Query psy5221
Match_columns 436
No_of_seqs 384 out of 3006
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 20:29:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5221hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw6_A CAAX prenyl protease 1 100.0 1.4E-34 4.7E-39 292.0 25.2 235 25-284 200-477 (482)
2 3c37_A Peptidase, M48 family; 99.9 2.9E-26 9.8E-31 215.3 13.1 172 64-284 42-226 (253)
3 1gme_A Heat shock protein 16.9 99.9 3.8E-26 1.3E-30 197.1 11.9 105 322-427 41-150 (151)
4 4eld_A MJ16.5-P1, small heat s 99.9 2.1E-25 7.1E-30 195.0 12.7 102 323-427 55-161 (161)
5 3gla_A Low molecular weight he 99.9 1.9E-24 6.5E-29 173.8 13.3 92 322-414 2-97 (100)
6 3aab_A Putative uncharacterize 99.9 1.4E-24 4.6E-29 181.2 9.8 89 323-414 23-115 (123)
7 4fei_A Heat shock protein-rela 99.9 3.4E-24 1.2E-28 172.7 11.3 90 321-414 3-94 (102)
8 3l1e_A Alpha-crystallin A chai 99.9 4.4E-23 1.5E-27 167.0 13.3 97 325-427 3-105 (106)
9 2wj5_A Heat shock protein beta 99.9 7.2E-23 2.5E-27 164.3 11.4 94 326-427 3-99 (101)
10 2klr_A Alpha-crystallin B chai 99.9 9.3E-22 3.2E-26 172.9 9.9 99 326-431 65-166 (175)
11 3q9p_A Heat shock protein beta 99.9 3.5E-21 1.2E-25 149.4 10.8 77 332-413 4-83 (85)
12 3cqb_A Probable protease HTPX 99.8 1.3E-21 4.4E-26 158.6 7.7 99 39-137 3-102 (107)
13 2y1y_A Alpha-crystallin B chai 99.8 1.2E-20 4.3E-25 148.1 11.0 84 332-422 3-89 (90)
14 2bol_A TSP36, small heat shock 99.8 3.7E-20 1.3E-24 176.9 8.4 87 322-415 96-189 (314)
15 2bol_A TSP36, small heat shock 99.7 2.2E-18 7.4E-23 164.8 8.9 88 325-414 221-313 (314)
16 1rl1_A Suppressor of G2 allele 98.5 3.2E-07 1.1E-11 74.7 8.4 79 323-415 8-88 (114)
17 2xcm_C SGT1-like protein, cyto 98.5 3.7E-07 1.3E-11 71.1 7.7 76 325-414 3-80 (92)
18 3igf_A ALL4481 protein; two-do 98.1 7.7E-06 2.6E-10 80.3 8.4 69 324-413 297-368 (374)
19 3eud_A Protein SHQ1; CS domain 98.0 8E-05 2.7E-09 58.9 11.4 77 322-417 15-98 (115)
20 2k8q_A Protein SHQ1; beta-sand 97.9 1.7E-05 5.8E-10 65.1 6.3 75 324-417 3-84 (134)
21 1wh0_A Ubiquitin carboxyl-term 96.7 0.017 5.9E-07 47.7 10.9 87 323-414 18-110 (134)
22 3dte_A IRRE protein; radiotole 96.6 0.01 3.4E-07 56.1 10.5 70 59-135 29-113 (301)
23 1x5m_A Calcyclin-binding prote 96.4 0.038 1.3E-06 45.2 11.2 78 324-415 20-103 (127)
24 2o30_A Nuclear movement protei 96.2 0.041 1.4E-06 45.3 10.7 74 323-414 3-79 (131)
25 1wgv_A KIAA1068 protein; CS do 96.1 0.042 1.4E-06 44.7 10.1 79 322-414 17-100 (124)
26 1ejf_A Progesterone receptor P 96.0 0.062 2.1E-06 43.7 10.6 76 325-415 3-81 (125)
27 1wfi_A Nuclear distribution ge 95.5 0.18 6.3E-06 41.2 11.6 78 321-415 4-87 (131)
28 3qor_A Nuclear migration prote 95.3 0.091 3.1E-06 42.5 8.9 76 322-414 14-95 (121)
29 2rh0_A NUDC domain-containing 95.1 0.13 4.6E-06 43.5 9.8 74 323-414 12-89 (157)
30 2kmw_A Uncharacterized protein 93.8 0.25 8.4E-06 41.5 8.4 76 324-415 4-81 (150)
31 2cg9_X CO-chaperone protein SB 93.3 0.038 1.3E-06 45.6 2.5 82 324-415 6-97 (134)
32 1bud_A Protein (acutolysin A); 76.6 1 3.4E-05 39.5 1.9 17 115-131 130-146 (197)
33 1yp1_A FII; FII hydrolase; 1.9 75.0 1.1 3.9E-05 39.3 1.8 17 115-131 132-148 (202)
34 3e11_A Predicted zincin-like m 73.4 4.4 0.00015 32.0 4.7 35 100-134 67-106 (114)
35 1atl_A Atrolysin C; metalloend 71.3 1.6 5.6E-05 38.3 1.9 17 115-131 133-149 (202)
36 2w15_A Zinc metalloproteinase 71.0 1.7 5.7E-05 38.2 1.9 17 115-131 133-149 (202)
37 2ddf_A ADAM 17; hydrolase; HET 71.0 1.7 5.9E-05 39.6 2.1 18 114-131 178-195 (257)
38 1uze_A Angiotensin converting 70.5 5.3 0.00018 41.2 5.9 66 62-132 277-355 (589)
39 4dd8_A Disintegrin and metallo 69.4 1.7 5.9E-05 38.3 1.7 17 115-131 130-146 (208)
40 1kuf_A Atrolysin E, metallopro 69.2 1.9 6.6E-05 37.8 1.9 17 115-131 135-151 (203)
41 1qua_A Acutolysin-C, hemorrhag 68.1 2.1 7.2E-05 37.4 1.9 17 115-131 132-148 (197)
42 3b8z_A Protein adamts-5; alpha 67.3 2.1 7.1E-05 38.0 1.8 15 117-131 140-154 (217)
43 2ovx_A Matrix metalloproteinas 65.2 2.5 8.5E-05 35.6 1.8 15 117-131 110-124 (159)
44 3dwb_A ECE-1, endothelin-conve 64.8 3.6 0.00012 43.2 3.3 56 73-131 447-514 (670)
45 1ew4_A CYAY protein; friedreic 63.4 3.7 0.00013 32.0 2.3 31 398-435 30-60 (106)
46 2jsd_A Matrix metalloproteinas 63.4 2.8 9.6E-05 35.1 1.8 15 117-131 107-121 (160)
47 1rl6_A Protein (ribosomal prot 63.3 11 0.00039 32.1 5.6 45 348-413 11-55 (177)
48 2v4b_A Adamts-1; zymogen, prot 63.2 2.7 9.2E-05 39.3 1.8 15 117-131 142-156 (300)
49 1r42_A Angiotensin I convertin 63.0 6.3 0.00022 40.8 4.7 66 61-131 304-381 (615)
50 2xs4_A Karilysin protease; hyd 62.8 2.9 0.0001 35.4 1.8 15 117-131 114-128 (167)
51 3zuk_A Endopeptidase, peptidas 62.8 4.1 0.00014 42.9 3.2 58 71-131 467-536 (699)
52 4axq_A Archaemetzincin; metall 62.4 2.7 9.2E-05 35.6 1.4 44 88-131 79-127 (163)
53 2cql_A OK/SW-CL.103, 60S ribos 61.8 12 0.0004 28.8 4.8 46 348-413 20-68 (100)
54 2rjp_A Adamts-4; metalloprotea 61.8 3 0.0001 39.4 1.8 15 117-131 142-156 (316)
55 1r55_A ADAM 33; metalloproteas 61.5 3.3 0.00011 36.6 1.9 16 116-131 134-149 (214)
56 2i47_A ADAM 17; TACE-inhibitor 61.4 3.4 0.00012 38.3 2.1 18 114-131 184-201 (288)
57 1cge_A Fibroblast collagenase; 61.1 3.3 0.00011 35.1 1.8 15 117-131 110-124 (168)
58 2rjq_A Adamts-5; metalloprotea 60.1 3.3 0.00011 40.2 1.8 15 117-131 142-156 (378)
59 1nkw_E 50S ribosomal protein L 60.0 16 0.00056 32.1 6.0 45 348-413 39-83 (212)
60 1hy7_A Stromelysin-1, MMP-3; m 59.9 3.7 0.00013 35.0 1.9 15 117-131 112-126 (173)
61 1c7k_A NCNP, zinc endoprotease 59.1 4.1 0.00014 33.1 1.9 37 90-131 54-90 (132)
62 1r1h_A Neprilysin; enkephalina 58.3 6 0.00021 41.7 3.6 54 74-130 471-536 (696)
63 3oeq_A Frataxin homolog, mitoc 56.9 8.5 0.00029 30.8 3.4 31 398-435 49-79 (123)
64 1hv5_A Stromelysin 3; inhibiti 56.7 4.5 0.00015 34.1 1.9 15 117-131 112-126 (165)
65 2ero_A VAP-1, vascular apoptos 56.5 4.9 0.00017 39.6 2.4 18 114-131 142-159 (427)
66 2e3x_A Coagulation factor X-ac 55.6 5.3 0.00018 39.4 2.4 17 115-131 136-152 (427)
67 1i76_A MMP-8;, neutrophil coll 54.4 5.2 0.00018 33.7 1.9 15 117-131 111-125 (163)
68 2dw0_A Catrocollastatin; apopt 54.1 5.8 0.0002 39.0 2.4 17 115-131 134-150 (419)
69 2nwt_A UPF0165 protein AF_2212 52.7 35 0.0012 24.1 5.6 31 397-430 4-34 (69)
70 3ayu_A 72 kDa type IV collagen 52.7 5.7 0.0002 33.6 1.9 15 117-131 113-127 (167)
71 3k7n_A K-like; SVMP, hydrolase 52.6 5.1 0.00018 39.1 1.8 16 116-131 137-152 (397)
72 1y93_A Macrophage metalloelast 52.4 5.9 0.0002 33.2 1.9 15 117-131 107-121 (159)
73 1slm_A Stromelysin-1; hydrolas 51.8 5.6 0.00019 36.3 1.8 15 117-131 194-208 (255)
74 3k7l_A Atragin; SVMP, metallop 51.2 5.6 0.00019 39.2 1.8 16 116-131 142-157 (422)
75 3dwc_A TCMCP-1, metallocarboxy 50.5 75 0.0026 31.8 9.8 63 64-131 212-274 (505)
76 2y6d_A Matrilysin; hydrolase; 50.4 6.6 0.00022 33.5 1.9 15 117-131 114-128 (174)
77 4fei_A Heat shock protein-rela 50.1 33 0.0011 26.0 5.8 34 336-369 62-96 (102)
78 2ejq_A Hypothetical protein TT 49.9 18 0.00062 29.1 4.4 32 99-130 65-101 (130)
79 830c_A MMP-13, MMP-13; matrix 49.8 6.8 0.00023 33.2 1.9 15 117-131 112-126 (168)
80 3t3l_A Frataxin, mitochondrial 49.0 10 0.00035 30.6 2.7 31 398-434 42-72 (129)
81 1vq8_E 50S ribosomal protein L 48.8 27 0.00091 29.8 5.4 46 348-413 9-54 (178)
82 2gtq_A Aminopeptidase N; alani 48.4 35 0.0012 36.8 7.7 68 64-135 226-304 (867)
83 3j21_F 50S ribosomal protein L 47.8 19 0.00063 31.0 4.3 45 348-412 14-58 (184)
84 2xdt_A Endoplasmic reticulum a 47.2 31 0.001 37.4 7.0 67 64-135 241-319 (897)
85 1rm8_A MMP-16, matrix metallop 46.7 8.1 0.00028 32.6 1.9 16 116-131 115-130 (169)
86 3u9w_A Leukotriene A-4 hydrola 46.2 12 0.00043 38.5 3.6 32 101-134 272-303 (608)
87 3v2d_H 50S ribosomal protein L 45.9 26 0.00089 29.9 5.0 44 348-412 12-55 (180)
88 3ma2_D Matrix metalloproteinas 45.0 8.9 0.00031 32.9 1.9 15 117-131 121-135 (181)
89 3lmc_A Peptidase, zinc-depende 44.8 11 0.00038 33.0 2.5 44 88-131 102-156 (210)
90 4fke_A Aminopeptidase N; zinc 44.7 42 0.0015 36.3 7.6 65 65-134 256-332 (909)
91 3b34_A Aminopeptidase N; prote 43.7 40 0.0014 36.5 7.1 67 64-135 251-329 (891)
92 3gla_A Low molecular weight he 43.4 39 0.0013 25.4 5.2 33 335-367 64-97 (100)
93 3se6_A Endoplasmic reticulum a 43.3 36 0.0012 37.2 6.8 65 65-134 304-380 (967)
94 1z5h_A Tricorn protease intera 43.3 38 0.0013 36.0 6.9 68 64-135 199-276 (780)
95 3sks_A Putative oligoendopepti 42.4 11 0.00037 38.7 2.3 45 82-132 320-367 (567)
96 3q9p_A Heat shock protein beta 42.2 30 0.001 25.3 4.2 32 335-366 50-83 (85)
97 3g5c_A ADAM 22; alpha/beta fol 41.7 9.5 0.00033 38.5 1.8 16 116-131 132-147 (510)
98 2xq0_A LTA-4 hydrolase, leukot 41.5 14 0.00049 38.3 3.1 63 64-134 243-311 (632)
99 4eld_A MJ16.5-P1, small heat s 41.0 37 0.0013 28.2 5.2 35 335-369 117-152 (161)
100 3ahn_A Oligopeptidase, PZ pept 40.9 12 0.00042 38.1 2.5 39 88-131 324-363 (564)
101 3iz5_F 60S ribosomal protein L 40.4 50 0.0017 28.4 5.9 46 348-413 13-60 (190)
102 3cia_A Cold-active aminopeptid 40.3 16 0.00056 37.6 3.4 63 64-134 242-310 (605)
103 2wj5_A Heat shock protein beta 39.6 34 0.0012 26.0 4.3 33 337-369 56-90 (101)
104 3l1e_A Alpha-crystallin A chai 39.4 36 0.0012 26.1 4.5 35 336-370 56-92 (106)
105 3hq2_A Bacillus subtilis M32 c 39.0 18 0.00062 36.2 3.3 64 64-131 209-272 (501)
106 3ebh_A PFA-M1, M1 family amino 38.8 38 0.0013 36.6 6.0 68 64-135 234-312 (889)
107 3u5e_H L8, RP24, YL11, 60S rib 38.7 50 0.0017 28.5 5.6 46 348-413 13-59 (191)
108 3ce2_A Putative peptidase; str 38.5 23 0.00079 36.6 4.2 40 88-132 371-410 (618)
109 1l6j_A Matrix metalloproteinas 38.0 12 0.00041 36.7 1.8 15 117-131 375-389 (425)
110 2cki_A Ulilysin; metalloprotea 37.2 11 0.00039 34.4 1.4 17 118-134 162-179 (262)
111 4ger_A Gentlyase metalloprotea 36.7 11 0.00038 35.1 1.2 66 64-134 73-145 (304)
112 1eak_A 72 kDa type IV collagen 35.2 14 0.00048 36.1 1.8 15 117-131 365-379 (421)
113 1ka2_A M32 carboxypeptidase; h 34.9 28 0.00096 34.9 3.9 63 64-133 212-278 (499)
114 2gjh_A Designed protein; oblig 34.9 23 0.0008 23.0 2.2 20 348-367 32-51 (62)
115 2zkr_e 60S ribosomal protein L 34.8 42 0.0014 29.0 4.5 45 348-413 13-61 (192)
116 3b4r_A Putative zinc metallopr 34.4 16 0.00055 32.4 1.9 14 117-130 47-60 (224)
117 1u4g_A Elastase, pseudolysin; 34.2 13 0.00044 34.7 1.2 63 64-134 83-150 (301)
118 3dnz_A Thermolysin; hydrolase, 34.1 13 0.00045 34.9 1.2 64 64-134 80-152 (316)
119 1bqb_A Protein (aureolysin); h 33.5 13 0.00046 34.6 1.2 40 88-134 112-154 (301)
120 3bbo_I Ribosomal protein L6; l 33.5 17 0.00059 32.2 1.9 46 348-413 54-99 (223)
121 2x7m_A Archaemetzincin; metall 33.1 21 0.00073 30.9 2.4 44 88-131 104-152 (195)
122 1qys_A TOP7; alpha-beta, novel 32.0 42 0.0014 24.1 3.3 20 348-367 76-95 (106)
123 2y1y_A Alpha-crystallin B chai 31.9 33 0.0011 25.3 3.0 33 336-368 50-84 (90)
124 2vqx_A Metalloproteinase; ther 31.7 15 0.00051 34.9 1.2 42 88-134 130-172 (341)
125 2x96_A Angiotensin converting 31.3 57 0.002 33.5 5.7 64 63-131 282-358 (598)
126 3nqx_A MCP-02, secreted metall 30.9 16 0.00054 34.1 1.2 63 64-134 84-151 (306)
127 2qr4_A Peptidase M3B, oligoend 30.1 22 0.00075 36.4 2.3 39 88-131 338-376 (587)
128 1gme_A Heat shock protein 16.9 29.2 82 0.0028 25.7 5.4 35 335-369 104-139 (151)
129 4a17_E RPL9, 60S ribosomal pro 27.4 54 0.0018 28.2 3.9 45 348-412 13-58 (188)
130 2klr_A Alpha-crystallin B chai 27.3 52 0.0018 27.8 3.9 32 337-368 118-151 (175)
131 1y79_1 Peptidyl-dipeptidase DC 27.1 27 0.00093 36.5 2.4 18 113-131 459-476 (680)
132 1sat_A Serratia protease; para 27.1 23 0.00079 35.3 1.8 15 117-131 169-183 (471)
133 2o36_A ThiMet oligopeptidase; 26.8 28 0.00094 36.4 2.4 18 113-131 448-465 (674)
134 3r8s_G 50S ribosomal protein L 26.7 22 0.00075 30.3 1.3 43 348-411 11-53 (176)
135 1g9k_A Serralysin; beta jelly 26.7 24 0.00081 35.1 1.8 14 118-131 163-176 (463)
136 2ks0_A Uncharacterized protein 26.6 29 0.00099 24.8 1.7 22 345-366 17-38 (71)
137 1kap_P Alkaline protease; calc 26.2 25 0.00084 35.1 1.8 14 118-131 179-192 (479)
138 3aab_A Putative uncharacterize 25.4 67 0.0023 25.1 4.0 32 336-367 82-115 (123)
139 3ba0_A Macrophage metalloelast 25.3 17 0.0006 34.8 0.5 15 117-131 106-120 (365)
140 1q5l_A Chaperone protein DNAK; 25.3 1E+02 0.0035 24.6 5.1 34 394-429 96-132 (135)
141 2o3e_A Neurolysin; thermolysin 25.2 31 0.001 36.1 2.4 18 113-131 464-481 (678)
142 1k7i_A PROC, secreted protease 24.6 27 0.00093 34.8 1.8 15 117-131 181-195 (479)
143 1su3_A Interstitial collagenas 24.0 28 0.00097 34.4 1.8 15 117-131 192-206 (450)
No 1
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=100.00 E-value=1.4e-34 Score=291.97 Aligned_cols=235 Identities=20% Similarity=0.247 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhCCCEEecCCCCcchhHHHHHHHHHHHhcCCCCCeEEEEC----C-CccEEEeCCCCC
Q psy5221 25 SIIFGFTGSIISLLLSKKIAKWSMNLMVIKNPSNFTEDWLLKTVNKISKNANISTPEVAIYN----G-EINAFATGAFKN 99 (436)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~L~~~l~~l~~~~g~~~p~v~v~~----~-~~NA~~~G~~~~ 99 (436)
++++.+++.+++.++.|.++...++.. +|.++++ |++.++++|+++|+|.|++||++ + .+|||++|++++
T Consensus 200 ~w~~~~~~~l~~~~iyP~~I~PLfnk~---~Pl~dg~--L~~~Ie~la~~~~fp~~~v~vv~gSkRs~~~NAy~~G~~~~ 274 (482)
T 4aw6_A 200 AWLFTLVVSLVLVTIYADYIAPLFDKF---TPLPEGK--LKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKN 274 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHSCE---EECCSSH--HHHHHHHHHHHTTCCEEEEEEECGGGTBSCCCEEEEESSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC---ccCCcHH--HHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCceEEEcCCCC
Confidence 344444566777788888888888754 2777777 99999999999999999999999 4 899999999999
Q ss_pred ccEEEEcHHHHh------------------------------------hcCHHHHHHHHHHHHHhhhcChHHHHHHHHHH
Q psy5221 100 SSLIAISANLLE------------------------------------SMTKLEIKAIIAHEISHISNGDMVTMLLIQGV 143 (436)
Q Consensus 100 ~~~v~it~gLl~------------------------------------~l~~~El~aVLAHElgHi~~~h~~~~~~~~~~ 143 (436)
+++|+++++|.+ .|+++|++||+|||+||++++|+.++.++..
