RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy5224
(1178 letters)
>gnl|CDD|235622 PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M;
Reviewed.
Length = 497
Score = 512 bits (1321), Expect = e-170
Identities = 211/404 (52%), Positives = 291/404 (72%), Gaps = 12/404 (2%)
Query: 195 ITCITSLIGLLSLVGAPFFSGF------YSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLT 248
I I +L+ LL + + GF + +K WI F I Y LG+DG+SL + LT
Sbjct: 34 IALIGTLLTLL--LSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVDGISLLLVVLT 91
Query: 249 AFITLIIILISL-DIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIII 307
A +T + +L S +IKK++ YM+A L L G +IG F ALD +LFY+FFEA LIP++ +I
Sbjct: 92 ALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
Query: 308 GTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK---SFNILSWHQLSITKIEQI 364
G WGG NR YAA KFFLYTL+GSLLML+++IYL + +F+I L + Q
Sbjct: 152 GVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDIADLLNLPLPPGVQY 211
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD 424
WLF+ FFIAFA+K+P++P+HTWLPDAHV+APT GSV+LA I+LK+G YGLLRFSLP+FPD
Sbjct: 212 WLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPD 271
Query: 425 ASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA 484
AS+ F+ +IITL +I+IIY +L+A+ Q DIKKLIAYSSI+HMGFVTLGIF ++ IQGA
Sbjct: 272 ASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGA 331
Query: 485 IIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544
I QMISH L S+A+F+ +G LY+++ TR I+++GG+ V+P + FF+ F++A+ LPGT
Sbjct: 332 IFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
Query: 545 SGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
SGF+GEF+I+L + + N I + +T LI +A YSL L + ++F
Sbjct: 392 SGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMF 435
Score = 102 bits (257), Expect = 1e-22
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 6/168 (3%)
Query: 54 FPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS-PLF-ELSNTALSIILFIGAIT 111
FPLHTWLPD+ A +++ A ++ G + + R S PLF + S+ II+ +G I
Sbjct: 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIA 287
Query: 112 AFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHAFFKALLFL 168
+ L+ + Q DIK++IAYS++S +G++T+G+ +IF +++H A LFL
Sbjct: 288 IIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFL 347
Query: 169 SAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
G + + H +DI + GGL K MP+ L ++ +G P SGF
Sbjct: 348 LVGVLYDRL-HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
Score = 85.3 bits (212), Expect = 6e-17
Identities = 86/369 (23%), Positives = 158/369 (42%), Gaps = 46/369 (12%)
Query: 548 IGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMI-SGNNLLSIYL 606
I +++L+A+ + Y L +++ G +I + + +LL Y+
Sbjct: 83 ISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAAL----LWLEGGVIGVFAALDLLLFYV 138
Query: 607 GLELMSLTLCVLIAS--QKNNIFSSEAAIKYFILGILSSGFMLYGISILYGI----TGTL 660
E M + + LI KN I+ AA K+F+ +L S ML I L + TGT
Sbjct: 139 FFEAMLIPMYFLIGVWGGKNRIY---AATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTF 195
Query: 661 ELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST 720
++ + N + V L + + K+ + P H W+PD + A ++LL+
Sbjct: 196 DIADLLN----LPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAG 251
Query: 721 TPKLSLFVIIYRL----LIKCLLPLVIN----WQKILLILAIFSLIIGNVSAITQYNFKR 772
I+ ++ L++ LPL + + I++ L + ++I G + A+ Q + K+
Sbjct: 252 --------ILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKK 303
Query: 773 MIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNN 832
+IAYSSI+HMG + I + +F +I++ + F ++ +L +
Sbjct: 304 LIAYSSISHMGFVTLGIFAGNQL--------GIQGAIFQMISHGLSSAALFLLVGVLYDR 355
Query: 833 TCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLL 892
T ++ + GL + P A + F + G P T GF +F I F Q ++
Sbjct: 356 L--HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSF--QVNPVI 411
Query: 893 LLIIMCSLI 901
I LI
Sbjct: 412 AFIATTGLI 420
>gnl|CDD|223940 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M)
[Energy production and conversion].
Length = 497
Score = 452 bits (1164), Expect = e-147
Identities = 188/366 (51%), Positives = 266/366 (72%), Gaps = 2/366 (0%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-DIKKKLAEYMSAFLILSGLIIGA 283
WI + Y LG+DG+SL + LTA +TL+ IL S +I+K+ + + FL+L G +IG
Sbjct: 67 WIPQLGLSYHLGVDGISLLLVLLTALLTLLAILASWREIEKRPKLFYALFLLLEGGVIGV 126
Query: 284 FCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI 343
F ALD +LFY+F+E LIP++ +IG WGG R YAA KFFLYTL+GSL ML++ +YLY++
Sbjct: 127 FAALDLLLFYVFWELMLIPMYFLIGIWGGKRRIYAATKFFLYTLLGSLFMLLAFLYLYFL 186
Query: 344 SNK-SFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL 402
+ +F+IL L++ Q LF+ F IAFA+K+P++P+HTWLPDAHVEAPT GSVIL
Sbjct: 187 TGSPTFDILELLALNLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVIL 246
Query: 403 AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462
A I+LK+G YGLLRFSLP+FPDAS YF+ L++ L +ISIIY +L+A Q DIK+LIAYSS
Sbjct: 247 AGILLKMGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSS 306
Query: 463 IAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIIN 522
I+HMGFVTLGIF ++ + GA+ QM+SH LIS+A+F+ +G LY + TR I++ GG+ N
Sbjct: 307 ISHMGFVTLGIFSFNELGVSGAVFQMLSHGLISAALFLLVGVLYERTHTRDIADLGGLAN 366
Query: 523 VIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
+P + F++F++A+ LPGTSGF+GEF+I+L + + + L + LI +A Y L +
Sbjct: 367 KMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGSFQVFPWVAFLAAFGLILTAVYMLWM 426
Query: 583 SKNIIF 588
+ + F
Sbjct: 427 YQRVFF 432
Score = 101 bits (253), Expect = 5e-22
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 23 IGFWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVT 81
I L + FL I K FPLHTWLPD+ +E PT S ++ A ++
Sbjct: 194 ILELLALNLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVIL-AGILLK 252
Query: 82 AGIFMITRMS-PLFELSNTALSIILFI-GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGY 139
G + + R S PLF ++ + +L G I+ + L+ Q DIKR+IAYS++S +G+
Sbjct: 253 MGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSSISHMGF 312
Query: 140 MTVG------LGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYM 193
+T+G LGVS ++F +++H A LFL G ++ H +DI ++GGL M
Sbjct: 313 VTLGIFSFNELGVSG---AVFQMLSHGLISAALFLLVG-VLYERTHTRDIADLGGLANKM 368
Query: 194 PITCITSLIGLLSLVGAPFFSGF 216
P ++ ++ +G P SGF
Sbjct: 369 PKLAALFMLFAMASLGLPGTSGF 391
Score = 91.9 bits (229), Expect = 4e-19
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 41/311 (13%)
Query: 600 NLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT 657
+LL Y+ ELM + + LI K I+ AA K+F+ +L S FML LY +T
Sbjct: 131 DLLLFYVFWELMLIPMYFLIGIWGGKRRIY---AATKFFLYTLLGSLFMLLAFLYLYFLT 187
Query: 658 GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL 717
G+ + N+ V L L ++ + K+ + P H W+PD + A +++
Sbjct: 188 GSPTFD--ILELLALNLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVI 245
Query: 718 LSTTPKLSLFVIIYRL----LIKCLLPLVIN----WQKILLILAIFSLIIGNVSAITQYN 769
L+ I+ ++ L++ LPL + + +L+ L + S+I G + A Q +
Sbjct: 246 LAG--------ILLKMGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQTD 297
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA---ILGA-FGV 825
KR+IAYSSI+HMG + L IF+ + G+ + + + I A F +
Sbjct: 298 IKRLIAYSSISHMGFVT------------LGIFSFNELGVSGAVFQMLSHGLISAALFLL 345
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
+ +L T T ++ GL + P A + M+F + G P T GF +F I F+
Sbjct: 346 VGVLYERT--HTRDIADLGGLANKMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGSFQ 403
Query: 886 TQKIWLLLLII 896
L
Sbjct: 404 VFPWVAFLAAF 414
>gnl|CDD|200147 TIGR01972, NDH_I_M, proton-translocating NADH-quinone
oxidoreductase, chain M. This model describes the 13th
(based on E. coli) structural gene, M, of bacterial NADH
dehydrogenase I, as well as chain 4 of the corresponding
mitochondrial complex I and of the chloroplast NAD(P)H
dehydrogenase complex [Energy metabolism, Electron
transport].
Length = 481
Score = 446 bits (1150), Expect = e-145
Identities = 191/368 (51%), Positives = 269/368 (73%), Gaps = 1/368 (0%)
Query: 222 KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS-LDIKKKLAEYMSAFLILSGLI 280
WI I Y LG+DG+SL + LTA +TL+ IL S I+K++ E+ + L+L +
Sbjct: 60 DIPWIPALGISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGV 119
Query: 281 IGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL 340
IG F ALD LFY+F+EA LIP++++IG WGG NR YAA+KFFLYTL GSLLML++++ L
Sbjct: 120 IGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGL 179
Query: 341 YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSV 400
Y++ +F++L L + Q WLF+ FFIAFA+K+P++P+HTWLPDAHVEAPT GSV
Sbjct: 180 YFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSV 239
Query: 401 ILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAY 460
ILA ++LK+G YG LRF+LP+FPDAS YF+ ++ L +I+IIY +LIA+ Q DIK+LIAY
Sbjct: 240 ILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAY 299
Query: 461 SSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGI 520
SSI+HMGFV LGIF ++ I GA+ QMISH LI++A+F+ +G LY + TR I+ +GG+
Sbjct: 300 SSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGL 359
Query: 521 INVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSL 580
N +P + FF++F++A+ LPGTSGF+GEF+I+L + K N + L + ++ +AAY L
Sbjct: 360 ANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYML 419
Query: 581 CLSKNIIF 588
L K + F
Sbjct: 420 TLYKRVFF 427
Score = 102 bits (256), Expect = 2e-22
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 8 LFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSM-EG 66
L L + G L + PL FL I K FPLHTWLPD+ E
Sbjct: 177 LGLYFLGGGTFDLLE---LLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEA 233
Query: 67 PTPASALIHAATMVTAGIFMITRMSPLF-ELSNTALSIILFIGAITAFFMGLLGIIQNDI 125
PT S ++ + + PLF + S ++ +G I + L+ + Q DI
Sbjct: 234 PTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDI 293
Query: 126 KRIIAYSTLSQLGYMTVG------LGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKH 179
KR+IAYS++S +G++ +G LG+S ++F +++H A LFL G ++ H
Sbjct: 294 KRLIAYSSISHMGFVLLGIFSFNELGISG---AVFQMISHGLITAALFLLVG-VLYERAH 349
Query: 180 NQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
+DI GGL MP+ ++ ++ +G P SGF
Sbjct: 350 TRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
Score = 94.2 bits (235), Expect = 6e-20
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 28/303 (9%)
Query: 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGFMLY 648
G + + +L Y+ E M + + +LI N I+ AA+K+F+ + S ML
Sbjct: 118 GVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIY---AAMKFFLYTLAGSLLMLL 174
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSF--KLGISPFHMWVPDV 706
I LY + G F++++L N+ + L + ++F K+ + P H W+PD
Sbjct: 175 AILGLYFLGG-----GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDA 229
Query: 707 YQGASIIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
+ A +++L+ K+ + + R + + + +L L + ++I G + A+
Sbjct: 230 HVEAPTAGSVILAGVLLKMGTYGFL-RFNLPLFPDASLYFAPVLAALGVIAIIYGALIAL 288
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFN--SCDSGLFYIITYIFAILGAF 823
Q + KR+IAYSSI+HMG +L I S FN +F +I++ F
Sbjct: 289 AQTDIKRLIAYSSISHMGFVLLGIFS----------FNELGISGAVFQMISHGLITAALF 338
Query: 824 GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKI 883
++ +L T ++ + GL + P A M+F + G P T GF +F I
Sbjct: 339 LLVGVLYERA--HTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGS 396
Query: 884 FET 886
F+
Sbjct: 397 FKV 399
>gnl|CDD|235836 PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L;
Reviewed.
Length = 624
Score = 392 bits (1009), Expect = e-123
Identities = 157/300 (52%), Positives = 192/300 (64%), Gaps = 55/300 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR---------------- 44
+S+NL QLF GWE VG+ SYLLIGFWY KP A A +KAF++NR
Sbjct: 133 LSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAE 192
Query: 45 --------------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASA 72
IGAM KSAQFPLHTWLPD+MEGPTP SA
Sbjct: 193 FGSLNYDEVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSA 252
Query: 73 LIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
LIHAATMVTAG++++ RMSPLFELS AL + +GA+TA F +G++Q DIKR++AYS
Sbjct: 253 LIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYS 312
Query: 133 TLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKY 192
T+SQLGYM + LGV AY +IFHLMTHAFFKALLFL AGS+I M H QDIR MGGL K
Sbjct: 313 TMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKK 372
Query: 193 MPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFIT 252
MP+T T LIG L+L+G P F+GF+SKD + + + N + L + GL + AF+T
Sbjct: 373 MPVTYATFLIGTLALIGIPPFAGFFSKD-EILEAAFANGHINLFVAGL------VGAFLT 425
Score = 69.0 bits (170), Expect = 8e-12
Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 33/281 (11%)
Query: 316 SYAAIKFFLYTLMGSLLMLISMIYLYY---------ISNKSFNILSWHQLSITKIEQIWL 366
AA+K F+ +G + + + + L+ + + ++T +
Sbjct: 165 GAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSALT-----LI 219
Query: 367 FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIF--- 422
+ FI K +P+HTWLPDA +E PT S +I AA M+ G Y + R S P+F
Sbjct: 220 CLLLFIGAMGKSAQFPLHTWLPDA-MEGPTPVSALIHAATMVTAGVYLVARMS-PLFELS 277
Query: 423 PDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG--FVTLGIFMLTKIS 480
P+A + + ++ ++ + I +VQ DIK+++AYS+++ +G F+ LG+ +
Sbjct: 278 PEALL----FVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGV-----GA 328
Query: 481 IQGAIIQMISHALISSAMFISIGFLYNQMKTRL-ISNFGGIINVIPHFSVFFIIFSLANC 539
AI +++HA + +F+ G + + M I GG+ +P F+I +LA
Sbjct: 329 YAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALI 388
Query: 540 SLPGTSGFIGEFMIILSA-VKFNFCIGVLTSTALIFSAAYS 579
+P +GF + I+ +A + + V +A YS
Sbjct: 389 GIPPFAGFFSKDEILEAAFANGHINLFVAGLVGAFLTAFYS 429
Score = 51.3 bits (124), Expect = 2e-06
Identities = 80/344 (23%), Positives = 140/344 (40%), Gaps = 73/344 (21%)
Query: 588 FVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGF 645
F ++++ +NLL ++ G E + L +LI +K + + AA+K FI+ +
Sbjct: 124 FTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPS--AGAAAMKAFIVNRVGDVG 181
Query: 646 MLYGISILYGITGTLELQSIF-NVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+ GI +L+ G+L +F + + S L L LL+ +G K P H W+P
Sbjct: 182 LALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLP 241
Query: 705 D-----------------VYQGASIIITL--LLSTTPKLSLFVIIYRLLIKCLLPLVINW 745
D V G ++ + L +P+ LFV
Sbjct: 242 DAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFV----------------- 284
Query: 746 QKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSC 805
I+ + + + Q + KR++AYS+++ +G M ++ +
Sbjct: 285 ----AIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVG-----------AY 329
Query: 806 DSGLFYIITYIF--AI--LGAFGVIILLKNNTCNKTDELDIFI--GLHQRNPWCALIMMI 859
+ +F+++T+ F A+ LGA VI + E DI GL ++ P +I
Sbjct: 330 AAAIFHLMTHAFFKALLFLGAGSVIH-----AMH--HEQDIRKMGGLRKKMPVTYATFLI 382
Query: 860 FMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
+L G PP GF++K I E F I L + L+GA
Sbjct: 383 GTLALIGIPPFAGFFSKDEILEAAFANGHINLFVA----GLVGA 422
>gnl|CDD|233663 TIGR01974, NDH_I_L, proton-translocating NADH-quinone
oxidoreductase, chain L. This model describes the 12th
(based on E. coli) structural gene, L, of bacterial NADH
dehydrogenase I, as well as chain 5 of the corresponding
mitochondrial complex I and subunit 5 (or F) of the
chloroplast NAD(P)H-plastoquinone dehydrogenase complex
[Energy metabolism, Electron transport].
Length = 609
Score = 346 bits (890), Expect = e-106
Identities = 174/397 (43%), Positives = 222/397 (55%), Gaps = 65/397 (16%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR---------------- 44
+++N QLF GWE VG+ SYLLIGFWY KP A A +KAF++NR
Sbjct: 132 LADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWY 191
Query: 45 -----------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASALIH 75
IGAM KSAQ PLHTWLPD+MEGPTP SALIH
Sbjct: 192 FGTLNFQEVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIH 251
Query: 76 AATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLS 135
AATMVTAG++++ R SPLFELS TAL ++ IGAITA F + ++QNDIKRI+AYST+S
Sbjct: 252 AATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMS 311
Query: 136 QLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPI 195
QLGYM + LGV AY +IFHLMTHAFFKALLFL AGS+I M H QDIR MGGL K MP+
Sbjct: 312 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPV 371
Query: 196 TCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLII 255
T IT LIG L+L+G P F+GF+SKD + FL + GL F LTAF + +
Sbjct: 372 TYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAF--LTAFYSFRL 429
Query: 256 ILISLDIKKKLAEY---------MSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFII 306
I + K++ M LI+ L +G+ A G FE + +
Sbjct: 430 IFMVFHGKERHEADHHPHESPLVMLLPLIV--LAVGSVFA--GFFIVPLFE----FLKGV 481
Query: 307 IGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI 343
+ T + L + + ++ ++ Y +
Sbjct: 482 LPTSAEPALEHHH-VPALEIWSPTAVAILGILLAYLL 517
Score = 86.2 bits (214), Expect = 3e-17
Identities = 100/381 (26%), Positives = 179/381 (46%), Gaps = 47/381 (12%)
Query: 224 IWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGA 283
I + F + + L +DGLSL + + + ++ + S+ Y F L+
Sbjct: 68 ISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFT--- 124
Query: 284 FCAL------DGMLFYIFFEATLIPIFIIIGTWGGSNRSY--AAIKFFLYTLMGSLLMLI 335
F L + + + +E + +++IG W S AAIK F+ +G +L+
Sbjct: 125 FSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWY-KKPSANNAAIKAFVVNRVGDFGLLL 183
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQIWLFIT-----FFIAFAIKIPIWPMHTWLPDA 390
+ +++ F L++ ++ + +T FI K P+HTWLPDA
Sbjct: 184 GIFLIFW----YFGTLNFQEVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDA 239
Query: 391 HVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIF---PDASYYFSNLIITLSLISIIYISL 446
+E PT S +I AA M+ G Y + R S P+F P A Y L+ + I+ ++ +
Sbjct: 240 -MEGPTPVSALIHAATMVTAGVYLVARTS-PLFELSPTALY----LVTIIGAITALFAAT 293
Query: 447 IAMVQIDIKKLIAYSSIAHMG--FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGF 504
+A+VQ DIK+++AYS+++ +G F+ LG+ + AI +++HA + +F+ G
Sbjct: 294 VALVQNDIKRILAYSTMSQLGYMFLALGVG-----AYAAAIFHLMTHAFFKALLFLGAGS 348
Query: 505 LYNQMKTRL-ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK---- 559
+ + M I GG+ +P + F+I SLA PG +GF + +I+ +A
Sbjct: 349 VIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTH 408
Query: 560 -FNFCIGVLTSTALIFSAAYS 579
F F G++ + +A YS
Sbjct: 409 SFLFVAGLIGA---FLTAFYS 426
Score = 71.5 bits (176), Expect = 1e-12
Identities = 78/326 (23%), Positives = 142/326 (43%), Gaps = 35/326 (10%)
Query: 588 FVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFML 647
F ++++ +N L ++ G E + L +LI ++ AAIK F++ + +L
Sbjct: 123 FTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLL 182
Query: 648 YGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVY 707
GI +++ GTL Q +F + S L L LL+ +G K P H W+PD
Sbjct: 183 LGIFLIFWYFGTLNFQEVFAL--APGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAM 240
Query: 708 QGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAI---FSLIIGNVSA 764
+G + + L+ + T V L+ PL L ++ I + + A
Sbjct: 241 EGPTPVSALIHAAT-----MVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVA 295
Query: 765 ITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF----AIL 820
+ Q + KR++AYS+++ +G M ++ + + +F+++T+ F L
Sbjct: 296 LVQNDIKRILAYSTMSQLGYMFLALG-----------VGAYAAAIFHLMTHAFFKALLFL 344
Query: 821 GAFGVIILLKNNTCNKTDELDIFI--GLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFF 878
GA VI + E DI GL ++ P + +I +L GFP GF++K
Sbjct: 345 GAGSVIHAMH-------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDL 397
Query: 879 IFEKIFETQKIWLLLLI-IMCSLIGA 903
I E F + L + ++ + + A
Sbjct: 398 ILEAAFASGTHSFLFVAGLIGAFLTA 423
>gnl|CDD|235603 PRK05777, PRK05777, NADH:ubiquinone oxidoreductase subunit N;
Provisional.
Length = 476
Score = 335 bits (861), Expect = e-103
Identities = 140/315 (44%), Positives = 204/315 (64%), Gaps = 9/315 (2%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
+LG M+M+S N+LL+++LGLEL+SL L L A +++ S EAAIKYF+LG L+SGF+LY
Sbjct: 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLY 172
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
G+S+LYG TG+L I + + N +L L+ ++VGL+FKL PFHMW PDVY+
Sbjct: 173 GMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYE 232
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
GA +T L+T PK++ F ++ RLL+ L +WQ++L I+AI S+++GN++A++Q
Sbjct: 233 GAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQT 292
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828
N KR++AYSSIAH G +L + + + LFY++ Y+F LGAFGVI L
Sbjct: 293 NIKRLLAYSSIAHAGYLLVGLAAGTA--------EGYSAVLFYLLAYLFMTLGAFGVISL 344
Query: 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888
L+ + F GL +R+P A +M IFM SLAG PPT GF+ KF++FE E
Sbjct: 345 LRRKGGEAES-ISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGL 403
Query: 889 IWLLLLIIMCSLIGA 903
WL ++ ++ S IGA
Sbjct: 404 WWLAVIGVLNSAIGA 418
Score = 112 bits (284), Expect = 5e-26
Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 15/350 (4%)
Query: 237 IDGLSLWFIPLTAFITLIIILISLD--IKKKLAEYMSAFLI-LSGLIIGAFCALDGMLFY 293
+DG +L+ L +L+ +L++ + E+ L L G+++ A D + +
Sbjct: 71 VDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFALLGMMVMVS-ANDLLTLF 129
Query: 294 IFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILS 352
+ E +P++ + RS AAIK+F+ + S +L M LY + S +
Sbjct: 130 LGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATG-SLSFAG 188
Query: 353 WHQLSITKIEQIWLFIT----FFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLK 408
+ L + + A K+ P H W PD + APT + LA K
Sbjct: 189 IAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-K 247
Query: 409 LGCYG-LLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467
+ + LLR + F S + ++ +++ S++ +L A+ Q +IK+L+AYSSIAH G
Sbjct: 248 IAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAG 307
Query: 468 FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ-MKTRLISNFGGIINVIPH 526
++ +G+ T + ++++ ++ F I L + + IS+F G+ P
Sbjct: 308 YLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPL 367
Query: 527 FSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSA 576
+ IF L+ +P T+GF G+F + +AV+ L ++ SA
Sbjct: 368 LAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGL--WWLAVIGVLNSA 415
Score = 89.5 bits (223), Expect = 2e-18
Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 62/275 (22%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFL-------------------- 41
+N+L LFLG E++ + Y L D+ ++ A +K F+
Sbjct: 122 ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAT 181
Query: 42 ----INRIGAMAKSAQ-----------------------FPLHTWLPDSMEG-PTPASAL 73
I P H W PD EG PTP +A
Sbjct: 182 GSLSFAGIAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAF 241
Query: 74 IHAATMVTAGIFMITR-MSPLFELSNTALSIILFIGAITAFFMG-LLGIIQNDIKRIIAY 131
+ A + A ++ R + F + +L I AI + +G L + Q +IKR++AY
Sbjct: 242 LATAPKI-AAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAY 300
Query: 132 STLSQLGYMTVGL---GVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQ----DIR 184
S+++ GY+ VGL Y+ +F+L+ + F F +I ++ I
Sbjct: 301 SSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF----GVISLLRRKGGEAESIS 356
Query: 185 NMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+ GL K P+ I +LSL G P +GF+ K
Sbjct: 357 DFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGK 391
>gnl|CDD|164750 MTH00204, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 485
Score = 323 bits (829), Expect = 5e-99
Identities = 165/358 (46%), Positives = 230/358 (64%), Gaps = 5/358 (1%)
Query: 234 FLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLF 292
+DG+SL+FI LT + I ILIS IK E++ L L L+IG F LD +LF
Sbjct: 78 VFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLF 137
Query: 293 YIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKS-FNI 350
YI FE LIP+F++IG WG + A+ FF YT GS+ ML+ + LY I+ + + I
Sbjct: 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQI 197
Query: 351 LSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLG 410
L +L ++ Q WL + FF++ A+KIP P H WLP AHVEAP GSVILA I+LKLG
Sbjct: 198 LLNIKLPLSI--QKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLG 255
Query: 411 CYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVT 470
YG LRFS P+FP AS YF+ LI+ LS+I++IY SL Q+D K+LIAYSS+AHMG V
Sbjct: 256 GYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVP 315
Query: 471 LGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVF 530
LG+F T + A+ M++H +SSA+FI++ FLY + TRLI + G+ +P F +
Sbjct: 316 LGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVII 375
Query: 531 FIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
++ SLAN P + F+GEF +L+A +++ +GVL ++ +++SAAYSL L I F
Sbjct: 376 MLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISF 433
Score = 64.3 bits (157), Expect = 2e-10
Identities = 92/397 (23%), Positives = 173/397 (43%), Gaps = 47/397 (11%)
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573
I+ II+ +F ++F++ SL F I+L+ + CI + +
Sbjct: 59 INLIEWIISPTLNFQWGPLVFAVDGVSL---------FFILLTTLLIPICILISWKSIKF 109
Query: 574 FSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAI 633
+ LCL + ++G ++ +LL Y+ E + + + +LI + A+
Sbjct: 110 LFKEFLLCLLFLEVLLIGVFSVL---DLLLFYILFEGILIPMFLLIGIWGSREEKVRASY 166
Query: 634 KYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFK 693
+F S FML GI LY ITGT + Q + N+ +I +L L L+ K
Sbjct: 167 YFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLVGFFL----SLAVK 222
Query: 694 LGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKC--LLPLVIN-WQKILL 750
+ PFH+W+P + A + +++L+ + L + Y L L P + +++
Sbjct: 223 IPQIPFHIWLPQAHVEAPVAGSVILA---GILLKLGGYGFLRFSWPLFPAASEYFAPLIV 279
Query: 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS-----IKTSHNNLIIFNSC 805
+L++ ++I G+++ Q +FKR+IAYSS+AHMGL+ + + + + ++
Sbjct: 280 MLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFV 339
Query: 806 DSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLA 865
S LF +T+++ + T + + GL P +IM++ +
Sbjct: 340 SSALFIAVTFLYER---------------HHTRLIKYYRGLTLTMPLFVIIMLVLSLANM 384
Query: 866 GFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIG 902
GFP + F +FF FE L + + G
Sbjct: 385 GFPLSCNFVGEFFSLLAAFEYS-----LGLGVLVTSG 416
Score = 53.9 bits (130), Expect = 3e-07
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS-PLFELSNTALS-IILFI 107
K Q P H WLP + A ++I A ++ G + R S PLF ++ + +I+ +
Sbjct: 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVML 281
Query: 108 GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL---GVSAYTVSIFHLMTHAFFKA 164
I + L Q D KR+IAYS+++ +G + +GL + ++F ++ H F +
Sbjct: 282 SVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSS 341
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
LF+ A + + H + I+ GL MP+ I L+ L+ +G P F
Sbjct: 342 ALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNF 392
>gnl|CDD|214462 MTH00217, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 482
Score = 318 bits (818), Expect = 2e-97
Identities = 165/358 (46%), Positives = 236/358 (65%), Gaps = 5/358 (1%)
Query: 234 FLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLIIGAFCALDGMLF 292
+DG+S++F+ LTA +T I ILIS + IK + E++ L++ L++G F LD + F
Sbjct: 75 VFAVDGISIFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGF 134
Query: 293 YIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLY-YISNKSFNI 350
YI FE LIP+F+IIG WG + A+ FF YT +GS+ ML+ + LY Y +
Sbjct: 135 YILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQA 194
Query: 351 LSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLG 410
L L I K Q ++F+ FF++ AIKIP P H WLP AHVEAP GSVILA ++LKLG
Sbjct: 195 LC--CLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLG 252
Query: 411 CYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVT 470
YG +RFS P+ P+AS YFS LI TLSL++IIY SL Q+D+K++IAYSS+AHMG VT
Sbjct: 253 GYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVT 312
Query: 471 LGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVF 530
LGIF T + AI M++H L+SSA+FI++ FLY + TRLI + G++ +P F +
Sbjct: 313 LGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGIL 372
Query: 531 FIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
++ LAN S+P + F+GEF+ +L+A ++++ +GVL S ++ SA YS+ L + F
Sbjct: 373 MLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCF 430
Score = 62.0 bits (151), Expect = 1e-09
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 630 EAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVG 689
+A+ +F + S FML GI LY GT + Q++ + + + L +
Sbjct: 160 QASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIF----LGFFLS 215
Query: 690 LSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRL----LIKCLLPLVIN- 744
L+ K+ PFH+W+P + A + +++L+ ++ +L I+ PL+
Sbjct: 216 LAIKIPKIPFHIWLPQAHVEAPVAGSVILAG--------VLLKLGGYGFIRFSWPLLPEA 267
Query: 745 ---WQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
+ ++ L++ ++I G+++ Q + KR+IAYSS+AHMGL+ I S
Sbjct: 268 SEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFS 317
Score = 43.9 bits (104), Expect = 4e-04
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 50 KSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMS-PLF-ELSNTALSIILF 106
K + P H WLP + +E P A ++I A ++ G + R S PL E S +I
Sbjct: 219 KIPKIPFHIWLPQAHVEAPV-AGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQT 277
Query: 107 IGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL---GVSAYTVSIFHLMTHAFFK 163
+ + + L Q D+KRIIAYS+++ +G +T+G+ + +IF ++ H
Sbjct: 278 LSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVS 337
Query: 164 ALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
+ LF+ A + + H + I+ G+ MP+ I L+ +L+ P F
Sbjct: 338 SALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
>gnl|CDD|223941 COG1009, NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain
L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy
production and conversion / Inorganic ion transport and
metabolism].
Length = 606
Score = 300 bits (770), Expect = 3e-89
Identities = 143/304 (47%), Positives = 181/304 (59%), Gaps = 55/304 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+S+NL LF+ WE+ G+ASYLLIGFWY +P A A KAFL+ R+G
Sbjct: 123 LSDNLLLLFVFWELTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGLLLGIILLYLL 182
Query: 47 ----------------------------------AMAKSAQFPLHTWLPDSMEGPTPASA 72
A KSAQFP HTWLPD+MEGPTP SA
Sbjct: 183 TGTTLLSEELFAAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPDAMEGPTPVSA 242
Query: 73 LIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
L+HAATMV AG++++ R+SPLF LS AL +++ +GA+TA L+ ++QNDIKRI+AYS
Sbjct: 243 LLHAATMVKAGVYLLARLSPLFALSPEALWLVILVGAVTALLAALIALVQNDIKRILAYS 302
Query: 133 TLSQLGYMTVGLGVS--AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLY 190
T+SQLGYM V LG+ AY +IFHL+THAFFKALLFLSAGS+I +DIR +GGL
Sbjct: 303 TISQLGYMFVALGLGSLAYEAAIFHLVTHAFFKALLFLSAGSVIHAT-GTRDIRKLGGLR 361
Query: 191 KYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAF 250
K MPIT + LIG L+L G P F+GF+SKD I + GL L + A
Sbjct: 362 KKMPITFVAFLIGALALAGVPPFAGFFSKDM----ILEAALAASHLSGGLLLLLALIGAL 417
Query: 251 ITLI 254
+T
Sbjct: 418 LTAF 421
Score = 139 bits (353), Expect = 3e-34
Identities = 107/374 (28%), Positives = 186/374 (49%), Gaps = 15/374 (4%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
W+ + + L IDGLSL L + +I L S+ F L G+
Sbjct: 60 WLPSGGLNFGLRIDGLSLLMALLVTGVGFLIHLYSIGYMSHDPGL-GRFFAYLLLFTGSM 118
Query: 285 CAL----DGMLFYIFFEATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIY 339
L + +L ++F+E T + +++IG W + AA K FL T +G L +L+ +I
Sbjct: 119 LGLVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGLLLGIIL 178
Query: 340 LYYISNKSFN---ILSWHQLS-ITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAP 395
LY ++ + + + + I+ + + + K +P HTWLPDA +E P
Sbjct: 179 LYLLTGTTLLSEELFAAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPDA-MEGP 237
Query: 396 TEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDI 454
T S +L AA M+K G Y L R S P+F + L+I + ++ + +LIA+VQ DI
Sbjct: 238 TPVSALLHAATMVKAGVYLLARLS-PLFALSPEAL-WLVILVGAVTALLAALIALVQNDI 295
Query: 455 KKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514
K+++AYS+I+ +G++ + + L ++ + AI +++HA + +F+S G + + TR I
Sbjct: 296 KRILAYSTISQLGYMFVAL-GLGSLAYEAAIFHLVTHAFFKALLFLSAGSVIHATGTRDI 354
Query: 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIF 574
GG+ +P V F+I +LA +P +GF + MI+ +A+ + G L +
Sbjct: 355 RKLGGLRKKMPITFVAFLIGALALAGVPPFAGFFSKDMILEAALAASHLSGGLLLLLALI 414
Query: 575 SAAYSLCLSKNIIF 588
A + S +IF
Sbjct: 415 GALLTAFYSFRLIF 428
Score = 99.3 bits (248), Expect = 3e-21
Identities = 85/327 (25%), Positives = 156/327 (47%), Gaps = 29/327 (8%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F + ++ +NLL +++ EL L +LI + + AA K F++ + +
Sbjct: 113 LFTGSMLGLVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGL 172
Query: 647 LYGISILYGITG-TLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
L GI +LY +TG TL + +F +I+ +L L LLL+++G K PFH W+PD
Sbjct: 173 LLGIILLYLLTGTTLLSEELFAAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPD 232
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
+G + + LL + T + ++ RL L L +++++ + ++ + A+
Sbjct: 233 AMEGPTPVSALLHAATMVKAGVYLLARLSP--LFALSPEALWLVILVGAVTALLAALIAL 290
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA----ILG 821
Q + KR++AYS+I+ +G M ++ + + ++ +F+++T+ F L
Sbjct: 291 VQNDIKRILAYSTISQLGYMFVAL---------GLGSLAYEAAIFHLVTHAFFKALLFLS 341
Query: 822 AFGVIILLKNNTCNKTDELDIFI--GLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFI 879
A VI T DI GL ++ P + +I +LAG PP GF++K I
Sbjct: 342 AGSVIH--------ATGTRDIRKLGGLRKKMPITFVAFLIGALALAGVPPFAGFFSKDMI 393
Query: 880 FEKIFET---QKIWLLLLIIMCSLIGA 903
E LLLL ++ +L+ A
Sbjct: 394 LEAALAASHLSGGLLLLLALIGALLTA 420
>gnl|CDD|236005 PRK07376, PRK07376, NAD(P)H-quinone oxidoreductase subunit F;
Validated.
Length = 673
Score = 294 bits (754), Expect = 3e-86
Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 69/311 (22%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRI---------------- 45
S NL Q+++ WE+VGM SYLL+GFWYD+ A A KAF++NR+
Sbjct: 141 SPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWAT 200
Query: 46 -----------------------------------GAMAKSAQFPLHTWLPDSMEGPTPA 70
G MAKSAQFPLH WLPD+MEGPTP
Sbjct: 201 GSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPI 260
Query: 71 SALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIA 130
SALIHAATMV AG+F++ RM P+FE +++I + GAITAF + + QNDIK+ +A
Sbjct: 261 SALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
Query: 131 YSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMK----HN----QD 182
YST+SQLGYM + +G AY+ +FHLMTHA+FKA+LFL +GS+I M+ H+ QD
Sbjct: 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQD 380
Query: 183 IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSL 242
+R MGGL KYMPIT IT LIG L++ G P F+GF+SKD +I F +L
Sbjct: 381 MRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKD--EILGAAFEAN-------PAL 431
Query: 243 WFIP-LTAFIT 252
WF+ LTA +T
Sbjct: 432 WFVGFLTAGMT 442
Score = 54.3 bits (131), Expect = 4e-07
Identities = 71/279 (25%), Positives = 136/279 (48%), Gaps = 36/279 (12%)
Query: 293 YIFFEATLIPIFIIIGTW----GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-S 347
Y+F+E + ++++G W G ++ AA K F+ +G +L+ ++ L++ +
Sbjct: 148 YVFWELVGMCSYLLVGFWYDRKGAAD---AAQKAFVVNRVGDFGLLLGILGLFWATGSFD 204
Query: 348 FNILS--WHQLSITKIEQIWLFITF----FIAFAIKIPIWPMHTWLPDAHVEAPTEGS-V 400
F+ ++ +L + WL + F+ K +P+H WLPDA +E PT S +
Sbjct: 205 FDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDA-MEGPTPISAL 263
Query: 401 ILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAY 460
I AA M+ G + + R P+F + + T ++ + + S IA+ Q DIKK +AY
Sbjct: 264 IHAATMVAAGVFLVARM-YPVFEQFPAVMTVIAWTGAITAFLGAS-IALTQNDIKKGLAY 321
Query: 461 SSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK---------- 510
S+I+ +G++ + M G + +++HA + +F+ G + + M+
Sbjct: 322 STISQLGYMVMA--MGCGAYSAG-LFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLA 378
Query: 511 --TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF 547
RL+ GG+ +P ++ F+I LA +P +GF
Sbjct: 379 QDMRLM---GGLRKYMPITAITFLIGCLAISGIPPFAGF 414
Score = 53.5 bits (129), Expect = 5e-07
Identities = 70/301 (23%), Positives = 141/301 (46%), Gaps = 30/301 (9%)
Query: 600 NLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGT 659
NL+ IY+ EL+ + +L+ + +++AA K F++ + +L GI L+ TG+
Sbjct: 143 NLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGS 202
Query: 660 LELQSI----FNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIIT 715
+ I ++ ++ + L +L+ +G K P H+W+PD +G + I
Sbjct: 203 FDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISA 262
Query: 716 LLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLI---IGNVSAITQYNFKR 772
L+ + T V L+ + P+ + ++ ++A I +G A+TQ + K+
Sbjct: 263 LIHAAT-----MVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKK 317
Query: 773 MIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF----AILGAFGVIIL 828
+AYS+I+ +G M+ ++ S +GLF+++T+ + LG+ VI
Sbjct: 318 GLAYSTISQLGYMVMAMGCGAYS-----------AGLFHLMTHAYFKAMLFLGSGSVIHG 366
Query: 829 LKNNTCNK---TDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
++ + ++ + GL + P A+ +I +++G PP GF++K I FE
Sbjct: 367 MEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE 426
Query: 886 T 886
Sbjct: 427 A 427
>gnl|CDD|238817 cd01639, IMPase, IMPase, inositol monophosphatase and related
domains. A family of Mg++ dependent phosphatases,
inhibited by lithium, many of which may act on inositol
monophosphate substrate. They dephosphorylate inositol
phosphate to generate inositol, which may be recycled
into inositol lipids; in eukaryotes IMPase plays a vital
role in intracellular signaling. IMPase is one of the
proposed targets of Li+ therapy in manic-depressive
illness. This family contains some bacterial members of
the inositol monophosphatase family classified as
SuhB-like. E. coli SuhB has been suggested to participate
in posstranscriptional control of gene expression, and
its inositol monophosphatase activity doesn't appear to
be sufficient for its cellular function. It has been
proposed, that SuhB plays a role in the biosynthesis of
phosphatidylinositol in mycobacteria.
Length = 244
Score = 274 bits (702), Expect = 2e-84
Identities = 103/242 (42%), Positives = 157/242 (64%), Gaps = 6/242 (2%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
AI+AARK+ I+ +L L EEK V ++KA EK+I +IL YP + F +
Sbjct: 5 AIEAARKAGEILLEAYEKL-GLNVEEKGSPVDLVTEVDKAVEKLIIEILKKAYPDHGF-L 62
Query: 984 KKSNYLTNFENENI-WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLF 1042
+ + + WIIDPLD TNF H FP + +SIAL K + V+YDPIRN+LF
Sbjct: 63 GEESGAAGGLTDEPTWIIDPLDGTTNFVHGFPHFAVSIALAVKGEPVVGVVYDPIRNELF 122
Query: 1043 TAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQ--IITKCKNLRN 1100
TA++G GA+LN +RIRV+ R ++ DAL+ T F + N + Y F + + +R
Sbjct: 123 TAVRGQGAFLNGRRIRVSGRKELKDALVATGFPYDRGDNFDRYLNNFAKLLAKAVRGVRR 182
Query: 1101 IGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVA 1160
+G+++L+LAYVA+G+LDG++E+GLKPW++AAG+L++ E+GG++++F G L +G+I+A
Sbjct: 183 LGSAALDLAYVAAGRLDGYWERGLKPWDVAAGALIVREAGGLVTDFDGGPFDLMSGNILA 242
Query: 1161 GN 1162
GN
Sbjct: 243 GN 244
>gnl|CDD|237137 PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4;
Provisional.
Length = 504
Score = 281 bits (722), Expect = 1e-83
Identities = 131/332 (39%), Positives = 202/332 (60%), Gaps = 1/332 (0%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
W+ + + LG+DGLS+ + L+ IT + I S + +K + L+L IG F
Sbjct: 45 WLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKPRLFYFLMLVLYSAQIGVF 104
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL-YYI 343
A D +LF++ +E L+P++++I WGG R YAA KF LYT + S+ +L++ + L
Sbjct: 105 LAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSG 164
Query: 344 SNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILA 403
+F++ S ++ L+ F IAF +K+PI+P+HTWLPDAH EA S+ILA
Sbjct: 165 DTFTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILA 224
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
++LK+G Y L+RF++ + PDA YF+ + L +++IIY +L A Q ++K+ +AYSS+
Sbjct: 225 GVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSV 284
Query: 464 AHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINV 523
+HMGFV LGI T + I GA++QMISH LI++A+F G Y + T I N GG+ V
Sbjct: 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKV 344
Query: 524 IPHFSVFFIIFSLANCSLPGTSGFIGEFMIIL 555
+P F S+A+ +LPG SGF+ E + L
Sbjct: 345 MPKTFALFTASSMASLALPGMSGFVSELTVFL 376
Score = 68.9 bits (169), Expect = 7e-12
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 45 IGAMAKSAQFPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALS- 102
I K FPLHTWLPD+ E P S +I A ++ G + + R + + L + +
Sbjct: 193 IAFGVKLPIFPLHTWLPDAHGEASAPVS-MILAGVLLKMGGYALIRFN-VQMLPDAHVYF 250
Query: 103 --IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTV-----SIFH 155
+ +G + + L Q+++KR +AYS++S +G+ V LG++A+T ++
Sbjct: 251 APALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGF--VLLGIAAFTDLGISGAMLQ 308
Query: 156 LMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSG 215
+++H A LF G H I NMGGL K MP T ++ + P SG
Sbjct: 309 MISHGLIAAALFFLTGV-TYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSG 367
Query: 216 FYSKDKKKIWIDYFNIYYFLGI---DGLSLWFIPLTAFITLI 254
F S+ + FLGI D S F +T + +
Sbjct: 368 FVSE-----------LTVFLGITSSDVYSSTFRTITILLAAV 398
Score = 62.0 bits (151), Expect = 1e-09
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 608 LELMSLTLCVLIASQKNNIFSSEAAIKYFI------LGILSSGFMLYGISILYGITGTLE 661
LEL+ + L + I + ++ AA K+ + + IL +G L L G T T
Sbjct: 118 LELVPVYLLISIWGGQKRLY---AATKFILYTALASIFILVAGLAL----ALSGDTFT-- 168
Query: 662 LQSIFNVIKLNNINCSVLALSLLL---IIVGLSFKLGISPFHMWVPDVYQGASIIITLLL 718
F++ +L + LAL LLL ++ KL I P H W+PD + AS ++++L
Sbjct: 169 ----FDLAELGAKSYP-LALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMIL 223
Query: 719 S-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYS 777
+ K+ + +I R ++ L + + L IL + ++I G ++A Q N KR +AYS
Sbjct: 224 AGVLLKMGGYALI-RFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYS 282
Query: 778 SIAHMGLMLFSIISI 792
S++HMG +L I +
Sbjct: 283 SVSHMGFVLLGIAAF 297
>gnl|CDD|223939 COG1007, NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N)
[Energy production and conversion].
