dssp SSCGGGSSSCEEEEECSEEETHHH-HHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHHHHHHCCCB
T ss_pred HHHHHhCCCCEEEEECCEEehHhH-HHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCc
Confidence 344667899999999999999995 588899999999999999863332 33444432 346778
Q ss_pred CHHHHHHcCccceEeCchhHHHHHHHHHHHHhc
Q psy5220 251 SSEFLLKKGALDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 251 ~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
+|+.+.+.|+||.|++++++.+.+.++++.+..
T Consensus 170 ~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~ 202 (265)
T 3qxz_A 170 SAQRAVETGLANRCLPAGKVLGAALRMAHDIAT 202 (265)
T ss_dssp CHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHc
Confidence 999999999999999999998888888887764
No 91
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=99.42 E-value=2.2e-13 Score=123.07 Aligned_cols=164 Identities=12% Similarity=0.101 Sum_probs=118.7
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHhH------------HH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLSL------------MQ 180 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~l------------~~ 180 (286)
.+| .|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|...| |+++.+-.... ..
T Consensus 17 ~~~-~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 95 (274)
T 3tlf_A 17 VDG-HTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQ 95 (274)
T ss_dssp EET-TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CTTCSGGG
T ss_pred EEC-CEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccchhhHHHH
Confidence 344 36666676666679999999999999999875 5679999999876 56664311000 00
Q ss_pred HHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh----------hhhhhhcc------
Q psy5220 181 MAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV----------IKNTVKEK------ 244 (286)
Q Consensus 181 ~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v----------i~~~~g~~------ 244 (286)
+..+...+..+.+.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|..
T Consensus 96 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~g~~~~L~r~vG~~~A~~l~ 174 (274)
T 3tlf_A 96 WEAPQEGTPPFRTMAKPVLTAVNGICCGAGM-DWVTTTDIVIASEQATFFDPHVSIGLVAGRELVRVSRVLPRSIALRMA 174 (274)
T ss_dssp GSCCCTTCCCTTSCCSCEEEEECSEEEGGGH-HHHHHSSEEEEETTCEEECCGGGGTCCCCHHHHHHTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHH-HHHHhCCEEEEcCCCEEECcccccCcccchHHHHHHHHhCHHHHHHHH
Confidence 0001112334667899999999999999996 588899999999999999863322 22233322
Q ss_pred CCCC--CCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 245 LPDG--FQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 245 l~~~--~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
++.+ ..+|+.+++.|+||.|++++++.+...++++.+...
T Consensus 175 ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 216 (274)
T 3tlf_A 175 LMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSN 216 (274)
T ss_dssp HHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhC
Confidence 3456 789999999999999999999999999999888764
No 92
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=99.42 E-value=1.9e-12 Score=116.96 Aligned_cols=158 Identities=15% Similarity=0.232 Sum_probs=114.5
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------Ccchhhch----HhHHHH-HHHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGL----LSLMQM-AKTTAILTKL 191 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~----~~l~~~-~~~~~a~~~l 191 (286)
|+++..|.--..++++..+.+.+.++++.+. +..+.+|+|...| |+++.+-. .....+ ..+...+..+
T Consensus 22 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l 101 (272)
T 1hzd_A 22 IVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDI 101 (272)
T ss_dssp EEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHHHHHHHHHHHHHHHHH
Confidence 6666666555679999999999999999875 5679999998865 67775411 001111 1222345567
Q ss_pred hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHH
Q psy5220 192 SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEF 254 (286)
Q Consensus 192 ~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~ 254 (286)
.+.++|+|++|.|.|+|||. .++++||+++|.++|+|++....+ +.+.+|.. ++.+..+|+.
T Consensus 102 ~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~e 180 (272)
T 1hzd_A 102 ANLPVPTIAAIDGLALGGGL-ELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKE 180 (272)
T ss_dssp HTCSSCEEEEESEEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHH
T ss_pred HhCCCCEEEEeCceEEecHH-HHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCcCCHHH
Confidence 78899999999999999996 588899999999999999874432 33344432 3466678999
Q ss_pred HHHcCccceEeCchhH----HHHHHHHHHHHh
Q psy5220 255 LLKKGALDMIIDRRKL----RFKIANLLALLQ 282 (286)
Q Consensus 255 ~~~~G~vD~Vv~~~e~----~~~l~~~L~~l~ 282 (286)
+++.|+||.|++++++ .+...++.+.+.
T Consensus 181 A~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la 212 (272)
T 1hzd_A 181 AKAVGLISHVLEQNQEGDAAYRKALDLAREFL 212 (272)
T ss_dssp HHHHTSCSEEECCCTTSCHHHHHHHHHHHTTT
T ss_pred HHHCCCcceecChhhhhHHHHHHHHHHHHHHH
Confidence 9999999999998763 444555555443
No 93
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=99.41 E-value=4.3e-12 Score=113.71 Aligned_cols=163 Identities=15% Similarity=0.116 Sum_probs=118.7
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhch----HhHHHH-HHHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGL----LSLMQM-AKTTAI 187 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~----~~l~~~-~~~~~a 187 (286)
.+|. |+++..|..-..++++....+.+.++++.+. +..+.+|+|...| |+++.+-. ...... ......
T Consensus 22 ~~~~-v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 100 (257)
T 1szo_A 22 RDGG-VLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRL 100 (257)
T ss_dssp EETT-EEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHH
T ss_pred EECC-EEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCHHHHHHHHHHHHHH
Confidence 3443 6666666444557899999999999999875 5679999999865 56775410 111111 112233
Q ss_pred HHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEe-eChhh-----------hhhhhhcc------CCCCC
Q psy5220 188 LTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGF-AGPRV-----------IKNTVKEK------LPDGF 249 (286)
Q Consensus 188 ~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~-~gp~v-----------i~~~~g~~------l~~~~ 249 (286)
+.++...++|+|++|.|+|+| | +.++++||++||.++|+|++ ...++ +.+.+|.. ++.+.
T Consensus 101 ~~~l~~~~kPvIAav~G~a~G-G-~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltG~~ 178 (257)
T 1szo_A 101 LNNLLSIEVPVIAAVNGPVTN-A-PEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQE 178 (257)
T ss_dssp HHHHHHCCSCEEEEECSCBCS-S-THHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCE
T ss_pred HHHHHcCCCcEEEEECCchHH-H-HHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCCC
Confidence 556667899999999999995 5 45788999999999999998 42221 33444432 45677
Q ss_pred CCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 250 QSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 250 ~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+|+.+.+.|+||.|++++++.+...++.+.+...
T Consensus 179 ~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 213 (257)
T 1szo_A 179 LDARTALDYGAVNEVLSEQELLPRAWELARGIAEK 213 (257)
T ss_dssp EEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhC
Confidence 88999999999999999889999999988887654
No 94
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=99.41 E-value=2.6e-13 Score=121.62 Aligned_cols=157 Identities=15% Similarity=0.194 Sum_probs=116.7
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHh--HHHHHHHHHHHHHHhcCC
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLS--LMQMAKTTAILTKLSKKK 195 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~--l~~~~~~~~a~~~l~~~~ 195 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|+..| |+++.+-... ......+ .+..+ ..+
T Consensus 17 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~--~~~~~-~~~ 93 (256)
T 3trr_A 17 VLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSERGL--GFTNV-PPR 93 (256)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEETTEE--TTSSS-CCS
T ss_pred EEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhhhhh--hHHHh-cCC
Confidence 6666666655679999999999999999875 5679999998866 5566431100 0000000 12233 679
Q ss_pred CCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHHHHHc
Q psy5220 196 IPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEFLLKK 258 (286)
Q Consensus 196 vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~~~~~ 258 (286)
+|+|++|.|+|+|||. .++++||++||.++|+|++..... +.+.+|.. ++.+..+|+.+++.
T Consensus 94 kPvIAav~G~a~GgG~-~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~ 172 (256)
T 3trr_A 94 KPIIAAVEGFALAGGT-ELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESFTAEDAAKY 172 (256)
T ss_dssp SCEEEEECSBCCTHHH-HHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHGGG
T ss_pred CCEEEEECCeeeechh-HHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHC
Confidence 9999999999999996 588899999999999998764332 33334432 34667889999999
Q ss_pred CccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 259 GALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 259 G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
|+||.|++++++.+...++++.+...
T Consensus 173 GLv~~vv~~~~l~~~a~~~a~~la~~ 198 (256)
T 3trr_A 173 GFINRLVDDGQALDTALELAAKITAN 198 (256)
T ss_dssp TCCSEEECTTCHHHHHHHHHHHHHTS
T ss_pred CCeeEecChHHHHHHHHHHHHHHHcC
Confidence 99999999999999999998888754
No 95
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=99.40 E-value=2.4e-13 Score=122.37 Aligned_cols=162 Identities=11% Similarity=0.144 Sum_probs=116.1
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----CcchhhchHh--HHHHHHHHHHHHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEGLLS--LMQMAKTTAILTK 190 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg~~~--l~~~~~~~~a~~~ 190 (286)
.+|. |+++..|.--..++++.++.+.+.++++.+. +..+.+|+|..+| |+++.+-... ......-+ .+..
T Consensus 21 ~~~~-v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~-~~~~ 98 (265)
T 3qxi_A 21 QRDR-ILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEGRGL-GFTE 98 (265)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETTTEE-TTTT
T ss_pred EECC-EEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhhhhh-hHHH
Confidence 3443 6666666655679999999999999999875 5679999999876 4566431000 00000000 1223
Q ss_pred HhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHH
Q psy5220 191 LSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSE 253 (286)
Q Consensus 191 l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~ 253 (286)
+.. ++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+
T Consensus 99 ~~~-~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~ 176 (265)
T 3qxi_A 99 RPP-AKPLIAAVEGYALAGGT-ELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLSAE 176 (265)
T ss_dssp SCC-SSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCCEEHH
T ss_pred hhC-CCCEEEEECCceeHHHH-HHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHHHHHHcCCCcCHH
Confidence 333 89999999999999995 588899999999999999874432 33334432 346678899
Q ss_pred HHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 254 FLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 254 ~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
.+++.|+||.|++++++.+.+.++++.+...
T Consensus 177 eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 207 (265)
T 3qxi_A 177 RAHALGMVNVLAEPGAALDAAIALAEKITAN 207 (265)
T ss_dssp HHHHTTSCSEEECTTCHHHHHHHHHHHHHTS
T ss_pred HHHHCCCccEeeChhHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999998888754
No 96
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=99.39 E-value=5.1e-13 Score=120.38 Aligned_cols=159 Identities=15% Similarity=0.156 Sum_probs=117.3
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------CcchhhchH----hHHH-HHHHHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGLL----SLMQ-MAKTTAILTKL 191 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~~----~l~~-~~~~~~a~~~l 191 (286)
|+++..|.--..++++.++.+.+.++++.+. +..+.+|+|+..| |+++.+-.. .... .......+. .
T Consensus 19 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~-~ 97 (267)
T 3r9t_A 19 VMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYV-R 97 (267)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTCGGGCGGGTT-T
T ss_pred EEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHHHhHHHHHHH-H
Confidence 6667676666779999999999999999875 5679999998876 456643100 0000 000001121 2
Q ss_pred hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCHHH
Q psy5220 192 SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSSEF 254 (286)
Q Consensus 192 ~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A~~ 254 (286)
...++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|+.
T Consensus 98 ~~~~kPvIAav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~i~A~e 176 (267)
T 3r9t_A 98 HFIDKPTIAAVNGTALGGGT-ELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAA 176 (267)
T ss_dssp CCCSSCEEEEECSEECTHHH-HHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHHH
T ss_pred HhCCCCEEEEECCEEEhHHH-HHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHH
Confidence 26799999999999999996 588899999999999998863332 33444432 3466789999
Q ss_pred HHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 255 LLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 255 ~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+++.|+||.|++++++.+...++.+.+...
T Consensus 177 A~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 206 (267)
T 3r9t_A 177 ARDWGLINEVVEAGSVLDAALALASAITVN 206 (267)
T ss_dssp HHHHTSSSEEECTTCHHHHHHHHHHHHHTS
T ss_pred HHHCCCccEEcChhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998888764
No 97
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=99.34 E-value=2.2e-11 Score=114.25 Aligned_cols=153 Identities=11% Similarity=0.116 Sum_probs=111.7
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------CcchhhchHh-------HHH-HHH
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGLLS-------LMQ-MAK 183 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~~~-------l~~-~~~ 183 (286)
.+|. |+++..|.--..++++..+.+.+.++++.+. +..+.+|+|+.+| |+++.+-... ... ...
T Consensus 12 ~~~~-v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~ 90 (363)
T 3bpt_A 12 KKGC-TGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFRE 90 (363)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCHHHHHHH
T ss_pred EECC-EEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHHHHHHHHH
Confidence 3443 6666666655679999999999999999875 5679999999876 5676441000 011 122
Q ss_pred HHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc-----CCC
Q psy5220 184 TTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK-----LPD 247 (286)
Q Consensus 184 ~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~-----l~~ 247 (286)
....+..+.+.++|+|++|.|+|+|||. .++++||++||.++|+|++...++ +.+.+|.. ++.
T Consensus 91 ~~~~~~~l~~~~kPvIAav~G~a~GgG~-~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~~a~~l~ltg 169 (363)
T 3bpt_A 91 EYMLNNAVGSCQKPYVALIHGITMGGGV-GLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTG 169 (363)
T ss_dssp HHHHHHHHHTCSSCEEEEECSEEETHHH-HTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTTHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCEEEEECCEEehHHH-HHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHHHHHHHHHcC
Confidence 2233456778899999999999999995 688999999999999999874332 23333321 346
Q ss_pred CCCCHHHHHHcCccceEeCchhHHHH
Q psy5220 248 GFQSSEFLLKKGALDMIIDRRKLRFK 273 (286)
Q Consensus 248 ~~~~A~~~~~~G~vD~Vv~~~e~~~~ 273 (286)
+..+|+.+++.|+||.|++++++.+.
T Consensus 170 ~~i~A~eA~~~GLv~~vv~~~~l~~~ 195 (363)
T 3bpt_A 170 FRLKGRDVYRAGIATHFVDSEKLAML 195 (363)
T ss_dssp CCEETHHHHHTTSCSEECCGGGHHHH
T ss_pred CCCCHHHHHHCCCcceecCHHHHHHH
Confidence 67789999999999999999877654
No 98
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=99.34 E-value=8.7e-12 Score=121.38 Aligned_cols=164 Identities=13% Similarity=0.078 Sum_probs=120.2
Q ss_pred EcCeeEEEEEEcCcc----------cccCCChHHHHHHHHHHHHHH-h-CCCcEEEEEe-CC-----CcchhhchH----
Q psy5220 119 IMNLPLVVAVFEFEF----------MGGSMGSVVGERFIQGAQISL-E-QKIPFVCITA-TG-----GARMQEGLL---- 176 (286)
Q Consensus 119 i~G~~v~v~a~d~~~----------~gGs~~~~~~~K~~r~~~~A~-~-~~iPlV~l~d-sg-----Ga~i~Eg~~---- 176 (286)
.+|. |+++..|..- ..++++..+.+.+.++++.+. + ..+.+|+|.. .| |+++.+-..
T Consensus 27 ~~gg-VA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~el~~~~~~ 105 (556)
T 2w3p_A 27 FNGP-VATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHA 105 (556)
T ss_dssp EETT-EEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHHSCHH
T ss_pred eeCC-EEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHHHhhcccH
Confidence 3443 6666666543 579999999999999999875 5 6899999998 43 667754100
Q ss_pred hHHHHHH-HHHHHHHH----hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCC--cEEEeeChh-h-----------h
Q psy5220 177 SLMQMAK-TTAILTKL----SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPG--ALIGFAGPR-V-----------I 237 (286)
Q Consensus 177 ~l~~~~~-~~~a~~~l----~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~--A~i~~~gp~-v-----------i 237 (286)
....+.+ +...+..+ .+.++|+|++|.|.|+|||. .++++||++||.++ |+|++.... + +
T Consensus 106 ~~~~~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~AlGGGl-eLALACD~rIAse~~~A~FglPEv~~LGL~Pg~Ggt~rL 184 (556)
T 2w3p_A 106 WKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGY-ELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRV 184 (556)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHHH-HHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCeechhhH-HHHHhCCEEEEcCCCCcEEecccccccCCCCCccHHHHH
Confidence 0011111 12234455 67899999999999999995 58889999999999 999886544 2 3
Q ss_pred h--hhhhcc------CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 238 K--NTVKEK------LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 238 ~--~~~g~~------l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
. +.+|.. ++.+..+|+.+++.|+||.|++++++.+...++.+.+...
T Consensus 185 p~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~ 239 (556)
T 2w3p_A 185 TDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQ 239 (556)
T ss_dssp HHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTT
T ss_pred HhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcC
Confidence 3 334432 4567788999999999999999889999988888887654
No 99
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=99.32 E-value=2.3e-11 Score=115.79 Aligned_cols=149 Identities=11% Similarity=0.054 Sum_probs=111.6
Q ss_pred eEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------CcchhhchHh-----------HHH-HHH
Q psy5220 123 PLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGLLS-----------LMQ-MAK 183 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~~~-----------l~~-~~~ 183 (286)
.|+++..|.--..++++..+.+.+.++++.+. +..+.+|+|..+| |+++.+-... ... +..
T Consensus 51 ~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 130 (407)
T 3ju1_A 51 LVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEE 130 (407)
T ss_dssp EEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSCCHHHHHHHHH
T ss_pred CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccccHHHHHHHHHH
Confidence 47777777666679999999999999999875 6679999999876 5676441100 111 112
Q ss_pred HHHHHHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc-----CCC
Q psy5220 184 TTAILTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK-----LPD 247 (286)
Q Consensus 184 ~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~-----l~~ 247 (286)
....+..+...++|+|++|.|+|+|||. .++++||++||.++|+|++....+ +.+..|.. ++.
T Consensus 131 ~~~l~~~i~~~~kPvIAaVnG~a~GgG~-~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g~~A~~l~ltG 209 (407)
T 3ju1_A 131 EYRLDYLLHTYGKPVLVWGDGIVMGGGL-GLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPGKMGLFLGLTA 209 (407)
T ss_dssp HHHHHHHHHTCSSCEEEECCSEEETHHH-HHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSSTTHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCEEEEECCccccCcc-hHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhHHHHHHHHHcC
Confidence 2234556778899999999999999995 588899999999999999874432 22333311 346
Q ss_pred CCCCHHHHHHcCccceEeCchhHHH
Q psy5220 248 GFQSSEFLLKKGALDMIIDRRKLRF 272 (286)
Q Consensus 248 ~~~~A~~~~~~G~vD~Vv~~~e~~~ 272 (286)
+..+|+.+++.|+||.|++++++.+
T Consensus 210 ~~i~A~eA~~~GLv~~vv~~~~l~~ 234 (407)
T 3ju1_A 210 YHMNAADACYVGLADHYLNRDDKEL 234 (407)
T ss_dssp CCBCHHHHHHHTSCSEECCGGGHHH
T ss_pred CcCcHHHHHHCCCccEEcCHHHHHH
Confidence 6788999999999999999988777
No 100
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.29 E-value=1.9e-11 Score=124.16 Aligned_cols=162 Identities=13% Similarity=0.182 Sum_probs=118.9
Q ss_pred EEEEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC-----Ccchhhc--hHhHHHHHHHHHH
Q psy5220 116 KGSIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG-----GARMQEG--LLSLMQMAKTTAI 187 (286)
Q Consensus 116 ~g~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg-----Ga~i~Eg--~~~l~~~~~~~~a 187 (286)
+=+++|.-..|-.|++. .++++.+..+.+..+++.+. +..+.+|+|+..| |+++.|- ...-..+.+++
T Consensus 24 ~~~~~~~Va~itlnrP~--~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~~~~~~~~-- 99 (742)
T 3zwc_A 24 YLRLPHSLAMIRLCNPP--VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLV-- 99 (742)
T ss_dssp EEECSTTEEEEEECCTT--TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSCSHHHHHH--
T ss_pred EEEeeCCEEEEEeCCCc--ccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChhHHHHHHH--
Confidence 34777765666666665 49999999999999999985 5779999999877 6677551 11111234444
Q ss_pred HHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCC
Q psy5220 188 LTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQ 250 (286)
Q Consensus 188 ~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~ 250 (286)
.++.+.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..