T Consensus 275 krIVl~dtLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~El~aVlaHElgH~~~~~~~~~~~~~~- 353 (482)
T 4aw6_A 275 KRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQ- 353 (482)
T ss_dssp EEEEEEHHHHC------------------------------------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHH-
T ss_pred cEEEEEchHHHhcccccccccccccccccccccccchhhcccchhhccCCCHHHHHHHHHHHHHHHHcccHHHHHHHHH-
Confidence 998888874444 1899999999999999999999999888755
Q ss_pred HHHHHHHHHHHHHHHHHh--hhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcHhhhhhcCC
Q psy5221 144 INTFIILISRIFSYILDC--FLLNSYDDSNYNSNYNHKIYGLITTILQIFLGFGASIVVAWFSRNREFRADHGSAKLLGT 221 (436)
Q Consensus 144 ~~~~~~~~~~i~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SR~~E~~AD~~a~~~~g~ 221 (436)
+.+++.++ +++.+..+ .+.+.|..+ .++..++.+++...+..++..++.++.+.+||.+|++||++|+++ |+
T Consensus 354 i~~~~~~~--l~~~l~~~~~l~~~~G~~~---~~p~~~~~llv~~~i~~P~~~l~~~i~~~~SR~~E~eAD~~a~~l-g~ 427 (482)
T 4aw6_A 354 MNSFLCFF--LFAVLIGRKELFAAFGFYD---SQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKL-GK 427 (482)
T ss_dssp HHHHHHHH--HHHHHTTCSHHHHHTTCCS---CCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TT
T ss_pred HHHHHHHH--HHHHHHcchhhHhhcCCCC---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHc-CC
Confidence 33333332 23333322 111111211 112222332223333344456788899999999999999999999 67
Q ss_pred chHHHHHHHHhhcccccCCChhhhhhhcccCcccchhhhhhhccCCChHHHHHHHHhcccccc
Q psy5221 222 PDPMISALRHLSNISIVNDLPKSIAILGINNNFKKKSFLKLFATHPSFEKRIAILSLLKLSLY 284 (436)
Q Consensus 222 ~~~l~~aL~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tHP~~~~RI~~L~~~~~~~~ 284 (436)
|+++++||.|++..+.....++ ..+..+++|||++.+||++|++..++.+
T Consensus 428 p~~L~~AL~KL~~~n~s~~~~~-------------~~~~~~~sTHP~~~eRI~~L~~~~~~~~ 477 (482)
T 4aw6_A 428 AKDLYSALIKLNKDNLGFPVSD-------------WLFSMWHYSHPPLLERLQALKTMKQHAE 477 (482)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCC-------------HHHHHHSCSSCCHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHhcccCCCCC-------------hHHHHHhcCCcCHHHHHHHHHHhhHhhh
Confidence 9999999999998764333322 2367899999999999999998876653
No 2
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=99.93 E-value=2.9e-26 Score=215.33 Aligned_cols=172 Identities=21% Similarity=0.271 Sum_probs=116.5
Q ss_pred HHHHHHHHHHhcCCCC------CeEEEECC-CccEEEeCCCCCccEEEEcHHHHhhc-CHHHHHHHHHHHHHhhhcChHH
Q psy5221 64 LLKTVNKISKNANIST------PEVAIYNG-EINAFATGAFKNSSLIAISANLLESM-TKLEIKAIIAHEISHISNGDMV 135 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~------p~v~v~~~-~~NA~~~G~~~~~~~v~it~gLl~~l-~~~El~aVLAHElgHi~~~h~~ 135 (436)
+++.|++++++++.+. .++||+++ .+|||++|. +.|++++||++.+ |++||+||||||+||++++|..
T Consensus 42 l~~~l~~l~~~l~~~~~~~~~~~~v~v~~~~~~NAfa~~g----g~I~v~~gLl~~l~~~~ELaaVLaHElgH~~~~H~~ 117 (253)
T 3c37_A 42 VQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSVNAFAIPG----GRVYVHTGLLKAADNETELAGVLAHEINHAVARHGT 117 (253)
T ss_dssp HHHHHHHHHHHHHHTSSCCCSCCEEEEECCCSCCEEEETT----TEEEEEHHHHHHCSSHHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEEeCCCCCeeEcCC----CeEEeeHHHHhhCCCHHHHHHHHHHHHHHHHCcCHH
Confidence 7888888887755432 39999999 999999973 4699999999999 9999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHhcHh
Q psy5221 136 TMLLIQGVINTFIILISRIFSYILDCFLLNSYDDSNYNSNYNHKIYGLITTILQIFLGFGAS-IVVAWFSRNREFRADHG 214 (436)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~SR~~E~~AD~~ 214 (436)
+++.... .+.. +++. +.| .. . .++++ + +..... ++.+.+||.+|++||++
T Consensus 118 ~~~~~~~---~~~~----l~~~-----~~g--~~---~---~~~~~------~---~~~~~~~~~~~~~SR~~E~eAD~~ 168 (253)
T 3c37_A 118 RQMTQEY---GYSL----VLSL-----VLG--DN---P---NMLAQ------L---AGQLFGKAGMMSYSREYENQADFL 168 (253)
T ss_dssp HHHHHHH---CHHH----HHHH-----HHT--CC---H-----HHH------H---HHHHHSSSCCCCCCHHHHHHHHHH
T ss_pred HHHHHHH---HHHH----HHHH-----HhC--CC---c---hhHHH------H---HHHHHHHHHhccccHHHHHHHHHH
Confidence 8655432 1111 1111 121 00 0 01110 0 111111 23577999999999999
Q ss_pred hhhhc----CCchHHHHHHHHhhcccccCCChhhhhhhcccCcccchhhhhhhccCCChHHHHHHHHhcccccc
Q psy5221 215 SAKLL----GTPDPMISALRHLSNISIVNDLPKSIAILGINNNFKKKSFLKLFATHPSFEKRIAILSLLKLSLY 284 (436)
Q Consensus 215 a~~~~----g~~~~l~~aL~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tHP~~~~RI~~L~~~~~~~~ 284 (436)
|++++ ++|.+++++|.||...+... + .....|++|||++.+||++|++...+..
T Consensus 169 a~~~~~~ag~~p~~l~~~l~kl~~~~~~~--~--------------~~~~~~~sTHP~~~~Ri~~l~~~~~~~~ 226 (253)
T 3c37_A 169 GVETMYKAGYNPNGLTSFFQKLNAMDGGT--Q--------------SNVARFFSTHPLTSERIQRVQAEIAKLP 226 (253)
T ss_dssp HHHHHHHTTSCTTHHHHHHHHHTC------------------------------CCCCCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhcC--C--------------CcccHHhcCCcChHHHHHHHHHHHHhcc
Confidence 99995 58999999999998763110 0 1235689999999999999998877664
No 3
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.93 E-value=3.8e-26 Score=197.06 Aligned_cols=105 Identities=14% Similarity=0.305 Sum_probs=92.2
Q ss_pred CCCCceeEEEecCceEEEEEecCCCCCCceEEEEE-CCEEEEEEEEecc--cCCCceEEEeeeeeeEEEEEECCCccc--
Q psy5221 322 QSYPPYNIELVDENKYRITMAIAGFNRSDLEIETE-RDTLRITGRKQAD--TQQRNFLHRGIATRNFEHRFQLADHVH-- 396 (436)
Q Consensus 322 ~~~p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~-~~~l~i~g~~~~~--~~~~~~~~~e~~~~~f~r~~~lP~~v~-- 396 (436)
.+.|++||+ |++++|+|.++|||++||||+|+++ ++.|+|+|+++.+ .++.+|+++||.+|+|+|+|.||+++|
T Consensus 41 ~~~p~~di~-e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~ 119 (151)
T 1gme_A 41 FANARMDWK-ETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVE 119 (151)
T ss_dssp HGGGCEEEE-ECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGG
T ss_pred ccCCceEEE-EcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcccc
Confidence 357999999 5999999999999999999999995 6799999998765 346789999999999999999999999
Q ss_pred eEeEEeeCcEEEEEEecCCCCCCCCeEeeec
Q psy5221 397 VVAAFFDQGILNIDLIREVPEALKPRKIYIN 427 (436)
Q Consensus 397 ~~~A~~~~GvL~i~~pk~~~~~~~~~~I~I~ 427 (436)
.++|+|+||+|+|++||..++..+.++|+|+
T Consensus 120 ~i~A~~~nGvL~I~lPK~~~~~~~~~~I~I~ 150 (151)
T 1gme_A 120 EVKAGLENGVLTVTVPKAEVKKPEVKAIQIS 150 (151)
T ss_dssp GCEEEEETTEEEEEEECCCCCTTCCCCCCCC
T ss_pred ceEEEEECCEEEEEEEccCcCCCCCeEeeeC
Confidence 4999999999999999965544456778775
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.92 E-value=2.1e-25 Score=194.99 Aligned_cols=102 Identities=21% Similarity=0.363 Sum_probs=92.4
Q ss_pred CCCceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecc--cCCCceEEEee-eeeeEEEEEECCCccc--e
Q psy5221 323 SYPPYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQAD--TQQRNFLHRGI-ATRNFEHRFQLADHVH--V 397 (436)
Q Consensus 323 ~~p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~--~~~~~~~~~e~-~~~~f~r~~~lP~~v~--~ 397 (436)
.++|+||+ |++++|+|.++|||++||||+|+++++.|+|+|+++.+ .++.+|+++|| .+|+|+|+|.||.+|| .
T Consensus 55 ~~~pvdi~-e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~ 133 (161)
T 4eld_A 55 GFMPISII-EGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEEN 133 (161)
T ss_dssp SCCCEEEE-ECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGG
T ss_pred cccceeEE-EeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCccccc
Confidence 45669999 59999999999999999999999999999999998874 35678999999 9999999999999999 4
Q ss_pred EeEEeeCcEEEEEEecCCCCCCCCeEeeec
Q psy5221 398 VAAFFDQGILNIDLIREVPEALKPRKIYIN 427 (436)
Q Consensus 398 ~~A~~~~GvL~i~~pk~~~~~~~~~~I~I~ 427 (436)
++|+|+||||+|++|| .++.++|+|+|+
T Consensus 134 i~A~~~nGvL~I~lpK--~~~~~~r~I~Ie 161 (161)
T 4eld_A 134 ASAKFENGVLSVILPK--AESSIKKGINIE 161 (161)
T ss_dssp CEEEEETTEEEEEEEB--CGGGSCCCCCCC
T ss_pred EEEEEECCEEEEEEEc--CCCCCCcEeecC
Confidence 9999999999999999 556678999985
No 5
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.92 E-value=1.9e-24 Score=173.80 Aligned_cols=92 Identities=23% Similarity=0.433 Sum_probs=85.5
Q ss_pred CCCCceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecc--cCCCceEEEeeeeeeEEEEEECCCccc--e
Q psy5221 322 QSYPPYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQAD--TQQRNFLHRGIATRNFEHRFQLADHVH--V 397 (436)
Q Consensus 322 ~~~p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~--~~~~~~~~~e~~~~~f~r~~~lP~~v~--~ 397 (436)
.|.|++||+ |++++|+|.++|||+++|||+|+++++.|+|+|+++.+ .++.+|+++||.+|+|+|+|.||.++| .
T Consensus 2 ~~~P~~di~-e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIK-EEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEE-ECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEE-ECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 578999999 59999999999999999999999999999999999875 345789999999999999999999999 4
Q ss_pred EeEEeeCcEEEEEEecC
Q psy5221 398 VAAFFDQGILNIDLIRE 414 (436)
Q Consensus 398 ~~A~~~~GvL~i~~pk~ 414 (436)
++|+|+||+|+|++||.
T Consensus 81 i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp CEEEEETTEEEEEEEBC
T ss_pred eEEEEeCCEEEEEEecC
Confidence 99999999999999994
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.91 E-value=1.4e-24 Score=181.21 Aligned_cols=89 Identities=16% Similarity=0.288 Sum_probs=83.2
Q ss_pred CCCceeEEEecCceEEEEEecCCCCCCceEEEEEC-CEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eE-
Q psy5221 323 SYPPYNIELVDENKYRITMAIAGFNRSDLEIETER-DTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VV- 398 (436)
Q Consensus 323 ~~p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~-~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~- 398 (436)
++|++||+ |++++|+|.++|||++||||+|++++ +.|+|+|+++.+. +.+|+++||.+ +|+|+|.||.++| .+
T Consensus 23 ~~P~~di~-e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~-~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~ 99 (123)
T 3aab_A 23 VYPPVDMY-EEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE-PGVKYLTQRPK-YVRKVIRLPYNVAKDAEI 99 (123)
T ss_dssp HCSCEEEE-EETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC-CSCEEEECSCS-EEEEEEECSSEECTTCCC
T ss_pred CCCcEEEE-EcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC-CCeEEEEEEeE-EEEEEEECCCCcCcchhC
Confidence 46999999 58999999999999999999999999 9999999988765 78899999999 9999999999998 48
Q ss_pred eEEeeCcEEEEEEecC
Q psy5221 399 AAFFDQGILNIDLIRE 414 (436)
Q Consensus 399 ~A~~~~GvL~i~~pk~ 414 (436)
+|+|+||+|+|++||.
T Consensus 100 ~A~~~~GvL~I~lPK~ 115 (123)
T 3aab_A 100 SGKYENGVLTIRIPIA 115 (123)
T ss_dssp EEEEETTEEEEEEEGG
T ss_pred eeEEcCCEEEEEEEcC
Confidence 9999999999999994
No 7
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.91 E-value=3.4e-24 Score=172.68 Aligned_cols=90 Identities=12% Similarity=0.275 Sum_probs=83.5
Q ss_pred CCCCCceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eE
Q psy5221 321 QQSYPPYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VV 398 (436)
Q Consensus 321 ~~~~p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~ 398 (436)
..+.|++||+ |++++|+|.++|||+++|||+|+++++.|+|+|+++. +.+|+++||.+|+|+|+|.||.++| .+
T Consensus 3 g~~~P~~di~-e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~---~~~~~~~er~~g~f~R~~~LP~~vd~~~i 78 (102)
T 4fei_A 3 GPWTPAADWR-DAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPG---TEHLLRSERPSGRFVRELAFPEPVRPASG 78 (102)
T ss_dssp EECCCCEEEE-EETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECC---CSSCSSCCSEEEEEEEEEECSSCBCTTCC
T ss_pred CcccCcEEEE-EcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEec---CCCEEEEEEeccEEEEEEECCCCcchhHc
Confidence 3578999999 5899999999999999999999999999999999964 4678899999999999999999999 59
Q ss_pred eEEeeCcEEEEEEecC
Q psy5221 399 AAFFDQGILNIDLIRE 414 (436)
Q Consensus 399 ~A~~~~GvL~i~~pk~ 414 (436)
+|+|+||+|+|++||.
T Consensus 79 ~A~~~~GvL~I~lpK~ 94 (102)
T 4fei_A 79 VASLAGGVLTVRFEKL 94 (102)
T ss_dssp EEEEETTEEEEEEEBS
T ss_pred EEEEECCEEEEEEEcc
Confidence 9999999999999994
No 8
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.90 E-value=4.4e-23 Score=166.98 Aligned_cols=97 Identities=19% Similarity=0.409 Sum_probs=84.1
Q ss_pred CceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eEeEEe
Q psy5221 325 PPYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VVAAFF 402 (436)
Q Consensus 325 p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~~A~~ 402 (436)
...||+ |++++|+|.++||||+||||+|+++++.|+|+|+++...++.+|+++ +|+|+|.||+++| .++|+|
T Consensus 3 g~~~i~-e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~-----eF~R~~~LP~~vd~~~i~A~~ 76 (106)
T 3l1e_A 3 GISEVR-SDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISR-----EFHRRYRLPSNVDQSALSCSL 76 (106)
T ss_dssp CSEEEE-ECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEE-----EEEEEEECCTTBCTTSCEEEE
T ss_pred CceEEE-EcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEE-----EEEEEEECCCCcChhHcEEEE
Confidence 458999 59999999999999999999999999999999998765555566544 4999999999999 499999
Q ss_pred -eCcEEEEEEecCCCCC---CCCeEeeec
Q psy5221 403 -DQGILNIDLIREVPEA---LKPRKIYIN 427 (436)
Q Consensus 403 -~~GvL~i~~pk~~~~~---~~~~~I~I~ 427 (436)
+||+|+|++||..++. .++|+|+|+
T Consensus 77 s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 77 SADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp CTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred CCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 8999999999975542 478999996
No 9
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.89 E-value=7.2e-23 Score=164.32 Aligned_cols=94 Identities=16% Similarity=0.349 Sum_probs=80.8
Q ss_pred ceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eEeEEe-
Q psy5221 326 PYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VVAAFF- 402 (436)
Q Consensus 326 ~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~~A~~- 402 (436)
.+||+ |++++|+|.++|||+++|||+|+++++.|+|+|+++.+.++.+|+++| |+|+|.||+++| .++|+|
T Consensus 3 ~vdi~-e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~~s 76 (101)
T 2wj5_A 3 MAQVP-TDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIARE-----FHRRYRLPPGVDPAAVTSALS 76 (101)
T ss_dssp CCCCC-CCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEE-----EEEEEECCTTBCTTCCEEEEC
T ss_pred cEEEE-EeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEE-----EEEEEECCCCcChhHCEEEEC
Confidence 57999 599999999999999999999999999999999998766666777655 999999999999 499999
Q ss_pred eCcEEEEEEecCCCCCCCCeEeeec
Q psy5221 403 DQGILNIDLIREVPEALKPRKIYIN 427 (436)
Q Consensus 403 ~~GvL~i~~pk~~~~~~~~~~I~I~ 427 (436)
+||+|+|++|| .++.++++++|.
T Consensus 77 ~nGvL~I~lPK--~~~~~~~~~~i~ 99 (101)
T 2wj5_A 77 PEGVLSIQATP--ASAQASLPSPPA 99 (101)
T ss_dssp TTSEEEEEECB--CCCCCSSCC---
T ss_pred CCCEEEEEEEC--CCcCCCCCCccc
Confidence 89999999999 455667777664
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.86 E-value=9.3e-22 Score=172.86 Aligned_cols=99 Identities=14% Similarity=0.437 Sum_probs=71.6
Q ss_pred ceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eEeEEe-
Q psy5221 326 PYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VVAAFF- 402 (436)
Q Consensus 326 ~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~~A~~- 402 (436)
.+||+ |++++|+|.++||||+||||+|++++|.|+|+|+++.+.++.+|+++| |+|+|.||++|| .|+|+|
T Consensus 65 ~~dv~-e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~re-----F~R~~~LP~~Vd~~~i~A~~s 138 (175)
T 2klr_A 65 LSEMR-LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISRE-----FHRKYRIPADVDPLTITSSLS 138 (175)
T ss_dssp ----C-CCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEE-----EEEEEECTTTCCTTTCEEEEC
T ss_pred ceEEE-EcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEE-----EEEEEECCCCcChhHeEEEEc
Confidence 47998 599999999999999999999999999999999997765566676554 999999999999 499999
Q ss_pred eCcEEEEEEecCCCCCCCCeEeeecCCCC
Q psy5221 403 DQGILNIDLIREVPEALKPRKIYINTTKN 431 (436)
Q Consensus 403 ~~GvL~i~~pk~~~~~~~~~~I~I~~~~~ 431 (436)
+||||+|++||... +.++|+|+|+.++.