Length = 475
Score = 280 bits (718), Expect = 2e-83
Identities = 140/392 (35%), Positives = 216/392 (55%), Gaps = 20/392 (5%)
Query: 522 NVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLC 581
+++ + +V ++ +LA+ G I+ A+ I VL ++ +
Sbjct: 33 SLLAYLAVLGLLAALASLLFIAYRGSAFAGAFIVDALALLMKIVVLLASLAALILSLPYL 92
Query: 582 LSKN----------IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEA 631
+ LG ++M S NNLL +++GLEL+SL L VL A ++++ SSEA
Sbjct: 93 ERAGTFKGEFYALLLFATLGMIVMASANNLLLLFIGLELLSLALYVLAALRRDSKRSSEA 152
Query: 632 AIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLS 691
A+KYF+LG LSS F+LYGI+++YG TG+L L I + L L L+ II GL
Sbjct: 153 ALKYFVLGALSSAFLLYGIALVYGATGSLSLSGIAAYLNGGGEP-LGLLLGLVFIIAGLG 211
Query: 692 FKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI 751
FKL PFHMW PDVY+GA +T LST PK++ F ++ R+ + P +W I I
Sbjct: 212 FKLSAVPFHMWTPDVYEGAPTPVTAFLSTAPKIAAFAVLLRIFVTAFGPDAPDWYLIFAI 271
Query: 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFY 811
+A+ S+++GN +A++Q N KR++AYSSIAHMG +L + ++ + LFY
Sbjct: 272 IAVASMLVGNFAALSQTNVKRLLAYSSIAHMGYLLVGLAAVTVGGYA--------AVLFY 323
Query: 812 IITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTI 871
++ Y F LGAFGV+ LL + + + GL +R+P A ++ I M SLAG PP
Sbjct: 324 LLAYAFMSLGAFGVVALLSSKE-GGAESISDLAGLSKRHPLLAALLTILMLSLAGIPPLA 382
Query: 872 GFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
GF+ KF++F + WL ++ ++ S I A
Sbjct: 383 GFWGKFYVFLAAVQAGLWWLAVIAVLNSAISA 414
Score = 118 bits (297), Expect = 9e-28
Identities = 81/361 (22%), Positives = 159/361 (44%), Gaps = 16/361 (4%)
Query: 224 IWIDYFNIYYF--LGIDGLSLWFIPLTAFITLIIILISLDIKKKL----AEYMSAFLILS 277
++I Y + +D L+L + +L +++SL ++ E+ + L +
Sbjct: 51 LFIAYRGSAFAGAFIVDALALLMKIVVLLASLAALILSLPYLERAGTFKGEFYALLLFAT 110
Query: 278 GLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLIS 336
+I A + +L +I E + ++++ S RS AA+K+F+ + S +L
Sbjct: 111 LGMIVMASANNLLLLFIGLELLSLALYVLAALRRDSKRSSEAALKYFVLGALSSAFLLYG 170
Query: 337 MIYLYYISNKSFNILSWHQLSITKIEQIWL---FITFFIAFAIKIPIWPMHTWLPDAHVE 393
+ L Y + S ++ E + L + K+ P H W PD +
Sbjct: 171 IA-LVYGATGSLSLSGIAAYLNGGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWTPDVYEG 229
Query: 394 APTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
APT + L+ LLR + F + + + +++ S++ + A+ Q +
Sbjct: 230 APTPVTAFLSTAPKIAAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASMLVGNFAALSQTN 289
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK-TR 512
+K+L+AYSSIAHMG++ +G+ +T + ++++A +S F + L ++
Sbjct: 290 VKRLLAYSSIAHMGYLLVGLAAVTVGGYAAVLFYLLAYAFMSLGAFGVVALLSSKEGGAE 349
Query: 513 LISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF----CIGVLT 568
IS+ G+ P + I L+ +P +GF G+F + L+AV+ I VL
Sbjct: 350 SISDLAGLSKRHPLLAALLTILMLSLAGIPPLAGFWGKFYVFLAAVQAGLWWLAVIAVLN 409
Query: 569 S 569
S
Sbjct: 410 S 410
Score = 83.1 bits (206), Expect = 2e-16
Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 53/271 (19%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGA------------- 47
+NNL LF+G E++ +A Y+L D + A LK F++ + +
Sbjct: 118 SANNLLLLFIGLELLSLALYVLAALRRDSKRSSEAALKYFVLGALSSAFLLYGIALVYGA 177
Query: 48 ---------------------------------MAKSAQFPLHTWLPDSMEG-PTPASAL 73
K + P H W PD EG PTP +A
Sbjct: 178 TGSLSLSGIAAYLNGGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWTPDVYEGAPTPVTAF 237
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTA--LSIILFIGAITAFFMGLLGIIQNDIKRIIAY 131
+ A + A ++ R+ + I I + + Q ++KR++AY
Sbjct: 238 LSTAPKI-AAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASMLVGNFAALSQTNVKRLLAY 296
Query: 132 STLSQLGYMTVGL---GVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGG 188
S+++ +GY+ VGL V Y +F+L+ +AF F + + I ++ G
Sbjct: 297 SSIAHMGYLLVGLAAVTVGGYAAVLFYLLAYAFMSLGAFGVVALLSSKEGGAESISDLAG 356
Query: 189 LYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
L K P+ I +LSL G P +GF+ K
Sbjct: 357 LSKRHPLLAALLTILMLSLAGIPPLAGFWGK 387
>gnl|CDD|235810 PRK06473, PRK06473, NAD(P)H-quinone oxidoreductase subunit D4;
Validated.
Length = 500
Score = 271 bits (695), Expect = 5e-80
Identities = 137/335 (40%), Positives = 209/335 (62%), Gaps = 8/335 (2%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
WID + Y LG+DGLSL + L + +TLI I S + ++ Y S L+L+ + GAF
Sbjct: 65 WIDSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAF 124
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLIS---MIYLY 341
A D +LF++F+E LIP++++I WGG R YAA KF LYT + +L+L+S +++L
Sbjct: 125 LAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLS 184
Query: 342 YISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401
S+ + L H L ++ Q+ L + F IKIP+ P HTWLPDAHVEA T SV+
Sbjct: 185 GASSFDYEPLRSHTLPLST--QLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVL 242
Query: 402 LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461
LA ++LKLG YGLLRF + +FP+A Y + + T +++S++Y + A+ Q D+KK++AYS
Sbjct: 243 LAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYS 302
Query: 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII 521
SI HMG++ L T +SI A+ QMISH LIS+ +F+ +G +Y + +R + G++
Sbjct: 303 SIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLL 362
Query: 522 NV---IPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
N +P I+ +A+ +PG GFI EF++
Sbjct: 363 NPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
Score = 74.4 bits (183), Expect = 1e-13
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 30/307 (9%)
Query: 600 NLLSIYLGLELMSLTLCVLIA---SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGI 656
+LL +L EL + L +LIA Q+ AA K+ + +S GI IL
Sbjct: 128 DLLLFFLFYELELIPLYLLIAIWGGQRRGY----AATKFLLYTAIS------GILILVSF 177
Query: 657 TGTLELQSI----FNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASI 712
G + L + ++ + + S L L I+VG K+ + PFH W+PD + AS
Sbjct: 178 LGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEAST 237
Query: 713 IITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKI---LLILAIFSLIIGNVSAITQYN 769
+++LL+ + L + Y LL + W + L A+ S++ G AI Q +
Sbjct: 238 PVSVLLA---GVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKD 294
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
K+M+AYSSI HMG +L + + +F GL I +F ++G ++
Sbjct: 295 MKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGL--ISALLFLLVG-----VVY 347
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI 889
K D L + + P +M++ + + AG P +GF A+F +F F +
Sbjct: 348 KKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPV 407
Query: 890 WLLLLII 896
LL +I
Sbjct: 408 QTLLCMI 414
Score = 62.4 bits (152), Expect = 7e-10
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 45 IGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITR--MSPLFELSNTAL 101
+G K P HTWLPD+ +E TP S L+ A ++ G + + R + E
Sbjct: 213 VGFGIKIPLVPFHTWLPDAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLA 271
Query: 102 SIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMT 158
+ ++ + I Q D+K+++AYS++ +GY+ + + + ++F +++
Sbjct: 272 PWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMIS 331
Query: 159 HAFFKALLFLSAGSIIINMKHNQDIRNMGGLY---KYMPITCITSLIGLLSLVGAPFFSG 215
H ALLFL G ++ ++D+ + GL + +PIT ++G+++ G P G
Sbjct: 332 HGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVG 390
Query: 216 FYSK 219
F ++
Sbjct: 391 FIAE 394
>gnl|CDD|177253 MTH00210, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 616
Score = 273 bits (699), Expect = 2e-79
Identities = 138/265 (52%), Positives = 169/265 (63%), Gaps = 46/265 (17%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR----------------- 44
S+N QLF+GWE VG+ SYLLI FW + A A +KA LINR
Sbjct: 130 SDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEF 189
Query: 45 -----------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASALIH 75
IGA+ KSAQ LHTWLPD+MEGPTP SALIH
Sbjct: 190 GTLEFSTISSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIH 249
Query: 76 AATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLS 135
AATMVTAG+F+I R PLFE S AL+I+ +GA+TAFF +G++QND+K++IAYST S
Sbjct: 250 AATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCS 309
Query: 136 QLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPI 195
QLGYM + G+S Y+ S+FHLM HAFFKALLFLSAGS+I + QD+R MGGL K +P
Sbjct: 310 QLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPF 369
Query: 196 TCITSLIGLLSLVGAPFFSGFYSKD 220
T + LIG LSL+G P+ +GFYSKD
Sbjct: 370 TYVMILIGSLSLMGFPYLTGFYSKD 394
Score = 51.2 bits (123), Expect = 3e-06
Identities = 70/243 (28%), Positives = 126/243 (51%), Gaps = 28/243 (11%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLY-YISNKSFNILSWHQLSITKIEQIWLFITFFIAF-- 374
AAIK L +G + ++++MI + F+ +S L +T I + L I + F
Sbjct: 163 AAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTIS--SLLVTNINKESLTIICLLLFIG 220
Query: 375 AI-KIPIWPMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNL 432
A+ K +HTWLPDA +E PT S +I AA M+ G + ++R S P+F +
Sbjct: 221 AVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLIIR-SGPLFEGSP------ 272
Query: 433 IITLSLISII------YISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKIS-IQGAI 485
+ L++++I+ + + + +VQ D+KK+IAYS+ + +G++ M+ IS ++
Sbjct: 273 -LALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV----MVCGISNYSTSL 327
Query: 486 IQMISHALISSAMFISIGFLYNQMKTRL-ISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544
+++HA + +F+S G + + + + GG+I IP V +I SL+ P
Sbjct: 328 FHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYL 387
Query: 545 SGF 547
+GF
Sbjct: 388 TGF 390
Score = 46.5 bits (111), Expect = 8e-05
Identities = 81/304 (26%), Positives = 148/304 (48%), Gaps = 37/304 (12%)
Query: 593 MIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISI 652
+++++ +N + +++G E + L +LI I +++AAIK ++ + ++ + +
Sbjct: 125 IVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIM 184
Query: 653 LYGITGTLELQSIFNVIKLNNINCSVLALSLLLII--VGLSFKLGISPFHMWVPDVYQGA 710
+ GTLE +I +++ N S+ + LLL I VG S +LG+ H W+PD +G
Sbjct: 185 ILKEFGTLEFSTISSLLVTNINKESLTIICLLLFIGAVGKSAQLGL---HTWLPDAMEGP 241
Query: 711 SIIITLL-LSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLIL-AIFSLIIGNVSAITQY 768
+ + L+ +T +F+II + PL + IL L A F+ +G V Q
Sbjct: 242 TPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVV----QN 297
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDS-GLFYIITYIF----AILGAF 823
+ K++IAYS+ + +G M+ ++ S S LF+++ + F L A
Sbjct: 298 DLKKVIAYSTCSQLGYMV------------MVCGISNYSTSLFHLMNHAFFKALLFLSAG 345
Query: 824 GVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
VI + DE D+ GL + P+ ++++I SL GFP GFY+K I E
Sbjct: 346 SVIHAVS-------DEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILE 398
Query: 882 KIFE 885
++
Sbjct: 399 LTYD 402
>gnl|CDD|214400 MTH00020, ND5, NADH dehydrogenase subunit 5; Reviewed.
Length = 610
Score = 269 bits (690), Expect = 3e-78
Identities = 167/400 (41%), Positives = 224/400 (56%), Gaps = 63/400 (15%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR----------------- 44
S+N QLF+GWE VG+ SYLLI FW + A A +KA L+NR
Sbjct: 130 SDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
Query: 45 ----------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASALIHA 76
IGA+ KSAQ LHTWLPD+MEGPTP SALIHA
Sbjct: 190 GSLDFSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHA 249
Query: 77 ATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQ 136
ATMVTAG+F++ R SPLFE + AL I+ +G++T FF +G++QND+K++IAYST SQ
Sbjct: 250 ATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQ 309
Query: 137 LGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPIT 196
LGYM V G+S Y++S+FHLM HAFFKALLFLSAGS+I + QD+R MGGL ++P+T
Sbjct: 310 LGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLT 369
Query: 197 CITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIII 256
I LIG LSL+G P+ +GFYSKD I F YY + L + LTAF ++ +I
Sbjct: 370 YIFFLIGSLSLMGFPYLTGFYSKD--LILELAFGQYYLIFAYWLGCFSALLTAFYSIRLI 427
Query: 257 LISL--DIKKKLAEYMSA----FLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310
++ + K A + + +L L I A G +F + +I F I
Sbjct: 428 YLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILAL----GSIFVGYLAKEMIWSFQI---- 479
Query: 311 GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNI 350
+IK L + SL + +I LY+ S+K+F +
Sbjct: 480 TLPPIVPLSIK--LLPVFLSLGGIGLVIILYFYSSKTFRV 517
Score = 70.9 bits (174), Expect = 2e-12
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 19/274 (6%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYIS-----NKSFNILSWHQLSITKIEQIWLFITFFI 372
AAIK L +G + +L++M L+ + FN++ S I I LF+ FI
Sbjct: 163 AAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSS--DITLICLFL--FI 218
Query: 373 AFAIKIPIWPMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIFPDASYYFSN 431
K +HTWLPDA +E PT S +I AA M+ G + L+R S P+F A
Sbjct: 219 GAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLLIRSS-PLFEQAPLALII 276
Query: 432 LIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISH 491
+ I SL + + +VQ D+KK+IAYS+ + +G++ + L+ SI ++ +++H
Sbjct: 277 VTIVGSLTVFF-AATVGLVQNDLKKVIAYSTCSQLGYMVV-ACGLSHYSI--SLFHLMNH 332
Query: 492 ALISSAMFISIGFLYNQM-KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGE 550
A + +F+S G + + + + + GG+I+ +P +FF+I SL+ P +GF +
Sbjct: 333 AFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSK 392
Query: 551 FMIILSAVKFNFCIGV--LTSTALIFSAAYSLCL 582
+I+ A + I L + + +A YS+ L
Sbjct: 393 DLILELAFGQYYLIFAYWLGCFSALLTAFYSIRL 426
Score = 70.5 bits (173), Expect = 3e-12
Identities = 81/308 (26%), Positives = 142/308 (46%), Gaps = 34/308 (11%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F +++++ +N L +++G E + L +LI I +++AAIK ++ + +
Sbjct: 119 LFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGL 178
Query: 647 LYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLI-IVGLSFKLGISPFHMWVPD 705
L + +L+ G+L+ S+FN++ + L L I VG S +LG H W+PD
Sbjct: 179 LLAMFLLWDRFGSLDFSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLG---LHTWLPD 235
Query: 706 VYQGASIIITLL-LSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLIL-AIFSLIIGNVS 763
+G + + L+ +T +F++I + PL + I+ L F+ +G V
Sbjct: 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLV- 294
Query: 764 AITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF----AI 819
Q + K++IAYS+ + +G M +++ SH LF+++ + F
Sbjct: 295 ---QNDLKKVIAYSTCSQLGYM---VVACGLSH--------YSISLFHLMNHAFFKALLF 340
Query: 820 LGAFGVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKF 877
L A VI L +DE D+ GL P + +I SL GFP GFY+K
Sbjct: 341 LSAGSVIHAL-------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKD 393
Query: 878 FIFEKIFE 885
I E F
Sbjct: 394 LILELAFG 401
>gnl|CDD|233565 TIGR01770, NDH_I_N, proton-translocating NADH-quinone
oxidoreductase, chain N. This model describes the 14th
(based on E. coli) structural gene, N, of bacterial and
chloroplast energy-transducing NADH (or NADPH)
dehydrogenases. This model does not describe any subunit
of the mitochondrial complex I (for which the subunit
composition is very different), nor NADH dehydrogenases
that are not coupled to ion transport. The Enzyme
Commission designation 1.6.5.3, for NADH dehydrogenase
(ubiquinone), is applied broadly, perhaps unfortunately,
even if the quinone is menaquinone (Thermus,
Mycobacterium) or plastoquinone (chloroplast). For
chloroplast members, the name NADH-plastoquinone
oxidoreductase is used for the complex and this protein
is designated as subunit 2 or B. This model also
includes a subunit of a related complex in the archaeal
methanogen, Methanosarcina mazei, in which F420H2
replaces NADH and 2-hydroxyphenazine replaces the
quinone [Energy metabolism, Electron transport].
Length = 468
Score = 264 bits (677), Expect = 5e-78
Identities = 152/430 (35%), Positives = 234/430 (54%), Gaps = 24/430 (5%)
Query: 484 AIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPG 543
AI+ I L + + + F + + L+ I ++ F+ A+ G
Sbjct: 3 AILPEIILLLGAFILLLYGLFYSRKKRNPLLLKNLFYIVLLSLLVSLFLTLQYASYLFFG 62
Query: 544 TSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNI----------IFVLGQM 593
S FI + ++ + +L ST L+F A S + I +LG
Sbjct: 63 FSFFIVDNFSLIIK------LILLLSTLLLFFFALSYFSKEKINKFEFYILLLFALLGIF 116
Query: 594 IMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISIL 653
+++S N+LLSIYLGLEL SL VL A ++ + FS+EA +KYFILG SSG +L+GIS++
Sbjct: 117 LLVSSNDLLSIYLGLELQSLCFYVLAALKRKSRFSTEAGLKYFILGAFSSGLLLFGISLI 176
Query: 654 YGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASII 713
YG TG+L + + + + S+L L ++ I+VGL FKL PFHMWVPDVY+GA
Sbjct: 177 YGFTGSLNFEDLLLFLSNLGNDISLLLLGIVFILVGLLFKLSAVPFHMWVPDVYEGAPTP 236
Query: 714 ITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRM 773
+T S PK+++F ++ RL L WQ LLI A+ S++IGN A+ Q KR+
Sbjct: 237 VTAFFSIVPKIAIFAVLLRLFGYILFAFSPIWQIFLLICAVLSMLIGNFGALAQKKVKRL 296
Query: 774 IAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNT 833
+AYSSI+H+G +L +++ + LFYI Y +GAFGV+ LL++
Sbjct: 297 LAYSSISHVGYILIGLLAGT--------LEGIKAVLFYIFIYALMSIGAFGVLALLRSRK 348
Query: 834 CNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLL 893
+ + F GL + NP A++++IFMFSLAG PP GF+ KF++F + ++ L +
Sbjct: 349 DEWIEYISDFAGLFKTNPLIAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYLLAV 408
Query: 894 LIIMCSLIGA 903
+ I+ S+I A
Sbjct: 409 IAILTSVISA 418
Score = 101 bits (253), Expect = 3e-22
Identities = 85/377 (22%), Positives = 164/377 (43%), Gaps = 23/377 (6%)
Query: 229 FNIYYFLGIDGLSLW---FIPLTAFITLIIILISLDIKKKLA---EYMSAFLILSGLIIG 282
F + F +D SL + L+ + L +K + F +L ++
Sbjct: 60 FFGFSFFIVDNFSLIIKLILLLSTLLLFFFALSYFSKEKINKFEFYILLLFALLGIFLLV 119
Query: 283 AFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGS--LLMLISMIY 339
+ + D + Y+ E + +++ S S A +K+F+ S LL IS+IY
Sbjct: 120 S--SNDLLSIYLGLELQSLCFYVLAALKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIY 177
Query: 340 LYYISNKSFNILSWHQLSITKIEQIWLF--ITFFIAFAIKIPIWPMHTWLPDAHVEAPTE 397
+ + +F L ++ + L + + K+ P H W+PD + APT
Sbjct: 178 GF-TGSLNFEDLLLFLSNLGNDISLLLLGIVFILVGLLFKLSAVPFHMWVPDVYEGAPTP 236
Query: 398 GSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKL 457
+ + + LLR I S + ++ +++S++ + A+ Q +K+L
Sbjct: 237 VTAFFSIVPKIAIFAVLLRLFGYILFAFSPIWQIFLLICAVLSMLIGNFGALAQKKVKRL 296
Query: 458 IAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL--IS 515
+AYSSI+H+G++ +G+ T I+ + + +AL+S F + L ++ + IS
Sbjct: 297 LAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSIGAFGVLALLRSRKDEWIEYIS 356
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF----CIGVLTSTA 571
+F G+ P ++ +IF + +P +GF G+F + + +K I +LTS
Sbjct: 357 DFAGLFKTNPLIAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYLLAVIAILTSVI 416
Query: 572 LIFSAAYSLCLSKNIIF 588
SA Y L + K + F
Sbjct: 417 ---SAFYYLRVVKVMYF 430
Score = 68.8 bits (169), Expect = 8e-12
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEG-PTPASALIHAATMVTA-GIFMITRMSPLFELSNTALS 102
+G + K + P H W+PD EG PTP +A + + + LF S
Sbjct: 211 VGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVLLRLFGYILFAFSPIWQI 270
Query: 103 IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFF 162
+L ++ + Q +KR++AYS++S +GY+ +GL I ++ + F
Sbjct: 271 FLLICAVLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL-EGIKAVLFYIFI 329
Query: 163 KALLFLSAGSIIINMKHNQD-----IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFY 217
AL+ + A ++ ++ +D I + GL+K P+ I LI + SL G P +GF+
Sbjct: 330 YALMSIGAFGVLALLRSRKDEWIEYISDFAGLFKTNPLIAILILIFMFSLAGIPPLAGFF 389
Query: 218 SK 219
K
Sbjct: 390 GK 391
>gnl|CDD|214398 MTH00004, ND5, NADH dehydrogenase subunit 5; Validated.
Length = 602
Score = 264 bits (677), Expect = 2e-76
Identities = 127/261 (48%), Positives = 164/261 (62%), Gaps = 44/261 (16%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
+NN+FQLF+GWE VG+ S+LLIG+W + A TA L+A + NRIG
Sbjct: 134 ANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTL 193
Query: 47 -------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVT 81
A KSAQF LH WLP +MEGPTP SAL+H++TMV
Sbjct: 194 NTWEIQQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVV 253
Query: 82 AGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMT 141
AGIF++ R PL + + TAL+I L +GA+T F + QNDIK+IIA+ST SQLG M
Sbjct: 254 AGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMM 313
Query: 142 VGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPIT--CIT 199
V +G++ ++ H+ THAFFKA+LFL +GSII N+ + QDIR MGGL K +PIT C+T
Sbjct: 314 VTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLT 373
Query: 200 SLIGLLSLVGAPFFSGFYSKD 220
IG L+L+G PF SGFYSKD
Sbjct: 374 --IGNLALMGTPFLSGFYSKD 392
Score = 52.1 bits (126), Expect = 1e-06
Identities = 113/422 (26%), Positives = 188/422 (44%), Gaps = 58/422 (13%)
Query: 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISL-----DIK-KKLAEYMSAFLILSGLIIG 282
FNI +D SL F+P+ F+T I+ S D K +Y+ FLI ++I
Sbjct: 74 FNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILI- 132
Query: 283 AFCALDGMLFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLY 341
A + +I +E I F++IG W G + + AA++ +Y +G + +++SM +L
Sbjct: 133 --TANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLA 190
Query: 342 YISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401
N ++ I QL + +A K + +H WLP A +E PT S +
Sbjct: 191 MTLN-TWEI---QQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVSAL 245
Query: 402 L-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSL----ISIIYISLIAMVQIDIKK 456
L ++ M+ G + L+R P+ + +T+ L ++ ++ + A+ Q DIKK
Sbjct: 246 LHSSTMVVAGIFLLIRTH-PLL-----QNNQTALTICLCLGALTTLFAATCALTQNDIKK 299
Query: 457 LIAYSSIAHMGFVTLGIFMLTKISI---QGAIIQMISHALISSAMFISIG-FLYNQMKTR 512
+IA+S+ + +G M+ I + Q A + + +HA + +F+ G ++N +
Sbjct: 300 IIAFSTSSQLG------LMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQ 353
Query: 513 LISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII--LSAVKFNFCIGVLTST 570
I GG+ +P S I +LA P SGF + II L+ N +LT
Sbjct: 354 DIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLL 413
Query: 571 ALIFSAAYSLCLSKNIIFVL------GQMIMISGNN-----------LLSIYLGLELMSL 613
A F+AAYSL + I+ V I+ N L SI GL + S
Sbjct: 414 ATSFTAAYSLRM---ILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISST 470
Query: 614 TL 615
L
Sbjct: 471 IL 472
Score = 29.7 bits (68), Expect = 9.8
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 657 TGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL 716
T E+Q +F ++ L L+L G S + G H W+P +G + + L
Sbjct: 193 LNTWEIQQLF----SPTQTPTLPLLGLILAATGKSAQFG---LHPWLPAAMEGPTPVSAL 245
Query: 717 LLSTTPKLSLFVI--IYRLLIKCLLPLVINWQKIL---LILAIFSLIIGNVSAITQYNFK 771
L S+T V+ I+ LLI+ PL+ N Q L L L + + A+TQ + K
Sbjct: 246 LHSST-----MVVAGIF-LLIR-THPLLQNNQTALTICLCLGALTTLFAATCALTQNDIK 298
Query: 772 RMIAYSSIAHMGLMLFSI 789
++IA+S+ + +GLM+ +I
Sbjct: 299 KIIAFSTSSQLGLMMVTI 316
>gnl|CDD|214338 CHL00025, ndhF, NADH dehydrogenase subunit 5.
Length = 741
Score = 262 bits (673), Expect = 1e-74
Identities = 127/278 (45%), Positives = 165/278 (59%), Gaps = 59/278 (21%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
S+NL Q+++ WE+VGM SYLLIGFW+ +P+A A KAF+ NR+G
Sbjct: 141 SSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIT 200
Query: 47 ------------------------------------AMAKSAQFPLHTWLPDSMEGPTPA 70
+AKSAQFPLH WLPD+MEGPTP
Sbjct: 201 GSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPI 260
Query: 71 SALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIA 130
SALIHAATMV AGIF++ R+ PLF + +++I IG ITA L + Q DIKR +A
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
Query: 131 YSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINM--------KHNQD 182
YST+SQLGYM + LG+ +Y ++FHL+THA+ KALLFL +GS+I +M +Q+
Sbjct: 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQN 380
Query: 183 IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
+ MGGL KYMPIT T L+G LSL G P + F+SKD
Sbjct: 381 MVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKD 418
Score = 48.0 bits (115), Expect = 3e-05
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 13/115 (11%)
Query: 382 PMHTWLPDAHVEAPTEGS-VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
P+H WLPDA +E PT S +I AA M+ G + + R LP+F Y NLI SLI
Sbjct: 245 PLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARL-LPLF-IVIPYIMNLI---SLIG 298
Query: 441 IIYISL---IAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHA 492
II L +A+ Q DIK+ +AYS+++ +G++ L + + S + A+ +I+HA
Sbjct: 299 IITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIG---SYRAALFHLITHA 350
Score = 41.8 bits (99), Expect = 0.002
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 647 LYGISILYGITGTLELQSIF----NVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMW 702
L GI Y ITG+ E + +F N+I N +N L L+ +G K P H+W
Sbjct: 190 LLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVW 249
Query: 703 VPDVYQGASIIITLLLSTTPKLSLFVIIYRLL-IKCLLPLVINWQKILLILAIFSLIIGN 761
+PD +G + I L+ + T + ++ RLL + ++P ++N I LI I + ++G
Sbjct: 250 LPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNL--ISLIGII-TALLGA 306
Query: 762 VSAITQYNFKRMIAYSSIAHMGLM 785
A+ Q + KR +AYS+++ +G M
Sbjct: 307 TLALAQKDIKRGLAYSTMSQLGYM 330
>gnl|CDD|177170 MTH00108, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 602
Score = 255 bits (654), Expect = 3e-73
Identities = 124/260 (47%), Positives = 162/260 (62%), Gaps = 41/260 (15%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG------AMA------ 49
+NNLFQLF+GWE VG+ S+LLIG+WY + A TA L+A L NRIG AMA
Sbjct: 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNL 193
Query: 50 -----------------------------KSAQFPLHTWLPDSMEGPTPASALIHAATMV 80
KSAQF LH WLP +MEGPTP SAL+H++TMV
Sbjct: 194 NSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 253
Query: 81 TAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYM 140
AG+F++ R PL E + T ++ L +GAIT F + + QNDIK+I+A+ST SQLG M
Sbjct: 254 VAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLM 313
Query: 141 TVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITS 200
V +G++ ++ H+ THAFFKA+LF+ +GSII N+ QDIR MGGL+K +P T
Sbjct: 314 MVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTAL 373
Query: 201 LIGLLSLVGAPFFSGFYSKD 220
+IG L+L G PF +GFYSKD
Sbjct: 374 IIGSLALTGMPFLTGFYSKD 393
Score = 40.2 bits (95), Expect = 0.007
Identities = 92/324 (28%), Positives = 156/324 (48%), Gaps = 47/324 (14%)
Query: 304 FIIIGTW-GGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSW--HQLSITK 360
F++IG W G ++ + AA++ LY +G + +++M + N SW Q+ +
Sbjct: 152 FLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLN------SWDLQQIFMLN 205
Query: 361 IEQIWL-FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFS 418
L + +A K + +H WLP A +E PT S +L ++ M+ G + L+RF
Sbjct: 206 PNNSNLPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGVFLLIRFH 264
Query: 419 LPIFPDASYYFSNLIITLSL----ISIIYISLIAMVQIDIKKLIAYSSIAHMGF--VTLG 472
P+ + + I TL+L I+ ++ ++ A+ Q DIKK++A+S+ + +G VT+G
Sbjct: 265 -PLMEN-----NKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIG 318
Query: 473 I---FMLTKISIQGAIIQMISHALISSAMFISIG-FLYNQMKTRLISNFGGIINVIPHFS 528
I + A + + +HA + +F+ G ++N + I GG+ +P S
Sbjct: 319 INQPHL--------AFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTS 370
Query: 529 VFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTST--ALIFSAAYSLCLSKNI 586
II SLA +P +GF + +II +A L T A +AAYS + I
Sbjct: 371 TALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRI---I 427
Query: 587 IFVL-GQ-----MIMISGNNLLSI 604
F L GQ +I I+ NN L I
Sbjct: 428 FFALLGQPRFPPLITINENNPLLI 451
>gnl|CDD|214428 MTH00137, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 611
Score = 255 bits (653), Expect = 4e-73
Identities = 124/262 (47%), Positives = 163/262 (62%), Gaps = 46/262 (17%)
Query: 3 NNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG------AMA------- 49
NN+FQLF+GWE VG+ S+LLIG+WY + A TA L+A + NR+G AMA
Sbjct: 139 NNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLN 198
Query: 50 -----------------------------KSAQFPLHTWLPDSMEGPTPASALIHAATMV 80
KSAQF LH WLP +MEGPTP SAL+H++TMV
Sbjct: 199 SWEIQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
Query: 81 TAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYM 140
AGIF++ R+SPL E + TAL+ L +GA+T F + QNDIK+I+A+ST SQLG M
Sbjct: 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLM 318
Query: 141 TVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPIT--CI 198
V +G++ ++ H+ THAFFKA+LFL +GSII ++ QDIR MGGL+ P T C+
Sbjct: 319 MVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCL 378
Query: 199 TSLIGLLSLVGAPFFSGFYSKD 220
T IG L+L G PF +GF+SKD
Sbjct: 379 T--IGSLALTGTPFLAGFFSKD 398
Score = 30.6 bits (70), Expect = 5.3
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 36/215 (16%)
Query: 383 MHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSL--- 438
+H WLP A +E PT S +L ++ M+ G + L+R S P+ + + +T L
Sbjct: 234 LHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRLS-PLMEN-----NQTALTTCLCLG 286
Query: 439 -ISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISI---QGAIIQMISHALI 494
++ ++ + A+ Q DIKK++A+S+ + LG+ M+T I + Q A + + +HA
Sbjct: 287 ALTTLFTATCALTQNDIKKIVAFSTSSQ-----LGLMMVT-IGLNQPQLAFLHICTHAFF 340
Query: 495 SSAMFIS----IGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT---SGF 547
+ +F+ I L ++ R GG+ ++ P S I SLA L GT +GF
Sbjct: 341 KAMLFLCSGSIIHSLNDEQDIR---KMGGLHHLTPFTSSCLTIGSLA---LTGTPFLAGF 394
Query: 548 IGEFMII--LSAVKFNFCIGVLTSTALIFSAAYSL 580
+ II L+ N LT A F+A YSL
Sbjct: 395 FSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSL 429
>gnl|CDD|214443 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 445
Score = 250 bits (640), Expect = 4e-73
Identities = 128/373 (34%), Positives = 206/373 (55%), Gaps = 9/373 (2%)
Query: 212 FFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKK---LAE 268
F F + + NI YF G+D LS I L+ +I +++IL S + KK
Sbjct: 29 FLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNL 88
Query: 269 YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSN-RSYAAIKFFLYTL 327
++ L L ++ F +++ +LFYIFFE++LIP +I WG R A I YTL
Sbjct: 89 FLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTL 148
Query: 328 MGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWL 387
SL +L+ + YLY + LS+ L+ +++ +AF +K+P++ +H WL
Sbjct: 149 FASLPLLVGIFYLY----NNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWL 204
Query: 388 PDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLI 447
P AHVEAP GS+ILA ++LKLG YGLLR + F F+ + I++SL+ + +SLI
Sbjct: 205 PKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKFNYIWISISLVGGVIVSLI 263
Query: 448 AMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYN 507
+ Q+D+K LIAYSS+AHMG V G+ + + G+++ MI H L SS +F +Y
Sbjct: 264 CLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYE 323
Query: 508 QMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVL 567
++ +R + G++N +P S+++ + S +N + P + +GE +I S + ++ +
Sbjct: 324 RLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIF 383
Query: 568 TSTALIFSAAYSL 580
FSAAYSL
Sbjct: 384 LMLLSFFSAAYSL 396
Score = 42.4 bits (101), Expect = 0.001
Identities = 75/338 (22%), Positives = 136/338 (40%), Gaps = 34/338 (10%)
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF------IGEF 551
M + L + + N ++ + F + + + +
Sbjct: 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFG 60
Query: 552 MIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMI--SGNNLLSIYLGLE 609
+I+LS F C+ ++ S+ ++ L +I L +++ S NLL Y+ E
Sbjct: 61 LILLS---FWICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFE 117
Query: 610 LMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669
+ LI +A I + +S +L GI LY +G+L
Sbjct: 118 SSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSL-------SF 170
Query: 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDV-----YQGASIIITLLLSTTPKL 724
L N S+ L L +I+ K+ + H+W+P G+ I+ +LL KL
Sbjct: 171 FLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLL----KL 226
Query: 725 SLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGL 784
+ ++ + L L N+ I + +++ +I ++ + Q + K +IAYSS+AHMGL
Sbjct: 227 GGYGLLRVMSFFSKLGLKFNY--IWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGL 284
Query: 785 ML-----FSIISIKTSHNNLIIFNSCDSGLFYIITYIF 817
+L FS + S +I C SGLF + I+
Sbjct: 285 VLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIY 322
Score = 35.9 bits (84), Expect = 0.14
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 54 FPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILF-IGAIT 111
F +H WLP + +E P S +I A ++ G + + R+ F + I I +
Sbjct: 198 FFVHLWLPKAHVEAPVSGS-MILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIWISISLVG 256
Query: 112 AFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL 144
+ L+ + Q D+K +IAYS+++ +G + GL
Sbjct: 257 GVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
>gnl|CDD|214466 MTH00226, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 505
Score = 251 bits (643), Expect = 6e-73
Identities = 147/357 (41%), Positives = 219/357 (61%), Gaps = 3/357 (0%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDIKKKLAE-YMSAFLILSGLIIGAFCALDGMLFY 293
+DG+S++FI LT FI ILIS K L + ++ LIL L+ F LD +FY
Sbjct: 98 FAVDGISIYFIILTGFIVPCSILISWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFY 157
Query: 294 IFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKS-FNIL 351
I FE LIP+++I+G WG + AA FF YTL+GS+LML+ + LY I + + L
Sbjct: 158 ILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL 217
Query: 352 SWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGC 411
+ +++ Q W+F+ F+A A+KIPI+P H WLP AHVEAP GSV+LA I+LKLG
Sbjct: 218 ASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGG 277
Query: 412 YGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTL 471
YGL+R S PI P + + +I + ++ I+Y S QID+K+L+AYSS+AHMG V++
Sbjct: 278 YGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
Query: 472 GIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFF 531
+ I + G+I M++H ++SS +FI + LY++ TRLI + G+ +P +
Sbjct: 338 TLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIM 397
Query: 532 IIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
I+ SLAN ++P + FIGE++ ILS+ +N IGV + +I SA YS + + F
Sbjct: 398 IVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTF 454
Score = 56.9 bits (137), Expect = 4e-08
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 47 AMA-KSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMS-PLFELSNTALSI 103
AMA K FP H WLP + +E P S L+ A ++ G + + R+S P+ L L+
Sbjct: 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLL-AGILLKLGGYGLVRLSWPILPLGAQNLAP 297
Query: 104 ILFIGAITAFFMGLLGII-QNDIKRIIAYSTLSQLGYMTVGL---GVSAYTVSIFHLMTH 159
+ I G Q D+KR++AYS+++ +G +++ L + T SIF ++ H
Sbjct: 298 AVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAH 357
Query: 160 AFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGF 216
+LLF+ +I+ + H + I+ GL MPI ++ L+ V P F
Sbjct: 358 GIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
Score = 50.7 bits (121), Expect = 4e-06
Identities = 44/165 (26%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 630 EAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLL-IIV 688
+AA +F ++ S ML + LY I GT + + +++ + L I +
Sbjct: 182 QAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDY---LTLASCSHVVSEQTQKWIFLGIFL 238
Query: 689 GLSFKLGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVIIYRLLIKCLLPL-VINWQ 746
++ K+ I PFH+W+P + A + ++LL+ KL + ++ L +LPL N
Sbjct: 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVR--LSWPILPLGAQNLA 296
Query: 747 KILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
++ + I ++ G+ + Q + KR++AYSS+AHMGL+ ++++
Sbjct: 297 PAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVT 341
>gnl|CDD|176954 CHL00011, ndhD, NADH dehydrogenase subunit 4.
Length = 498
Score = 251 bits (643), Expect = 7e-73
Identities = 140/384 (36%), Positives = 218/384 (56%), Gaps = 22/384 (5%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
WI++F+ ++ LGIDGLS+ I LT FIT + L + + + + L + IG F
Sbjct: 70 WINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLF 129
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGS--LLMLISMIYLYY 342
+ D +LF+I +E LIP+++++ WGG R Y+A KF LYT GS LL+ + + LY
Sbjct: 130 SSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLIGVLGMGLYG 189
Query: 343 ISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL 402
+ + N + S +I +I F IA+A+K+PI P+HTWLPD H EA ++L
Sbjct: 190 SNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLL 249
Query: 403 AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462
A I+LK+G YGL+R ++ + P A FS ++ + I IIY + ++ Q ++KK IAYSS
Sbjct: 250 AGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSS 309
Query: 463 IAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIIN 522
++HMGF+ +GI +T + GAI+Q+ISH I +A+F G Y++++ + GGI
Sbjct: 310 VSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAI 369
Query: 523 VIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
+P F FS+A+ +LPG SGF+ E ++ G++TS Y L +
Sbjct: 370 PMPKIFTMFSSFSMASLALPGMSGFVAELIVFF---------GIITSQ------KYLL-M 413
Query: 583 SKNIIFVLGQMIMISGNNLLSIYL 606
K +I + + MI L IYL
Sbjct: 414 PKILITFVMAIGMI----LTPIYL 433
Score = 48.0 bits (115), Expect = 3e-05
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 26/182 (14%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHAAT-MVTAGIFM------ITRMSPLFELSNTALS 102
K PLHTWLPD T A H +T M+ AGI + + R++ EL A S
Sbjct: 224 KLPIIPLHTWLPD-----THGEA--HYSTCMLLAGILLKMGAYGLIRIN--MELLPHAHS 274
Query: 103 I----ILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTV---SIFH 155
I ++ +GAI + + Q ++K+ IAYS++S +G++ +G+G T +I
Sbjct: 275 IFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQ 334
Query: 156 LMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMP-ITCITSLIGLLSLVGAPFFS 214
+++H F A LF AG+ ++ + MGG+ MP I + S + SL P S
Sbjct: 335 IISHGFIGAALFFLAGTSYDRIR-LVYLDEMGGIAIPMPKIFTMFSSFSMASL-ALPGMS 392
Query: 215 GF 216
GF
Sbjct: 393 GF 394
Score = 39.2 bits (92), Expect = 0.013
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 22/123 (17%)
Query: 684 LLIIVGLSF------KLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRL---- 733
L I+ + F KL I P H W+PD + A +LL+ I+ ++
Sbjct: 209 LEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAG--------ILLKMGAYG 260
Query: 734 LIKCLLPLVINWQKI----LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI 789
LI+ + L+ + I L+I+ +I +++ Q N K+ IAYSS++HMG ++ I
Sbjct: 261 LIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
Query: 790 ISI 792
SI
Sbjct: 321 GSI 323
>gnl|CDD|235050 PRK02546, PRK02546, NAD(P)H-quinone oxidoreductase subunit 4;
Provisional.
Length = 525
Score = 247 bits (632), Expect = 3e-71
Identities = 129/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
W+ + + +G DGLS+ I LT FIT + +L + + K + L + G I F
Sbjct: 73 WLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVF 132
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYL-YYI 343
D +LF++ +E LIP+++++ WGG R YAA KF LYT SL +L++ + + +Y
Sbjct: 133 AVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYG 192
Query: 344 SNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILA 403
+F++ + Q+ + IA+ +K+PI P+HTWLPDAH EA ++LA
Sbjct: 193 DTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLA 252
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
I+LK+G Y LLR + + PDA F+ L+I L +++IIY +L + Q ++K+ IAYSSI
Sbjct: 253 GILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSI 312
Query: 464 AHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINV 523
+HMGFV +GI T + GA++QMISH LI +++F +G Y++ T ++ GG+
Sbjct: 313 SHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQK 372
Query: 524 IPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK-------FNFCIGVLTSTALIFSA 576
+ + SLA+ +LPG SGF+ E M+ + F + L + +I +
Sbjct: 373 MRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAVGVILTP 432
Query: 577 AYSLCLSKNIIF 588
Y L + + I F
Sbjct: 433 IYLLSMLREIFF 444
Score = 56.6 bits (137), Expect = 5e-08
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 566 VLTS--TALIFSAAYSLCLSKNIIFVL------GQMIMISGNNLLSIYLG--LELMSLTL 615
+LT T L AA+ + + + L GQ+ + + ++L +L LEL+ + L
Sbjct: 94 LLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
Query: 616 CVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISIL--YGITGTLELQSIFNVIKLNN 673
+ I K + AA K+ + SS F+L + YG T T ++ ++ K
Sbjct: 154 LLAIWGGKKRQY---AATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAA--KDFG 208
Query: 674 INCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVIIYR 732
+ +L + LLI G+ KL I P H W+PD + A+ + +LL+ K+ + ++ R
Sbjct: 209 LGFQLLCYAGLLIAYGV--KLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALL-R 265
Query: 733 LLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
+ L + +L++L + ++I +++ Q N KR IAYSSI+HMG +L I S
Sbjct: 266 MNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGS 324
Score = 50.5 bits (121), Expect = 4e-06
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 54 FPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRMSPLFELSNTAL--SIILFIGAI 110
PLHTWLPD+ E P L+ A ++ G + + RM+ A +++ +G +
Sbjct: 230 VPLHTWLPDAHGEATAPVHMLL-AGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVV 288
Query: 111 TAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLG-VSAYTVS--IFHLMTHAFFKALLF 167
+ L Q ++KR IAYS++S +G++ +G+G + S + +++H A LF
Sbjct: 289 NIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLF 348
Query: 168 LSAGSIIINMKHNQDIRNMGGLYKYMPI 195
G+ + H + MGG+ + M
Sbjct: 349 FLVGA-TYDRTHTLMLDEMGGVGQKMRK 375
>gnl|CDD|214416 MTH00066, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 598
Score = 249 bits (638), Expect = 3e-71
Identities = 126/261 (48%), Positives = 164/261 (62%), Gaps = 44/261 (16%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
+NNLFQLF+GWE VG+ S+LLIG+W+ + A TA L+A L NR+G
Sbjct: 132 ANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNT 191
Query: 47 -------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVT 81
A KSAQF LH WLP +MEGPTP SAL+H++TMV
Sbjct: 192 NSWELQQIFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVV 251
Query: 82 AGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMT 141
AGIF++ R PL E + TAL+I L +GA+T F + QNDIK+I+A+ST SQLG M
Sbjct: 252 AGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMM 311
Query: 142 VGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPIT--CIT 199
V +G++ ++ FH+ THAFFKA+LFL +GSII ++ QDIR MGGL K +PIT C+T
Sbjct: 312 VTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLT 371
Query: 200 SLIGLLSLVGAPFFSGFYSKD 220
IG L+L G PF +GF+SKD
Sbjct: 372 --IGSLALTGTPFLAGFFSKD 390
Score = 54.9 bits (133), Expect = 2e-07
Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 36/372 (9%)
Query: 226 IDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL-----DIK-KKLAEYMSAFLILSGL 279
I FNI D S+ F+P+ F+T I+ ++ D K + +Y+ FLI +
Sbjct: 69 IFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMI 128
Query: 280 IIGAFCALDGMLFYIF--FEATLIPIFIIIGTW-GGSNRSYAAIKFFLYTLMGSLLMLIS 336
++ A LF +F +E I F++IG W ++ + AA++ LY +G + +++S
Sbjct: 129 LVTA-----NNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILS 183
Query: 337 MIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPT 396
M +L + N Q+ + + +A A K + +H WLP A +E PT
Sbjct: 184 MAWLA----MNTNSWELQQIFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPT 238
Query: 397 EGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSL--ISIIYISLIAMVQID 453
S +L ++ M+ G + L+RF P+ + + L I L L ++ ++ + A+ Q D
Sbjct: 239 PVSALLHSSTMVVAGIFLLIRFH-PLLENNQ---TALTICLCLGALTTLFTAACALTQND 294
Query: 454 IKKLIAYSSIAHMGF--VTLGIFMLTKISIQGAIIQMISHALISSAMFISIG-FLYNQMK 510
IKK++A+S+ + +G VT+G+ Q A + +HA + +F+ G +++
Sbjct: 295 IKKIVAFSTSSQLGLMMVTIGLNQ-----PQLAFFHICTHAFFKAMLFLCSGSIIHSLND 349
Query: 511 TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII--LSAVKFNFCIGVLT 568
+ I GG+ +P + I SLA P +GF + II ++ N +LT
Sbjct: 350 EQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILT 409
Query: 569 STALIFSAAYSL 580
A F+A YS
Sbjct: 410 LIATSFTAVYSF 421
Score = 38.0 bits (89), Expect = 0.036
Identities = 85/303 (28%), Positives = 144/303 (47%), Gaps = 37/303 (12%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLE---LMSLTLCVLIASQKNNIFSSEAAIKYFILGILSS 643
IF++ MI+++ NNL +++G E +MS L ++ + ++ A+ Y +G +
Sbjct: 121 IFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDI-- 178
Query: 644 GFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWV 703
G +L ++ L T + ELQ IF L N N ++ L L+L G S + G H W+
Sbjct: 179 GLIL-SMAWLAMNTNSWELQQIF----LLNDNSTLPLLGLILAAAGKSAQFG---LHPWL 230
Query: 704 PDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL---LILAIFSLIIG 760
P +G + + LL S+T + V LLI+ PL+ N Q L L L + +
Sbjct: 231 PAAMEGPTPVSALLHSST----MVVAGIFLLIR-FHPLLENNQTALTICLCLGALTTLFT 285
Query: 761 NVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAIL 820
A+TQ + K+++A+S+ + +GLM+ ++I + L F+ C F + ++ +
Sbjct: 286 AACALTQNDIKKIVAFSTSSQLGLMM---VTIGLNQPQLAFFHICTHAFFKAMLFLCS-- 340
Query: 821 GAFGVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFF 878
G II + DE DI GL + P + I +L G P GF++K
Sbjct: 341 ---GSIIH------SLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDA 391
Query: 879 IFE 881
I E
Sbjct: 392 IIE 394
>gnl|CDD|214435 MTH00150, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 417
Score = 241 bits (617), Expect = 3e-70
Identities = 118/354 (33%), Positives = 188/354 (53%), Gaps = 6/354 (1%)
Query: 233 YFLGIDGLSLWFIPLTAFITLIIILISLDIKKKL---AEYMSAFLILSGLIIGAFCALDG 289
+D +S I L+ +I+ +++L S K + + L+L +++ AF
Sbjct: 18 ELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSL 77
Query: 290 MLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSF 348
++FY FFEA+LIP ++I WG R A + LYT+ SL +L+ ++++ S S
Sbjct: 78 LMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSS-SYGSS 136
Query: 349 NILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLK 408
+L L + F+AF +K+P++P H WLP AHVEAP GS+ILA I+LK
Sbjct: 137 FMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLK 196
Query: 409 LGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGF 468
LG YG+LR + +F +S FS +I+LSL + SLI + Q D+K LIAYSS+ HM
Sbjct: 197 LGGYGILRMMM-VFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
Query: 469 VTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFS 528
V G+ T GA+I M+SH SS +F + Y ++ +R + G++ + P S
Sbjct: 256 VLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
Query: 529 VFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
+++ +F + N + P + + E MI S + ++ V + S YSL L
Sbjct: 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYL 369
Score = 44.4 bits (106), Expect = 3e-04
Identities = 33/128 (25%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 671 LNNINCSVLALSLLLIIVGLSF--KLGISPFHMWVPDVY-----QGASIIITLLLSTTPK 723
++++ + ++ L ++V L+F KL + PFH+W+P + G+ I+ +LL K
Sbjct: 141 ISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILL----K 196
Query: 724 LSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMG 783
L + I+ +++ L + L+ L+++ ++ ++ + Q + K +IAYSS+ HM
Sbjct: 197 LGGYGILRMMMVFSLSSSS--FSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
Query: 784 LMLFSIIS 791
L+L ++S
Sbjct: 255 LVLAGVLS 262
Score = 41.4 bits (98), Expect = 0.003
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 34/175 (19%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGI------FMITRMS 91
AFL+ K +P H WLP + +E P A +M+ AGI + I RM
Sbjct: 161 AFLV-------KLPMYPFHLWLPKAHVEAPV-------AGSMILAGILLKLGGYGILRMM 206
Query: 92 PLFELSNTALSIILFIGAITAFFMGLLGII----QNDIKRIIAYSTLSQLGYMTVGLGVS 147
+F LS+++ SI L ++ + G+L + Q+D+K +IAYS++ + + G+ +S
Sbjct: 207 MVFSLSSSSFSIFLISLSL---WGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGV-LS 262
Query: 148 AYTV----SIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCI 198
+ ++ +++H F + LF A H++ + G+ P +
Sbjct: 263 NTSWGWVGALIMMVSHGFCSSGLFCLAN-YTYEKVHSRSLFLSKGMLMLYPSLSL 316
>gnl|CDD|214459 MTH00211, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 597
Score = 239 bits (611), Expect = 1e-67
Identities = 120/260 (46%), Positives = 160/260 (61%), Gaps = 40/260 (15%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+NNLFQLF+GWE VG+ S+LLI +WY + A TA L+A + NRIG
Sbjct: 128 SANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLN 187
Query: 47 --------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMV 80
AM KSAQF H WLP +MEGPTP SAL+H++TMV
Sbjct: 188 LNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMV 247
Query: 81 TAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYM 140
AG+F++ R+SPLF+ + L +L +GA+T F L + QNDIK+I+A+ST SQLG M
Sbjct: 248 VAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLM 307
Query: 141 TVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITS 200
V LG++ ++ H+ THAFFKA+LF+ +GSII + + QDIR MGGL K +P T
Sbjct: 308 MVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCL 367
Query: 201 LIGLLSLVGAPFFSGFYSKD 220
+G L+L+G PF SGF+SKD
Sbjct: 368 FLGSLALMGFPFLSGFFSKD 387
Score = 65.7 bits (161), Expect = 8e-11
Identities = 116/477 (24%), Positives = 217/477 (45%), Gaps = 43/477 (9%)
Query: 161 FFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
F +L L +++ + ++ + K + ++ SLI LL + G +
Sbjct: 8 GFLLILILLLLPLLLPLNNS-----KLHIKKAVKLSFFISLIPLLIFLD----QGLETIL 58
Query: 221 KKKIWIDY--FNIYYFLGIDGLSLWFIPLTAFITLIIILISL-----DIK-KKLAEYMSA 272
WI+ F++ D S++F + ++T I+ SL + + +Y+
Sbjct: 59 TNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLL 118
Query: 273 FLILSGLIIGAFCALDGMLFYIF--FEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMG 329
FLI +++ A LF +F +E I F++I W G S+ + AA++ +Y +G
Sbjct: 119 FLIFMLILVSA-----NNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIG 173
Query: 330 SLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPD 389
+ +L+SM++L N S+ I L++ + +A K + H WLP
Sbjct: 174 DIGLLLSMVWLLLNLN-SWEISQLFILNLD---LTLFLLGLLLAAMGKSAQFGFHPWLPS 229
Query: 390 AHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIA 448
A +E PT S +L ++ M+ G + L+R S P+F + + ++ L +++++ +L A
Sbjct: 230 A-MEGPTPVSALLHSSTMVVAGVFLLIRLS-PLFQN-NQLILGAVLLLGALTMLFGALCA 286
Query: 449 MVQIDIKKLIAYSSIAHMGF--VTLGIFMLTKISIQGAIIQMISHALISSAMFISIG-FL 505
+ Q DIKK++A+S+ + +G VTLG+ Q A + + +HA + +F+ G +
Sbjct: 287 LTQNDIKKIVAFSTTSQLGLMMVTLGL-----NQPQLAFLHICTHAFFKAMLFMCSGSII 341
Query: 506 YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII--LSAVKFNFC 563
+ + I GG+ +P S + SLA P SGF + +I+ ++ N
Sbjct: 342 HGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAW 401
Query: 564 IGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA 620
+LT A +AAYS L + + + +S N L L L L ++A
Sbjct: 402 ALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILA 458
Score = 53.8 bits (130), Expect = 4e-07
Identities = 105/442 (23%), Positives = 199/442 (45%), Gaps = 60/442 (13%)
Query: 474 FMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533
F+L I + ++ ++++ + + + F + + LI G+ ++ ++S +
Sbjct: 9 FLLILILLLLPLLLPLNNSKLHIKKAVKLSFFIS-LIPLLIFLDQGLETILTNWSWINLG 67
Query: 534 FSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAY-------SLCLSKNI 586
N S F ++ F +T + L FS Y + +
Sbjct: 68 LFSLNLS----------FKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLL 117
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F++ +I++S NNL +++G E + + +LI+ ++ AA++ I + +
Sbjct: 118 LFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGL 177
Query: 647 LYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDV 706
L + L + E+ +F + N++ ++ L LLL +G S + G FH W+P
Sbjct: 178 LLSMVWLLLNLNSWEISQLF----ILNLDLTLFLLGLLLAAMGKSAQFG---FHPWLPSA 230
Query: 707 YQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL---LILAIFSLIIGNVS 763
+G + + LL S+T + V LLI+ L PL N Q IL L+L +++ G +
Sbjct: 231 MEGPTPVSALLHSST----MVVAGVFLLIR-LSPLFQNNQLILGAVLLLGALTMLFGALC 285
Query: 764 AITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF--AILG 821
A+TQ + K+++A+S+ + +GLM+ + + N +I T+ F A+L
Sbjct: 286 ALTQNDIKKIVAFSTTSQLGLMMVT-----------LGLNQPQLAFLHICTHAFFKAML- 333
Query: 822 AF---GVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAK 876
F G II NN E DI GL + P+ + + + +L GFP GF++K
Sbjct: 334 -FMCSGSIIHGLNN------EQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSK 386
Query: 877 FFIFEKIFET-QKIWLLLLIIM 897
I E + + W LLL ++
Sbjct: 387 DLILESMNGSYLNAWALLLTLL 408
>gnl|CDD|180945 PRK07363, PRK07363, NAD(P)H-quinone oxidoreductase subunit M;
Validated.