T Consensus 100 -~~i~~~~kPvIAai~G~a~GGG~-elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~~i 177 (742)
T 3zwc_A 100 -DEIQRYQKPVLAAIQGVALGGGL-ELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYL 177 (742)
T ss_dssp -HHHHHCSSCEEEEECSEEETHHH-HHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred -HHHHhCCCCEEEEECccchHHHH-HHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCCch
Confidence 34556799999999999999995 688999999999999999863322 44445543 346778
Q ss_pred CHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 251 SSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 251 ~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+|+.+++.|+||.|++++.+ +...++.+.+..+
T Consensus 178 ~a~eA~~~GLv~~vv~~d~~-~~A~~~A~~ia~~ 210 (742)
T 3zwc_A 178 SADEALRLGILDAVVKSDPV-EEAIKFAQKIIDK 210 (742)
T ss_dssp EHHHHHHHTSCSEEESSCHH-HHHHHHHHHHTTS
T ss_pred hHHHHHHcCCccEecCchhh-HHHHHHHHHHhcC
Confidence 99999999999999987654 4445566665543
No 101
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.29 E-value=6.2e-11 Score=104.51 Aligned_cols=138 Identities=20% Similarity=0.237 Sum_probs=103.2
Q ss_pred CeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEE-EeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEE
Q psy5220 121 NLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCI-TATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFI 199 (286)
Q Consensus 121 G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l-~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~I 199 (286)
+..|+++-.+ |.++...++.+.+.++.|.+.+...|+| .||+|..+..+ ..++.. +...++|+|
T Consensus 7 ~~~V~vI~i~-----g~I~~~~~~~l~~~l~~a~~~~~~~Ivl~inspGG~v~~~-------~~i~~~---i~~~~~PVi 71 (230)
T 3viv_A 7 KNIVYVAQIK-----GQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRADAM-------MNIVQR---IQQSKIPVI 71 (230)
T ss_dssp CCEEEEEEEE-----SCBCHHHHHHHHHHHHHHHHTTCSEEEEEEEBSCEEHHHH-------HHHHHH---HHTCSSCEE
T ss_pred CCeEEEEEEe-----CEECHHHHHHHHHHHHHHhcCCCCEEEEEEeCCCcCHHHH-------HHHHHH---HHhCCCCEE
Confidence 3456666665 8999999999999999987766655555 78999776432 234333 345799999
Q ss_pred EEE---cCCcchhhhhhccccccEEEEcCCcEEEeeChhh-------------------------hhhhhhcc-------
Q psy5220 200 SVL---TNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-------------------------IKNTVKEK------- 244 (286)
Q Consensus 200 svv---~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-------------------------i~~~~g~~------- 244 (286)
+.| .|.|.|+|++ ++++||+++|.|+++++..+|.. +.+.+|+.
T Consensus 72 a~v~p~~G~AasaG~~-ia~a~d~~~a~p~a~ig~~~p~~~~~~~G~~~~~~~k~~~~~~~~~~~la~~~Gr~~~~a~~~ 150 (230)
T 3viv_A 72 IYVYPPGASAASAGTY-IALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEF 150 (230)
T ss_dssp EEECSTTCEEETHHHH-HHHTSSEEEECTTCEEECCCEEEEECTTSCEEECCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred EEEecCCCEEhHHHHH-HHHhcCceeECCCCEEEeccceecCCCCCCchHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999 9999999975 67889999999999999887752 12234432
Q ss_pred C-CCCCCCHHHHHHcCccceEeCch-hHHHHH
Q psy5220 245 L-PDGFQSSEFLLKKGALDMIIDRR-KLRFKI 274 (286)
Q Consensus 245 l-~~~~~~A~~~~~~G~vD~Vv~~~-e~~~~l 274 (286)
+ .+.+.+|+++.+.|+||.|+++. ++.+.+
T Consensus 151 ~~~~~~ltA~EAle~GliD~V~~~~~~ll~~~ 182 (230)
T 3viv_A 151 ITKDLSLTPEEALKYGVIEVVARDINELLKKS 182 (230)
T ss_dssp HHTCCEECHHHHHHTTSCSEECSSHHHHHHHH
T ss_pred HhcCCeecHHHHHHcCCceEecCCHHHHHHHh
Confidence 1 25568999999999999999873 665554
No 102
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=99.28 E-value=1.3e-11 Score=118.26 Aligned_cols=161 Identities=10% Similarity=0.129 Sum_probs=115.6
Q ss_pred cCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeC--------C------Ccchhhch------Hh-
Q psy5220 120 MNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITAT--------G------GARMQEGL------LS- 177 (286)
Q Consensus 120 ~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~ds--------g------Ga~i~Eg~------~~- 177 (286)
+|. |+++..|.--..++++..+.+.+..+++.+. +..+.+|+|..+ | |+++.+-. ..
T Consensus 174 ~~g-Va~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~~~~~~~~ 252 (440)
T 2np9_A 174 RDG-VARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDF 252 (440)
T ss_dssp ETT-EEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCTTTT
T ss_pred ECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhccCcchhhh
Confidence 443 6677776655679999999999999999875 567999999984 3 45664410 00
Q ss_pred -HHH-HHHHHHHHHHH------------hcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-------
Q psy5220 178 -LMQ-MAKTTAILTKL------------SKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV------- 236 (286)
Q Consensus 178 -l~~-~~~~~~a~~~l------------~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v------- 236 (286)
+.. ...+...+..+ .+.++|+|++|.|+|+|||. .++++||++||.++|+|++....+
T Consensus 253 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~-eLALaCDirIAae~A~Fglpev~lGl~P~~g 331 (440)
T 2np9_A 253 LMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGA-QLLLVFDRVLASSDAYFSLPAAKEGIIPGAA 331 (440)
T ss_dssp HHHHHHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHHH-HHGGGCSEEEEETTCEEECCCTTTCCCCTTH
T ss_pred hhHHHHHHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCcccccch-HHHhhCCEEEEcCCCEEECchhccCcCcchH
Confidence 000 00111112222 35789999999999999995 588999999999999999874432
Q ss_pred ---hhhhhhcc------CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHHHHh
Q psy5220 237 ---IKNTVKEK------LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLALLQ 282 (286)
Q Consensus 237 ---i~~~~g~~------l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~ 282 (286)
+.+.+|.. ++.+..+|+.+.+.|+||.||+++++.+.+.+++..++
T Consensus 332 ~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la 386 (440)
T 2np9_A 332 NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLD 386 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhC
Confidence 33344432 34667889999999999999999888888877776553
No 103
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.27 E-value=9.1e-11 Score=119.02 Aligned_cols=159 Identities=16% Similarity=0.233 Sum_probs=119.3
Q ss_pred EEEEEEcCcc-cccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCC------Ccchhhch-----H--hHHHH-HHHHHH
Q psy5220 124 LVVAVFEFEF-MGGSMGSVVGERFIQGAQISL-EQKIPFVCITATG------GARMQEGL-----L--SLMQM-AKTTAI 187 (286)
Q Consensus 124 v~v~a~d~~~-~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsg------Ga~i~Eg~-----~--~l~~~-~~~~~a 187 (286)
|+++..|.-- ..++++.+..+.+.++++.+. +..+.+|+|+. | |+++.+-. . ....+ ..+...
T Consensus 17 va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 95 (715)
T 1wdk_A 17 IVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDAELIAGNLEANKI 95 (715)
T ss_dssp EEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 6666666554 679999999999999999875 56799999987 4 45664410 0 11111 122234
Q ss_pred HHHHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCC
Q psy5220 188 LTKLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQ 250 (286)
Q Consensus 188 ~~~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~ 250 (286)
+.++.+.++|+|++|.|.|+|||. .++++||+++|.++|+|++....+ +.+.+|.. ++.+..
T Consensus 96 ~~~l~~~~kPvIAav~G~a~GgG~-elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~A~~l~ltG~~~ 174 (715)
T 1wdk_A 96 FSDFEDLNVPTVAAINGIALGGGL-EMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKEN 174 (715)
T ss_dssp HHHHHTCSSCEEEEECSCEETHHH-HHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred HHHHHhCCCCEEEEECCEeeHHHH-HHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCC
Confidence 566778899999999999999995 588999999999999998863322 33444432 346678
Q ss_pred CHHHHHHcCccceEeCchhHHHHHHHHHHHHhcC
Q psy5220 251 SSEFLLKKGALDMIIDRRKLRFKIANLLALLQKK 284 (286)
Q Consensus 251 ~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~~ 284 (286)
+|+.+++.|+||.|++++++.+...++++.+...
T Consensus 175 ~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 208 (715)
T 1wdk_A 175 RAEDALKVSAVDAVVTADKLGAAALDLIKRAISG 208 (715)
T ss_dssp EHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTT
T ss_pred CHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhc
Confidence 8999999999999999889999999888877543
No 104
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.15 E-value=9.5e-11 Score=119.06 Aligned_cols=158 Identities=15% Similarity=0.107 Sum_probs=114.3
Q ss_pred EEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeC-----CCcchhhchHhH-------HHH-HHHHHHHH
Q psy5220 124 LVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCITAT-----GGARMQEGLLSL-------MQM-AKTTAILT 189 (286)
Q Consensus 124 v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~ds-----gGa~i~Eg~~~l-------~~~-~~~~~a~~ 189 (286)
|+++..|.- ..++++.++.+.+.++++.+. +..+.+|+|+.. .|+++.+-.... ..+ ......+.
T Consensus 18 va~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltgg~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (725)
T 2wtb_A 18 VAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITD 96 (725)
T ss_dssp EEEEEEECT-TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEESSSCCBCSSCC------------CCSSSHHHHHCCCC
T ss_pred EEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhcccchhhhhHHHHHHHHHHHHH
Confidence 666666555 689999999999999999885 567999999872 245664410000 000 11111233
Q ss_pred HHhcCCCCEEEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-----------hhhhhhcc------CCCCCCCH
Q psy5220 190 KLSKKKIPFISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-----------IKNTVKEK------LPDGFQSS 252 (286)
Q Consensus 190 ~l~~~~vP~Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-----------i~~~~g~~------l~~~~~~A 252 (286)
++.+.++|+|++|.|.|+|||. .++++||++||.++|+|++....+ +.+.+|.. ++.+..+|
T Consensus 97 ~l~~~~kPvIAav~G~a~GgG~-elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~~A~~l~ltG~~~~a 175 (725)
T 2wtb_A 97 LLEAARKPSVAAIDGLALGGGL-ELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKA 175 (725)
T ss_dssp CCCTSSSCEEEEECSEEETHHH-HHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEH
T ss_pred HHHhCcCcEEEEECCccCcccH-HHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHHHHHHHHHcCCCCCH
Confidence 4667899999999999999995 588899999999999998863322 34444432 34667889
Q ss_pred HHHHHcCccceEeCchhHHHHHHHHHHHHhc
Q psy5220 253 EFLLKKGALDMIIDRRKLRFKIANLLALLQK 283 (286)
Q Consensus 253 ~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~~ 283 (286)
+.+++.|+||.|++++++.+...++++.+..
T Consensus 176 ~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~ 206 (725)
T 2wtb_A 176 EEGHSLGLIDAVVPPAELVTTARRWALDIVG 206 (725)
T ss_dssp HHHHHHTSCSEECCTTTHHHHHHHHHHHHHT
T ss_pred HHHHHCCccceEcChhHHHHHHHHHHHHHHh
Confidence 9999999999999988898888888887754
No 105
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.01 E-value=2.5e-09 Score=94.70 Aligned_cols=130 Identities=13% Similarity=0.111 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHH-hCCCcEEEE-EeCCCcchhhchHhHHHHHHHHHHHHHHhc-CCCCEEEEEcCCcchhhhhhccccc
Q psy5220 142 VGERFIQGAQISL-EQKIPFVCI-TATGGARMQEGLLSLMQMAKTTAILTKLSK-KKIPFISVLTNPTMGGVSASFAFMG 218 (286)
Q Consensus 142 ~~~K~~r~~~~A~-~~~iPlV~l-~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~-~~vP~Isvv~g~~~GGg~~s~a~~~ 218 (286)
..+.+.++++.|. +.++..|+| .+++|+.+.+. ..+...+.++.+ .++|+|+.+.|.|.|||++ ++++|
T Consensus 30 ~~~~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~~-------~~i~~~l~~~~~~~~kPVia~v~g~a~~gG~~-lA~a~ 101 (240)
T 3rst_A 30 NHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYES-------AEIHKKLEEIKKETKKPIYVSMGSMAASGGYY-ISTAA 101 (240)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEEEEEECCBCHHHH-------HHHHHHHHHHHHHHCCCEEEEEEEEEETHHHH-HHTTS
T ss_pred CHHHHHHHHHHHHhCCCcEEEEEEecCCCCCHHHH-------HHHHHHHHHHHHhCCCeEEEEECCeehHhHHH-HHHhC
Confidence 3577888888775 667887777 56888777432 234445556655 6899999999999999964 78899
Q ss_pred cEEEEcCCcEEEeeChhh----hh-------------------hh-------------------------------hhcc
Q psy5220 219 DIVIAEPGALIGFAGPRV----IK-------------------NT-------------------------------VKEK 244 (286)
Q Consensus 219 d~via~~~A~i~~~gp~v----i~-------------------~~-------------------------------~g~~ 244 (286)
|+++|.|++.+++.|... .+ .. .++.
T Consensus 102 D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~ 181 (240)
T 3rst_A 102 DKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRG 181 (240)
T ss_dssp SEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999986521 00 00 0001
Q ss_pred ---------CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHHH
Q psy5220 245 ---------LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLLA 279 (286)
Q Consensus 245 ---------l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~ 279 (286)
+..+..+++.+.+.|+||.|...+++.+.+.+++.
T Consensus 182 l~~~~~~~~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~~~~ 225 (240)
T 3rst_A 182 MPKAEVKKIADGRVYDGRQAKKLNLVDELGFYDDTITAMKKDHK 225 (240)
T ss_dssp CCHHHHHHHCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHHHCG
T ss_pred CCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHHHHHHHHHhC
Confidence 11233568899999999999998899888887764
No 106
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.00 E-value=1.6e-09 Score=107.72 Aligned_cols=148 Identities=16% Similarity=0.146 Sum_probs=105.1
Q ss_pred eEEEEEEcCcccccC--CChHHHHHHHHHHHHHHh-CCCcEEEE-EeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCE
Q psy5220 123 PLVVAVFEFEFMGGS--MGSVVGERFIQGAQISLE-QKIPFVCI-TATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPF 198 (286)
Q Consensus 123 ~v~v~a~d~~~~gGs--~~~~~~~K~~r~~~~A~~-~~iPlV~l-~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~ 198 (286)
.|+++-.+.....++ ++....+.+.+.++.|.+ .++..|+| .+|+|+.+.+. ..+...+.++...++|+
T Consensus 302 ~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~spGG~~~~~-------~~i~~~i~~l~~~~kPV 374 (593)
T 3bf0_A 302 SIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS-------EVIRAELAAARAAGKPV 374 (593)
T ss_dssp EEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEEEEECHHHH-------HHHHHHHHHHHHTTCCE
T ss_pred CEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecCCCCCHHHH-------HHHHHHHHHHHhCCCCE
Confidence 366666665544455 567778899999998864 47777777 56888776432 22334456666679999
Q ss_pred EEEEcCCcchhhhhhccccccEEEEcCCcEEEeeChhh-------------h----------------------------
Q psy5220 199 ISVLTNPTMGGVSASFAFMGDIVIAEPGALIGFAGPRV-------------I---------------------------- 237 (286)
Q Consensus 199 Isvv~g~~~GGg~~s~a~~~d~via~~~A~i~~~gp~v-------------i---------------------------- 237 (286)
|+.|.|.|.|||++ ++++||+++|.|++.++..|+.. +
T Consensus 375 ia~v~g~AasgG~~-iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~~~~~l~ 453 (593)
T 3bf0_A 375 VVSMGGMAASGGYW-ISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQ 453 (593)
T ss_dssp EEEEEEEEETHHHH-TTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHHHHHH
T ss_pred EEEECCChHHHHHH-HHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHHHHHHHH
Confidence 99999999999975 78899999999999999876310 0
Q ss_pred ----------hhhhh--cc---------CCCCCCCHHHHHHcCccceEeCchhHHHHHHHHH
Q psy5220 238 ----------KNTVK--EK---------LPDGFQSSEFLLKKGALDMIIDRRKLRFKIANLL 278 (286)
Q Consensus 238 ----------~~~~g--~~---------l~~~~~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L 278 (286)
.+.++ +. ++.+..+|+.+.+.|+||.|++.+++.+.+.+++
T Consensus 454 ~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a 515 (593)
T 3bf0_A 454 LSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELA 515 (593)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHc
Confidence 00011 10 2234457999999999999998888887776654
No 107
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=98.84 E-value=1.6e-08 Score=88.27 Aligned_cols=124 Identities=14% Similarity=0.091 Sum_probs=91.8
Q ss_pred ccCCChHHHHHHHHHHHHHHh--CCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhhh
Q psy5220 135 GGSMGSVVGERFIQGAQISLE--QKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVSA 212 (286)
Q Consensus 135 gGs~~~~~~~K~~r~~~~A~~--~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~ 212 (286)
+|.++...++.+.+.++.+.+ ..-+|++..+|+|..+..+ -.++..+. ..+.|+++++.|.|.++|++
T Consensus 51 ~g~I~~~~a~~i~~~L~~l~~~~~~k~I~l~InSPGG~v~ag-------~~I~~~i~---~~~~pV~t~v~G~AaS~G~~ 120 (218)
T 1y7o_A 51 TGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAG-------LAIVDTMN---FIKADVQTIVMGMAASMGTV 120 (218)
T ss_dssp ESCBCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHHH-------HHHHHHHH---HSSSCEEEEEEEEEETHHHH
T ss_pred eCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHH-------HHHHHHHH---hcCCCEEEEEccEeHHHHHH
Confidence 477888999999999987643 3568999999999776443 22333333 34789999999999999976
Q ss_pred hccccccE--EEEcCCcEEEeeChhhh----------------------------hhhhhcc-------C-CCCCCCHHH
Q psy5220 213 SFAFMGDI--VIAEPGALIGFAGPRVI----------------------------KNTVKEK-------L-PDGFQSSEF 254 (286)
Q Consensus 213 s~a~~~d~--via~~~A~i~~~gp~vi----------------------------~~~~g~~-------l-~~~~~~A~~ 254 (286)
++++||. ++|.|++.+++..|... .+.+|.. + .+.+.+|++
T Consensus 121 -Ia~a~d~g~r~a~p~a~igih~p~~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~~~~~~ta~E 199 (218)
T 1y7o_A 121 -IASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQE 199 (218)
T ss_dssp -HHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCCCBCHHH
T ss_pred -HHHcCCcCcEEEcCCcEEEEecccccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCCEEcHHH
Confidence 6678999 99999999998766421 1122321 1 245678999
Q ss_pred HHHcCccceEeCchh
Q psy5220 255 LLKKGALDMIIDRRK 269 (286)
Q Consensus 255 ~~~~G~vD~Vv~~~e 269 (286)
+.+.|+||.|+++++
T Consensus 200 A~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 200 TLEYGFIDEIMANNS 214 (218)
T ss_dssp HHHHTSCSEECCCC-
T ss_pred HHHCCCCcEEcCcCC
Confidence 999999999998875
No 108
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.68 E-value=9.4e-08 Score=82.81 Aligned_cols=129 Identities=13% Similarity=0.069 Sum_probs=90.1
Q ss_pred cccCCChHHHHHHHHHHHHHH--hCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhh
Q psy5220 134 MGGSMGSVVGERFIQGAQISL--EQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVS 211 (286)
Q Consensus 134 ~gGs~~~~~~~K~~r~~~~A~--~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~ 211 (286)
+.|.++...++.+.+.+..+. ...-+|++..||||..+..+ -.++..+.. .+.|+++++.|-|.++|+
T Consensus 32 l~G~I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~-------~~I~~~i~~---~~~pV~~~v~g~AaS~g~ 101 (208)
T 2cby_A 32 LGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAG-------MAIYDTMVL---APCDIATYAMGMAASMGE 101 (208)
T ss_dssp ECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHH-------HHHHHHHHH---CSSCEEEEEEEEEETHHH
T ss_pred EcCEECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHH-------HHHHHHHHh---cCCCEEEEECcEeHHHHH
Confidence 357788889999999998775 34568999999999876432 234444443 468999999999999997
Q ss_pred hhccccccE--EEEcCCcEEEeeChhhh--------------------------hhhhhcc-------CC-CCCCCHHHH
Q psy5220 212 ASFAFMGDI--VIAEPGALIGFAGPRVI--------------------------KNTVKEK-------LP-DGFQSSEFL 255 (286)
Q Consensus 212 ~s~a~~~d~--via~~~A~i~~~gp~vi--------------------------~~~~g~~-------l~-~~~~~A~~~ 255 (286)
+ .+++||. ++|.|++.+++..|... .+.+|.. +. +.+.+++.+
T Consensus 102 ~-Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta~eA 180 (208)
T 2cby_A 102 F-LLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 (208)
T ss_dssp H-HHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEEHHHH
T ss_pred H-HHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCcEEcHHHH
Confidence 6 5568998 89999999999877521 0111211 11 335689999
Q ss_pred HHcCccceEeCch-hHHHH
Q psy5220 256 LKKGALDMIIDRR-KLRFK 273 (286)
Q Consensus 256 ~~~G~vD~Vv~~~-e~~~~ 273 (286)
.+.|+||.|.++. ++.+.