T Consensus 139 ~dGvL~I~lPK~~~-~~~~r~I~I~~~~~ 166 (175)
T 2klr_A 139 SDGVLTVNGPRKQV-SGPERTIPITREEK 166 (175)
T ss_dssp TTSCEEEEEECC-----------------
T ss_pred CCCEEEEEEECCCC-CCCCeEEEEecCCc
Confidence 79999999999532 23469999986543
No 11
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.85 E-value=3.5e-21 Score=149.41 Aligned_cols=77 Identities=19% Similarity=0.458 Sum_probs=66.3
Q ss_pred ecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eEeEEee-CcEEE
Q psy5221 332 VDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VVAAFFD-QGILN 408 (436)
Q Consensus 332 e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~~A~~~-~GvL~ 408 (436)
|++++|.|.++||||+||||+|+++++.|+|+|+++.+.++.+ ..+|+|+|+|.||++|| .++|.|+ ||+|+
T Consensus 4 E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~-----~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~ 78 (85)
T 3q9p_A 4 HTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHG-----YISRCFTRKYTLPPGVDPTQVSSSLSPEGTLT 78 (85)
T ss_dssp CCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC------------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEE
T ss_pred CcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCC-----EEEEEEEEEEECCCCcChHHcEEEECCCCEEE
Confidence 6899999999999999999999999999999999876544333 34789999999999999 4999998 99999
Q ss_pred EEEec
Q psy5221 409 IDLIR 413 (436)
Q Consensus 409 i~~pk 413 (436)
|++||
T Consensus 79 I~lPK 83 (85)
T 3q9p_A 79 VEAPM 83 (85)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99999
No 12
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=1.3e-21 Score=158.62 Aligned_cols=99 Identities=55% Similarity=0.804 Sum_probs=88.0
Q ss_pred hHHHHHHHhCCCEEecCCCCcchhHHHHHHHHHHHhcCCCCCeEEEECC-CccEEEeCCCCCccEEEEcHHHHhhcCHHH
Q psy5221 39 LSKKIAKWSMNLMVIKNPSNFTEDWLLKTVNKISKNANISTPEVAIYNG-EINAFATGAFKNSSLIAISANLLESMTKLE 117 (436)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~L~~~l~~l~~~~g~~~p~v~v~~~-~~NA~~~G~~~~~~~v~it~gLl~~l~~~E 117 (436)
++++++.++++++.++.|..+.++.|++.++++|+++|++.|++|++++ .+|||++|.++.+++|++++||++.++++|
T Consensus 3 ~s~~~~~~~~g~~~~~~~~~~~~~~L~~~~~~l~~~~~~~~~~v~v~~~~~~NAf~~g~~~~~~~i~v~~gLl~~l~~~E 82 (107)
T 3cqb_A 3 ASKGMALRSVGGMVIESPRNETEHWLLETVGRQAQQAGIGMPTVAIYDSADINAFATGAKRDDSLVAVSTGLLHNMTRDE 82 (107)
T ss_dssp TTTTSCCCCCTTEECSSCSSHHHHHHHHHHHHHHHHHTCCCCEEEEECCSSEEEEEECCC--CCEEEEEHHHHHHSCHHH
T ss_pred ccHHHHHHHcCCccCCCccchhHHHHHHHHHHHHHHcCCCCCeEEEEECCCcCEEEEecCCCCCEEEEcHHHHhhCCHHH
Confidence 4567778889999998776655677999999999999999999999999 999999999887889999999999999999
Q ss_pred HHHHHHHHHHhhhcChHHHH
Q psy5221 118 IKAIIAHEISHISNGDMVTM 137 (436)
Q Consensus 118 l~aVLAHElgHi~~~h~~~~ 137 (436)
++||||||+||++++|..++
T Consensus 83 l~aVlaHElgH~~~~h~~~~ 102 (107)
T 3cqb_A 83 AEAVLAHEVSHIANGDMVTM 102 (107)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHH
Confidence 99999999999999998653
No 13
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.84 E-value=1.2e-20 Score=148.07 Aligned_cols=84 Identities=14% Similarity=0.530 Sum_probs=68.2
Q ss_pred ecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eEeEEe-eCcEEE
Q psy5221 332 VDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VVAAFF-DQGILN 408 (436)
Q Consensus 332 e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~~A~~-~~GvL~ 408 (436)
+++++|+|.++|||+++|||+|+++++.|+|+|+++.+.++.+|+++ +|+|+|.||.+|| .++|+| +||+|+
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~GvL~ 77 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISR-----EFHRKYRIPADVDPLTITSSMSSDGVLT 77 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTSEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEE-----EEEEEEECCCCcChhHcEEEECCCCEEE
Confidence 57899999999999999999999999999999998876556677654 4999999999999 499999 899999
Q ss_pred EEEecCCCCCCCCe
Q psy5221 409 IDLIREVPEALKPR 422 (436)
Q Consensus 409 i~~pk~~~~~~~~~ 422 (436)
|++||. +..+|+
T Consensus 78 I~~pK~--~~~~p~ 89 (90)
T 2y1y_A 78 VNGPRK--QVSGPE 89 (90)
T ss_dssp EEECBC--------
T ss_pred EEEEcC--CCCCCC
Confidence 999994 444444
No 14
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.80 E-value=3.7e-20 Score=176.95 Aligned_cols=87 Identities=10% Similarity=0.185 Sum_probs=77.6
Q ss_pred CCCCceeEEEecCc----eEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc-
Q psy5221 322 QSYPPYNIELVDEN----KYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH- 396 (436)
Q Consensus 322 ~~~p~~~i~~e~~~----~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~- 396 (436)
.+.|++||++ +++ +|+|.++||||+||||+|++++|.|+|+|+++.+.+++ +.+|+|+|+|.||++||
T Consensus 96 ~~~p~vDi~E-~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~------r~~g~F~R~~~LP~~Vd~ 168 (314)
T 2bol_A 96 ELDFLKDAYE-VGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDA------AMSESVGRSIPLPPSVDR 168 (314)
T ss_dssp TTGGGGGCEE-ECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCC------CBCCCEEEEEECCTTBCG
T ss_pred cCCCccceEE-cCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCC------EEEEEEEEEEECCCCccc
Confidence 3679999995 777 99999999999999999999999999999998654432 77999999999999999
Q ss_pred -eEeEEee-CcEEEEEEecCC
Q psy5221 397 -VVAAFFD-QGILNIDLIREV 415 (436)
Q Consensus 397 -~~~A~~~-~GvL~i~~pk~~ 415 (436)
.|+|+|+ ||||+|++||..
T Consensus 169 e~i~A~~~~nGVL~I~lPK~~ 189 (314)
T 2bol_A 169 NHIQATITTDDVLVIEAPVNE 189 (314)
T ss_dssp GGCEEEECSSSEEEEEEEBSS
T ss_pred cccEEEEeCCCEEEEEEeccC
Confidence 4999999 999999999953
No 15
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.74 E-value=2.2e-18 Score=164.78 Aligned_cols=88 Identities=13% Similarity=0.177 Sum_probs=69.2
Q ss_pred CceeEEEe--cCceEEEEEec-CCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eEe
Q psy5221 325 PPYNIELV--DENKYRITMAI-AGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VVA 399 (436)
Q Consensus 325 p~~~i~~e--~~~~~~v~~~l-pG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~~ 399 (436)
..++|.++ ++++|.+.++| ||++||||+|++++|.|+|+|+++.+.+ +++++||.+|+|+|+|.||++|| .|+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~--~~~~~Er~~g~F~R~~~LP~~vd~~~i~ 298 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEK--TENASHSEHREFYKAFVTPEVVDASKTQ 298 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC--------------CEEEEEEEECSSEECGGGCE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCC--ceEEEEEeeeEEEEEEECCCCcChHHeE
Confidence 44777742 45689999999 9999999999999999999999986543 57889999999999999999999 499
Q ss_pred EEeeCcEEEEEEecC
Q psy5221 400 AFFDQGILNIDLIRE 414 (436)
Q Consensus 400 A~~~~GvL~i~~pk~ 414 (436)
|+|+||||+|++||.
T Consensus 299 A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 299 AEIVDGLMVVEAPLF 313 (314)
T ss_dssp EEEETTEEEEEEEEE
T ss_pred EEEeCCEEEEEEecC
Confidence 999999999999993
No 16
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.51 E-value=3.2e-07 Score=74.66 Aligned_cols=79 Identities=15% Similarity=0.185 Sum_probs=68.2
Q ss_pred CCCceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccce--EeE
Q psy5221 323 SYPPYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHV--VAA 400 (436)
Q Consensus 323 ~~p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~--~~A 400 (436)
..|.++.++ +++.+.|.+++||++++|++|+++++.|.|++... + ...|...+.|+..|+. .++
T Consensus 8 ~~~~~~W~Q-t~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~---~----------~~~y~~~~~L~~~I~~e~s~~ 73 (114)
T 1rl1_A 8 SKIKYDWYQ-TESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP---S----------GEDYNLKLELLHPIIPEQSTF 73 (114)
T ss_dssp CCCCEEEEE-CSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT---T----------SSEEEEEECBSSCCCGGGEEE
T ss_pred CCCCccEEe-CCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC---C----------CcEEEEEeeCCCcCCccccEE
Confidence 347799996 89999999999999999999999999999998642 1 1257788999999994 999
Q ss_pred EeeCcEEEEEEecCC
Q psy5221 401 FFDQGILNIDLIREV 415 (436)
Q Consensus 401 ~~~~GvL~i~~pk~~ 415 (436)
++.+|.|+|+|+|..
T Consensus 74 ~~~~~~l~i~L~K~~ 88 (114)
T 1rl1_A 74 KVLSTKIEIKLKKPE 88 (114)
T ss_dssp EECSSSEEEEEECSS
T ss_pred EEECCEEEEEEEcCC
Confidence 999999999999953
No 17
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.47 E-value=3.7e-07 Score=71.14 Aligned_cols=76 Identities=9% Similarity=0.041 Sum_probs=66.1
Q ss_pred CceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccce--EeEEe
Q psy5221 325 PPYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHV--VAAFF 402 (436)
Q Consensus 325 p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~--~~A~~ 402 (436)
|.++.++ +++.+.|.+.+||++++|++|+++++.|.|++... + ...|...+.|+..|+. .++++
T Consensus 3 ~~~~W~Q-t~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~---~----------~~~y~~~~~L~~~I~~~~s~~~~ 68 (92)
T 2xcm_C 3 YRHEYYQ-KPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP---G----------EDAYYLQPRLFGKIIPDKCKYEV 68 (92)
T ss_dssp SEEEEEE-ETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT---T----------SCCEEECCBBSSCBCGGGCEEEE
T ss_pred ccccEEe-CCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC---C----------CcEEEEeeEcCCccCchhEEEEE
Confidence 6789996 89999999999999999999999999999997642 1 1257788899999994 89999
Q ss_pred eCcEEEEEEecC
Q psy5221 403 DQGILNIDLIRE 414 (436)
Q Consensus 403 ~~GvL~i~~pk~ 414 (436)
.+|.|+|+|+|.
T Consensus 69 ~~~~l~i~L~K~ 80 (92)
T 2xcm_C 69 LSTKIEICLAKA 80 (92)
T ss_dssp CSSCEEEEEEBS
T ss_pred ECCEEEEEEEcC
Confidence 999999999994
No 18
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.06 E-value=7.7e-06 Score=80.33 Aligned_cols=69 Identities=13% Similarity=0.325 Sum_probs=62.1
Q ss_pred CCceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc---eEeE
Q psy5221 324 YPPYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH---VVAA 400 (436)
Q Consensus 324 ~p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~---~~~A 400 (436)
.+|+.|.+ . .|.+++.|||++|++|++.-.|+.|+|+ .|.|+|.+.||.... ...|
T Consensus 297 ~~~~~i~~--~-~~~~~l~lP~~~~~~~~l~~~gdeL~v~------------------~g~~rR~i~LP~~L~~~~v~~A 355 (374)
T 3igf_A 297 PKPITIDT--H-NRQVRLFLPGFDKKQVKLTQYGPEVTVE------------------AGDQRRNIFLPPALSGRPITGA 355 (374)
T ss_dssp CCSEEEET--T-TTEEEEECTTCCGGGCEEEEETTEEEEE------------------ETTEEEEEECCTTTTTCCEEEE
T ss_pred CCCEEEEe--c-cEEEEEECCCCCHHHeEEEEECCeEEEE------------------ECCEeecccCCHHHcCCCcccc
Confidence 46777753 3 7999999999999999999999999999 899999999999877 5999
Q ss_pred EeeCcEEEEEEec
Q psy5221 401 FFDQGILNIDLIR 413 (436)
Q Consensus 401 ~~~~GvL~i~~pk 413 (436)
+|+||.|+|++-.
T Consensus 356 ~~~~~~L~i~~~~ 368 (374)
T 3igf_A 356 KFQNNYLIISFLE 368 (374)
T ss_dssp EEETTEEEEEECC
T ss_pred EEECCEEEEEEeh
Confidence 9999999999965
No 19
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.00 E-value=8e-05 Score=58.93 Aligned_cols=77 Identities=16% Similarity=0.254 Sum_probs=65.5
Q ss_pred CCCCceeEEEecCceEEEEEecCCCC--CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc---
Q psy5221 322 QSYPPYNIELVDENKYRITMAIAGFN--RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--- 396 (436)
Q Consensus 322 ~~~p~~~i~~e~~~~~~v~~~lpG~~--~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--- 396 (436)
-..|.+.+.+ +++.+.|.+-+|-++ ..++++.++|+.+... ...|.-++.||..+-
T Consensus 15 ~iTP~F~itQ-Ddefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~------------------~~PYyLRL~lP~~vved~ 75 (115)
T 3eud_A 15 MITPRFSITQ-DEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH------------------LSPYYLRLRFPHELIDDE 75 (115)
T ss_dssp CBCCCEEEEE-CSSEEEEEEECCSCCCCSSSCEEEEETTEEEEE------------------ETTEEEEEECSSCEECST
T ss_pred EeCCcEEEEE-CCCEEEEEEEcCceecccCccEEEEeCCEEEEe------------------cCCeEEEEecCcceecCC
Confidence 3579999997 888999999999977 7899999999999988 445777899999874
Q ss_pred eEeEEee--CcEEEEEEecCCCC
Q psy5221 397 VVAAFFD--QGILNIDLIREVPE 417 (436)
Q Consensus 397 ~~~A~~~--~GvL~i~~pk~~~~ 417 (436)
..+|+|+ +|.++|++||..+.
T Consensus 76 ~~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 76 RSTAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp TCEEEEETTTTEEEEEEEESSTT
T ss_pred CcceEEeCCCcEEEEEEcCCcCC
Confidence 4778886 89999999996443
No 20
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.91 E-value=1.7e-05 Score=65.11 Aligned_cols=75 Identities=16% Similarity=0.284 Sum_probs=64.8
Q ss_pred CCceeEEEecCceEEEEEecCCCC--CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCcc-c--eE
Q psy5221 324 YPPYNIELVDENKYRITMAIAGFN--RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHV-H--VV 398 (436)
Q Consensus 324 ~p~~~i~~e~~~~~~v~~~lpG~~--~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v-~--~~ 398 (436)
.|.+.+.+ +++.++|.+.+|..+ .+++++.++++.+... .-.|.-++.||..| + ..
T Consensus 3 TP~F~itQ-d~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~------------------~~PYyLRL~LP~~V~e~~~~ 63 (134)
T 2k8q_A 3 TPRFSITQ-DEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH------------------LSPYYLRLRFPHELIDDERS 63 (134)
T ss_dssp CSEEEEEE-CSSEEEEEEECCSSCCCSSSCCCEECSSSEEEC------------------SSSSCEEECCSSCEECCSSC
T ss_pred CceEEEEE-CCCEEEEEEEcCccccCccccEEEEeCCEEEEe------------------cCCeEEEecCCCeeecCCCc
Confidence 58899997 889999999999999 8999999999999888 44566779999988 5 38
Q ss_pred eEEee--CcEEEEEEecCCCC
Q psy5221 399 AAFFD--QGILNIDLIREVPE 417 (436)
Q Consensus 399 ~A~~~--~GvL~i~~pk~~~~ 417 (436)
+|+|+ +|.|+|++||..+.
T Consensus 64 kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 64 TAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp EEEEETTTTEEEEEEEESSTT
T ss_pred ceeEeccCCEEEEEEeCCCCC
Confidence 88886 89999999996554
No 21
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.67 E-value=0.017 Score=47.70 Aligned_cols=87 Identities=8% Similarity=0.111 Sum_probs=64.2
Q ss_pred CCCceeEEEec-CceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeee---eEEEEEECCCccce-
Q psy5221 323 SYPPYNIELVD-ENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATR---NFEHRFQLADHVHV- 397 (436)
Q Consensus 323 ~~p~~~i~~e~-~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~---~f~r~~~lP~~v~~- 397 (436)
..+.++.++ + ++.+.|.+.++++.+++++|++.++.|.++........ +..-...| .|.-.+.|-..|+.
T Consensus 18 ~~~r~~W~Q-t~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~----l~~~~a~g~~~~y~~~~~L~~~I~pe 92 (134)
T 1wh0_A 18 AFVKNDSYE-KGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNF----LRLHPGCGPHTTFRWQVKLRNLIEPE 92 (134)
T ss_dssp SCCCEEEEE-ETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHH----HHHSTTCCTTSCEEEEEEBSSCEEEE
T ss_pred cCCCeEEEc-CCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcc----cccccccCcceeEEEeccccccCCch
Confidence 357899997 8 99999999999999999999999999999865321100 00000011 46666788888884
Q ss_pred -EeEEeeCcEEEEEEecC
Q psy5221 398 -VAAFFDQGILNIDLIRE 414 (436)
Q Consensus 398 -~~A~~~~GvL~i~~pk~ 414 (436)
.+.+..++.+.|+|.|.
T Consensus 93 ~S~~~v~~~kIeI~L~K~ 110 (134)
T 1wh0_A 93 QCTFCFTASRIDICLRKR 110 (134)
T ss_dssp EEEEEECSSEEEEEEEES
T ss_pred hCEEEEeCCEEEEEEEEC
Confidence 66667789999999995
No 22
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=96.64 E-value=0.01 Score=56.06 Aligned_cols=70 Identities=11% Similarity=0.022 Sum_probs=45.6
Q ss_pred cchhHHHHHHHHHHHhcCCCC-----------C---eEEEECC-CccEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHH
Q psy5221 59 FTEDWLLKTVNKISKNANIST-----------P---EVAIYNG-EINAFATGAFKNSSLIAISANLLESMTKLEIKAIIA 123 (436)
Q Consensus 59 ~~~~~L~~~l~~l~~~~g~~~-----------p---~v~v~~~-~~NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLA 123 (436)
+....+++.+++++++.+... - .|...+- ...++.. +.+++|+++.. ++.+...+.+|
T Consensus 29 ~~~~~Ik~~V~~L~~~~~t~~~PiD~~~Iae~lGI~~V~~~~L~~~~G~~~---~~~~~I~LN~~----~~~~rqrFTLA 101 (301)
T 3dte_A 29 TALAAAKARMRELAASYGAGLPGRDTHSLMHGLDGITLTFMPMGQRDGAYD---PEHHVILINSQ----VRPERQRFTLA 101 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSSSCHHHHHHTCSSCEEEEECCTTCCEEEE---TTTTEEEEETT----SCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcCHHHHHHHCCCcEEEEEcCCCCCEEEE---CCCcEEEEcCC----CChhhHHHHHH
Confidence 334447777777777665542 0 2233332 3334433 45678888873 58999999999
Q ss_pred HHHHhhhcChHH
Q psy5221 124 HEISHISNGDMV 135 (436)
Q Consensus 124 HElgHi~~~h~~ 135 (436)
||+||+..+|..
T Consensus 102 HELGHllLh~~~ 113 (301)
T 3dte_A 102 HEISHALLLGDD 113 (301)
T ss_dssp HHHHHHHHHHCH
T ss_pred HHHHHHHhcccc
Confidence 999999887743
No 23
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.37 E-value=0.038 Score=45.18 Aligned_cols=78 Identities=9% Similarity=0.199 Sum_probs=61.5
Q ss_pred CCceeEEEecCceEEEEEecCCC---CCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEE-CCCccce--
Q psy5221 324 YPPYNIELVDENKYRITMAIAGF---NRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQ-LADHVHV-- 397 (436)
Q Consensus 324 ~p~~~i~~e~~~~~~v~~~lpG~---~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~-lP~~v~~-- 397 (436)
.+.++.++ +++.+.|.+.+||+ +++++.|+++++.|.|+.... ++. .|.-.+. |-..|+.
T Consensus 20 ~~~y~W~Q-t~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~---~~~----------~y~~~~~~L~~~I~~e~ 85 (127)
T 1x5m_A 20 ISNYGWDQ-SDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL---NGK----------SYSMIVNNLLKPISVEG 85 (127)
T ss_dssp CCSCEEEE-ETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSC---SSS----------CEEEEEECBSSCCCTTT
T ss_pred ccEEEEEc-CCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcC---CCC----------cEEEEhHHhcCccCccc
Confidence 46788897 88999999999999 899999999999999986421 111 3445564 7788883
Q ss_pred EeEEeeCcEEEEEEecCC
Q psy5221 398 VAAFFDQGILNIDLIREV 415 (436)
Q Consensus 398 ~~A~~~~GvL~i~~pk~~ 415 (436)
.+....++.+.|+|.|..
T Consensus 86 S~~~v~~~kVei~L~K~~ 103 (127)
T 1x5m_A 86 SSKKVKTDTVLILCRKKV 103 (127)
T ss_dssp CEEEEETTEEEEEEECSS
T ss_pred CEEEEeCCEEEEEEEECC
Confidence 677778899999999953
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.23 E-value=0.041 Score=45.25 Aligned_cols=74 Identities=12% Similarity=0.217 Sum_probs=56.4
Q ss_pred CCCceeEEEecCceEEEEEecC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccce--Ee
Q psy5221 323 SYPPYNIELVDENKYRITMAIA-GFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHV--VA 399 (436)
Q Consensus 323 ~~p~~~i~~e~~~~~~v~~~lp-G~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~--~~ 399 (436)
..|.+..++ +.+.+.|.+.|| |++++|++|.+..+.|.|+.+ + . . .-...|...|+. .+
T Consensus 3 ~~~~y~W~Q-t~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~-----g-~----------~-~~~~~L~~~I~~e~S~ 64 (131)
T 2o30_A 3 SEAKYTWDQ-ELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ-----G-E----------I-VIDGELLHEVDVSSLW 64 (131)
T ss_dssp --CCCEEEE-ETTEEEEEEECC---CCSCEEEEEETTEEEEEET-----T-E----------E-EEEEEBSSCEEEEEEE
T ss_pred CCCcEEEEe-cCCEEEEEEECCCCCCccceEEEEECCEEEEEEC-----C-E----------e-eEccccccccccccCE
Confidence 357899997 889999999996 999999999999999999852 1 0 0 123467777774 77
Q ss_pred EEeeCcEEEEEEecC
Q psy5221 400 AFFDQGILNIDLIRE 414 (436)
Q Consensus 400 A~~~~GvL~i~~pk~ 414 (436)
...++|-|.|+|.|.