Length = 501
Score = 227 bits (581), Expect = 2e-64
Identities = 122/335 (36%), Positives = 200/335 (59%), Gaps = 8/335 (2%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAF 284
W + + Y LG+DGLSL + L + +T I I + ++ Y S L+++G I GA
Sbjct: 65 WNEPLGLSYSLGVDGLSLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGAL 124
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLML---ISMIYLY 341
A + +LF++F+E LIP +++I WGG R YA+IKF +YT + LL+L + +++L
Sbjct: 125 LAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAFLGIVWLS 184
Query: 342 YISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVI 401
++ ++ +S LS+ Q+ L + F IKIP+ P+HTWLPDA+ EA +++
Sbjct: 185 GSTSFDYDAISTQNLSLNT--QLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAIL 242
Query: 402 LAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461
L ++ KLG YGLLRF L +FP + + + IS+IY +L A+ Q DIK+++AYS
Sbjct: 243 LGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYS 302
Query: 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII 521
SI HMG++ + T++S+ GA+ QMISH LI + +F +G + ++ TR + G++
Sbjct: 303 SIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLM 362
Query: 522 NVI---PHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
N I P S ++ +A+ +PG GF+ EF++
Sbjct: 363 NPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
Score = 76.3 bits (188), Expect = 4e-14
Identities = 96/324 (29%), Positives = 148/324 (45%), Gaps = 54/324 (16%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSE----AAIKYFILGILSSGFML---YGIS 651
NLL +L EL + +LIA I+ E A+IK+ I +S +L GI
Sbjct: 127 QNLLLFFLFYELELIPFYLLIA-----IWGGEKRGYASIKFLIYTAVSGLLVLAAFLGIV 181
Query: 652 ILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGAS 711
L G T ++ I N++ + + L +++G K+ + P H W+PD Y AS
Sbjct: 182 WLSGSTSF-----DYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEAS 236
Query: 712 IIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIF---SLIIGNVSAITQ 767
+ +LL KL + ++ L L P W + LAI S+I G +SAI Q
Sbjct: 237 PAVAILLGGVLAKLGTYGLLRFGL--QLFPQT--WSLVAPGLAIIGTISVIYGALSAIAQ 292
Query: 768 YNFKRMIAYSSIAHMGLMLFSI-----ISIKTSHNNLIIFNSCDSGLFYIITYIFAILGA 822
+ KRM+AYSSI HMG +L + +S+ + +I + LF+++ + +G
Sbjct: 293 KDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVG- 351
Query: 823 FGVIILLKNNTCNKTDELDIFIGLHQRNP------WCALIMMIFMFSLAGFPPTIGFYAK 876
T +LD+ GL NP AL+++ M S AG P +GF A+
Sbjct: 352 --------------TRDLDVLNGL--MNPIRGLPLTSALLVLAGMAS-AGIPGLVGFVAE 394
Query: 877 FFIFEKIFETQKIWLLLLIIMCSL 900
F +F+ F T I LL I+ L
Sbjct: 395 FIVFQGSFSTFPIPTLLCIVASGL 418
Score = 55.1 bits (133), Expect = 2e-07
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 55 PLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS-PLF-ELSNTALSIILFIGAITA 112
PLHTWLPD+ +PA A++ + G + + R LF + + + IG I+
Sbjct: 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISV 282
Query: 113 FFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHAFFKALLF 167
+ L I Q DIKR++AYS++ +GY+ V + ++ +++H ALLF
Sbjct: 283 IYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLF 340
>gnl|CDD|236753 PRK10757, PRK10757, inositol monophosphatase; Provisional.
Length = 267
Score = 217 bits (555), Expect = 7e-64
Identities = 97/250 (38%), Positives = 161/250 (64%), Gaps = 1/250 (0%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
A++AARK+ +I + + + +K +FV N++KA+E +I + +YP + + +
Sbjct: 8 AVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITE 67
Query: 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTA 1044
+S L + + W+IDPLD TNF P + +SIA++ K + +V+YDP+RN+LFTA
Sbjct: 68 ESGELEGEDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTA 127
Query: 1045 IKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIF-QIITKCKNLRNIGT 1103
+G GA LN R+R + ++ ++ T F FK ++ Y I ++ T+C + R G+
Sbjct: 128 TRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQHATTYINIVGKLFTECADFRRTGS 187
Query: 1104 SSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVAGNQ 1163
++L+LAYVA+G++DGFFE GLKPW+ AAG LL+ E+GGI+S+F G NY+ TG+IVAGN
Sbjct: 188 AALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNP 247
Query: 1164 KIFSQIISLI 1173
++ +++ +
Sbjct: 248 RVVKAMLANM 257
>gnl|CDD|177251 MTH00208, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 628
Score = 229 bits (585), Expect = 8e-64
Identities = 118/263 (44%), Positives = 159/263 (60%), Gaps = 44/263 (16%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
SNNLF LF+GWE VG S+LLI +W + A ++ L+A + NRIG
Sbjct: 157 SNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINF 216
Query: 47 -----------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAA 77
A KSAQF LH WLP +MEGPTP SAL+H++
Sbjct: 217 NSWNLNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSS 276
Query: 78 TMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQL 137
TMV AG+F++ R SPL S LS+ L +G++TA F I Q+DIK+IIAYST SQL
Sbjct: 277 TMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQL 336
Query: 138 GYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITC 197
G M V +G++ +++FH+ THAFFKA+LFL +GSII ++ + QD+R MGGL +P+T
Sbjct: 337 GLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTS 396
Query: 198 ITSLIGLLSLVGAPFFSGFYSKD 220
++G L+L+G PF +GFYSKD
Sbjct: 397 SCIILGSLALMGTPFLAGFYSKD 419
Score = 48.8 bits (117), Expect = 1e-05
Identities = 75/305 (24%), Positives = 145/305 (47%), Gaps = 31/305 (10%)
Query: 291 LFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFN 349
L +I +E F++I W ++ + +A++ +Y +G I +I +S +FN
Sbjct: 162 LLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGD----IGIILFLSLSLINFN 217
Query: 350 ILSWHQLSITKIEQIWLFITFFIAFAI------KIPIWPMHTWLPDAHVEAPTEGSVIL- 402
SW+ I + F+ + F I K + +H WLP A +E PT S +L
Sbjct: 218 --SWNLNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLH 274
Query: 403 AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462
++ M+ G + L+R S P+ + S +F +L + L ++ ++ + A+ Q DIKK+IAYS+
Sbjct: 275 SSTMVVAGVFLLIRTS-PLISN-SPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYST 332
Query: 463 IAHMGFVT----LGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKT-RLISNF 517
+ +G + L L A+ + +HA + +F+ G + + + + +
Sbjct: 333 TSQLGLMVVAIGLNQPNL-------ALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKM 385
Query: 518 GGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII-LSAVKFNFCIGVLTST-ALIFS 575
GG+ ++P S I+ SLA P +GF + +I+ + + ++ + A + +
Sbjct: 386 GGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLT 445
Query: 576 AAYSL 580
A YS
Sbjct: 446 AVYSF 450
Score = 43.8 bits (104), Expect = 5e-04
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILG-ILSSG 644
IIF+L +I+ S NNL +++G E + +LI+ ++ +A++ I I G
Sbjct: 145 IIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIG 204
Query: 645 FMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+L+ +S+ + L I ++ N+ ++L +LL G S + G H W+P
Sbjct: 205 IILF-LSLSLINFNSWNLNEILSLNNSNSFLINILLFGILLAAAGKSAQFG---LHPWLP 260
Query: 705 DVYQGASIIITLLLSTTPKLSLFVIIYRLLIKC--LLPLVINWQKILLILAIFSLIIGNV 762
+G + + LL S+T + V LLI+ L+ + + LIL + +
Sbjct: 261 AAMEGPTPVSALLHSST----MVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAAS 316
Query: 763 SAITQYNFKRMIAYSSIAHMGLMLFSI 789
+AI+Q++ K++IAYS+ + +GLM+ +I
Sbjct: 317 TAISQHDIKKIIAYSTTSQLGLMVVAI 343
>gnl|CDD|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related
enzymes of inositol monophosphatase family [Carbohydrate
transport and metabolism].
Length = 260
Score = 216 bits (551), Expect = 2e-63
Identities = 98/253 (38%), Positives = 154/253 (60%), Gaps = 3/253 (1%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFLI 983
A++AARK+ +I EL+ + E KK + V +KA+E+II L +P + L
Sbjct: 8 ALRAARKAGALILPLFRELDAVEVEVKKSDGDPVTEADKAAERIIRARLRAAFPDHGILG 67
Query: 984 KKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
++S +E +W+IDP+D TNF P + +SIAL + + VIYDP +L+T
Sbjct: 68 EESGGALGGGDEYVWVIDPIDGTTNFVRGIPFFAVSIALVEDGEPVAGVIYDPATGELYT 127
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIF-QIITKCKNLRNIG 1102
A KG GAYLN +RI+V+ R +N +L+GT F K+ Y I +++ K + +R G
Sbjct: 128 AAKGKGAYLNGRRIKVSLRTSLNASLLGTGFPGKSLARFPAYLNILAKLLRKVRRVRRYG 187
Query: 1103 TSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEK-NYLYTGDIVAG 1161
+++L+LAYVA+G+LDGF E GL+PW+IAAG L++ E+GGI+++ G + G IVAG
Sbjct: 188 SAALDLAYVAAGRLDGFVEFGLRPWDIAAGVLIVREAGGIVTDLDGGPLDPNSGGSIVAG 247
Query: 1162 NQKIFSQIISLIN 1174
N K+ +++ +
Sbjct: 248 NPKLHDELLEALR 260
>gnl|CDD|214458 MTH00206, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 450
Score = 222 bits (568), Expect = 2e-63
Identities = 131/385 (34%), Positives = 202/385 (52%), Gaps = 13/385 (3%)
Query: 203 GLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI 262
S + A F ++ + W +L D LS + L+ ++ ++ L S +
Sbjct: 26 TFFSFLIALLFLLWFKWSSEVGWS---FSNLYLSYDPLSSPLVILSCWLLPLMFLASQNH 82
Query: 263 KKKLAE-----YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWG-GSNRS 316
K Y++ ++L +I F + + +LFYI FEA+LIP ++I WG R
Sbjct: 83 MKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERL 142
Query: 317 YAAIKFFLYTLMGSLLMLISMIYLY-YISNKSFNILSWHQLSITKIEQIWLFITFFIAFA 375
A F YTL+GSL +LI++++L + + S IL + +L+ WL +AF
Sbjct: 143 NAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLAC--ILAFL 200
Query: 376 IKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIIT 435
+K+P++ +H WLP AHVEAP GS++LA ++LKLG YG++R L + P II
Sbjct: 201 VKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFII- 259
Query: 436 LSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALIS 495
L L I S I + Q D+K LIAYSS++HM VT GI + +GA++ MI+H L+S
Sbjct: 260 LGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVS 319
Query: 496 SAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIIL 555
SA+F LY + TR I G+ ++P S ++++F LAN LP GE +II
Sbjct: 320 SALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIIT 379
Query: 556 SAVKFNFCIGVLTSTALIFSAAYSL 580
S ++ L +F+A YSL
Sbjct: 380 SLFSWSNFTLPLLGLGFLFTAIYSL 404
Score = 46.9 bits (112), Expect = 4e-05
Identities = 72/366 (19%), Positives = 134/366 (36%), Gaps = 42/366 (11%)
Query: 547 FIGEFMIILSAVKFNFCI----GVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLL 602
+ ++ILS + + + Y L +F++ + S +NLL
Sbjct: 59 PLSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLI---LFFSSSNLL 115
Query: 603 SIYLGLELMSLTLCVLI---ASQKNNIFSSEAAIKYFILGILSSGF-MLYGISILYGITG 658
Y+ E + +LI +QK + + YF+ L +L + L G
Sbjct: 116 LFYILFEASLIPTLLLITRWGNQKERLNAG----YYFLFYTLIGSLPLLIALLFLQNSLG 171
Query: 659 TLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASII-ITLL 717
+L L ++ N L L I+ KL + H+W+P + A + +L
Sbjct: 172 SLSLYILYFSKLTTWNN----NLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVL 227
Query: 718 LSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYS 777
KL + ++ +I L P +IL ++ I+ + + Q + K +IAYS
Sbjct: 228 AGVLLKLGGYGMM--RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYS 285
Query: 778 SIAHM-----GLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNN 832
S++HM G++ S K + +I S LF ++ +++
Sbjct: 286 SVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFC-----------LANLLYERSH 334
Query: 833 TCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLL 892
T + GL P + ++F + G PP + + I +F L
Sbjct: 335 TRT----ILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLP 390
Query: 893 LLIIMC 898
LL +
Sbjct: 391 LLGLGF 396
Score = 40.3 bits (95), Expect = 0.006
Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 18/221 (8%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLF-ELSNTALSI 103
+ + K + +H WLP + A +++ A ++ G + + R+ + + +
Sbjct: 197 LAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYF 256
Query: 104 ILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSI---FHLM-TH 159
+ +G + + + Q D+K +IAYS++S + +T G+ +S LM H
Sbjct: 257 FIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGI-LSGSPWGFKGALLLMIAH 315
Query: 160 AFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+ LF A + H + I GL +P+ L+ L+ +G P F + +
Sbjct: 316 GLVSSALFCLANLLYERS-HTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGE 374
Query: 220 DKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL 260
+ + S + +PL L + SL
Sbjct: 375 -----------LLIITSLFSWSNFTLPLLGLGFLFTAIYSL 404
>gnl|CDD|214457 MTH00205, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 448
Score = 213 bits (544), Expect = 4e-60
Identities = 122/371 (32%), Positives = 195/371 (52%), Gaps = 6/371 (1%)
Query: 216 FYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI-KKKLAEYMSAFL 274
F S ++ I D LSL I L+ +I+L+++L S + K +
Sbjct: 34 FSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVS 93
Query: 275 ILSGLIIG--AFCALDGMLFYIFFEATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSL 331
++ L+I +F + +LFYI FEA+LIP I+I WG R A++ +YTL SL
Sbjct: 94 VIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASL 153
Query: 332 LMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAH 391
+LI + +L N S ++ L+ + +I +AF +K+P++ +H WLP AH
Sbjct: 154 PLLIGLFFLNS-LNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAH 212
Query: 392 VEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQ 451
VEAP GS+ILA ++LKLG YGL+R + ++ + FS L ++SL + +I + Q
Sbjct: 213 VEAPVSGSMILAGVLLKLGGYGLIRITSMLY-KLNSNFSELFFSISLWGGVMTGMICLRQ 271
Query: 452 IDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKT 511
+D+K LIAYSS+ HMG + +G+F T + GAII M++H L SS MF Y + +
Sbjct: 272 VDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNS 331
Query: 512 RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTA 571
R + G++N P + + + N + P + E ++I+S + + G+ S
Sbjct: 332 RSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLI 391
Query: 572 LIFSAAYSLCL 582
S AYSL L
Sbjct: 392 SFLSGAYSLYL 402
Score = 31.9 bits (73), Expect = 2.4
Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 37/284 (13%)
Query: 527 FSVFFIIFSLANCSL--PGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSK 584
+FF F +N L S + L + +F I +L A + S SK
Sbjct: 30 IGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLA-SYKVFKSNKNSK 88
Query: 585 NIIFVLGQMIMI-----SGNNLLSIYLGLELMSLTLCVLI---ASQKNNIFSSEAAIKYF 636
+ +++I S +NLL Y+ E + +LI Q + +S + Y
Sbjct: 89 LFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYT 148
Query: 637 ILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSF--KL 694
+ L +L G+ L + +L S+F LN S L L I + L+F KL
Sbjct: 149 LCASLP---LLIGLFFLNSLNFSL---SMFFNFPLNF---SDFYLFLYWIFLMLAFLVKL 199
Query: 695 GISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRL----LIKCLLPLVINWQKILL 750
+ H+W+P + A + +++L+ ++ +L LI+ L
Sbjct: 200 PMYFVHLWLPKAHVEAPVSGSMILAG--------VLLKLGGYGLIRITSMLYKLNSNFSE 251
Query: 751 ILAIFSLIIGNVSAIT---QYNFKRMIAYSSIAHMGLMLFSIIS 791
+ SL G ++ + Q + K +IAYSS+ HMGLM+ + S
Sbjct: 252 LFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFS 295
Score = 30.3 bits (69), Expect = 6.7
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 57 HTWLPDS-MEGPTPASALIHAATMVTAGIF-------MITRMSPLFELSNTALSIILFIG 108
H WLP + +E P S M+ AG+ +I S L++L++ + I
Sbjct: 205 HLWLPKAHVEAPVSGS-------MILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSIS 257
Query: 109 AITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL 144
G++ + Q D+K +IAYS++ +G M VG+
Sbjct: 258 LWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGV 293
>gnl|CDD|214417 MTH00068, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 458
Score = 211 bits (540), Expect = 2e-59
Identities = 133/357 (37%), Positives = 201/357 (56%), Gaps = 13/357 (3%)
Query: 234 FLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAE-----YMSAFLILSGLIIGAFCALD 288
+ GID +S + LT ++ ++IL S + K Y+S +IL +I AF A +
Sbjct: 55 YFGIDQISSPLLILTCWLLPLMILASQNHLKNEPINRQRTYISMLIILQLTLILAFSATE 114
Query: 289 GMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFL-YTLMGSLLMLISMIYLYYISNKS 347
+LFYIFFEATLIP III WG A +FL YTL GSL +LI+++ L S
Sbjct: 115 LILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLG-S 173
Query: 348 FNILSWHQLSITKIE----QIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILA 403
+++ +S ++ +IW +AF +K+P++ +H WLP AHVEAP GS+ILA
Sbjct: 174 LSLILLELMSPMQLMTYTNKIWWL-ACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILA 232
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
A++LKLG YG+LR S + S S I L+L ++ SLI + Q D+K LIAYSS+
Sbjct: 233 AVLLKLGGYGILRIS-ILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSV 291
Query: 464 AHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINV 523
+HMG V + T S GAII MISH L SSA+F Y + +R + G +
Sbjct: 292 SHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTI 351
Query: 524 IPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSL 580
+P + ++++ +L+N +LP + GE I++S ++ ++T + +AAY+L
Sbjct: 352 LPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTL 408
Score = 39.5 bits (93), Expect = 0.009
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 48 MAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILF 106
M K + LH WLP + +E P A ++I AA ++ G + I R+S L + LS
Sbjct: 204 MVKMPLYGLHLWLPKAHVEAPI-AGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFI 262
Query: 107 IGAITAFFM-GLLGIIQNDIKRIIAYSTLSQLG 138
I A+ M L+ + Q D+K +IAYS++S +G
Sbjct: 263 ILALWGVLMTSLICLRQTDLKSLIAYSSVSHMG 295
Score = 35.7 bits (83), Expect = 0.14
Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSF--KLGISPFHMWV 703
+L + IL G+L S+ + ++ + + + L+F K+ + H+W+
Sbjct: 160 LLIALLILQNSLGSL---SLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWL 216
Query: 704 PDVYQGASIIITLLLSTTP-KLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNV 762
P + A I +++L+ KL + I+ R+ I L PL +ILA++ +++ ++
Sbjct: 217 PKAHVEAPIAGSMILAAVLLKLGGYGIL-RISI-LLTPLSKELSYPFIILALWGVLMTSL 274
Query: 763 SAITQYNFKRMIAYSSIAHMGL 784
+ Q + K +IAYSS++HMGL
Sbjct: 275 ICLRQTDLKSLIAYSSVSHMGL 296
>gnl|CDD|214411 MTH00044, ND4, NADH dehydrogenase subunit 4; Validated.
Length = 458
Score = 210 bits (537), Expect = 4e-59
Identities = 135/362 (37%), Positives = 193/362 (53%), Gaps = 10/362 (2%)
Query: 228 YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMS-AFLILSGLIIGA--- 283
+ N+ L D LS I L+ ++ + +L S++ + F+ L +I+ A
Sbjct: 50 WHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQRTFISLIIIILTALII 109
Query: 284 -FCALDGMLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLY 341
F +L+ +LFYI FE TLIP I+I WG R A + F YTL GSL +LIS+I +Y
Sbjct: 110 TFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIY 169
Query: 342 YISNKSF---NILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEG 398
S+ + L+W + IW +AF +K+PI+ H WLP AHVEAP G
Sbjct: 170 SSSSSLSIPLSELNWLTSLSSNSSSIWWIFCI-LAFLVKMPIYGFHLWLPKAHVEAPVAG 228
Query: 399 SVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLI 458
S+ILAAI+LKLG YGL+R ++ S ++I + S+I + Q D+K LI
Sbjct: 229 SMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALI 288
Query: 459 AYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFG 518
AYSS+ HM V GIF T I GA+I MI+H L+SSA+F LY + TR +S
Sbjct: 289 AYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITR 348
Query: 519 GIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAY 578
G + P ++++IF AN LP IGE +II S + ++ + A +F A Y
Sbjct: 349 GFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIY 408
Query: 579 SL 580
SL
Sbjct: 409 SL 410
Score = 43.4 bits (103), Expect = 6e-04
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 586 IIFVLGQMIM-ISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSG 644
II +L +I+ S L+ Y+ E + +LI +A + + + S
Sbjct: 100 IIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSL 159
Query: 645 FMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+L + +Y + +L + + + L +++ + ++ + I+ K+ I FH+W+P
Sbjct: 160 PLLISLIAIYSSSSSLSI-PLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLP 218
Query: 705 DVYQGASIIITLLLSTTP-KLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVS 763
+ A + +++L+ KL + +I RL+ LP N IL++ + +I ++
Sbjct: 219 KAHVEAPVAGSMILAAILLKLGGYGLI-RLINLFSLPSANNISFILIVFCCWGALITSII 277
Query: 764 AITQYNFKRMIAYSSIAHMGLMLFSIISI 792
+ Q + K +IAYSS+ HM L+ I S
Sbjct: 278 CLRQTDLKALIAYSSVGHMSLVAAGIFSG 306
Score = 31.1 bits (71), Expect = 4.3
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 54 FPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLF-ELSNTALSIILFIGAI-T 111
+ H WLP + A ++I AA ++ G + + R+ LF S +S IL +
Sbjct: 211 YGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWG 270
Query: 112 AFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVG 143
A ++ + Q D+K +IAYS++ + + G
Sbjct: 271 ALITSIICLRQTDLKALIAYSSVGHMSLVAAG 302
>gnl|CDD|214427 MTH00124, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 457
Score = 209 bits (535), Expect = 8e-59
Identities = 116/318 (36%), Positives = 181/318 (56%), Gaps = 10/318 (3%)
Query: 269 YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTL 327
+++ ++L +I AF A + LFYI FEATLIP I+I WG R A F YTL
Sbjct: 95 FLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTL 154
Query: 328 MGSLLMLISMIYLYYISNKS--FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385
+ SL +LI+++YL+ + + H + L++ +AF +K+P++ +H
Sbjct: 155 ISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHL 214
Query: 386 WLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYIS 445
WLP AHVEAP GS++LAAI+LKLG YG++R + + P S +TL+L + S
Sbjct: 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGIIRIT-LLLPPLSNTLHYPFLTLALWGALMTS 273
Query: 446 LIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFL 505
LI + Q D+K LIAYSS++HMG V + T S+ GA+I MI+H L SS +F
Sbjct: 274 LICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTN 333
Query: 506 YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFC-- 563
Y + +R + G+ ++P + ++++ +L N +LP T +GE I+ S FN+
Sbjct: 334 YERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSL--FNWSPT 391
Query: 564 -IGVLTSTALIFSAAYSL 580
I +LT A + +A+Y+L
Sbjct: 392 TI-ILTGLATLITASYTL 408
Score = 34.8 bits (81), Expect = 0.30
Identities = 14/42 (33%), Positives = 29/42 (69%)
Query: 749 LLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSII 790
L LA++ ++ ++ + Q + K +IAYSS++HMGL++ + +
Sbjct: 261 FLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATM 302
Score = 32.1 bits (74), Expect = 1.7
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 48 MAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILF 106
M K + LH WLP + +E P A +++ AA ++ G + I R++ L + L
Sbjct: 204 MVKMPLYGLHLWLPKAHVEAPI-AGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFL 262
Query: 107 I----GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMT 141
GA+ L+ + Q D+K +IAYS++S +G +
Sbjct: 263 TLALWGALMT---SLICLRQTDLKSLIAYSSVSHMGLVI 298
>gnl|CDD|201180 pfam00361, Oxidored_q1, NADH-Ubiquinone/plastoquinone (complex I),
various chains. This family is part of complex I which
catalyzes the transfer of two electrons from NADH to
ubiquinone in a reaction that is associated with proton
translocation across the membrane.
Length = 270
Score = 202 bits (517), Expect = 1e-58
Identities = 98/273 (35%), Positives = 158/273 (57%), Gaps = 4/273 (1%)
Query: 286 ALDGMLFYIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLYTLMGSLLMLISMIYLYYIS 344
+ + +L Y+ +E +P +++IG WG S A++K+FLYT +GSL +L ++YLY ++
Sbjct: 1 SNNLLLMYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYLYGLT 60
Query: 345 NKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAA 404
S + + + L + +AF +K P +P H WLPDA P S+ILA
Sbjct: 61 G-SLSFTLLFLFGLNSNGLLLLSLLLLVAFLVKSPQFPFHFWLPDAMEGPPPVSSLILAT 119
Query: 405 IMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464
+ K G Y LLR S +S S +++ L ++S++ SL A+ Q DIKKL+AYSSI+
Sbjct: 120 TLKKAGLYLLLRLSNLFS--SSNLISYILLILGILSMLLGSLGALNQTDIKKLLAYSSIS 177
Query: 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVI 524
HMGF+ +GI L I GAII +ISH S+ +F+ G + ++ +R + N+GG+ N +
Sbjct: 178 HMGFMLIGILSLGNYGIIGAIIHLISHGFFSALLFLLAGLIIHRSGSRDLRNYGGLFNSM 237
Query: 525 PHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
P ++ ++ L+ LP GFI +F+I+ S
Sbjct: 238 PILALLLLLLLLSLSGLPPLLGFISKFLILESL 270
Score = 175 bits (447), Expect = 3e-49
Identities = 104/265 (39%), Positives = 144/265 (54%), Gaps = 47/265 (17%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
SNNL ++LGWE++G+ SYLLIGFW P ++ A+LK FL +G
Sbjct: 1 SNNLLLMYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYLYGLT 60
Query: 47 ----------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAAT 78
+ KS QFP H WLPD+MEGP P S+LI A T
Sbjct: 61 GSLSFTLLFLFGLNSNGLLLLSLLLLVAFLVKSPQFPFHFWLPDAMEGPPPVSSLILATT 120
Query: 79 MVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLG 138
+ AG++++ R+S LF SN I+L +G ++ L + Q DIK+++AYS++S +G
Sbjct: 121 LKKAGLYLLLRLSNLFSSSNLISYILLILGILSMLLGSLGALNQTDIKKLLAYSSISHMG 180
Query: 139 YMTVG---LGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPI 195
+M +G LG +I HL++H FF ALLFL AG II ++D+RN GGL+ MPI
Sbjct: 181 FMLIGILSLGNYGIIGAIIHLISHGFFSALLFLLAGLIIHRS-GSRDLRNYGGLFNSMPI 239
Query: 196 TCITSLIGLLSLVGAPFFSGFYSKD 220
+ L+ LLSL G P GF SK
Sbjct: 240 LALLLLLLLLSLSGLPPLLGFISKF 264
Score = 165 bits (421), Expect = 9e-46
Identities = 97/283 (34%), Positives = 155/283 (54%), Gaps = 16/283 (5%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG 658
NNLL +YLG EL+ L +LI + S EA++KYF+ L S F+L+GI LYG+TG
Sbjct: 2 NNLLLMYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYLYGLTG 61
Query: 659 TLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLL 718
+L +F +N + L L LL++V K PFH W+PD +G + +L+L
Sbjct: 62 SLSFTLLFL----FGLNSNGLLLLSLLLLVAFLVKSPQFPFHFWLPDAMEGPPPVSSLIL 117
Query: 719 STTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSS 778
+TT K + ++ RL L ILLIL I S+++G++ A+ Q + K+++AYSS
Sbjct: 118 ATTLKKAGLYLLLRLS--NLFSSSNLISYILLILGILSMLLGSLGALNQTDIKKLLAYSS 175
Query: 779 IAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTD 838
I+HMG ML I+S + + ++I++ F F + L+ + + +
Sbjct: 176 ISHMGFMLIGILS--------LGNYGIIGAIIHLISHGFFSALLFLLAGLIIHRS--GSR 225
Query: 839 ELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
+L + GL P AL++++ + SL+G PP +GF +KF I E
Sbjct: 226 DLRNYGGLFNSMPILALLLLLLLLSLSGLPPLLGFISKFLILE 268
>gnl|CDD|214399 MTH00014, ND4, NADH dehydrogenase subunit 4; Validated.
Length = 452
Score = 201 bits (513), Expect = 4e-56
Identities = 131/359 (36%), Positives = 201/359 (55%), Gaps = 6/359 (1%)
Query: 228 YFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLIIGAF 284
Y L D LS I LT +IT ++IL S I K +M+ LIL+ +++ F
Sbjct: 48 YSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTF 107
Query: 285 CALDGMLFYIFFEATLIPIFIIIGTWG-GSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI 343
A + ++FYIFFEA+LIP +I WG R A+ +YT+ SL +L+S++ ++Y
Sbjct: 108 SASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYT 167
Query: 344 SNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILA 403
+N ++S + + +W IT +AF +K+P++ +H WLP AHVEAP GS+ILA
Sbjct: 168 NNSLSMLMSSMEPPSIYLMNLWWLITI-LAFMVKMPLYTVHLWLPKAHVEAPVAGSMILA 226
Query: 404 AIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
I+LKLG YGLLR S +F + S ++SL+ + SLI + Q D+K LIAYSS+
Sbjct: 227 GILLKLGGYGLLRMS-SLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSV 285
Query: 464 AHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINV 523
HMG +T GI T QGA+ MI+H L SSA+F Y TR + G++++
Sbjct: 286 GHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSL 345
Query: 524 IPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
P ++++ + S AN + P + + E M++ S + + +L + +AAYSL L
Sbjct: 346 FPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFL 404
Score = 49.0 bits (117), Expect = 1e-05
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 18 ASYLLIGFWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAA 77
S ++ + P NL +LI + M K + +H WLP + A ++I A
Sbjct: 169 NSLSMLMSSMEPPSIYLMNL-WWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAG 227
Query: 78 TMVTAGIFMITRMSPLFELSNTALS-IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQ 136
++ G + + RMS LF N +LS I + A L+ I Q D+K +IAYS++
Sbjct: 228 ILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGH 287
Query: 137 LGYMTVG 143
+G MT G
Sbjct: 288 MGLMTAG 294
Score = 40.5 bits (95), Expect = 0.004
Identities = 80/402 (19%), Positives = 150/402 (37%), Gaps = 42/402 (10%)
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYS 579
+ + +F+L N + + + L TAL+ A++
Sbjct: 22 SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFK 81
Query: 580 LCLSKN---------IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSE 630
+ + +I L ++ S +NLL Y+ E + LI +
Sbjct: 82 IFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQ 141
Query: 631 AAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGL 690
A+ I + +S +L I +++ +L + + + ++ L L+ I+
Sbjct: 142 ASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMS----SMEPPSIYLMNLWWLITILAF 197
Query: 691 SFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILL 750
K+ + H+W+P + A + +++L+ + L + Y LL L + IN
Sbjct: 198 MVKMPLYTVHLWLPKAHVEAPVAGSMILAG---ILLKLGGYGLLRMSSLFMHINKSLSAP 254
Query: 751 ILAI--FSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKT-----SHNNLIIFN 803
+I +I ++ I Q + K +IAYSS+ HMGLM I+S + + +I
Sbjct: 255 FSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
Query: 804 SCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFS 863
C S LF L N T T +F+ + + + M F+ S
Sbjct: 315 LCSSALF-----------------ALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLS 357
Query: 864 LA--GFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
A PP+I ++ + I + +LL I L A
Sbjct: 358 AANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAA 399
>gnl|CDD|177172 MTH00110, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 459
Score = 198 bits (506), Expect = 5e-55
Identities = 123/328 (37%), Positives = 190/328 (57%), Gaps = 18/328 (5%)
Query: 262 IKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSN-RSYAAI 320
+KKL Y++ ++L +I F A + ++FYI FEATLIP III WG R A +
Sbjct: 90 TRKKL--YITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGL 147
Query: 321 KFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIW----LFITFFIAFAI 376
F YTL+GSL +L++++Y+ + S N L QL + W L++ +AF +
Sbjct: 148 YFLFYTLVGSLPLLVALLYIQN-NLGSLNFLLL-QLWAQPLPNSWSNNLLWLACMMAFMV 205
Query: 377 KIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSL---PIFPDASYYFSNLI 433
K+P++ +H WLP AHVEAP GS++LAAI+LKLG YG++R ++ P+ +Y F
Sbjct: 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPF---- 261
Query: 434 ITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHAL 493
+ LSL +I S I + Q D+K LIAYSS++HM V + I + T S GA MI+H L
Sbjct: 262 LMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGL 321
Query: 494 ISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
SS +F Y ++ +R + G+ ++P + ++++ SL N +LP T IGE +
Sbjct: 322 TSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFV 381
Query: 554 ILSAVKF-NFCIGVLTSTALIFSAAYSL 580
I+S+ + N I +L ++ +A YSL
Sbjct: 382 IMSSFSWSNITI-ILMGLNMLITALYSL 408
>gnl|CDD|214407 MTH00032, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 669
Score = 200 bits (511), Expect = 5e-54
Identities = 111/199 (55%), Positives = 143/199 (71%), Gaps = 4/199 (2%)
Query: 24 GFWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAG 83
G Y+ PLA A + L+ IG + KSAQ LHTWLPD+MEGPTP SALIHAATMVTAG
Sbjct: 214 GGAYESPLAPFAIIGILLL--IGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAG 271
Query: 84 IFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVG 143
+F++ R PLFE + L II GA+TAFF +G++QND+K++IAYST SQLGYM +
Sbjct: 272 VFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLI 331
Query: 144 LGVS-AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHN-QDIRNMGGLYKYMPITCITSL 201
+G+ ++ V +FHL+ HAFFKALLFLSAGS+I + + QD+R MGGL +P T L
Sbjct: 332 IGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMML 391
Query: 202 IGLLSLVGAPFFSGFYSKD 220
IG S++G P+ +GFYSKD
Sbjct: 392 IGSFSIMGLPYLTGFYSKD 410
Score = 72.3 bits (177), Expect = 1e-12
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 49/320 (15%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F M++++ +N L +++G E + + +L+A I +++AAIK ++ + +
Sbjct: 119 LFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGV 178
Query: 647 LYGISILYGITGTLELQSIFNV-----------IKLNNINCSVLA----LSLLLII--VG 689
+ G+ ++Y G+L+ FN S LA + +LL+I +G
Sbjct: 179 ILGMVLIYKTIGSLDF-LTFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIG 237
Query: 690 LSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKIL 749
S +LG+ H W+PD +G + + L+ + T + ++ R PL L
Sbjct: 238 KSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIR-----SFPLFEKAPLTL 289
Query: 750 LILAIFSLIIGNVSA---ITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCD 806
LI+ IF + +A + Q + K++IAYS+ + +G M+ II I+ SHN
Sbjct: 290 LIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVL-IIGIEGSHN--------- 339
Query: 807 SGLFYIITYIFAILGAFGVIILLKNNT---CNKTDELDI--FIGLHQRNPWCALIMMIFM 861
GLF+++ + F F ++ L + DE D+ GL P+ +M+I
Sbjct: 340 VGLFHLVNHAF-----FKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGS 394
Query: 862 FSLAGFPPTIGFYAKFFIFE 881
FS+ G P GFY+K I E
Sbjct: 395 FSIMGLPYLTGFYSKDLILE 414
Score = 70.8 bits (173), Expect = 3e-12
Identities = 55/180 (30%), Positives = 100/180 (55%), Gaps = 18/180 (10%)
Query: 383 MHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITL-SLIS 440
+HTWLPDA +E PT S ++ AA M+ G + ++R S P+F A + LIIT+ ++
Sbjct: 244 LHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIR-SFPLFEKAP--LTLLIITIFGALT 299
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA----IIQMISHALISS 496
+ + + +VQ D+KK+IAYS+ + +G +M+ I I+G+ + +++HA +
Sbjct: 300 AFFAATVGLVQNDLKKVIAYSTCSQLG------YMVLIIGIEGSHNVGLFHLVNHAFFKA 353
Query: 497 AMFISIGFLYNQMKT--RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII 554
+F+S G + + + + GG+I+ IP +I S + LP +GF + +I+
Sbjct: 354 LLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
Score = 49.6 bits (118), Expect = 8e-06
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG 46
S+N QLF+GWE VG+ SYLL+ FW + A A +KA ++NR+G
Sbjct: 130 SDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVG 174
>gnl|CDD|214453 MTH00196, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 365
Score = 191 bits (487), Expect = 1e-53
Identities = 121/315 (38%), Positives = 173/315 (54%), Gaps = 22/315 (6%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
LG + +IS +N LS+YL +EL +L+L +LIA + + +S+EA +KYF+LG LSSG L+
Sbjct: 3 ALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLF 62
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLAL-SLLLIIVGLSFKLGISPFHMWVPDVY 707
G ++L G TG L L I V+ SV LLIIV L FKL ++PFHMW PDVY
Sbjct: 63 GCALLCGTTGGLHLSYINLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVY 122
Query: 708 QGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQ 767
+GA T LL+ PKL +F I+ + L +N ILLI +FSL +G + A+ Q
Sbjct: 123 EGAPTKTTALLAIVPKLGIFSILVS------IGLNVN---ILLIGGLFSLFVGAIGALNQ 173
Query: 768 YNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827
KR++AYS I HMG +L+ I + F S + L Y+ YI + F +I+
Sbjct: 174 TKIKRLLAYSGIGHMGFVLWGI--------EIGSFESIQASLVYLFIYIIMSICVFSIIL 225
Query: 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ 887
L + + F GL +R P A+ + + S+AG PP +GF K+ I Q
Sbjct: 226 ALNVY----KNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQ 281
Query: 888 KIWLLLLIIMCSLIG 902
+ LL + CS+I
Sbjct: 282 YYLIFLLAVFCSVIA 296
Score = 78.1 bits (193), Expect = 4e-15
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 20/319 (6%)
Query: 293 YIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKS---- 347
Y+ E + +FI+I GS S A +K+F+ + S L L L +
Sbjct: 19 YLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSY 78
Query: 348 FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIML 407
N++ S + + ++ +A K+ + P H W PD + APT+ + L AI+
Sbjct: 79 INLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVP 137
Query: 408 KLGCYGLL-RFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHM 466
KLG + +L L + N+++ L S+ ++ A+ Q IK+L+AYS I HM
Sbjct: 138 KLGIFSILVSIGLNV---------NILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHM 188
Query: 467 GFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPH 526
GFV GI + + SIQ +++ + + +I S SI N K LI F G+ +P
Sbjct: 189 GFVLWGIEIGSFESIQASLVYLFIY-IIMSICVFSIILALNVYKN-LIIEFSGLSRRLPI 246
Query: 527 FSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKN 585
++ + L+ +P GF+G+++I+LS V + + I +L + + Y + + K
Sbjct: 247 LAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVK- 305
Query: 586 IIFVLGQMIMISGNNLLSI 604
I+F ++ +L
Sbjct: 306 ILFFQANSFLLISTKILKK 324
Score = 53.5 bits (129), Expect = 4e-07
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 55 PLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAF 113
P H W PD EG PT +AL+ A + GIF I L + IL IG + +
Sbjct: 113 PFHMWAPDVYEGAPTKTTALL--AIVPKLGIFSI-----LVSIGLNV--NILLIGGLFSL 163
Query: 114 FMGLLGII-QNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGS 172
F+G +G + Q IKR++AYS + +G++ G+ + ++ SI + + F ++ + S
Sbjct: 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSF-ESIQASLVYLFIYIIMSICVFS 222
Query: 173 IIINMKHNQD-IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
II+ + ++ I GL + +PI IT + LS+ G P GF K
Sbjct: 223 IILALNVYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
>gnl|CDD|214436 MTH00151, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 565
Score = 196 bits (500), Expect = 3e-53
Identities = 112/325 (34%), Positives = 161/325 (49%), Gaps = 21/325 (6%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
+ AM KSAQ P +WLP +M PTP SAL+H++T+VTAG+F++ R P S+ S +
Sbjct: 184 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFL 243
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKA 164
LFI +T G+ +ND+K+IIA STLSQLG M LG+ ++++FHL THA FKA
Sbjct: 244 LFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKA 303
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKI 224
LLFL AGSII + QDIR +G L+ +P+T I LSL GAPF SGFYSKD +
Sbjct: 304 LLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKD-LIL 362
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYM-----SAFLILSGL 279
+ L + L + LTA + + + K + ++ L L
Sbjct: 363 ESSLMSPTSLLMV-LLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPML 421
Query: 280 IIGAFCALDGMLFYIFFE------------ATLIPIFIIIGTWGGSNRSYAAIKFFLYTL 327
++ + G L FE LI I++G + +
Sbjct: 422 LLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVK 481
Query: 328 MGSLLMLISMIYLYYISNKSFNILS 352
+ SM +L +S++ LS
Sbjct: 482 LSF--FFSSMWFLSPLSSQPLKSLS 504
Score = 58.3 bits (142), Expect = 2e-08
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 39/306 (12%)
Query: 410 GCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH---- 465
G + L+RF F +S FS+ ++ +SL++++ + A + D+KK+IA S+++
Sbjct: 222 GVFLLIRFF--PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVM 279
Query: 466 -----MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIG-FLYNQMKTRLISNFGG 519
+G +L +F L +HAL + +F+ G +++ T+ I G
Sbjct: 280 MFSLGLGMPSLALFHL------------YTHALFKALLFLCAGSIIHSSSGTQDIRLLGS 327
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK--FNFCIGVLTSTALIFSAA 577
+ +P S I SL+ C P SGF + +I+ S++ + + +L + +A
Sbjct: 328 LFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTAL 387
Query: 578 YSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA----SQKNNIFSSEAAI 633
YS LS +++ + +S + Y+ L ++ L+L LI FS E
Sbjct: 388 YSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEE--- 444
Query: 634 KYFILGILSSGF--MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLI--IVG 689
F L + + + S ++KL+ S+ LS L +
Sbjct: 445 --FFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLSFFFSSMWFLSPLSSQPLKS 502
Query: 690 LSFKLG 695
LS KL
Sbjct: 503 LSLKLS 508
Score = 38.7 bits (91), Expect = 0.017
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 26/161 (16%)
Query: 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI----ISIKTSHNNLIIFN 803
LL +++ +L++ +SA + + K++IA S+++ +G+M+FS+ S+
Sbjct: 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSL----------- 290
Query: 804 SCDSGLFYIITYIFAILGAF---GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIF 860
LF++ T+ F G II +++ D + + L P + + I
Sbjct: 291 ----ALFHLYTHALFKALLFLCAGSII---HSSSGTQD-IRLLGSLFLSLPLTSGCLNIS 342
Query: 861 MFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLI 901
SL G P GFY+K I E + L++L++ +
Sbjct: 343 SLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVG 383
>gnl|CDD|214444 MTH00165, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 573
Score = 196 bits (501), Expect = 3e-53
Identities = 141/431 (32%), Positives = 205/431 (47%), Gaps = 71/431 (16%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+S NL + LGW+ +G+ SY L+ +Y + A + L NRIG
Sbjct: 103 ISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF 161
Query: 47 ----------------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAAT 78
AM KSAQ P +WLP +M PTP SAL+H++T
Sbjct: 162 GSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSST 221
Query: 79 MVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLG 138
+VTAG++++ R + L S +L I +T F GL + D+K+IIA STLSQLG
Sbjct: 222 LVTAGVYLLIRFNNLLFSSFF-SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLG 280
Query: 139 YMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCI 198
M L + ++ FHL+THA FKALLFL AGSII NM ++QDIR MGGL +MP+T
Sbjct: 281 LMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSS 340
Query: 199 TSLIGLLSLVGAPFFSGFYSKDK--KKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIII 256
I LSL G PF SGFYSKD + + + N + F L + LT + +I
Sbjct: 341 CFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFF----LFFFSTGLTVSYSFRLI 396
Query: 257 LISLDIKKKLAEYMS----AFLILSGLIIGAFCALDG-------------MLFYIFFEAT 299
S+ L + + +L +I+ F ++ G M+ F+
Sbjct: 397 YYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKL 456
Query: 300 LIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLL--MLISMIYLYYISNK--SFNILSWHQ 355
L I++G W G S ++ + L +L L L SM ++ ++S S+ L+
Sbjct: 457 LTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGS 516
Query: 356 LSITKIEQIWL 366
LS+ +Q W
Sbjct: 517 LSLKSFDQGWS 527
Score = 58.6 bits (143), Expect = 1e-08
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 34/303 (11%)
Query: 328 MGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWL 387
+G + +L+S+ ++ ++ S+N + + E + + + +A K P +WL
Sbjct: 146 IGDVAILLSIAWM--MNFGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWL 203
Query: 388 PDAHVEAPT------EGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISI 441
P A + APT S ++ A G Y L+RF+ +F S +FS ++ +SL+++
Sbjct: 204 PAA-MAAPTPVSALVHSSTLVTA-----GVYLLIRFNNLLF---SSFFSKFLLLISLLTM 254
Query: 442 IYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQG---AIIQMISHALISSAM 498
L A + D+KK+IA S+++ +G M++ +S+ A +++HAL + +
Sbjct: 255 FMAGLGANFEFDLKKIIALSTLSQLG------LMMSILSLGFPKLAFFHLLTHALFKALL 308
Query: 499 FISIGFLYNQMK-TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII--L 555
F+ G + + M ++ I GG+ N +P S F I +L+ C P SGF + +I+ +
Sbjct: 309 FLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMV 368
Query: 556 SAVKFNFCIGVLTSTALIFSAAYSL-----CLSKNIIFVLGQMIMISGNNLLSIYLGLEL 610
S NF I L + + +YS +S + + +L + L
Sbjct: 369 SMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLF 428
Query: 611 MSL 613
MS+
Sbjct: 429 MSI 431
Score = 34.7 bits (81), Expect = 0.34
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 28/149 (18%)
Query: 744 NWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFN 803
+ K LL++++ ++ + + A +++ K++IA S+++ +GLM SI+S+
Sbjct: 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSL----------G 289
Query: 804 SCDSGLFYIITY------IFAILGAFGVIILLKNNTCNKTDELDI--FIGLHQRNPWCAL 855
F+++T+ +F L A +I + N+ DI GL P +
Sbjct: 290 FPKLAFFHLLTHALFKALLF--LCAGSIIHNMSNS-------QDIRFMGGLSNFMPLTSS 340
Query: 856 IMMIFMFSLAGFPPTIGFYAKFFIFEKIF 884
I SL GFP GFY+K I E +
Sbjct: 341 CFNISNLSLCGFPFLSGFYSKDLILEMVS 369
>gnl|CDD|177186 MTH00127, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 459
Score = 189 bits (482), Expect = 6e-52
Identities = 129/365 (35%), Positives = 196/365 (53%), Gaps = 23/365 (6%)
Query: 233 YFLGIDGLSLWFIPLTAFITLIIIL-----ISLDIKKKLAEYMSAFLILSGLIIGAFCAL 287
++ D LS + LT ++ ++IL + + + Y++ L +I AF A
Sbjct: 55 LYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRQRMYITLLTSLQIFLILAFGAT 114
Query: 288 DGMLFYIFFEATLIPIFIIIGTWGG-SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK 346
+ ++FY+ FEATLIP III WG + R A F YTL GSL +L++++ L
Sbjct: 115 EIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQ----N 170
Query: 347 SFNILSWHQLSITKIEQIWLFITFF------IAFAIKIPIWPMHTWLPDAHVEAPTEGSV 400
S LS L ++ Q+ + +AF +K+P++ +H WLP AHVEAP GS+
Sbjct: 171 STGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSM 230
Query: 401 ILAAIMLKLGCYGLLRFSL---PIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKL 457
+LAA++LKLG YG++R + P+ + SY F I L+L II I + Q D+K L
Sbjct: 231 VLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF----IILALWGIIMTGSICLRQTDLKSL 286
Query: 458 IAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNF 517
IAYSS++HMG V GI + T GA+I MI+H L SSA+F Y + +R +
Sbjct: 287 IAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLA 346
Query: 518 GGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAA 577
G+ ++P + ++ I SLAN +LP +GE MII S ++ LT + +A
Sbjct: 347 RGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAG 406
Query: 578 YSLCL 582
YSL +
Sbjct: 407 YSLYM 411
Score = 37.2 bits (86), Expect = 0.050
Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
+ + K + +H WLP + A +++ AA ++ G + + RM + + LS
Sbjct: 202 LAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYP 261
Query: 105 LFIGAITAFFM-GLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHA 160
I A+ M G + + Q D+K +IAYS++S +G + G+ + +T ++ ++ H
Sbjct: 262 FIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHG 321
Query: 161 FFKALLFLSA 170
+ LF A
Sbjct: 322 LTSSALFCLA 331
Score = 36.1 bits (83), Expect = 0.10
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 693 KLGISPFHMWVPDVYQGASIIITLLLSTTP-KLSLFVIIYRLLIKCLLPLVINWQKILLI 751
K+ + H+W+P + A I +++L+ KL + ++ +++ L PL +I
Sbjct: 207 KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVM--LDPLTKELSYPFII 264
Query: 752 LAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSII 790
LA++ +I+ + Q + K +IAYSS++HMGL+ I+
Sbjct: 265 LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGIL 303
>gnl|CDD|176990 CHL00049, ndhB, NADH dehydrogenase subunit 2.