T Consensus 181 ~e~GLvD~i~~~~~~ll~~ 199 (208)
T 2cby_A 181 LEYGFVDHIITRAHVNGEA 199 (208)
T ss_dssp HHHTSCSEECSCC------
T ss_pred HHcCCCcEecCchHHHHHH
Confidence 9999999999875 54433
No 109
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.45 E-value=5.4e-07 Score=78.46 Aligned_cols=124 Identities=12% Similarity=0.078 Sum_probs=89.1
Q ss_pred cccCCChHHHHHHHHHHHHHH-hCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhhh
Q psy5220 134 MGGSMGSVVGERFIQGAQISL-EQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVSA 212 (286)
Q Consensus 134 ~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~ 212 (286)
++|.++...+..+.+.+..+. +..-||++..||+|..+.++ -.+...+.. .+.|+++++.|-|.++|++
T Consensus 44 l~G~I~~~~a~~i~~~L~~l~~~~~k~I~l~INSPGGsv~a~-------~~I~~~i~~---~~~pV~t~v~g~AAS~g~~ 113 (215)
T 2f6i_A 44 LTDEINKKTADELISQLLYLDNINHNDIKIYINSPGGSINEG-------LAILDIFNY---IKSDIQTISFGLVASMASV 113 (215)
T ss_dssp ECSCBCHHHHHHHHHHHHHHHHHCCSCEEEEEEECCBCHHHH-------HHHHHHHHH---SSSCEEEEEEEEECHHHHH
T ss_pred EccEECHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHH-------HHHHHHHHh---cCCCEEEEEeeEhHhHHHH
Confidence 347777888888888887653 33389999999999877443 234344443 4679999999999999976
Q ss_pred hccccccE--EEEcCCcEEEeeChhhhh--------------------------hhhhcc-------CC-CCCCCHHHHH
Q psy5220 213 SFAFMGDI--VIAEPGALIGFAGPRVIK--------------------------NTVKEK-------LP-DGFQSSEFLL 256 (286)
Q Consensus 213 s~a~~~d~--via~~~A~i~~~gp~vi~--------------------------~~~g~~-------l~-~~~~~A~~~~ 256 (286)
.++++|. ++|.|++.+++.-|.... ..+|.. +. +.+.+++++.
T Consensus 114 -Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~~lta~eA~ 192 (215)
T 2f6i_A 114 -ILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAK 192 (215)
T ss_dssp -HHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEECHHHHH
T ss_pred -HHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCeecCHHHHH
Confidence 4568999 999999999987664310 001111 11 2246899999
Q ss_pred HcCccceEeCch
Q psy5220 257 KKGALDMIIDRR 268 (286)
Q Consensus 257 ~~G~vD~Vv~~~ 268 (286)
+.|+||.|+++.
T Consensus 193 e~GLiD~I~~~~ 204 (215)
T 2f6i_A 193 QYGIIDEVIETK 204 (215)
T ss_dssp HHTSCSEECCCS
T ss_pred HCCCCCEecCCc
Confidence 999999999775
No 110
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=98.44 E-value=6.1e-07 Score=77.37 Aligned_cols=126 Identities=14% Similarity=0.129 Sum_probs=91.1
Q ss_pred cccCCChHHHHHHHHHHHHHH-h-CCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhh
Q psy5220 134 MGGSMGSVVGERFIQGAQISL-E-QKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVS 211 (286)
Q Consensus 134 ~gGs~~~~~~~K~~r~~~~A~-~-~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~ 211 (286)
++|.++...++.+.+.+..+. + ..-++++..+|+|..+.++. .+...+.. .+.|+++++.|-|.++|+
T Consensus 35 l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpGG~v~~~~-------~I~~~i~~---~~~~v~t~~~G~AaS~g~ 104 (201)
T 3p2l_A 35 LNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGM-------GVYDTMQF---IKPDVSTICIGLAASMGS 104 (201)
T ss_dssp EESCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHH-------HHHHHHHH---SSSCEEEEEEEEEETHHH
T ss_pred EcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHH-------HHHHHHHH---hCCCeEEEEcCEehhHHH
Confidence 468888999999998888764 3 35789999999998774432 23333333 468999999999999987
Q ss_pred hhccccccE--EEEcCCcEEEeeChhh--------hh------------------hhhhcc-------CC-CCCCCHHHH
Q psy5220 212 ASFAFMGDI--VIAEPGALIGFAGPRV--------IK------------------NTVKEK-------LP-DGFQSSEFL 255 (286)
Q Consensus 212 ~s~a~~~d~--via~~~A~i~~~gp~v--------i~------------------~~~g~~-------l~-~~~~~A~~~ 255 (286)
+ +++++|. ++|.|++.+.+.-|.. +. ..+|+. +. +.+.+|+++
T Consensus 105 ~-i~~ag~~g~r~~~p~a~imiH~p~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~~~lta~EA 183 (201)
T 3p2l_A 105 L-LLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEA 183 (201)
T ss_dssp H-HHHTSSTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHH
T ss_pred H-HHHcCccCCEEEcCCCeEEEeccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcCeeecHHHH
Confidence 6 4567887 9999999998887742 00 011221 22 234689999
Q ss_pred HHcCccceEeCch-hH
Q psy5220 256 LKKGALDMIIDRR-KL 270 (286)
Q Consensus 256 ~~~G~vD~Vv~~~-e~ 270 (286)
.+.|+||.|+++. |+
T Consensus 184 ~e~GliD~I~~~~~~l 199 (201)
T 3p2l_A 184 KAYGLIDHVIESREAI 199 (201)
T ss_dssp HHHTSCSEECCCSCC-
T ss_pred HHcCCccEecCCHHHh
Confidence 9999999999875 54
No 111
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.41 E-value=1.4e-06 Score=75.17 Aligned_cols=124 Identities=14% Similarity=0.138 Sum_probs=91.2
Q ss_pred cccCCChHHHHHHHHHHHHHHh--CCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhh
Q psy5220 134 MGGSMGSVVGERFIQGAQISLE--QKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVS 211 (286)
Q Consensus 134 ~gGs~~~~~~~K~~r~~~~A~~--~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~ 211 (286)
++|.++...+..+.+.+..+.. ..-++++..||+|..+..+. .+...+. ..+.|+++++.|.|.++|+
T Consensus 32 l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~~~~-------~I~~~i~---~~~~~V~t~~~G~AaSag~ 101 (203)
T 3qwd_A 32 LGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF-------AIYDTIQ---HIKPDVQTICIGMAASMGS 101 (203)
T ss_dssp ECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHH-------HHHHHHH---HSSSCEEEEEEEEEETHHH
T ss_pred EcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHH-------HHHHHHH---HhcCCcEEEEeeeehhHHH
Confidence 4688999999999998888753 35689999999998774432 2333333 3478999999999999887
Q ss_pred hhcccccc--EEEEcCCcEEEeeChhh--------hh------------------hhhhcc-------CC-CCCCCHHHH
Q psy5220 212 ASFAFMGD--IVIAEPGALIGFAGPRV--------IK------------------NTVKEK-------LP-DGFQSSEFL 255 (286)
Q Consensus 212 ~s~a~~~d--~via~~~A~i~~~gp~v--------i~------------------~~~g~~-------l~-~~~~~A~~~ 255 (286)
+ +++++| .++|.|+|.+.+.-|.. +. +.+|+. +. +.+.+|+++
T Consensus 102 ~-i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d~~lta~EA 180 (203)
T 3qwd_A 102 F-LLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEA 180 (203)
T ss_dssp H-HHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSCCCEEHHHH
T ss_pred H-HHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcCceecHHHH
Confidence 6 456788 59999999998875542 11 011221 12 346789999
Q ss_pred HHcCccceEeCch
Q psy5220 256 LKKGALDMIIDRR 268 (286)
Q Consensus 256 ~~~G~vD~Vv~~~ 268 (286)
.+.|+||.|+.+.
T Consensus 181 ~e~GliD~I~~~~ 193 (203)
T 3qwd_A 181 KEYGLIDEVMVPE 193 (203)
T ss_dssp HHHTSCSEECCCC
T ss_pred HHcCCcCEecCCc
Confidence 9999999999875
No 112
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.41 E-value=1.1e-06 Score=75.06 Aligned_cols=124 Identities=11% Similarity=0.086 Sum_probs=90.0
Q ss_pred cccCCChHHHHHHHHHHHHHH--hCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhh
Q psy5220 134 MGGSMGSVVGERFIQGAQISL--EQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVS 211 (286)
Q Consensus 134 ~gGs~~~~~~~K~~r~~~~A~--~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~ 211 (286)
++|.++...++.+.+.++.+. +..-++++..||+|..+.++ -.+...+.. .+.|+++++.|-|.++|+
T Consensus 31 l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~a~-------~~I~~~i~~---~~~pV~~~v~g~AaS~g~ 100 (193)
T 1yg6_A 31 LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG-------MSIYDTMQF---IKPDVSTICMGQAASMGA 100 (193)
T ss_dssp EESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHH-------HHHHHHHHH---SSSCEEEEEEEEEETHHH
T ss_pred EcCEEcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHH-------HHHHHHHHh---cCCCEEEEEeeeHHHHHH
Confidence 357888889999999888764 34578999999999877443 234344443 468999999999999997
Q ss_pred hhccccccE--EEEcCCcEEEeeChhhh--------h------------------hhhhcc-------CC-CCCCCHHHH
Q psy5220 212 ASFAFMGDI--VIAEPGALIGFAGPRVI--------K------------------NTVKEK-------LP-DGFQSSEFL 255 (286)
Q Consensus 212 ~s~a~~~d~--via~~~A~i~~~gp~vi--------~------------------~~~g~~-------l~-~~~~~A~~~ 255 (286)
+ .++++|. ++|.|++.+++..|... . +.+|.. +. +.+.+++++
T Consensus 101 ~-Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta~eA 179 (193)
T 1yg6_A 101 F-LLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 179 (193)
T ss_dssp H-HHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHH
T ss_pred H-HHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCeEEcHHHH
Confidence 6 4568898 99999999998877531 0 011111 12 224589999
Q ss_pred HHcCccceEeCch
Q psy5220 256 LKKGALDMIIDRR 268 (286)
Q Consensus 256 ~~~G~vD~Vv~~~ 268 (286)
.+.|+||.|+.+.
T Consensus 180 ~~~GliD~i~~~~ 192 (193)
T 1yg6_A 180 VEYGLVDSILTHR 192 (193)
T ss_dssp HHHTSSSEECCCC
T ss_pred HHcCCCCEecCCC
Confidence 9999999998753
No 113
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.38 E-value=1.6e-06 Score=78.19 Aligned_cols=129 Identities=16% Similarity=0.095 Sum_probs=90.7
Q ss_pred cccCCChHHHHHHHHHHHHH--HhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhh
Q psy5220 134 MGGSMGSVVGERFIQGAQIS--LEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVS 211 (286)
Q Consensus 134 ~gGs~~~~~~~K~~r~~~~A--~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~ 211 (286)
++|.++...+..+.+.+..+ .+..-+|++..||+|..+..+. .++..+.. ...|+++++.|-|.++|+
T Consensus 87 l~G~I~d~~a~~iiaqL~~l~~ed~~k~I~L~INSPGGsV~ag~-------aIyd~I~~---~k~pV~t~v~G~AASaG~ 156 (277)
T 1tg6_A 87 VMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGL-------AIYDTMQY---ILNPICTWCVGQAASMGS 156 (277)
T ss_dssp EESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHH-------HHHHHHHH---SCSCEEEEEEEEEETHHH
T ss_pred EcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHH-------HHHHHHHh---cCCCEEEEEccEeHHHHH
Confidence 45788888999998888764 3456799999999998774432 33333443 368999999999999997
Q ss_pred hhccccccE--EEEcCCcEEEeeChhhh--------h------------------hhhhcc-------CC-CCCCCHHHH
Q psy5220 212 ASFAFMGDI--VIAEPGALIGFAGPRVI--------K------------------NTVKEK-------LP-DGFQSSEFL 255 (286)
Q Consensus 212 ~s~a~~~d~--via~~~A~i~~~gp~vi--------~------------------~~~g~~-------l~-~~~~~A~~~ 255 (286)
+ +++++|. ++|.|++.+++..|... . ..+|.. +. +.+.+++++
T Consensus 157 ~-Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~~lta~EA 235 (277)
T 1tg6_A 157 L-LLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEA 235 (277)
T ss_dssp H-HHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEECHHHH
T ss_pred H-HHHCCCcCCEEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcccCHHHH
Confidence 6 4567888 99999999999877421 0 011211 11 235689999
Q ss_pred HHcCccceEeCch-hHHHH
Q psy5220 256 LKKGALDMIIDRR-KLRFK 273 (286)
Q Consensus 256 ~~~G~vD~Vv~~~-e~~~~ 273 (286)
.+.|+||.|+... ++.+.
T Consensus 236 le~GLID~I~~~~~~~~~~ 254 (277)
T 1tg6_A 236 QEFGILDKVLVHPPQDGED 254 (277)
T ss_dssp HHHTSCSEECSSCC-----
T ss_pred HHCCCCCEecCcchhhccc
Confidence 9999999999875 55443
No 114
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=98.13 E-value=1.4e-05 Score=69.03 Aligned_cols=125 Identities=10% Similarity=0.152 Sum_probs=87.5
Q ss_pred ccccCCChHHHHHHHHHHHHHH--hCCCcEEEEEeCCC----------cchhhchHhHHHHHHHHHHHHHHhcCCCCEEE
Q psy5220 133 FMGGSMGSVVGERFIQGAQISL--EQKIPFVCITATGG----------ARMQEGLLSLMQMAKTTAILTKLSKKKIPFIS 200 (286)
Q Consensus 133 ~~gGs~~~~~~~K~~r~~~~A~--~~~iPlV~l~dsgG----------a~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Is 200 (286)
|++|.++...+..+..-+-... +..-||.+..+|+| ..+.+|. .++..+. ..+.|+.+
T Consensus 32 fl~~~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v~agl-------aIyd~m~---~~~~~V~t 101 (205)
T 4gm2_A 32 FLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVI-------SIVDVIN---YISSDVYT 101 (205)
T ss_dssp EECSCCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHHHHHH-------HHHHHHH---HSSSCEEE
T ss_pred EECCEEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCHHHHH-------HHHHHHH---hcCCCEEE
Confidence 4679999999999877766543 44679999999999 4443332 2333333 34689999
Q ss_pred EEcCCcchhhhhhcccccc--EEEEcCCcEEEeeChhhh---------h------------------hhhhcc-------
Q psy5220 201 VLTNPTMGGVSASFAFMGD--IVIAEPGALIGFAGPRVI---------K------------------NTVKEK------- 244 (286)
Q Consensus 201 vv~g~~~GGg~~s~a~~~d--~via~~~A~i~~~gp~vi---------~------------------~~~g~~------- 244 (286)
++.|-|.+.|+.. +++++ -+++.|+|++.+--|..- . .-+|+.
T Consensus 102 ~~~G~AaS~as~i-l~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~ 180 (205)
T 4gm2_A 102 YCLGKAYGIACIL-ASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVISNV 180 (205)
T ss_dssp EEEEEEETHHHHH-HTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred EEEeeehhHHHHH-HhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 9999999998764 45677 489999999977655320 0 012221
Q ss_pred CC-CCCCCHHHHHHcCccceEeCch
Q psy5220 245 LP-DGFQSSEFLLKKGALDMIIDRR 268 (286)
Q Consensus 245 l~-~~~~~A~~~~~~G~vD~Vv~~~ 268 (286)
+. +.+.+|+++.+.|+||.|+.+|
T Consensus 181 m~rd~~msa~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 181 LERDKYFNADEAVDFKLIDHILEKE 205 (205)
T ss_dssp TTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred hcCCcccCHHHHHHcCCccEeecCC
Confidence 22 3467899999999999999764
No 115
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.65 E-value=0.00021 Score=70.93 Aligned_cols=87 Identities=13% Similarity=0.089 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHHH-hCCCc-EEEEEeCCC-cchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccc
Q psy5220 140 SVVGERFIQGAQISL-EQKIP-FVCITATGG-ARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAF 216 (286)
Q Consensus 140 ~~~~~K~~r~~~~A~-~~~iP-lV~l~dsgG-a~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~ 216 (286)
....+.+.+.++.|. +.++- |++-.||+| ..+.. ...+..++..++..++|+|+.+.+ +..++ +.+|+
T Consensus 69 ~~~~~~i~~~L~~a~~d~~ik~I~L~inspGgG~v~~-------~~~I~~~i~~~k~~gkpvva~~~~-aas~~-y~lAs 139 (593)
T 3bf0_A 69 ENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPS-------MQYIGKALKEFRDSGKPVYAVGEN-YSQGQ-YYLAS 139 (593)
T ss_dssp EEEHHHHHHHHHHHHHCTTCCCEEEECTEEEECCHHH-------HHHHHHHHHHHHHTTCCEEEEESC-EEHHH-HHHHT
T ss_pred ccCHHHHHHHHHHHHhCCCceEEEEEeCCCCCCcHHH-------HHHHHHHHHHHHhcCCeEEEEEcc-chhHH-HHHHH
Confidence 456788888888875 55665 555578887 55522 244556677777678999998654 33334 44677
Q ss_pred cccEEEEcCCcEEEeeChh
Q psy5220 217 MGDIVIAEPGALIGFAGPR 235 (286)
Q Consensus 217 ~~d~via~~~A~i~~~gp~ 235 (286)
.+|-+++.|++.+++.||.