T Consensus 65 w~i~~~kv~i~L~K~ 79 (131)
T 2o30_A 65 WVINGDVVDVNVTKK 79 (131)
T ss_dssp EEEETTEEEEEEEES
T ss_pred EEEeCCEEEEEEEEC
Confidence 788899999999995
No 25
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.11 E-value=0.042 Score=44.70 Aligned_cols=79 Identities=8% Similarity=0.156 Sum_probs=60.8
Q ss_pred CCCCceeEEEecCceEEEEEecC-CC-CCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccce--
Q psy5221 322 QSYPPYNIELVDENKYRITMAIA-GF-NRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHV-- 397 (436)
Q Consensus 322 ~~~p~~~i~~e~~~~~~v~~~lp-G~-~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~-- 397 (436)
...|.+..++ +.+.+.|.+.|| |+ +++|++|++..+.|.|+.+.. .+.. +.-...|...|+.
T Consensus 17 ~~~~~y~W~Q-t~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~---~~~~----------~~~~~~L~~~I~~e~ 82 (124)
T 1wgv_A 17 AVRENYTWSQ-DYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEE---NGER----------VLMEGKLTHKINTES 82 (124)
T ss_dssp BCCSSCEEEE-ETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECS---SSEE----------EEEEEEBSSCBCTTT
T ss_pred CcCCcEEEEE-cccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEcc---CCCc----------eEEcccccCcCCCcC
Confidence 4568999997 889999999999 88 899999999999999986431 1111 1233567777773
Q ss_pred EeEEeeCcE-EEEEEecC
Q psy5221 398 VAAFFDQGI-LNIDLIRE 414 (436)
Q Consensus 398 ~~A~~~~Gv-L~i~~pk~ 414 (436)
.+...+++- |.|+|.|.
T Consensus 83 S~w~i~~~k~v~i~L~K~ 100 (124)
T 1wgv_A 83 SLWSLEPGKCVLVNLSKV 100 (124)
T ss_dssp CEEEECTTSEEEEEECBS
T ss_pred CEEEEeCCCEEEEEEEEC
Confidence 777888885 99999995
No 26
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.00 E-value=0.062 Score=43.73 Aligned_cols=76 Identities=11% Similarity=0.048 Sum_probs=60.3
Q ss_pred C-ceeEEEecCceEEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccce--EeEE
Q psy5221 325 P-PYNIELVDENKYRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHV--VAAF 401 (436)
Q Consensus 325 p-~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~--~~A~ 401 (436)
| .++-++ +.+.+.|.+.+|+. ++++|+++.+.|.+++..... + ..|.-.+.|-..|+. .+.+
T Consensus 3 P~~~~W~Q-t~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~--~----------~~y~~~l~L~~~I~~e~S~~~ 67 (125)
T 1ejf_A 3 PASAKWYD-RRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD--N----------FKHLNEIDLFHCIDPNDSKHK 67 (125)
T ss_dssp CCCEEEEE-CSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT--T----------EEEEEEEEBSSCEEEEEEEEE
T ss_pred CCceeEEe-CCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCC--C----------ceEEEEEEccceeccccCEEE
Confidence 5 699997 89999999999996 799999999999999764211 1 135566788888884 6666
Q ss_pred eeCcEEEEEEecCC
Q psy5221 402 FDQGILNIDLIREV 415 (436)
Q Consensus 402 ~~~GvL~i~~pk~~ 415 (436)
..+..+.|+|.|..
T Consensus 68 v~~~kiei~L~K~~ 81 (125)
T 1ejf_A 68 RTDRSILCCLRKGE 81 (125)
T ss_dssp ECSSCEEEEEEESS
T ss_pred ECCCEEEEEEEECC
Confidence 67889999999953
No 27
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=95.49 E-value=0.18 Score=41.22 Aligned_cols=78 Identities=15% Similarity=0.251 Sum_probs=59.4
Q ss_pred CCCCCceeEEEecCceEEEEEecC-C--CCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc-
Q psy5221 321 QQSYPPYNIELVDENKYRITMAIA-G--FNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH- 396 (436)
Q Consensus 321 ~~~~p~~~i~~e~~~~~~v~~~lp-G--~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~- 396 (436)
+...|.+..++ +.+.+.|.+.+| | ++++|++|++..+.|.|+.+- + .++ + ...|...|+
T Consensus 4 g~~~~~y~W~Q-t~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg-----~-~~~--------~--~~~L~~~I~~ 66 (131)
T 1wfi_A 4 GSSGPNYRWTQ-TLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKG-----Q-PPV--------V--DGELYNEVKV 66 (131)
T ss_dssp SSSCCSSEEEE-CSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETT-----S-CCS--------B--CSCBSSCBCS
T ss_pred CCCCCcEEEEe-cCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECC-----c-eEE--------E--eccccccccc
Confidence 34578999997 899999999999 6 899999999999999998531 1 010 1 124556666
Q ss_pred -eEeEEeeCc-EEEEEEecCC
Q psy5221 397 -VVAAFFDQG-ILNIDLIREV 415 (436)
Q Consensus 397 -~~~A~~~~G-vL~i~~pk~~ 415 (436)
..+...++| .|.|+|.|..
T Consensus 67 e~s~w~i~~~k~v~i~L~K~~ 87 (131)
T 1wfi_A 67 EESSWLIEDGKVVTVHLEKIN 87 (131)
T ss_dssp TTCEEEEETTTEEEEEEEBSS
T ss_pred ccCEEEEcCCCEEEEEEEECC
Confidence 377788888 8999999953
No 28
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=95.27 E-value=0.091 Score=42.48 Aligned_cols=76 Identities=13% Similarity=0.250 Sum_probs=58.9
Q ss_pred CCCCceeEEEecCceEEEEEecCC---CCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--
Q psy5221 322 QSYPPYNIELVDENKYRITMAIAG---FNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH-- 396 (436)
Q Consensus 322 ~~~p~~~i~~e~~~~~~v~~~lpG---~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~-- 396 (436)
...|.+..++ +.+.+.|.+.+|. ++++|++|++..+.|.|..+- ..+ -| .-.|...|+
T Consensus 14 ~~~~~y~W~Q-t~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg------~~~--------~~--~g~L~~~I~~d 76 (121)
T 3qor_A 14 ADLPNYRWTQ-TLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG------QPA--------II--DGELYNEVKVE 76 (121)
T ss_dssp CBCSSCEEEE-CSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT------SCC--------SE--EEEBSSCBCGG
T ss_pred CcCCCEEEEE-ccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC------cce--------EE--ecccccccccc
Confidence 4578899997 8999999999994 789999999999999886421 011 12 245667777
Q ss_pred eEeEEeeCc-EEEEEEecC
Q psy5221 397 VVAAFFDQG-ILNIDLIRE 414 (436)
Q Consensus 397 ~~~A~~~~G-vL~i~~pk~ 414 (436)
.....+++| .|.|+|.|.
T Consensus 77 eS~w~i~~~~~i~i~L~K~ 95 (121)
T 3qor_A 77 ESSWLIADGAVVTVHLEKI 95 (121)
T ss_dssp GCEEEEETTTEEEEEEEBS
T ss_pred ccEEEEcCCCEEEEEEEEC
Confidence 377888888 999999995
No 29
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=95.12 E-value=0.13 Score=43.53 Aligned_cols=74 Identities=12% Similarity=0.052 Sum_probs=58.6
Q ss_pred CCCceeEEEecCceEEEEEecC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc--eEe
Q psy5221 323 SYPPYNIELVDENKYRITMAIA-GFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH--VVA 399 (436)
Q Consensus 323 ~~p~~~i~~e~~~~~~v~~~lp-G~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~--~~~ 399 (436)
..|.+..++ +.+.+.|.+.|| |++++|++|++..+.|.|+.+. .. .-...|...|+ ..+
T Consensus 12 ~~~~y~W~Q-t~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg------~~-----------~l~g~L~~~I~~eeS~ 73 (157)
T 2rh0_A 12 GTPWGQWYQ-TLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG------RE-----------ILKGKLFDSTIADEGT 73 (157)
T ss_dssp ECSSEEEEE-CSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT------EE-----------EEEEEBSSCBCGGGCE
T ss_pred CCCcEEEEe-cCCEEEEEEECCCCCcccceEEEEecCEEEEEECC------EE-----------EEeeccccccCccccE
Confidence 468899997 899999999998 8999999999999999998531 00 12346777777 377
Q ss_pred EEeeCcE-EEEEEecC
Q psy5221 400 AFFDQGI-LNIDLIRE 414 (436)
Q Consensus 400 A~~~~Gv-L~i~~pk~ 414 (436)
.+.+++- |.|+|-|.
T Consensus 74 w~i~~~k~v~I~L~K~ 89 (157)
T 2rh0_A 74 WTLEDRKMVRIVLTKT 89 (157)
T ss_dssp EEEECCCEEEEEEEBS
T ss_pred EEEcCCcEEEEEEEEc
Confidence 7888875 99999995
No 30
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=93.81 E-value=0.25 Score=41.52 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=57.7
Q ss_pred CCceeEEEecCceEEEEEecCCCCCCceEEEEE-CCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccce-EeEE
Q psy5221 324 YPPYNIELVDENKYRITMAIAGFNRSDLEIETE-RDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHV-VAAF 401 (436)
Q Consensus 324 ~p~~~i~~e~~~~~~v~~~lpG~~~edi~v~~~-~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~-~~A~ 401 (436)
.|.++.++ +++.+.|.+.+|++ ++++|+++ ++.|.+++. . . ++ ..|.-.+.|=..|+. .+.+
T Consensus 4 ~P~~~W~Q-t~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~-~-~~----------~~y~~~l~L~~~IdpeS~~~ 67 (150)
T 2kmw_A 4 NPEVLWAQ-RSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-G-A-QG----------ERFEFSLELYGKIMTEYRKN 67 (150)
T ss_dssp CCCEEEEE-CSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-T-T-TT----------EEEEEEEEBSSCEEEEEEEE
T ss_pred CCcEEEEe-CCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-c-C-CC----------ceEEEEeEhhhcccccceEE
Confidence 48899997 89999999999998 58999999 789999986 1 1 11 135556677777775 4444
Q ss_pred eeCcEEEEEEecCC
Q psy5221 402 FDQGILNIDLIREV 415 (436)
Q Consensus 402 ~~~GvL~i~~pk~~ 415 (436)
.....+.|+|.|..
T Consensus 68 v~~~kIei~L~K~e 81 (150)
T 2kmw_A 68 VGLRNIIFSIQKEE 81 (150)
T ss_dssp EESSSEEEEEEECC
T ss_pred ecCCEEEEEEEECC
Confidence 55788999999853
No 31
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=93.33 E-value=0.038 Score=45.62 Aligned_cols=82 Identities=11% Similarity=0.182 Sum_probs=54.7
Q ss_pred CCceeEEEecCce-------EEEEEecCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccc
Q psy5221 324 YPPYNIELVDENK-------YRITMAIAGFNRSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVH 396 (436)
Q Consensus 324 ~p~~~i~~e~~~~-------~~v~~~lpG~~~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~ 396 (436)
.|.++.++ +.+. +.|.+.+|+++ +++|.++.+.|.+++......+.. ....|.-.+.|...|+
T Consensus 6 ~p~~~W~Q-~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~g~~-------~~~~y~~~l~L~~~Id 75 (134)
T 2cg9_X 6 NPQVAWAQ-RSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHVGDE-------NVHHYQLHIDLYKEII 75 (134)
T ss_dssp -----CBC-CCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC--------------CEEBCEEEECSSCCC
T ss_pred CCCEEEEe-CCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEecccccCCc-------cCceEEEEEEChhhcc
Confidence 46677775 6555 99999999984 889999999999987653210000 0013556688999998
Q ss_pred e--EeEEeeCcE-EEEEEecCC
Q psy5221 397 V--VAAFFDQGI-LNIDLIREV 415 (436)
Q Consensus 397 ~--~~A~~~~Gv-L~i~~pk~~ 415 (436)
. .+..+.++. +.|+|.|..
T Consensus 76 pe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 76 PEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp SSSEEEEECCC--CEEEEEECS
T ss_pred ccccEEEECCCEEEEEEEEECC
Confidence 4 788888898 999999954
No 32
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=76.57 E-value=1 Score=39.45 Aligned_cols=17 Identities=24% Similarity=0.335 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
....+.++|||+||.-.
T Consensus 130 ~~~~a~~~AHElGH~lG 146 (197)
T 1bud_A 130 NRLVAITLAHEMAHNLG 146 (197)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHhhhcC
Confidence 34678999999999875
No 33
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=74.97 E-value=1.1 Score=39.28 Aligned_cols=17 Identities=29% Similarity=0.493 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
....+.++|||+||.-.
T Consensus 132 ~~~~a~~~AHElGH~lG 148 (202)
T 1yp1_A 132 PLLMAVVMAHELGHNLG 148 (202)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHhcC
Confidence 44678999999999875
No 34
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=73.36 E-value=4.4 Score=32.02 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=26.6
Q ss_pred ccEEEEcHHHHhhc-CHHHH----HHHHHHHHHhhhcChH
Q psy5221 100 SSLIAISANLLESM-TKLEI----KAIIAHEISHISNGDM 134 (436)
Q Consensus 100 ~~~v~it~gLl~~l-~~~El----~aVLAHElgHi~~~h~ 134 (436)
.+++++-..+...+ +.+|+ .-|+-||+||+-..+-
T Consensus 67 ~rI~lYR~Pi~~~~~~~~el~~~V~~vvvhEiahh~G~~~ 106 (114)
T 3e11_A 67 DRIIIYRNTICALCETESEVIDEVRKTVVHEIAHHFGIDD 106 (114)
T ss_dssp EEEEEEHHHHHHTCSSHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred CEEEEehHHHHHHhCChhHHHHHHHHHHHHHHHHHcCCCH
Confidence 67777778788777 66555 4689999999887664
No 35
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=71.27 E-value=1.6 Score=38.26 Aligned_cols=17 Identities=29% Similarity=0.434 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
.-..+.++|||+||.-.
T Consensus 133 ~~~~a~~~AHElGHnlG 149 (202)
T 1atl_A 133 NLLMGVTMAHELGHNLG 149 (202)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred ceeeEEEehhhhccccC
Confidence 44578899999999864
No 36
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=71.02 E-value=1.7 Score=38.18 Aligned_cols=17 Identities=29% Similarity=0.431 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
.-..+.++|||+||.-.
T Consensus 133 ~~~~a~~~AHElGH~lG 149 (202)
T 2w15_A 133 NLWVAVTMAHELGHNLG 149 (202)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHhhhcC
Confidence 34678999999999865
No 37
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=71.00 E-value=1.7 Score=39.63 Aligned_cols=18 Identities=22% Similarity=0.289 Sum_probs=14.5
Q ss_pred CHHHHHHHHHHHHHhhhc
Q psy5221 114 TKLEIKAIIAHEISHISN 131 (436)
Q Consensus 114 ~~~El~aVLAHElgHi~~ 131 (436)
...+...++||||||--.
T Consensus 178 ~~~~~a~~~AHElGHnlG 195 (257)
T 2ddf_A 178 LTKEADLVTTHELGHNFG 195 (257)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred ccceeeeeeeeehhhhcC
Confidence 445688999999999864
No 38
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
Probab=70.52 E-value=5.3 Score=41.20 Aligned_cols=66 Identities=15% Similarity=0.095 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHhcCCCC--CeEE-----EEC----C-CccEEEeCC-CCCccEEEEcHHHHhhcCHHHHHHHHHHHHHh
Q psy5221 62 DWLLKTVNKISKNANIST--PEVA-----IYN----G-EINAFATGA-FKNSSLIAISANLLESMTKLEIKAIIAHEISH 128 (436)
Q Consensus 62 ~~L~~~l~~l~~~~g~~~--p~v~-----v~~----~-~~NA~~~G~-~~~~~~v~it~gLl~~l~~~El~aVLAHElgH 128 (436)
+.+.+..+++...+|++. +.++ .-+ + ..-+++.++ ++....|..++ ..+.+++. .+.||+||
T Consensus 277 ~~m~~~~~~~f~~lg~~~~~~~~w~~d~~~rpgk~r~~~chp~~~~~~~~~d~rI~~~t----~~~~~d~~-tl~HE~GH 351 (589)
T 1uze_A 277 RRMFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCT----TVNLEDLV-VAHHEMGH 351 (589)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHHHHHHCBCSCCCSSCCCCCSCEEEECSSSSCEEEECCC----CSSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCcCchhHHHhhcccCCCCCCCCccccchhccCCCCCceEEecC----CCCHHHHH-HHHHHHHH
Confidence 568888888889999861 1111 111 1 356777777 34444444453 35777777 89999999
Q ss_pred hhcC
Q psy5221 129 ISNG 132 (436)
Q Consensus 129 i~~~ 132 (436)
..+.
T Consensus 352 a~y~ 355 (589)
T 1uze_A 352 IQYF 355 (589)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9873
No 39
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=69.43 E-value=1.7 Score=38.29 Aligned_cols=17 Identities=24% Similarity=0.430 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
-..++.++|||+||.-.
T Consensus 130 ~~~~a~~~AHElGH~lG 146 (208)
T 4dd8_A 130 PVGVACTMAHEMGHNLG 146 (208)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHcC
Confidence 34567899999999755
No 40
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=69.16 E-value=1.9 Score=37.83 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
.-..+.++|||+||.-.
T Consensus 135 ~~~~a~~~AHElGH~lG 151 (203)
T 1kuf_A 135 VFMVAVTMTHELGHNLG 151 (203)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred chhhHHHHHHHhhhhcC
Confidence 34688999999999864
No 41
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=68.10 E-value=2.1 Score=37.35 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
.-..+.++|||+||.-.
T Consensus 132 ~~~~a~~~AHElGH~lG 148 (197)
T 1qua_A 132 PLLMAVTMAHELGHNLG 148 (197)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHhcC
Confidence 34578999999999874
No 42
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=67.33 E-value=2.1 Score=38.00 Aligned_cols=15 Identities=33% Similarity=0.510 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
..+.++|||+||.-.
T Consensus 140 ~~a~~~AHElGHnlG 154 (217)
T 3b8z_A 140 HAAFTVAHEIGHLLG 154 (217)
T ss_dssp SHHHHHHHHHHHHTT
T ss_pred chhhhhHhhhhhhcC
Confidence 467899999999875
No 43
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=65.22 E-value=2.5 Score=35.56 Aligned_cols=15 Identities=20% Similarity=0.352 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 110 ~~~~va~HEiGHaLG 124 (159)
T 2ovx_A 110 SLFLVAAHQFGHALG 124 (159)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred chhhhhhhhhhhhhc
Confidence 478999999999866
No 44
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} SCOP: d.92.1.0
Probab=64.83 E-value=3.6 Score=43.19 Aligned_cols=56 Identities=16% Similarity=0.248 Sum_probs=37.0
Q ss_pred HhcCCCCCe-EEEECC-CccEEEeCCCCCccEEEEcHHHHhh----------cCHHHHHHHHHHHHHhhhc
Q psy5221 73 KNANISTPE-VAIYNG-EINAFATGAFKNSSLIAISANLLES----------MTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 73 ~~~g~~~p~-v~v~~~-~~NA~~~G~~~~~~~v~it~gLl~~----------l~~~El~aVLAHElgHi~~ 131 (436)
++++-|+++ -+.+.. .+|||-. +....|++-.|+|+- ++=.-+-+||||||+|---
T Consensus 447 ~~l~~p~d~~~w~~~p~~vnAyY~---p~~N~I~fPa~iLq~Pff~~~~p~a~nyg~iG~vigHEi~H~FD 514 (670)
T 3dwb_A 447 DQLRKAPNRDQWSMTPPMVNAYYS---PTKNEIVFPAGILQAPFYTRSSPKALNFGGIGVVVGHELTHAFD 514 (670)
T ss_dssp TTTTSCCCTTCCSSCTTCSCCEEE---TTTTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHHHHTTS
T ss_pred HHhCCCCChhhcCCCcceeEEEec---cccccccccHHHcCCCCCCCchHHHHHHHHHHHHHHHHHhhccC
Confidence 345555432 222233 8999877 456678888888864 2234688999999999743
No 45
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=63.43 E-value=3.7 Score=32.01 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=23.1
Q ss_pred EeEEeeCcEEEEEEecCCCCCCCCeEeeecCCCCCCCC
Q psy5221 398 VAAFFDQGILNIDLIREVPEALKPRKIYINTTKNTDRI 435 (436)
Q Consensus 398 ~~A~~~~GvL~i~~pk~~~~~~~~~~I~I~~~~~~~~~ 435 (436)
+.+.+.+|||+|+++. ..+|-|+..++.+||
T Consensus 30 ~D~e~~~gVLti~f~~-------~~~~VINkQ~P~~QI 60 (106)
T 1ew4_A 30 IDCEINGGVLTITFEN-------GSKIIINRQEPLHQV 60 (106)
T ss_dssp CEEEEETTEEEEECTT-------SCEEEEEEETTTTEE
T ss_pred EeeeccCCEEEEEECC-------CCEEEEeCCchhhhh
Confidence 7888899999999975 246667766665553
No 46
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=63.38 E-value=2.8 Score=35.12 Aligned_cols=15 Identities=27% Similarity=0.450 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|+.||+||...