Length = 494
Score = 189 bits (481), Expect = 2e-51
Identities = 115/331 (34%), Positives = 187/331 (56%), Gaps = 19/331 (5%)
Query: 560 FNFCIGVLTSTALIFSAAYSLC----LSKNIIFVL----GQMIMISGNNLLSIYLGLELM 611
F F I + ++ + S Y C +++ ++FVL G M + N+L++I++ LE +
Sbjct: 84 FQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECL 143
Query: 612 SLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT-GTLELQSIFN-VI 669
SL +L K ++ S+EA +KY ++G SS ++YG S LYG++ G +ELQ I N +I
Sbjct: 144 SLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLI 203
Query: 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVI 729
N ++++L+ I VG+ FKL ++PFH W PDVY+G+ + LS T K++ +
Sbjct: 204 NTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASAL 263
Query: 730 IYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI 789
R+ W +L ILAI S+I+GN+ AITQ + KRM+AYSSI +G ++ I
Sbjct: 264 ATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI 323
Query: 790 ISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQR 849
I ++ + S + Y++ YIF LG F I+L T TD + + GL+ +
Sbjct: 324 IVGDSN-------DGYASMITYMLFYIFMNLGTFACIVLFGLRT--GTDNIRDYAGLYTK 374
Query: 850 NPWCALIMMIFMFSLAGFPPTIGFYAKFFIF 880
+P+ AL + + + SL G PP GF+ K ++F
Sbjct: 375 DPFLALSLALCLLSLGGIPPLAGFFGKLYLF 405
Score = 68.9 bits (169), Expect = 8e-12
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 50 KSAQFPLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIG 108
K + P H W PD EG PTP A + + V A F S+ ++L I
Sbjct: 227 KLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEIL 286
Query: 109 AITAFFMG-LLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLF 167
AI + +G L+ I Q +KR++AYS++ Q+GY+ +G+ V ++T+ F +
Sbjct: 287 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMN 346
Query: 168 LSAGSIII--NMKHNQD-IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
L + I+ ++ D IR+ GLY P ++ + LLSL G P +GF+ K
Sbjct: 347 LGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
Score = 49.6 bits (119), Expect = 7e-06
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 367 FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDAS 426
FIT I F K+ + P H W PD + +PT L+ R F +S
Sbjct: 219 FITVGIGF--KLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSS 276
Query: 427 YYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGI 473
+ L+ L+++S+I +LIA+ Q +K+++AYSSI +G+V +GI
Sbjct: 277 NEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI 323
>gnl|CDD|235044 PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase subunit 2;
Provisional.
Length = 513
Score = 181 bits (461), Expect = 1e-48
Identities = 105/314 (33%), Positives = 175/314 (55%), Gaps = 15/314 (4%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG M + L+ I++ LE +S+ +L K + S+EAA+KY ++G SS LYG
Sbjct: 121 LGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYG 180
Query: 650 ISILYGIT-GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
S+LYG++ G+ +L +I + L LAL+L+ +I G++FK+ PFH W PDVY+
Sbjct: 181 SSLLYGLSGGSTQLSAI--ALALITSPSLGLALALVFVIAGIAFKISAVPFHQWTPDVYE 238
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
G+ + LS K + F + RLL+ W+ + LAI S+++GNV A+ Q
Sbjct: 239 GSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQT 298
Query: 769 NFKRMIAYSSIAHMG-LMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII 827
+ KRM+AYSSI G +M+ + + + +++ FY++ Y+F LGAF +I
Sbjct: 299 SMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMV---------FYLLAYLFMNLGAFACVI 349
Query: 828 LLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ 887
L T TD++ + GL+Q++P L + + + SL G PP GF+ K ++F ++
Sbjct: 350 LFSLRT--GTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAG 407
Query: 888 KIWLLLLIIMCSLI 901
L+L+ ++ S+I
Sbjct: 408 LYLLVLVGLVTSVI 421
Score = 54.7 bits (132), Expect = 2e-07
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 50 KSAQFPLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIG 108
K + P H W PD EG PTP A + + I + F + ++
Sbjct: 223 KISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTAL 282
Query: 109 AITAFFMG-LLGIIQNDIKRIIAYSTLSQLGYMTVGL--GVSA-YTVSIFHLMTHAFFKA 164
AI + +G ++ + Q +KR++AYS++ Q G++ +GL G A Y +F+L+ + F
Sbjct: 283 AILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYLFMNL 342
Query: 165 LLFLSAGSIIINMKHNQD-IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
F A I+ +++ D I + GLY+ P+ + + LLSL G P +GF+ K
Sbjct: 343 GAF--ACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
Score = 49.3 bits (118), Expect = 1e-05
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 18/254 (7%)
Query: 234 FLGI---DGLSLWFIPLTAFITLIIILISLDIKKK----LAEYMSAFLILSGLIIGAFC- 285
FLG D LS+ F + A TL+ +L+S ++ L E+ + ++L+ + G F
Sbjct: 70 FLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAA--ILLTATLGGMFLS 127
Query: 286 -ALDGMLFYIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYI 343
A + ++ +I E I +++ G RS AA+K+ L S + L LY +
Sbjct: 128 GATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGL 187
Query: 344 SNKSFN---ILSWHQLSITKIEQIWL-FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGS 399
S S I S + + L F+ IAF KI P H W PD + +PT
Sbjct: 188 SGGSTQLSAIALALITSPSLGLALALVFVIAGIAF--KISAVPFHQWTPDVYEGSPTPVV 245
Query: 400 VILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIA 459
L+ G +R + FP + L L+++S++ +++A+ Q +K+++A
Sbjct: 246 AFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLA 305
Query: 460 YSSIAHMGFVTLGI 473
YSSI GFV +G+
Sbjct: 306 YSSIGQAGFVMIGL 319
>gnl|CDD|177245 MTH00199, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 460
Score = 177 bits (451), Expect = 1e-47
Identities = 119/354 (33%), Positives = 196/354 (55%), Gaps = 33/354 (9%)
Query: 548 IGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLG 607
I + +II+ ++ T + ++ L +I LG ++++S N LSIYL
Sbjct: 70 ISKIIIIIGSISILLMGSGETILSEGGQSSPIL----ILIVALGSLLLVSSINWLSIYLA 125
Query: 608 LELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFN 667
+EL +LTL +L+A ++++ +S+EA +KYF+LG +SSG L+G ++LYG+TG +Q I N
Sbjct: 126 IELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGI-N 184
Query: 668 VIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLF 727
I ++ +LI + L FKL +PFHMW PDVY+GA I T LL+T PK+ +F
Sbjct: 185 SILTGDV-------GKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVF 237
Query: 728 VIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLF 787
I+ + + V N ++LI A+ S+I G + A+ Q KR++AYS I HMG +LF
Sbjct: 238 SILVQ------IGPVTN---VVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILF 288
Query: 788 SIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLH 847
++I + F S + L Y+I Y+ + +F +I+ LK + GL
Sbjct: 289 G-VAIGS-------FESIQASLIYMIIYVIMSICSFSIILSLK----LTKGLIVEVSGLS 336
Query: 848 QRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLI 901
++NP AL + + S+AG PP GF +K+ I + + ++ ++ S+I
Sbjct: 337 RKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVI 390
Score = 70.8 bits (174), Expect = 1e-12
Identities = 89/364 (24%), Positives = 171/364 (46%), Gaps = 28/364 (7%)
Query: 202 IGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFI---TLIIILI 258
IG+L L+G S + + L + W I I ++ I+L+
Sbjct: 31 IGVLLLIG--LIVELNSLNLFQSDKVLDGTNGLLLTNS---WIIISKIIIIIGSISILLM 85
Query: 259 SLDIKKKLAEYMSAFLILSGLIIGAF---CALDGMLFYIFFEATLIPIFIIIGTWGGSNR 315
S+ +++ + +G+ +++ + Y+ E + +FI++ S
Sbjct: 86 GSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAY 145
Query: 316 SY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAF 374
S A +K+F+ + S L L LY ++ ++ +I + + + +I IT I+
Sbjct: 146 STEAGLKYFVLGAVSSGLFLFGCALLYGLTGET-SIQGINSILTGDVGKI--LIT--ISL 200
Query: 375 AIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLII 434
K+ P H W PD + APT + L A + K+G + +L P+ +N+++
Sbjct: 201 LFKLSAAPFHMWAPDVYEGAPTI-TTALLATVPKIGVFSILVQIGPV--------TNVVL 251
Query: 435 TLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALI 494
+++SIIY ++ A+ Q IK+L+AYS I HMGF+ G+ + + SIQ ++I MI + ++
Sbjct: 252 ICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIM 311
Query: 495 SSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII 554
S F I L ++ LI G+ P ++ + L+ +P +GF+ +++I+
Sbjct: 312 SICSFSIILSL--KLTKGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
Query: 555 LSAV 558
LS V
Sbjct: 370 LSGV 373
Score = 41.5 bits (98), Expect = 0.002
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 55 PLHTWLPDSMEG-PTPASALIHAATMVTAGIFMI-TRMSPLFELSNTALSIILFIGAITA 112
P H W PD EG PT +AL+ AT+ G+F I ++ P+ ++L ++
Sbjct: 208 PFHMWAPDVYEGAPTITTALL--ATVPKIGVFSILVQIGPVTN-------VVLICAVLSI 258
Query: 113 FFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYT--------VSIFHLMTHAFFKA 164
+ + + Q IKR++AYS + +G++ G+ + ++ + I+ +M+ F
Sbjct: 259 IYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSI 318
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+L L + I + GL + P+ +T + LS+ G P +GF SK
Sbjct: 319 ILSLKLTKGL--------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSK 365
>gnl|CDD|215930 pfam00459, Inositol_P, Inositol monophosphatase family.
Length = 269
Score = 171 bits (434), Expect = 1e-47
Identities = 67/248 (27%), Positives = 129/248 (52%), Gaps = 8/248 (3%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFL-- 982
A++ ARK+ ++ + + + V +KA+E++I + L +P + +
Sbjct: 9 AVELARKAGEVLREAFSNDLTVEEKTSGSNDLVTAADKAAEELILEALAALFPGHPIIGE 68
Query: 983 --IKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRND 1040
++ WIIDP+D NF PQ+ +SI L + V+Y P +
Sbjct: 69 ETGAIGGTELT-DDGPTWIIDPIDGTKNFIRGIPQFAVSIGLLVNGEPVLGVVYAPALGE 127
Query: 1041 LFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQI--ITKCKNL 1098
L++A KG GA+LN +++ V+ +++AL+ T F + ++ + K+ + + + +
Sbjct: 128 LYSAAKGKGAFLNGQKLPVSGAPLLSNALLVTLFGSSSVPDTSDATKLANVLSLVRAPGV 187
Query: 1099 RNIGTSSLNLAYVASGKLDGFFEKG-LKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGD 1157
R++G+++L L VA G+ D + E G LKPW+IAAG ++ E+GG++++ G L
Sbjct: 188 RSVGSAALKLCLVAEGRADAYIEFGRLKPWDIAAGVAILREAGGVVTDLDGGPLDLLKRR 247
Query: 1158 IVAGNQKI 1165
++A N K+
Sbjct: 248 VIAANPKV 255
>gnl|CDD|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains. This
family of phosphatases is dependent on bivalent metal
ions such as Mg++, and many members are inhibited by Li+
(which is thought to displace a bivalent ion in the
active site). Substrates include
fructose-1,6-bisphosphate, inositol poly- and
monophosphates, PAP and PAPS,
sedoheptulose-1,7-bisphosphate and probably others.
Length = 238
Score = 167 bits (426), Expect = 7e-47
Identities = 78/239 (32%), Positives = 135/239 (56%), Gaps = 6/239 (2%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
A+KA R++ +I E + +K + V + A+E++I +L +P L +
Sbjct: 4 ALKAVREAGALILEAFGEELTVE-TKKGDGDLVTEADLAAEELIVDVLKALFPDDGILGE 62
Query: 985 KSNYLTNFEN-ENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFT 1043
+ N + +W+IDP+D TNF P + +SIAL + + VIYDP+ ++L+
Sbjct: 63 EGGGSGNVSDGGRVWVIDPIDGTTNFVAGLPNFAVSIALYEDGKPVLGVIYDPMLDELYY 122
Query: 1044 AIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGT 1103
A +G GA+LN K++ ++K +NDAL+ T+ S S A + ++ + +R G+
Sbjct: 123 AGRGKGAFLNGKKLPLSKDTPLNDALLSTNASML---RSNRAAVLASLVNRALGIRIYGS 179
Query: 1104 SSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEK-NYLYTGDIVAG 1161
+ L+LAYVA+G+LD + GL PW+ AAG+L++ E+GGI+++ GE + L I+A
Sbjct: 180 AGLDLAYVAAGRLDAYLSSGLNPWDYAAGALIVEEAGGIVTDLDGEPLDTLNRSGIIAA 238
>gnl|CDD|237157 PRK12648, PRK12648, putative monovalent cation/H+ antiporter
subunit A; Reviewed.
Length = 948
Score = 182 bits (464), Expect = 8e-47
Identities = 96/298 (32%), Positives = 147/298 (49%), Gaps = 56/298 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKP---------LAITA---------------- 35
+S NL L + WE+ ++S+LLIG+W+ + L +T
Sbjct: 125 LSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHI 184
Query: 36 ----NLKAFLINR-----------------IGAMAKSAQFPLHTWLPDSMEGPTPASALI 74
+L L +GA KSAQFP H WLP +M PTP SA +
Sbjct: 185 VGSYDLDVVLAAGDLIRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYL 244
Query: 75 HAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
H+ATMV AG+F++ R+ P+ + I+ G IT + Q+D+K ++AYST+
Sbjct: 245 HSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTI 304
Query: 135 SQLGYMTV--GLGVSAYTVS-IFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYK 191
S LG +T+ GLG V+ IFH++ HA FKA LF++AG II + +D+R + GL +
Sbjct: 305 SHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAG-IIDHETGTRDMRRLSGLRR 363
Query: 192 YMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTA 249
MPIT +++ ++ G P +GF SK+ +F + G W +P+ A
Sbjct: 364 LMPITATLAMVAAAAMAGVPLLNGFLSKEM------FFAETLDTHLLGSLDWLLPVAA 415
Score = 72.9 bits (180), Expect = 7e-13
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 382 PMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
P H WLP A + APT S L +A M+K G + L R P+ +F ++ LI+
Sbjct: 225 PFHFWLPHA-MAAPTPVSAYLHSATMVKAGVFLLARLW-PVLAGTEEWF-WIVGGAGLIT 281
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFI 500
++ + A+ Q D+K L+AYS+I+H+G +TL + + + ++ AI +I+HA +++F+
Sbjct: 282 LLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFM 341
Query: 501 SIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK- 559
+ G + ++ TR + G+ ++P + ++ + A +P +GF+ + M +
Sbjct: 342 AAGIIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDT 401
Query: 560 -----FNFCIGVLTSTALIFSAAYSL 580
++ + V + A FS AYSL
Sbjct: 402 HLLGSLDWLLPVAATLAGAFSVAYSL 427
Score = 34.0 bits (79), Expect = 0.54
Identities = 13/38 (34%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 754 IFSLIIGNVSAITQYNFKRMIAYSSIAHMGL--MLFSI 789
+ +L++G A+ Q++ K ++AYS+I+H+GL +L +
Sbjct: 279 LITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGL 316
>gnl|CDD|177252 MTH00209, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 564
Score = 175 bits (445), Expect = 3e-46
Identities = 102/256 (39%), Positives = 143/256 (55%), Gaps = 40/256 (15%)
Query: 4 NLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG----------------- 46
NL L LGW+ +G+ SYLL+ + Y +++A + L NR+G
Sbjct: 104 NLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNW 162
Query: 47 ----------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGI 84
AM KSAQ P WLP +M PTP SAL+H++T+VTAG+
Sbjct: 163 NIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGV 222
Query: 85 FMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL 144
+++ R P S +L +G++T + +++D+K+IIA STLSQLG M L
Sbjct: 223 YLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSL 282
Query: 145 GVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGL 204
G++ ++ FHL+THA FKALLF+ AG+II + H+QDIR +G L+ MPIT I I
Sbjct: 283 GLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIAN 342
Query: 205 LSLVGAPFFSGFYSKD 220
LSL G PF +GFYSKD
Sbjct: 343 LSLCGIPFLAGFYSKD 358
Score = 55.0 bits (133), Expect = 2e-07
Identities = 95/403 (23%), Positives = 178/403 (44%), Gaps = 44/403 (10%)
Query: 201 LIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL 260
L L V +F + + + ++ +I + L ID +SL F + I+ ++ S
Sbjct: 14 LFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFS- 72
Query: 261 DIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGG-------- 312
++ F++L L I + M F IF I +++G W G
Sbjct: 73 TSYMAGEKFKKRFILLVLLFILS------MNFLIFVPNL---ITLLLG-WDGLGLVSYLL 122
Query: 313 ------SNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWL 366
S A + L +G L+++S+ ++ N W+ + +
Sbjct: 123 VIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN-------WNIFYLNFNSNLGS 175
Query: 367 FITFFIAFA--IKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFP 423
I+ I A K P WLP A + APT S ++ ++ ++ G Y L+RF +F
Sbjct: 176 VISVLIVLAAMTKSAQIPFSAWLP-AAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLF- 233
Query: 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQG 483
+S +FS ++ L ++ + S+ A V+ D+KK+IA S+++ +G L + L +
Sbjct: 234 -SSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLG---LMMCSLGLNQPEL 289
Query: 484 AIIQMISHALISSAMFISIG-FLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLP 542
A +I+HAL + +FI G +++ ++ I G + +P S+ I +L+ C +P
Sbjct: 290 AFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIP 349
Query: 543 GTSGFIGEFMIILSAV--KFNFCIGVLTSTALIFSAAYSLCLS 583
+GF + +I+ S + +L + +AAYS+ LS
Sbjct: 350 FLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLS 392
Score = 36.2 bits (84), Expect = 0.10
Identities = 67/315 (21%), Positives = 138/315 (43%), Gaps = 23/315 (7%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
++F+L +I NL+++ LG + + L +L+ +N+ S + + +
Sbjct: 90 LLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALL 149
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
+L +L +IF N N ++ ++ +LI++ K PF W+P
Sbjct: 150 ILSIAWMLM-----HGNWNIF----YLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPA 200
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
+ + L+ S+T + ++ R L + LL+L + ++ ++SA
Sbjct: 201 AMAAPTPVSALVHSSTLVTAGVYLLIRFFPS--LFSSPFFSMSLLLLGSLTTLMASMSAN 258
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825
+ + K++IA S+++ +GLM+ S+ + L F+ LF + +I A G
Sbjct: 259 VESDLKKIIALSTLSQLGLMMCSLGLNQP---ELAFFHLITHALFKALLFICA-----GN 310
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
II ++ ++ + L + P ++ + I SL G P GFY+K I E + E
Sbjct: 311 IIHSHGHS----QDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLE 366
Query: 886 TQKIWLLLLIIMCSL 900
+ + L+++ S
Sbjct: 367 SNMPIMTLILMFLST 381
>gnl|CDD|164753 MTH00207, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 572
Score = 174 bits (442), Expect = 8e-46
Identities = 104/256 (40%), Positives = 144/256 (56%), Gaps = 43/256 (16%)
Query: 5 LFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG------------------ 46
L L LGW+ +G+ S++L+ +Y P ++ A + L NRIG
Sbjct: 110 LMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWS 168
Query: 47 --------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFM 86
AM KSAQ P +WLP +M PTP SAL+H++T+VTAG+F+
Sbjct: 169 ITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFL 228
Query: 87 ITRMSPLFELSNTAL--SIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL 144
+ R P LS+T +L ++T GL + + D+K+IIA STLSQLG M L
Sbjct: 229 LIRFYPF--LSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASL 286
Query: 145 GVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGL 204
G+ +++FHL+THA FKALLF+ AGS+I + H+QD+R MG L MP+T LI
Sbjct: 287 GLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIAN 346
Query: 205 LSLVGAPFFSGFYSKD 220
L+L G+PF SGFYSKD
Sbjct: 347 LALCGSPFLSGFYSKD 362
Score = 54.8 bits (132), Expect = 2e-07
Identities = 58/221 (26%), Positives = 120/221 (54%), Gaps = 14/221 (6%)
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFP 423
++ ++ IA K P +WLP A + APT S ++ ++ ++ G + L+RF F
Sbjct: 180 YIALSIMIAAMTKSAQMPFSSWLP-AAMAAPTPVSALVHSSTLVTAGVFLLIRFY--PFL 236
Query: 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV--TLGIFMLTKISI 481
++Y+F+ ++ + ++++ L AM + D+KK+IA S+++ +G + +LG+ M
Sbjct: 237 SSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKL--- 293
Query: 482 QGAIIQMISHALISSAMFISIG-FLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCS 540
A+ +I+HAL + +F+ G +++ ++ + G + N +P + +I +LA C
Sbjct: 294 --ALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCG 351
Query: 541 LPGTSGFIGEFMIILSAVKF--NFCIGVLTSTALIFSAAYS 579
P SGF + +I+ S++ + N + ++ A +AAYS
Sbjct: 352 SPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYS 392
Score = 39.4 bits (92), Expect = 0.011
Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 747 KILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCD 806
LL+ A ++++ +SA+T+ + K++IA S+++ +G+M+ S+ L +F+
Sbjct: 244 PALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMM---ASLGLGMPKLALFHLIT 300
Query: 807 SGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAG 866
LF + ++ A G +I ++ + + +L L + P ++I +L G
Sbjct: 301 HALFKALLFVCA-----GSLI----HSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCG 351
Query: 867 FPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCS 899
P GFY+K I E L++L+I +
Sbjct: 352 SPFLSGFYSKDLILESSLFYPHNSLMILMIFLA 384
>gnl|CDD|223724 COG0651, HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+
antiporter, MnhD subunit [Energy production and
conversion / Inorganic ion transport and metabolism].
Length = 504
Score = 172 bits (438), Expect = 1e-45
Identities = 121/404 (29%), Positives = 212/404 (52%), Gaps = 13/404 (3%)
Query: 198 ITSLIGLLSLVGAPFFS--GFYSKDKKKIWIDYF--NIYYFLGIDGLSLWFIPLTAFITL 253
+ LL +G S GF + + L D LS F+ + A + L
Sbjct: 30 AKRFLALLGALGLLLLSILGFLEVGGPVGGLGGWLAPFGIVLAADPLSAIFLLIIALVGL 89
Query: 254 IIILISLDIKKKLAE---YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTW 310
+ L S+ + E Y L+L ++GAF D Y+FFE + + ++ +
Sbjct: 90 LASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSSYFLVAHY 149
Query: 311 GGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNK-SFNILSWHQLS-ITKIEQIWLF 367
GG R A K+ + +G+LL+LI + LY + +F ++ S + I F
Sbjct: 150 GGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKLSSELDPGLGIAAF 209
Query: 368 ITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP--DA 425
+ I F +K ++P+H WLPDAH EAP+ S +L+ +++K+G YG+LR +FP
Sbjct: 210 LLLLIGFGVKAGLFPLHFWLPDAHSEAPSPVSALLSGVLVKVGVYGILRILYLVFPLLGG 269
Query: 426 SYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAI 485
+Y + NL+I L +++I++ L A++Q DIK+L+AYS+++ MG++ LG+ + T + + GAI
Sbjct: 270 AYLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQMGYILLGLGIGTPLGLAGAI 329
Query: 486 IQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTS 545
+++HAL+ + +F+ G + + TR + GG+ +P +V F+I +L+ LP +
Sbjct: 330 FHLLNHALVKALLFLGAGAVLYRTGTRDLEKLGGLAKRMPLTAVAFLIGALSLAGLPPFN 389
Query: 546 GFIGEFMIILSAVKFN-FCIGVLTSTALIFSAAYSLCLSKNIIF 588
GFI +F++I + K N ++ ALI A+ + +S IF
Sbjct: 390 GFISKFLLIQALFKANALLAILIILAALILLASLATFISLARIF 433
Score = 141 bits (357), Expect = 3e-35
Identities = 96/411 (23%), Positives = 182/411 (44%), Gaps = 35/411 (8%)
Query: 512 RLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTA 571
F ++ + + + F + G G++ F I+L+A + ++ +
Sbjct: 28 LKAKRFLALLGALGLLLLSILGFLEVGGPVGGLGGWLAPFGIVLAADPLSAIFLLIIALV 87
Query: 572 LIFSAAYSLCLSK-----------NIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA 620
+ ++ YS+ + ++ + G + +L ++Y+ E+M+L+ L+A
Sbjct: 88 GLLASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSSYFLVA 147
Query: 621 SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLA 680
+ A KY ILG + + +L G+ +LY TGTL I + + ++ +
Sbjct: 148 HYGGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKL-SSELDPGLGI 206
Query: 681 LSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLP 740
+ LL+++G K G+ P H W+PD + A ++ LLS I R+L
Sbjct: 207 AAFLLLLIGFGVKAGLFPLHFWLPDAHSEAPSPVSALLSGVLVKVGVYGILRILYLVFPL 266
Query: 741 LVIN--WQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNN 798
L W +L+ L I +++ G + A+ Q + KR++AYS+++ MG +L + I T
Sbjct: 267 LGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQMGYILLG-LGIGTPLGL 325
Query: 799 LIIFNSCDSGLFYIITYIFAILGAF---GVIILLKNNTCNKTDELDIFIGLHQRNPWCAL 855
+F+++ + F G ++ T +L+ GL +R P A+
Sbjct: 326 AG-------AIFHLLNHALVKALLFLGAGAVLYRT-----GTRDLEKLGGLAKRMPLTAV 373
Query: 856 IMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK-----IWLLLLIIMCSLI 901
+I SLAG PP GF +KF + + +F+ I L LI++ SL
Sbjct: 374 AFLIGALSLAGLPPFNGFISKFLLIQALFKANALLAILIILAALILLASLA 424
Score = 124 bits (314), Expect = 8e-30
Identities = 94/314 (29%), Positives = 150/314 (47%), Gaps = 65/314 (20%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGA------------- 47
++ +LF L++ +EI+ ++SY L+ + + +A K ++ IG
Sbjct: 124 LTGDLFNLYVFFEIMTLSSYFLVAHYGGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAA 183
Query: 48 ---------------------------------MAKSAQFPLHTWLPDSM-EGPTPASAL 73
K+ FPLH WLPD+ E P+P SAL
Sbjct: 184 TGTLNFADIALKLSSELDPGLGIAAFLLLLIGFGVKAGLFPLHFWLPDAHSEAPSPVSAL 243
Query: 74 IHAATMVTAGIFMITR----MSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRII 129
+ +V G++ I R + PL + ++++ +G +T F L ++Q DIKR++
Sbjct: 244 LSG-VLVKVGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLL 302
Query: 130 AYSTLSQLGYMTVGLGV---SAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNM 186
AYST+SQ+GY+ +GLG+ +IFHL+ HA KALLFL AG+++ +D+ +
Sbjct: 303 AYSTVSQMGYILLGLGIGTPLGLAGAIFHLLNHALVKALLFLGAGAVLY-RTGTRDLEKL 361
Query: 187 GGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIP 246
GGL K MP+T + LIG LSL G P F+GF SK F + L L +
Sbjct: 362 GGLAKRMPLTAVAFLIGALSLAGLPPFNGFISK---------FLLIQALFKANALLAILI 412
Query: 247 LTAFITLIIILISL 260
+ A + L+ L +
Sbjct: 413 ILAALILLASLATF 426
>gnl|CDD|237155 PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A;
Reviewed.
Length = 800
Score = 177 bits (451), Expect = 1e-45
Identities = 101/283 (35%), Positives = 144/283 (50%), Gaps = 63/283 (22%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLIN----------------- 43
+S+NL L+L WE+ ++S+LLI +WY++ + K+ LI
Sbjct: 128 LSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIM 187
Query: 44 -----------------------------RIGAMAKSAQFPLHTWLPDSMEGPTPASALI 74
+GA KSAQFP + WLPD+ME PTP SA +
Sbjct: 188 TGSFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYL 247
Query: 75 HAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
H+ATMV AGI+++ R +P+F S + +G IT F+ L + Q D+K I+A+ST+
Sbjct: 248 HSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTV 307
Query: 135 SQLGYMTVGLGVS----------------AYTVSIFHLMTHAFFKALLFLSAGSIIINMK 178
SQLG + LG+ A T +IFHL+ HA FK LF+ G I+ +
Sbjct: 308 SQLGLIMSLLGIGAASLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFMIVG-IVDHET 366
Query: 179 HNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDK 221
+DIR +GGL MPIT +LIG LS+ G P F+GF SK+
Sbjct: 367 GTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEM 409
Score = 93.1 bits (232), Expect = 4e-19
Identities = 112/367 (30%), Positives = 186/367 (50%), Gaps = 37/367 (10%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL----DIKKKLAEYMSAFLILSGLI 280
WI I + L +DGLSL F L I +++L S+ K++L + L+ G +
Sbjct: 64 WIPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGNFYVYLLLFMGAM 123
Query: 281 IGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIY 339
+G + + ++ Y+F+E T I F++I W S Y A K L T+ G L ML I
Sbjct: 124 LGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFIL 183
Query: 340 LYYISNKSFNILSW-HQLSITKIEQIWLFITFFIAFAI----KIPIWPMHTWLPDAHVEA 394
LY ++ SF+I I+ LFI I + K +P + WLPDA +EA
Sbjct: 184 LYIMTG-SFSIREMIANADE--IQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDA-MEA 239
Query: 395 PTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
PT S L +A M+K G Y + RF+ PIF + +F + + LI++ + SL A+ Q D
Sbjct: 240 PTPVSAYLHSATMVKAGIYLVARFT-PIFAGSQVWFW-TVTLVGLITLFWGSLNAVKQTD 297
Query: 454 IKKLIAYSSIAHMGFVT--LGI-----------FMLTKISIQGAIIQMISHALISSAMFI 500
+K ++A+S+++ +G + LGI + +I AI +I+HA ++F+
Sbjct: 298 LKGILAFSTVSQLGLIMSLLGIGAASLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFM 357
Query: 501 SIGFLYNQMKTRLISNFGGIINVIP-HFSVFFI-IFSLANCSLPGTSGFIGE---FMIIL 555
+G + ++ TR I GG++ ++P F++ I S+A LP +GF+ + F +L
Sbjct: 358 IVGIVDHETGTRDIRKLGGLMTIMPITFTIALIGALSMA--GLPPFNGFLSKEMFFESML 415
Query: 556 SAVKFNF 562
+A + N
Sbjct: 416 NATEANL 422
Score = 46.1 bits (110), Expect = 1e-04
Identities = 46/188 (24%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG 658
+NL+ +YL EL S++ +LI+ S A K ++ + ML G +LY +TG
Sbjct: 130 DNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTG 189
Query: 659 TLELQSIFNVIKLNNINCSVLAL-SLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL 717
+ ++ + + I S L + +++LI++G K PF++W+PD + + + L
Sbjct: 190 SFSIREMIA--NADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYL 247
Query: 718 LSTT-PKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAY 776
S T K ++++ I + W + ++ + +L G+++A+ Q + K ++A+
Sbjct: 248 HSATMVKAGIYLVARFTPIFAGSQV---WFWTVTLVGLITLFWGSLNAVKQTDLKGILAF 304
Query: 777 SSIAHMGL 784
S+++ +GL
Sbjct: 305 STVSQLGL 312
>gnl|CDD|178168 PLN02553, PLN02553, inositol-phosphate phosphatase.
Length = 270
Score = 162 bits (412), Expect = 1e-44
Identities = 85/256 (33%), Positives = 144/256 (56%), Gaps = 24/256 (9%)
Query: 921 YIVEAIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYA 980
++ A+ AA+ + II +G + +++ E K + V +KA E +I L +PS+
Sbjct: 10 FLEVAVDAAKAAGQIIRKGFYQTKHV--EHKGQVDLVTETDKACEDLIFNHLKQAFPSHK 67
Query: 981 FLIKKS---NYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPI 1037
F+ +++ + T +E WI+DPLD TNF H FP C+SI L K V+Y+PI
Sbjct: 68 FIGEETTAASGGTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPI 127
Query: 1038 RNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFK----------NNINSEEYAK 1087
++LFTA+KG GA+LN K I+ + ++++ AL+ T+ K N IN+
Sbjct: 128 LDELFTAVKGKGAFLNGKPIKASSQSELGKALLATEVGTKRDKATVDATTNRINA----- 182
Query: 1088 IFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGL-KPWNIAAGSLLIIESGGIISNF 1146
++ K ++LR G+ +LNL VA G+LD F+E G PW++AAG++++ E+GG++ +
Sbjct: 183 ---LLYKVRSLRMSGSCALNLCGVACGRLDIFYEIGFGGPWDVAAGAVIVKEAGGLVFDP 239
Query: 1147 KGEKNYLYTGDIVAGN 1162
G + + + A N
Sbjct: 240 SGGPFDIMSRRVAASN 255
>gnl|CDD|237156 PRK12647, PRK12647, putative monovalent cation/H+ antiporter
subunit A; Reviewed.
Length = 761
Score = 173 bits (441), Expect = 1e-44
Identities = 101/302 (33%), Positives = 146/302 (48%), Gaps = 64/302 (21%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGAMA----------- 49
+S+NL LF+ WE+ + S+LLIGF +++ A A L+A L+ G +A
Sbjct: 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNV 172
Query: 50 -----------------------------------KSAQFPLHTWLPDSMEGPTPASALI 74
KSAQFP H WLP++ME PTP SA +
Sbjct: 173 TGTYSLSELLASGDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYL 232
Query: 75 HAATMVTAGIFMITRMSPLFELSNTAL--SIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
H+ATMV AGI+++ R++P L T L +I+ G +T LL + Q D+K I+AYS
Sbjct: 233 HSATMVKAGIYLLARLNP--VLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
Query: 133 TLSQLGYMT--VGLGVS-AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGL 189
T+S LG + +GLG A ++ L+ H+ +K LF+ AG II + +DI +GGL
Sbjct: 291 TVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAG-IIDHETGTRDITKLGGL 349
Query: 190 YKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYY-FLGIDGLSLWFIPLT 248
+ MPIT +L+ LS+ G P GF +K+ IY L SL
Sbjct: 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKEL---------IYEALLEAPLWSLILTVAA 400
Query: 249 AF 250
Sbjct: 401 VL 402
Score = 91.5 bits (228), Expect = 1e-18
Identities = 94/366 (25%), Positives = 185/366 (50%), Gaps = 24/366 (6%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLA--EYMSAFLILSGLIIG 282
W+ + +DGLSL F L IT I LI L L + F L +
Sbjct: 50 WVPSLGVNLSFLLDGLSLTFALL---ITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMA 106
Query: 283 AFCAL---DGML-FYIFFEATLIPIFIIIG---TWGGSNRSYAAIKFFLYTLMGSLLMLI 335
+ L D ++ ++F+E T I F++IG + R AA++ L T G L +L
Sbjct: 107 SMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARR--AALQALLVTGGGGLALLA 164
Query: 336 SMIYLYYISNKSFNILS-WHQLSITKIEQIWLFITFFI---AFAIKIPIWPMHTWLPDAH 391
+I L ++ ++++ + + ++L I + AF K +P H WLP+A
Sbjct: 165 GLILLGNVTG-TYSLSELLASGDVIREHPLYLAILLLVLGGAFT-KSAQFPFHFWLPNA- 221
Query: 392 VEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMV 450
+EAPT S L +A M+K G Y L R + P+ + + L + ++++ +L+A+
Sbjct: 222 MEAPTPVSAYLHSATMVKAGIYLLARLN-PVLGGTPLWQTILPLF-GGLTMLTGALLAVR 279
Query: 451 QIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMK 510
Q D+K ++AYS+++ +G + + + + ++++I+ A++ +++H+L A+F+ G + ++
Sbjct: 280 QTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETG 339
Query: 511 TRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTST 570
TR I+ GG+ +P + ++ +L+ LP GF+ + +I + ++ +LT
Sbjct: 340 TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVA 399
Query: 571 ALIFSA 576
A++ +A
Sbjct: 400 AVLGNA 405
Score = 63.0 bits (154), Expect = 6e-10
Identities = 79/316 (25%), Positives = 143/316 (45%), Gaps = 47/316 (14%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSG----FMLYGISILY 654
+NL+++++ EL S+T +LI EAA + + +L +G +L G+ +L
Sbjct: 115 DNLITLFVFWELTSITSFLLIGFNHER----EAARRAALQALLVTGGGGLALLAGLILLG 170
Query: 655 GITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSF-KLGISPFHMWVPDVYQGASII 713
+TGT L + + I L L++LL+++G +F K PFH W+P+ + + +
Sbjct: 171 NVTGTYSLSELLA--SGDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPV 228
Query: 714 ITLLLSTT-PKLSLFVIIYRLLIKCLLPLV---INWQKILLILAIFSLIIGNVSAITQYN 769
L S T K IY L+ L P++ WQ IL + +++ G + A+ Q +
Sbjct: 229 SAYLHSATMVKAG----IY--LLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTD 282
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGA------- 822
K ++AYS+++ +G ++ ++ + + I L A
Sbjct: 283 LKLILAYSTVSALGTLVM-LLGLGSEL---------------AIKAAVLFLVAHSLYKGA 326
Query: 823 -FGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
F V ++ + T T ++ GL + P A ++ S+AG PP GF AK I+E
Sbjct: 327 LFMVAGIIDHET--GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
Query: 882 KIFETQKIWLLLLIIM 897
+ E L+L +
Sbjct: 385 ALLEAPLWSLILTVAA 400
>gnl|CDD|183649 PRK12649, PRK12649, putative monovalent cation/H+ antiporter
subunit A; Reviewed.