T Consensus 140 aad~i~~~P~~~vg~~g~~ 158 (593)
T 3bf0_A 140 FANKIWLSPQGVVDLHGFA 158 (593)
T ss_dssp TSSEEEECTTCCEECCCCB
T ss_pred hCCEEEECCCceEEEeccc
Confidence 8999999999999999885
No 116
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=87.52 E-value=0.24 Score=39.43 Aligned_cols=31 Identities=23% Similarity=0.545 Sum_probs=24.8
Q ss_pred hhcccccccccchhhc---cccccccccccCCCC
Q psy5220 28 WIKCLSCKTILYKNDL---KFNQQVCTKCDYHMQ 58 (286)
Q Consensus 28 ~~~c~~c~~~~~~~~l---~~~~~vc~~~~~~~~ 58 (286)
..-||.|+.++|.++- ..+.++|++|+|...
T Consensus 24 ~~FCPeCgNmL~pked~~~~~l~~~CrtCgY~~~ 57 (133)
T 3qt1_I 24 FRFCRDCNNMLYPREDKENNRLLFECRTCSYVEE 57 (133)
T ss_dssp CCBCTTTCCBCBCCBCTTTCCBCCBCSSSCCBCC
T ss_pred CeeCCCCCCEeeECccCCCceeEEECCCCCCcEE
Confidence 4679999999998753 235799999999754
No 117
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=85.31 E-value=0.24 Score=33.94 Aligned_cols=24 Identities=29% Similarity=0.771 Sum_probs=18.7
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
-.++||+|++.. ....+||.||++
T Consensus 29 ~l~~c~~cGe~~------~~H~vc~~CG~Y 52 (60)
T 3v2d_5 29 TLVPCPECKAMK------PPHTVCPECGYY 52 (60)
T ss_dssp CCEECTTTCCEE------CTTSCCTTTCEE
T ss_pred ceeECCCCCCee------cceEEcCCCCcC
Confidence 467999999743 346899999976
No 118
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=84.79 E-value=0.21 Score=39.36 Aligned_cols=28 Identities=21% Similarity=0.418 Sum_probs=21.0
Q ss_pred hcccccccccchhhccccccccccccCCCC
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYHMQ 58 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~ 58 (286)
..||+|+....++| ..++|||.|.|...
T Consensus 28 P~CP~C~seytYeD--g~l~vCPeC~hEW~ 55 (138)
T 2akl_A 28 PPCPQCNSEYTYED--GALLVCPECAHEWS 55 (138)
T ss_dssp CCCTTTCCCCCEEC--SSSEEETTTTEEEC
T ss_pred CCCCCCCCcceEec--CCeEECCccccccC
Confidence 48999996544443 46899999999753
No 119
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=80.56 E-value=0.44 Score=36.69 Aligned_cols=32 Identities=25% Similarity=0.694 Sum_probs=24.7
Q ss_pred hcccccccccchhhc---cccccccccccCCCCCC
Q psy5220 29 IKCLSCKTILYKNDL---KFNQQVCTKCDYHMQIK 60 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l---~~~~~vc~~~~~~~~~~ 60 (286)
.-||.|+.++|.++- ..+.++|++|+|...++
T Consensus 5 ~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~~~~ 39 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAA 39 (113)
T ss_dssp CCCSSSCCCCEECCCTTTCCCCEECSSSCCEECCS
T ss_pred eeCcCCCCEeeEcccCCCCeeEEECCCCCCeEEcC
Confidence 359999999998753 23579999999976554
No 120
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=77.98 E-value=0.48 Score=31.11 Aligned_cols=29 Identities=24% Similarity=0.495 Sum_probs=20.4
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
+...||+|+..++-.+ ...-..|++|++-
T Consensus 18 ~~k~CP~CG~~~fm~~-~~~R~~C~kCG~t 46 (50)
T 3j20_Y 18 KNKFCPRCGPGVFMAD-HGDRWACGKCGYT 46 (50)
T ss_dssp SSEECSSSCSSCEEEE-CSSEEECSSSCCE
T ss_pred ecccCCCCCCceEEec-CCCeEECCCCCCE
Confidence 6678999998444332 2356899999863
No 121
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=76.64 E-value=1 Score=29.06 Aligned_cols=28 Identities=25% Similarity=0.615 Sum_probs=20.6
Q ss_pred cccccccccchhhcccc-ccccccccCCC
Q psy5220 30 KCLSCKTILYKNDLKFN-QQVCTKCDYHM 57 (286)
Q Consensus 30 ~c~~c~~~~~~~~l~~~-~~vc~~~~~~~ 57 (286)
+|-+|++.....||+.. .--||.|+++-
T Consensus 5 ~C~rCg~~fs~~el~~lP~IrCpyCGyri 33 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVLPGVRCPYCGYKI 33 (48)
T ss_dssp CCCCTTTTCCCCCSCCCSSSCCTTTCCSC
T ss_pred EeeccCCCccHHHHhhCCCcccCccCcEE
Confidence 68888888888887763 34588888863
No 122
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=76.64 E-value=0.49 Score=36.93 Aligned_cols=32 Identities=22% Similarity=0.481 Sum_probs=24.6
Q ss_pred hcccccccccchhh---ccccccccccccCCCCCC
Q psy5220 29 IKCLSCKTILYKND---LKFNQQVCTKCDYHMQIK 60 (286)
Q Consensus 29 ~~c~~c~~~~~~~~---l~~~~~vc~~~~~~~~~~ 60 (286)
.-||.|+.+||.++ -..+.+.|+.|+|....+
T Consensus 5 ~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~~~~ 39 (122)
T 1twf_I 5 RFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAG 39 (122)
T ss_dssp CBCSSSCCBCEEEEETTTTEEEEECSSSSCEEECS
T ss_pred CcccccCccCcccccCcCCCCEEECCcCCCeeecC
Confidence 46999999999653 234689999999976544
No 123
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=76.45 E-value=0.86 Score=31.10 Aligned_cols=26 Identities=19% Similarity=0.630 Sum_probs=19.6
Q ss_pred chhhhcccccccccchhhccccccccccccCC
Q psy5220 25 KGLWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 25 ~~~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
..-.++||.|++.. .-..+||.|+++
T Consensus 27 ~p~l~~c~~cG~~~------~pH~vc~~CG~Y 52 (60)
T 2zjr_Z 27 APNLTECPQCHGKK------LSHHICPNCGYY 52 (60)
T ss_dssp CCCCEECTTTCCEE------CTTBCCTTTCBS
T ss_pred CCCceECCCCCCEe------CCceEcCCCCcC
Confidence 33557899999762 236899999986
No 124
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=73.81 E-value=0.84 Score=37.69 Aligned_cols=27 Identities=19% Similarity=0.539 Sum_probs=19.0
Q ss_pred hhhhcccccccccchhhccccccccccccCCC
Q psy5220 26 GLWIKCLSCKTILYKNDLKFNQQVCTKCDYHM 57 (286)
Q Consensus 26 ~~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~ 57 (286)
..|+ |+.||.+.. .+ .-.+||.|++..
T Consensus 137 ~~~~-C~~CG~i~~-~~---~p~~CP~Cg~~~ 163 (170)
T 3pwf_A 137 KVYI-CPICGYTAV-DE---APEYCPVCGAPK 163 (170)
T ss_dssp CEEE-CTTTCCEEE-SC---CCSBCTTTCCBG
T ss_pred CeeE-eCCCCCeeC-CC---CCCCCCCCCCCH
Confidence 4675 999996554 33 234999999863
No 125
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=73.48 E-value=1.5 Score=34.90 Aligned_cols=30 Identities=23% Similarity=0.459 Sum_probs=20.1
Q ss_pred hhcccccccccchhh------------------ccccccccccccCCC
Q psy5220 28 WIKCLSCKTILYKND------------------LKFNQQVCTKCDYHM 57 (286)
Q Consensus 28 ~~~c~~c~~~~~~~~------------------l~~~~~vc~~~~~~~ 57 (286)
..+|.+|+.....++ +......||+|+++.
T Consensus 70 ~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~ 117 (139)
T 3a43_A 70 VFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHD 117 (139)
T ss_dssp EEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCC
T ss_pred cEECCCCCCEEecccccccccccccccccccccccccCCcCccccCCc
Confidence 348999997654433 111268899999983
No 126
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=70.45 E-value=0.61 Score=32.98 Aligned_cols=28 Identities=21% Similarity=0.704 Sum_probs=19.4
Q ss_pred hcccccccccchhhccccccccccccCCCCC
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYHMQI 59 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~ 59 (286)
+.|| |+...|.++ ......|| ||...++
T Consensus 5 v~C~-C~~~~~~~~-~~kT~~C~-CG~~~~~ 32 (71)
T 1gh9_A 5 FRCD-CGRALYSRE-GAKTRKCV-CGRTVNV 32 (71)
T ss_dssp EEET-TSCCEEEET-TCSEEEET-TTEEEEC
T ss_pred EECC-CCCEEEEcC-CCcEEECC-CCCeeee
Confidence 4688 888888765 44567788 8776443
No 127
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=70.02 E-value=1.1 Score=28.94 Aligned_cols=28 Identities=32% Similarity=0.695 Sum_probs=19.7
Q ss_pred hccccccc-ccchhhccccccccccccCCC
Q psy5220 29 IKCLSCKT-ILYKNDLKFNQQVCTKCDYHM 57 (286)
Q Consensus 29 ~~c~~c~~-~~~~~~l~~~~~vc~~~~~~~ 57 (286)
.+||.|+. .+.. |-.....+|+.|+.-.
T Consensus 6 ~~CP~C~~~~l~~-d~~~gelvC~~CG~v~ 34 (50)
T 1pft_A 6 KVCPACESAELIY-DPERGEIVCAKCGYVI 34 (50)
T ss_dssp CSCTTTSCCCEEE-ETTTTEEEESSSCCBC
T ss_pred EeCcCCCCcceEE-cCCCCeEECcccCCcc
Confidence 47999986 4433 3345678999998853
No 128
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=69.58 E-value=1.7 Score=33.47 Aligned_cols=28 Identities=25% Similarity=0.586 Sum_probs=20.6
Q ss_pred hhhcccccccccchhhcccccc-ccccccCCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQ-VCTKCDYHM 57 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~-vc~~~~~~~ 57 (286)
..-+|.+|+...... .... .||.|+++.
T Consensus 72 ~~~~C~~CG~~~e~~---~~~~~~CP~Cgs~~ 100 (119)
T 2kdx_A 72 VELECKDCSHVFKPN---ALDYGVCEKCHSKN 100 (119)
T ss_dssp CEEECSSSSCEECSC---CSTTCCCSSSSSCC
T ss_pred ceEEcCCCCCEEeCC---CCCCCcCccccCCC
Confidence 345899999766543 3467 899999883
No 129
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=68.35 E-value=1.5 Score=29.60 Aligned_cols=38 Identities=13% Similarity=0.473 Sum_probs=24.2
Q ss_pred hcccccccccchhhccccccccccccCCCCCCHHHHHHhhcCCCc
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLNNFLDKNN 73 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~~L~D~gs 73 (286)
.+||.|+..-...|..+...+|..|+.-.. +.++|.|+
T Consensus 12 ~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl~-------e~~iD~gp 49 (58)
T 1dl6_A 12 VTCPNHPDAILVEDYRAGDMICPECGLVVG-------DRVIDVGS 49 (58)
T ss_dssp CSBTTBSSSCCEECSSSCCEECTTTCCEEC-------CSCCCCCC
T ss_pred ccCcCCCCCceeEeCCCCeEEeCCCCCEEe-------ccccccCC
Confidence 379999862122244667899999986421 24667654
No 130
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=67.79 E-value=2 Score=29.16 Aligned_cols=30 Identities=23% Similarity=0.545 Sum_probs=24.4
Q ss_pred hhcccccccccchhhcccccccccc--ccCCCC
Q psy5220 28 WIKCLSCKTILYKNDLKFNQQVCTK--CDYHMQ 58 (286)
Q Consensus 28 ~~~c~~c~~~~~~~~l~~~~~vc~~--~~~~~~ 58 (286)
+.+||+|+.++-+.+ .=|...|.+ |++++=
T Consensus 6 ~k~CP~C~~~Iek~~-GCnhmtC~~~~C~~~FC 37 (60)
T 1wd2_A 6 TKECPKCHVTIEKDG-GCNHMVCRNQNCKAEFC 37 (60)
T ss_dssp CCCCTTTCCCCSSCC-SCCSSSCCSSGGGSCCS
T ss_pred ceECcCCCCeeEeCC-CCCcEEECCCCcCCEEe
Confidence 568999999998865 558899988 988863
No 131
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=66.84 E-value=1.4 Score=32.06 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=20.6
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
.--+||.|+...-. +.......|+.|++.
T Consensus 26 ~~y~Cp~CG~~~v~-r~atGiW~C~~Cg~~ 54 (83)
T 1vq8_Z 26 EDHACPNCGEDRVD-RQGTGIWQCSYCDYK 54 (83)
T ss_dssp SCEECSSSCCEEEE-EEETTEEEETTTCCE
T ss_pred ccCcCCCCCCccee-ccCCCeEECCCCCCE
Confidence 44589999984333 334567899999885
No 132
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=66.29 E-value=1.5 Score=29.23 Aligned_cols=29 Identities=17% Similarity=0.519 Sum_probs=20.9
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
+...||+|+..+.-.. ..+...|++|++.
T Consensus 17 ~~~fCPkCG~~~~ma~-~~dr~~C~kCgyt 45 (55)
T 2k4x_A 17 KHRFCPRCGPGVFLAE-HADRYSCGRCGYT 45 (55)
T ss_dssp SSCCCTTTTTTCCCEE-CSSEEECTTTCCC
T ss_pred ccccCcCCCCceeEec-cCCEEECCCCCCE
Confidence 4568999998665322 2357899999886
No 133
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=63.82 E-value=1.8 Score=28.78 Aligned_cols=30 Identities=23% Similarity=0.445 Sum_probs=19.5
Q ss_pred hhccccccc--ccc-------hhhccccccccccccCCC
Q psy5220 28 WIKCLSCKT--ILY-------KNDLKFNQQVCTKCDYHM 57 (286)
Q Consensus 28 ~~~c~~c~~--~~~-------~~~l~~~~~vc~~~~~~~ 57 (286)
..+||+|+. ..| .++-....++|++|+|..
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w 53 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTW 53 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEE
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEe
Confidence 578999996 221 112223568999999864
No 134
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=60.08 E-value=3.4 Score=28.99 Aligned_cols=30 Identities=20% Similarity=0.441 Sum_probs=21.1
Q ss_pred hhhhcccccccccchhhccccccccccccCCC
Q psy5220 26 GLWIKCLSCKTILYKNDLKFNQQVCTKCDYHM 57 (286)
Q Consensus 26 ~~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~ 57 (286)
...-+|+.|+..+-.++ ...-.||+|+++.
T Consensus 26 ~v~Y~C~~CG~~~e~~~--~d~irCp~CG~RI 55 (70)
T 1twf_L 26 TLKYICAECSSKLSLSR--TDAVRCKDCGHRI 55 (70)
T ss_dssp CCCEECSSSCCEECCCT--TSTTCCSSSCCCC
T ss_pred eEEEECCCCCCcceeCC--CCCccCCCCCceE
Confidence 35668999998754432 2345799999973
No 135
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=58.70 E-value=2.5 Score=35.30 Aligned_cols=27 Identities=19% Similarity=0.634 Sum_probs=18.9
Q ss_pred hhhcccccccccchhhccccccccccccCCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYHM 57 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~ 57 (286)
.| +|+.||.+...+++ -.+||.|++..
T Consensus 155 ~~-~C~~CG~~~~g~~~---p~~CP~C~~~k 181 (191)
T 1lko_A 155 KW-RCRNCGYVHEGTGA---PELCPACAHPK 181 (191)
T ss_dssp EE-EETTTCCEEEEEEC---CSBCTTTCCBG
T ss_pred eE-EECCCCCEeeCCCC---CCCCCCCcCCH
Confidence 67 69999976443332 24999999973
No 136
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=57.76 E-value=2.8 Score=30.31 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=21.2
Q ss_pred hhhcccccccccchhhccccccccccccCCCCCCHHHHHHhhcC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLNNFLD 70 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~~L~D 70 (286)
.--|||.|++..|.+.|.. -.+....++|=|
T Consensus 50 F~FkCP~CgEEFyG~~Lp~-------------~EaeKVFELLNd 80 (95)
T 2k5c_A 50 FVFKCPVCGEEFYGKTLPR-------------REAEKVFELLND 80 (95)
T ss_dssp SEEECTTTCCEEETTSSCT-------------TTHHHHHHHHHS
T ss_pred HhhcCCCccHHHhcccCCh-------------HHHHHHHHHHHH
Confidence 3459999999999875533 245666666655
No 137
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=56.90 E-value=11 Score=35.09 Aligned_cols=43 Identities=23% Similarity=0.229 Sum_probs=30.4
Q ss_pred CCcEEEEEEEEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCC
Q psy5220 109 TDALIVIKGSIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGG 168 (286)
Q Consensus 109 ~~~vvtG~g~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgG 168 (286)
.|=||||.|++|.+... | .--....++|.++++|+|.++.+=+
T Consensus 288 ADLVITGEG~~D~Qtl~----------G-------K~p~gVa~~A~~~~vPviaiaG~~~ 330 (383)
T 3cwc_A 288 ADLVITGEGRIDSQTIH----------G-------KVPIGVANIAKRYNKPVIGIAGSLT 330 (383)
T ss_dssp CSEEEECCEESCC--------------C-------HHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred CCEEEECCCCCcCcCCC----------C-------cHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 78899999999987643 2 2234556678899999999987643
No 138
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=56.23 E-value=3 Score=33.33 Aligned_cols=24 Identities=25% Similarity=0.559 Sum_probs=20.0
Q ss_pred hhcccccccccchhhccccccccccccCC
Q psy5220 28 WIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 28 ~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
-++|++|++..|-+ ..+||+|+..
T Consensus 47 ~~rC~~CG~~~~PP-----r~~Cp~C~s~ 70 (145)
T 3irb_A 47 GSKCSKCGRIFVPA-----RSYCEHCFVK 70 (145)
T ss_dssp EEECTTTCCEEESC-----CSEETTTTEE
T ss_pred EEEeCCCCcEEcCc-----hhhCcCCCCC
Confidence 47999999988875 3689999876
No 139
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=55.99 E-value=4.7 Score=30.77 Aligned_cols=38 Identities=16% Similarity=0.555 Sum_probs=23.9
Q ss_pred cCCCCchhhhcccccccc--cch-------hhccccccccccccCCCC
Q psy5220 20 KKSIPKGLWIKCLSCKTI--LYK-------NDLKFNQQVCTKCDYHMQ 58 (286)
Q Consensus 20 ~~~~~~~~~~~c~~c~~~--~~~-------~~l~~~~~vc~~~~~~~~ 58 (286)
.+++|..- .+||+|+.. .|. ++-....++|.+|+|+.+
T Consensus 65 ~~tlp~~~-~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w~ 111 (113)
T 3h0g_I 65 DPTLPRSD-KECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFE 111 (113)
T ss_dssp CSSSCBCC-SCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCCC
T ss_pred cccCCCcc-cCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEEe
Confidence 34556544 789999862 222 122335689999999854
No 140
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=55.94 E-value=3 Score=34.46 Aligned_cols=27 Identities=26% Similarity=0.585 Sum_probs=21.5
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
+..+|++|+.+++..+ +...||+|+..