T Consensus 107 ~~~~v~~HEiGHaLG 121 (160)
T 2jsd_A 107 NLFTVAAHEFGHALG 121 (160)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhHhhhc
Confidence 478999999999865
No 47
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=63.30 E-value=11 Score=32.11 Aligned_cols=45 Identities=9% Similarity=0.271 Sum_probs=33.8
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEeeCcEEEEEEec
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFFDQGILNIDLIR 413 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~~~GvL~i~~pk 413 (436)
|+.++|+++++.++|+|.+ |+.++.| |..++ ...+||.|.|+-|.
T Consensus 11 P~gV~V~i~~~~VtVkGpk----------------G~L~~~~--~~~v~---i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPK----------------GELTRTF--HPDMT---ITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEETTEEEEEETT----------------EEEEEEC--CTTCE---EEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCC----------------eEEEEEc--CCCEE---EEEeCCEEEEEcCC
Confidence 5889999999999999874 5666655 54443 34589988887665
No 48
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=63.17 E-value=2.7 Score=39.31 Aligned_cols=15 Identities=33% Similarity=0.496 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
..+.++||||||.-.
T Consensus 142 ~~a~t~AHElGHnlG 156 (300)
T 2v4b_A 142 QAAFTTAHELGHVFN 156 (300)
T ss_dssp THHHHHHHHHHHHTT
T ss_pred cceehhhhhhhhhcC
Confidence 478999999999864
No 49
>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, Na open conformation, chloride ION binding site; HET: NAG; 2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 3sci_A 3scj_A 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A* 3sck_A 3scl_A
Probab=63.03 E-value=6.3 Score=40.83 Aligned_cols=66 Identities=15% Similarity=0.088 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHHHhcCCCC-C-eEE-----EEC----C-CccEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHHHHHHh
Q psy5221 61 EDWLLKTVNKISKNANIST-P-EVA-----IYN----G-EINAFATGAFKNSSLIAISANLLESMTKLEIKAIIAHEISH 128 (436)
Q Consensus 61 ~~~L~~~l~~l~~~~g~~~-p-~v~-----v~~----~-~~NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLAHElgH 128 (436)
.+.+.+..++..+.+|++. | ..+ --+ + ..-+++.++++....|..++ ..+.+++. ++.||+||
T Consensus 304 ~~~m~~~~~~~f~~lg~~~~~~~~w~~dl~~rpgk~r~~~ch~~~~~~~~~d~rI~~~t----~~~~~d~~-t~~HE~GH 378 (615)
T 1r42_A 304 AQRIFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKGDFRILMCT----KVTMDDFL-TAHHEMGH 378 (615)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCTTHHHHCBCSCCCTTCCCCCSCEEEEEETTEEEEECCC----CSSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCccccchhHhhhccccCCCCCCCCeeccchhhcCCCCceEEecC----CCCHHHHH-HHHHHHHH
Confidence 4456888888888999873 1 111 101 1 34666666655344443353 36788888 59999999
Q ss_pred hhc
Q psy5221 129 ISN 131 (436)
Q Consensus 129 i~~ 131 (436)
..+
T Consensus 379 a~y 381 (615)
T 1r42_A 379 IQY 381 (615)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 50
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=62.81 E-value=2.9 Score=35.37 Aligned_cols=15 Identities=33% Similarity=0.663 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|+.||+||...
T Consensus 114 ~~~~v~~HEiGHaLG 128 (167)
T 2xs4_A 114 DLITVAAHEIGHLLG 128 (167)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred chhhhHHHHHHHhhc
Confidence 578999999999866
No 51
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis}
Probab=62.78 E-value=4.1 Score=42.92 Aligned_cols=58 Identities=21% Similarity=0.157 Sum_probs=39.0
Q ss_pred HHHhcCCCCCe-EEEECC-CccEEEeCCCCCccEEEEcHHHHhh----------cCHHHHHHHHHHHHHhhhc
Q psy5221 71 ISKNANISTPE-VAIYNG-EINAFATGAFKNSSLIAISANLLES----------MTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 71 l~~~~g~~~p~-v~v~~~-~~NA~~~G~~~~~~~v~it~gLl~~----------l~~~El~aVLAHElgHi~~ 131 (436)
..+++|-|+.+ -+.... .+|||-. |....|++-.|+|+- ++=.-+-+||||||+|---
T Consensus 467 ~l~~l~~pvd~~~W~m~p~~vNAyY~---p~~N~I~fPa~iLq~Pff~~~~p~a~nyG~iG~vIgHEi~HgFD 536 (699)
T 3zuk_A 467 ELAKLFGPVDRDEWFMTPQTVNAYYN---PGMNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEIGHGFD 536 (699)
T ss_dssp HHHGGGSCCCSSCCSSCTTCSCCEEE---GGGTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHHHHTTS
T ss_pred HHHHhCCCCCcccccCCcccceeEEe---cCcCeEEeeHHhcCCCCCCCccchHHHhHHHHHHHHHHHHHHhh
Confidence 33456766543 222333 8899876 456678899888863 2335689999999999753
No 52
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=62.35 E-value=2.7 Score=35.60 Aligned_cols=44 Identities=18% Similarity=0.187 Sum_probs=25.7
Q ss_pred CccEEEeCCC-CCccEEEEcHHHHh----hcCHHHHHHHHHHHHHhhhc
Q psy5221 88 EINAFATGAF-KNSSLIAISANLLE----SMTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 88 ~~NA~~~G~~-~~~~~v~it~gLl~----~l~~~El~aVLAHElgHi~~ 131 (436)
.-.+|+.|.. +..++-+++..-+. .+..+-+..+++||+||.-.
T Consensus 79 ~g~~fvfG~a~~~~~~aVvS~~Rl~~~~~~~~~~r~~k~~~HElGH~lG 127 (163)
T 4axq_A 79 KGMNFVFGEAELGGARAVLSVFRLTTADSELYRERVVKEAVHEIGHVLG 127 (163)
T ss_dssp TTCSCBSEEECTTSSEEEEECGGGCCSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCccceEEeecCCceEEEEecccCCccHHHHHHHHHHHHHHHHHHHcC
Confidence 3345666654 23344444442222 12256788999999999855
No 53
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=61.80 E-value=12 Score=28.82 Aligned_cols=46 Identities=15% Similarity=0.199 Sum_probs=30.6
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEeeCcE---EEEEEec
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFFDQGI---LNIDLIR 413 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~~~Gv---L~i~~pk 413 (436)
|+.++|+++++.++|+|.+ |+-+|.|.- ..+ +...+|+. |.|+-|.
T Consensus 20 P~gV~V~i~~~~VtVKGPk----------------G~L~~~~~h-~~v---~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPR----------------GTLRRDFNH-INV---ELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEEEETTEEEEEETT----------------EEEEEECCS-SCC---EEEEECSSSCEEEEECCS
T ss_pred CCCCEEEEeCCEEEEECCC----------------ceEEEEecc-CcE---EEEEcCCceeEEEEEccC
Confidence 5889999999999999874 455554431 333 33445665 7776555
No 54
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=61.75 E-value=3 Score=39.37 Aligned_cols=15 Identities=27% Similarity=0.428 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
..+.++||||||.-.
T Consensus 142 ~~a~t~AHElGHnlG 156 (316)
T 2rjp_A 142 QSAFTAAHQLGHVFN 156 (316)
T ss_dssp THHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhhcC
Confidence 578999999999875
No 55
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=61.47 E-value=3.3 Score=36.61 Aligned_cols=16 Identities=38% Similarity=0.501 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5221 116 LEIKAIIAHEISHISN 131 (436)
Q Consensus 116 ~El~aVLAHElgHi~~ 131 (436)
-..+.++|||+||.-.
T Consensus 134 ~~~a~~~AHElGHnlG 149 (214)
T 1r55_A 134 IGAAATMAHEIGHSLG 149 (214)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHhcC
Confidence 3568999999999865
No 56
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=61.41 E-value=3.4 Score=38.35 Aligned_cols=18 Identities=22% Similarity=0.289 Sum_probs=14.5
Q ss_pred CHHHHHHHHHHHHHhhhc
Q psy5221 114 TKLEIKAIIAHEISHISN 131 (436)
Q Consensus 114 ~~~El~aVLAHElgHi~~ 131 (436)
...+.+.++||||||.-.
T Consensus 184 ~~~~~a~~~AHElGHnlG 201 (288)
T 2i47_A 184 LTKEADLVTTHELGHNFG 201 (288)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred chhhHHHHHHHHHHhhcC
Confidence 445688999999999864
No 57
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=61.06 E-value=3.3 Score=35.14 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|+.||+||...
T Consensus 110 ~~~~v~~HEiGHaLG 124 (168)
T 1cge_A 110 NLHRVAAHELGHSLG 124 (168)
T ss_dssp BHHHHHHHHHHHHTT
T ss_pred chhhhhhhHhHhhhc
Confidence 378999999999876
No 58
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=60.08 E-value=3.3 Score=40.16 Aligned_cols=15 Identities=33% Similarity=0.510 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
..+.++||||||.-.
T Consensus 142 ~~a~~~AHElGHnlG 156 (378)
T 2rjq_A 142 HAAFTVAHEIGHLLG 156 (378)
T ss_dssp THHHHHHHHHHHHTT
T ss_pred chhhhhhhhhhhhcC
Confidence 478999999999875
No 59
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=59.96 E-value=16 Score=32.08 Aligned_cols=45 Identities=11% Similarity=0.228 Sum_probs=32.6
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEeeCcEEEEEEec
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFFDQGILNIDLIR 413 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~~~GvL~i~~pk 413 (436)
|+.++|+++++.++|+|.+ |+.++.| |..+ +...+||.|.|+-+.
T Consensus 39 P~gV~V~i~~~~VtVKGPk----------------G~L~~~~--~~~v---~i~~e~~~i~v~~~~ 83 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPK----------------GELTVPY--NTEL---TVRQDGDQLLVERPS 83 (212)
T ss_pred CCCcEEEEeCCEEEEECCC----------------EEEEEEC--CCCe---EEEEECCEEEEEcCC
Confidence 5888999999999999874 5566555 4443 334578888887665
No 60
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=59.91 E-value=3.7 Score=34.99 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|+.||+||...
T Consensus 112 ~~~~v~~HEiGHaLG 126 (173)
T 1hy7_A 112 NLFLVAAHEIGHSLG 126 (173)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHhhc
Confidence 478999999999865
No 61
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=59.07 E-value=4.1 Score=33.11 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=21.5
Q ss_pred cEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHHHHHHhhhc
Q psy5221 90 NAFATGAFKNSSLIAISANLLESMTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 90 NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLAHElgHi~~ 131 (436)
-|+..|. ....+.++... -....+..|.+||+||...
T Consensus 54 ~A~~~~~--g~G~~~~d~t~---~~~~~~~~v~aHE~GH~LG 90 (132)
T 1c7k_A 54 YAQTDGH--GRGYIFLDYQQ---NQQYDSTRVTAHETGHVLG 90 (132)
T ss_dssp EEEECSS--SCEEEEEEHHH---HHHSCHHHHHHHHHHHHHT
T ss_pred eecCCCC--CCCCeEecccc---cCCcCCceEEeeeehhccC
Confidence 3554432 23345566422 1223467899999999865
No 62
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A*
Probab=58.26 E-value=6 Score=41.65 Aligned_cols=54 Identities=24% Similarity=0.282 Sum_probs=35.8
Q ss_pred hcCCCCCe-EEEECC-CccEEEeCCCCCccEEEEcHHHHhh----------cCHHHHHHHHHHHHHhhh
Q psy5221 74 NANISTPE-VAIYNG-EINAFATGAFKNSSLIAISANLLES----------MTKLEIKAIIAHEISHIS 130 (436)
Q Consensus 74 ~~g~~~p~-v~v~~~-~~NA~~~G~~~~~~~v~it~gLl~~----------l~~~El~aVLAHElgHi~ 130 (436)
+++-|+.+ -+.... .+|||-. +....|++-.|+|+- ++=.-+-+||||||+|--
T Consensus 471 ~l~~pvd~~~w~~~p~~vNA~Y~---p~~N~I~~Pa~iLq~Pff~~~~~~a~nyg~iG~vigHEi~H~F 536 (696)
T 1r1h_A 471 KLREKVDKDEWISGAAVVNAFYS---SGRNQIVFPAGILQPPFFSAQQSNSLNYGGIGMVIGHEITHGF 536 (696)
T ss_dssp TTTSCCCTTCCSSCSSCSCCEEE---TTTTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHHHGGG
T ss_pred HhCCCCChhhccCCccceeeEEc---CcCCEEEeeHHHhCCcccCccccHHHHhhHHHHHHHHHHHHHh
Confidence 45555432 122223 8899877 445668888888863 233458999999999964
No 63
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=56.88 E-value=8.5 Score=30.76 Aligned_cols=31 Identities=13% Similarity=0.241 Sum_probs=23.9
Q ss_pred EeEEeeCcEEEEEEecCCCCCCCCeEeeecCCCCCCCC
Q psy5221 398 VAAFFDQGILNIDLIREVPEALKPRKIYINTTKNTDRI 435 (436)
Q Consensus 398 ~~A~~~~GvL~i~~pk~~~~~~~~~~I~I~~~~~~~~~ 435 (436)
+.+.+.+|||+|+++. .-+|-|+..++.+||
T Consensus 49 ~Dve~~~gVLti~f~~-------~~~~VINkQ~P~~QI 79 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA-------FGTYVINKQPPNKQI 79 (123)
T ss_dssp CEEEECSSEEEEECTT-------TCCEEEECCCSSSCC
T ss_pred eEEEccCCEEEEEECC-------CCEEEEeCCChhhHH
Confidence 6888899999999975 256777777776664
No 64
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=56.66 E-value=4.5 Score=34.11 Aligned_cols=15 Identities=27% Similarity=0.585 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|+.||+||...
T Consensus 112 ~~~~v~~HEiGHaLG 126 (165)
T 1hv5_A 112 DLLQVAAHEFGHVLG 126 (165)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred hhhhhHHHHhHhhhC
Confidence 478999999999866
No 65
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=56.53 E-value=4.9 Score=39.64 Aligned_cols=18 Identities=22% Similarity=0.285 Sum_probs=14.6
Q ss_pred CHHHHHHHHHHHHHhhhc
Q psy5221 114 TKLEIKAIIAHEISHISN 131 (436)
Q Consensus 114 ~~~El~aVLAHElgHi~~ 131 (436)
+....+.++||||||.-.
T Consensus 142 ~~~~~a~t~AHElGHnlG 159 (427)
T 2ero_A 142 IHHLVAIAMAHEMGHNLG 159 (427)
T ss_dssp SHHHHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHHHhcC
Confidence 345678999999999875
No 66
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=55.60 E-value=5.3 Score=39.41 Aligned_cols=17 Identities=35% Similarity=0.552 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
...++.++||||||.-.
T Consensus 136 ~~~~a~t~AHElGHnlG 152 (427)
T 2e3x_A 136 NFKTAVIMAHELSHNLG 152 (427)
T ss_dssp HHHHHHHHHHHHHHTTT
T ss_pred cceeeeehHHHHHHhhC
Confidence 45678999999999864
No 67
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=54.37 E-value=5.2 Score=33.68 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 111 ~~~~v~~HE~GHalG 125 (163)
T 1i76_A 111 NLFLVAAHEFGHSLG 125 (163)
T ss_dssp BHHHHHHHHHHHHHT
T ss_pred hhhhhhHHHhhhhhc
Confidence 478999999999876
No 68
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=54.12 E-value=5.8 Score=39.01 Aligned_cols=17 Identities=35% Similarity=0.561 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5221 115 KLEIKAIIAHEISHISN 131 (436)
Q Consensus 115 ~~El~aVLAHElgHi~~ 131 (436)
...++.++||||||.-.
T Consensus 134 ~~~~a~t~AHElGHnlG 150 (419)
T 2dw0_A 134 NLVVAVIMAHEMGHNLG 150 (419)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred chhhhhhHHHHHHHHcC
Confidence 45678999999999865
No 69
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=52.75 E-value=35 Score=24.13 Aligned_cols=31 Identities=10% Similarity=0.236 Sum_probs=19.1
Q ss_pred eEeEEeeCcEEEEEEecCCCCCCCCeEeeecCCC
Q psy5221 397 VVAAFFDQGILNIDLIREVPEALKPRKIYINTTK 430 (436)
Q Consensus 397 ~~~A~~~~GvL~i~~pk~~~~~~~~~~I~I~~~~ 430 (436)
.|+|.|+||||+--=|- .-....++.|....
T Consensus 4 ~IeAiYEnGVfkPLe~l---~L~EG~kV~I~I~~ 34 (69)
T 2nwt_A 4 IIEAVYENGVFKPLQKV---DLKEGERVKIKLEL 34 (69)
T ss_dssp CEEEEEETTEEEESSCC---CCCTTEEEEEECCC
T ss_pred eEEEEEECCEEeECCcC---CCCCCCEEEEEEEe
Confidence 48999999999743332 22334556555443
No 70
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=52.71 E-value=5.7 Score=33.59 Aligned_cols=15 Identities=20% Similarity=0.330 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 113 ~~~~~~~HE~gH~lG 127 (167)
T 3ayu_A 113 SLFLVAAHAFGHAMG 127 (167)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred cceeehhhhhHHhcc
Confidence 378999999999865
No 71
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=52.65 E-value=5.1 Score=39.08 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5221 116 LEIKAIIAHEISHISN 131 (436)
Q Consensus 116 ~El~aVLAHElgHi~~ 131 (436)
...+.++||||||.-.
T Consensus 137 ~~~a~t~AHElGHnlG 152 (397)
T 3k7n_A 137 SLVASTITHELGHNLG 152 (397)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred chhhhhHHHHHHHHcC
Confidence 4678899999999754
No 72
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=52.42 E-value=5.9 Score=33.22 Aligned_cols=15 Identities=27% Similarity=0.321 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 107 ~~~~~~~HE~GH~lG 121 (159)
T 1y93_A 107 NLFLTAVHEIGHSLG 121 (159)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred hhhhhhhhhhhhhhc
Confidence 378999999999876
No 73
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=51.84 E-value=5.6 Score=36.27 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 194 ~l~~va~HEiGHaLG 208 (255)
T 1slm_A 194 NLFLVAAHEIGHSLG 208 (255)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred eehhhhHHHHHHHhc
Confidence 478999999999866
No 74
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=51.17 E-value=5.6 Score=39.17 Aligned_cols=16 Identities=25% Similarity=0.335 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5221 116 LEIKAIIAHEISHISN 131 (436)
Q Consensus 116 ~El~aVLAHElgHi~~ 131 (436)
...+.++||||||.-.
T Consensus 142 ~~~a~t~AHElGHnlG 157 (422)
T 3k7l_A 142 RMVAITMAHEMGHNLG 157 (422)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHcC
Confidence 4678899999999754
No 75
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypept carboxypeptidase, hydrolase; 2.10A {Trypanosoma cruzi}
Probab=50.53 E-value=75 Score=31.78 Aligned_cols=63 Identities=11% Similarity=0.078 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhcCCCCCeEEEECCCccEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHHHHHHhhhc
Q psy5221 64 LLKTVNKISKNANISTPEVAIYNGEINAFATGAFKNSSLIAISANLLESMTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~p~v~v~~~~~NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLAHElgHi~~ 131 (436)
=.+...++++.+|++..+-.+-.+ +--|+.|. +.. |-+|+-.-+.--..-|-++ -||.||-..