Length = 789
Score = 172 bits (437), Expect = 4e-44
Identities = 103/278 (37%), Positives = 141/278 (50%), Gaps = 63/278 (22%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR----------------- 44
S N QLF+ WE+ + S++LIG+W +P ++ K+ LI
Sbjct: 130 SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVIT 189
Query: 45 --------------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASA 72
IGA AKSAQ P + WLP++ME PTP SA
Sbjct: 190 GTYDIATILQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSA 249
Query: 73 LIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYS 132
+H+ATMV AG++++ R+ P+F + ++ G IT G L Q DIK I+AYS
Sbjct: 250 FLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
Query: 133 TLSQLGYMTV----------GLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQD 182
T+SQL Y+ GLGV+A T FHL+ HA FKA LFL AG I+ + +D
Sbjct: 310 TISQLAYLMTMYGYTTYHEPGLGVAAAT---FHLLNHATFKACLFLVAG-IVAHEAATRD 365
Query: 183 IRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
IR +GGL K MPIT I + I L++ G P +GF SK+
Sbjct: 366 IRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKE 403
Score = 99.1 bits (247), Expect = 5e-21
Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 27/385 (7%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS---LDIKKKLAEYMSAFLILSGLII 281
W+ + + + DGL++ + + I +II+ S + K+ L Y L+ G +I
Sbjct: 66 WLPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMI 125
Query: 282 GAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIYL 340
G + + + +IF+E T I F++IG W S Y A K L T G L M + L
Sbjct: 126 GMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLL 185
Query: 341 YYISNKSFNILSWHQLS--ITKIEQIWLF----ITFFIAFAIKIPIWPMHTWLPDAHVEA 394
+ I+ +++I + Q S I I+ LF I FI A K P + WLP+A +EA
Sbjct: 186 HVITG-TYDIATILQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNA-MEA 243
Query: 395 PTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
PT S L +A M+K G Y + R PIF +F L+ +I+++ +A Q D
Sbjct: 244 PTPVSAFLHSATMVKAGVYLVARIH-PIFSGTEAWFI-LVSGTGMITMVLAGFLAFRQTD 301
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTK----ISIQGAIIQMISHALISSAMFISIGFLYNQM 509
IK ++AYS+I+ + ++ T + + A +++HA + +F+ G + ++
Sbjct: 302 IKAILAYSTISQLAYLMTMYGYTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVAHEA 361
Query: 510 KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVK--------FN 561
TR I GG+ +P + I +LA +P +GF+ + M ++V+ F
Sbjct: 362 ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIGGPFT 421
Query: 562 FCIGVLTSTALIFSAAYSLCLSKNI 586
I + +F+ AYS+ L I
Sbjct: 422 IIIPAVAVLGGVFTFAYSIKLIDGI 446
Score = 60.6 bits (147), Expect = 4e-09
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 11/303 (3%)
Query: 586 IIFVLGQMI-MISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSG 644
++ +G MI M+ N + +++ EL S+T +LI ++ S A K ++
Sbjct: 117 LLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGL 176
Query: 645 FMLYGISILYGITGTLELQSIFNVIK-LNNINCSVLAL-SLLLIIVGLSFKLGISPFHMW 702
FM G +L+ ITGT ++ +I + + NI L L +L+LI +G + K PF++W
Sbjct: 177 FMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIW 236
Query: 703 VPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNV 762
+P+ + + + L S T + ++ R I + W ++ + ++++
Sbjct: 237 LPNAMEAPTPVSAFLHSATMVKAGVYLVAR--IHPIFSGTEAWFILVSGTGMITMVLAGF 294
Query: 763 SAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGA 822
A Q + K ++AYS+I+ + ++ ++ T H + + L T+ +
Sbjct: 295 LAFRQTDIKAILAYSTISQLAYLM-TMYGYTTYHEPGLGVAAATFHLLNHATFKACLFLV 353
Query: 823 FGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEK 882
G++ T ++ GL + P ++ I ++AG PP GF +K +E
Sbjct: 354 AGIVAHEA-----ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYET 408
Query: 883 IFE 885
E
Sbjct: 409 SVE 411
>gnl|CDD|236251 PRK08375, PRK08375, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 487
Score = 164 bits (418), Expect = 4e-43
Identities = 86/329 (26%), Positives = 175/329 (53%), Gaps = 7/329 (2%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDIK-KKLAEYMSAFLILSGLIIGAFCALDGMLFY 293
L D LS F+ +T+ + + +L ++ + + + FL+L ++GA D +
Sbjct: 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLF 132
Query: 294 IFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-SFNILS 352
+F E + + ++ G AA K+ + L+GS +LI + LY ++ + L+
Sbjct: 133 VFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA 192
Query: 353 WHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCY 412
+ + F+ +A A+K ++P+HTWLP A+ AP + +L+ ++ K+ Y
Sbjct: 193 GALAENPTVVTAFGFV--LLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVY 250
Query: 413 GLLRFSLPIFP---DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV 469
L+R +F + L+ L+L+S++ SL A+ Q D+K+++AYS+++ MG++
Sbjct: 251 ALIRIYFTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYI 310
Query: 470 TLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSV 529
LG+ +LT +++ ++ ++ HAL+ A+F++ G + TR +S G+ +P +
Sbjct: 311 LLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAA 370
Query: 530 FFIIFSLANCSLPGTSGFIGEFMIILSAV 558
F + SL+ +P TSGF+ ++ +++ AV
Sbjct: 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAV 399
Score = 153 bits (388), Expect = 2e-39
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 9/189 (4%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMS-----PL 93
AF + K+A FPLHTWLP + P + + + ++ + R+
Sbjct: 204 AFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGD 263
Query: 94 FELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYT 150
F + ++ + ++ L + Q+D+KR++AYST+SQ+GY+ +GL + A
Sbjct: 264 FRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALA 323
Query: 151 VSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGA 210
+ HL+ HA K LFL+AG+I + + + + GL + MP+T + LSL+G
Sbjct: 324 AGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
Query: 211 PFFSGFYSK 219
P SGF SK
Sbjct: 383 PPTSGFVSK 391
Score = 139 bits (352), Expect = 1e-34
Identities = 98/397 (24%), Positives = 186/397 (46%), Gaps = 45/397 (11%)
Query: 529 VFFIIFSLANCSLPGTS------GFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
F + SL L G G+ I L A + ++TS I + Y++
Sbjct: 41 TFALAISLLPQVLDGGVIAYVVGGWPPGIGIELRADSLSALFLLVTSILAIAALLYAIGY 100
Query: 583 S--KNIIFVLGQMIMISG-------NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAI 633
+ F +++++G +L ++++ LE+MSL+ L+A + + AA
Sbjct: 101 GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-ALAAAR 159
Query: 634 KYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFK 693
KY I+G++ S F+L G+ +LYG+TGTL + + + N + + +++ L+ K
Sbjct: 160 KYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENP----TVVTAFGFVLLALALK 215
Query: 694 LGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVI--IYRLLIKCLLPLVINWQKILL 750
+ P H W+P Y A ++T LLS K++++ + IY + + +L
Sbjct: 216 AAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLA 275
Query: 751 ILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLF 810
+LA+ S+++G+++A+ Q + KR++AYS+++ MG +L + + L +GL
Sbjct: 276 VLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLAL--LTPLALA------AGLL 327
Query: 811 YIITY------IFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSL 864
+++ + +F GA V T L GL +R P A + SL
Sbjct: 328 HLLHHALMKGALFLAAGAIEVTY--------GTRRLSELSGLGRRMPLTAAAFAVASLSL 379
Query: 865 AGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLI 901
G PPT GF +K+++ E + +L +++ SL+
Sbjct: 380 IGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLL 416
>gnl|CDD|236008 PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F;
Validated.
Length = 613
Score = 166 bits (423), Expect = 5e-43
Identities = 90/265 (33%), Positives = 140/265 (52%), Gaps = 49/265 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRI--------------- 45
+S++LF ++ EI+ +++YLL+GFWY +PL +TA AFL R+
Sbjct: 138 LSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPL 197
Query: 46 --------------------------------GAMAKSAQFPLHTWLPDSMEGPTPASAL 73
G K AQFPLH WL ++MEGP PAS L
Sbjct: 198 AGTLNFSDLAAWAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYST 133
++ +V G +++ ++ P+ LS AL++++ IG +TA L+ I Q DIKR ++YST
Sbjct: 258 RNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYST 316
Query: 134 LSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYM 193
+ LG + + +G+ +++ L+THA KALLF+S GSII+ QD+ +GGL+ M
Sbjct: 317 SAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRM 375
Query: 194 PITCITSLIGLLSLVGAPFFSGFYS 218
P T + L+G LV GF++
Sbjct: 376 PATTLAFLVGSAGLVALLPLGGFWA 400
Score = 53.0 bits (128), Expect = 7e-07
Identities = 42/166 (25%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
Query: 382 PMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISI 441
P+H WL +A +E P S++ ++++ G + L++ P+ S ++I + ++
Sbjct: 239 PLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQ-PVL-ALSPVALTVLIVIGTVTA 295
Query: 442 IYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFIS 501
I SL+A+ QIDIK+ ++YS+ A++G V + + + A++ +++HA+ + +F+S
Sbjct: 296 IGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQ---QPDIALLLLLTHAIAKALLFMS 352
Query: 502 IGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF 547
+G + T+ ++ GG+ + +P ++ F++ S +L GF
Sbjct: 353 VGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGF 398
Score = 41.4 bits (98), Expect = 0.003
Identities = 57/259 (22%), Positives = 112/259 (43%), Gaps = 28/259 (10%)
Query: 645 FMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+L G+ L + GTL + N++ L L +I G + K P H+W+
Sbjct: 186 LLLMGVVALSPLAGTLNFSDLAAWAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLD 245
Query: 705 DVYQG---ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGN 761
+ +G ASI+ ++ T +V+I + L P+ + +L+++ + I +
Sbjct: 246 EAMEGPNPASILRNSVVVAT---GAWVLIKLQPVLALSPVALT---VLIVIGTVTAIGAS 299
Query: 762 VSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA--- 818
+ AI Q + KR ++YS+ A++GL+ I++ ++ L ++T+ A
Sbjct: 300 LVAIAQIDIKRALSYSTSAYLGLVF---IAVGLQQPDI--------ALLLLLTHAIAKAL 348
Query: 819 ILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFF 878
+ + G IIL EL GL R P L ++ L P GF+A
Sbjct: 349 LFMSVGSIIL--TTITQDLTELG---GLWSRMPATTLAFLVGSAGLVALLPLGGFWALLR 403
Query: 879 IFEKIFETQKIWLLLLIIM 897
+ + ++ + +L+++
Sbjct: 404 LADGLWAVSPWLVGVLLLV 422
>gnl|CDD|233200 TIGR00940, 2a6301s01, Tmonovalent cation:proton antiporter. This
family of proteins constists of bacterial multicomponent
K+:H+ and Na+:H+ antiporters. The best characterized
systems are the PhaABCDEFG system of Rhizobium meliloti
which functions in pH adaptation and as a K+ efflux
system and the MnhABCDEFG system of Staphylococcus
aureus which functions as a Na+:H+ antiporter [Transport
and binding proteins, Cations and iron carrying
compounds].
Length = 793
Score = 166 bits (422), Expect = 4e-42
Identities = 94/282 (33%), Positives = 140/282 (49%), Gaps = 63/282 (22%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLIN----------------- 43
+S+NL L++ WE+ + S+LLI +W+ + + K+ I
Sbjct: 124 LSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKI 183
Query: 44 -----------------------------RIGAMAKSAQFPLHTWLPDSMEGPTPASALI 74
+GA KSAQFP H WLPD+ME PTP SA +
Sbjct: 184 TGSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYL 243
Query: 75 HAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
H+ATMV AG++++ R +P+F + I+ G IT + I Q D+K I+A+ST+
Sbjct: 244 HSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTI 303
Query: 135 SQLGYMTVGLGV----------------SAYTVSIFHLMTHAFFKALLFLSAGSIIINMK 178
SQLG + V LG+ A ++FHL+ HA FK LF++AG II +
Sbjct: 304 SQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGSLFMAAG-IIDHET 362
Query: 179 HNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
+DIR +GGL+ MPIT ++I ++ G P F+GF SK+
Sbjct: 363 GTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKE 404
Score = 110 bits (277), Expect = 1e-24
Identities = 110/397 (27%), Positives = 188/397 (47%), Gaps = 38/397 (9%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILIS---LDIKKKLAEYMSAFLILSGLII 281
W+ + + L +DGL+L F L I ++++L S L ++ L + + L G ++
Sbjct: 61 WVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAML 120
Query: 282 GAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIYL 340
G + + +L Y+F+E T I F++I W S Y A K T+ G L ML +I L
Sbjct: 121 GVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILL 180
Query: 341 YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI----KIPIWPMHTWLPDAHVEAPT 396
I+ SF+I + S I LF T + + K +P H WLPDA +EAPT
Sbjct: 181 GKITG-SFSIDAVIA-SADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDA-MEAPT 237
Query: 397 EGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIK 455
S L +A M+K G Y L RF+ P+F +F ++ LI++++ S A+ Q D+K
Sbjct: 238 PVSAYLHSATMVKAGLYLLARFT-PVFAGTEAWFW-IVGLAGLITLLWGSYFAIFQQDLK 295
Query: 456 KLIAYSSIAHMGFVT--LGI------FMLTKISIQG-----AIIQMISHALISSAMFISI 502
++A+S+I+ +G + LG+ + I A+ +I+HA ++F++
Sbjct: 296 GILAFSTISQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGSLFMAA 355
Query: 503 GFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI--------- 553
G + ++ TR I GG+ +++P +I S A +P +GF+ + M
Sbjct: 356 GIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHL 415
Query: 554 --ILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
V + + + A +F+ YSL + F
Sbjct: 416 VNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFF 452
Score = 75.3 bits (185), Expect = 1e-13
Identities = 72/314 (22%), Positives = 143/314 (45%), Gaps = 21/314 (6%)
Query: 590 LGQMI-MISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
+G M+ ++ +NL+ +Y+ EL S+ +LI+ + S A K + + ML
Sbjct: 116 MGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLG 175
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLAL-SLLLIIVGLSFKLGISPFHMWVPDVY 707
G+ +L ITG+ + ++ + + I S L +++L+++G K PFH+W+PD
Sbjct: 176 GLILLGKITGSFSIDAV--IASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAM 233
Query: 708 QGASIIITLLLSTT-PKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAIT 766
+ + + L S T K L+++ + W I+ + + +L+ G+ AI
Sbjct: 234 EAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTE---AWFWIVGLAGLITLLWGSYFAIF 290
Query: 767 QYNFKRMIAYSSIAHMGLM--LFSIISIKTSHNNLII---FNSCDSGLFYII---TYIFA 818
Q + K ++A+S+I+ +GL+ L + S + + + +F++I T+ +
Sbjct: 291 QQDLKGILAFSTISQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGS 350
Query: 819 ILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFF 878
+ A G+I + T ++ GL P + MI ++AG PP GF +K
Sbjct: 351 LFMAAGII-----DHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEM 405
Query: 879 IFEKIFETQKIWLL 892
F + +
Sbjct: 406 FFAEAITAHLVNPF 419
>gnl|CDD|180606 PRK06525, PRK06525, hydrogenase 4 subunit D; Validated.
Length = 479
Score = 160 bits (408), Expect = 5e-42
Identities = 87/270 (32%), Positives = 136/270 (50%), Gaps = 56/270 (20%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGAM------------ 48
S+ L L L +EI G+ S+ LI + Y P A+ + LKA LI IG++
Sbjct: 131 YSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQ 189
Query: 49 -----------------------------AKSAQFPLHTWLPDSMEGPTPASALIHAATM 79
KSAQ P ++WLPD+ME PTPASA +HAA+M
Sbjct: 190 TGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASM 249
Query: 80 VTAGIFMITR----MSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLS 135
V G+++ R M P+ + +++ + + F M L Q D+KR++AYST++
Sbjct: 250 VKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLP---QQDMKRLLAYSTIT 306
Query: 136 QLGYMTVGLGVS------AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGL 189
QLGYM GL ++ A SI ++ HAF K+L FL AG++ + + + + G+
Sbjct: 307 QLGYMFFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGV 365
Query: 190 YKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
K +P+ + + L++ G P F+GF+SK
Sbjct: 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSK 395
Score = 110 bits (276), Expect = 4e-25
Identities = 101/397 (25%), Positives = 180/397 (45%), Gaps = 52/397 (13%)
Query: 191 KYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIY----YFLGIDGLSLWFIP 246
+ + + + +LSL A FY K + + N+ + L ID +S+
Sbjct: 28 ELGVLFAALTTLCMLSLAYA-----FYQAGKVAVTLTLVNLGDVALFGLVIDPVSVLIGF 82
Query: 247 LTAFITLIIILISLDIKKKLAEYMSA-------------FLILSGLIIGAFCALD----- 288
+ + L++ L S YMS + L IGA L
Sbjct: 83 VVVLLGLLVTLYSTG-------YMSPGNREHPVHEGTGRYYAFLLLFIGAMAGLVYSSTL 135
Query: 289 -GMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKS 347
G+L +FFE T + + +I + +A+K L T +GSL + ++ L+ + +
Sbjct: 136 LGLL--LFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLF-LQTGT 192
Query: 348 FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL-AAIM 406
F + + L + + +F+ A K P ++WLPDA +EAPT S L AA M
Sbjct: 193 FALSALSGLHGS--LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLHAASM 249
Query: 407 LKLGCYGLLRFSL---PIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSI 463
+K+G Y R PI Y + +++++++Y L+ + Q D+K+L+AYS+I
Sbjct: 250 VKVGVYIFARAIQSMGPIPHVIGY----VGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
Query: 464 AHMG--FVTLGIFML-TKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGI 520
+G F L + +L ++++++G+I + +HA S F+ G L TRL+ G+
Sbjct: 306 TQLGYMFFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGV 365
Query: 521 INVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
+ +P V F + +LA +P +GF +F I +
Sbjct: 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAG 402
Score = 71.2 bits (175), Expect = 1e-12
Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 37/322 (11%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
+F+ ++ + LL + L E+ L LI S + + +A+K ++ + S +
Sbjct: 121 LFIGAMAGLVYSSTLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGL 179
Query: 647 LYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDV 706
+ L+ TGT L ++ + ++ S+ L L I+ K PF+ W+PD
Sbjct: 180 YLAAATLFLQTGTFALSAL------SGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA 233
Query: 707 Y----------QGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFS 756
AS++ K+ +++ + +P VI + + ++AI +
Sbjct: 234 MEAPTPASAYLHAASMV---------KVGVYIFARAIQSMGPIPHVIGY--VGAVMAIVT 282
Query: 757 LIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI-ISIKTSHNNLIIFNSCDSGLFYIITY 815
L+ G + + Q + KR++AYS+I +G M F + ++I S L + YI +
Sbjct: 283 LLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLALEG------SIAYIFNH 336
Query: 816 IFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYA 875
FA F V L + T L G+ ++ P + + ++ G PP GF++
Sbjct: 337 AFAKSLFFLVAGALSYSC--GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFS 394
Query: 876 KFFIFEKIFETQKIWLLLLIIM 897
KF IF FE + +LL M
Sbjct: 395 KFPIFAAGFELSVEYWILLPAM 416
>gnl|CDD|131015 TIGR01960, ndhF3_CO2, NAD(P)H dehydrogenase, subunit NdhF3 family.
This family represents a subfamily of NAD(P)H
dehydrogenase subunit 5, or ndhF. It is restricted to
two paralogs in each completed cyanobacterial genome, in
which several subtypes of ndhF are found. Included in
this family is NdhF3, shown to play a role in
high-affinity CO2 uptake in Synechococcus sp. PCC7002.
In all cases, neighboring genes include a paralog of
ndhD but do include other NAD(P)H dehydrogenase
subunits. Instead, genes related to C02 uptake tend to
be found nearby.
Length = 606
Score = 160 bits (407), Expect = 4e-41
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 52/275 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
+S++LF ++ EI+ +++YLLIGFW+ +PL +T AFL R+G
Sbjct: 138 LSDSLFFSYVLLEILTLSTYLLIGFWFAQPLVVTGARDAFLTKRVGDLILLMGVVALSPL 197
Query: 47 ---------------------------------AMAKSAQFPLHTWLPDSMEGPTPASAL 73
K AQFPLH WL ++MEGP PAS L
Sbjct: 198 AGSWNYDDLAQWAATANVNPTTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYST 133
+ +V G +++ ++ P+ LS AL+ ++ IG++TA L+ I Q DIKR ++YS
Sbjct: 258 -RNSVVVATGAWVLIKLQPVLTLSPVALTALIAIGSVTAIGGSLIAIAQIDIKRALSYSV 316
Query: 134 LSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYM 193
+ +G + + +G+ +++ L+THA KALLF+S GSII N QD+ +GGL+
Sbjct: 317 SAYMGLVFIAVGLGQGDLALLLLLTHAIAKALLFMSIGSIIWN-TVTQDLTELGGLWSRR 375
Query: 194 PITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDY 228
PI+ ++ ++G L+ P F++ K D
Sbjct: 376 PISGLSFVVGSAGLIAVPPLGSFWAWLK---LADG 407
Score = 61.7 bits (150), Expect = 2e-09
Identities = 70/287 (24%), Positives = 135/287 (47%), Gaps = 16/287 (5%)
Query: 270 MSAFLILSGLIIGAFCAL---DGMLF-YIFFEATLIPIFIIIGTW-GGSNRSYAAIKFFL 324
++ F L GL L D + F Y+ E + +++IG W A FL
Sbjct: 119 LARFFALLGLFEAGLGGLVLSDSLFFSYVLLEILTLSTYLLIGFWFAQPLVVTGARDAFL 178
Query: 325 YTLMGSLLMLISMIYLYYISNKSFN---ILSWHQLSITKIEQIWLFITFFIAFAI-KIPI 380
+G L++L+ ++ L ++ S+N + W + L IA K
Sbjct: 179 TKRVGDLILLMGVVALSPLAG-SWNYDDLAQWAATANVNPTTATLLGLALIAGPTGKCAQ 237
Query: 381 WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
+P+H WL +A +E P S++ ++++ G + L++ P+ S +I + ++
Sbjct: 238 FPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQ-PVLT-LSPVALTALIAIGSVT 294
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFI 500
I SLIA+ QIDIK+ ++YS A+MG V + + + A++ +++HA+ + +F+
Sbjct: 295 AIGGSLIAIAQIDIKRALSYSVSAYMGLVFIAVGLG---QGDLALLLLLTHAIAKALLFM 351
Query: 501 SIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGF 547
SIG + T+ ++ GG+ + P + F++ S ++P F
Sbjct: 352 SIGSIIWNTVTQDLTELGGLWSRRPISGLSFVVGSAGLIAVPPLGSF 398
Score = 54.0 bits (130), Expect = 4e-07
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 29/311 (9%)
Query: 599 NNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG 658
++L Y+ LE+++L+ +LI A F+ + +L G+ L + G
Sbjct: 140 DSLFFSYVLLEILTLSTYLLIGFWFAQPLVVTGARDAFLTKRVGDLILLMGVVALSPLAG 199
Query: 659 TLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG---ASIIIT 715
+ + N+N + L L +I G + K P H+W+ + +G ASI+
Sbjct: 200 SWNYDDLAQWAATANVNPTTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRN 259
Query: 716 LLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIA 775
++ T +V+I + L P+ + L+ + + I G++ AI Q + KR ++
Sbjct: 260 SVVVAT---GAWVLIKLQPVLTLSPVALT---ALIAIGSVTAIGGSLIAIAQIDIKRALS 313
Query: 776 YSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA---ILGAFGVIILLKNN 832
YS A+MGL+ I++ D L ++T+ A + + G II
Sbjct: 314 YSVSAYMGLVF---IAVGL--------GQGDLALLLLLTHAIAKALLFMSIGSIIWNTV- 361
Query: 833 TCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLL 892
T +L GL R P L ++ L PP F+A + + ++ T WL+
Sbjct: 362 ----TQDLTELGGLWSRRPISGLSFVVGSAGLIAVPPLGSFWAWLKLADGLWATSP-WLV 416
Query: 893 LLIIMCSLIGA 903
++++ +L+ A
Sbjct: 417 GVLLVVNLLTA 427
>gnl|CDD|237154 PRK12644, PRK12644, putative monovalent cation/H+ antiporter
subunit A; Reviewed.
Length = 965
Score = 163 bits (415), Expect = 6e-41
Identities = 85/264 (32%), Positives = 131/264 (49%), Gaps = 47/264 (17%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINR----------------- 44
S+NL L++ WE+ + S+LLIG + ++ + A L+A L+
Sbjct: 125 SDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAA 184
Query: 45 --------------------------IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAAT 78
+GA++KSA P H WLP +M PTP SA +HAA
Sbjct: 185 GTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAA 244
Query: 79 MVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLG 138
MV AGI+++ R++P F +L +G T G + Q+D+K I+AY T+SQLG
Sbjct: 245 MVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLG 304
Query: 139 YMT--VGLGVSAYTVS-IFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPI 195
++T VG+G ++ + L+ HA FKA LFL G II + +DIR + GL + P+
Sbjct: 305 FLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVG-IIDHSTGTRDIRKLSGLGRRQPV 363
Query: 196 TCITSLIGLLSLVGAPFFSGFYSK 219
+ + + S+ G P GF +K
Sbjct: 364 LAVVAALAAASMAGLPPLLGFVAK 387
Score = 82.3 bits (204), Expect = 9e-16
Identities = 90/339 (26%), Positives = 167/339 (49%), Gaps = 40/339 (11%)
Query: 235 LGIDGLSLWFIPLTAFITLIII----LISL-------DIKKKLAEYMSAFLILSGLIIGA 283
LG+D L+ L A ++L+++ L+ L D + +L + + + +G + G
Sbjct: 64 LGLD-LAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLGRFAAELVAFAGAMFGL 122
Query: 284 FCALDGMLFYIFFEATLIPIFIIIGTWGG--SNRSYAAIKFFLYTLMGSLLMLISMIYL- 340
+ + +L Y+F+E T + F++IG + ++R AA++ L T G L ML+ +I L
Sbjct: 123 VTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRR-AALQALLVTTAGGLAMLVGIIILG 181
Query: 341 -----YYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI-KIPIWPMHTWLPDAHVEA 394
Y +S + + +S+ + + A+ K I P H WLP A + A
Sbjct: 182 QAAGTYRLSELLADPPTGPAVSVA--------VVLILVGALSKSAIVPFHFWLPGA-MAA 232
Query: 395 PTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQID 453
PT S L AA M+K G Y + R + P F D + ++ L L +++ A+ Q D
Sbjct: 233 PTPVSAYLHAAAMVKAGIYLVARLA-PGFADVPVWRP-TVLVLGLATMLLGGWRALRQHD 290
Query: 454 IKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
+K ++AY +++ +GF+T+ + + T+ + + +++HAL +A+F+ +G + + TR
Sbjct: 291 LKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRD 350
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCS---LPGTSGFIG 549
I G+ P V ++ +LA S LP GF+
Sbjct: 351 IRKLSGLGRRQP---VLAVVAALAAASMAGLPPLLGFVA 386
Score = 47.2 bits (113), Expect = 5e-05
Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 59/280 (21%)
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
ML GI IL GT L + + ++++++LI+VG K I PFH W+P
Sbjct: 173 MLVGIIILGQAAGTYRLSELLA----DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLP- 227
Query: 706 VYQGASIIITLLLSTTPKLSLFVI--------IYRLLIKCLLPL---VINWQKILLILAI 754
GA + + TP +S ++ IY L+ L P V W+ +L+L +
Sbjct: 228 ---GA------MAAPTP-VSAYLHAAAMVKAGIY--LVARLAPGFADVPVWRPTVLVLGL 275
Query: 755 FSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIIT 814
++++G A+ Q++ K ++AY +++ +G + ++ I T L +GL
Sbjct: 276 ATMLLGGWRALRQHDLKLILAYGTVSQLGFLT-VLVGIGTRDAAL-------AGL----- 322
Query: 815 YIFAILGA--------FGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAG 866
A+L A F V+ ++ ++T T ++ GL +R P A++ + S+AG
Sbjct: 323 ---AMLLAHALFKAALFLVVGIIDHST--GTRDIRKLSGLGRRQPVLAVVAALAAASMAG 377
Query: 867 FPPTIGFYAKFFIFEKI-----FETQKIWLLLLIIMCSLI 901
PP +GF AK E + +L I++ S++
Sbjct: 378 LPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGIVLGSIL 417
>gnl|CDD|177157 MTH00094, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 403
Score = 153 bits (389), Expect = 4e-40
Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 20/367 (5%)
Query: 250 FITLIIILISLDIKKKLAEYMSAFLILSGLIIGA----FCALDGMLFYIFFEATLIPIFI 305
F+ LI +++ + L+E LILS L+I F + + ++ Y+FFE ++ PI I
Sbjct: 41 FVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSNMLMLYMFFELSMFPILI 100
Query: 306 IIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNI-LSWHQLSITKIEQI 364
+I +G I Y L + +++Y + F++ LS
Sbjct: 101 MILGYG---SQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWE----- 152
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD 424
+F ++F +K P++ +H WLP AHVEAPT S++LA ++LKLG G LR +
Sbjct: 153 -MFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL--- 208
Query: 425 ASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA 484
++ ++N I SL+ +I S + Q D K L AYSS+ HM F+ L + ++
Sbjct: 209 -NFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSG 267
Query: 485 IIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGT 544
++ M++H S+ MF IG Y+ K+RLI + F + F + L+N +P +
Sbjct: 268 LMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPS 327
Query: 545 SGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSI 604
F EF+II ++ N + S YSL L + +G+ N + +
Sbjct: 328 LSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVS--SFMGKKFSNFNNFNVGL 385
Query: 605 YLGLELM 611
L L M
Sbjct: 386 SLPLVFM 392
Score = 34.9 bits (81), Expect = 0.26
Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISI----KTSHNNLIIFNSC 805
+I ++ +I+ + + Q + K + AYSS+ HM +L S++ + K S +++ +
Sbjct: 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGY 276
Query: 806 DSGL-FYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSL 864
S L FY+I + I +K+ + + + LI + S
Sbjct: 277 TSTLMFYLIGEFYHI---------------SKSRLIYFMNSFFSSSMFFGLIFSLVFLSN 321
Query: 865 AGFPPTIGFYAKFFIFEKIFETQKIWLLLLII 896
+G PP++ F+++F I F K +
Sbjct: 322 SGVPPSLSFFSEFLIISNSFMKNKFSFFFIFF 353
>gnl|CDD|183646 PRK12646, PRK12646, putative monovalent cation/H+ antiporter
subunit A; Reviewed.
Length = 800
Score = 157 bits (399), Expect = 3e-39
Identities = 96/283 (33%), Positives = 140/283 (49%), Gaps = 64/283 (22%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLIN----------------- 43
+S+N +++ WE+ ++S+LLI +WY+ + +++F+I
Sbjct: 128 LSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIM 187
Query: 44 -----------------------------RIGAMAKSAQFPLHTWLPDSMEGPTPASALI 74
+GA KSAQFP H WLP +M PTP SA +
Sbjct: 188 TGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYL 247
Query: 75 HAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
H+ATMV AGIF++ R +PL LSN + I+ F+G IT F + + Q D+K I+AYST+
Sbjct: 248 HSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
Query: 135 SQLGYMT--VGLG-----------VSAYTVS----IFHLMTHAFFKALLFLSAGSIIINM 177
SQLG + VG+G S Y +FHLM HA FK LF+ G II +
Sbjct: 308 SQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFAALFHLMNHAIFKCALFMGVG-IIDHE 366
Query: 178 KHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
+DIR + G+ + P + I LS+ G PF +GF SK+
Sbjct: 367 AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
Score = 104 bits (262), Expect = 9e-23
Identities = 104/405 (25%), Positives = 193/405 (47%), Gaps = 53/405 (13%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSA----------FL 274
W+ +I L +DGLSL F +LII LI + + +Y+S+ +L
Sbjct: 64 WMKTLDINLDLRLDGLSLMF-------SLIISLIGIAVFFYATQYLSSRKDNLPRFYFYL 116
Query: 275 ILSGL-IIGAFCALDGMLFYIFFEATLIPIFIIIGTW-GGSNRSYAAIKFFLYTLMGSLL 332
L +IG + + +L Y+F+E T + F++I W + + AI+ F+ T+ G L
Sbjct: 117 TLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLA 176
Query: 333 MLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAI----KIPIWPMHTWLP 388
+L+ I LY ++ N ++ I+ LFI F + K +P H WLP
Sbjct: 177 LLVGFIMLYIMTGT--NNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLP 234
Query: 389 DAHVEAPTEGSVIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLI 447
A + APT S L +A M+K G + L RF+ P+ ++ Y ++ + LI++++ S+
Sbjct: 235 RA-MAAPTPVSAYLHSATMVKAGIFLLFRFT-PLLGLSNMYIY-IVTFVGLITMLFGSIT 291
Query: 448 AMVQIDIKKLIAYSSIAHMGF----VTLG----------IFMLTKISIQGAIIQMISHAL 493
A+ Q D+K ++AYS+I+ +G V +G I + + A+ +++HA+
Sbjct: 292 ALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFAALFHLMNHAI 351
Query: 494 ISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
A+F+ +G + ++ TR I G+ + P ++ I +L+ +P +GF+ + M
Sbjct: 352 FKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMF 411
Query: 554 ILSAVK----------FNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
+ + + I + A IF+ Y+L + K + +
Sbjct: 412 LDALTQTGQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFW 456
Score = 72.1 bits (177), Expect = 1e-12
Identities = 76/321 (23%), Positives = 156/321 (48%), Gaps = 17/321 (5%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
+F+ + ++ +N + +Y+ EL S++ +LI+ NN S AI+ F++ +
Sbjct: 117 TLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLA 176
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLAL-SLLLIIVGLSFKLGISPFHMWVP 704
+L G +LY +TGT + I + ++I L + + + ++G K PFH+W+P
Sbjct: 177 LLVGFIMLYIMTGTNNITEILG--QADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLP 234
Query: 705 DVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSA 764
+ + L S T + +++R LL L + I+ + + +++ G+++A
Sbjct: 235 RAMAAPTPVSAYLHSATMVKAGIFLLFRF--TPLLGLSNMYIYIVTFVGLITMLFGSITA 292
Query: 765 ITQYNFKRMIAYSSIAHMGLMLFSIISI-----KTSHNNLIIFN--SCDSGLFYIITY-I 816
+ Q++ K ++AYS+I+ +G M+ +++ I + + + + LF+++ + I
Sbjct: 293 LKQWDLKGILAYSTISQLG-MIMAMVGIGGGYAQHQQDAIASIYVFVLFAALFHLMNHAI 351
Query: 817 FAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAK 876
F GV I+ + T ++ I G+ Q P L+M I S+AG P GF +K
Sbjct: 352 FKCALFMGVGII---DHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSK 408
Query: 877 FFIFEKIFETQKIWLLLLIIM 897
+ + +T ++ LI M
Sbjct: 409 EMFLDALTQTGQLSQFSLISM 429
>gnl|CDD|236332 PRK08668, PRK08668, NADH dehydrogenase subunit M; Validated.
Length = 610
Score = 155 bits (393), Expect = 3e-39
Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 20/358 (5%)
Query: 223 KIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGL-II 281
K+ + + + LS +F ++ + + + K K Y + F ++S ++
Sbjct: 53 KLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVL 112
Query: 282 GAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLY 341
G F A D + YIF+E F+++ +R A++K+F+ + +G+ ML ++ +Y
Sbjct: 113 GVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRK-ASLKYFVLSAIGAYAMLYAIFLIY 171
Query: 342 YISNK-SFNILSWHQLSITKIEQIWLFITFFIAFAI-KIPIWPMHTWLPDAHVEAPTEGS 399
+ F +S ++ T + F +AF + K I+P+H W PDA+ EAP S
Sbjct: 172 AKTGTFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFS 231
Query: 400 VILAAIMLKLGCYGLLRFSLPIFPDASYY-----------FSNLIITLSLISIIYISLIA 448
+L+ + KLG YG L L + P + F+ ++ L ISII +L+A
Sbjct: 232 AVLSGQLSKLGAYGFL-LVLYVLPGTKLFSEFGTYRGVPLFNYILAWLGNISIIVGTLMA 290
Query: 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ 508
++Q DIKKLIAYSS+A+ G++ +G+ + T + G + + +HAL F+ + +
Sbjct: 291 ILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYR 350
Query: 509 MKTRLISNFGGIINVIP--HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCI 564
T IS GG+I +P I SLA +P SGF +++I + + I
Sbjct: 351 TGTTKISEMGGLIEKMPFTFAMYLVAIISLA--GIPPMSGFASKWLIFEALISKGMPI 406
Score = 111 bits (280), Expect = 4e-25
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 66/281 (23%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGA------------- 47
++N+L L++ WEI+ +S++++ K + A+LK F+++ IGA
Sbjct: 116 LANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAK 173
Query: 48 ---------------------------------MAKSAQFPLHTWLPDSM-EGPTPASAL 73
+AK+ FPLH W PD+ E P SA+
Sbjct: 174 TGTFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAV 233
Query: 74 IHAATMVTAG---------IFMITRM-SPLFELSNTAL--SIILFIGAITAFFMGLLGII 121
+ + G + T++ S L I+ ++G I+ L+ I+
Sbjct: 234 LSGQ-LSKLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNYILAWLGNISIIVGTLMAIL 292
Query: 122 QNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHAFFKALLFLSAGSIIINMK 178
Q DIK++IAYS+++ GY+ VGLG+ + +FH+ HA FK L FL ++I
Sbjct: 293 QEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTG 352
Query: 179 HNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
I MGGL + MP T L+ ++SL G P SGF SK
Sbjct: 353 -TTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
Score = 106 bits (267), Expect = 2e-23
Identities = 91/344 (26%), Positives = 162/344 (47%), Gaps = 33/344 (9%)
Query: 551 FMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLEL 610
F +I V F+ ++ S A +++ ++ VLG + N+LL++Y+ E+
Sbjct: 74 FAMISLLVIFSVAFFMV-SEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEI 129
Query: 611 MSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIK 670
M+ + +++ K S +A++KYF+L + + MLY I ++Y TGT + I +
Sbjct: 130 MTFSSFMMVPMGKK--ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLI 187
Query: 671 LNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVY----QGASIIITLLLSTTPKLSL 726
+ L + L L+ G++ K GI P H+W PD Y Q S +++ LS
Sbjct: 188 NDTSTGFALIVFLFLLAFGVA-KAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGF 246
Query: 727 FVIIYRLLIKCLLPLVINWQKILLILAIF------SLIIGNVSAITQYNFKRMIAYSSIA 780
+++Y L L ++ + L I S+I+G + AI Q + K++IAYSS+A
Sbjct: 247 LLVLYVLPGTKLFSEFGTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVA 306
Query: 781 HMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFA---ILGAFGVIILLKNNTCNKT 837
+ G +L + + TS GLF++ + F +I T
Sbjct: 307 NGGYILVGL-GLGTSL-------GFAGGLFHVFNHALFKGLFFLIFAAVIYR-----TGT 353
Query: 838 DELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
++ GL ++ P+ + ++ + SLAG PP GF +K+ IFE
Sbjct: 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFE 397
>gnl|CDD|237158 PRK12650, PRK12650, putative monovalent cation/H+ antiporter
subunit A; Reviewed.
Length = 962
Score = 156 bits (396), Expect = 1e-38
Identities = 88/271 (32%), Positives = 136/271 (50%), Gaps = 56/271 (20%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIG------------------------------------ 24
+++++ LF+ WE+V +AS+ LI
Sbjct: 128 LADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTG 187
Query: 25 -----------FWYDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASAL 73
W +KP T A LI + A KSAQFP H WLP++M TP SA
Sbjct: 188 TTSLSGILHSDVWAEKPGLTTV--VAVLI-AVAAFTKSAQFPFHFWLPEAMAAITPVSAF 244
Query: 74 IHAATMVTAGIFMITRMSPLFELSNTALSIILFI-GAITAFFMGLLGIIQNDIKRIIAYS 132
+HAA +V AGI+++ R SP+F + +L I G ITA + + + D+K++ AYS
Sbjct: 245 LHAAAVVKAGIYLLLRFSPVFH-DVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYS 303
Query: 133 TLSQLGYM--TVGLGVS-AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGL 189
T+SQLG++ T+G+G A T ++ H + HA FK+ LF+ G ++ + +DIR +G L
Sbjct: 304 TVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIG-VVDHQAGTRDIRRLGSL 362
Query: 190 YKYMPITCITSLIGLLSLVGAPFFSGFYSKD 220
++ MP T ++ I LS+ P GF SK+
Sbjct: 363 WRRMPFTFVSVTIAALSMAAVPPLFGFVSKE 393
Score = 102 bits (255), Expect = 8e-22
Identities = 87/330 (26%), Positives = 158/330 (47%), Gaps = 36/330 (10%)
Query: 238 DGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCAL----DGMLFY 293
D LSL+F L I ++ + S + S +L+++ + A L D ++ +
Sbjct: 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMT-AFMAAMLLLVLADDVVVLF 136
Query: 294 IFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSW 353
+ +E + F +I G + +I+ + T G L +L ++ ++
Sbjct: 137 VAWELVSLASFFLIARSGSGGEA-GSIRTLILTFFGGLTLLAAVA------------IAA 183
Query: 354 HQLSITKIEQI-----W-------LFITFFIAFAI--KIPIWPMHTWLPDAHVEAPTEGS 399
Q T + I W + IA A K +P H WLP+A A T S
Sbjct: 184 TQTGTTSLSGILHSDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMA-AITPVS 242
Query: 400 VIL-AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLI 458
L AA ++K G Y LLRFS P+F D + + + L+I + +I+ + ++ A+ + D+KKL
Sbjct: 243 AFLHAAAVVKAGIYLLLRFS-PVFHDVAVW-NWLLIIVGMITALMGAVFAVQKTDLKKLT 300
Query: 459 AYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFG 518
AYS+++ +G++ I + T ++ A++ ++HAL S++F+ IG + +Q TR I G
Sbjct: 301 AYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLG 360
Query: 519 GIINVIPHFSVFFIIFSLANCSLPGTSGFI 548
+ +P V I +L+ ++P GF+
Sbjct: 361 SLWRRMPFTFVSVTIAALSMAAVPPLFGFV 390
Score = 54.7 bits (132), Expect = 3e-07
Identities = 81/366 (22%), Positives = 153/366 (41%), Gaps = 63/366 (17%)
Query: 566 VLTSTALIFSAAYSLCLSKNI-------IFVLGQMIMISGNNLLSIYLGLELMSLTLCVL 618
V+ + I+SA Y N F+ ++++ ++++ +++ EL+SL L
Sbjct: 90 VIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFL 149
Query: 619 IASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIF--NVIKLNNINC 676
IA + +I+ IL +L ++I TGT L I +V
Sbjct: 150 IARSGSG--GEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLT 207
Query: 677 SVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVI---IYRL 733
+V+A+ LI V K PFH W+P+ + + L + V+ IY L
Sbjct: 208 TVVAV---LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAA------VVKAGIYLL 258
Query: 734 L-IKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISI 792
L + V W +L+I+ + + ++G V A+ + + K++ AYS+++ +G + + I +
Sbjct: 259 LRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGW-IVATIGV 317
Query: 793 KT------------SHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDEL 840
T +H +F S LF +I GV+ ++
Sbjct: 318 GTPFALTAAVVHTLAH---ALFK---SSLFMLI----------GVVD-------HQAGTR 354
Query: 841 DI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ-KIWLLLLIIM 897
DI L +R P+ + + I S+A PP GF +K + E ++L+++
Sbjct: 355 DIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLV 414
Query: 898 CSLIGA 903
+ +GA
Sbjct: 415 GAALGA 420
>gnl|CDD|237167 PRK12667, PRK12667, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 520
Score = 151 bits (384), Expect = 1e-38
Identities = 102/383 (26%), Positives = 183/383 (47%), Gaps = 37/383 (9%)
Query: 225 WIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLDI---KKKLAEYMSAFLILSGLII 281
W I Y +D L LTA + +I++ S + Y + L L ++
Sbjct: 70 WPAPIGIVYE--VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGML 127
Query: 282 GAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRS-YAAIKFFLYTLMGSLLMLISMIYL 340
G D ++ E I + ++ + + AAIK+ L +G+ L +++ +L
Sbjct: 128 GILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFL 187
Query: 341 YYISNKSFNILSWHQLSITKIEQIWLFIT-----------------FFIAFAIKIPIWPM 383
Y +F L+ LS KI + +T AF IK I+P
Sbjct: 188 YA----TFGTLNMADLSA-KIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPN 242
Query: 384 HTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYY------FSNLIITLS 437
H WLPDAH AP+ S +L+ +++ +G Y ++RF IF + S ++I L
Sbjct: 243 HFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSPILIILG 302
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
+S I +L+ +VQ D+K+L+AYS+I+HMG++ +GI + T++ + A+ +I+HA+ S
Sbjct: 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSL 362
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
+F++ G + TR I G+ +P S F+I +L+ +P +GF + ++ +
Sbjct: 363 LFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNAL 422
Query: 558 VKFNFCIGVLTSTALIFSAAYSL 580
++ F + L L+ ++A SL
Sbjct: 423 LESGFYLPAL---VLLIASAISL 442
Score = 129 bits (327), Expect = 3e-31
Identities = 68/184 (36%), Positives = 106/184 (57%), Gaps = 14/184 (7%)
Query: 48 MAKSAQFPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRM--------SPLFELSN 98
K+A FP H WLPD+ P+P SA++ + +V G + I R L +
Sbjct: 234 TIKAAIFPNHFWLPDAHPAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLIDFRA 292
Query: 99 TALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGY--MTVGLGVS-AYTVSIFH 155
I++ +GA++A L+ ++Q D+KR++AYST+S +GY M +G+G ++FH
Sbjct: 293 ALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFH 352
Query: 156 LMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSG 215
++ HA K+LLFL++G + I+ +DI + GL + MPI LIG LSLVG P +G
Sbjct: 353 IINHAIAKSLLFLASG-VFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNG 411
Query: 216 FYSK 219
F+SK
Sbjct: 412 FFSK 415
Score = 100 bits (250), Expect = 1e-21
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 42/414 (10%)
Query: 518 GGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAA 577
+I +I +F ++S + G+ I+ +G+LT+ +
Sbjct: 41 VSLITLILSILLFIQVYSSNKPIVYLFGGWPAPIGIVYEVDLLGALLGLLTALVMFLILI 100
Query: 578 YSLC----LSKNIIFVLGQMIMISGNN-------LLSIYLGLELMSLTLCVLIASQKNNI 626
YS S + + + +G ++++ LE++S++ L+A ++
Sbjct: 101 YSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
Query: 627 FSSEAAIKYFILGILSSGFMLYGISILYGITGTLEL---------QSIFNVIKLNNINCS 677
+ EAAIKY ++G + + ++ LY GTL + S L
Sbjct: 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPL 220
Query: 678 VLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS----TTPKLSLFVIIYRL 733
L ++L L + + K I P H W+PD + A ++ +LS ++ +Y +
Sbjct: 221 ALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTI 280
Query: 734 L--IKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
L+ IL+IL S IIG + + Q + KR++AYS+I+HMG +F I
Sbjct: 281 FGISPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMG-YIFMGIG 339
Query: 792 IKTSHNNLIIFNSCDSGLFYIITYIFAILGAF---GVIILLKNNTCNKTDELDIFIGLHQ 848
I T L + + LF+II + A F GV I T ++D GL +
Sbjct: 340 IGT---QLGL----AAALFHIINHAIAKSLLFLASGVFI-----HAAGTRDIDELAGLGR 387
Query: 849 RNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIG 902
+ P + +I SL G PP GF++K +F + E+ L++++ S I
Sbjct: 388 KMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAIS 441
>gnl|CDD|214454 MTH00198, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 607
Score = 150 bits (381), Expect = 8e-38
Identities = 109/320 (34%), Positives = 165/320 (51%), Gaps = 42/320 (13%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIA--SQKNNIFSS------EAAIKYFI 637
+I LG +++I N L+IYL LE +L L +L SQ + F S E+ +KY+I
Sbjct: 195 LIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFPSPGNTPPESGLKYWI 254
Query: 638 LGILSSGFMLYGISILYGITGTL-ELQSIFN-VIKLNNINCSVLALSLLLIIVGLSFKLG 695
LG +SSGF L+G ++ +G TG L +I + ++ NI +L L I V + FKL
Sbjct: 255 LGAMSSGFYLFGCALYFGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLA 314
Query: 696 ISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIF 755
+PFHMW PDVY+GA T L++ PK ++++++ L+I K+LL +AI
Sbjct: 315 AAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVIT---------SKLLLSVAII 365
Query: 756 SLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITY 815
SL++G A+ Q KR++AYS I H+G +L +S T + S + Y +TY
Sbjct: 366 SLVVGAFGALNQTRIKRLLAYSGIGHIGFILIG-VSAGT-------YESLQASWTYAVTY 417
Query: 816 IFAILGAFGVIILLKN-----NTCNKTDELDIFIGLHQR----------NPWCALIMMIF 860
+ + L +F VI L+ T + D L +R P+ A + I
Sbjct: 418 LVSALASFTVICTLEEFGTRTPTSRQRDGSFGNYNLVRRLVDLTILSRGQPYIAFSLAIV 477
Query: 861 MFSLAGFPPTIGFYAKFFIF 880
SLAG PP +GF K+FI
Sbjct: 478 FLSLAGIPPLLGFLGKWFIL 497
Score = 64.1 bits (156), Expect = 3e-10
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 365 WLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPD 424
+LFIT I F K+ P H W PD + APT + L AI+ K Y LL SL I
Sbjct: 302 YLFITVAILF--KLAAAPFHMWTPDVYEGAPTP-TTALIAIIPKFTVYILLT-SLVIT-- 355
Query: 425 ASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGA 484
S L++++++IS++ + A+ Q IK+L+AYS I H+GF+ +G+ T S+Q +
Sbjct: 356 -----SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAS 410
Query: 485 IIQMISHALISSAMFISIGFLY-------NQMKTRLISNFGGIINVIPHFSVF-----FI 532
+++ + + A F I L + ++ + ++ +I
Sbjct: 411 WTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNYNLVRRLVDLTILSRGQPYI 470
Query: 533 IFSLANCSL-----PGTSGFIGEFMIILSAVKFNF 562
FSLA L P GF+G++ I++ ++K F
Sbjct: 471 AFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAF 505
Score = 45.2 bits (107), Expect = 2e-04
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 40 FLINRIGAMAKSAQFPLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSN 98
+L + + K A P H W PD EG PTP +ALI T I + + L S
Sbjct: 302 YLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTS----LVITSK 357
Query: 99 TALSIILFIGAITAFFMGLLGII-QNDIKRIIAYSTLSQLGYMTVGLGVSAY 149
LS+ AI + +G G + Q IKR++AYS + +G++ +G+ Y
Sbjct: 358 LLLSV-----AIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTY 404
>gnl|CDD|236331 PRK08667, PRK08667, hydrogenase membrane subunit; Validated.