T Consensus 139 v~a~~~~~g~~m~~~~---~~~~cp~~g~~ 165 (179)
T 3m7n_A 139 LRALCSNCKTEMVREG---DILKCPECGRV 165 (179)
T ss_dssp EECBCTTTCCBCEECS---SSEECSSSCCE
T ss_pred EEecccccCCceEECC---CEEECCCCCCE
Confidence 4678999999888754 67899999764
No 141
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=55.26 E-value=2.4 Score=27.69 Aligned_cols=31 Identities=23% Similarity=0.569 Sum_probs=19.4
Q ss_pred hccccccc--ccch-------hhccccccccccccCCCCC
Q psy5220 29 IKCLSCKT--ILYK-------NDLKFNQQVCTKCDYHMQI 59 (286)
Q Consensus 29 ~~c~~c~~--~~~~-------~~l~~~~~vc~~~~~~~~~ 59 (286)
.+||+|+. ..|. +|-....++|.+|+|+.++
T Consensus 10 ~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~w~~ 49 (50)
T 1tfi_A 10 FTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKF 49 (50)
T ss_dssp SCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEEEC
T ss_pred cCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCeEEe
Confidence 47999985 2221 1222356899999997543
No 142
>3w0f_A Endonuclease 8-like 3; helix two turns helix, zinc finger, DNA binding, hydrolase; 2.00A {Mus musculus}
Probab=53.81 E-value=3.5 Score=36.87 Aligned_cols=28 Identities=18% Similarity=0.456 Sum_probs=22.5
Q ss_pred cccccccccchhhcc---ccccccccccCCC
Q psy5220 30 KCLSCKTILYKNDLK---FNQQVCTKCDYHM 57 (286)
Q Consensus 30 ~c~~c~~~~~~~~l~---~~~~vc~~~~~~~ 57 (286)
.||.|+..+-+..+. +.-+.||.|..|.
T Consensus 253 pC~~CGt~I~~~~~g~~gRsTyfCp~~~~~~ 283 (287)
T 3w0f_A 253 NCDQCHSKITVCRFGENSRMTYFCPHCQKHH 283 (287)
T ss_dssp BCTTTCCBCEEECSSTTCCCEEECTTTSCC-
T ss_pred CCCCCCCEEEEEEecCCCCCEEECCCccccc
Confidence 799999988876664 6789999997763
No 143
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=53.63 E-value=4.7 Score=26.82 Aligned_cols=10 Identities=30% Similarity=0.760 Sum_probs=7.5
Q ss_pred ccccccccCC
Q psy5220 47 QQVCTKCDYH 56 (286)
Q Consensus 47 ~~vc~~~~~~ 56 (286)
.++||.|+..
T Consensus 36 dw~CP~Cga~ 45 (55)
T 2v3b_B 36 DWVCPDCGVG 45 (55)
T ss_dssp TCCCTTTCCC
T ss_pred CCcCCCCCCC
Confidence 5688888875
No 144
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=53.41 E-value=4.2 Score=32.80 Aligned_cols=25 Identities=20% Similarity=0.490 Sum_probs=17.8
Q ss_pred hcccccccccchhhccccccccccccCC
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
-+|..|++..-.. .....||.||..
T Consensus 133 y~C~~Cg~~~~~~---~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 133 YVCIGCGRKFSTL---PPGGVCPDCGSK 157 (165)
T ss_dssp EEESSSCCEESSC---CGGGBCTTTCCB
T ss_pred EECCCCCCcccCC---CCCCcCCCCCCc
Confidence 5799999655432 224689999986
No 145
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=53.05 E-value=5.4 Score=27.11 Aligned_cols=23 Identities=26% Similarity=0.651 Sum_probs=16.4
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
...+|++|+.... ..+||.||..
T Consensus 5 ~mr~C~~CgvYTL-------k~~CP~CG~~ 27 (60)
T 2apo_B 5 RMKKCPKCGLYTL-------KEICPKCGEK 27 (60)
T ss_dssp CCEECTTTCCEES-------SSBCSSSCSB
T ss_pred hceeCCCCCCEec-------cccCcCCCCc
Confidence 3568999974333 4679999876
No 146
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=52.52 E-value=2 Score=29.98 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=22.5
Q ss_pred hcccccccccchhhccccccccccccCCCCCCHHHHH
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRL 65 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri 65 (286)
..||.|+..+.... ..+.-+|+.|+.. |.+++=|
T Consensus 9 L~CP~ck~~L~~~~-~~~~LiC~~cg~~--YPI~dGI 42 (68)
T 2hf1_A 9 LVCPLCKGPLVFDK-SKDELICKGDRLA--FPIKDGI 42 (68)
T ss_dssp CBCTTTCCBCEEET-TTTEEEETTTTEE--EEEETTE
T ss_pred eECCCCCCcCeEeC-CCCEEEcCCCCcE--ecCCCCe
Confidence 37999998766543 3456789999876 3444444
No 147
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=52.14 E-value=2.1 Score=29.89 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=23.2
Q ss_pred hcccccccccchhhccccccccccccCCCCCCHHHHHH
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLN 66 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~ 66 (286)
..||.|+..+.... ..+.-+|+.|+.. |.+++=|-
T Consensus 9 L~CP~ck~~L~~~~-~~~~LiC~~cg~~--YPI~dGIP 43 (68)
T 2jr6_A 9 LVCPVTKGRLEYHQ-DKQELWSRQAKLA--YPIKDGIP 43 (68)
T ss_dssp CBCSSSCCBCEEET-TTTEEEETTTTEE--EEEETTEE
T ss_pred eECCCCCCcCeEeC-CCCEEEcCCCCcE--ecCCCCee
Confidence 37999998776543 3456789999876 44444443
No 148
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=51.94 E-value=2.1 Score=30.10 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=24.9
Q ss_pred hcccccccccchhhccccccccccccCCCCCCHHHHHHhhc
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLNNFL 69 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~~L~ 69 (286)
..||.|+..+.... ..+.-+|+.|+.. |.+++=|-.|+
T Consensus 9 L~CP~ck~~L~~~~-~~~~LiC~~cg~~--YPI~dGIPvmL 46 (70)
T 2js4_A 9 LVCPVCKGRLEFQR-AQAELVCNADRLA--FPVRDGVPIML 46 (70)
T ss_dssp CBCTTTCCBEEEET-TTTEEEETTTTEE--EEEETTEECCC
T ss_pred eECCCCCCcCEEeC-CCCEEEcCCCCce--ecCCCCeeeeC
Confidence 37999998776543 3456789999876 44455554333
No 149
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=51.46 E-value=2.1 Score=29.97 Aligned_cols=35 Identities=17% Similarity=0.280 Sum_probs=23.1
Q ss_pred hcccccccccchhhccccccccccccCCCCCCHHHHHH
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLN 66 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~ 66 (286)
..||.|+..+.... ..+.-+|+.|+.. |.+++=|-
T Consensus 9 L~CP~ck~~L~~~~-~~~~LiC~~cg~~--YPI~dGIP 43 (69)
T 2pk7_A 9 LACPICKGPLKLSA-DKTELISKGAGLA--YPIRDGIP 43 (69)
T ss_dssp CCCTTTCCCCEECT-TSSEEEETTTTEE--EEEETTEE
T ss_pred eeCCCCCCcCeEeC-CCCEEEcCCCCcE--ecCcCCee
Confidence 37999998766533 3456789999876 44444443
No 150
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=49.98 E-value=7 Score=25.65 Aligned_cols=10 Identities=20% Similarity=0.581 Sum_probs=7.4
Q ss_pred ccccccccCC
Q psy5220 47 QQVCTKCDYH 56 (286)
Q Consensus 47 ~~vc~~~~~~ 56 (286)
.++||.|+..
T Consensus 36 dw~CP~Cg~~ 45 (52)
T 1e8j_A 36 DWACPVCGAS 45 (52)
T ss_dssp TCCCSSSCCC
T ss_pred CCcCCCCCCc
Confidence 4688888775
No 151
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=49.37 E-value=5.8 Score=27.73 Aligned_cols=28 Identities=18% Similarity=0.583 Sum_probs=18.7
Q ss_pred hhhcccccccccchhhc---------------cccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDL---------------KFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l---------------~~~~~vc~~~~~~ 56 (286)
.| +|+.|+. +|..+. ....++||.|+..
T Consensus 7 ~y-~C~vCGy-iYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 7 KY-ECEACGY-IYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp CE-EETTTCC-EECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred eE-EeCCCCE-EEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCC
Confidence 45 6999994 465321 2235799999986
No 152
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=49.09 E-value=6.4 Score=27.00 Aligned_cols=35 Identities=14% Similarity=0.281 Sum_probs=23.6
Q ss_pred CCchhhhcccccccccchhhccccccccccccCCCCC
Q psy5220 23 IPKGLWIKCLSCKTILYKNDLKFNQQVCTKCDYHMQI 59 (286)
Q Consensus 23 ~~~~~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~ 59 (286)
.|+...-+|..|+..+.-+. ...-.||.|+++.-+
T Consensus 16 ~~~~v~Y~C~~Cg~~~~l~~--~~~iRC~~CG~RILy 50 (63)
T 3h0g_L 16 RPATMIYLCADCGARNTIQA--KEVIRCRECGHRVMY 50 (63)
T ss_dssp ---CCCCBCSSSCCBCCCCS--SSCCCCSSSCCCCCB
T ss_pred CCCCeEEECCCCCCeeecCC--CCceECCCCCcEEEE
Confidence 34457779999998776542 245789999998433
No 153
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=48.64 E-value=6.4 Score=25.50 Aligned_cols=30 Identities=20% Similarity=0.586 Sum_probs=19.5
Q ss_pred Cchhhhccc-cccccc-------chhhccccccccccc
Q psy5220 24 PKGLWIKCL-SCKTIL-------YKNDLKFNQQVCTKC 53 (286)
Q Consensus 24 ~~~~~~~c~-~c~~~~-------~~~~l~~~~~vc~~~ 53 (286)
++..|+.|. .|++.. ..+..+...++||.|
T Consensus 14 ~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C 51 (52)
T 2kgg_A 14 DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINC 51 (52)
T ss_dssp TTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC
T ss_pred CCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCC
Confidence 456899999 799863 222222356788876
No 154
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=48.08 E-value=6.3 Score=28.43 Aligned_cols=29 Identities=24% Similarity=0.646 Sum_probs=19.8
Q ss_pred hhhhcccccccccchhhc---------------cccccccccccCC
Q psy5220 26 GLWIKCLSCKTILYKNDL---------------KFNQQVCTKCDYH 56 (286)
Q Consensus 26 ~~~~~c~~c~~~~~~~~l---------------~~~~~vc~~~~~~ 56 (286)
..| +|+.|+. +|..+. ....++||.|+..
T Consensus 26 ~~y-~C~vCGy-vYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 26 KLF-RCIQCGF-EYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp CEE-EETTTCC-EEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred ceE-EeCCCCE-EEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 356 7999994 466422 1235799999986
No 155
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=47.91 E-value=7 Score=22.52 Aligned_cols=13 Identities=31% Similarity=0.828 Sum_probs=11.3
Q ss_pred hcccccccccchh
Q psy5220 29 IKCLSCKTILYKN 41 (286)
Q Consensus 29 ~~c~~c~~~~~~~ 41 (286)
.+|+.|++.+|.-
T Consensus 4 ~~C~~C~k~Vy~~ 16 (31)
T 1zfo_A 4 PNCARCGKIVYPT 16 (31)
T ss_dssp CBCSSSCSBCCGG
T ss_pred CcCCccCCEEecc
Confidence 4899999999975
No 156
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} PDB: 3irb_A
Probab=47.72 E-value=4.9 Score=32.11 Aligned_cols=24 Identities=25% Similarity=0.559 Sum_probs=19.6
Q ss_pred hhcccccccccchhhccccccccccccCC
Q psy5220 28 WIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 28 ~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
-++|++|+...|-+ ..+||+|+..
T Consensus 47 ~~rC~~CG~~~fPP-----r~~Cp~C~s~ 70 (145)
T 2gnr_A 47 GSKCSKCGRIFVPA-----RSYCEHCFVK 70 (145)
T ss_dssp EEECTTTCCEEESC-----CSEETTTTEE
T ss_pred EEEECCCCcEEeCC-----CCCCCCCCCC
Confidence 47999999988875 3689999875
No 157
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=47.19 E-value=2.7 Score=29.21 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=23.0
Q ss_pred hcccccccccchhhccccccccccccCCCCCCHHHHHH
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYHMQIKARDRLN 66 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~~~~~ar~ri~ 66 (286)
..||.|+..+.... ..+.-+|+.|+.. |.+++=|=
T Consensus 11 L~CP~ck~~L~~~~-~~g~LvC~~c~~~--YPI~dGIP 45 (67)
T 2jny_A 11 LACPKDKGPLRYLE-SEQLLVNERLNLA--YRIDDGIP 45 (67)
T ss_dssp CBCTTTCCBCEEET-TTTEEEETTTTEE--EEEETTEE
T ss_pred hCCCCCCCcCeEeC-CCCEEEcCCCCcc--ccCCCCEe
Confidence 37999998766543 3446789999876 44444443
No 158
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=45.85 E-value=5.3 Score=33.21 Aligned_cols=28 Identities=21% Similarity=0.517 Sum_probs=19.9
Q ss_pred hcccccccc--cchhhccccccccccccCC
Q psy5220 29 IKCLSCKTI--LYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 29 ~~c~~c~~~--~~~~~l~~~~~vc~~~~~~ 56 (286)
.+||.|+.. -...|.++...||..|+.=
T Consensus 22 ~~CPECGs~~t~IV~D~erGE~VCsdCGLV 51 (197)
T 3k1f_M 22 LTCPECKVYPPKIVERFSEGDVVCALCGLV 51 (197)
T ss_dssp CCCTTTCCSSCCEEEEGGGTEEEETTTCBB
T ss_pred eECcCCCCcCCeEEEeCCCCEEEEcCCCCC
Confidence 389999971 1222446778999999874
No 159
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=45.30 E-value=7.8 Score=25.42 Aligned_cols=10 Identities=30% Similarity=0.647 Sum_probs=7.5
Q ss_pred ccccccccCC
Q psy5220 47 QQVCTKCDYH 56 (286)
Q Consensus 47 ~~vc~~~~~~ 56 (286)
.++||.|+..
T Consensus 35 dw~CP~Cg~~ 44 (52)
T 1yk4_A 35 DWVCPLCGAP 44 (52)
T ss_dssp TCBCTTTCCB
T ss_pred CCcCCCCCCC
Confidence 5688888875
No 160
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=44.64 E-value=6.7 Score=32.45 Aligned_cols=32 Identities=19% Similarity=0.414 Sum_probs=21.5
Q ss_pred hhccccccc--ccch-------hhccccccccccccCCCCC
Q psy5220 28 WIKCLSCKT--ILYK-------NDLKFNQQVCTKCDYHMQI 59 (286)
Q Consensus 28 ~~~c~~c~~--~~~~-------~~l~~~~~vc~~~~~~~~~ 59 (286)
..+||+|+. ..|. ++-...+++|.+|+|+.+.
T Consensus 137 ~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~w~f 177 (178)
T 3po3_S 137 RFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRWKF 177 (178)
T ss_dssp SSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCEECC
T ss_pred CcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCeecc
Confidence 468999985 3332 2223468999999998653
No 161
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=43.98 E-value=9 Score=26.00 Aligned_cols=23 Identities=22% Similarity=0.535 Sum_probs=16.2
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
...+|++|+.... ..+||.||..
T Consensus 4 ~mr~C~~Cg~YTL-------k~~CP~CG~~ 26 (60)
T 2aus_D 4 RIRKCPKCGRYTL-------KETCPVCGEK 26 (60)
T ss_dssp CCEECTTTCCEES-------SSBCTTTCSB
T ss_pred cceECCCCCCEEc-------cccCcCCCCc
Confidence 3568999974333 3679999876
No 162
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=43.17 E-value=11 Score=24.06 Aligned_cols=25 Identities=24% Similarity=0.558 Sum_probs=16.4
Q ss_pred cccccccccchh---------hccccccccccccCC
Q psy5220 30 KCLSCKTILYKN---------DLKFNQQVCTKCDYH 56 (286)
Q Consensus 30 ~c~~c~~~~~~~---------~l~~~~~vc~~~~~~ 56 (286)
+|+.|+ .+|.+ +| ...++||.|+..
T Consensus 6 ~C~vCG-yvyd~~~Gd~t~f~~l-P~dw~CP~Cg~~ 39 (46)
T 6rxn_A 6 VCNVCG-YEYDPAEHDNVPFDQL-PDDWCCPVCGVS 39 (46)
T ss_dssp EETTTC-CEECGGGGTTCCGGGS-CTTCBCTTTCCB
T ss_pred ECCCCC-eEEeCCcCCCcchhhC-CCCCcCcCCCCc
Confidence 699999 44442 22 224699999875
No 163
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=42.49 E-value=7.8 Score=35.22 Aligned_cols=38 Identities=18% Similarity=0.553 Sum_probs=26.1
Q ss_pred hhcccccccc---cchhhccccccccccccCCCCCCHHHHHHhhcCCCc
Q psy5220 28 WIKCLSCKTI---LYKNDLKFNQQVCTKCDYHMQIKARDRLNNFLDKNN 73 (286)
Q Consensus 28 ~~~c~~c~~~---~~~~~l~~~~~vc~~~~~~~~~~ar~ri~~L~D~gs 73 (286)
-.+||.|+.. +-. |......||..||.=- . +.++|.|+
T Consensus 21 ~~~Cp~Cg~~~~~iv~-D~~~G~~vC~~CG~Vl--~-----e~~id~~~ 61 (345)
T 3k7a_M 21 VLTCPECKVYPPKIVE-RFSEGDVVCALCGLVL--S-----DKLVDTRS 61 (345)
T ss_dssp CCCCSTTCCSCCCCCC-CSSSCSCCCSSSCCCC--C-----CCCCCTTC
T ss_pred CCcCcCCCCCCCceEE-ECCCCCEecCCCCeEc--c-----cccccCCc
Confidence 3579999873 333 4466789999999742 1 35678765
No 164
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=42.01 E-value=8.7 Score=28.06 Aligned_cols=28 Identities=25% Similarity=0.819 Sum_probs=19.5
Q ss_pred hhhhcccccccccchh----------------hccccccccccccCC
Q psy5220 26 GLWIKCLSCKTILYKN----------------DLKFNQQVCTKCDYH 56 (286)
Q Consensus 26 ~~~~~c~~c~~~~~~~----------------~l~~~~~vc~~~~~~ 56 (286)
..| +|..|+. +|.. +| ...++||.|+..
T Consensus 34 ~~y-~C~vCGy-vYD~~~Gdp~~gI~pGT~fedl-PddW~CPvCga~ 77 (87)
T 1s24_A 34 LKW-ICITCGH-IYDEALGDEAEGFTPGTRFEDI-PDDWCCPDCGAT 77 (87)
T ss_dssp CEE-EETTTTE-EEETTSCCTTTTCCSCCCGGGC-CTTCCCSSSCCC
T ss_pred ceE-ECCCCCe-EecCCcCCcccCcCCCCChhHC-CCCCCCCCCCCC
Confidence 356 6999994 4654 33 235799999985
No 165
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=41.16 E-value=10 Score=25.15 Aligned_cols=10 Identities=30% Similarity=0.674 Sum_probs=6.6
Q ss_pred ccccccccCC
Q psy5220 47 QQVCTKCDYH 56 (286)
Q Consensus 47 ~~vc~~~~~~ 56 (286)
.++||.|+..