T Consensus 212 Q~~l~~~~l~~lGfD~~~gRld~S-~HPF~~g~-~~D--vRITTry~e~d~~~~l~s~-iHE~GHAlY 274 (505)
T 3dwc_A 212 QEALCRFFMDVWKFDFDGGRLDVS-AHPFCGNS-KED--VRITTKYTETEFVTSLLGV-IHETGHAKY 274 (505)
T ss_dssp HHHHHHHHHHHTTCCTTSEEEEEC-SSCCEEEE-TTE--EEEEECCBTTBCHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccceecCC-CCCCCCCC-CCC--eEEecccCcccHHHHHHHH-HHHHhHHHH
Confidence 346667889999999776555443 34477876 433 6666622222122344444 499999765
No 76
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=50.38 E-value=6.6 Score=33.48 Aligned_cols=15 Identities=20% Similarity=0.266 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 114 ~~~~~~~HE~gH~lG 128 (174)
T 2y6d_A 114 NFLYAATHELGHSLG 128 (174)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred eeeehhhHHhHhhhc
Confidence 478999999999876
No 77
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=50.13 E-value=33 Score=26.00 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=29.2
Q ss_pred eEEEEEecC-CCCCCceEEEEECCEEEEEEEEecc
Q psy5221 336 KYRITMAIA-GFNRSDLEIETERDTLRITGRKQAD 369 (436)
Q Consensus 336 ~~~v~~~lp-G~~~edi~v~~~~~~l~i~g~~~~~ 369 (436)
.|.=.+.|| +++++.++-+.+++.|+|+-.+.++
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEEEEEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 567788999 5899999999999999999877654
No 78
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=49.95 E-value=18 Score=29.15 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=24.6
Q ss_pred CccEEEEcHHHHhhc-C----HHHHHHHHHHHHHhhh
Q psy5221 99 NSSLIAISANLLESM-T----KLEIKAIIAHEISHIS 130 (436)
Q Consensus 99 ~~~~v~it~gLl~~l-~----~~El~aVLAHElgHi~ 130 (436)
..+++++-..++..+ + .+++.-|+-||+||+-
T Consensus 65 P~~I~lYR~pi~~~~~~~eeL~~~V~~tvvHEiaHhf 101 (130)
T 2ejq_A 65 GRHIALYYGSFLEVAGEGFDWEAEVWETMLHELRHHL 101 (130)
T ss_dssp CCEEEEEHHHHHHHCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEehHHHHHHhCChhhHHHHHHHHHHHHhHHHH
Confidence 467788888888877 4 3567888899999975
No 79
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=49.81 E-value=6.8 Score=33.21 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 112 ~l~~v~~hE~Gh~lG 126 (168)
T 830c_A 112 NLFLVAAHEFGHSLG 126 (168)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred chhhhhhhhhcchhc
Confidence 378999999999876
No 80
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=49.00 E-value=10 Score=30.63 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=20.3
Q ss_pred EeEEeeCcEEEEEEecCCCCCCCCeEeeecCCCCCCC
Q psy5221 398 VAAFFDQGILNIDLIREVPEALKPRKIYINTTKNTDR 434 (436)
Q Consensus 398 ~~A~~~~GvL~i~~pk~~~~~~~~~~I~I~~~~~~~~ 434 (436)
+.+.+.+|||+|+++. ..-+|-|+..++.+|
T Consensus 42 ~D~e~~~gVLti~f~~------~~g~~VINkQ~P~~Q 72 (129)
T 3t3l_A 42 YDVSFGSGVLTVKLGG------DLGTYVINKQTPNKA 72 (129)
T ss_dssp CEEEEETTEEEEECCT------TCCEEEEEEETTTTE
T ss_pred eeeecCCCEEEEEEcC------CCCEEEEeCCchhhH
Confidence 6777889999999962 124455555554444
No 81
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=48.75 E-value=27 Score=29.84 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=33.3
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEeeCcEEEEEEec
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFFDQGILNIDLIR 413 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~~~GvL~i~~pk 413 (436)
|+.++|+++++.++|+|.+ |+.+|.|. |..++ ...+||.|.|+-|.
T Consensus 9 P~gV~v~i~~~~vtVkGpk----------------G~L~~~~~-~~~v~---i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDN----------------GSVTRRLW-YPDID---VSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEETTEEEEEETT----------------EEEEEECC-CTTCE---EEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCC----------------eEEEEEEE-CCeEE---EEEECCEEEEEcCC
Confidence 5889999999999999874 56666553 33433 34579988887665
No 82
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=48.42 E-value=35 Score=36.77 Aligned_cols=68 Identities=19% Similarity=0.192 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhcCCCC--CeEEE--ECCCccEEEeCCCCCccEEEEcHH-HHh---hcC---HHHHHHHHHHHHHhhhcC
Q psy5221 64 LLKTVNKISKNANIST--PEVAI--YNGEINAFATGAFKNSSLIAISAN-LLE---SMT---KLEIKAIIAHEISHISNG 132 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~--p~v~v--~~~~~NA~~~G~~~~~~~v~it~g-Ll~---~l~---~~El~aVLAHElgHi~~~ 132 (436)
+.+.++-..+..|.+. ++.-+ +++ .+..+. .+.+.+.+.+. ++. ..+ ...+..|+|||++|-..|
T Consensus 226 ~~~~l~~~e~~fG~pYP~~k~d~Vavpd-f~~GaM---En~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfG 301 (867)
T 2gtq_A 226 LKNAMKWDETRFGLEYDLDIFMVVAVGD-FNMGAM---ENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTG 301 (867)
T ss_dssp HHHHHHHHHHHHCCCCCSSEEEEEEESS-CSSSEE---CCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHHHhCCCCCCcceeEEEcCC-CCcccc---ccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcC
Confidence 4456666666788763 44333 333 222112 22344544432 321 122 245789999999999999
Q ss_pred hHH
Q psy5221 133 DMV 135 (436)
Q Consensus 133 h~~ 135 (436)
+..
T Consensus 302 nlV 304 (867)
T 2gtq_A 302 NRV 304 (867)
T ss_dssp TTB
T ss_pred cEE
Confidence 853
No 83
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=47.77 E-value=19 Score=31.00 Aligned_cols=45 Identities=20% Similarity=0.317 Sum_probs=31.7
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEeeCcEEEEEEe
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFFDQGILNIDLI 412 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~~~GvL~i~~p 412 (436)
|++++|+++++.++|+|.+ |+-+|.|.-| ++ +-..+++.|.|+.+
T Consensus 14 P~gV~v~i~~~~V~VkGpk----------------G~L~~~~~~~-~v---~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPK----------------GELEREFFWP-GI---QIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSSEEEEECSS----------------CEEEEECCCT-TC---EEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcCC----------------eEEEEEecCC-cE---EEEEeCCEEEEEEC
Confidence 4899999999999999874 5666665422 23 33457888888753
No 84
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=47.23 E-value=31 Score=37.41 Aligned_cols=67 Identities=25% Similarity=0.337 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhcCCC--CCeE--EEECC-CccEEEeCCCCCccEEEEcHH-HH-hh-----cCHHHHHHHHHHHHHhhhc
Q psy5221 64 LLKTVNKISKNANIS--TPEV--AIYNG-EINAFATGAFKNSSLIAISAN-LL-ES-----MTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 64 L~~~l~~l~~~~g~~--~p~v--~v~~~-~~NA~~~G~~~~~~~v~it~g-Ll-~~-----l~~~El~aVLAHElgHi~~ 131 (436)
..+.++-+.+..|+| .++. ..+++ ...| . .+-+.+.++.. ++ +. -+...+..|+|||++|...
T Consensus 241 ~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~Ga--M---En~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWF 315 (897)
T 2xdt_A 241 AVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGA--M---ENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWF 315 (897)
T ss_dssp HHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSE--E---CCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTB
T ss_pred HHHHHHHHHHHhCCCCCccceeEEEeCCCcccc--h---hcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHc
Confidence 345666677778876 3443 33444 2222 2 22344555543 32 11 1235788999999999999
Q ss_pred ChHH
Q psy5221 132 GDMV 135 (436)
Q Consensus 132 ~h~~ 135 (436)
|+..
T Consensus 316 GnlV 319 (897)
T 2xdt_A 316 GNLV 319 (897)
T ss_dssp TTTE
T ss_pred CCEe
Confidence 8853
No 85
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=46.65 E-value=8.1 Score=32.62 Aligned_cols=16 Identities=19% Similarity=0.349 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5221 116 LEIKAIIAHEISHISN 131 (436)
Q Consensus 116 ~El~aVLAHElgHi~~ 131 (436)
..+..|++||+||...
T Consensus 115 ~~~~~~~~he~gh~lg 130 (169)
T 1rm8_A 115 NDLFLVAVHELGHALG 130 (169)
T ss_dssp EEHHHHHHHHHHHHHT
T ss_pred ceeeeehhhhhhhhcC
Confidence 3578999999999876
No 86
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=46.23 E-value=12 Score=38.50 Aligned_cols=32 Identities=34% Similarity=0.545 Sum_probs=23.3
Q ss_pred cEEEEcHHHHhhcCHHHHHHHHHHHHHhhhcChH
Q psy5221 101 SLIAISANLLESMTKLEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 101 ~~v~it~gLl~~l~~~El~aVLAHElgHi~~~h~ 134 (436)
+.++++..++ ..+..+..|+|||++|-.-|+.
T Consensus 272 gl~~~~~~~l--~~~~~~~~viaHElAHqWfGnl 303 (608)
T 3u9w_A 272 CLTFVTPTLL--AGDKSLSNVIAHEISHSWTGNL 303 (608)
T ss_dssp TEEEECGGGC--CSSSTTTHHHHHHHHTTTBTTT
T ss_pred cceeeeeeee--cccchhHHHHHHHhhhhhhcCc
Confidence 4566666443 3455678899999999988875
No 87
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=45.88 E-value=26 Score=29.95 Aligned_cols=44 Identities=11% Similarity=0.356 Sum_probs=32.1
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEeeCcEEEEEEe
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFFDQGILNIDLI 412 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~~~GvL~i~~p 412 (436)
|++++|+++++.++|+|.+ |+-+|.| |..++ -..+|+.|.|+.+
T Consensus 12 P~gV~v~i~~~~v~VkGpk----------------G~L~~~~--~~~v~---i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPK----------------GELEVPV--SPEMR---VVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSS----------------CEEEEEC--CTTSE---EEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCC----------------cEEEEEe--CCCEE---EEEECCEEEEEEC
Confidence 6899999999999999874 5666655 44444 3356888888754
No 88
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=45.00 E-value=8.9 Score=32.92 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 121 ~l~~v~~hE~Gh~lG 135 (181)
T 3ma2_D 121 DIFLVAVHELGHALG 135 (181)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred eeeeeehhhcccccc
Confidence 588899999999866
No 89
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, MUR16; 2.00A {Methanocorpusculum labreanum}
Probab=44.83 E-value=11 Score=33.04 Aligned_cols=44 Identities=23% Similarity=0.224 Sum_probs=27.3
Q ss_pred CccEEEeCCC-CCccEEEEcHHHHhh----------cCHHHHHHHHHHHHHhhhc
Q psy5221 88 EINAFATGAF-KNSSLIAISANLLES----------MTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 88 ~~NA~~~G~~-~~~~~v~it~gLl~~----------l~~~El~aVLAHElgHi~~ 131 (436)
.--+|+.|.. +..++-+++..-++. +..+.+..+++||+||.-.
T Consensus 102 ~g~nFVFG~A~~~~~vaVVS~~Rl~~~fy~~~~~~~l~~~Rv~k~~~HElGH~lG 156 (210)
T 3lmc_A 102 PLADFVFGLAYPKLGVAIVSPHRLQNEFYGKYADDSALIDRIVKEGAHEIGHLFG 156 (210)
T ss_dssp TTEEEESEEEEGGGTEEEECGGGTSGGGGTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcceeEEeECCCCEEEEEeeccCcccccccccHHHHHHHHHHHHHHHHHHhcC
Confidence 3455677764 334444555543321 2356788999999999955
No 90
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=44.70 E-value=42 Score=36.34 Aligned_cols=65 Identities=26% Similarity=0.314 Sum_probs=37.7
Q ss_pred HHHHHHHHHhcCCCC--C--eEEEECC-CccEEEeCCCCCccEEEEcHHHH-h---h---cCHHHHHHHHHHHHHhhhcC
Q psy5221 65 LKTVNKISKNANIST--P--EVAIYNG-EINAFATGAFKNSSLIAISANLL-E---S---MTKLEIKAIIAHEISHISNG 132 (436)
Q Consensus 65 ~~~l~~l~~~~g~~~--p--~v~v~~~-~~NA~~~G~~~~~~~v~it~gLl-~---~---l~~~El~aVLAHElgHi~~~ 132 (436)
.+.++-+.+..|.|. + ++..+++ ...|+ .+-+.|.+....+ - . -....+..|+|||++|..-|
T Consensus 256 ~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaM-----En~glit~~e~~ll~d~~~s~~~~~~~~~~viaHElAHqWFG 330 (909)
T 4fke_A 256 GPILNFFANHYNTSYPLPKSDQIALPDFNAGAM-----ENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFG 330 (909)
T ss_dssp HHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEE-----CCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHhccCCCCCCcccEEEecCCCCccc-----ccCcccccccceeecCcccCChHHHHHHHHHHHHHHHhhhhc
Confidence 345555566677763 3 3445554 33332 1223455554333 1 1 13456789999999999998
Q ss_pred hH
Q psy5221 133 DM 134 (436)
Q Consensus 133 h~ 134 (436)
+.
T Consensus 331 nl 332 (909)
T 4fke_A 331 NL 332 (909)
T ss_dssp TT
T ss_pred Ce
Confidence 86
No 91
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=43.72 E-value=40 Score=36.50 Aligned_cols=67 Identities=21% Similarity=0.246 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhcCCCC--CeE--EEECC-CccEEEeCCCCCccEEEEcHH-HHh---hcC---HHHHHHHHHHHHHhhhc
Q psy5221 64 LLKTVNKISKNANIST--PEV--AIYNG-EINAFATGAFKNSSLIAISAN-LLE---SMT---KLEIKAIIAHEISHISN 131 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~--p~v--~v~~~-~~NA~~~G~~~~~~~v~it~g-Ll~---~l~---~~El~aVLAHElgHi~~ 131 (436)
+.+.++-..+..|.+. ++. ..+++ ...| . .+.+.+++... ++. ..+ ...+..|+|||++|-..
T Consensus 251 ~~~~l~~~e~~fG~pYP~~k~diVavPdf~~Ga--M---En~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWF 325 (891)
T 3b34_A 251 LKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGA--M---ENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWT 325 (891)
T ss_dssp HHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSE--E---CCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTB
T ss_pred HHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCc--c---ccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHh
Confidence 4455666666788763 443 33343 2222 2 22334444443 321 122 24578999999999999
Q ss_pred ChHH
Q psy5221 132 GDMV 135 (436)
Q Consensus 132 ~h~~ 135 (436)
|+..
T Consensus 326 GNlV 329 (891)
T 3b34_A 326 GNRV 329 (891)
T ss_dssp TTTE
T ss_pred CCCC
Confidence 8753
No 92
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=43.41 E-value=39 Score=25.36 Aligned_cols=33 Identities=12% Similarity=0.202 Sum_probs=28.8
Q ss_pred ceEEEEEecCC-CCCCceEEEEECCEEEEEEEEe
Q psy5221 335 NKYRITMAIAG-FNRSDLEIETERDTLRITGRKQ 367 (436)
Q Consensus 335 ~~~~v~~~lpG-~~~edi~v~~~~~~l~i~g~~~ 367 (436)
..|.=.+.||. ++++.|+-+.+++.|+|+-.+.
T Consensus 64 g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 64 GSFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp EEEEEEEECCTTBCTTSCEEEEETTEEEEEEEBC
T ss_pred eEEEEEEECCCCcChHHeEEEEeCCEEEEEEecC
Confidence 46888999996 8999999999999999997654
No 93
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=43.32 E-value=36 Score=37.19 Aligned_cols=65 Identities=26% Similarity=0.321 Sum_probs=37.3
Q ss_pred HHHHHHHHHhcCCC--CCe--EEEECC-CccEEEeCCCCCccEEEEcHHH-H-hh-----cCHHHHHHHHHHHHHhhhcC
Q psy5221 65 LKTVNKISKNANIS--TPE--VAIYNG-EINAFATGAFKNSSLIAISANL-L-ES-----MTKLEIKAIIAHEISHISNG 132 (436)
Q Consensus 65 ~~~l~~l~~~~g~~--~p~--v~v~~~-~~NA~~~G~~~~~~~v~it~gL-l-~~-----l~~~El~aVLAHElgHi~~~ 132 (436)
.+.++-+.+..|+| .|+ +..+++ ...|+ .+-+.|.+.... + +. -+...+..|+|||++|...|
T Consensus 304 ~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaM-----En~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFG 378 (967)
T 3se6_A 304 LKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAM-----ENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFG 378 (967)
T ss_dssp HHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEE-----CCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBT
T ss_pred HHHHHHHHHhcCCCCCcccccEEEecCCCCccc-----ccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhc
Confidence 45566666777866 344 344554 32222 223345555432 2 11 12346789999999999998
Q ss_pred hH
Q psy5221 133 DM 134 (436)
Q Consensus 133 h~ 134 (436)
+.
T Consensus 379 nl 380 (967)
T 3se6_A 379 NL 380 (967)
T ss_dssp TT
T ss_pred Cc
Confidence 85
No 94
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=43.30 E-value=38 Score=36.00 Aligned_cols=68 Identities=26% Similarity=0.234 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhcCCC--CCeEE--EECCCccEEEeCCCCCccEEEEcH-HHHhh--c---CHHHHHHHHHHHHHhhhcCh
Q psy5221 64 LLKTVNKISKNANIS--TPEVA--IYNGEINAFATGAFKNSSLIAISA-NLLES--M---TKLEIKAIIAHEISHISNGD 133 (436)
Q Consensus 64 L~~~l~~l~~~~g~~--~p~v~--v~~~~~NA~~~G~~~~~~~v~it~-gLl~~--l---~~~El~aVLAHElgHi~~~h 133 (436)
..+.++-+.+..|+| .++.- .+++ .++.+. .+-+.|.+.. .++.. - +...+..|+|||++|...|+
T Consensus 199 ~~~~l~~~e~~fg~~YP~~k~d~v~vpd-f~~GaM---En~glit~~e~~ll~~~~~~~~~~~~~~~viaHElaHqWfGn 274 (780)
T 1z5h_A 199 ARKSVEFYENYFGIPYALPKMHLISVPE-FGAGAM---ENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGD 274 (780)
T ss_dssp HHHHHHHHHHHHSSCCSSSEEEEEEETT-CTTCEE---CCTTEEEEEHHHHSCCTTSCHHHHHHHHHHHHHHHHHTTBTT
T ss_pred HHHHHHHHHHHhCCCCCCccCCEEEcCC-CCCCcc---cccCeeEeecceEeecCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356677777788875 34433 3443 222112 2233444443 33322 1 13458899999999999998
Q ss_pred HH
Q psy5221 134 MV 135 (436)
Q Consensus 134 ~~ 135 (436)
..
T Consensus 275 lV 276 (780)
T 1z5h_A 275 LV 276 (780)
T ss_dssp TE
T ss_pred cc
Confidence 53
No 95
>3sks_A Putative oligoendopeptidase F; structural genomics, center for structural genomics of infec diseases, csgid, protease, hydrolase; 2.05A {Bacillus anthracis}
Probab=42.36 E-value=11 Score=38.66 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=27.7
Q ss_pred EEEECC-CccEEEeCCCCC-ccEEEEc-HHHHhhcCHHHHHHHHHHHHHhhhcC
Q psy5221 82 VAIYNG-EINAFATGAFKN-SSLIAIS-ANLLESMTKLEIKAIIAHEISHISNG 132 (436)
Q Consensus 82 v~v~~~-~~NA~~~G~~~~-~~~v~it-~gLl~~l~~~El~aVLAHElgHi~~~ 132 (436)
++--++ ...||+.|+.+. .++|+.+ ++ +-+++ ..|+||+||-.|.
T Consensus 320 ~~~r~gKr~GA~~~~~~~~~~P~i~~Nf~~-----t~~dV-~TL~HE~GHalH~ 367 (567)
T 3sks_A 320 LVAKKGKAGGGYCTYIENYKAPFIFSNFNG-----TSGDI-DVLTHEAGHAFQV 367 (567)
T ss_dssp EECCTTCCSSCEEEEEGGGTEEEEEEEECS-----STHHH-HHHHHHHHHHHHH
T ss_pred cCCCCCCCCCccccCCCCCCCCeEEEcCCC-----CcchH-HHHHHHccHHHHH
Confidence 333344 778999987543 3444333 22 44554 4589999998773
No 96
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=42.15 E-value=30 Score=25.31 Aligned_cols=32 Identities=9% Similarity=0.224 Sum_probs=28.1
Q ss_pred ceEEEEEecC-CCCCCceEEEEE-CCEEEEEEEE
Q psy5221 335 NKYRITMAIA-GFNRSDLEIETE-RDTLRITGRK 366 (436)
Q Consensus 335 ~~~~v~~~lp-G~~~edi~v~~~-~~~l~i~g~~ 366 (436)
..|.=.+.|| +++++.|+=++. ++.|+|+..+
T Consensus 50 ~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lPK 83 (85)
T 3q9p_A 50 RCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPM 83 (85)
T ss_dssp EEEEEEEECCTTCCGGGCEEEECTTSEEEEEEEC
T ss_pred EEEEEEEECCCCcChHHcEEEECCCCEEEEEEEc
Confidence 4688889999 799999999998 9999999765
No 97
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=41.67 E-value=9.5 Score=38.45 Aligned_cols=16 Identities=13% Similarity=0.150 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5221 116 LEIKAIIAHEISHISN 131 (436)
Q Consensus 116 ~El~aVLAHElgHi~~ 131 (436)
-.++.++||||||.-.
T Consensus 132 ~~~A~t~AHELGHnLG 147 (510)
T 3g5c_A 132 DLMAVTLAQSLAHNIG 147 (510)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHcC
Confidence 3578899999999765
No 98
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=41.50 E-value=14 Score=38.28 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhcCCCCC----eEEEEC-C-CccEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHHHHHHhhhcChH
Q psy5221 64 LLKTVNKISKNANISTP----EVAIYN-G-EINAFATGAFKNSSLIAISANLLESMTKLEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~p----~v~v~~-~-~~NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLAHElgHi~~~h~ 134 (436)
..+.++-+.+..| +.| ++.+++ + ...|+-. -++++.+..++. ++.++..|+|||++|...++.