Length = 644
Score = 135 bits (342), Expect = 9e-33
Identities = 94/343 (27%), Positives = 172/343 (50%), Gaps = 29/343 (8%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDI--------KKKLAEYMSAFLILSGLIIGAFCA 286
ID L+ +FI L ++L + + SL + L ++A ILS ++G +
Sbjct: 73 FHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILS--MLGVVAS 130
Query: 287 LDGMLFYIFFE-ATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISN 345
+ F F+E L F+++ + A I +F+ T + S + L+ I + +I
Sbjct: 131 ANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQL-STVFLMLGIIVLFIQT 189
Query: 346 KSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI 405
SF + L + +F+ F+ F IK I P H WLP AH +P+ S +++ +
Sbjct: 190 GSFEL---SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGV 246
Query: 406 MLKLGCYGLLRFSLPIF-PDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464
MLK+ YGL+RF + + P+ + LI+ IS + + A+ + D+K L+AYSSI
Sbjct: 247 MLKVAVYGLVRFLMDVLSPELWWGV--LILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
Query: 465 HMGFVTLGIF-----------MLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
++G + +GI L +++ GA+ ++HAL S +F++ G + + TR
Sbjct: 305 NIGIILMGIGLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRN 364
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILS 556
I GG++ ++P+ S F++ +++ +LP +GF E ++ S
Sbjct: 365 IEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYES 407
Score = 90.9 bits (226), Expect = 1e-18
Identities = 88/372 (23%), Positives = 171/372 (45%), Gaps = 37/372 (9%)
Query: 551 FMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNI-IFVLGQMIMISGNNLLSIYLGLE 609
F+I++ V I L + S + LS +F+L + +++ N S E
Sbjct: 82 FIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWE 141
Query: 610 LMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVI 669
+M+L+ L+ + + A I YF++ LS+ F++ GI +L+ TG+ EL
Sbjct: 142 IMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL------- 194
Query: 670 KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVI 729
+ +L+L LL+ +G K GI PFH W+P + + ++ L+S + L V
Sbjct: 195 SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMS---GVMLKVA 251
Query: 730 IY---RLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLML 786
+Y R L+ L P + W ++L+ S ++G + A+ +++ K ++AYSSI ++G++L
Sbjct: 252 VYGLVRFLMDVLSP-ELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
Query: 787 FSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF------GVIILLKNNTCNKTDEL 840
I +IF ++ A+ + ++ L + + T
Sbjct: 311 MGI-------GLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTR 363
Query: 841 DI--FIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFET-------QKIWL 891
+I GL + P+ + + ++ S+A PP GF ++ ++E F++ KI L
Sbjct: 364 NIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILL 423
Query: 892 LLLIIMCSLIGA 903
++ + +L A
Sbjct: 424 FSVLAIFALTSA 435
Score = 89.8 bits (223), Expect = 4e-18
Identities = 69/236 (29%), Positives = 123/236 (52%), Gaps = 26/236 (11%)
Query: 4 NLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKA--FLINRIGAMAKSAQFPLHTWLP 61
L +FL I+ + ++ G + PL +A + + FL+ +G K+ P H WLP
Sbjct: 172 QLSTVFLMLGIIVL--FIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLP 229
Query: 62 DSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALS---IILFIGAITAFFMGL 117
+ P+ SAL+ + M+ ++ + R L ++ + L +IL G+I+A +
Sbjct: 230 YAHPASPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLAGSISALLGVI 286
Query: 118 LGIIQNDIKRIIAYSTLSQLGYMTVGLGVS--------------AYTVSIFHLMTHAFFK 163
+ ++D+K ++AYS++ +G + +G+G+ A ++FH + HA FK
Sbjct: 287 YALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALLALGGALFHSLNHALFK 346
Query: 164 ALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+LLFL+AGS++ ++I MGGL K MP T L+G +S+ P F+GF S+
Sbjct: 347 SLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
>gnl|CDD|183673 PRK12676, PRK12676, bifunctional inositol-1
monophosphatase/fructose-1,6-bisphosphatase; Reviewed.
Length = 263
Score = 125 bits (315), Expect = 1e-31
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 22/227 (9%)
Query: 960 INKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCIS 1019
I+K +E II ++L + ++ + E ++DPLD N + P Y IS
Sbjct: 46 IDKVAEDIILEVLKPLGRCVNIISEELGEIVGNGPEYTVVLDPLDGTYNAINGIPFYAIS 105
Query: 1020 IALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNN 1079
IA+ + + + +Y+ D + AI G GAYLN K I+V+K +++N++ + +
Sbjct: 106 IAVFKGGKPVYGYVYNLATGDFYEAIPGKGAYLNGKPIKVSKTSELNESAVSIYGYRRGK 165
Query: 1080 INSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFE--KGLKPWNIAAGSLLII 1137
+ + + K + +R +G +L L YVASG+LD F + L+ +IAAG L+
Sbjct: 166 ERTVK------LGRKVRRVRILGAIALELCYVASGRLDAFVDVRNYLRVTDIAAGKLICE 219
Query: 1138 ESGGIISNFKG----------EKNYLYTGDIVAGNQKIFSQIISLIN 1174
E+GGI+++ G E+ L I A +++ +I+ L+
Sbjct: 220 EAGGIVTDEDGNELKLPLNVTERTNL----IAANGEELHKKILELLE 262
>gnl|CDD|177158 MTH00095, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 527
Score = 130 bits (329), Expect = 2e-31
Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 37/255 (14%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
SN++F + L W+++G++S+ L+ F+ + + + + L NRIG
Sbjct: 94 FSNSVFTMLLSWDLLGISSFFLVLFYNNWD-SNSGAMNTALTNRIGDFFIFLFFSGFIFS 152
Query: 47 ---------------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIF 85
+ KSAQFP +WLP +M PTP S+L+H++T+VTAG+
Sbjct: 153 SYYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLI 212
Query: 86 MITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLG 145
++ S L L+ + I+L IG T FF L +++ D+K+++A STLSQ+G+ + G
Sbjct: 213 LLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFG 271
Query: 146 VSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLL 205
VS HL++HA FK+ LF+ G +I + QD RN + L+ L
Sbjct: 272 SGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLF 331
Query: 206 SLVGAPFFSGFYSKD 220
L G F SG SK+
Sbjct: 332 CLCGLMFTSGMVSKE 346
Score = 53.8 bits (130), Expect = 4e-07
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 382 PMHTWLPDAHVEAPTE-GSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
P +WLP A + APT S++ ++ ++ G L+ FS I + +++ + L +
Sbjct: 182 PFSSWLPKA-MSAPTPVSSLVHSSTLVTAGLILLMNFSYLIL---NMNVMKIMLLIGLFT 237
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFM-LTKISIQGAIIQMISHALISSAMF 499
+ + SL A+V+ D+KK++A S+++ MGF L L+ +S I ++SHAL S +F
Sbjct: 238 MFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVS----FIHLLSHALFKSCLF 293
Query: 500 ISIGFL----YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIIL 555
+ +G+L + Q R SN G + I + +F L C L TSG + + +I+
Sbjct: 294 MQVGYLIHSNFGQQDGRNYSNNGNLPMFI-QLQLLVTLFCL--CGLMFTSGMVSKELILE 350
Score = 32.2 bits (74), Expect = 1.9
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 741 LVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKT------ 794
L +N KI+L++ +F++ ++SA+ + + K+++A S+++ MG + + S +
Sbjct: 222 LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIH 281
Query: 795 --SHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPW 852
SH +F SC LF + Y+ I FG + L +FI
Sbjct: 282 LLSHA---LFKSC---LFMQVGYL--IHSNFGQ---QDGRNYSNNGNLPMFI-------- 322
Query: 853 CALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLI 901
L +++ +F L G T G +K I E F + L+ S+
Sbjct: 323 -QLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVF 370
>gnl|CDD|181406 PRK08377, PRK08377, NADH dehydrogenase subunit N; Validated.
Length = 494
Score = 128 bits (324), Expect = 4e-31
Identities = 92/323 (28%), Positives = 163/323 (50%), Gaps = 22/323 (6%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
++ +LG MI+ ++ ++++ +E+ ++T L A K ++EA++KY +LG + S F
Sbjct: 115 LLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSF 173
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
L G++++YG TGTL + I + I+ +V + L L+I GL+ + + P + W PD
Sbjct: 174 FLIGVALIYGATGTLNMAHIAQLA--GTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPD 231
Query: 706 VYQGASIIITLLLSTTP-KLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSA 764
YQ A IT++ S K L+ + L + + K+++I+A ++ +SA
Sbjct: 232 AYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFFAELSA 291
Query: 765 ITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITY----IFAIL 820
+ Q N KRMIAYSSI +G++ + +++ T D+G+F++I + L
Sbjct: 292 LRQKNVKRMIAYSSIGQVGMIALA-LALGTQ-------AGVDAGVFHMINHAIVKALLFL 343
Query: 821 GAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIF 880
V I L E++ F GL +R P AL + I S G P F++KF I
Sbjct: 344 AVGYVGITLGGT------EIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
Query: 881 EKIFETQKIWLLLLIIMCSLIGA 903
W + L++ S++ A
Sbjct: 398 LAGLSAGYTWPVALVLGASVVEA 420
Score = 115 bits (289), Expect = 1e-26
Identities = 86/364 (23%), Positives = 173/364 (47%), Gaps = 16/364 (4%)
Query: 239 GLSLWFIPLTAFITLIIILISLDI---------KKKLAEYMSAFLILSGLIIGAFCALDG 289
G++L+ P A LII ++S + + + +Y FL+L G D
Sbjct: 71 GINLYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDI 130
Query: 290 MLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFN 349
++F E T I + + + A++K+ + +GS LI + L Y + + N
Sbjct: 131 FNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIG-VALIYGATGTLN 189
Query: 350 ILSWHQLSIT---KIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIM 406
+ QL+ T + Q+ L + F A++ ++P++ W PDA+ AP +V+ +A +
Sbjct: 190 MAHIAQLAGTIDPTVAQVGLALLIF-GLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFV 248
Query: 407 LKLGCYGLLRFSLPIFPDASY-YFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465
+K G Y + R + + L+I ++ +++ + L A+ Q ++K++IAYSSI
Sbjct: 249 VKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQ 308
Query: 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIP 525
+G + L + + T+ + + MI+HA++ + +F+++G++ + I F G+ +P
Sbjct: 309 VGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMP 368
Query: 526 HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFC-IGVLTSTALIFSAAYSLCLSK 584
++ I +L+ +P + F +F IIL+ + + L A + A Y L
Sbjct: 369 LTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIH 428
Query: 585 NIIF 588
+ F
Sbjct: 429 TMWF 432
Score = 110 bits (276), Expect = 4e-25
Identities = 61/181 (33%), Positives = 104/181 (57%), Gaps = 9/181 (4%)
Query: 46 GAMAKSAQFPLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSN---TAL 101
G ++ FPL+ W PD+ + P P + + +A +V AG++ + R+ L + +N + L
Sbjct: 215 GLAVEAELFPLNAWAPDAYQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVL 273
Query: 102 SIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV---SAYTVSIFHLMT 158
+++ + +T FF L + Q ++KR+IAYS++ Q+G + + L + + +FH++
Sbjct: 274 KLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMIN 333
Query: 159 HAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYS 218
HA KALLFL+ G + I + + I GL K MP+T + IG LS VG P F+ F+S
Sbjct: 334 HAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWS 392
Query: 219 K 219
K
Sbjct: 393 K 393
>gnl|CDD|235805 PRK06458, PRK06458, hydrogenase 4 subunit F; Validated.
Length = 490
Score = 126 bits (320), Expect = 2e-30
Identities = 63/194 (32%), Positives = 108/194 (55%), Gaps = 1/194 (0%)
Query: 367 FITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDAS 426
F+ I F K+ ++PMH WLPDAH EAP+ S +L+ ++L + Y +LR+ + I
Sbjct: 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIG 276
Query: 427 YYF-SNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAI 485
F L++ L+S++ + + Q DIK+L AYSSI HMG + + + + I A+
Sbjct: 277 SDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAAL 336
Query: 486 IQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTS 545
+ M++H+L SA+F + G + + TR I+ G++ V P ++ +LA +P
Sbjct: 337 LHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFG 396
Query: 546 GFIGEFMIILSAVK 559
FI EF+I+ + +
Sbjct: 397 VFISEFLILTAGLA 410
Score = 96.5 bits (241), Expect = 1e-20
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 15/190 (7%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASA-----LIHAATMVTAGIFMITRMSP 92
AF+ IG K FP+H WLPD+ E P+P SA L++ A +++ +
Sbjct: 216 AFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAI 275
Query: 93 LFELSNTALSII-LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---A 148
+ L I L + AFF+ + Q DIKR+ AYS++ +G + LG+
Sbjct: 276 GSDFPGRLLLIFGLLSVLVAAFFL----LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLG 331
Query: 149 YTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLV 208
++ H++ H+ K+ +F ++G+++ +DI + GL K P+T ++G L++
Sbjct: 332 IFAALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLMLGALAIA 390
Query: 209 GAPFFSGFYS 218
G P F F S
Sbjct: 391 GMPPFGVFIS 400
Score = 76.5 bits (189), Expect = 3e-14
Identities = 80/357 (22%), Positives = 164/357 (45%), Gaps = 40/357 (11%)
Query: 564 IGVLTSTALIFSAAY-------------SLCL--SKNIIFVLGQMIMISGNNLLSIYLGL 608
+G LTS ++S Y +L L +F+ ++ ++ NNL +++ +
Sbjct: 81 VGFLTS---LYSIGYMRHEVEHGELSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAI 137
Query: 609 ELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTL---ELQSI 665
E +L+ L+ S EAA KY I+ + F L+G ++Y T+ +I
Sbjct: 138 EATTLS-SALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILVYANAATVMGDGEMAI 196
Query: 666 F--NVIKLN-NINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS-TT 721
++K ++ +++ L+ + +++G K+G+ P H W+PD + A ++ LLS
Sbjct: 197 LWTELLKHASLLDPTLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVL 256
Query: 722 PKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAH 781
++L+ ++ ++ ++LLI + S+++ + Q + KR+ AYSSI H
Sbjct: 257 LNVALYAVLRYYILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEH 316
Query: 782 MGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF-GV-IILLKNNTCNKTDE 839
MGL+ F++ L IF + L +++ + F +L K T +
Sbjct: 317 MGLIAFAL----GIGGPLGIF----AALLHMLNHSLTKSAIFFASGNVLQKYG----TRD 364
Query: 840 LDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLII 896
+++ GL + +P +M+ ++AG PP F ++F I + + +L++
Sbjct: 365 INVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLL 421
>gnl|CDD|130019 TIGR00944, 2a6301s04, Multicomponent K+:H+antiporter. [Transport
and binding proteins, Cations and iron carrying
compounds].
Length = 463
Score = 126 bits (317), Expect = 2e-30
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 21/369 (5%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLD---IKKKLAEYMSAFLILSGLIIGAFCALDGML 291
L +D S + T+ I L + L S+ ++ Y S L + GAF D
Sbjct: 70 LVLDRFSALLLCTTSIIALAVQLYSMARWGTARERHHYYSLVQFLLAGLNGAFLTGDLFN 129
Query: 292 FYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYY--------- 342
++FFE L + ++ + +K+ L+ S L +I + LY
Sbjct: 130 LFVFFEMMLAASYGLLVHGSTKIQLKEGLKYIAVNLVSSALFVIGVSLLYGVAGTLNMAD 189
Query: 343 ISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVIL 402
+S K L + ++ + F +K ++P+ WLP A+ P + +
Sbjct: 190 LSTKLAA-LEPRSRGLVEM----GSALLGVVFLVKAGMFPLSFWLPTAYYAPPPPIAAVF 244
Query: 403 AAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSS 462
A++ K+G Y ++R L +F A+ + ++TL++++II+ + + ++ K+ Y+
Sbjct: 245 GALLTKVGIYAIIRLHLLVFGTAAGFGHEWLVTLAMLTIIFGGIGVLAYQNMGKIAGYNV 304
Query: 463 IAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIIN 522
+ +G + G+ + T + GAI ++ L A+F+ IG + T + +GG+I
Sbjct: 305 LVAVGVILAGVALGTDGMLAGAIYYLVHDMLTKGALFLLIGLVIRGTGTATLEAYGGLIK 364
Query: 523 VIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCL 582
P F I +L+ +P SGFIG+F II F +G T L+ ++ ++
Sbjct: 365 RYPVLGWCFFICALSLAGIPPLSGFIGKFAIISGL----FDMGDWTYVTLLLLSSLAVLY 420
Query: 583 SKNIIFVLG 591
S N IF+
Sbjct: 421 SVNRIFIRT 429
Score = 89.8 bits (223), Expect = 2e-18
Identities = 67/302 (22%), Positives = 133/302 (44%), Gaps = 16/302 (5%)
Query: 602 LSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLE 661
L ++ + L + ++ S K + + +KY + ++SS + G+S+LYG+ GTL
Sbjct: 130 LFVFFEMMLAASYGLLVHGSTKIQL---KEGLKYIAVNLVSSALFVIGVSLLYGVAGTLN 186
Query: 662 LQSIFNVI-KLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASI-IITLLLS 719
+ + + L + ++ + L+ V K G+ P W+P Y I + +
Sbjct: 187 MADLSTKLAALEPRSRGLVEMGSALLGVVFLVKAGMFPLSFWLPTAYYAPPPPIAAVFGA 246
Query: 720 TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSI 779
K+ ++ II RL + + L+ LA+ ++I G + + N ++ Y+ +
Sbjct: 247 LLTKVGIYAII-RLHLLVFGTAAGFGHEWLVTLAMLTIIFGGIGVLAYQNMGKIAGYNVL 305
Query: 780 AHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDE 839
+G++L + + ++ ++Y++ + F +I L+ T T
Sbjct: 306 VAVGVILAGV---ALGTDGMLA-----GAIYYLVHDMLTKGALFLLIGLVIRGT--GTAT 355
Query: 840 LDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCS 899
L+ + GL +R P I SLAG PP GF KF I +F+ + L+++ S
Sbjct: 356 LEAYGGLIKRYPVLGWCFFICALSLAGIPPLSGFIGKFAIISGLFDMGDWTYVTLLLLSS 415
Query: 900 LI 901
L
Sbjct: 416 LA 417
Score = 78.7 bits (194), Expect = 6e-15
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALS--IILFI 107
K+ FPL WLP + P P A + A + GI+ I R+ L + ++ +
Sbjct: 219 KAGMFPLSFWLPTAYYAPPPPIAAVFGALLTKVGIYAIIRLHLLVFGTAAGFGHEWLVTL 278
Query: 108 GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV---SAYTVSIFHLMTHAFFKA 164
+T F G+ + ++ +I Y+ L +G + G+ + +I++L+ K
Sbjct: 279 AMLTIIFGGIGVLAYQNMGKIAGYNVLVAVGVILAGVALGTDGMLAGAIYYLVHDMLTKG 338
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
LFL G ++I + GGL K P+ I LSL G P SGF K
Sbjct: 339 ALFLLIG-LVIRGTGTATLEAYGGLIKRYPVLGWCFFICALSLAGIPPLSGFIGK 392
>gnl|CDD|215392 PLN02737, PLN02737, inositol monophosphatase family protein.
Length = 363
Score = 122 bits (309), Expect = 4e-30
Identities = 65/262 (24%), Positives = 139/262 (53%), Gaps = 21/262 (8%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
A AA+ A ++ + N+ + K + V + +KASE I +++ +P + L +
Sbjct: 83 AELAAKTGAEVVMEAVNKPRNISY--KGLTDLVTDTDKASEAAILEVVRKNFPDHLILGE 140
Query: 985 KSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIA-LKQKKQITHSVIY---DPI--R 1038
+ + + ++ +W IDPLD TNF+H +P + +S+ L + +V+ P+
Sbjct: 141 EGGVIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGTPAAATVVEFVGGPMCWN 200
Query: 1039 NDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKN------NIN-SEEYAKIFQI 1091
F+A G GA+ N ++I V++ +K+ +L+ T F +++ NI +E+ +
Sbjct: 201 TRTFSASAGGGAFCNGQKIHVSQTDKVERSLLVTGFGYEHDDAWATNIELFKEFTDV--- 257
Query: 1092 ITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKN 1151
+ +R +G +++++ +VA G ++ ++E LKPW++AAG L++ E+GG ++ G K
Sbjct: 258 ---SRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLIVEEAGGTVTRMDGGKF 314
Query: 1152 YLYTGDIVAGNQKIFSQIISLI 1173
++ ++ N + +++ I
Sbjct: 315 SVFDRSVLVSNGVLHPKLLDRI 336
>gnl|CDD|235820 PRK06521, PRK06521, hydrogenase 4 subunit B; Validated.
Length = 667
Score = 127 bits (321), Expect = 6e-30
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 23/200 (11%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDSM-EGPTPASALIHAATMVTAGIFMITRMSPLFELS 97
FL+ G AK+ PLH WLP + P+ SAL+ + M+ I+ I R+ F+L
Sbjct: 212 VFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALM-SGVMLKVAIYGILRVV--FDLL 268
Query: 98 NTALS----IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS------ 147
++L +GAI+A L + ++D+KR++AYST+ +G + VGLG++
Sbjct: 269 GAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMVFIAY 328
Query: 148 --------AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCIT 199
A T +++HL+ HA FK+LLFL AG+++ +D+ +GGL + MP T
Sbjct: 329 GMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWA 387
Query: 200 SLIGLLSLVGAPFFSGFYSK 219
LIG L++ P +GF S+
Sbjct: 388 FLIGCLAISALPPLNGFVSE 407
Score = 111 bits (279), Expect = 7e-25
Identities = 73/245 (29%), Positives = 131/245 (53%), Gaps = 15/245 (6%)
Query: 323 FLYTLM---GSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIP 379
FLY LM G+L +L++ L S S++ + ++ +F+ F K
Sbjct: 167 FLYLLMAHAGALAILLAFGLLARESG-SYDFAAMRAAHLSPFWASLVFLLALFGFGAKAG 225
Query: 380 IWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLI 439
+ P+H WLP AH AP+ S +++ +MLK+ YG+LR + +++ L++ L I
Sbjct: 226 LVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAI 285
Query: 440 SIIYISLIAMVQIDIKKLIAYSSIAHMG--FVTLGIFM---------LTKISIQGAIIQM 488
S + L A+ + D+K+L+AYS+I ++G FV LG+ M L +++ A+ +
Sbjct: 286 SAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMVFIAYGMPLLAALALTAALYHL 345
Query: 489 ISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFI 548
++HAL S +F+ G + + TR + GG+I +P + F+I LA +LP +GF+
Sbjct: 346 LNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFV 405
Query: 549 GEFMI 553
E+++
Sbjct: 406 SEWLL 410
Score = 74.5 bits (184), Expect = 2e-13
Identities = 73/367 (19%), Positives = 165/367 (44%), Gaps = 31/367 (8%)
Query: 555 LSAVKFNFCIGVLTSTALIFSAAY----------SLCLSKNIIFVLGQMIMISGNNLLSI 604
LSA F I +L + A ++S Y ++ N+ F+ ++++ ++ S
Sbjct: 81 LSAF-FLLVISLLGAAASLYSLGYFREYEGKGPGAMGFFYNL-FLASMVLVLLADDAFSF 138
Query: 605 YLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQS 664
+ E MSL+ L+ + A Y ++ + +L +L +G+ +
Sbjct: 139 LVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYD--- 195
Query: 665 IFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLS-TTPK 723
F ++ +++ +L LL + G K G+ P H+W+P + A ++ L+S K
Sbjct: 196 -FAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLK 254
Query: 724 LSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMG 783
++++ I+ R++ L W ++L L S ++G + A+ +++ KR++AYS+I ++G
Sbjct: 255 VAIYGIL-RVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIG 313
Query: 784 LMLFSI---ISIKTSHNNLIIFNSCDSGLFYIITYIF----AILGAFGVIILLKNNTCNK 836
++ + + L+ + + L++++ + LGA V+
Sbjct: 314 IIFVGLGLAMVFIAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVL------HATG 367
Query: 837 TDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLII 896
T +++ GL +R PW A +I +++ PP GF +++ + + + + + L +
Sbjct: 368 TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSPGLPQWGLKL 427
Query: 897 MCSLIGA 903
+ A
Sbjct: 428 AVPIAAA 434
>gnl|CDD|237168 PRK12668, PRK12668, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 581
Score = 125 bits (315), Expect = 2e-29
Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 12/193 (6%)
Query: 30 PLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITR 89
+A A+LI IG +A PLH WLPD+ T ++ +A ++ + R
Sbjct: 177 AIAGLGGTAAWLI-LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR 235
Query: 90 MSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV-SA 148
P E ++++IGA A + +++ND++R+++Y +SQ+GYM G+G+ +A
Sbjct: 236 AFPGTE-------LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTA 288
Query: 149 YTV--SIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLS 206
+ ++ H H +K LLF+SAG+++ + + +GGLY+ MP+T + L+G LS
Sbjct: 289 LAINGAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALFCLVGALS 347
Query: 207 LVGAPFFSGFYSK 219
+ P FSGF SK
Sbjct: 348 ISAFPLFSGFVSK 360
Score = 96.9 bits (242), Expect = 2e-20
Identities = 82/324 (25%), Positives = 156/324 (48%), Gaps = 18/324 (5%)
Query: 234 FLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFY 293
+D LS F + + I ++ +L +K ++++A L + +GA A D + +
Sbjct: 62 LGRVDKLSRVFGLIFGIMAFIGVIYALHVKDPG-QHVAALLYVGS-ALGAVFAGDLLTLF 119
Query: 294 IFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSW 353
+F+E ++ G A ++ L ++G +L+L ++ L+Y SF +
Sbjct: 120 VFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGIL-LHYAETGSFAFGA- 177
Query: 354 HQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYG 413
++ WL I F + P+H WLPDA+ EA GSV L+A K Y
Sbjct: 178 --IAGLGGTAAWLI---LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYA 232
Query: 414 LLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGI 473
L R FP L+I + +Y A+++ D+++L++Y ++ +G++ GI
Sbjct: 233 LAR----AFPGT-----ELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGI 283
Query: 474 FMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFII 533
+ T ++I GA+ +H L +F+S G + + T ++ GG+ +P ++F ++
Sbjct: 284 GIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLV 343
Query: 534 FSLANCSLPGTSGFIGEFMIILSA 557
+L+ + P SGF+ + MII +A
Sbjct: 344 GALSISAFPLFSGFVSKSMIISAA 367
Score = 63.0 bits (154), Expect = 7e-10
Identities = 79/371 (21%), Positives = 156/371 (42%), Gaps = 52/371 (14%)
Query: 543 GTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSLCLSKNIIFVLGQMIMISGN--- 599
T F+G +++ K + G++ Y+L + V ++ +
Sbjct: 51 LTVTFLGFDLVLGRVDKLSRVFGLIFGIMAFIGVIYALHVKDPGQHVAA-LLYVGSALGA 109
Query: 600 ----NLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYG 655
+LL++++ ELM+ T L+ ++ + A +Y ++ +L +L GI + Y
Sbjct: 110 VFAGDLLTLFVFWELMAFTSTFLVWARGTKA-AVRAGFRYLLVHVLGGVLLLAGILLHYA 168
Query: 656 ITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIIT 715
TG+ +I + + LI++G P H W+PD Y A++ +
Sbjct: 169 ETGSFAFGAIA----------GLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGS 218
Query: 716 LLLST-TPKLSLFVIIYR------LLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
+ LS T K +++ + R LLI + I +A++ G A+ +
Sbjct: 219 VFLSAFTTKTAVYA-LARAFPGTELLI---------Y--IGAAMAVY----GVFFALLEN 262
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828
+ +R+++Y ++ +G M+ I I T+ + N + F I Y + + G ++
Sbjct: 263 DLRRLLSYHIVSQVGYMVAG-IGIGTA----LAINGAVAHAFNHILYKGLLFMSAGAVLY 317
Query: 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888
K EL GL++ P AL ++ S++ FP GF +K I E
Sbjct: 318 RTGT--EKLTELG---GLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHY 372
Query: 889 IWLLLLIIMCS 899
+W+ LL+++ S
Sbjct: 373 VWVWLLLLLAS 383
>gnl|CDD|236252 PRK08376, PRK08376, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 521
Score = 124 bits (312), Expect = 2e-29
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 29/320 (9%)
Query: 578 YSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFI 637
Y+L L + LG + M +L + ++ LE+MS+ L+A + + + EA IKY
Sbjct: 124 YTLIL----LLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMF 179
Query: 638 LGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGIS 697
+G L+S +L GI++LYG GTL + + + N + +AL+L I GL+ K G
Sbjct: 180 VGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALF--IAGLAMKSGAV 237
Query: 698 PFHMWVPDVYQGASIIITLLLSTTPKLS---LFVIIYRLLIKCLLPLVINWQKILLILAI 754
P HMW+PD Y A I+ +L + L +++ + + + W +++IL
Sbjct: 238 PVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGW--VIIILGC 295
Query: 755 FSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLF----SIISIKTSHNNLIIFNSCDSGLF 810
++ +G A+ Q + KR++AY S++ +G ML + ++ + G++
Sbjct: 296 LTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLAALGDPAMASYGEIALAGGIY 355
Query: 811 YIITYI------FAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSL 864
+I+ + F GA VI T L+ GL + P + +I ++
Sbjct: 356 HIVNHALYKALLFLTAGA--VIYET------GTRNLNELGGLARTMPKTTIAFLIGAAAI 407
Query: 865 AGFPPTIGFYAKFFIFEKIF 884
G PP GF +K+ I+E
Sbjct: 408 VGLPPFNGFASKWLIYESSA 427
Score = 117 bits (294), Expect = 4e-27
Identities = 83/283 (29%), Positives = 133/283 (46%), Gaps = 72/283 (25%)
Query: 4 NLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIGAMA-------------- 49
+LF F+ EI+ +ASY L+ F D AI A +K + + +
Sbjct: 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGT 201
Query: 50 -------------------------------KSAQFPLHTWLPDSM-EGPTPASALIHAA 77
KS P+H WLPD+ P+ SA++
Sbjct: 202 LNMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVI 261
Query: 78 TMVTAGIFMITRMSPLFELSNTALS------IILFIGAITAFFMGLLGIIQNDIKRIIAY 131
AG++ + R+ LF + A++ +I+ +G +T F + ++Q D+KR++AY
Sbjct: 262 KQ--AGLYALARV--LFSIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
Query: 132 STLSQLGYMTVGLGVS---------------AYTVSIFHLMTHAFFKALLFLSAGSIIIN 176
++SQ+GYM +GLGV A I+H++ HA +KALLFL+AG++I
Sbjct: 318 HSVSQIGYMLLGLGVGLAALGDPAMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYE 377
Query: 177 MKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+++ +GGL + MP T I LIG ++VG P F+GF SK
Sbjct: 378 TG-TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASK 419
Score = 113 bits (284), Expect = 7e-26
Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 28/364 (7%)
Query: 237 IDGLSLWFIPLTAFITLIIILISLDIKKK---LAEYMSAFLILSGLIIGAFCALDGMLFY 293
+D + + ++ + +L S+ K L +Y + L+L ++G D F+
Sbjct: 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFF 147
Query: 294 IFFEATLIPIFIIIG----TWGGSNRSYAAIKFFLYTLMGSLLML--ISMIYLYYISNKS 347
+F E I + ++ TW A IK+ + S ++L I+++Y Y +
Sbjct: 148 VFLEIMSIASYALVAFRNDTWEAIE---AGIKYMFVGSLASSMVLLGIALLYGQYGTLNM 204
Query: 348 FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIML 407
+ + T + +I L + F A+K P+H WLPDA+ AP+ S +L I
Sbjct: 205 AYLAVKMSENPTVVAKIALAL-FIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQ 263
Query: 408 KLGCYGLLRFSLPIFPDA--SYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465
G Y L R I+ A +II L +++ +A+VQ D+K+L+AY S++
Sbjct: 264 A-GLYALARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
Query: 466 MGFVTL--GIFMLT----------KISIQGAIIQMISHALISSAMFISIGFLYNQMKTRL 513
+G++ L G+ + +I++ G I +++HAL + +F++ G + + TR
Sbjct: 323 IGYMLLGLGVGLAALGDPAMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRN 382
Query: 514 ISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALI 573
++ GG+ +P ++ F+I + A LP +GF +++I S+ FN +GV+ +
Sbjct: 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSV 442
Query: 574 FSAA 577
+ A
Sbjct: 443 LTLA 446
>gnl|CDD|237163 PRK12663, PRK12663, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 497
Score = 123 bits (310), Expect = 3e-29
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 20/355 (5%)
Query: 238 DGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAF---LILSGLIIGAFCALDGMLF-- 292
D LS + +F+ I+ + L+L +IG+F L G LF
Sbjct: 76 DSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSF--LTGDLFNL 133
Query: 293 YIFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNIL 351
Y++FE LI F++I T G AIK+ + L+GS L L+ + LY +F L
Sbjct: 134 YVWFEVMLIASFVLI-TLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLY----GTFGTL 188
Query: 352 SWHQLS--ITKIEQ----IWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI 405
+ ++ + + + + F +AF +K ++P WLP A+ TE + + AA+
Sbjct: 189 NMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAAL 247
Query: 406 MLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465
+ K+G Y L+R +FP L+ T++ I+++ +L A+ DI+++ Y I+
Sbjct: 248 LTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISS 307
Query: 466 MGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIP 525
+GF+ LG+ + T I GAI ++ ++ +A+F+ G L R + GG+ P
Sbjct: 308 IGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEP 367
Query: 526 HFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYSL 580
F F+I A LP SGF G+ +++ A+ I + YSL
Sbjct: 368 LFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
Score = 86.2 bits (214), Expect = 3e-17
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 49 AKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITR-MSPLFELSNTALSIILFI 107
K+A FP WLP + P A + AA + GI+ + R + LF L +L
Sbjct: 219 MKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLAT 277
Query: 108 GAITAFFMGLLGII-QNDIKRIIAYSTLSQLGYMTVGLGV---SAYTVSIFHLMTHAFFK 163
A +G LG + DI+RI Y +S +G++ +GL + + +IF+L+ K
Sbjct: 278 MAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVK 337
Query: 164 ALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
LFL AG ++ + + ++ +GGLY+ P+ LI + ++ G P FSGF+ K
Sbjct: 338 TALFLIAG-SLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGK 392
Score = 85.0 bits (211), Expect = 6e-17
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 27/308 (8%)
Query: 601 LLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITG 658
L ++Y+ E+M + VLI ++ + AIKY +L ++ S L GI +LYG G
Sbjct: 130 LFNLYVWFEVMLIASFVLITLGQEREQL---RGAIKYVVLNLIGSWLFLLGIGLLYGTFG 186
Query: 659 TLELQSIFNVIKLNNI--NCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL 716
TL + I ++LN++ ++ ++LL ++ K + PF MW+P Y + +
Sbjct: 187 TLNMAHI--AMRLNDMGDTATLTTIALLFLLA-FGMKAALFPF-MWLPAAYHTPNTEVAA 242
Query: 717 LLSTTPKLSLFVIIYRLLIKCLLPLVIN---WQKILLILAIFSLIIGNVSAITQYNFKRM 773
L + L V IY L+ L +L +A +++IG + A+ + +R+
Sbjct: 243 LFAA---LLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRI 299
Query: 774 IAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNT 833
Y I+ +G +L + + N IF + + T +F I G+ +
Sbjct: 300 AGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMV--VKTALFLIAGSLVRL------- 350
Query: 834 CNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLL 893
L GL+++ P + +I +F++ G PP GF+ K + + + LL
Sbjct: 351 -TGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLA 409
Query: 894 LIIMCSLI 901
L+++ SLI
Sbjct: 410 LMLITSLI 417
>gnl|CDD|238821 cd01643, Bacterial_IMPase_like_2, Bacterial family of Mg++ dependent
phosphatases, related to inositol monophosphatases. These
enzymes may dephosphorylate inositol monophosphate or
similar substrates.
Length = 242
Score = 117 bits (294), Expect = 3e-29
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 949 EEKKYENFVFNINKASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITN 1008
E K + V ++ E++I L +P L ++ + W+IDP+D TN
Sbjct: 26 ETKADGSLVTAADRWVEQLIRARLAAQFPDDGVLGEEGG-GIFPSSGWYWVIDPIDGTTN 84
Query: 1009 FSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDA 1068
F+ P + ISIAL + + VI P N F A KG GA+LN K + ++ ++ D
Sbjct: 85 FARGIPIWAISIALLYRGEPVFGVIALPALNQTFVAFKGGGAFLNGKPLALHPPLQLPDC 144
Query: 1069 LIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWN 1128
+G + S + ++ ++ K +R +G++SLNLA VA+G+ G+ E K W+
Sbjct: 145 NVGFNRSSR--ASARAVLRVILRRFPGK-IRMLGSASLNLASVAAGQTLGYVEATPKIWD 201
Query: 1129 IAAGSLLIIESGGIISNFKGEKNYLYTGD 1157
IAA +++ E+GG + E +L T D
Sbjct: 202 IAAAWVILREAGGSWTILDEEPAFLQTKD 230
>gnl|CDD|181537 PRK08676, PRK08676, hydrogenase membrane subunit; Validated.