T Consensus 36 dw~CP~Cg~~ 45 (54)
T 4rxn_A 36 DWVCPLCGVG 45 (54)
T ss_dssp TCBCTTTCCB
T ss_pred CCcCcCCCCc
Confidence 4577777664
No 166
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M
Probab=39.89 E-value=7.3 Score=35.54 Aligned_cols=27 Identities=22% Similarity=0.538 Sum_probs=19.4
Q ss_pred hccccccc--ccchhhccccccccccccC
Q psy5220 29 IKCLSCKT--ILYKNDLKFNQQVCTKCDY 55 (286)
Q Consensus 29 ~~c~~c~~--~~~~~~l~~~~~vc~~~~~ 55 (286)
.+||.|+. .....|......||..||.
T Consensus 22 ~~Cp~C~~~~~~lv~D~~~G~~vC~~CGl 50 (345)
T 4bbr_M 22 LTCPECKVYPPKIVERFSEGDVVCALCGL 50 (345)
T ss_dssp CCCSSCCCSSCCEEEEGGGTEEEETTTCB
T ss_pred CcCCCCCCCCCceeEECCCCcEEeCCCCC
Confidence 37999995 2222255678999999985
No 167
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=39.17 E-value=7.9 Score=27.80 Aligned_cols=25 Identities=16% Similarity=0.429 Sum_probs=16.7
Q ss_pred cccccccccchhhccccccccccccC
Q psy5220 30 KCLSCKTILYKNDLKFNQQVCTKCDY 55 (286)
Q Consensus 30 ~c~~c~~~~~~~~l~~~~~vc~~~~~ 55 (286)
-||.|+..+.... ....-.||.|++
T Consensus 27 wCP~C~~~~~~~~-~~~~v~C~~C~~ 51 (86)
T 2ct7_A 27 WCAQCSFGFIYER-EQLEATCPQCHQ 51 (86)
T ss_dssp CCSSSCCCEECCC-SCSCEECTTTCC
T ss_pred ECcCCCchheecC-CCCceEeCCCCC
Confidence 3999998665433 234467888876
No 168
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=38.34 E-value=7.9 Score=31.89 Aligned_cols=28 Identities=14% Similarity=0.384 Sum_probs=21.5
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
.+..||.|++.+... ....+.|++|+..
T Consensus 41 ~Y~ACp~CnKKV~~~--~~g~~~CekC~~~ 68 (172)
T 3u50_C 41 YYYRCTCQGKSVLKY--HGDSFFCESCQQF 68 (172)
T ss_dssp EEEECTTSCCCEEEE--TTTEEEETTTTEE
T ss_pred EehhchhhCCEeeeC--CCCeEECCCCCCC
Confidence 468899999988732 3457899999886
No 169
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=37.65 E-value=11 Score=24.53 Aligned_cols=29 Identities=21% Similarity=0.427 Sum_probs=18.3
Q ss_pred hcccccccccchhh-c-----cccccccccccCCC
Q psy5220 29 IKCLSCKTILYKND-L-----KFNQQVCTKCDYHM 57 (286)
Q Consensus 29 ~~c~~c~~~~~~~~-l-----~~~~~vc~~~~~~~ 57 (286)
-+|+.|++...... | ....+.|+.|+..+
T Consensus 15 ~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f 49 (62)
T 1vd4_A 15 FKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEV 49 (62)
T ss_dssp EECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBC
T ss_pred ccCCCCCchhccHHHhHhhcCCCCCEECCCCCCcc
Confidence 47999998544332 1 12357899898764
No 170
>2zkr_2 60S ribosomal protein L37E; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} SCOP: i.1.1.1
Probab=36.02 E-value=13 Score=27.54 Aligned_cols=26 Identities=27% Similarity=0.675 Sum_probs=21.2
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
.-+.|+.|+...|.. +-..|-+|++.
T Consensus 15 tH~lCrRCG~~sfH~----qK~~CgkCGYp 40 (97)
T 2zkr_2 15 THTLCRRCGSKAYHL----QKSTCGKCGYP 40 (97)
T ss_dssp CEECCTTTCSSCEET----TSCCBTTTCTT
T ss_pred CCCcCCCCCCccCcC----ccccCcccCCc
Confidence 567999999988853 35799999985
No 171
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.61 E-value=15 Score=23.98 Aligned_cols=23 Identities=30% Similarity=0.837 Sum_probs=16.2
Q ss_pred hcccccccccchhhccccccccccccCC
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
..||.|+..+ ......|.+|+|.
T Consensus 15 ~iCpkC~a~~-----~~gaw~CrKCG~~ 37 (51)
T 3j21_g 15 YVCLRCGATN-----PWGAKKCRKCGYK 37 (51)
T ss_dssp EECTTTCCEE-----CTTCSSCSSSSSC
T ss_pred ccCCCCCCcC-----CCCceecCCCCCc
Confidence 3688888762 3356778888886
No 172
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.29 E-value=14 Score=23.88 Aligned_cols=22 Identities=14% Similarity=0.523 Sum_probs=16.1
Q ss_pred cccccccccCCCCCCHHHHHHh
Q psy5220 46 NQQVCTKCDYHMQIKARDRLNN 67 (286)
Q Consensus 46 ~~~vc~~~~~~~~~~ar~ri~~ 67 (286)
.-+.||+|+.++++.---|-.+
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hm 32 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHM 32 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhh
Confidence 4689999999988665555443
No 173
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=35.26 E-value=24 Score=29.24 Aligned_cols=36 Identities=17% Similarity=0.369 Sum_probs=24.0
Q ss_pred hhhcccccccccchh--hcc------------ccccccccccCCCCCCHH
Q psy5220 27 LWIKCLSCKTILYKN--DLK------------FNQQVCTKCDYHMQIKAR 62 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~--~l~------------~~~~vc~~~~~~~~~~ar 62 (286)
.|+.|..|+...... .+. ...++||.|........+
T Consensus 20 ~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~~~~ 69 (183)
T 3lqh_A 20 KMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPAEWR 69 (183)
T ss_dssp CEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSCHHH
T ss_pred CeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCHHHH
Confidence 499999999865443 111 126999999887655443
No 174
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=34.82 E-value=16 Score=35.24 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=24.6
Q ss_pred ccCCC---Cchhhhcccccccccchh-------hcc-ccccccccccC
Q psy5220 19 VKKSI---PKGLWIKCLSCKTILYKN-------DLK-FNQQVCTKCDY 55 (286)
Q Consensus 19 ~~~~~---~~~~~~~c~~c~~~~~~~-------~l~-~~~~vc~~~~~ 55 (286)
.|..+ |+..|+.|..|....+.. +.. -..++||.|..
T Consensus 46 kk~~~~~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 46 KKSHHHKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp CCTTTTTTSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred cccccCCCcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 45555 677899999999854422 111 14689999953
No 175
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=34.63 E-value=14 Score=27.91 Aligned_cols=26 Identities=23% Similarity=0.681 Sum_probs=18.6
Q ss_pred hcccccccccchhhccccccccccccCC
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
-+|.+||... .+.+. .-..||.|+..
T Consensus 68 ~~C~~CG~~F-~~~~~-kPsrCP~CkSe 93 (105)
T 2gmg_A 68 AQCRKCGFVF-KAEIN-IPSRCPKCKSE 93 (105)
T ss_dssp CBBTTTCCBC-CCCSS-CCSSCSSSCCC
T ss_pred cChhhCcCee-cccCC-CCCCCcCCCCC
Confidence 4899999875 43333 35899999875
No 176
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=34.57 E-value=6.5 Score=32.23 Aligned_cols=89 Identities=10% Similarity=0.097 Sum_probs=50.1
Q ss_pred cccCCCCCCHHHHHH-hhcCCCc-eEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEE-EEEE--------EEc
Q psy5220 52 KCDYHMQIKARDRLN-NFLDKNN-FHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALI-VIKG--------SIM 120 (286)
Q Consensus 52 ~~~~~~~~~ar~ri~-~L~D~gs-f~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vv-tG~g--------~i~ 120 (286)
-|+|.+ +..++.|. .|-..|- +.-++. .+.++.+||| |..++.++-.....+.+|+ +|.| ++.
T Consensus 27 gsDhaG-~~lK~~i~~~L~~~G~eV~D~G~--~~~~~~dYPd---~a~~va~~V~~g~~d~GIliCGTGiG~sIaANKv~ 100 (166)
T 3s5p_A 27 ASDHGG-RDLRMFLQQRASAHGYEVMDLGT--ESDASVDYPD---FAKIGCEAVTSGRADCCILVCGTGIGISIAANKMK 100 (166)
T ss_dssp EECGGG-HHHHHHHHHHHHHTTCEEEEEEC----------CH---HHHHHHHHHHTTSCSEEEEEESSSHHHHHHHHTST
T ss_pred EECchH-HHHHHHHHHHHHHCCCEEEEcCC--CCCCCCCHHH---HHHHHHHHHHcCCCcEEEEEcCCcHHHHHHhhcCC
Confidence 356654 45555554 3444442 334443 2345678987 9888888887766666765 5544 788
Q ss_pred CeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEE
Q psy5220 121 NLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCI 163 (286)
Q Consensus 121 G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l 163 (286)
|.+++++-+. ...++++ .++--||.|
T Consensus 101 GIRAAlc~d~-----------------~sA~laR~hNnANVL~l 127 (166)
T 3s5p_A 101 GIRCALCSTE-----------------YDAEMARKHNNANALAL 127 (166)
T ss_dssp TCCEEECSSH-----------------HHHHHHHHTTCCCEEEE
T ss_pred CeEEEEeCCH-----------------HHHHHHHHhCCCcEEEE
Confidence 8888876553 3334443 556778888
No 177
>3u6x_S ORF48; helix/beta, receptor binding complex, phage tail baseplate, protein; 2.60A {Lactococcus phage tp901-1}
Probab=34.39 E-value=24 Score=25.61 Aligned_cols=25 Identities=28% Similarity=0.666 Sum_probs=20.7
Q ss_pred hccccccEEEEcCCcEEEeeChhhh
Q psy5220 213 SFAFMGDIVIAEPGALIGFAGPRVI 237 (286)
Q Consensus 213 s~a~~~d~via~~~A~i~~~gp~vi 237 (286)
+++|++++++...+..+-+.||+++
T Consensus 64 ~y~lagev~~~~~~~ll~in~tqvl 88 (105)
T 3u6x_S 64 SYTLAGDIILIDDGTLLVIKETQVL 88 (105)
T ss_dssp GGCCCSEEEEETTTEEEEEETTEEE
T ss_pred heeecceEEEecCCEEEEEcCCEEE
Confidence 5668889988888888888898874
No 178
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=33.75 E-value=58 Score=29.33 Aligned_cols=51 Identities=12% Similarity=0.197 Sum_probs=36.3
Q ss_pred CCCcEEEEEeCCCcchhh------chHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCc
Q psy5220 156 QKIPFVCITATGGARMQE------GLLSLMQMAKTTAILTKLSKKKIPFISVLTNPT 206 (286)
Q Consensus 156 ~~iPlV~l~dsgGa~i~E------g~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~ 206 (286)
.+.|+.++....|...+| |........|+.+.+....+.++|+|+++..+.
T Consensus 115 ~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~~PlI~lvdt~G 171 (327)
T 2f9i_A 115 NGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKG 171 (327)
T ss_dssp TTEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCEEEEEEEEcCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcCCCEEEEEeCCC
Confidence 578999998877765543 333334456777777777778999999998554
No 179
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=32.45 E-value=6.8 Score=26.08 Aligned_cols=26 Identities=27% Similarity=0.709 Sum_probs=18.5
Q ss_pred cccccccccchhhccccccccc--cccCCCC
Q psy5220 30 KCLSCKTILYKNDLKFNQQVCT--KCDYHMQ 58 (286)
Q Consensus 30 ~c~~c~~~~~~~~l~~~~~vc~--~~~~~~~ 58 (286)
.||.|+..+...+ +.-+|+ .|+..++
T Consensus 12 ~CP~c~~~L~~~~---~~L~C~~~~c~~~YP 39 (56)
T 2kpi_A 12 ACPACHAPLEERD---AELICTGQDCGLAYP 39 (56)
T ss_dssp CCSSSCSCEEEET---TEEEECSSSCCCEEE
T ss_pred eCCCCCCcceecC---CEEEcCCcCCCcEEe
Confidence 7999998765543 456898 8877643
No 180
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=32.27 E-value=62 Score=29.31 Aligned_cols=51 Identities=20% Similarity=0.353 Sum_probs=35.8
Q ss_pred CCCcEEEEEeCCCcchhh------chHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCc
Q psy5220 156 QKIPFVCITATGGARMQE------GLLSLMQMAKTTAILTKLSKKKIPFISVLTNPT 206 (286)
Q Consensus 156 ~~iPlV~l~dsgGa~i~E------g~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~ 206 (286)
.+.||.++..-.|...+| |........|+.+.+....+.++|+|+++..+.
T Consensus 129 ~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~lPlI~lvDt~G 185 (339)
T 2f9y_A 129 DGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPG 185 (339)
T ss_dssp TTEEEEEEEECCCSSTTHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCEEEEEEEEeCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcCCCEEEEEeCCC
Confidence 588999998777664433 333334556777777776778999999998554
No 181
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=32.14 E-value=43 Score=26.94 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=26.4
Q ss_pred cccccCCChHH----HHHHHHHHHHHHhCCCcEEEEEeC
Q psy5220 132 EFMGGSMGSVV----GERFIQGAQISLEQKIPFVCITAT 166 (286)
Q Consensus 132 ~~~gGs~~~~~----~~K~~r~~~~A~~~~iPlV~l~ds 166 (286)
.|.+|++.... ...+.++++.|++.++|||+..+.
T Consensus 13 ~f~~g~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~ 51 (182)
T 3eef_A 13 EFIHGRLATPEAMKTVGPARKVIETFRRSGLPVVYVNDS 51 (182)
T ss_dssp HHHTSTTCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cCCCCccCCccHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 35677766443 455788888899999999999864
No 182
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=31.41 E-value=13 Score=32.54 Aligned_cols=25 Identities=20% Similarity=0.505 Sum_probs=14.3
Q ss_pred hcccccccccchhhcccccccccccc
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCD 54 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~ 54 (286)
.-|+.|+..+...+ .....+||.|+
T Consensus 108 ~fC~~CG~~~~~~~-~~~~~~C~~C~ 132 (269)
T 1vk6_A 108 KYCGYCGHEMYPSK-TEWAMLCSHCR 132 (269)
T ss_dssp SBCTTTCCBEEECS-SSSCEEESSSS
T ss_pred CccccCCCcCccCC-CceeeeCCCCC
Confidence 45777776654433 33456677664
No 183
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=30.63 E-value=97 Score=25.00 Aligned_cols=47 Identities=13% Similarity=0.205 Sum_probs=32.0
Q ss_pred cCeeEEEEEEcC--ccc----ccCCC----hHHHHHHHHHHHHHHhCCCcEEEEEeC
Q psy5220 120 MNLPLVVAVFEF--EFM----GGSMG----SVVGERFIQGAQISLEQKIPFVCITAT 166 (286)
Q Consensus 120 ~G~~v~v~a~d~--~~~----gGs~~----~~~~~K~~r~~~~A~~~~iPlV~l~ds 166 (286)
+....++++-|. .|. +|++. .....++.++++.|++.++|||+..+.
T Consensus 4 ~~~~~aLlvID~Q~~f~~~~~~g~l~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~ 60 (190)
T 3lqy_A 4 TENTTALLLIDFQNDYFSTYNGAKNPLVGTEAAAEQGAKLLAKFRQQGLPVVHVRHE 60 (190)
T ss_dssp CSCCEEEEEECCBGGGCTTSTTCSSCCBTHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEEEEcCchhhhCcCCCCccCcCCHHHHHHHHHHHHHHHHHCCCeEEEEEEe
Confidence 334445555543 344 56554 355678889999999999999999773
No 184
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=29.55 E-value=18 Score=24.11 Aligned_cols=33 Identities=21% Similarity=0.558 Sum_probs=21.7
Q ss_pred Cchhhhcccccccccch-------hhcc-ccccccccccCC
Q psy5220 24 PKGLWIKCLSCKTILYK-------NDLK-FNQQVCTKCDYH 56 (286)
Q Consensus 24 ~~~~~~~c~~c~~~~~~-------~~l~-~~~~vc~~~~~~ 56 (286)
+.+.|+.|..|+..... ++.. ...++||.|..+
T Consensus 18 ~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 18 ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 45789999999875322 2222 146899999654
No 185
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=29.36 E-value=16 Score=30.33 Aligned_cols=75 Identities=8% Similarity=0.114 Sum_probs=45.6
Q ss_pred cccCCCCCCHHHHHH-hhcC-CCceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEE-EEEE--------EEc
Q psy5220 52 KCDYHMQIKARDRLN-NFLD-KNNFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALI-VIKG--------SIM 120 (286)
Q Consensus 52 ~~~~~~~~~ar~ri~-~L~D-~gsf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vv-tG~g--------~i~ 120 (286)
-|+|.+ +..++.|. .|-. +--++-++-...+.++.+||| |..++.++-.....+.+|+ +|.| ++.
T Consensus 28 gsDhaG-~~lK~~i~~~L~~~~~G~eV~D~G~~s~~s~DYPd---~a~~vA~~V~~g~~d~GIliCGTGiG~sIaANKv~ 103 (179)
T 3k7p_A 28 GTDHPA-FAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPD---FASRVAEMVARKEVEFGVLAAGSGIGMSIAANKVP 103 (179)
T ss_dssp EECTGG-GGGHHHHHHHHHHTCTTEEEEECSCSSSSCCCHHH---HHHHHHHHHHTTSSSEEEEEESSSHHHHHHHHTST
T ss_pred EECchH-HHHHHHHHHHHHhcCCCCeEEEcCCCCCCCCCHHH---HHHHHHHHHHcCCCCEEEEEccCcHHHhhHhhcCC
Confidence 456654 44555554 4443 122444433333456778887 8888888877766666665 5554 788
Q ss_pred CeeEEEEEEc
Q psy5220 121 NLPLVVAVFE 130 (286)
Q Consensus 121 G~~v~v~a~d 130 (286)
|.+++++-+.
T Consensus 104 GIRAAlc~d~ 113 (179)
T 3k7p_A 104 GVRAALCHDH 113 (179)
T ss_dssp TCCEEECCSH
T ss_pred CeEEEEeCCH
Confidence 9888877654
No 186
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=28.86 E-value=1.1e+02 Score=25.24 Aligned_cols=47 Identities=21% Similarity=0.206 Sum_probs=31.1
Q ss_pred EEEEEEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCc
Q psy5220 114 VIKGSIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGA 169 (286)
Q Consensus 114 tG~g~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa 169 (286)
.-.|+++|++|+++.. | +|...+.-. +.++...+++-.|+.+++.|+
T Consensus 38 ~~~G~~~g~~Vvv~~~------G-~G~~~aa~~--~~~l~~~~~~~~ii~~G~aGg 84 (236)
T 4g41_A 38 YYTGRFGKHELILVQS------G-VGKVMSAMT--VAILVEHFKAQAIINTGSAGA 84 (236)
T ss_dssp EEEEEETTEEEEEEEC------C-SHHHHHHHH--HHHHHHTTCCSEEEEEEEECB
T ss_pred EEEEEECCEEEEEEeC------C-CCHHHHHHH--HHHHHHhCCCCEEEEEeeecC
Confidence 3468999999988753 2 444443322 234446789999999887664
No 187
>3r8s_0 50S ribosomal protein L32; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_Z 1p86_Z 2awb_0 2aw4_0 2i2v_0 2j28_0 2i2t_0* 2qao_0* 2qba_0* 2qbc_0* 2qbe_0 2qbg_0 2qbi_0* 2qbk_0* 2qov_0 2qox_0 2qoz_0* 2qp1_0* 2rdo_0 2vhm_0 ...