T Consensus 243 ~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn-----~glt~~~~~ll~--~~~~~~~viaHElAHqWfGnl 311 (632)
T 2xq0_A 243 VEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMES-----PNMTFATPTLLA--HDRSNIDVIAHELAHSWSGNL 311 (632)
T ss_dssp HHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECC-----TTCEEECGGGCC--SSSCSTHHHHHHHHHTTBTTT
T ss_pred HHHHHHHHHHhcc-cCCcccccEEEECCCCCCCcccc-----ceEEEeeceecc--CchhHHHHHHHHHHHHHhcCC
Confidence 3455666666677 533 344443 3 2222211 123555554442 344678999999999999874
No 99
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=41.00 E-value=37 Score=28.16 Aligned_cols=35 Identities=11% Similarity=0.128 Sum_probs=30.6
Q ss_pred ceEEEEEecC-CCCCCceEEEEECCEEEEEEEEecc
Q psy5221 335 NKYRITMAIA-GFNRSDLEIETERDTLRITGRKQAD 369 (436)
Q Consensus 335 ~~~~v~~~lp-G~~~edi~v~~~~~~l~i~g~~~~~ 369 (436)
..|.=.+.|| +++.+.|+-+.+++.|+|+-.+.++
T Consensus 117 g~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 117 EEIYRTIKLPATVKEENASAKFENGVLSVILPKAES 152 (161)
T ss_dssp CEEEEEEECSSCBCGGGCEEEEETTEEEEEEEBCGG
T ss_pred ccEEEEEECCCCcccccEEEEEECCEEEEEEEcCCC
Confidence 4688889999 6999999999999999999887654
No 100
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 3aho_A* 2h1n_A 2h1j_A
Probab=40.91 E-value=12 Score=38.11 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=24.4
Q ss_pred CccEEEeCCCC-CccEEEEcHHHHhhcCHHHHHHHHHHHHHhhhc
Q psy5221 88 EINAFATGAFK-NSSLIAISANLLESMTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 88 ~~NA~~~G~~~-~~~~v~it~gLl~~l~~~El~aVLAHElgHi~~ 131 (436)
...||+.++.. ..++|+.+- .. +-+++.. |+||+||..|
T Consensus 324 ~~Ga~~~~~~~~~~P~i~~Nf---~~-t~~dv~T-L~HE~GHa~H 363 (564)
T 3ahn_A 324 ASGGYCTYIENYKAPFIFSNF---TG-TSGDIDV-LTHEAGHAFQ 363 (564)
T ss_dssp CSSCEEEEEGGGTEEEEEEEE---CS-STHHHHH-HHHHHHHHHH
T ss_pred CCCCcccCCCCCCCCEEEEeC---CC-Cccchhh-HHHHhCHHHH
Confidence 67899887543 233443321 11 5566665 9999999766
No 101
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=40.36 E-value=50 Score=28.43 Aligned_cols=46 Identities=9% Similarity=0.199 Sum_probs=32.1
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEe--eCcEEEEEEec
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFF--DQGILNIDLIR 413 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~--~~GvL~i~~pk 413 (436)
|+.++|+++++.++|+|.+ |+-+|.|. +..+ +-.. +++.|.|+.+.
T Consensus 13 P~gV~v~i~~~~V~VkGPk----------------G~L~~~~~-~~~v---~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPR----------------GKLTRNFK-HLNL---DFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEETTEEEEEETT----------------EEEEEECC-CTTE---EEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeCCEEEEECCC----------------ceEEEEcc-CCcE---EEEEEcCCCEEEEEECC
Confidence 5899999999999999874 55665543 1222 3334 78888887654
No 102
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=40.34 E-value=16 Score=37.56 Aligned_cols=63 Identities=16% Similarity=0.269 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhcCCCC--CeE--EEEC-C-CccEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHHHHHHhhhcChH
Q psy5221 64 LLKTVNKISKNANIST--PEV--AIYN-G-EINAFATGAFKNSSLIAISANLLESMTKLEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~--p~v--~v~~-~-~~NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLAHElgHi~~~h~ 134 (436)
..++++-+.+..| +. ++. .+++ + ...|+ .+.+..+.+..++. ++.++..|+|||++|...|+.
T Consensus 242 ~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgM-----En~gltf~~~~ll~--~~~~~~~viaHElaHqWfGnl 310 (605)
T 3cia_A 242 TQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGM-----ENPRLSFITPTVVA--GDKSLVNLIAHELAHSWSGNL 310 (605)
T ss_dssp HHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEE-----CCTTEEEECGGGCC--SSSCSTHHHHHHHHHTTBTTT
T ss_pred HHHHHHHHHHHhC-CCCCccccEEEECCccCCCcc-----cCCcEEEecchhcc--CcHHHHHHHHHHHHHHhhccc
Confidence 4456666666777 53 333 3332 2 22221 11234555554432 344578899999999999874
No 103
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=39.62 E-value=34 Score=25.96 Aligned_cols=33 Identities=9% Similarity=0.213 Sum_probs=28.9
Q ss_pred EEEEEecC-CCCCCceEEEE-ECCEEEEEEEEecc
Q psy5221 337 YRITMAIA-GFNRSDLEIET-ERDTLRITGRKQAD 369 (436)
Q Consensus 337 ~~v~~~lp-G~~~edi~v~~-~~~~l~i~g~~~~~ 369 (436)
|.=.+.|| +++.++|+-++ .++.|+|+..+..+
T Consensus 56 F~R~~~LP~~vd~~~i~A~~s~nGvL~I~lPK~~~ 90 (101)
T 2wj5_A 56 FHRRYRLPPGVDPAAVTSALSPEGVLSIQATPASA 90 (101)
T ss_dssp EEEEEECCTTBCTTCCEEEECTTSEEEEEECBCCC
T ss_pred EEEEEECCCCcChhHCEEEECCCCEEEEEEECCCc
Confidence 88899999 78999999999 79999999876544
No 104
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=39.44 E-value=36 Score=26.08 Aligned_cols=35 Identities=14% Similarity=0.258 Sum_probs=30.4
Q ss_pred eEEEEEecC-CCCCCceEEEE-ECCEEEEEEEEeccc
Q psy5221 336 KYRITMAIA-GFNRSDLEIET-ERDTLRITGRKQADT 370 (436)
Q Consensus 336 ~~~v~~~lp-G~~~edi~v~~-~~~~l~i~g~~~~~~ 370 (436)
+|.=.+.|| +++++.|+=++ +++.|+|+..+..+.
T Consensus 56 eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~~~ 92 (106)
T 3l1e_A 56 EFHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPSG 92 (106)
T ss_dssp EEEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCCCC
T ss_pred EEEEEEECCCCcChhHcEEEECCCCEEEEEEEccCcc
Confidence 388889999 78999999999 799999999886653
No 105
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} SCOP: d.92.1.0
Probab=39.00 E-value=18 Score=36.19 Aligned_cols=64 Identities=14% Similarity=0.112 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhcCCCCCeEEEECCCccEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHHHHHHhhhc
Q psy5221 64 LLKTVNKISKNANISTPEVAIYNGEINAFATGAFKNSSLIAISANLLESMTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~p~v~v~~~~~NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLAHElgHi~~ 131 (436)
-.+...++++.+|++..+-.+ |..+-.|+.|++++. |-+|+-.-+.--..-+-++| ||.||-..
T Consensus 209 Q~~l~~~~l~~lGfD~~~GRl-d~S~HPF~~~~~~~D--vRITTry~e~d~~~~l~s~i-HE~GHAlY 272 (501)
T 3hq2_A 209 QKELSLYFLQELGYDFDGGRL-DETVHPFATTLNRGD--VRVTTRYDEKDFRTAIFGTI-HECGHAIY 272 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSCCE-EECSSCCEEEEETTE--EEEEECCCTTCTHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCccccee-CCCCCCCCCCCCCCC--eEEeeeecCccHHHHHHHHH-HHHhHHHH
Confidence 456677889999999655333 226667888876643 65666221111223444444 99999776
No 106
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=38.79 E-value=38 Score=36.60 Aligned_cols=68 Identities=24% Similarity=0.219 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhcCCCC--CeE--EEECCCccEEEeCCCCCccEEEEcHHH-Hhh---cC---HHHHHHHHHHHHHhhhcC
Q psy5221 64 LLKTVNKISKNANIST--PEV--AIYNGEINAFATGAFKNSSLIAISANL-LES---MT---KLEIKAIIAHEISHISNG 132 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~--p~v--~v~~~~~NA~~~G~~~~~~~v~it~gL-l~~---l~---~~El~aVLAHElgHi~~~ 132 (436)
..+.++-..+..|++. ++. ..+++ .|+.+. .+.+.+++.... +.. .+ ...+..|+|||++|-..|
T Consensus 234 ~~~~l~~~e~~fG~pYP~~kyd~VavPd-F~~GaM---EN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFG 309 (889)
T 3ebh_A 234 LKKSMAFDEDYFGLEYDLSRLNLVAVSD-FNVGAM---ENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTG 309 (889)
T ss_dssp HHHHHHHHHHHHCCCCCSSEEEEEEESC-CSSSEE---CCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHHHHCCCCCCCceEEEEecc-ccchhh---cCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhc
Confidence 4455666667788763 343 33343 222122 223345454432 211 11 235789999999999999
Q ss_pred hHH
Q psy5221 133 DMV 135 (436)
Q Consensus 133 h~~ 135 (436)
+..
T Consensus 310 NlV 312 (889)
T 3ebh_A 310 NRV 312 (889)
T ss_dssp TTB
T ss_pred Cee
Confidence 853
No 107
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=38.65 E-value=50 Score=28.47 Aligned_cols=46 Identities=4% Similarity=0.220 Sum_probs=32.0
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEE-eeCcEEEEEEec
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAF-FDQGILNIDLIR 413 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~-~~~GvL~i~~pk 413 (436)
|+.++|+++++.++|+|.+ |+-+|.|.- .+++ -. .+++.|.|+.+.
T Consensus 13 P~gV~v~i~~~~V~VkGPk----------------G~L~~~~~~-~~v~---i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPR----------------GTLTKNLKH-IDVT---FTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEETTEEEEEETT----------------EEEEEECTT-TCCE---EEEEETTEEEEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCC----------------eEEEEEccC-CcEE---EEEecCCeEEEEECC
Confidence 5899999999999999874 556665531 1333 22 458888888654
No 108
>3ce2_A Putative peptidase; structural genomics, unknown function, P protein structure initiative; 2.60A {Chlamydophila abortus}
Probab=38.51 E-value=23 Score=36.56 Aligned_cols=40 Identities=20% Similarity=0.392 Sum_probs=25.3
Q ss_pred CccEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHHHHHHhhhcC
Q psy5221 88 EINAFATGAFKNSSLIAISANLLESMTKLEIKAIIAHEISHISNG 132 (436)
Q Consensus 88 ~~NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLAHElgHi~~~ 132 (436)
...||+.|......+|+.+- -. +-+++.. |+||+||..|.
T Consensus 371 r~Ga~~~~~~~~~p~i~~N~--~~--t~~dv~T-L~HE~GHalH~ 410 (618)
T 3ce2_A 371 RSGAYSSGCYDSHPYVLLNY--TG--TLYDVSV-IAHEGGHSMHS 410 (618)
T ss_dssp CCSCEEECCTTSCCEEECCC--CS--SHHHHHH-HHHHHHHHHHH
T ss_pred CCCCccCCCCCCCceEEEec--CC--chhHHHH-HHHHhchHHHH
Confidence 56899888433344443321 11 5667666 99999998774
No 109
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=38.03 E-value=12 Score=36.69 Aligned_cols=15 Identities=27% Similarity=0.395 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.|..|.+||+||...
T Consensus 375 ~l~~Va~HE~GHaLG 389 (425)
T 1l6j_A 375 SLFLVAAHEFGHALG 389 (425)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhhcc
Confidence 578999999999877
No 110
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=37.21 E-value=11 Score=34.35 Aligned_cols=17 Identities=29% Similarity=0.280 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhhhc-ChH
Q psy5221 118 IKAIIAHEISHISN-GDM 134 (436)
Q Consensus 118 l~aVLAHElgHi~~-~h~ 134 (436)
+.-.++||+||+-. .|+
T Consensus 162 ~g~TltHEvGH~LGL~Ht 179 (262)
T 2cki_A 162 KGRTATHEIGHWLNLYHI 179 (262)
T ss_dssp SSHHHHHHHHHHTTCCCT
T ss_pred ccchhhhhhhhhhcceee
Confidence 46799999999876 554
No 111
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=36.66 E-value=11 Score=35.10 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhcCCC---CCe-EEE-ECC-CccEEEeCCCCCccEEEEcHHHHhhcCH-HHHHHHHHHHHHhhhcChH
Q psy5221 64 LLKTVNKISKNANIS---TPE-VAI-YNG-EINAFATGAFKNSSLIAISANLLESMTK-LEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 64 L~~~l~~l~~~~g~~---~p~-v~v-~~~-~~NA~~~G~~~~~~~v~it~gLl~~l~~-~El~aVLAHElgHi~~~h~ 134 (436)
.++...+.-.+.++. .+- .+| +.. ..|||--|. . +++..|==..+.+ -.-.=|+||||+|-.-.+.
T Consensus 73 t~d~y~~~~grnsid~~G~~l~~~VHyg~~y~NAfW~g~----~-m~fGDGdg~~f~~~~~slDVvaHEltHGVt~~t 145 (304)
T 4ger_A 73 TYDYYKAKFGRNSIDGRGLQLRSTVHYGSRYNNAFWNGS----Q-MTYGDGDGSTFIAFSGDPDVVGHELTHGVTEYT 145 (304)
T ss_dssp HHHHHHHHHCCCTTTSSCCCEEEEEEESSSCCCEEECSS----C-EEEECCCSSSBCCGGGSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCCCCCeEEEEEeCCCCccCceecCC----E-EEEeCCCCccccccccccchhhhcccccccccc
Confidence 445555555565554 111 112 233 789998863 2 4454441011111 1124599999999877664
No 112
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=35.19 E-value=14 Score=36.11 Aligned_cols=15 Identities=20% Similarity=0.368 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.|..|.+||+||...
T Consensus 365 ~l~~va~HE~GHaLG 379 (421)
T 1eak_A 365 SLFLVAAHQFGHAMG 379 (421)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhccC
Confidence 578999999999877
No 113
>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase; 2.20A {Pyrococcus furiosus} SCOP: d.92.1.5 PDB: 1k9x_A 1ka4_A
Probab=34.93 E-value=28 Score=34.87 Aligned_cols=63 Identities=11% Similarity=0.039 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcCCCCC-eEEEECCCccEEEeCCCCCccEEEEcHHHHhhcCHH---HHHHHHHHHHHhhhcCh
Q psy5221 64 LLKTVNKISKNANISTP-EVAIYNGEINAFATGAFKNSSLIAISANLLESMTKL---EIKAIIAHEISHISNGD 133 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~p-~v~v~~~~~NA~~~G~~~~~~~v~it~gLl~~l~~~---El~aVLAHElgHi~~~h 133 (436)
-.+.-.++++.+|++.. +-.+ |..+..|+.|++++. |-||+ ..+++ .-..-+.||.||-.+..
T Consensus 212 Q~~l~~~~~~~~G~d~~~~grl-D~s~HPF~~~~~~~D--vRITT----ry~e~d~~~~l~~~iHE~GHAlYeq 278 (499)
T 1ka2_A 212 MERVNLWILQKFGFPLGTRARL-DVSAHPFTTEFGIRD--VRITT----RYEGYDFRRTILSTVHEFGHALYEL 278 (499)
T ss_dssp HHHHHHHHHHHHTCCBTTTEEE-EECSSCCEEEEETTE--EEEEE----CCCSBCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccCcee-cCCCCCCcCCCCCCC--eeEEe----eecCccHHHHHHHHHHHhhHHHHHc
Confidence 56788889999999977 5444 334455899987644 55555 34333 22334789999987643
No 114
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=34.87 E-value=23 Score=22.98 Aligned_cols=20 Identities=20% Similarity=0.471 Sum_probs=17.4
Q ss_pred CCceEEEEECCEEEEEEEEe
Q psy5221 348 RSDLEIETERDTLRITGRKQ 367 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~ 367 (436)
-+||.|+-+++++++.|+.+
T Consensus 32 yndinvtwdgdtvtvegqle 51 (62)
T 2gjh_A 32 YNDINVTWDGDTVTVEGQLE 51 (62)
T ss_dssp CCSCEEEECSSCEEEEEECC
T ss_pred cccceeEEcCCEEEEEeEEc
Confidence 37899999999999999864
No 115
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=34.81 E-value=42 Score=28.99 Aligned_cols=45 Identities=16% Similarity=0.241 Sum_probs=32.5
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCC-ccceEeEEeeCcE---EEEEEec
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLAD-HVHVVAAFFDQGI---LNIDLIR 413 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~-~v~~~~A~~~~Gv---L~i~~pk 413 (436)
|+.++|+++++.++|+|.+ |+.++.| |. .+ +...+||. |.|+.|.
T Consensus 13 P~gV~V~i~~~~VtVkGpk----------------G~L~~~~--~~~~v---~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 13 PENVDITLKGRTVIVKGPR----------------GTLRRDF--NHINV---ELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp CTTCEEEEETTEEEEEETT----------------EEEEEEC--CSSSC---EEEEETTTTCEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCC----------------eEEEEEe--CCCCE---EEEEecCceeEEEEEcCC
Confidence 6899999999999999874 5566554 33 43 33457887 7777655
No 116
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=34.43 E-value=16 Score=32.45 Aligned_cols=14 Identities=21% Similarity=0.423 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhhh
Q psy5221 117 EIKAIIAHEISHIS 130 (436)
Q Consensus 117 El~aVLAHElgHi~ 130 (436)
=+.+|+.||+||..
T Consensus 47 l~~~v~~HElgH~~ 60 (224)
T 3b4r_A 47 LFVSVVLHELGHSY 60 (224)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35788899999974
No 117
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=34.21 E-value=13 Score=34.68 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhcCCCCCeEEEEC-C--CccEEEeCCCCCccEEEEcHHH--HhhcCHHHHHHHHHHHHHhhhcChH
Q psy5221 64 LLKTVNKISKNANISTPEVAIYN-G--EINAFATGAFKNSSLIAISANL--LESMTKLEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~p~v~v~~-~--~~NA~~~G~~~~~~~v~it~gL--l~~l~~~El~aVLAHElgHi~~~h~ 134 (436)
.++...+.-.+-++..+-+..+. + ..|||--|- . ..+.+|- +.-+. =.-|+|||++|=...+.
T Consensus 83 ~~d~y~~~~gr~~id~~l~~~Vhyg~~y~NAfWdG~----~-M~fGDG~~~~~p~~---~lDVv~HE~tHGVt~~~ 150 (301)
T 1u4g_A 83 VFKLYRDWFGTSPLTHKLYMKVHYGRSVENAYWDGT----A-MLFGDGATMFYPLV---SLDVAAHEVSHGFTEQN 150 (301)
T ss_dssp HHHHHHHHHSSCSSSSCEEEEESCTTTCCCEEECSS----C-EEECCCCSSBSCSC---CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCCceEEEEecCCCccCcEecCc----E-EEeeCCCccccccc---ccceeeeccccceeccc
Confidence 55666666667677643222232 2 779998652 2 3344432 11121 25699999999877664
No 118
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=34.06 E-value=13 Score=34.85 Aligned_cols=64 Identities=13% Similarity=0.141 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhcCCC---CCeEEEE--CC-CccEEEeCCCCCccEEEEcHHH---HhhcCHHHHHHHHHHHHHhhhcChH
Q psy5221 64 LLKTVNKISKNANIS---TPEVAIY--NG-EINAFATGAFKNSSLIAISANL---LESMTKLEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 64 L~~~l~~l~~~~g~~---~p~v~v~--~~-~~NA~~~G~~~~~~~v~it~gL---l~~l~~~El~aVLAHElgHi~~~h~ 134 (436)
.++...+.-.+.++. .+-+-.+ .. ..|||--|- . +++..|= +..+. .-.=|+|||++|-...+.
T Consensus 80 t~d~y~~~~gr~sid~~G~~l~~~VHyg~~y~NAfW~g~----~-m~fGDGdg~~f~~~~--~slDVv~HE~tHgvt~~~ 152 (316)
T 3dnz_A 80 TYDYYKNVHNRLSYDGNNAAIRSSVHYSQGYNNAFWNGS----Q-MVYGDGDGQTFIPLS--GGIDVVAHELTHAVTDYT 152 (316)
T ss_dssp HHHHHHHHHCCCTTTSSCCCEEEEESCTTTCCCEEECSS----C-EEECCCCSSSBSCGG--GCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCCCCceEEEEEecCCCccCceEcCC----E-EEEeCCCCccccccc--ccccceeeeecccccccc
Confidence 345555555565554 2212222 22 789998863 2 5555541 11111 114599999999877654
No 119
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=33.54 E-value=13 Score=34.56 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=24.3
Q ss_pred CccEEEeCCCCCccEEEEcHHH---HhhcCHHHHHHHHHHHHHhhhcChH
Q psy5221 88 EINAFATGAFKNSSLIAISANL---LESMTKLEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 88 ~~NA~~~G~~~~~~~v~it~gL---l~~l~~~El~aVLAHElgHi~~~h~ 134 (436)
..|||--|- . +++..|= +..++ .=.-|+|||++|=...+.