Length = 485
Score = 121 bits (305), Expect = 8e-29
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 8/303 (2%)
Query: 263 KKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKF 322
+ L + F +L +I AF + + LF+IF E T + ++I AA+K+
Sbjct: 98 PENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKY 157
Query: 323 FLYTLMGSLLMLISMIYLYYISNKSFNI--LSWHQLS--ITKIEQIWLFITF---FIAFA 375
+ I +I+L+ ++ ++ L+W +L+ + + L +F FI F
Sbjct: 158 IFIASTAMIFAFIGLIFLFSLTRQALGTGTLNWTELAAHASLLSPSVLGASFLFIFIGFL 217
Query: 376 IKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLR-FSLPIFPDASYYFSNLII 434
K + P HTWLP A+ +AP+ S +L+ +L +G YG+LR +L A+ FSN++I
Sbjct: 218 AKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLI 277
Query: 435 TLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALI 494
L + SI + + Q ++KKLIA+SSI HMG + LGI + T +++ + M++H+L+
Sbjct: 278 GLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
Query: 495 SSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII 554
S +F S G L+ Q ++ + + P + I+ S A +P F+ +F I+
Sbjct: 338 KSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
Query: 555 LSA 557
L
Sbjct: 398 LQL 400
Score = 88.3 bits (219), Expect = 6e-18
Identities = 92/316 (29%), Positives = 155/316 (49%), Gaps = 29/316 (9%)
Query: 599 NNLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGI 656
+NL ++ EL ++ +LIA S + NI +AA+KY + + F G+ L+ +
Sbjct: 122 DNLALFWIFAELTTVFSAMLIAILSARENI---DAALKYIFIASTAMIFAFIGLIFLFSL 178
Query: 657 T------GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGA 710
T GTL + L ++ SVL S L I +G K G+ PFH W+P Y A
Sbjct: 179 TRQALGTGTLNWTELAAHASL--LSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKA 236
Query: 711 SIIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
+++ LLS T + ++ I+ + + +L+ L IFS+ + S ++Q N
Sbjct: 237 PSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRN 296
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGA-FGVIIL 828
K++IA+SSI HMGLML I I T L +F LF+++ + G F IL
Sbjct: 297 LKKLIAFSSIEHMGLMLLG-IGIGTP---LALFWM----LFHMLAHSLVKSGLFFSAGIL 348
Query: 829 LKNNTCNKTDEL-DIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQ 887
+ ++ D + D+F + P A +++ ++ G PP F +KFFI ++
Sbjct: 349 HRQYRSDRFDRIFDVF----RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGIS 404
Query: 888 KIWLLLLIIMCSLIGA 903
+WL+L +++ L+ A
Sbjct: 405 -VWLVLAVLLLLLLAA 419
Score = 85.6 bits (212), Expect = 4e-17
Identities = 65/230 (28%), Positives = 119/230 (51%), Gaps = 23/230 (10%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMSPLFELS 97
+FL IG +AKS P HTWLP + + P+ SAL+ + T++ GI+ I R+S L S
Sbjct: 208 SFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQS 266
Query: 98 N---TALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS---AYTV 151
++++ +G + + Q ++K++IA+S++ +G M +G+G+ A
Sbjct: 267 GAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFW 326
Query: 152 SIFHLMTHAFFKALLFLSAGSIIINMKHNQDIR-NMGGLYKYMPITCITSLIGLLSLVGA 210
+FH++ H+ K+ LF SAG I++ ++ D + +++ P+ ++G +++G
Sbjct: 327 MLFHMLAHSLVKSGLFFSAG--ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGM 384
Query: 211 PFFSGFYSKDKKKIWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISL 260
P F F SK F I LG G+S+W + L + L++ S
Sbjct: 385 PPFPLFLSK---------FFILLQLG--GISVW-LVLAVLLLLLLAASSF 422
>gnl|CDD|237165 PRK12665, PRK12665, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 521
Score = 120 bits (304), Expect = 2e-28
Identities = 81/294 (27%), Positives = 156/294 (53%), Gaps = 17/294 (5%)
Query: 269 YMSAFLILSGLIIGAFCALDGMLF--YIFFEATLIPIFIIIGTWGGS-NRSYAAIKFFLY 325
++ +LIL + AF L G LF Y+ FE L+ ++++ T G + R A + + +
Sbjct: 113 FLPTYLILVAGVSNAF--LAGDLFNLYVGFEILLVASYVLL-TLGATAARVRAGVTYVMV 169
Query: 326 TLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIE-----QIWLFITFFIAFAIKIPI 380
+++ SLL LI I L Y + + N+ L++ E + LF +AF IK +
Sbjct: 170 SMVSSLLFLI-GIALVYAATGTLNMA---DLAVRLDELPSGTRTALFAVLLVAFGIKAAV 225
Query: 381 WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLIS 440
+P+ WLPD++ AP + + A ++ K+G Y ++R +FP L++ ++L++
Sbjct: 226 FPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGG--LDTLLMVVALLT 283
Query: 441 IIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFI 500
++ L A+ Q DIK+L++++ ++H+G++ GI + T + GAI + H + + +F+
Sbjct: 284 MVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFL 343
Query: 501 SIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMII 554
+G + Q + + GG+ P +V F + +L +P SGFIG+ ++
Sbjct: 344 VVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
Score = 91.6 bits (228), Expect = 6e-19
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHA--ATMVT-AGIFMITRMSPLFELSNTALSIILF 106
K+A FPL WLPDS PT A A + A A ++T G++ I R L ++++
Sbjct: 222 KAAVFPLSFWLPDSY--PT-APAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMV 278
Query: 107 IGAITAFFMGLLGII-QNDIKRIIAYSTLSQLGYMTVGLGVS---AYTVSIFHLMTHAFF 162
+ +T +G+LG I Q+DIKR+++++ +S +GYM G+ +S + +I+++ H
Sbjct: 279 VALLT-MVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITV 337
Query: 163 KALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+ LFL G +I + +R +GGL K P+ + + L+L G P FSGF K
Sbjct: 338 QTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
Score = 67.7 bits (166), Expect = 2e-11
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 37/292 (12%)
Query: 601 LLSIYLGLELM---SLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT 657
L ++Y+G E++ S L L A+ A + Y ++ ++SS L GI+++Y T
Sbjct: 133 LFNLYVGFEILLVASYVLLTLGATAAR----VRAGVTYVMVSMVSSLLFLIGIALVYAAT 188
Query: 658 GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL- 716
GTL + + ++L+ + +++V K + P W+PD Y A +T
Sbjct: 189 GTLNMADL--AVRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAV 246
Query: 717 ---LLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRM 773
LL+ K+ ++ II LL +L+++A+ ++++G + AI Q + KR+
Sbjct: 247 FAGLLT---KVGVYAIIR---THTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRL 300
Query: 774 IAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGL----FYIITYIFAILGAFGVIILL 829
++++ ++H+G M+F I S +GL +Y+ +I F V+ L+
Sbjct: 301 LSFTLVSHIGYMVFGIAL------------STVAGLSGAIYYVAHHITVQTTLFLVVGLI 348
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFE 881
+ + L GL + +P A++ + +L G PP GF K + E
Sbjct: 349 ERQA--GSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
>gnl|CDD|183662 PRK12662, PRK12662, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 492
Score = 120 bits (302), Expect = 3e-28
Identities = 88/347 (25%), Positives = 176/347 (50%), Gaps = 14/347 (4%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDI------KKKLAEYMSAFLILSGLIIGAFCALD 288
L +D LS + L FI ++ +L + K+ + SAFL+ G ++G + D
Sbjct: 72 LRVDILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSND 131
Query: 289 GMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYIS---N 345
Y+F E + I ++++ AA ++ + +G+ LI + +LY I+ N
Sbjct: 132 VFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLN 191
Query: 346 KSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI 405
L L + QI + + IK ++P H WL A+ EAP+ SV +
Sbjct: 192 MGDMFLIIQDLPTNRAIQIGVLF-IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGT 250
Query: 406 MLKLGCYGLLRFSLPIFPDASYY----FSNLIITLSLISIIYISLIAMVQIDIKKLIAYS 461
K+ Y ++R +F + F+N+ + L+ ++I++ S++A++ DIK++ AYS
Sbjct: 251 STKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYS 310
Query: 462 SIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGII 521
SI+H+G++ L + + T + A+ +++H+++ SA+F+ G + T + + +
Sbjct: 311 SISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLW 370
Query: 522 NVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLT 568
+P ++ F++ SL+ +P TSGF+ ++ I+ + +K N IG++
Sbjct: 371 KSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
Score = 108 bits (272), Expect = 1e-24
Identities = 92/320 (28%), Positives = 163/320 (50%), Gaps = 29/320 (9%)
Query: 574 FSAAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAI 633
F +A+ LCL G + ++ N++ +IY+ LE+ S++ VL+A ++ + AA
Sbjct: 112 FYSAFLLCLG-------GLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAF 163
Query: 634 KYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFK 693
+Y I+G + + F L GI LY ITGTL + +F +I+ N + + +L I+VGL K
Sbjct: 164 EYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTN-RAIQIGVLFIMVGLFIK 222
Query: 694 LGISPFHMWVPDVYQGASIIITLLLS-TTPKLSLFVII---YRLLIKCLLPLVINWQKIL 749
+ PFH W+ Y A I++ S T+ K+ +++II Y + + + + +
Sbjct: 223 AALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVF 282
Query: 750 LILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGL 809
+ILA +++ G+V AI + KR+ AYSSI+H+G ++ + +S+ T GL
Sbjct: 283 MILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILA-VSLNTY-----------YGL 330
Query: 810 FYIITYIFA---ILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAG 866
+ YI + A ++ + T L+ + L + P L ++ SL G
Sbjct: 331 AAAVAYIVNHSIVKSALFMVSGSISYHFGTTK-LEDCLNLWKSMPKITLAFVLLSLSLIG 389
Query: 867 FPPTIGFYAKFFIFEKIFET 886
PPT GF AK++I + ++
Sbjct: 390 MPPTSGFVAKWYILDAFIKS 409
Score = 70.5 bits (173), Expect = 2e-12
Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRM------SPLFELSN 98
+G K+A FP H WL + ++ + T I++I R+ + +
Sbjct: 217 VGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTL 276
Query: 99 TALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYT---VSIFH 155
++ + + A+ F +L I+ DIKRI AYS++S +GY+ + + ++ Y ++ +
Sbjct: 277 PFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAY 336
Query: 156 LMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSG 215
++ H+ K+ LF+ +GSI + + + L+K MP + ++ LSL+G P SG
Sbjct: 337 IVNHSIVKSALFMVSGSISYHFG-TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSG 395
Query: 216 FYSK 219
F +K
Sbjct: 396 FVAK 399
>gnl|CDD|177246 MTH00200, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 347
Score = 116 bits (292), Expect = 6e-28
Identities = 87/315 (27%), Positives = 153/315 (48%), Gaps = 38/315 (12%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
LG ++ S ++ I+LGLE+ +L + L+ Q + EA KYFI+ +S +L+
Sbjct: 14 GLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLF 72
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
G + +G I+ + LS LI++ L+ KLG++P H WVPDV Q
Sbjct: 73 GGLLNAWTSGQW------------GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQ 120
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
G S+ L+LST KL+ F ++ + + L ILL+L + S+++G + Q
Sbjct: 121 GLSLQTGLILSTWQKLAPFALL--IQLAPALNS-----NILLLLGLLSVLVGGWGGLNQT 173
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828
++++AYSSIAH+G +L + S + L Y++ Y+ L F +L
Sbjct: 174 QLRKILAYSSIAHLGWLL------------SGLVYSPNLALLYLLLYVIITLTVF---LL 218
Query: 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888
L K + L NP ++++ + + SL G PP GF+ K+ I +++ +
Sbjct: 219 LNLLNSTKINSLSSSKTK---NPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGL 275
Query: 889 IWLLLLIIMCSLIGA 903
++++ SL+
Sbjct: 276 FIYATILLLGSLLSL 290
Score = 63.4 bits (155), Expect = 2e-10
Identities = 74/352 (21%), Positives = 140/352 (39%), Gaps = 30/352 (8%)
Query: 269 YMSAFLILSGLIIGAFCALDGM---LFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLY 325
+ ILS L +G L ++ E + I ++ + A K+F+
Sbjct: 4 LILPLFILS-LGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFII 62
Query: 326 TLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHT 385
S L+L + + S Q I+++ +A A+K+ + P H
Sbjct: 63 QATASALLLFGGLLNAWTSG---------QWGISEMLGPLSETLILLALALKLGLAPGHF 113
Query: 386 WLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYIS 445
W+PD + +IL+ KL + LL A SN+++ L L+S++
Sbjct: 114 WVPDVLQGLSLQTGLILSTWQ-KLAPFALLIQ------LAPALNSNILLLLGLLSVLVGG 166
Query: 446 LIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFL 505
+ Q ++K++AYSSIAH+G++ G+ +++ ++ +I I+ +F+ + L
Sbjct: 167 WGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVI----ITLTVFLLLNLL 222
Query: 506 YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCI 564
+ L S+ N I + + SL LP +GF +++I+ K F
Sbjct: 223 NSTKINSLSSSKTK--NPILSMLLGLTLLSLG--GLPPLTGFFPKWLILQELSKQGLFIY 278
Query: 565 GVLTSTALIFSAAYSLCLSKNIIFVLG-QMIMISGNNLLSIYLGLELMSLTL 615
+ + S + L LS + L I + + L + L L
Sbjct: 279 ATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLVGLLLL 330
Score = 53.8 bits (130), Expect = 2e-07
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 54 FPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAF 113
P H W+PD ++G + + LI + A ++ +++P +I+L +G ++
Sbjct: 109 APGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAP-----ALNSNILLLLGLLSVL 163
Query: 114 FMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSI 173
G G+ Q +++I+AYS+++ LG++ GL S L+ ++ +
Sbjct: 164 VGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS----PNLALLY--LLLYVIITLTVFL 217
Query: 174 IINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSKDKKKIWIDYFNIYY 233
++N+ ++ I ++ PI + + LLSL G P +GF+ K + ++
Sbjct: 218 LLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFI 277
Query: 234 FLGI 237
+ I
Sbjct: 278 YATI 281
>gnl|CDD|181085 PRK07691, PRK07691, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 496
Score = 119 bits (300), Expect = 6e-28
Identities = 88/333 (26%), Positives = 165/333 (49%), Gaps = 19/333 (5%)
Query: 238 DGLSLWFIPLTAFITLIIILIS---LDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYI 294
D + + ++ IT ++IL S + I+++ Y + L + + GAF D ++
Sbjct: 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFV 135
Query: 295 FFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLY---------YISN 345
FFE L+ +++I G + +IK+ L ++ S ++++ LY IS
Sbjct: 136 FFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISV 195
Query: 346 KSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAI 405
K + + IT + I F FA K ++P++ WLP ++ P + + A+
Sbjct: 196 KIAELSAGQTGLITVV-----AILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGAL 250
Query: 406 MLKLGCYGLLR-FSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIA 464
+ K+G Y + R F+L F + + LI+ L+L++II+ + A+ DIKK+I Y+ +
Sbjct: 251 LTKVGVYAIARTFTL-FFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMI 309
Query: 465 HMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVI 524
+G + +G+ M+T+ + GAI +I ++ +A+F+ IG + T + GG+I
Sbjct: 310 AVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRY 369
Query: 525 PHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
P F I +L+ +P SGF G+F I+
Sbjct: 370 PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT 402
Score = 96.2 bits (240), Expect = 2e-20
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Query: 50 KSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALS--IILFI 107
K+ FPL+ WLP S P A A + A + G++ I R LF +T+ + +IL +
Sbjct: 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILIL 281
Query: 108 GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV---SAYTVSIFHLMTHAFFKA 164
+T F + + DIK+II Y+ + +G + VG+ + S +I++L+ KA
Sbjct: 282 ALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKA 341
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
LFL G I+I + D++ MGGL K P+ I LSL G P SGFY K
Sbjct: 342 ALFLLIG-IMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGK 395
Score = 93.1 bits (232), Expect = 2e-19
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 23/277 (8%)
Query: 632 AIKYFILGILSSGFMLYGISILYGITGTLELQSIFN-VIKLNNINCSVLALSLLLIIVGL 690
+IKY ++ ++SS F + ++ILY + GTL + I + +L+ ++ + +L +
Sbjct: 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAILFLFVF 219
Query: 691 SFKLGISPFHMWVPDVYQGASI-IITLLLSTTPKLSLFVII--YRLLIKCLLPLVINWQK 747
+ K G+ P + W+P Y I I L + K+ ++ I + L
Sbjct: 220 ATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFT---HY 276
Query: 748 ILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDS 807
++LILA+ ++I G + A+ ++ K++I Y+ + +G++L + + S
Sbjct: 277 LILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTES--------GMIG 328
Query: 808 GLFYIITYIFAILGAF---GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSL 864
++Y+I + F G++I + T +L GL +R P + I SL
Sbjct: 329 AIYYLIHDMIVKAALFLLIGIMIKI-----TGTTDLKKMGGLIKRYPVLGWMFFIAALSL 383
Query: 865 AGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLI 901
AG PP GFY KFFI E FE +++++ SL+
Sbjct: 384 AGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLL 420
>gnl|CDD|214423 MTH00112, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 346
Score = 114 bits (288), Expect = 2e-27
Identities = 88/313 (28%), Positives = 148/313 (47%), Gaps = 38/313 (12%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG +I IS N+ L + GLE+ +L + LI S+ ++ ++EAA KYF+ +S +L+
Sbjct: 15 LGTIITISSNHWLMAWTGLEINTLAIIPLI-SKPHHPRATEAATKYFLTQAAASALILFS 73
Query: 650 ISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG 709
+ TG +++ +L N S L+ + L+ KLG++PFH W+P+V QG
Sbjct: 74 STTNAWNTGQ------WDITQLTN------PTSCTLLTLALAMKLGLAPFHFWLPEVLQG 121
Query: 710 ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
++ L+LST KL+ ++ + L +LL LAI S +IG + Q
Sbjct: 122 STTTTALILSTWQKLAPLTLLL--MTSNSLN-----PTLLLTLAILSTLIGGWGGLNQTQ 174
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
++++A+SSIAH+G M I+I T L + YI F +
Sbjct: 175 LRKIMAFSSIAHLGWM----IAIITYSPKLTLLT--------FYIYILMTTPMFLTLNTT 222
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI 889
T L + ++P +M+ + SLAG PP GF K+ I +++ +
Sbjct: 223 STKT------LKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMT 276
Query: 890 WLLLLIIMCSLIG 902
++ M SL+
Sbjct: 277 PTATIMAMLSLLS 289
Score = 62.5 bits (153), Expect = 4e-10
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 24/247 (9%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
AA K+FL S L+L S N + Q IT++ +A A+K
Sbjct: 55 AATKYFLTQAAASALILFSST---------TNAWNTGQWDITQLTNPTSCTLLTLALAMK 105
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLS 437
+ + P H WLP+ + T ++IL+ KL LL + L++TL+
Sbjct: 106 LGLAPFHFWLPEVLQGSTTTTALILSTWQ-KLAPLTLLLMTSNSLN------PTLLLTLA 158
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
++S + + Q ++K++A+SSIAH+G++ I K++ ++ + L+++
Sbjct: 159 ILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLT----LLTFYIYILMTTP 214
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
MF+++ N T+ + + P + ++ L+ LP +GF+ +++I+
Sbjct: 215 MFLTL----NTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQEL 270
Query: 558 VKFNFCI 564
K N
Sbjct: 271 TKQNMTP 277
Score = 57.5 bits (140), Expect = 2e-08
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 55 PLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFF 114
P H WLP+ ++G T +ALI + A + ++ S + +++L + ++
Sbjct: 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSN-----SLNPTLLLTLAILSTLI 164
Query: 115 MGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS----AYTVSIFHLMTHAFFKALLFLSA 170
G G+ Q +++I+A+S+++ LG+M + S T I+ LMT F
Sbjct: 165 GGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMF-------- 216
Query: 171 GSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+ +N + +++M + P T ++ LLSL G P +GF K
Sbjct: 217 --LTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPK 263
>gnl|CDD|214432 MTH00144, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 328
Score = 112 bits (283), Expect = 6e-27
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 46/316 (14%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
+ V+G ++ +S ++ L +++GLE+ + L+ +K + SE+ +KYFI+ L S
Sbjct: 11 FLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKS-SESESVVKYFIIQSLGSSL 69
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
+++G I+Y N S S+ L+++GL KLG+ PFH WVP
Sbjct: 70 LIFGSLIMY--------------------NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPS 109
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
V G S + LL T K++ ++ + +L ++++ S ++G++ +
Sbjct: 110 VMAGLSWLSCFLLLTWQKVAPLFLL------SNFLDLYWLAYLLCVISVLSALVGSIGGL 163
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825
Q + ++AYSSI+H G ML +I+ Y + YI + F
Sbjct: 164 NQTQVRALLAYSSISHTGWMLVAILH------------GSWLMWMYFLIYIVSSGFLF-- 209
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
L + +L ++ L ++ + SL G PP +GF +K + E
Sbjct: 210 -FSLWSGDSGSMKDLGSLKPSYKTG----LSIISLLLSLGGLPPFLGFCSKLLVLISSME 264
Query: 886 TQKIWLLLLIIMCSLI 901
+ + L+LL+++ SLI
Sbjct: 265 SSPLLLILLLLLGSLI 280
Score = 62.2 bits (152), Expect = 4e-10
Identities = 51/263 (19%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
+ +K+F+ +GS L++ + +Y +S SW + + +K
Sbjct: 55 SVVKYFIIQSLGSSLLIFGSLIMYNLSF------SW-----------FSMSLLLLGLCLK 97
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLS 437
+ ++P H W+P +L K+ LL L Y+ + L+ +S
Sbjct: 98 LGLFPFHFWVPSVMAGLSWLSCFLLLTW-QKVAPLFLLSNFLD-----LYWLAYLLCVIS 151
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
++S + S+ + Q ++ L+AYSSI+H G++ + I + + + + S
Sbjct: 152 VLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGF 207
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
+F S+ + L S S+ ++ SL LP GF + ++++S+
Sbjct: 208 LFFSLWSGDSGSMKDLGSLKPSYKT---GLSIISLLLSLG--GLPPFLGFCSKLLVLISS 262
Query: 558 VKFNFCIGVLTSTALIFSAAYSL 580
++ + + +L L+ + SL
Sbjct: 263 MESSPLLLIL---LLLLGSLISL 282
Score = 52.6 bits (127), Expect = 5e-07
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
+G K FP H W+P M G + S + A +F++ F ++
Sbjct: 92 LGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLL 147
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKA 164
I ++A + G+ Q ++ ++AYS++S G+M V + + + + +
Sbjct: 148 CVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHG-SWLMWMYFLIYIVSSG 206
Query: 165 LLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
LF S + + ++++G L K T ++ + LLSL G P F GF SK
Sbjct: 207 FLFFS-----LWSGDSGSMKDLGSL-KPSYKTGLSIISLLLSLGGLPPFLGFCSK 255
>gnl|CDD|177167 MTH00105, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 347
Score = 111 bits (279), Expect = 3e-26
Identities = 92/312 (29%), Positives = 154/312 (49%), Gaps = 38/312 (12%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG MI + ++ L ++GLE M++ + I +K+N S+EAA KYF+ +S ++
Sbjct: 15 LGTMITMISSHWLLAWIGLE-MNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMA 73
Query: 650 ISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG 709
I I +G + + N + L+ + L+ KLG++PFH WVP+V QG
Sbjct: 74 IIINLMYSGQWTITKLTN------------PTASTLMTIALAMKLGLAPFHFWVPEVTQG 121
Query: 710 ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
+ ++L T KL+ I+Y+ + P IN +LL LAI S++IG + Q
Sbjct: 122 IPLSSGMILLTWQKLAPLSILYQ-----ISPS-IN-PNLLLTLAILSILIGGWGGLNQTQ 174
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
++++AYSSIAHMG M +I + L + N ++ YI L F +LL
Sbjct: 175 LRKILAYSSIAHMGWM----TAILPYNPTLTLLN--------LLIYIIMTLTMF---MLL 219
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI 889
N+ T L + P ++++ + SL G PP GF K+ I +++ + I
Sbjct: 220 MLNSSTTTLSLSH---TWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNI 276
Query: 890 WLLLLIIMCSLI 901
L L+ + +L+
Sbjct: 277 ILPTLMAITALL 288
Score = 52.9 bits (128), Expect = 4e-07
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 32/248 (12%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
AA K+FL S+L+++++I S Q +ITK+ IA A+K
Sbjct: 55 AATKYFLTQATASMLLMMAIIINLMYSG---------QWTITKLTNPTASTLMTIALAMK 105
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIML----KLGCYGLLRFSLPIFPDASYYFSNLI 433
+ + P H W+P+ T+G + + ++L KL +L I P + NL+
Sbjct: 106 LGLAPFHFWVPEV-----TQGIPLSSGMILLTWQKLAPLSIL---YQISPSINP---NLL 154
Query: 434 ITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHAL 493
+TL+++SI+ + Q ++K++AYSSIAHMG +M + + + + L
Sbjct: 155 LTLAILSILIGGWGGLNQTQLRKILAYSSIAHMG------WMTAILPYNPTL--TLLNLL 206
Query: 494 ISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
I M +++ L + + N P + ++ L+ LP +GF+ ++MI
Sbjct: 207 IYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMI 266
Query: 554 ILSAVKFN 561
I K N
Sbjct: 267 IQELTKNN 274
Score = 32.5 bits (75), Expect = 1.3
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 13/166 (7%)
Query: 55 PLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFF 114
P H W+P+ +G +S +I ++T + +S L+++S + +L AI +
Sbjct: 110 PFHFWVPEVTQGIPLSSGMI----LLTWQ--KLAPLSILYQISPSINPNLLLTLAILSIL 163
Query: 115 MGLL-GIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSI 173
+G G+ Q +++I+AYS+++ +G+MT L + T+++ +L+ + +F+
Sbjct: 164 IGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNP-TLTLLNLLIYIIMTLTMFM----- 217
Query: 174 IINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
++ + + ++ + P+ L+ LLSL G P +GF K
Sbjct: 218 LLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPK 263
>gnl|CDD|177116 MTH00041, ND2, NADH dehydrogenase subunit 2; Validated.
Length = 349
Score = 110 bits (277), Expect = 5e-26
Identities = 94/315 (29%), Positives = 163/315 (51%), Gaps = 42/315 (13%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
+LG +I+IS N+ I+LGLEL +L++ +++S + S EA IKYF++ S+ +L
Sbjct: 14 ILGTIIVISSNHWFLIWLGLELNTLSIIPILSSN-FSPRSVEATIKYFLVQAFSAAILLN 72
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
G I ++G+ +IN + LS ++I + L+ KLG++P H W PDV Q
Sbjct: 73 GALIQAWLSGSW------------SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQ 120
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
G + L+++T K++ +++ + I LL IL++ I S+++G + Q
Sbjct: 121 GLPFLQGLIIATWQKIAPLILL--ISISNLLN-----SNILILCGILSVLVGGWGGLNQT 173
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYII--TYIFAILGAFGVI 826
++++A+SSIAH+G + I S + + ++I+F L YII T IF I F +
Sbjct: 174 QTRKILAFSSIAHLGWI--IITSAYSPNASIIMF------LIYIIINTSIFLIGNNFSLS 225
Query: 827 ILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFET 886
L N + Q NP A + ++ + SL G PP GF KF + +
Sbjct: 226 TLSHLNKLS------------QLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQN 273
Query: 887 QKIWLLLLIIMCSLI 901
I + +++I+ SL+
Sbjct: 274 NSILISIILIIGSLL 288
Score = 58.0 bits (141), Expect = 1e-08
Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
A IK+FL + ++L + ++S SW SI I +A A+K
Sbjct: 55 ATIKYFLVQAFSAAILLNGALIQAWLSG------SW---SINGPLNTLSSIIITLALALK 105
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLS 437
+ + P H W PD P +I+A L+ S + SN++I
Sbjct: 106 LGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIS-------NLLNSNILILCG 158
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
++S++ + Q +K++A+SSIAH+G++ + S II + + +I+++
Sbjct: 159 ILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNAS----IIMFLIYIIINTS 214
Query: 498 MFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA 557
+F+ + N +S+ + + P + FI+ L+ LP +GF+ +F+ +
Sbjct: 215 IFL----IGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCL 270
Query: 558 VKFNFCIGVLTSTALIFSAAYSLCLSKNIIF 588
++ N +L S LI + SL I F
Sbjct: 271 IQNNS---ILISIILIIGSLLSLFFYLRISF 298
Score = 38.4 bits (90), Expect = 0.017
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 54 FPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAF 113
P H W PD ++G LI A A + ++ +S + +I++ G ++
Sbjct: 109 APCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIS-----NLLNSNILILCGILSVL 163
Query: 114 FMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSI 173
G G+ Q ++I+A+S+++ LG++ + SAY+ + +M F ++ ++ +
Sbjct: 164 VGGWGGLNQTQTRKILAFSSIAHLGWIII---TSAYSPNASIIM---FLIYIIINTSIFL 217
Query: 174 IINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
I N + ++ L + PI+ ++ +LSL G P +GF +K
Sbjct: 218 IGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNK 263
>gnl|CDD|238773 cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisphosphatase and
related enzymes of inositol monophosphatase family
(FBPase class IV). These are Mg++ dependent phosphatases.
Members in this family may have both
fructose-1,6-bisphosphatase and inositol-monophosphatase
activity. In hyperthermophilic archaea, inositol
monophosphatase is thought to play a role in the
biosynthesis of di-myo-inositol-1,1'-phosphate, an
osmolyte unique to hyperthermophiles.
Length = 257
Score = 106 bits (267), Expect = 2e-25
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 15/193 (7%)
Query: 990 TNFENENIWIIDPLDNITNFSHNFPQYCISIAL--KQKKQITHSVIYDPIRNDLFTAIKG 1047
E E ++DPLD N + P Y +S+A+ K + +Y+ DL+ AIKG
Sbjct: 71 NGDEPEYTVVLDPLDGTYNAINGIPFYSVSVAVFKIDKSDPYYGYVYNLATGDLYYAIKG 130
Query: 1048 CGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLN 1107
GAYLN KRI+V+ + + + KN+ + F+I K + +R G+ +L
Sbjct: 131 KGAYLNGKRIKVSDFSSLKSISVSYYIYGKNH------DRTFKICRKVRRVRIFGSVALE 184
Query: 1108 LAYVASGKLDGFFE--KGLKPWNIAAGSLLIIESGGIISNFKGEK-----NYLYTGDIVA 1160
L YVASG LD F + + L+ +IAAG L+ E+GGI+++ G++ N +I+A
Sbjct: 185 LCYVASGALDAFVDVRENLRLVDIAAGYLIAEEAGGIVTDENGKELKLKLNVTERVNIIA 244
Query: 1161 GNQKIFSQIISLI 1173
N ++ +++ L+
Sbjct: 245 ANSELHKKLLELL 257
>gnl|CDD|236171 PRK08168, PRK08168, NADH dehydrogenase subunit L; Provisional.
Length = 516
Score = 111 bits (279), Expect = 3e-25
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 47/219 (21%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG--------------- 46
S++L L W + +A + L+ F+ D+P A A K F+ +R+
Sbjct: 119 SDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEV 178
Query: 47 ----------------------------AMA---KSAQFPLHTWLPDSMEGPTPASALIH 75
+A K+AQ P+H WL ME PTP SAL+H
Sbjct: 179 GSLSLSALWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLH 238
Query: 76 AATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLS 135
A +V G F++ R +PL E + A +++ +G TA GL+ + + IK +A+ST++
Sbjct: 239 AG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVA 297
Query: 136 QLGYMTVGLGVSAYTVSIFHLMTHAFFKALLFLSAGSII 174
Q+G+M + G+ Y +++ HL+ H+ +KA FLSA +
Sbjct: 298 QMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
Score = 50.5 bits (121), Expect = 4e-06
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 373 AFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNL 432
A +K P+H WL +EAPT S +L A ++ LG + L+RF+ P+ A L
Sbjct: 209 AVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFA-PLLEQAPPARWLL 266
Query: 433 IITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV----TLGIFMLTKISIQGAIIQM 488
++ + L + + L+ + +I IK +A+S++A MGF+ LG++ L A++ +
Sbjct: 267 VL-VGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYEL-------ALLHL 318
Query: 489 ISHALISSAMFISIG 503
++H+L + F+S
Sbjct: 319 VAHSLYKAHAFLSAS 333
Score = 40.5 bits (95), Expect = 0.005
Identities = 48/207 (23%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 586 IIFVLGQM-IMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSG 644
+ VL + +++ ++LL + +SL L L+ + F+ AA K FI L+
Sbjct: 106 LAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAEL 165
Query: 645 FMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVP 704
+L ++ Y G+L L +++ + + S L + LL+++ + K P H W+
Sbjct: 166 LLLAAAALAYLEVGSLSLSALWAHLAAQGASPS-LQAAALLLVLAVILKTAQLPVHGWLI 224
Query: 705 DVYQGASIIITLLLSTTPKLSLFVIIYRLLIKC--LLPLVINWQKILLILAIFSLIIGNV 762
V + + + LL + L FV LI+ LL + +L+++ + + ++ +
Sbjct: 225 QVMEAPTPVSALLHAGVVNLGGFV-----LIRFAPLLEQAPPARWLLVLVGLATAVLAGL 279
Query: 763 SAITQYNFKRMIAYSSIAHMGLMLFSI 789
+T+ + K +A+S++A MG ML
Sbjct: 280 VMLTRISIKVRLAWSTVAQMGFMLLEC 306
>gnl|CDD|177142 MTH00070, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 346
Score = 106 bits (267), Expect = 1e-24
Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 38/312 (12%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG MI +S N+ ++GLE+ +L + L+ ++ ++ ++EAA KYF+ +S +L+
Sbjct: 15 LGTMITLSSNHWFLAWMGLEINTLAIIPLM-TKTHHPRATEAATKYFLTQASASALILFS 73
Query: 650 ISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG 709
+I TG + ++ L +++ + L KLGI+PFH W+P+V QG
Sbjct: 74 STINAWFTGEWTIMNMQT------------PLPTIMLTIALMMKLGIAPFHFWLPEVLQG 121
Query: 710 ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
+ L+LST KL+ ++ ++ L L+I+ + S +IG + Q
Sbjct: 122 LDLTTGLILSTWQKLAPMALLIQISHLLNSNL-------LIIMGLLSTLIGGWGGLNQTQ 174
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
++++AYSSIAH+G M I I T +L + N ++ Y+ F +++ L
Sbjct: 175 LRKIMAYSSIAHLGWM----IIILTFSPHLTLLN--------LLIYLIMTSSMFLMLMNL 222
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKI 889
+ NK +NP +MM+ + SL G PPT GF K+ I +++ +
Sbjct: 223 NSTNINKLSS------SWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLT 276
Query: 890 WLLLLIIMCSLI 901
L L+ + +L+
Sbjct: 277 TLATLMALSALL 288
Score = 54.5 bits (132), Expect = 1e-07
Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 35/267 (13%)
Query: 318 AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIK 377
AA K+FL S L+L S N + +I ++ I IA +K
Sbjct: 55 AATKYFLTQASASALILFSST---------INAWFTGEWTIMNMQTPLPTIMLTIALMMK 105
Query: 378 IPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLS 437
+ I P H WLP+ +IL+ KL LL + I + SNL+I +
Sbjct: 106 LGIAPFHFWLPEVLQGLDLTTGLILSTWQ-KLAPMALL---IQISHLLN---SNLLIIMG 158
Query: 438 LISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSA 497
L+S + + Q ++K++AYSSIAH+G++ I +LT S ++ ++ + +++S+
Sbjct: 159 LLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWM---IIILT-FSPHLTLLNLLIYLIMTSS 214
Query: 498 MFISIGFL----YNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMI 553
MF+ + L N++ + N P + ++ L+ LP T+GFI +++I
Sbjct: 215 MFLMLMNLNSTNINKLSSSWSKN--------PTLTSMMMLTLLSLGGLPPTTGFIPKWLI 266
Query: 554 ILSAVKFNFCIGVLTSTALIFSAAYSL 580
+ K N +T + SA SL
Sbjct: 267 LQELTKQNL---TTLATLMALSALLSL 290
Score = 48.0 bits (115), Expect = 2e-05
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
I M K P H WLP+ ++G + LI + A + ++ ++S L + ++
Sbjct: 100 IALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN-----LL 154
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS----AYTVSIFHLMTHA 160
+ +G ++ G G+ Q +++I+AYS+++ LG+M + L S + I+ +MT +
Sbjct: 155 IIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSS 214
Query: 161 FFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
F L+ L++ + I + + P ++ LLSL G P +GF K
Sbjct: 215 MFLMLMNLNSTN----------INKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPK 263
>gnl|CDD|214442 MTH00160, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 335
Score = 105 bits (264), Expect = 2e-24
Identities = 86/316 (27%), Positives = 152/316 (48%), Gaps = 47/316 (14%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
++G +I IS N+ ++GLE+ L+ LI+++KN SSE+++KYF++ L+S
Sbjct: 12 STLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNL-MSSESSLKYFLIQALASII 70
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
+L+ I + N++ NNI+ ++ SLLL KLG +PFH W P+
Sbjct: 71 LLFSIILNM-----------LNLMLFNNISSMLINSSLLL-------KLGAAPFHFWFPE 112
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
V +G S I +L T K++ +++ L+ ++I+ I S IIG + +
Sbjct: 113 VMEGLSWINCFILMTWQKIAPLILLSYLINN----------NFIIIIIILSAIIGAIGGL 162
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825
Q + ++++AYSSI H+G ML S++ + L Y + Y +
Sbjct: 163 NQTSLRKILAYSSINHLGWMLSSMMISEN------------LWLIYFLIYSIIS---LSI 207
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
I+L ++L + ++ + + SL G PP +GF K+ I + +
Sbjct: 208 ILLFNKFNIFFLNQLFNSNNK---SKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLIS 264
Query: 886 TQKIWLLLLIIMCSLI 901
+LL ++IM SLI
Sbjct: 265 NNMFFLLFILIMSSLI 280
Score = 45.6 bits (109), Expect = 1e-04
Identities = 53/294 (18%), Positives = 114/294 (38%), Gaps = 33/294 (11%)
Query: 269 YMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLM 328
+ L + + + ++ E L+ +I S +++K+FL +
Sbjct: 7 KLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQAL 66
Query: 329 GSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLP 388
S+++L S+I NI S + + +K+ P H W P
Sbjct: 67 ASIILLFSIILNMLNLMLFNNISS---------------MLINSSLLLKLGAAPFHFWFP 111
Query: 389 DAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIA 448
+ +E + + + K+ P+ + +N II + ++S I ++
Sbjct: 112 EV-MEGLSWINCFILMTWQKI---------APLILLSYLINNNFIIIIIILSAIIGAIGG 161
Query: 449 MVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQ 508
+ Q ++K++AYSSI H+G++ + + + + + LI S + +SI L+N+
Sbjct: 162 LNQTSLRKILAYSSINHLGWMLSSMMISENL--------WLIYFLIYSIISLSIILLFNK 213
Query: 509 MKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNF 562
++ N + L+ LP GF+ +++II + N
Sbjct: 214 FNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNM 267
Score = 35.2 bits (82), Expect = 0.17
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 48 MAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELS-NTALSIILF 106
+ K P H W P+ MEG + + I + +++PL LS + I+
Sbjct: 98 LLKLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLILLSYLINNNFIII 148
Query: 107 IGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALL 166
I ++A + G+ Q +++I+AYS+++ LG+M + +S I+ F +
Sbjct: 149 IIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIY------FLIYSI 202
Query: 167 FLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+ ++ N + + + + LLSL G P F GF K
Sbjct: 203 ISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPK 255
>gnl|CDD|235835 PRK06589, PRK06589, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 489
Score = 107 bits (269), Expect = 3e-24
Identities = 84/268 (31%), Positives = 131/268 (48%), Gaps = 50/268 (18%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLI-----------GFWYDKPLAITANL------------ 37
+S++LF +F+ +E++ +++ LI G+ Y K L I+A L
Sbjct: 134 LSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTK 193
Query: 38 -----------------KAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMV 80
L+ I +AK+A FP+H+WLP +M P SAL+HA +V
Sbjct: 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVV 253
Query: 81 TAGIFMITRMSP-LFELSN-----TALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTL 134
G+F I ++ +F LS + ++FI ++ F+ L + ++IK+I+AYST+
Sbjct: 254 KTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTI 313
Query: 135 SQLGYMTVG---LGVSAYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYK 191
SQL + L A +I HL++H+F K LF S GSI K +Q + + G K
Sbjct: 314 SQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQ-VDKLHGTSK 372
Query: 192 YMPITCITSLIGLLSLVGAPFFSGFYSK 219
P+ I LSL+G P FSGF SK
Sbjct: 373 SFPLISFIISISSLSLIGIPIFSGFISK 400
Score = 106 bits (267), Expect = 6e-24
Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 13/366 (3%)
Query: 224 IWIDYFNIYYFLGIDGLSLWFIPLTAFITLIIILISLD-IKKKLAEYMSAFLILSGLII- 281
+D+ N L ++ L L F+ L F+ + +L + + + S FL L I
Sbjct: 68 ELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTIL 127
Query: 282 -GAFCALDGMLF--YIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMI 338
G AL LF ++ +E I +IG + K+ ++ +LL+ + +
Sbjct: 128 IGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAV 187
Query: 339 YLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEG 398
L Y L + + Q + + FI K I+P+H+WLP A V
Sbjct: 188 ILIY---TKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
Query: 399 SVILAAIMLKLGCYGLLRFSLPIF----PDASYYFSNLIITLSLISIIYISLIAMVQIDI 454
+++ A I++K G + + + L IF + N +I + ++SI Y SL A+ +I
Sbjct: 245 ALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNI 304
Query: 455 KKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLI 514
KK++AYS+I+ + L F+LT ++ AI+ ++SH+ +F S+G +Y+ K +
Sbjct: 305 KKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQV 364
Query: 515 SNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSA-VKFNFCIGVLTSTALI 573
G P S I SL+ +P SGFI +F+I+L+A + + ++ +I
Sbjct: 365 DKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVI 424
Query: 574 FSAAYS 579
S+ S
Sbjct: 425 ASSILS 430
Score = 69.8 bits (171), Expect = 3e-12
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 30/327 (9%)
Query: 585 NIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYF-ILGILSS 643
N+ ++G +I +S + L ++++ EL++++ LI +NNI S KY IL I +
Sbjct: 123 NLTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNI-SLSGGYKYLKILMISAL 180
Query: 644 GFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWV 703
L + ++Y TG L+ S + ++ LLL+ + K I P H W+
Sbjct: 181 LLFLPAVILIYTKTGNLDFVS-------GGLFSKNQSIILLLMFIYGIAKTAIFPVHSWL 233
Query: 704 PDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCL----LPLVINWQKILLILAIFSLII 759
P + LL + + IY++L+ L + L+ + I S+
Sbjct: 234 PAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFY 293
Query: 760 GNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAI 819
++ A+ N K+++AYS+I+ + L L S ++ + + + +++++ FA
Sbjct: 294 SSLKALKTDNIKKILAYSTISQLSLALLSAF--------ILTPKALGAAILHLVSHSFAK 345
Query: 820 LGAF---GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAK 876
+ F G I LK K D++D G + P + I+ I SL G P GF +K
Sbjct: 346 ICLFYSMGSIYSLK-----KEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISK 400
Query: 877 FFIFEKIFETQKIWLLLLIIMCSLIGA 903
F I E + WL +++++ + +
Sbjct: 401 FLILLAASEQNQPWLSIIVMLVVIASS 427
>gnl|CDD|235978 PRK07234, PRK07234, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 470
Score = 105 bits (265), Expect = 1e-23
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 34 TANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPL 93
TA+ +AF + +G + K F WLP + P + + + +V AG+F + R +
Sbjct: 181 TADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA-- 238
Query: 94 FELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSI 153
I+ G TA L +++ D+KR++A+ST+SQLG++ ++A V
Sbjct: 239 -LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI-----LAAPLVGG 292
Query: 154 FHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFF 213
+ + H K+ LFL AG + + + I M G+ K++P+T + S+ G P
Sbjct: 293 LYALAHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLL 346
Query: 214 SGFYSKD 220
+GF SK
Sbjct: 347 AGFVSKV 353
Score = 103 bits (260), Expect = 4e-23
Identities = 76/315 (24%), Positives = 141/315 (44%), Gaps = 30/315 (9%)
Query: 235 LGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFL-ILSGLIIGAFCALDGMLFY 293
L D LS +FI A +TL +I + + A L IL G + AF D + Y
Sbjct: 63 LRADALSGYFILTNALVTLAVIFYC--WESAKTRFFYAQLLILHGSVNAAFVCADLISLY 120
Query: 294 IFFEATLIPIFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILS 352
+ E I F+++ + ++R+ +++ Y+ + L LI + L Y +N +F
Sbjct: 121 VALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAV-LVYQANGTFAFSG 178
Query: 353 WHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCY 412
L+ E L + +K I+ WLP H EA S +L+ +++K G +
Sbjct: 179 ---LATADPEAFALI---ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVF 232
Query: 413 GLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLG 472
L+R +L + ++ + + + L A+++ D+K+++A+S+I+ +GF+
Sbjct: 233 PLVRCALDVPGLDL-----IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA 287
Query: 473 IFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532
+ + ++H L+ S +F+ G L ++ T LIS GI IP
Sbjct: 288 PLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP-----LT 334
Query: 533 IFSLANCSLPGTSGF 547
+ S + P +GF
Sbjct: 335 MASFSIAGFPLLAGF 349
Score = 78.5 bits (194), Expect = 7e-15
Identities = 85/423 (20%), Positives = 160/423 (37%), Gaps = 69/423 (16%)
Query: 486 IQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTS 545
+ ++ I+ + R ++ I++ + ++ S+ L
Sbjct: 1 MTSLTPVWIALPFLLGFAIYLLPKLDRNLALGMAIVSAV---YALGLVASMVPLELTLLD 57
Query: 546 GF--------IGEFMIILSAVKFNFCIGVL------TSTALIFSAAYSLCLSKNIIFVLG 591
F + + I+ +A+ + V+ T ++ L S N FV
Sbjct: 58 NFGVTLRADALSGYFILTNALVT---LAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCA 114
Query: 592 QMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGIS 651
+L+S+Y+ LE++S+ +L+A + + + ++Y ++ F L G
Sbjct: 115 --------DLISLYVALEVLSIATFLLVAYPRTDR-AIWVGLRYLFYSNVAMLFYLIGAV 165
Query: 652 ILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGAS 711
++Y GT L + AL I +GL K GI +W+P + A
Sbjct: 166 LVYQANGTFAFSG------LATADPEAFAL----IALGLLVKGGIFVSGLWLPLTHSEAE 215
Query: 712 IIITLLLS-TTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNF 770
++ LLS K +F L++C L V I+ I + + ++G + A+ + +
Sbjct: 216 PPVSALLSGVVVKAGVFP-----LVRCAL-DVPGLDLIVRIFGVGTALLGVLFALLEKDL 269
Query: 771 KRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLK 830
KRM+A+S+I+ +G +L + + G Y + + F L
Sbjct: 270 KRMLAFSTISQLGFILAAPL----------------VGGLYALAHGLVKSTLF----LCA 309
Query: 831 NNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIW 890
++ I L W L M FS+AGFP GF +K + + Q I
Sbjct: 310 GALPSRNFTELISQML-GIGKWIPLTMA--SFSIAGFPLLAGFVSKVLTLKNLLPWQAIA 366
Query: 891 LLL 893
L L
Sbjct: 367 LNL 369
>gnl|CDD|164587 MTH00011, ND2, NADH dehydrogenase subunit 2; Validated.
Length = 330
Score = 102 bits (256), Expect = 2e-23
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 44/313 (14%)
Query: 589 VLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLY 648
LG ++ +S NN L +++G+EL L+ L+ S K N SEAA+KYF+ L SG +L
Sbjct: 16 TLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQ-ESEAAVKYFLAQALGSGLLLL 74
Query: 649 GISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQ 708
G+++++ S +++K NI +L +SL+L KLG++P H W P V
Sbjct: 75 GMTMMW---------SFPSLLK--NITALMLLVSLML-------KLGMAPCHFWFPSVMS 116
Query: 709 GASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQY 768
S + L+LST K++ I++ +LP++ +A S + G + + Q
Sbjct: 117 SISWTLCLILSTWQKIAPLSILFFFTSHNILPMM-------TSMAAMSALAGGLGGMNQT 169
Query: 769 NFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIIL 828
+ ++AYSSI HMG M + S + Y +TYI ++
Sbjct: 170 QLRPLLAYSSIGHMGWMTMISVF------------SPSMAILYFMTYIIITTPLM--LLF 215
Query: 829 LKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQK 888
N + + + ++ + I + SL G PP GF K E +
Sbjct: 216 AYLNAFSTKFN----SKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSM 271
Query: 889 IWLLLLIIMCSLI 901
I +LL++I+ SL+
Sbjct: 272 ILILLVLIVGSLM 284
Score = 64.8 bits (158), Expect = 7e-11
Identities = 69/321 (21%), Positives = 144/321 (44%), Gaps = 36/321 (11%)
Query: 271 SAFLILSGLIIGAFCALDG---MLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTL 327
+ FL S + +G AL + ++ E L+ ++ + + S AA+K+FL
Sbjct: 7 TMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQA 66
Query: 328 MGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWL 387
+GS L+L+ M ++ + NI + + ++ +K+ + P H W
Sbjct: 67 LGSGLLLLGMTMMWSFPSLLKNITA---------------LMLLVSLMLKLGMAPCHFWF 111
Query: 388 PDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLI 447
P + + + + ++ + K+ +L F ++ +++ +S + L
Sbjct: 112 P-SVMSSISWTLCLILSTWQKIAPLSILFFFTSHNI------LPMMTSMAAMSALAGGLG 164
Query: 448 AMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYN 507
M Q ++ L+AYSSI HMG++T M++ S AI+ +++ +I++ + + +L N
Sbjct: 165 GMNQTQLRPLLAYSSIGHMGWMT----MISVFSPSMAILYFMTYIIITTPLMLLFAYL-N 219
Query: 508 QMKTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVL 567
T+ S ++ S+F ++ SL LP +GF+ + M I + + + +L
Sbjct: 220 AFSTKFNSKISS-MSQTTSMSLFIMLLSLG--GLPPFTGFMPKLMAIETLTSNSMILILL 276
Query: 568 TSTALIFSAAYSLCLSKNIIF 588
LI + +L N+IF
Sbjct: 277 V---LIVGSLMNLFYYLNLIF 294
Score = 58.6 bits (142), Expect = 6e-09
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 48 MAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFI 107
M K P H W P M + LI + A + ++ F S+ L ++ +
Sbjct: 99 MLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSIL-----FFFTSHNILPMMTSM 153
Query: 108 GAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFFKALLF 167
A++A GL G+ Q ++ ++AYS++ +G+MT+ + V + +++I + MT+ L
Sbjct: 154 AAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLM 212
Query: 168 LSAGSI-IINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
L + + K N I +M T ++ I LLSL G P F+GF K
Sbjct: 213 LLFAYLNAFSTKFNSKISSMS------QTTSMSLFIMLLSLGGLPPFTGFMPK 259
>gnl|CDD|214413 MTH00062, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 417
Score = 100 bits (252), Expect = 2e-22
Identities = 89/335 (26%), Positives = 156/335 (46%), Gaps = 23/335 (6%)
Query: 237 IDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILS-GLIIGAFCALDGMLFYIF 295
D LS + I L F+ L ++ ++ L+ FL LS I FC + +LF+ F
Sbjct: 43 FDSLSFYLILLVLFLGLYSQVMFYNL---LSGVSRFFLFLSLIFSILCFCVNNSLLFWFF 99
Query: 296 FEATLIP-IFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWH 354
+E ++IP ++++ S R A+ F Y L+ SL +L+ ++YL ++ SFN W
Sbjct: 100 YELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNG-SFNFSDW- 157
Query: 355 QLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGL 414
+ ++ F K+P++P HTWLP H EA + S+ L+ ++KLG G+
Sbjct: 158 --GSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGV 215
Query: 415 LRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIF 474
RF IF + + L S+ +I A ++D K+ +A+ S++H+ LG+F
Sbjct: 216 YRFCGFIFSGSFLGYLFLCCLFSVFFLIT----ACSELDGKRWLAFLSLSHILVPVLGLF 271
Query: 475 MLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTR----LISNFGGIINVIPHFSVF 530
+ SI + + H L + +F+ + Y +R L S G + +
Sbjct: 272 VGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLR-----V 326
Query: 531 FIIFSLAN-CSLPGTSGFIGEFMIILSAVKFNFCI 564
++FS + CS P T F E ++ S+ +
Sbjct: 327 IVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYL 361
Score = 43.8 bits (104), Expect = 4e-04
Identities = 52/254 (20%), Positives = 110/254 (43%), Gaps = 36/254 (14%)
Query: 635 YFILGILSSGF-MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFK 693
YF+ +L + +L + L + G+ FN + + L + +L + ++ K
Sbjct: 126 YFLGYLLLTSLPLLLCLLYLSLVNGS------FNFSDWGSDDSVSLIVYYVLSFMFIT-K 178
Query: 694 LGISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKILLIL 752
+ + PFH W+P V+ AS +++ LS KL L + +YR + L +
Sbjct: 179 VPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGL-LGVYRF-CGFIFSGSFLG--YLFLC 234
Query: 753 AIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSC------D 806
+FS+ ++A ++ + KR +A+ S++H+ L+ + + + + F C
Sbjct: 235 CLFSVFF-LITACSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYCLGHGLSA 292
Query: 807 SGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAG 866
+F ++ + + G+ ++L + + L +I++ SL
Sbjct: 293 GLVFLLLWCFYEVSGSRNWVLLKSGINGS--------LVLR-------VIVVFSFLSLCS 337
Query: 867 FPPTIGFYAKFFIF 880
FPPTI F+ + F+
Sbjct: 338 FPPTIQFFCEVFLV 351
>gnl|CDD|236310 PRK08601, PRK08601, NADH dehydrogenase subunit 5; Validated.