Probab=28.72 E-value=14 Score=24.54 Aligned_cols=23 Identities=4% Similarity=-0.013 Sum_probs=16.3
Q ss_pred hhhcccccccccchhhccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
..+.||.|++.. ....+||. |++
T Consensus 26 ~l~~c~~cGe~~------l~H~vc~~-G~Y 48 (56)
T 3r8s_0 26 SLSVDKTSGEKH------LRHHITAD-GYY 48 (56)
T ss_dssp CEEECTTTCCEE------ETTBCCTT-SEE
T ss_pred ceeECCCCCCee------cccEECCC-CeE
Confidence 467999999743 34689987 543
No 188
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=27.91 E-value=19 Score=29.92 Aligned_cols=94 Identities=14% Similarity=0.238 Sum_probs=57.1
Q ss_pred ccccccCCCCCCHHHHH-HhhcCCC---ceEEecCCCCcCCCCCCCCccchHHHHHHHhhcCCCCCcEE-EEEE------
Q psy5220 49 VCTKCDYHMQIKARDRL-NNFLDKN---NFHEIGENILPVDTLNFKDNIKYSERLKLAKKNTNETDALI-VIKG------ 117 (286)
Q Consensus 49 vc~~~~~~~~~~ar~ri-~~L~D~g---sf~E~~~~~~~~d~l~f~~~~~y~~~l~~~~~~~~~~~~vv-tG~g------ 117 (286)
+---|+|.+ +..++.| +.|-+.| .+.-++.. .+.++.+||| |..++.++-.....+.+|+ ||.|
T Consensus 32 IaIgsDHaG-~~LK~~i~~~L~~~G~g~eV~D~G~~-s~~e~~DYPd---~a~~vA~~V~~ge~d~GIliCGTGiG~sIa 106 (184)
T 3sgw_A 32 LAIACDDAG-VSYKEALKAHLSDNPLVSSITDVGVT-STTDKTAYPH---VAIQAAQLIKDGKVDRALMICGTGLGVAIS 106 (184)
T ss_dssp EEEEECGGG-HHHHHHHHHHHTTCTTEEEEEECSCC-STTCCCCHHH---HHHHHHHHHHTTSCSEEEEEESSSHHHHHH
T ss_pred EEEEECchh-HHHHHHHHHHHHhCCCCcEEEEcCCC-CCCCCCCHHH---HHHHHHHHHHcCCCcEEEEEcCCcHHHhhh
Confidence 433467765 5566655 4555666 33333332 1345667877 8888888777766666665 5554
Q ss_pred --EEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHH-hCCCcEEEEE
Q psy5220 118 --SIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISL-EQKIPFVCIT 164 (286)
Q Consensus 118 --~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~-~~~iPlV~l~ 164 (286)
|+.|.+++++-+. ...++++ .++--||.|-
T Consensus 107 ANKv~GIRAAlc~d~-----------------~sA~laR~HNnANVL~lG 139 (184)
T 3sgw_A 107 ANKVPGIRAVTAHDT-----------------FSVERAILSNDAQVLCFG 139 (184)
T ss_dssp HHTSTTCCEEECCSH-----------------HHHHHHHHTTCCSEEEEE
T ss_pred hhcCCCeEEEEeCCH-----------------HHHHHHHHhCCCcEEEEc
Confidence 7889888876654 2233443 4557777774
No 189
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=27.72 E-value=17 Score=32.57 Aligned_cols=32 Identities=19% Similarity=0.455 Sum_probs=20.2
Q ss_pred hhccccccc--ccchh-------hccccccccccccCCCCC
Q psy5220 28 WIKCLSCKT--ILYKN-------DLKFNQQVCTKCDYHMQI 59 (286)
Q Consensus 28 ~~~c~~c~~--~~~~~-------~l~~~~~vc~~~~~~~~~ 59 (286)
..+||+|+. ..|.+ +-...+++|.+|+|+.+.
T Consensus 268 ~~~C~~C~~~~~~~~q~Q~rsaDe~~t~f~~C~~Cg~~w~f 308 (309)
T 1pqv_S 268 RFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 308 (309)
T ss_pred cccCCCCCCCeeEEEEeecccCCCCCcEEEEeCCCCCceec
Confidence 458999995 22221 112346899999998653
No 190
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.07 E-value=15 Score=25.21 Aligned_cols=28 Identities=25% Similarity=0.501 Sum_probs=15.3
Q ss_pred hcccccccccchhhccc-------cccccccccCC
Q psy5220 29 IKCLSCKTILYKNDLKF-------NQQVCTKCDYH 56 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~-------~~~vc~~~~~~ 56 (286)
.+|+.|++.+...+|.. .-+.|+.|+..
T Consensus 18 ~~C~~C~~~~~~~~L~~H~~~c~~~~~~C~~C~~~ 52 (75)
T 2d9k_A 18 AVCQHCDLELSILKLKEHEDYCGARTELCGNCGRN 52 (75)
T ss_dssp EECSSSCCEECHHHHHHHHHHHHHCEEECSSSCCE
T ss_pred cCCcccChHhhHHHHHHHHhHcCCCceEcccCCCc
Confidence 45666766665555542 13456666554
No 191
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=26.50 E-value=18 Score=24.92 Aligned_cols=26 Identities=19% Similarity=0.618 Sum_probs=14.9
Q ss_pred hhccccccc--ccchhhccccccccccccC
Q psy5220 28 WIKCLSCKT--ILYKNDLKFNQQVCTKCDY 55 (286)
Q Consensus 28 ~~~c~~c~~--~~~~~~l~~~~~vc~~~~~ 55 (286)
-+|||.|++ .+|.. ....-.|..|+.
T Consensus 7 ~VKCp~C~niq~VFSh--A~tvV~C~~Cg~ 34 (66)
T 1qxf_A 7 KVKCPDCEHEQVIFDH--PSTIVKCIICGR 34 (66)
T ss_dssp EEECTTTCCEEEEESS--CSSCEECSSSCC
T ss_pred EEECCCCCCceEEEec--CceEEEcccCCC
Confidence 467888876 44443 234455666654
No 192
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=26.28 E-value=39 Score=28.53 Aligned_cols=21 Identities=19% Similarity=0.246 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCCcEEEEEeCC
Q psy5220 147 IQGAQISLEQKIPFVCITATG 167 (286)
Q Consensus 147 ~r~~~~A~~~~iPlV~l~dsg 167 (286)
..++..|...+||+|.|+||-
T Consensus 128 ~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 128 KQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp HHHHHHHHHTTCCEEEEECTT
T ss_pred hhHHHHHHHhCCCEEEEeCCC
Confidence 467889999999999999974
No 193
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=26.21 E-value=28 Score=24.28 Aligned_cols=31 Identities=10% Similarity=0.286 Sum_probs=17.9
Q ss_pred hhhhcccccccccchhhc---cccccccccccCC
Q psy5220 26 GLWIKCLSCKTILYKNDL---KFNQQVCTKCDYH 56 (286)
Q Consensus 26 ~~~~~c~~c~~~~~~~~l---~~~~~vc~~~~~~ 56 (286)
.+-+||.+----++.++| .=++.+||.|..+
T Consensus 6 ~~C~kCEq~~vn~~DqelHdlnCs~NiCPYC~nR 39 (77)
T 2l7x_A 6 QTCTICETTPVNAIDAEMHDLNCSYNICPYCASR 39 (77)
T ss_dssp CCCTTTCCCCSSHHHHHHHHHHHTTTCCTTTCCC
T ss_pred ceeeeeccccccHHHHHHHHcCCCcccChhhhcc
Confidence 344555542223444443 4478999999876
No 194
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=25.57 E-value=18 Score=25.72 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=22.1
Q ss_pred hhhhcccccccccchhhccccccccccccCCC
Q psy5220 26 GLWIKCLSCKTILYKNDLKFNQQVCTKCDYHM 57 (286)
Q Consensus 26 ~~~~~c~~c~~~~~~~~l~~~~~vc~~~~~~~ 57 (286)
-.|+.|..|++....+. ......||.|+.+.
T Consensus 35 ~v~I~CnDC~~~s~v~~-h~lg~kC~~C~SyN 65 (79)
T 2k2d_A 35 TVDILCNDCNGRSTVQF-HILGMKCKICESYN 65 (79)
T ss_dssp EEEEEESSSCCEEEEEC-CTTCCCCTTTSCCC
T ss_pred EeEEECCCCCCCccCCc-eeecccCcCCCCcC
Confidence 36899999998765542 33344899998774
No 195
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=25.18 E-value=17 Score=27.22 Aligned_cols=41 Identities=15% Similarity=0.206 Sum_probs=24.6
Q ss_pred Cchhhhccc-ccccccchh--hcc-----------ccccccccccCCCCCCHHHH
Q psy5220 24 PKGLWIKCL-SCKTILYKN--DLK-----------FNQQVCTKCDYHMQIKARDR 64 (286)
Q Consensus 24 ~~~~~~~c~-~c~~~~~~~--~l~-----------~~~~vc~~~~~~~~~~ar~r 64 (286)
+++.|+.|. .|.+..... .|. ...++||.|......+....
T Consensus 15 ~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~~~~~~ 69 (105)
T 2xb1_A 15 DDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEGSGSGS 69 (105)
T ss_dssp TTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTTC----
T ss_pred CCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCCCCCCC
Confidence 456799998 898754432 111 14689999987766555444
No 196
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=25.09 E-value=16 Score=34.15 Aligned_cols=30 Identities=17% Similarity=0.449 Sum_probs=20.4
Q ss_pred hhhcccccccccchh----------hccccccccccccCC
Q psy5220 27 LWIKCLSCKTILYKN----------DLKFNQQVCTKCDYH 56 (286)
Q Consensus 27 ~~~~c~~c~~~~~~~----------~l~~~~~vc~~~~~~ 56 (286)
.-..||.|++..... ++---...|++|||+
T Consensus 219 ~~s~Cp~C~~~~~t~~~~~~IP~F~eViims~~C~~CGyr 258 (404)
T 2qkd_A 219 FNTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHR 258 (404)
T ss_dssp EEECCTTTCCTTCEEEEEECCTTSCCEEEEEEECSSSCCE
T ss_pred ecccCccCCCccEEEEEEEeCCCCCcEEEEEEECCCCCCc
Confidence 457899999854332 222235789999998
No 197
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=25.07 E-value=1.2e+02 Score=25.96 Aligned_cols=48 Identities=6% Similarity=0.146 Sum_probs=29.4
Q ss_pred HHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCc
Q psy5220 149 GAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPT 206 (286)
Q Consensus 149 ~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~ 206 (286)
..++|...+.|+|++++.....+. .+...+..+.+.++++..+|.+..
T Consensus 149 ~adla~~l~~pVILV~~~~~g~i~----------~~~lt~~~l~~~g~~i~GvIlN~v 196 (251)
T 3fgn_A 149 LRDVAVDVAAAALVVVTADLGTLN----------HTKLTLEALAAQQVSCAGLVIGSW 196 (251)
T ss_dssp HHHHHHHTTCEEEEEECSSTTHHH----------HHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHHHcCCCEEEEEcCCCccHH----------HHHHHHHHHHhCCCCEEEEEEECC
Confidence 345677888999888887542221 112223334456788888888764
No 198
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=25.06 E-value=28 Score=27.89 Aligned_cols=36 Identities=17% Similarity=0.350 Sum_probs=23.2
Q ss_pred hhcccccccc--cchhhccccccccccccCCCCCCHHH
Q psy5220 28 WIKCLSCKTI--LYKNDLKFNQQVCTKCDYHMQIKARD 63 (286)
Q Consensus 28 ~~~c~~c~~~--~~~~~l~~~~~vc~~~~~~~~~~ar~ 63 (286)
++.|+.|+.+ ...++=....-.|..||.+..++++.
T Consensus 104 yVlC~~C~sPdT~L~k~~r~~~l~C~ACGa~~~V~~~k 141 (148)
T 2d74_B 104 YVICPVCGSPDTKIIKRDRFHFLKCEACGAETPIQHLL 141 (148)
T ss_dssp HSSCSSSCCTTCCCCBSSSSBCCCCSSSCCCCCCCC--
T ss_pred EEECCCCCCcCcEEEEeCCEEEEEecCCCCCccccchh
Confidence 5889999962 22222133577899999988777653
No 199
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=24.95 E-value=1.5e+02 Score=24.89 Aligned_cols=59 Identities=17% Similarity=0.120 Sum_probs=37.5
Q ss_pred CcEEEEEEEEcCeeEEEEEEcC--cccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCcc
Q psy5220 110 DALIVIKGSIMNLPLVVAVFEF--EFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGAR 170 (286)
Q Consensus 110 ~~vvtG~g~i~G~~v~v~a~d~--~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa~ 170 (286)
++...-.|+++|++|+++..-. .+-..++|...+.-.+. ++...+++-.|+.+++.|+-
T Consensus 47 ~~~~~~~G~~~g~~V~v~~~G~~h~~~~~~iG~~~aa~~~~--~ll~~~~~~~iI~~G~aGgl 107 (254)
T 3bsf_A 47 VTWIMFKGMYKDLNINIVCPGKDSTLGVESVGTVPASLVTY--ASILAIQPDLIINAGTAGGF 107 (254)
T ss_dssp SCCEEEEEEETTEEEEEEECCBCTTTCSBCCSHHHHHHHHH--HHHHSSCCSEEEEEEEEEEC
T ss_pred CCeEEEEEEECCEEEEEEECCCccccccCccCHHHHHHHHH--HHHHHcCCCEEEEEEeecCc
Confidence 4445667899999999885310 01112377766654432 44456899999999876653
No 200
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=24.44 E-value=43 Score=23.33 Aligned_cols=34 Identities=15% Similarity=0.418 Sum_probs=22.7
Q ss_pred Cchhhhcccccccccc-------hhhcc-ccccccccccCCC
Q psy5220 24 PKGLWIKCLSCKTILY-------KNDLK-FNQQVCTKCDYHM 57 (286)
Q Consensus 24 ~~~~~~~c~~c~~~~~-------~~~l~-~~~~vc~~~~~~~ 57 (286)
+.+.|+.|..|++... ..+.. ...++||.|....
T Consensus 23 ~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 23 VNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp SSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 4578999999987533 22221 2468999997653
No 201
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=24.30 E-value=93 Score=24.75 Aligned_cols=27 Identities=7% Similarity=-0.127 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEeC
Q psy5220 140 SVVGERFIQGAQISLEQKIPFVCITAT 166 (286)
Q Consensus 140 ~~~~~K~~r~~~~A~~~~iPlV~l~ds 166 (286)
......+.++++.|++.++|||+..+.
T Consensus 27 ~~~v~~i~~l~~~ar~~g~pVi~t~~~ 53 (180)
T 1im5_A 27 DKIIPKVNEYIRKFKEKGALIVATRDW 53 (180)
T ss_dssp GGGHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 456788899999999999999999886
No 202
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=23.90 E-value=1.2e+02 Score=24.66 Aligned_cols=47 Identities=9% Similarity=0.061 Sum_probs=31.5
Q ss_pred EcCeeEEEEEEcCc--cc--ccCCC----hHHHHHHHHHHHHHHhCCCcEEEEEe
Q psy5220 119 IMNLPLVVAVFEFE--FM--GGSMG----SVVGERFIQGAQISLEQKIPFVCITA 165 (286)
Q Consensus 119 i~G~~v~v~a~d~~--~~--gGs~~----~~~~~K~~r~~~~A~~~~iPlV~l~d 165 (286)
++....++++-|.. |. +|++. ......+.++++.|++.++|||+...
T Consensus 4 ~~~~~tALlvID~Q~~f~~~~g~l~~~~~~~iv~~i~~L~~~ar~~g~pVi~~~~ 58 (204)
T 3hu5_A 4 TRNRTVALAIIDMQNDFVLPGAPACVEGAMGTVPVIAGLLAKARAEGWMVLHVVR 58 (204)
T ss_dssp --CCCEEEEEECCBHHHHSTTSTTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCCeEEEEECCchhhhCCCCcccccCHHHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 44556666666553 33 56554 45566788899999999999999643
No 203
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=23.26 E-value=17 Score=24.76 Aligned_cols=16 Identities=25% Similarity=0.304 Sum_probs=10.5
Q ss_pred CCchhhhccc-cccccc
Q psy5220 23 IPKGLWIKCL-SCKTIL 38 (286)
Q Consensus 23 ~~~~~~~~c~-~c~~~~ 38 (286)
-++..|+.|. .|.+..
T Consensus 19 ~~~~~mI~CD~~C~~Wf 35 (65)
T 2vpb_A 19 NDDQDAILCEASCQKWF 35 (65)
T ss_dssp CTTSCEEEBTTTTCCEE
T ss_pred CCCCCeEecccCccccC
Confidence 3556777887 777643
No 204
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=23.26 E-value=61 Score=27.19 Aligned_cols=49 Identities=10% Similarity=0.167 Sum_probs=36.2
Q ss_pred EEcCeeEEEEEEcCcc----cccCCCh---------HHHHHHHHHHHHHHhCCCcEEEEEeC
Q psy5220 118 SIMNLPLVVAVFEFEF----MGGSMGS---------VVGERFIQGAQISLEQKIPFVCITAT 166 (286)
Q Consensus 118 ~i~G~~v~v~a~d~~~----~gGs~~~---------~~~~K~~r~~~~A~~~~iPlV~l~ds 166 (286)
+++-...++++-|... .+|.+.. .....+.++++.|++.++|||+..+.
T Consensus 20 ~l~~~~tALlVID~Qndf~~~~g~l~~~~~~~~~~~~vv~~i~~Ll~~ar~~g~pVi~~~~~ 81 (226)
T 3kl2_A 20 ELDPARTAIVLIEYQNEFTSDGGVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPIT 81 (226)
T ss_dssp CCCGGGEEEEEECCBHHHHSTTCTTHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred cCCCCCeEEEEEcCchhhhCCCccccccccccccHHHHHHHHHHHHHHHHHcCCeEEEEEee
Confidence 4777777777777652 3577642 34667889999999999999998764
No 205
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=23.22 E-value=48 Score=28.91 Aligned_cols=21 Identities=14% Similarity=0.113 Sum_probs=18.6
Q ss_pred HHHHHHHHhCCCcEEEEEeCC
Q psy5220 147 IQGAQISLEQKIPFVCITATG 167 (286)
Q Consensus 147 ~r~~~~A~~~~iPlV~l~dsg 167 (286)
..++..|...+||+|.|+||-
T Consensus 164 ~~AI~EA~~lgIPvIalvDTn 184 (253)
T 3bch_A 164 HQPLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp HHHHHHHHHTTCCEEEEECTT
T ss_pred chHHHHHHHhCCCEEEEEcCC
Confidence 467889999999999999975
No 206
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=23.21 E-value=91 Score=26.15 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=36.2
Q ss_pred EEcCeeEEEEEEcCc--ccc--cCC---ChHHHHHHHHHHHHHHhCCCcEEEEEeCCCc
Q psy5220 118 SIMNLPLVVAVFEFE--FMG--GSM---GSVVGERFIQGAQISLEQKIPFVCITATGGA 169 (286)
Q Consensus 118 ~i~G~~v~v~a~d~~--~~g--Gs~---~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa 169 (286)
+|+-.+.++++-|.. |.. +.. .......+.++++.|++.++|||+..+....