T Consensus 112 y~NAfWdg~----~-m~fGdGdg~~f~~~~--~~lDVv~HE~tHGVt~~~ 154 (301)
T 1bqb_A 112 RNNAAWIGD----K-MIYGDGDGRTFTNLS--GANDVVAHEITHGVTQQT 154 (301)
T ss_dssp TTCEEECSS----S-EEECCCCSSSBSCGG--GCHHHHHHHHHHHHHHHT
T ss_pred ccCcEEcCC----E-EEEEcCCCcccCCcc--cccceeeeecccceeccc
Confidence 579997762 2 4455541 22221 124689999999877664
No 120
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=33.47 E-value=17 Score=32.22 Aligned_cols=46 Identities=17% Similarity=0.308 Sum_probs=32.7
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEeeCcEEEEEEec
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFFDQGILNIDLIR 413 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~~~GvL~i~~pk 413 (436)
|+.++|+++++.++|+|.+ |+.++.| |..++.. ..+||.|.|+.+.
T Consensus 54 P~gV~V~i~~~~VtVKGPk----------------G~L~~~~--~~~v~i~--~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPL----------------GELALTY--PREVELT--KEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESSSEEEECCSS----------------CCEEEEC--CSSCEEE--ECSSSCEEEECSS
T ss_pred CCCCEEEEeCCEEEEECCC----------------eEEEEEc--CCCEEEE--EecCCEEEEEcCC
Confidence 5788899999999999874 5566555 5544320 4689988888765
No 121
>2x7m_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.50A {Methanopyrus kandleri}
Probab=33.12 E-value=21 Score=30.93 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=24.8
Q ss_pred CccEEEeCCCC-CccEEEEcHHHHhh----cCHHHHHHHHHHHHHhhhc
Q psy5221 88 EINAFATGAFK-NSSLIAISANLLES----MTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 88 ~~NA~~~G~~~-~~~~v~it~gLl~~----l~~~El~aVLAHElgHi~~ 131 (436)
...||+.|... ...+-+++..-+.. .....+..+++||+||.-.
T Consensus 104 ~g~afv~G~c~~~~svgVvs~~Rl~~~~~~~~~~r~~~~~~HElGH~lG 152 (195)
T 2x7m_A 104 PGLNFVFGQARCPGREAVVSVARLLDPDPELYLERVVKELTHELGHTFG 152 (195)
T ss_dssp TTCSCBSEEECSSSSEEEEECTTTCCSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCccceEEEeeCCCcEEEEEecccCcchhHHHHHHHHHHHHHHHHhhcC
Confidence 35577777653 23334444311110 1223577899999999965
No 122
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=31.99 E-value=42 Score=24.06 Aligned_cols=20 Identities=20% Similarity=0.493 Sum_probs=16.9
Q ss_pred CCceEEEEECCEEEEEEEEe
Q psy5221 348 RSDLEIETERDTLRITGRKQ 367 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~ 367 (436)
-+||.|+.+++++++.|+.+
T Consensus 76 yndinvtfdgdtvtvegqle 95 (106)
T 1qys_A 76 YNDINVTFDGDTVTVEGQLE 95 (106)
T ss_dssp CCEEEEEEETTEEEEEEEC-
T ss_pred CcceeEEEcCCeEEEEeEEc
Confidence 37899999999999999864
No 123
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=31.91 E-value=33 Score=25.35 Aligned_cols=33 Identities=9% Similarity=0.255 Sum_probs=27.4
Q ss_pred eEEEEEecC-CCCCCceEEEE-ECCEEEEEEEEec
Q psy5221 336 KYRITMAIA-GFNRSDLEIET-ERDTLRITGRKQA 368 (436)
Q Consensus 336 ~~~v~~~lp-G~~~edi~v~~-~~~~l~i~g~~~~ 368 (436)
+|.=.+.|| +++.+.|+-++ .++.|+|+..+..
T Consensus 50 ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK~~ 84 (90)
T 2y1y_A 50 EFHRKYRIPADVDPLTITSSMSSDGVLTVNGPRKQ 84 (90)
T ss_dssp EEEEEEECCTTBCGGGCEEEECTTSEEEEEECBC-
T ss_pred EEEEEEECCCCcChhHcEEEECCCCEEEEEEEcCC
Confidence 377788998 68999999999 7999999976643
No 124
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=31.74 E-value=15 Score=34.88 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=24.2
Q ss_pred CccEEEeCCCCCccEEEEcHHHHhhc-CHHHHHHHHHHHHHhhhcChH
Q psy5221 88 EINAFATGAFKNSSLIAISANLLESM-TKLEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 88 ~~NA~~~G~~~~~~~v~it~gLl~~l-~~~El~aVLAHElgHi~~~h~ 134 (436)
..|||--|- . .++.+|--..+ +...=.-|+|||++|=...+.
T Consensus 130 y~NAfWdG~----~-M~fGDG~g~~f~~~~~~lDVv~HEltHGVt~~~ 172 (341)
T 2vqx_A 130 YQNAFWNGQ----Q-MVFGDGDGEIFNRFTIAIDVVGHALAHGVTESE 172 (341)
T ss_dssp CCCEEECSS----C-EEECCCCSSSBCCTTSCHHHHHHHHHHHHHHHT
T ss_pred ccCceecCc----E-eEeeCCCCcccCCcccchhhhhhhcccceeccc
Confidence 789998762 3 44555421111 111113599999999776654
No 125
>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A {Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A* 2x8y_A* 2x97_A* 2xhm_A* 3zqz_A* 2x94_A* 2x92_A* 2x93_A* 2x95_A* 1j36_A* 1j37_A* 1j38_A
Probab=31.32 E-value=57 Score=33.45 Aligned_cols=64 Identities=17% Similarity=0.231 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhcCCCC-Ce-EE---EEC------C-CccEEEeCC-CCCccEEEEcHHHHhhcCHHHHHHHHHHHHHhh
Q psy5221 63 WLLKTVNKISKNANIST-PE-VA---IYN------G-EINAFATGA-FKNSSLIAISANLLESMTKLEIKAIIAHEISHI 129 (436)
Q Consensus 63 ~L~~~l~~l~~~~g~~~-p~-v~---v~~------~-~~NA~~~G~-~~~~~~v~it~gLl~~l~~~El~aVLAHElgHi 129 (436)
..++..+++...+|+++ |. .+ +.+ + ..-+|+.++ ++....|..++ ..+.+.+.. +-||+||.
T Consensus 282 ~m~~~~~~~~~slG~~~~~~~f~~~sm~~rp~~~rd~~chp~a~~~~~~~D~RI~~~t----~~~~~d~~~-~~HE~GHa 356 (598)
T 2x96_A 282 KMFQMGDDFFTSMNLTKLPQDFWDKSIIEKPTDGRDLVCHASAWDFYLTDDVRIKQCT----RVTQDQLFT-VHHELGHI 356 (598)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHCBCSCCSSSCCCCCSCEEEECSSSSCEEEECCC----CSSHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccchHHHHHHHHcCccCCCCCCcCCCccccCCCCCceEeeCC----CCChhhHhH-HHHHHHHH
Confidence 58888999999999981 11 10 011 2 557788877 34443343354 347777776 78999999
Q ss_pred hc
Q psy5221 130 SN 131 (436)
Q Consensus 130 ~~ 131 (436)
.+
T Consensus 357 ~Y 358 (598)
T 2x96_A 357 QY 358 (598)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 126
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=30.88 E-value=16 Score=34.07 Aligned_cols=63 Identities=21% Similarity=0.240 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhcCCCCCeE-EE-ECC-CccEEEeCCCCCccEEEEcHHH--HhhcCHHHHHHHHHHHHHhhhcChH
Q psy5221 64 LLKTVNKISKNANISTPEV-AI-YNG-EINAFATGAFKNSSLIAISANL--LESMTKLEIKAIIAHEISHISNGDM 134 (436)
Q Consensus 64 L~~~l~~l~~~~g~~~p~v-~v-~~~-~~NA~~~G~~~~~~~v~it~gL--l~~l~~~El~aVLAHElgHi~~~h~ 134 (436)
.++...+.-.+.++..+-+ .| +.. ..|||--|. . +.+..|= +..+. -.-|++||++|-...+.
T Consensus 84 t~d~y~~~~gr~~id~~l~~~VHyg~~y~NAfWdg~----~-m~fGDG~~~~~~~~---slDVv~HE~tHGvt~~~ 151 (306)
T 3nqx_A 84 IFNMYNDWLGTAPLSFQLQMRVHYSSNYENAFWDGS----A-MTFGDGQNTFYPLV---SLDVSAHEVSHGFTEQN 151 (306)
T ss_dssp HHHHHHHHHSSCSSSSCEEEEEEESSSCCCEEECSS----C-EEEECCCSSBSCSC---CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCCceEEEEecCCCccCccccCC----E-EEEeCCCccccccc---ccchhhhhhccccccCC
Confidence 4666666666766654322 22 122 789998862 2 4444432 11121 25699999999877653
No 127
>2qr4_A Peptidase M3B, oligoendopeptidase F; structural genomics, PSI-2, protein ST initiative; 2.50A {Enterococcus faecium}
Probab=30.08 E-value=22 Score=36.42 Aligned_cols=39 Identities=18% Similarity=0.394 Sum_probs=13.8
Q ss_pred CccEEEeCCCCCccEEEEcHHHHhhcCHHHHHHHHHHHHHhhhc
Q psy5221 88 EINAFATGAFKNSSLIAISANLLESMTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 88 ~~NA~~~G~~~~~~~v~it~gLl~~l~~~El~aVLAHElgHi~~ 131 (436)
...||+.+......+|+.+- -. +-+++.. |+||+||..|
T Consensus 338 r~Ga~~~~~~~~~p~i~~Nf--~~--t~~dv~T-L~HE~GHalH 376 (587)
T 2qr4_A 338 RSGAYSSGSYDTNPYILLNW--HD--TLDQLFT-LVHEMGHSVH 376 (587)
T ss_dssp --------------------------CHHHHHH-HHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCeEEEec--CC--CcchHHH-HHHHhchHHH
Confidence 45688887322222222111 11 5667666 9999999877
No 128
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=29.24 E-value=82 Score=25.73 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=29.3
Q ss_pred ceEEEEEecC-CCCCCceEEEEECCEEEEEEEEecc
Q psy5221 335 NKYRITMAIA-GFNRSDLEIETERDTLRITGRKQAD 369 (436)
Q Consensus 335 ~~~~v~~~lp-G~~~edi~v~~~~~~l~i~g~~~~~ 369 (436)
..|.=.+.|| +++.+.|+-+.+++.|+|+-.+..+
T Consensus 104 g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 104 GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEV 139 (151)
T ss_dssp CCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCC
T ss_pred cEEEEEEECCCCccccceEEEEECCEEEEEEEccCc
Confidence 3577788998 6899999999999999999877544
No 129
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=27.43 E-value=54 Score=28.17 Aligned_cols=45 Identities=9% Similarity=0.245 Sum_probs=30.3
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEe-eCcEEEEEEe
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFF-DQGILNIDLI 412 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~-~~GvL~i~~p 412 (436)
|+.++|+++++.++|+|.+ |+-+|.|.= ..++. .. +++.|.|+.+
T Consensus 13 P~gV~v~i~~~~V~VkGPk----------------G~L~~~~~~-~~v~i---~~~~~~~l~v~~~ 58 (188)
T 4a17_E 13 PDKVTITAKQRVVEVKGPL----------------GTIKRAFRY-ASVDI---QKPTADNVKLQIW 58 (188)
T ss_dssp CTTCEEEEETTEEEEEETT----------------EEEEEECTT-SCCEE---CCCBTTBCEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCC----------------eEEEEEccC-CeEEE---EEccCCeEEEEEC
Confidence 6899999999999999874 455555431 13332 22 5777777754
No 130
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=27.34 E-value=52 Score=27.83 Aligned_cols=32 Identities=9% Similarity=0.243 Sum_probs=27.4
Q ss_pred EEEEEecC-CCCCCceEEEE-ECCEEEEEEEEec
Q psy5221 337 YRITMAIA-GFNRSDLEIET-ERDTLRITGRKQA 368 (436)
Q Consensus 337 ~~v~~~lp-G~~~edi~v~~-~~~~l~i~g~~~~ 368 (436)
|.=.+.|| +++.++|+-++ ++|.|+|+..+.+
T Consensus 118 F~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~ 151 (175)
T 2klr_A 118 FHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQ 151 (175)
T ss_dssp EEEEEECTTTCCTTTCEEEECTTSCEEEEEECC-
T ss_pred EEEEEECCCCcChhHeEEEEcCCCEEEEEEECCC
Confidence 77788998 79999999999 6999999987754
No 131
>1y79_1 Peptidyl-dipeptidase DCP; hinge bending, carboxypeptidase, neurolysin, ACE, hydrolase; HET: TRP; 2.00A {Escherichia coli}
Probab=27.07 E-value=27 Score=36.52 Aligned_cols=18 Identities=17% Similarity=0.267 Sum_probs=15.2
Q ss_pred cCHHHHHHHHHHHHHhhhc
Q psy5221 113 MTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 113 l~~~El~aVLAHElgHi~~ 131 (436)
|+-+|+.. |+||+||-.|
T Consensus 459 Lt~~dV~T-LfHE~GHalH 476 (680)
T 1y79_1 459 LLWDDVIT-LFHEFGHTLH 476 (680)
T ss_dssp CCHHHHHH-HHHHHHHHHH
T ss_pred CCHHHHHH-HHHHHHHHHH
Confidence 47788877 9999999777
No 132
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=27.05 E-value=23 Score=35.25 Aligned_cols=15 Identities=27% Similarity=0.308 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
-...|++|||||...
T Consensus 169 ~~~~va~HEiGHaLG 183 (471)
T 1sat_A 169 YGRQTFTHEIGHALG 183 (471)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred ccceeeeeecccccc
Confidence 347899999999875
No 133
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P
Probab=26.80 E-value=28 Score=36.41 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=14.8
Q ss_pred cCHHHHHHHHHHHHHhhhc
Q psy5221 113 MTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 113 l~~~El~aVLAHElgHi~~ 131 (436)
|+-+++.. |+||+||-.|
T Consensus 448 lt~~dV~T-LfHE~GHalH 465 (674)
T 2o36_A 448 LQHDEVRT-YFHEFGHVMH 465 (674)
T ss_dssp CCHHHHHH-HHHHHHHHHH
T ss_pred CCHHHHHH-HHHHHHHHHH
Confidence 36788766 9999999877
No 134
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=26.71 E-value=22 Score=30.31 Aligned_cols=43 Identities=12% Similarity=0.297 Sum_probs=31.1
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEeeeeeeEEEEEECCCccceEeEEeeCcEEEEEE
Q psy5221 348 RSDLEIETERDTLRITGRKQADTQQRNFLHRGIATRNFEHRFQLADHVHVVAAFFDQGILNIDL 411 (436)
Q Consensus 348 ~edi~v~~~~~~l~i~g~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v~~~~A~~~~GvL~i~~ 411 (436)
|++++|+++++.++|+|.+ |+.+|.| |..++ -..+|+.|.|+-
T Consensus 11 P~gV~v~i~~~~V~VkGpk----------------G~L~~~~--~~~v~---i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKINGQVITIKGKN----------------GELTRTL--NDAVE---VKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESSSEEECCBTT----------------BCCEEEC--CSSCE---EEEETTEEEEEC
T ss_pred CCCcEEEEeCCEEEEEcCC----------------EEEEEEC--CCCEE---EEEeCCEEEEEE
Confidence 5889999999999999874 4555555 54443 345788888873
No 135
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=26.68 E-value=24 Score=35.08 Aligned_cols=14 Identities=29% Similarity=0.442 Sum_probs=12.1
Q ss_pred HHHHHHHHHHhhhc
Q psy5221 118 IKAIIAHEISHISN 131 (436)
Q Consensus 118 l~aVLAHElgHi~~ 131 (436)
...|++||+||...
T Consensus 163 ~~~va~HEiGHaLG 176 (463)
T 1g9k_A 163 GRQTLTHEIGHTLG 176 (463)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhc
Confidence 57899999999765
No 136
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=26.59 E-value=29 Score=24.76 Aligned_cols=22 Identities=32% Similarity=0.567 Sum_probs=18.8
Q ss_pred CCCCCceEEEEECCEEEEEEEE
Q psy5221 345 GFNRSDLEIETERDTLRITGRK 366 (436)
Q Consensus 345 G~~~edi~v~~~~~~l~i~g~~ 366 (436)
-|+.+.|.+...-+.|+|+|+.
T Consensus 17 sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTEEEEEEEEC
T ss_pred EECCCEEEEEeCceEEEEEcCC
Confidence 3678899999999999999983
No 137
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=26.15 E-value=25 Score=35.15 Aligned_cols=14 Identities=29% Similarity=0.442 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhhhc
Q psy5221 118 IKAIIAHEISHISN 131 (436)
Q Consensus 118 l~aVLAHElgHi~~ 131 (436)
...|++|||||...
T Consensus 179 ~~~va~HEIGHaLG 192 (479)
T 1kap_P 179 GRQTLTHEIGHTLG 192 (479)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred cceeehhhhhhhhc
Confidence 56899999999765
No 138
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=25.38 E-value=67 Score=25.12 Aligned_cols=32 Identities=13% Similarity=0.040 Sum_probs=26.8
Q ss_pred eEEEEEecC-CCCCCce-EEEEECCEEEEEEEEe
Q psy5221 336 KYRITMAIA-GFNRSDL-EIETERDTLRITGRKQ 367 (436)
Q Consensus 336 ~~~v~~~lp-G~~~edi-~v~~~~~~l~i~g~~~ 367 (436)
.|.=.+.|| +++++.| +-+.++|.|+|+-.+.
T Consensus 82 ~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~ 115 (123)
T 3aab_A 82 YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIA 115 (123)
T ss_dssp EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGG
T ss_pred EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcC
Confidence 567778888 5899999 9999999999997654
No 139
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=25.33 E-value=17 Score=34.80 Aligned_cols=15 Identities=27% Similarity=0.321 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 106 ~~~~~~~HE~gH~lG 120 (365)
T 3ba0_A 106 NLFLTAVHEIGHSLG 120 (365)
T ss_dssp ESSHHHHHHHHHHHT
T ss_pred cceeehhhhhhhhhc
Confidence 467999999999875
No 140
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=25.27 E-value=1e+02 Score=24.62 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=22.2
Q ss_pred ccceEeEEee---CcEEEEEEecCCCCCCCCeEeeecCC
Q psy5221 394 HVHVVAAFFD---QGILNIDLIREVPEALKPRKIYINTT 429 (436)
Q Consensus 394 ~v~~~~A~~~---~GvL~i~~pk~~~~~~~~~~I~I~~~ 429 (436)
....++.+|+ ||+|+|+.-- ....+..+|.|+..
T Consensus 96 G~~~IeVtf~iD~nGiL~V~a~d--~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 96 GMPQIEVTFDIDADGILHVSAKD--KNSGKEQKITIKAS 132 (135)
T ss_dssp SSCCEEEEEEECTTSEEEEEEEE--TTTCCEEEEEEECS
T ss_pred ceeEEEEEEEECCCCEEEEEEEE--CCCCCEEEEEEecC
Confidence 3334555553 9999999964 34456678888654
No 141
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P
Probab=25.25 E-value=31 Score=36.08 Aligned_cols=18 Identities=22% Similarity=0.457 Sum_probs=14.8
Q ss_pred cCHHHHHHHHHHHHHhhhc
Q psy5221 113 MTKLEIKAIIAHEISHISN 131 (436)
Q Consensus 113 l~~~El~aVLAHElgHi~~ 131 (436)
|+-+++.. |+||+||-.|
T Consensus 464 lt~~dV~T-LfHE~GHalH 481 (678)
T 2o3e_A 464 LRHDEVET-YFHEFGHVMH 481 (678)
T ss_dssp CCHHHHHH-HHHHHHHHHH
T ss_pred CCHHHHHH-HHHHHHHHHH
Confidence 46788776 9999999877
No 142
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=24.58 E-value=27 Score=34.81 Aligned_cols=15 Identities=27% Similarity=0.308 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
-...|++||+||...
T Consensus 181 ~~~~va~HEiGHaLG 195 (479)
T 1k7i_A 181 YGRQTFTHEIGHALG 195 (479)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred ccccccHHHHHHhhc
Confidence 347899999999875
No 143
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=24.02 E-value=28 Score=34.36 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhhhc
Q psy5221 117 EIKAIIAHEISHISN 131 (436)
Q Consensus 117 El~aVLAHElgHi~~ 131 (436)
.+..|++||+||...
T Consensus 192 ~l~~v~~HE~GH~lG 206 (450)
T 1su3_A 192 NLHRVAAHELGHSLG 206 (450)
T ss_dssp BHHHHHHHHHHHHTT
T ss_pred ehhchhhhHHHHhcc
Confidence 378999999999866
Done!