T Consensus 23 ~ldp~rtALlVIDmQ~~F~~~~~~~~~~~~~vv~~i~~Li~~ar~~g~pVi~t~~~~~~ 81 (223)
T 3tg2_A 23 RIDASRAVLLIHNMQEYFVHYFDSQAEPIPSLIKHIQQLKAHAKQAGIPVVYTAQPANQ 81 (223)
T ss_dssp CCCTTTEEEEEECCBHHHHTTBCTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCSSC
T ss_pred cCCCCCeEEEEEcCchhhhCccccccccHHHHHHHHHHHHHHHHHcCCeEEEEEEeCCC
Confidence 466666777776654 321 111 2456788899999999999999999886543
No 207
>1ryq_A DNA-directed RNA polymerase, subunit E''; structural genomics, zinc, PSI, protein structure initiative; 1.38A {Pyrococcus furiosus} SCOP: g.41.9.3 PDB: 3qqc_E
Probab=23.06 E-value=28 Score=24.20 Aligned_cols=20 Identities=25% Similarity=0.677 Sum_probs=15.4
Q ss_pred hcccccccccchhhccccccccccccC
Q psy5220 29 IKCLSCKTILYKNDLKFNQQVCTKCDY 55 (286)
Q Consensus 29 ~~c~~c~~~~~~~~l~~~~~vc~~~~~ 55 (286)
.-|.+|...+ ....||+|+.
T Consensus 12 ~AC~~C~~~~-------~~~~CPnC~s 31 (69)
T 1ryq_A 12 KACRHCHYIT-------SEDRCPVCGS 31 (69)
T ss_dssp EEETTTCBEE-------SSSSCTTTCC
T ss_pred hhHHhCCccc-------cCCcCCCccC
Confidence 4699999855 3578999994
No 208
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=23.02 E-value=1.5e+02 Score=24.18 Aligned_cols=49 Identities=8% Similarity=0.152 Sum_probs=34.0
Q ss_pred EcCeeEEEEEEcC--cccccCCC----hHHHHHHHHHHHHHHhCCCcEEEEEeCC
Q psy5220 119 IMNLPLVVAVFEF--EFMGGSMG----SVVGERFIQGAQISLEQKIPFVCITATG 167 (286)
Q Consensus 119 i~G~~v~v~a~d~--~~~gGs~~----~~~~~K~~r~~~~A~~~~iPlV~l~dsg 167 (286)
++....++++-|. .|..|++. ......+.++++.|++.++|||+..+..
T Consensus 19 ~~~~~tALlvID~Q~~f~~g~l~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~ 73 (197)
T 4h17_A 19 AKLSHASLIIIDAQKEYLSGPLKLSGMDEAVANIARLLDAARKSGRPIIHVRHLG 73 (197)
T ss_dssp CCGGGEEEEEECCBGGGGSSTTCCTTHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCCCeEEEEEcccchhhCCccCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEEec
Confidence 4444556666554 34556654 3456778888999999999999998764
No 209
>3ddo_A Urdpase, upase, uridine phosphorylase; transferase, cytoplasm, glycosyltransferase; 1.50A {Salmonella typhimurium} SCOP: c.56.2.1 PDB: 1ryz_A 1sj9_A* 1y1q_A* 1y1s_A 1y1r_A 1zl2_A* 2hn9_A 1y1t_A* 2hsw_A 2hwu_A* 2pga_A* 2hrd_A 3dps_A 3fwp_A* 3nsr_A* 3c74_A* 2qdk_A 2iq5_A 2oec_A* 2i8a_A ...
Probab=22.94 E-value=2e+02 Score=24.34 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=33.7
Q ss_pred cEEEEEEEEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCc
Q psy5220 111 ALIVIKGSIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGGA 169 (286)
Q Consensus 111 ~vvtG~g~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgGa 169 (286)
...+-.|+++|++|+++.. | +|...+.-.++.+ ..+++..|+.+++.|+
T Consensus 49 ~~~~~~G~~~g~~V~~~~~------G-~G~~~aa~~~~~l---~~~g~~~ii~~G~aGg 97 (253)
T 3ddo_A 49 EFTSWRAELDGKAVIVCST------G-IGGPSTSIAVEEL---AQLGIRTFLRIGTTGA 97 (253)
T ss_dssp TEEEEEEEETTEEEEEECC------C-SSHHHHHHHHHHH---HHTTCCEEEEEEEECC
T ss_pred CeEEEEEEECCEEEEEEeC------C-CChHHHHHHHHHH---HHcCCCEEEEEEeecc
Confidence 3445678999999998742 2 5666655444433 5689999999886653
No 210
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=22.89 E-value=88 Score=26.54 Aligned_cols=60 Identities=17% Similarity=0.230 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhCCC-cEEEE-EeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcchhhhhhccc
Q psy5220 142 VGERFIQGAQISLEQKI-PFVCI-TATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMGGVSASFAF 216 (286)
Q Consensus 142 ~~~K~~r~~~~A~~~~i-PlV~l-~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~GGg~~s~a~ 216 (286)
.+..+.++++.+.+.+. +++++ .|.+....+ .+..++..+.+. + +|.||+++||++.+++
T Consensus 87 Lg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~----------~l~~a~~~l~~~--d---~VigPa~dGG~~llg~ 148 (242)
T 3cgx_A 87 LGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCE----------LVQKALNDLQHY--D---AAIGPAFDGGYYLIGF 148 (242)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHH----------HHHHHHHHTTTC--S---EEEEEBTTSSEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHH----------HHHHHHHHhccC--C---eEEEEcCCCCEEEEec
Confidence 55566666666533443 45444 566654431 122223344332 2 6679999999765554
No 211
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=22.59 E-value=20 Score=23.38 Aligned_cols=27 Identities=22% Similarity=0.575 Sum_probs=16.6
Q ss_pred CCchhhhcccccccccchhhccccccccccccC
Q psy5220 23 IPKGLWIKCLSCKTILYKNDLKFNQQVCTKCDY 55 (286)
Q Consensus 23 ~~~~~~~~c~~c~~~~~~~~l~~~~~vc~~~~~ 55 (286)
-+++.| ||++|++.-- .....|.+|-.
T Consensus 7 ~~eD~W-kC~~C~k~N~-----Pl~ryC~rCwa 33 (53)
T 2cr8_A 7 GSEDEW-QCTECKKFNS-----PSKRYCFRCWA 33 (53)
T ss_dssp CCSCCE-ECSSSCCEEC-----SSCCBCTTTCC
T ss_pred CCccee-ecccccccCC-----CccchhHHHHH
Confidence 467889 7999994221 12455666643
No 212
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=22.58 E-value=17 Score=31.59 Aligned_cols=28 Identities=21% Similarity=0.561 Sum_probs=16.6
Q ss_pred hcccccccc-c--chhhccccccccccccCC
Q psy5220 29 IKCLSCKTI-L--YKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 29 ~~c~~c~~~-~--~~~~l~~~~~vc~~~~~~ 56 (286)
.-||.|+.. + |...--.....||.|+..
T Consensus 35 ~yCPnCG~~~l~~f~nN~PVaDF~C~~C~Ee 65 (257)
T 4esj_A 35 SYCPNCGNNPLNHFENNRPVADFYCNHCSEE 65 (257)
T ss_dssp CCCTTTCCSSCEEC----CCCEEECTTTCCE
T ss_pred CcCCCCCChhhhhccCCCcccccccCCcchh
Confidence 679999973 3 222211235779999876
No 213
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=22.47 E-value=1.3e+02 Score=25.49 Aligned_cols=49 Identities=10% Similarity=0.008 Sum_probs=29.1
Q ss_pred HHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCcch
Q psy5220 149 GAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPTMG 208 (286)
Q Consensus 149 ~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~~G 208 (286)
..++|...+.|+|++++....-+ ..+...++.+.+.+++ ..+|.+..-+
T Consensus 153 ~adlA~~l~~pVILV~~~~lg~i----------~~~~lt~~~l~~~g~~-~GvIlN~v~~ 201 (242)
T 3qxc_A 153 MLDFALKLKAKMLLISHDNLGLI----------NDCLLNDFLLKSHQLD-YKIAINLKGN 201 (242)
T ss_dssp HHHHHHHHTCEEEEEECCSTTHH----------HHHHHHHHHHHTSSSC-EEEEECCCTT
T ss_pred HHHHHHHcCCCEEEEEcCCCcHH----------HHHHHHHHHHHhCCCC-EEEEEeCCCC
Confidence 35566777888888887643211 2233334445556778 8887776443
No 214
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=22.34 E-value=21 Score=28.80 Aligned_cols=28 Identities=18% Similarity=0.361 Sum_probs=17.4
Q ss_pred hhcccccccccchhh---ccccccccccccC
Q psy5220 28 WIKCLSCKTILYKND---LKFNQQVCTKCDY 55 (286)
Q Consensus 28 ~~~c~~c~~~~~~~~---l~~~~~vc~~~~~ 55 (286)
..-||.|+..+.... -.....+|+.|+.
T Consensus 3 ~~~C~~CG~~~~~~~~~G~~~~~~~~~~~~~ 33 (189)
T 3cng_A 3 MKFCSQCGGEVILRIPEGDTLPRYICPKCHT 33 (189)
T ss_dssp CCBCTTTCCBCEEECCTTCSSCEEEETTTTE
T ss_pred cccCchhCCccccccccCCCCcceECCCCCC
Confidence 346899998775421 1224577888774
No 215
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=22.24 E-value=15 Score=30.22 Aligned_cols=42 Identities=21% Similarity=0.547 Sum_probs=29.4
Q ss_pred hhcccccccc---cchh-hccccccccccccCCCCCCHHHHHHhhc
Q psy5220 28 WIKCLSCKTI---LYKN-DLKFNQQVCTKCDYHMQIKARDRLNNFL 69 (286)
Q Consensus 28 ~~~c~~c~~~---~~~~-~l~~~~~vc~~~~~~~~~~ar~ri~~L~ 69 (286)
++.|+.|+.+ +-.+ +=....-.|..|+++..++.+..+...+
T Consensus 96 YVlC~~C~sPdT~L~k~~~~r~~~l~C~ACGa~~~V~~~~kl~t~i 141 (170)
T 2g2k_A 96 FVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFI 141 (170)
T ss_dssp HHSCTTTSSSCEEEEEETTTTEEEEEETTTCCCCCSCSSSSHHHHH
T ss_pred eEECCCCCCCccEEEEecCCCEEEEEccccCCccccccccceeeee
Confidence 5899999973 2220 1123567899999999999887776543
No 216
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=21.17 E-value=41 Score=28.88 Aligned_cols=37 Identities=19% Similarity=0.371 Sum_probs=28.1
Q ss_pred EcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCC
Q psy5220 119 IMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATG 167 (286)
Q Consensus 119 i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsg 167 (286)
..+.|=++++.|+.-- ..++..|...+||+|.++||-
T Consensus 154 m~~~Pdll~v~Dp~~e------------~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 154 MTGLPDIVIIVDQQEE------------YTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSCCSEEEESCTTTT------------HHHHHHHHTTTCCEEECCCSS
T ss_pred cccCCCEEEEeCCccc------------cHHHHHHHHhCCCEEEEecCC
Confidence 4456777778886321 367889999999999999874
No 217
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=20.83 E-value=98 Score=24.55 Aligned_cols=27 Identities=15% Similarity=0.234 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCcch
Q psy5220 145 RFIQGAQISLEQKIPFVCITATGGARM 171 (286)
Q Consensus 145 K~~r~~~~A~~~~iPlV~l~dsgGa~i 171 (286)
.+.++++.|.+.+.|+|.+++..+..+
T Consensus 131 ~~~~~~~~ak~~g~~vI~IT~~~~s~L 157 (198)
T 2xbl_A 131 NILAAFREAKAKGMTCVGFTGNRGGEM 157 (198)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCCCTH
T ss_pred HHHHHHHHHHHCCCeEEEEECCCCCcH
Confidence 456677777788888888887665443
No 218
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=20.77 E-value=1.4e+02 Score=27.46 Aligned_cols=52 Identities=12% Similarity=0.129 Sum_probs=31.3
Q ss_pred EEEEEEEcCeeEEEEEEcCcccccCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCC
Q psy5220 113 IVIKGSIMNLPLVVAVFEFEFMGGSMGSVVGERFIQGAQISLEQKIPFVCITATGG 168 (286)
Q Consensus 113 vtG~g~i~G~~v~v~a~d~~~~gGs~~~~~~~K~~r~~~~A~~~~iPlV~l~dsgG 168 (286)
-.-+|+++|++|+++.--+....|. ...++...+++..+.++-.|+.+++.|
T Consensus 152 ~l~~G~l~G~~Vvvm~GrgH~yeg~----~v~~v~a~i~llk~lGV~~II~tgaaG 203 (373)
T 2p4s_A 152 RLVFGYLAGVPVMCMQGRFHHYEGY----PLAKCAMPVRVMHLIGCTHLIATNAAG 203 (373)
T ss_dssp EEEEEEETTEEEEEEESCCCGGGTC----CHHHHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred eeEEEEECCEEEEEEeCCCcCCCCC----CHHHHHHHHHHHHHcCCCEEEEeccEe
Confidence 4556789999999987111112221 122323345666688888888877654
No 219
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.46 E-value=29 Score=23.71 Aligned_cols=27 Identities=26% Similarity=0.737 Sum_probs=17.4
Q ss_pred hhhccccccc--ccchhhccccccccccccC
Q psy5220 27 LWIKCLSCKT--ILYKNDLKFNQQVCTKCDY 55 (286)
Q Consensus 27 ~~~~c~~c~~--~~~~~~l~~~~~vc~~~~~ 55 (286)
+-+|||.|++ .+|.. ....-.|..|+.
T Consensus 14 m~VkCp~C~~~q~VFSh--a~t~V~C~~Cgt 42 (63)
T 3j20_W 14 LRVKCIDCGNEQIVFSH--PATKVRCLICGA 42 (63)
T ss_dssp EEEECSSSCCEEEEESS--CSSCEECSSSCC
T ss_pred EEEECCCCCCeeEEEec--CCeEEEccCcCC
Confidence 4589999997 45543 334556777754
No 220
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=20.46 E-value=1.4e+02 Score=24.76 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=29.2
Q ss_pred HHHHHHhCCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcCCc
Q psy5220 149 GAQISLEQKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTNPT 206 (286)
Q Consensus 149 ~~~~A~~~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g~~ 206 (286)
..++|...+.|+|++++.+...+. ++...+..+.+.++++..+|.+..
T Consensus 132 ~adla~~l~~pviLV~~~~~~~i~----------~~~~~~~~l~~~~~~i~GvIlN~~ 179 (228)
T 3of5_A 132 QLDLIKALQIPVLLVSAIKVGCIN----------HTLLTINELNRHNIKLAGWIANCN 179 (228)
T ss_dssp HHHHHHHHTCCEEEEEECSTTHHH----------HHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred HHHHHHHcCCCEEEEEcCCcchHH----------HHHHHHHHHHhCCCcEEEEEEECc
Confidence 456667778999998887543221 222223334456788888877653
No 221
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=20.18 E-value=24 Score=27.04 Aligned_cols=28 Identities=21% Similarity=0.402 Sum_probs=18.7
Q ss_pred hhcccccccccchhhccccccccccccCC
Q psy5220 28 WIKCLSCKTILYKNDLKFNQQVCTKCDYH 56 (286)
Q Consensus 28 ~~~c~~c~~~~~~~~l~~~~~vc~~~~~~ 56 (286)
-..||.|++.-.... ....+.|++|++.
T Consensus 60 kytCPfCGk~~vKR~-avGIW~C~~Cgk~ 87 (116)
T 3cc2_Z 60 DHACPNCGEDRVDRQ-GTGIWQCSYCDYK 87 (116)
T ss_dssp CEECSSSCCEEEEEE-ETTEEEETTTCCE
T ss_pred CCcCCCCCCceeEec-CceeEECCCCCCE
Confidence 357999998433322 2356789999775
No 222
>1chd_A CHEB methylesterase; chemotaxis protein, serine hydrolase, carboxyl methylesteras; 1.75A {Salmonella typhimurium} SCOP: c.40.1.1
Probab=20.14 E-value=73 Score=26.65 Aligned_cols=33 Identities=9% Similarity=0.136 Sum_probs=26.4
Q ss_pred CCHHHHHHcCccceEeCchhHHHHHHHHHHHHh
Q psy5220 250 QSSEFLLKKGALDMIIDRRKLRFKIANLLALLQ 282 (286)
Q Consensus 250 ~~A~~~~~~G~vD~Vv~~~e~~~~l~~~L~~l~ 282 (286)
+-+..+.+.|.+|.|.+.+++-+.|.+++...+
T Consensus 167 gMP~~Ai~~G~vd~vlpl~~ia~~l~~~~~~~~ 199 (203)
T 1chd_A 167 GMPREAINMGGVSEVVDLSQVSQQMLAKISAGQ 199 (203)
T ss_dssp SHHHHHHHTTCCSEEECGGGHHHHHHHHHTTTT
T ss_pred chHHHHHhcCCccEEeCHHHHHHHHHHHHhcCc
Confidence 446677799999999999999988887765443
No 223
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=20.06 E-value=81 Score=25.76 Aligned_cols=27 Identities=15% Similarity=0.346 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCcc
Q psy5220 144 ERFIQGAQISLEQKIPFVCITATGGAR 170 (286)
Q Consensus 144 ~K~~r~~~~A~~~~iPlV~l~dsgGa~ 170 (286)
..+.++++.|.+.+.|+|.+++..+..
T Consensus 145 ~~~i~~~~~ak~~G~~vIaIT~~~~s~ 171 (212)
T 2i2w_A 145 ANVIKAIAAAREKGMKVITLTGKDGGK 171 (212)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEETTCGG
T ss_pred HHHHHHHHHHHHCCCeEEEEECCCCCc
Confidence 345666677777777777777766543
No 224
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=20.03 E-value=23 Score=30.59 Aligned_cols=16 Identities=38% Similarity=0.746 Sum_probs=13.2
Q ss_pred hhcccccccccchhhc
Q psy5220 28 WIKCLSCKTILYKNDL 43 (286)
Q Consensus 28 ~~~c~~c~~~~~~~~l 43 (286)
.+.||+|+.++|..+.
T Consensus 222 Iv~Cp~CgRIL~~~~~ 237 (256)
T 3na7_A 222 MITCPYCGRILYAEGA 237 (256)
T ss_dssp CEECTTTCCEEECSCC
T ss_pred EEECCCCCeeEEeCcc
Confidence 4789999999998653
No 225
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=20.02 E-value=1.4e+02 Score=26.15 Aligned_cols=47 Identities=19% Similarity=0.296 Sum_probs=31.8
Q ss_pred CCCcEEEEEeCCCcchhhchHhHHHHHHHHHHHHHHhcCCCCEEEEEcC
Q psy5220 156 QKIPFVCITATGGARMQEGLLSLMQMAKTTAILTKLSKKKIPFISVLTN 204 (286)
Q Consensus 156 ~~iPlV~l~dsgGa~i~Eg~~~l~~~~~~~~a~~~l~~~~vP~Isvv~g 204 (286)
.+.|++++..-.++.. |..+.....|+.+.++...+.++|+|.++..
T Consensus 119 ~G~~V~v~a~d~~~~g--Gs~g~~~~~K~~r~ie~A~~~~lPlI~l~ds 165 (285)
T 2f9i_B 119 DGMKFGVAVMDSRFRM--GSMGSVIGEKICRIIDYCTENRLPFILFSAS 165 (285)
T ss_dssp TTEEEEEEEECTTTGG--GCCCHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCEEEEEEEEcccccc--CcCCHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 4678888876655432 3333344567777777777789999999874
Done!