Length = 509
Score = 102 bits (255), Expect = 3e-22
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 47 AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILF 106
M +AQ+P WL +S PTP SA++HA +V AG M+TR SPLF + I+L
Sbjct: 214 VMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF--HDDIAQILLL 270
Query: 107 IGAITAFFMGLLG----IIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFF 162
I A L+G ++Q D KR + ST++Q+G+M V + AY+ +I HL+ H F
Sbjct: 271 I---FASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLF 327
Query: 163 KALLFLSAGSII 174
KA LFL +GS +
Sbjct: 328 KATLFLQSGSAV 339
Score = 52.3 bits (126), Expect = 1e-06
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 17/142 (11%)
Query: 368 ITFFIAFAIKIPI--WPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDA 425
I + A+ IP WP WL ++ V APT S I+ A ++ G L RFS P+F D
Sbjct: 206 INLLLILAVMIPAAQWPFQRWLIESAV-APTPVSAIMHAGLVNAGGIMLTRFS-PLFHDD 263
Query: 426 SYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFV----TLGIFMLTKISI 481
L++ + IS++ + I++VQ+D K+ + S++A MGF+ LG +
Sbjct: 264 --IAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYS------ 315
Query: 482 QGAIIQMISHALISSAMFISIG 503
AII +I H L + +F+ G
Sbjct: 316 -AAIIHLILHGLFKATLFLQSG 336
Score = 38.9 bits (91), Expect = 0.016
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 601 LLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTL 660
L+++ G L+ LTL LI K + EAA +L ++S + I L+ TG
Sbjct: 127 LMALCWGATLLGLTL--LIGLNKGWKVAREAAKISGMLFLISWLALALAIVWLFIATGEW 184
Query: 661 ELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLST 720
+L S+ + L + LL+I+ + PF W +I ++
Sbjct: 185 QLTSVLSNENLAQLGTWEKTGINLLLILAVMIPAAQWPFQRW----------LIESAVAP 234
Query: 721 TPKLSL----FVIIYRLLIKCLLPLVIN--WQKILLILAIFSLIIGNVSAITQYNFKRMI 774
TP ++ V +++ PL + Q +LLI A S++IG ++ Q ++KR +
Sbjct: 235 TPVSAIMHAGLVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLVQVDYKRQL 294
Query: 775 AYSSIAHMGLML 786
S++A MG ML
Sbjct: 295 VGSTMAQMGFML 306
>gnl|CDD|238816 cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS)
3'-phosphatase, is a bacterial member of the inositol
monophosphatase family. It has been proposed that CysQ
helps control intracellular levels of PAPS, which is an
intermediate in cysteine biosynthesis (a principal route
of sulfur assimilation).
Length = 242
Score = 94.6 bits (236), Expect = 2e-21
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 22/211 (10%)
Query: 963 ASEKIITKILFNTYPSYAFL------IKKSNYLTNFENENIWIIDPLDNITNFSHNFPQY 1016
A+ I + L P L + W++DPLD F ++
Sbjct: 41 AANAFIVEGLAALRPDIPVLSEESADDPLR-----LGWDRFWLVDPLDGTREFIKGNGEF 95
Query: 1017 CISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTD-FS 1075
++IAL + + V+Y P +L+ A++G GAY N + V+ + + S
Sbjct: 96 AVNIALVEDGRPVLGVVYAPALGELYYALRGGGAYKNGRPGAVSLQARPPPLQPLRVVAS 155
Query: 1076 FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKP-WNIAAGSL 1134
+ EE + + + + +IG SSL VA G+ D + G W+ AAG
Sbjct: 156 R--SHPDEELEALLAALGVAE-VVSIG-SSLKFCLVAEGEADIYPRLGPTMEWDTAAGDA 211
Query: 1135 LIIESGGIISNFKGE-----KNYLYTGDIVA 1160
++ +GG +S+ G + D +A
Sbjct: 212 VLRAAGGAVSDLDGSPLTYNREDFLNPDFIA 242
>gnl|CDD|213680 TIGR02067, his_9_HisN, histidinol-phosphatase, inositol
monophosphatase family. This subfamily belongs to the
inositol monophosphatase family (pfam00459). The members
of this family consist of no more than one per species
and are found only in species in which histidine is
synthesized de novo but no histidinol phosphatase can be
found in either of the two described families (TIGR01261,
TIGR01856). In at least one species, the member of this
family is found near known histidine biosynthesis genes.
The role as histidinol-phosphatase wsa first proven in
Corynebacterium glutamicum [Amino acid biosynthesis,
Histidine family].
Length = 251
Score = 88.1 bits (219), Expect = 3e-19
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 925 AIKAARKSALIIN---RGSLELENLRFEEKKYENFVFNI-NKASEKIITKILFNTYPSYA 980
A A + I R SL + + KK + ++A+E+ + +++ +P +
Sbjct: 5 AEDLADAAGETILPFFRASLLVVD-----KKSDKTPVTEADRAAEEAMRELIAAFFPDHG 59
Query: 981 FLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRND 1040
L ++ + + E +W++DP+D +F P + IAL + VI+ P +
Sbjct: 60 ILGEEFGHNEEGDAERVWVLDPIDGTKSFIRGVPVWGTLIALVEGGMPVLGVIFQPATGE 119
Query: 1041 LFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRN 1100
+ A G A+L +R+RV+ ++DA++ T + ++ E F+ + + L
Sbjct: 120 RWWAAGGGAAFLGGRRLRVSSCANLSDAVLFT--TSPYLLDDPENRPAFERLRRAARLTR 177
Query: 1101 IGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLLIIESGGIISNFKGEKNYLYTGDIVA 1160
G VA G +D E GL PW+IAA +I E+GG +++ G K G VA
Sbjct: 178 YGGDCYAYLMVAGGAVDIVVEPGLSPWDIAALIPVIEEAGGCFTDWDG-KPAPDGGGAVA 236
Query: 1161 -GNQKIFSQIISLIN 1174
GN + + + ++N
Sbjct: 237 AGNAMLHDEALEILN 251
>gnl|CDD|181206 PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed.
Length = 593
Score = 92.6 bits (230), Expect = 4e-19
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 26/182 (14%)
Query: 55 PLHTWLPDSMEG-PTPASALIHAATMVTAGIFMITRMSPLFELSNTALSI-----ILFIG 108
PLH W+P + PA+AL M + ++T L + +L +G
Sbjct: 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILT-----LSLLGGNAPLWWGVALLVLG 252
Query: 109 AITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVS--------------IF 154
ITAF GL +++++I+R++AY TL +G + +GLG ++ ++
Sbjct: 253 MITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLY 312
Query: 155 HLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFS 214
HL+ H+ FK++LFL AGS+ H +DI +GG+ K MP+ I L+GL+++ P +
Sbjct: 313 HLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLN 371
Query: 215 GF 216
GF
Sbjct: 372 GF 373
Score = 84.1 bits (208), Expect = 2e-16
Identities = 54/201 (26%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 364 IWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP 423
IWL I F + I P+H W+P AH A + + + +++K+G G+L SL +
Sbjct: 182 IWLL--GVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-LGG 238
Query: 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFM-LTKISIQ 482
+A ++ ++ L +I+ L A+++ +I++L+AY ++ ++G + LG+ +T I+++
Sbjct: 239 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALE 298
Query: 483 ----------GAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532
G + +++H+L S +F+ G ++ + R I GGI +P S+ +
Sbjct: 299 QPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
Query: 533 IFSLANCSLPGTSGFIGEFMI 553
+ +A +LP +GF GE++I
Sbjct: 359 VGLMAMAALPPLNGFAGEWVI 379
Score = 63.7 bits (155), Expect = 3e-10
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 26/262 (9%)
Query: 635 YFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKL 694
+F LG L + + +L+ GTL+L+ + ++ + + LL ++G
Sbjct: 139 WFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLG----SDIWLLGVIGFGLLA 194
Query: 695 GISPFHMWVPDVYQGASIIITLLLSTTP-KLSLFVIIYRLLIKCLLPLVINWQKILLILA 753
GI P H WVP + AS L ST K+ L I+ L+ PL W LL+L
Sbjct: 195 GIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLW--WGVALLVLG 252
Query: 754 IFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFS----IISIKTSHNNLIIFNSCDSGL 809
+ + +G + A+ ++N +R++AY ++ ++G++L + I LI GL
Sbjct: 253 MITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLV-GGL 311
Query: 810 FYIITY-IFA---ILGAFGVIILLKNNTCNKTDELDI--FIGLHQRNPWCALIMMIFMFS 863
++++ + +F LGA V +T DI G+ ++ P ++ M++ + +
Sbjct: 312 YHLLNHSLFKSVLFLGAGSVWF--------RTGHRDIEKLGGIGKKMPVISIAMLVGLMA 363
Query: 864 LAGFPPTIGFYAKFFIFEKIFE 885
+A PP GF ++ I++ F+
Sbjct: 364 MAALPPLNGFAGEWVIYQSFFK 385
>gnl|CDD|235767 PRK06277, PRK06277, hydrogenase subunit F; Validated.
Length = 478
Score = 90.5 bits (225), Expect = 1e-18
Identities = 81/309 (26%), Positives = 156/309 (50%), Gaps = 25/309 (8%)
Query: 599 NNLLSIYLGLELMSLT-LCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGIT 657
+++ ++Y+ E+ ++ + ++IAS + +AA+KY ILG ++ +L GI L T
Sbjct: 120 DDIFNLYVFFEIAAIVQVGLVIASGTEE--AYKAALKYMILGNVAGSILLLGIGFLLAST 177
Query: 658 GTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLL 717
GTL + I N + L N V+ LLL+I GL + G+ PFH D+Y A + L
Sbjct: 178 GTLNITDIHNAL-LVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSAL 236
Query: 718 LSTTPK---LSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMI 774
L T K ++L ++I++L L + Q +L+ L++ +++ G V A+ Q ++KR++
Sbjct: 237 LQTFSKFVLVALMLVIFKLFGG--LSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLL 294
Query: 775 AYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIF---AILGAFGVIILLKN 831
AY +I+ G + +++ T +G+F+ I ++ A+ G++
Sbjct: 295 AYHAISQGGYVAAG-LALGTPL-------GIVAGIFHAINHVIYKSALFLGAGIV----- 341
Query: 832 NTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWL 891
+ KT L GL P A +++ +++G PP GF +K + + + L
Sbjct: 342 SYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPEL 401
Query: 892 LLLIIMCSL 900
+++I+ S+
Sbjct: 402 AIIMIIVSI 410
Score = 81.2 bits (201), Expect = 9e-16
Identities = 76/330 (23%), Positives = 153/330 (46%), Gaps = 19/330 (5%)
Query: 244 FIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFE-ATLIP 302
I + + I ++++ L KK Y+ L+ + A D Y+FFE A ++
Sbjct: 77 IIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQ 136
Query: 303 IFIIIGTWGGSNRSY-AAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKI 361
+ ++I + G+ +Y AA+K+ + + ++L+ + +L + + NI H +
Sbjct: 137 VGLVIAS--GTEEAYKAALKYMILGNVAGSILLLGIGFLLASTG-TLNITDIHNALLVNP 193
Query: 362 EQIWLFITFFIAFAIKIPIW-------PMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGL 414
+ + I P HT D + +A GS +L K L
Sbjct: 194 TSP----VIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFS-KFVLVAL 248
Query: 415 LRFSLPIFPDASYY--FSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLG 472
+ +F SY+ ++I LS++++++ ++A++Q D K+L+AY +I+ G+V G
Sbjct: 249 MLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAG 308
Query: 473 IFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFI 532
+ + T + I I I+H + SA+F+ G + + KT + GG++ V+P + +
Sbjct: 309 LALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVL 368
Query: 533 IFSLANCSLPGTSGFIGEFMIILSAVKFNF 562
LA +P +GF + M+ +A++ N
Sbjct: 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANM 398
Score = 73.1 bits (180), Expect = 3e-13
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 78 TMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFFMGL-LGIIQNDIKRIIAYSTLSQ 136
+V + + L + +I ++ A G+ + ++Q D KR++AY +SQ
Sbjct: 244 VLVALMLVIFKLFGGLSYFPSAQGVLIAL--SVLAMVFGVVMALLQTDYKRLLAYHAISQ 301
Query: 137 LGYMTVGLGVS---AYTVSIFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYM 193
GY+ GL + IFH + H +K+ LFL AG I+ ++R +GGL M
Sbjct: 302 GGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVM 360
Query: 194 PITCITSLIGLLSLVGAPFFSGFYSK 219
P+ L L++ G P F+GF SK
Sbjct: 361 PVVAFMVLCAKLAISGVPPFNGFQSK 386
>gnl|CDD|177244 MTH00197, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 323
Score = 85.9 bits (213), Expect = 7e-18
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 47/316 (14%)
Query: 586 IIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGF 645
I G + +S +N +++G+E ++L + + SQ +I +E A+KYF+ S
Sbjct: 5 FIIFGGVLFSLSSSNWFLVWIGME-LNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSAL 63
Query: 646 MLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPD 705
+L G S+ + N + LS++L+I+GL KLG PFH WVP
Sbjct: 64 LLMGGSLSF-------------------SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPS 104
Query: 706 VYQGASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
V + S LL+T KL+ +I L + LLI ++ S +IG + +
Sbjct: 105 VMESLSWFNCFLLATWQKLAPLLI---------LAFNSSSFMGLLICSVLSSLIGGIGGM 155
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGV 825
Q N ++++AYSSI H G ML S++ S + Y + Y + F
Sbjct: 156 NQSNIRQLLAYSSIGHTGWMLMSLVY------------SPSIFMLYYLIYFVIMFMLFLF 203
Query: 826 IILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFE 885
+ ++ N+ + + + + SL G PP GF+ K+ I +
Sbjct: 204 LSKNNLSSLNQQYSNPESMSSNLVF------LGLSFLSLGGLPPLSGFFLKWLILTSLLS 257
Query: 886 TQKIWLLLLIIMCSLI 901
+ + ++I+ +
Sbjct: 258 SNISLITFMLILSTCF 273
Score = 49.3 bits (118), Expect = 7e-06
Identities = 68/349 (19%), Positives = 132/349 (37%), Gaps = 41/349 (11%)
Query: 273 FLILSGLIIGAFCALDG---MLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMG 329
FL L + G +L L +I E LI ++ + A+K+FL+ G
Sbjct: 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFG 60
Query: 330 SLLMLISMIYLYYISNKSFNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMHTWLPD 389
S L+L+ + + + + +K+ +P H W+P
Sbjct: 61 SALLLMGGSLSFS-NLYLSLLSVV---------------LVILGLLLKLGAFPFHFWVPS 104
Query: 390 AHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAM 449
+E+ + + L A KL +L F+ ++ S++S + + M
Sbjct: 105 V-MESLSWFNCFLLATWQKLAPLLILAFN--------SSSFMGLLICSVLSSLIGGIGGM 155
Query: 450 VQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQM 509
Q +I++L+AYSSI H G++ + + I + + LI + + ++
Sbjct: 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSI--------FMLYYLIYFVIMFMLFLFLSKN 207
Query: 510 KTRLISNFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFN-FCIGVLT 568
++ + VF + L+ LP SGF +++I+ S + N I +
Sbjct: 208 NLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFML 267
Query: 569 STALIFSAAYSLCLSKNIIFVLGQMI----MISGNNLLSIYLGLELMSL 613
+ FS Y L L+ + + MI I+ L + ++ L
Sbjct: 268 ILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILLMMMLPL 316
Score = 39.3 bits (92), Expect = 0.008
Identities = 39/177 (22%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELS-NTALSI 103
+G + K FP H W+P ME + + + + +++PL L+ N++ +
Sbjct: 87 LGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFM 137
Query: 104 ILFIGAITAFFMG-LLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVSIFHLMTHAFF 162
L I ++ + +G + G+ Q++I++++AYS++ G+M + L V + ++ + + + +
Sbjct: 138 GLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSL-VYSPSIFMLYYLIYFVI 196
Query: 163 KALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
+LFL ++ + + + M + + LSL G P SGF+ K
Sbjct: 197 MFMLFL-----FLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLK 248
>gnl|CDD|238819 cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of
Mg++ dependend phosphatases, related to inositol
monophosphatases. These enzymes may dephosphorylate
fructose-1,6-bisphosphate, inositol monophospate,
3'-phosphoadenosine-5'-phosphate, or similar substrates.
Length = 248
Score = 82.7 bits (205), Expect = 3e-17
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 962 KASEKIITKILFNTYPSYAFLIKKSNYLTNFENEN-----IWIIDPLDNITNFSHNFPQY 1016
+A+E + +++ +P + L ++ F NE +W++DP+D +F P +
Sbjct: 40 RAAEAAMRELIAAAFPDHGILGEE------FGNEGGDAGYVWVLDPIDGTKSFIRGLPVW 93
Query: 1017 CISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLN---EKRIRVNKRNKINDALI-GT 1072
IAL + VI P + + +G G +LN + +RV + +A++ T
Sbjct: 94 GTLIALLHDGRPVLGVIDQPALGERWIGARGGGTFLNGAGGRPLRVRACADLAEAVLSTT 153
Query: 1073 DFSFKNNINSEEYAKIFQIITK-CKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAA 1131
D F + F+ + + + R G A VASG++D E GLKP+++AA
Sbjct: 154 DPHF----FTPGDRAAFERLARAVRLTR-YGGDCYAYALVASGRVDLVVEAGLKPYDVAA 208
Query: 1132 GSLLIIESGGIISNFKGEKNYLYTGDIVAGNQK 1164
+I +GG+I+++ G +G +VA
Sbjct: 209 LIPIIEGAGGVITDWDGGPLTGGSGRVVAAGDA 241
>gnl|CDD|177193 MTH00135, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 347
Score = 81.8 bits (203), Expect = 2e-16
Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 39/290 (13%)
Query: 590 LGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYG 649
LG + + ++ L ++GLE+ +L + L+A Q ++ + EA KYF+ ++ +L+
Sbjct: 15 LGTTLTFASSHWLLAWMGLEINTLAIIPLMA-QHHHPRAVEATTKYFLTQATAAAMILFA 73
Query: 650 ISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQG 709
+ +TG ++Q + + L +I + L+ K+G++P H W+P+V QG
Sbjct: 74 STTNAWLTGQWDIQQMSH------------PLPTTMITLALALKIGLAPLHFWLPEVLQG 121
Query: 710 ASIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYN 769
+ L+LST KL+ F +I + + +L+ L + S ++G + Q
Sbjct: 122 LDLTTGLILSTWQKLAPFALILQ--------IAPTNPTLLITLGLTSTLVGGWGGLNQTQ 173
Query: 770 FKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILL 829
++++AYSSIAH+G M I+ ++ S +L + ++TYI AF +
Sbjct: 174 LRKILAYSSIAHLGWM---ILVLQFS-PSLTLLA--------LLTYIIMTSSAF---LTF 218
Query: 830 KNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFI 879
K N+ K + L + P + + + SL G PP GF K+ I
Sbjct: 219 KLNSSTKINTLAT---SWTKAPALTALTPLILLSLGGLPPLTGFMPKWLI 265
Score = 43.6 bits (104), Expect = 4e-04
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 55 PLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSIILFIGAITAFF 114
PLH WLP+ ++G + LI + A +I +++P +N L I L G +
Sbjct: 110 PLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP----TNPTLLITL--GLTSTLV 163
Query: 115 MGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS----AYTVSIFHLMTHAFFKALLFLSA 170
G G+ Q +++I+AYS+++ LG+M + L S + + +MT + F S+
Sbjct: 164 GGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSS 223
Query: 171 GSIIINMKHNQDIRNMGGLY--KYMPITCITSLIGLLSLVGAPFFSGFYSK 219
I N K +T +T LI LLSL G P +GF K
Sbjct: 224 TKI-----------NTLATSWTKAPALTALTPLI-LLSLGGLPPLTGFMPK 262
Score = 43.3 bits (103), Expect = 6e-04
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 372 IAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIML----KLGCYGLLRFSLPIFPDASY 427
+A A+KI + P+H WLP+ +G + ++L KL + L+ L I P
Sbjct: 100 LALALKIGLAPLHFWLPEV-----LQGLDLTTGLILSTWQKLAPFALI---LQIAPTNP- 150
Query: 428 YFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTL 471
L+ITL L S + + Q ++K++AYSSIAH+G++ L
Sbjct: 151 ---TLLITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMIL 191
>gnl|CDD|214414 MTH00063, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 522
Score = 79.5 bits (197), Expect = 4e-15
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 34/249 (13%)
Query: 1 MSNNLFQLFLGWEIVGMASYLLIGFWYDKPLAITANLKAFLINRIG-------------- 46
++ + + WE +G+ S+ LI F YD L++ A++ + +R G
Sbjct: 94 LTGDFLSTLIFWEYLGVVSFFLILF-YDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWG 152
Query: 47 --------------AMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSP 92
KSA FP +WL ++M PTP S+L+H++T+V AG++ + R
Sbjct: 153 GSGSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDY 212
Query: 93 LFELSNTALSIILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVSAYTVS 152
L S + +T F G+ + +D+K+I+A ST + + + + L +S
Sbjct: 213 LLGFSW-LSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILS 271
Query: 153 IFHLMTHAFFKALLFLSAGSIIINMKHNQDIRNM--GGLYKYMPITCITSLIGLLSLVGA 210
+F L++H K LLF+ G ++ +Q + LY + + L+ L L G
Sbjct: 272 LFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGV 329
Query: 211 PFFSGFYSK 219
PF F+SK
Sbjct: 330 PFIGVFFSK 338
Score = 34.9 bits (81), Expect = 0.28
Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 364 IWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPT------EGSVILAAIMLKLGCYGLLRF 417
+ F I F K +P +WL +A + APT S ++AA G + ++R+
Sbjct: 158 LCCLFFFLIVFT-KSASFPFISWLLEA-MRAPTPVSSLVHSSTLVAA-----GVWFVMRY 210
Query: 418 SLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLT 477
+ F L L++I + ++ D+KK++A S+ ++ + + L
Sbjct: 211 DYLLGFSWLSIF---FSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWC---VLYLI 264
Query: 478 KISIQGAIIQMISHALISSAMFISIGFLYN-----QMKTRLISN-FGGIINVIPHFSVFF 531
+ ++ Q++SH + +F+ +G + + Q + S+ G N+ F +F
Sbjct: 265 YGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNL---FYLFL 321
Query: 532 IIFSLANCSLPGTSGFIGEF------MIILSAVKFNFCIGVLTSTALIFSAAYS--LCL 582
++ L +P FIG F + S+V FN + ++ + S YS LCL
Sbjct: 322 LVLGL--SGVP----FIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCL 374
>gnl|CDD|224139 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS)
3'-phosphatase [Inorganic ion transport and metabolism].
Length = 276
Score = 75.8 bits (187), Expect = 8e-15
Identities = 52/236 (22%), Positives = 90/236 (38%), Gaps = 19/236 (8%)
Query: 925 AIKAARKSALIINRGSLELENLRFEEKKYENFVFNINKASEKIITKILFNTYPSYAFLIK 984
KAA ++ I E + L K + V + A+++II + L +P + +
Sbjct: 12 VEKAALEAGQAILEVYKE-KGLAVWTKADNSPVTAADLAAQQIILEGLRALFPDIPVVSE 70
Query: 985 KSNYLTNFENEN---IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDL 1041
+ + E + W++DPLD F + ++IAL + V+Y P L
Sbjct: 71 EEEAIDWEERLHWDRFWLVDPLDGTKEFIKRNGDFAVNIALIENGVPVLGVVYAPETGKL 130
Query: 1042 FTAIKGCGAYLN-------EKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITK 1094
+ A G GA K+I + R L+ S + +
Sbjct: 131 YYAAAGGGAKREQSDNEGLRKKIPIRVRTPPKSLLVVASRS-----HRSPETEELLAQLG 185
Query: 1095 CKNLRNIGTSSLNLAYVASGKLDGF--FEKGLKPWNIAAGSLLIIESGGIISNFKG 1148
+IG+S L VA G D + F W+ AAG ++ +GG +++ G
Sbjct: 186 FIQTVSIGSSGLKFCLVAEGAADIYPRFG-PTMEWDTAAGHAVLEAAGGHVTDLDG 240
>gnl|CDD|237601 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional.
Length = 569
Score = 75.9 bits (187), Expect = 6e-14
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 50/239 (20%)
Query: 964 SEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIALK 1023
SE+I K + P Y I+++DP+D N + P Y SIA+
Sbjct: 67 SEEIGFKKIGKNKPEY-----------------IFVLDPIDGTYNALKDIPIYSASIAIA 109
Query: 1024 QKKQITHSVIYDPIRN-----------------DLFTAIKGCGAYL----NEKRIRVNKR 1062
+ + +N D + A KG GAYL +K+I ++
Sbjct: 110 KIDGFDKKIKEFIGKNLTINDLEVGVVKNIATGDTYYAEKGEGAYLLKKGEKKKIEISNI 169
Query: 1063 NKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFE- 1121
+ + DA IG F++ ++++ ++ K K + +R G+ +L + YVASG LD F
Sbjct: 170 SNLKDASIGL-FAYGLSLDTLKFIKD----RKVRRIRLFGSIALEMCYVASGALDAFINV 224
Query: 1122 -KGLKPWNIAAGSLLIIESGGIISNFKGEK-----NYLYTGDIVAGNQKIFSQIISLIN 1174
+ + +IAAG ++ E+GGII+N G+ + ++ N+ + +++ +
Sbjct: 225 NETTRLCDIAAGYVICKEAGGIITNKNGKPLNMKLDINEKTSVICSNEILHKKLVGIFG 283
>gnl|CDD|235806 PRK06459, PRK06459, hydrogenase 4 subunit B; Validated.
Length = 585
Score = 75.2 bits (185), Expect = 1e-13
Identities = 77/362 (21%), Positives = 149/362 (41%), Gaps = 31/362 (8%)
Query: 229 FNIYYFLGIDGLSLWFIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALD 288
I +G+ +F ++ + ++ L S++ S +++ + + +
Sbjct: 34 LLITSIYEYNGVLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDN 93
Query: 289 GMLFYIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNK-S 347
+LF +E IP ++ I A F + + ++L+L + + IS +
Sbjct: 94 YLLFLAGWEIMTIPSYVAIALT--KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTN 151
Query: 348 FNILSWHQLSITKIEQIWLFITFFIAFAIKIPIWPMH--TWLPDAHVEAPTEGSVILAAI 405
F+ L I F IK+ + P WLP AH AP+ S IL+A
Sbjct: 152 FSYLP----------SPVPLILASFGFIIKMGMMPFLVSEWLPIAHGNAPSNFSAILSAT 201
Query: 406 MLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAH 465
M +G YG+L+ ++ YF I+ + SI++ +L A V ++K L+A+S+I +
Sbjct: 202 MTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
Query: 466 MG--FVTLGIFMLTKISIQ--------GAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515
G V LG++M+TK I I+ +H++ + +F+S G Q T
Sbjct: 262 NGAILVALGLYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSSGLQEKQSITYSKK 321
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575
I + + + + L G + ++++ S F + + + S I +
Sbjct: 322 IRNRWI------ELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVT 375
Query: 576 AA 577
A
Sbjct: 376 GA 377
Score = 65.6 bits (160), Expect = 1e-10
Identities = 81/351 (23%), Positives = 148/351 (42%), Gaps = 37/351 (10%)
Query: 566 VLTSTALIFSAAYSLCLSKN--------IIFVLGQMIMISGNNLLSIYLGLELMSLTLCV 617
++++ I ++ YS+ I+ +LG I+++ +N L G E+M++ V
Sbjct: 51 IISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYV 110
Query: 618 LIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCS 677
IA K N A + G LS+ +L G + + I+GT F+ +
Sbjct: 111 AIALTKKN---KRPAFVFMAFGELSTVLILAGFAWAFIISGTT----NFSYLPSP----- 158
Query: 678 VLALSLLLIIVGLSFKLGISPFHM--WVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLI 735
+ L+L G K+G+ PF + W+P + A + +LS T L I ++ I
Sbjct: 159 ---VPLILASFGFIIKMGMMPFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTI 215
Query: 736 KCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLF---SIISI 792
+ + +L + FS++ G + A N K ++A+S+I + G +L +
Sbjct: 216 LTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVT 275
Query: 793 KTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQRNPW 852
K ++ F+ L +I Y FA A + L ++ I RN W
Sbjct: 276 KQLITSIEHFS-----LITVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKI----RNRW 326
Query: 853 CALIMMIFMFSLAGFPPTIGFYAKFFIFEKIFETQKIWLLLLIIMCSLIGA 903
L + + SL+G P IG A + + E +F + ++ I+ + GA
Sbjct: 327 IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVTGA 377
Score = 49.8 bits (119), Expect = 7e-06
Identities = 53/224 (23%), Positives = 83/224 (37%), Gaps = 55/224 (24%)
Query: 2 SNNLFQLFLGWEIVGMASYLLIGFWYDKP---------------LAITANLKAF------ 40
S+N GWEI+ + SY+ I L + AF
Sbjct: 91 SDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTT 150
Query: 41 -----------LINRIGAMAKSAQFPLH--TWLPDSMEGPTPASA-LIHAATMVTAGIFM 86
++ G + K P WLP + G P++ I +ATM G++
Sbjct: 151 NFSYLPSPVPLILASFGFIIKMGMMPFLVSEWLPIA-HGNAPSNFSAILSATMTLMGVYG 209
Query: 87 ITRMSPLFELSNTALS--IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGL 144
I +M+ L + IL IGA + F L + ++K ++A+ST+ G + V L
Sbjct: 210 ILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVAL 269
Query: 145 GVSAYTVS---------------IFHLMTHAFFKALLFLSAGSI 173
G Y V+ I + H+ K LFLS+G
Sbjct: 270 G--LYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSSGLQ 311
>gnl|CDD|237166 PRK12666, PRK12666, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 528
Score = 69.9 bits (172), Expect = 4e-12
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 45/313 (14%)
Query: 280 IIGAFCALDGMLF--YIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLI-- 335
+ GAF L G LF ++FFE L + ++ G R A + + L+ S L LI
Sbjct: 122 LNGAF--LTGDLFNLFVFFEVLLAASYGLLLHGSGRARVRAGLHYVAINLVASSLFLIGV 179
Query: 336 SMIYLYYISNKSFNILSWHQLSITKIEQI-----WLFIT----FFIAFAIKIPIWPMHTW 386
+IY L+ L+ +I Q+ L + F IK +WP++ W
Sbjct: 180 GLIY------GVTGTLNMADLAQ-RIAQLPAADRALLEAGAALLLVVFLIKAAMWPLNFW 232
Query: 387 LPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNL----IITLSLISII 442
LP A+ A + + AIM K+G Y +LR S +F + + ++ L ++
Sbjct: 233 LPPAYAAASAPVAALF-AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLA 291
Query: 443 YISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISI 502
+ ++ + +++L AY + G + I + + A+ ++ L ++A+F+
Sbjct: 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
Query: 503 GFLYNQ-------------MKTRLISNFGGIINVIPH----FSVFFIIFSLANCSLPGTS 545
+ Q + + IP + F I +LA LP S
Sbjct: 352 DLVERQRGAAADRLAVTPELYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLS 411
Query: 546 GFIGEFMIILSAV 558
GF+G+F +L A+
Sbjct: 412 GFLGKFA-LLQAL 423
Score = 49.1 bits (118), Expect = 1e-05
Identities = 65/310 (20%), Positives = 118/310 (38%), Gaps = 63/310 (20%)
Query: 631 AAIKYFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLAL----SLLLI 686
A + Y + +++S L G+ ++YG+TGTL + + ++ + + AL + LL+
Sbjct: 160 AGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADL--AQRIAQLPAADRALLEAGAALLL 217
Query: 687 IVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVI-----IYRLLIKCLL-- 739
+V L K + P + W+P Y AS P +LF I IY +L L
Sbjct: 218 VVFLI-KAAMWPLNFWLPPAYAAAS---------APVAALFAIMTKVGIYAILRLSTLLF 267
Query: 740 --------PLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSIIS 791
+W LL + +L G + + +R+ AY + G +L +
Sbjct: 268 GPEAGASAGFGQDW---LLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLL---AA 321
Query: 792 IKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVII------------LLKNNTCNKTDE 839
I + + L+Y++ A A ++ L +
Sbjct: 322 IGLGNPAAT-----AAALYYLVHSTLAA-AALFLLADLVERQRGAAADRLAVTPELYDLD 375
Query: 840 LDIFIGLHQRNPWC-ALIMMIFMF---SLAGFPPTIGFYAKFFIFEKIFETQKI----WL 891
+ + P AL+ ++F +LAG PP GF KF + + + WL
Sbjct: 376 EEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAWWL 435
Query: 892 LLLIIMCSLI 901
L+++ L
Sbjct: 436 WALVLLSGLA 445
Score = 38.3 bits (90), Expect = 0.027
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 21/146 (14%)
Query: 39 AFLINRIGAMAKSAQFPLHTWLPDS-MEGPTPASALIHAATMVTAGIFMITRMSPLF--- 94
FLI K+A +PL+ WLP + P +AL A M GI+ I R+S L
Sbjct: 219 VFLI-------KAAMWPLNFWLPPAYAAASAPVAALF--AIMTKVGIYAILRLSTLLFGP 269
Query: 95 ---ELSNTALSIILFIGAITAFFMGLLGIIQN-DIKRIIAYSTLSQLG--YMTVGLG-VS 147
+ +L G T F G +G++ ++R+ AY L G +GLG +
Sbjct: 270 EAGASAGFGQDWLLPGGLATLAF-GAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPA 328
Query: 148 AYTVSIFHLMTHAFFKALLFLSAGSI 173
A ++++L+ A LFL A +
Sbjct: 329 ATAAALYYLVHSTLAAAALFLLADLV 354
>gnl|CDD|238775 cd01517, PAP_phosphatase, PAP-phosphatase_like domains.
PAP-phosphatase is a member of the inositol
monophosphatase family, and catalyses the hydrolysis of
3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In
Saccharomyces cerevisiae, HAL2 (MET22) is involved in
methionine biosynthesis and provides increased salt
tolerance when over-expressed. Bacterial members of this
domain family may differ in their substrate specificity
and dephosphorylate different targets, as the substrate
binding site does not appear to be conserved in that
sub-set.
Length = 274
Score = 67.3 bits (165), Expect = 6e-12
Identities = 48/239 (20%), Positives = 92/239 (38%), Gaps = 38/239 (15%)
Query: 963 ASEKIITKILFNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCISIAL 1022
++ +IT L +PS + ++ + W++DP+D F Q+ +++AL
Sbjct: 44 GAQALITAALARLFPSDPIVGEEDSA----ALGRFWVLDPIDGTKGFLRGD-QFAVALAL 98
Query: 1023 KQKKQITHSVIYDPI-------RNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFS 1075
+ ++ VI P DLF+A++G GA+L + + ++ +
Sbjct: 99 IEDGEVVLGVIGCPNLPLDDGGGGDLFSAVRGQGAWLR--PLDGSSLQPLSVRQLTNAAR 156
Query: 1076 FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNL------AYVASGKLD-------GFFEK 1122
S E A + + L A VA G D +
Sbjct: 157 AS-FCESVESAHSSHRLQAAIKALGGTPQPVRLDSQAKYAAVARGAADFYLRLPLSMSYR 215
Query: 1123 GLKPWNIAAGSLLIIESGGIISNFKGEKNYLYT--------GDIVAGNQKIFSQIISLI 1173
K W+ AAG L++ E+GG +++ G K + G ++A +I Q++ +
Sbjct: 216 -EKIWDHAAGVLIVEEAGGKVTDADG-KPLDFGKGRKLLNNGGLIAAPGEIHEQVLEAL 272
>gnl|CDD|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain. A superfamily of
metal-dependent phosphatases with various substrates.
Fructose-1,6-bisphospatase (both the major and the
glpX-encoded variant) hydrolyze
fructose-1,6,-bisphosphate to fructose-6-phosphate in
gluconeogenesis. Inositol-monophosphatases and inositol
polyphosphatases play vital roles in eukaryotic
signalling, as they participate in metabolizing the
messenger molecule Inositol-1,4,5-triphosphate. Many of
these enzymes are inhibited by Li+.
Length = 184
Score = 63.2 bits (154), Expect = 3e-11
Identities = 45/230 (19%), Positives = 87/230 (37%), Gaps = 55/230 (23%)
Query: 924 EAIKAARKSALIINRGSLELENLRFEEKKYEN-FVFNINKASEKIITKILFNTYPSYAFL 982
E + A+++ L I + + + + K +N V + A+E +I +L +++P +
Sbjct: 3 ELCRVAKEAGLAILKAFGRELSGKVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVKIV 62
Query: 983 IKKSNYLTNFENEN---IWIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPI-R 1038
++S W+IDP+D NF + P + IA+ + + R
Sbjct: 63 GEESGVAEEVMGRRDEYTWVIDPIDGTKNFINGLPFVAVVIAV----YVILILAEPSHKR 118
Query: 1039 NDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIITKCKNL 1098
D A A RIR+
Sbjct: 119 VDEKKAELQLLA---VYRIRIV-------------------------------------- 137
Query: 1099 RNIGTSSLNLAYVASGKLDGFFEKGLK--PWNIAAGSLLIIESGGIISNF 1146
G++ + VA G D ++E G K W++AA + ++ E+GGI++++
Sbjct: 138 ---GSAVAKMCLVALGLADIYYEPGGKRRAWDVAASAAIVREAGGIMTDW 184
>gnl|CDD|237164 PRK12664, PRK12664, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 527
Score = 64.8 bits (158), Expect = 2e-10
Identities = 81/373 (21%), Positives = 146/373 (39%), Gaps = 53/373 (14%)
Query: 520 IINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFSAAYS 579
+ V+ S++ F L LP E + L V F L L +
Sbjct: 1 MTMVLYAISLYGFFFGLIFIVLPLLLYDWSEPVYNLDLVLFIVLSFSLALIFLYILPIKN 60
Query: 580 LCLSKNIIFVL---GQMIMISGNNLLSIYLGLELMSLTLCVLIA--SQKNNIFSSEAAIK 634
+ S+ + ++L + IS ++L + +G E M+L+ ++IA NI A I
Sbjct: 61 MRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIG---AFIH 117
Query: 635 YFILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKL 694
Y + S +L G S N LL ++GL
Sbjct: 118 YACVHFFSGVLLLVGAS-------------------GQAQNGQYTGYCKLLFMLGLLINC 158
Query: 695 GISPFHMWVPDVYQGASIIITLLLST-TPKLSLFVIIYRLLIKCLLPLVINWQKILLILA 753
P WV D Y AS ++LS T K++ V++ L + ++ILL L
Sbjct: 159 ACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLL----------LFFSGEEILLFLG 208
Query: 754 IFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI--ISIKTSHNNLIIFNSCDSGLFY 811
I + I G + A + N +R++ Y+ + MGL++ +I ++I S ++
Sbjct: 209 IITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAIGILILQIVLSVVYQ 268
Query: 812 IITYIFAILGAFGVIILLKNNTCNKTDELDIF-IGLHQRNPWCALIMMIFMFSLAGFPPT 870
+ ++ A ++ N+T + ++ +G + A+ +I + ++ FP T
Sbjct: 269 TLLFMVA------------DSVINRTRKFNLNRVGGLFKMSLEAMCCIIAILNMGAFPGT 316
Query: 871 IGFYAKFFIFEKI 883
GF +K I I
Sbjct: 317 AGFVSKSLITHSI 329
Score = 59.7 bits (145), Expect = 6e-09
Identities = 43/180 (23%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 45 IGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFMITRMSPLFELSNTALSII 104
+G + A FP +W+ D+ +A +++ + + L S I+
Sbjct: 152 LGLLINCACFPASSWVVDAY-----PAASNFGIIVLSLFTTKVAALVLLLFFSGE--EIL 204
Query: 105 LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGVS-----AYTVSIFHLMTH 159
LF+G ITA + + ++ +I+R++ Y+ + Q+G + + +G S A + I ++
Sbjct: 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAIGILILQIVLS 264
Query: 160 AFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIGLLSLVGAPFFSGFYSK 219
++ LLF+ A S+I + ++ +GGL+K M + + +I +L++ P +GF SK
Sbjct: 265 VVYQTLLFMVADSVINRTRK-FNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSK 322
Score = 47.8 bits (114), Expect = 3e-05
Identities = 65/312 (20%), Positives = 128/312 (41%), Gaps = 29/312 (9%)
Query: 244 FIPLTAFITLIIILISLDIKKKLAEYMSAFLILSGLIIGAFCALDGMLFYIFFEATLIPI 303
FI L+ + LI + I L IK M +L+ I A + L I FE +
Sbjct: 41 FIVLSFSLALIFLYI-LPIKNMRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSA 99
Query: 304 FIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYISNKSFNILSWHQLSITKIEQ 363
+II A I + +L+L+ S +
Sbjct: 100 LMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVG--------------ASGQAQNGQYTGY 145
Query: 364 IWLFITFFIAFAIKIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKLGCYGLLRFSLPIFP 423
L F + I +P +W+ DA+ A G ++L+ K+ LL F
Sbjct: 146 CKLL--FMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF------ 197
Query: 424 DASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMGFVTLGIFML--TKISI 481
+ +++ L +I+ IY + A ++ +I++L+ Y+ + MG + + I + ++I
Sbjct: 198 ---FSGEEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAI 254
Query: 482 QGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHFSVFFIIFSLANCSL 541
I+Q++ + + +F+ + N+ + ++ GG+ + ++ II L +
Sbjct: 255 GILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLFKM-SLEAMCCIIAILNMGAF 313
Query: 542 PGTSGFIGEFMI 553
PGT+GF+ + +I
Sbjct: 314 PGTAGFVSKSLI 325
>gnl|CDD|235837 PRK06591, PRK06591, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 432
Score = 63.6 bits (155), Expect = 2e-10
Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 591 GQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGI 650
G + MI+ N+ ++Y+ +E+ +L+ VLIA NN S A Y I+G + + +L I
Sbjct: 127 GYLGMIATNDFFNLYVFIEISALSSYVLIA-SGNNPKSLIGAFDYLIMGSIGATLILIAI 185
Query: 651 SILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGA 710
L ITG+L + I ++ + N ++ +++ ++G K P H W+ Y
Sbjct: 186 GFLLSITGSLNMTDIAAYLQ-EHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNT 244
Query: 711 SIIITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLI-------LAIFSLIIGNVS 763
+ +I + L+ + IIY+ ++I ++ I +A+ +LII
Sbjct: 245 ASVILVYLAGISTIIGIYIIYKFTY-----IIIGYETIKTAITNFIRPIALATLIIAPYF 299
Query: 764 AITQYNFKRMIAYSSIAHMGLMLFSIISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAF 823
A NFK +I YS +G +F + II + +
Sbjct: 300 AYQAKNFKNIIIYSCFTQIGY----------------VFLLYVTENGIIILPSLLLADSI 343
Query: 824 GVIILLKNNTCNKTDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYAKFFIFEKI 883
I L +D + ++R P LI++ + S G P + F+ K I E +
Sbjct: 344 NKIALFL---------IDAYNESYKREPNKVLIIIAIICSC-GLPISPLFFIKVNILELL 393
Query: 884 FETQKIWLLLLIIMCSLIGA 903
TQ + L +II+ S +G+
Sbjct: 394 L-TQNLLLDFIIILLSSVGS 412
Score = 50.2 bits (120), Expect = 5e-06
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 26/291 (8%)
Query: 293 YIFFEATLIPIFIIIGTWGGSNRSYAAIKFFLYTLMGSLLMLISMIYLYYI--SNKSFNI 350
Y+F E + + +++I + A + + +G+ L+LI++ +L I S +I
Sbjct: 141 YVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDI 200
Query: 351 LSWHQLSITKIEQIWLFITFFIAFAI-KIPIWPMHTWLPDAHVEAPTEGSVILAAIMLKL 409
++ Q T I + I FF+ AI K +PMH W+ A+ + V LA I +
Sbjct: 201 AAYLQ-EHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTII 259
Query: 410 GCYGLLRFSLPI--FPDASYYFSNLIITLSLISIIYISLIAMVQIDIKKLIAYSSIAHMG 467
G Y + +F+ I + +N I ++L ++I A + K +I YS +G
Sbjct: 260 GIYIIYKFTYIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIG 319
Query: 468 FVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLISNFGGIINVIPHF 527
+V L +T+ I +++ ++ A+F LI + P+
Sbjct: 320 YVFL--LYVTENGIIILPSLLLADSINKIALF-------------LIDAYNESYKREPN- 363
Query: 528 SVFFIIFSLANCSLPGTSGFIGEFMIILSAVK----FNFCIGVLTSTALIF 574
V II + +C LP + F + I+ + +F I +L+S +F
Sbjct: 364 KVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLF 414
Score = 33.2 bits (76), Expect = 0.89
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 27 YDKPLAITANLKAFLINRIGAMAKSAQFPLHTWLPDSMEGPTPASALIHAATMVTAGIFM 86
+ IT + FLI GA+ K+A FP+H W+ + + A GI++
Sbjct: 207 HTNSRIITIAIGFFLI---GAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYI 263
Query: 87 ITRMSPL---FELSNTALS-IILFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYM 140
I + + + +E TA++ I I T + K II YS +Q+GY+
Sbjct: 264 IYKFTYIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
>gnl|CDD|130398 TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nucleotidase,
bacterial. Sulfate is incorporated into
3-phosphoadenylylsulfate, PAPS, for utilization in
pathways such as methionine biosynthesis. Transfer of
sulfate from PAPS to an acceptor leaves adenosine
3'-5'-bisphosphate, APS. This model describes a form
found in bacteria of the enzyme 3'(2'),5'-bisphosphate
nucleotidase, which removes the 3'-phosphate from APS to
regenerate AMP and help drive the cycle [Central
intermediary metabolism, Sulfur metabolism].
Length = 249
Score = 59.8 bits (145), Expect = 1e-09
Identities = 53/248 (21%), Positives = 86/248 (34%), Gaps = 45/248 (18%)
Query: 926 IKAARKSALIINRGSLELENLRFEEKKYENF-------VFNINKASEKIITKILFNTYPS 978
IK AR + I L +K+ V ++A+ + I + L P
Sbjct: 6 IKIARAAGEEI---------LPVYQKELAVAQKADNSPVTEADRAAHRFILEGLRALTPD 56
Query: 979 YAFLIKKSNYLTNFENENI-----------WIIDPLDNITNFSHNFPQYCISIALKQKKQ 1027
L + E+ +I W++DPLD F + + ++IAL +
Sbjct: 57 IPVLSE--------EDASIPLTPRQTWQRFWLVDPLDGTKEFINRNGDFTVNIALVEHGV 108
Query: 1028 ITHSVIYDPIRNDLFTAIKGCGAYL----NEKRIRVNKRNKINDALIGTDFSFKNNINSE 1083
V+Y P + A G A + ++ R + L+ +
Sbjct: 109 PVLGVVYAPATGVTYFATAGKAAKREGDGQALKAPIHVRPWPSGPLLVVISRSHAEEKTT 168
Query: 1084 EYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKG-LKPWNIAAGSLLIIESGGI 1142
EY +LR G SSL VA G D + G W+ AAG ++ +GG
Sbjct: 169 EYLANLG-----YDLRTSGGSSLKFCLVAEGSADIYPRLGPTGEWDTAAGHAVLAAAGGA 223
Query: 1143 ISNFKGEK 1150
I + G
Sbjct: 224 IFDLDGSP 231
>gnl|CDD|238820 cd01642, Arch_FBPase_2, Putative fructose-1,6-bisphosphatase or
related enzymes of inositol monophosphatase family. These
are Mg++ dependent phosphatases. Members in this family
may have fructose-1,6-bisphosphatase and/or
inositol-monophosphatase activity.
Fructose-1,6-bisphosphatase catalyzes the hydrolysis of
fructose-1,6-biphosphate into fructose-6-phosphate and
is critical in gluconeogenesis pathway.
Length = 244
Score = 57.8 bits (140), Expect = 5e-09
Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 52/200 (26%)
Query: 960 INKASEKIITKIL------FNTYPSYAFLIKKSNYLTNFENENIWIIDPLDNITNFSHNF 1013
+ +E+II K+L + I+K + E I ++DPLD TN+
Sbjct: 39 ADLKAEEIILKLLREEGVFGQIISEESGEIRKGSG------EYIAVLDPLDGSTNYLSGI 92
Query: 1014 PQYCISIALKQKKQ-------------ITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVN 1060
P Y +S+AL + +Y P +Y++
Sbjct: 93 PFYSVSVALADPRSKVKAATLDNFVSGEGGLKVYSPPTR---------FSYISV------ 137
Query: 1061 KRNKINDALIGTDFS-----FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGK 1115
K+ L+ S ++ N E++ + + K R++G+++L LAY G
Sbjct: 138 --PKLGPPLVPEVPSKIGIYEGSSRNPEKFLLLSRNGLK---FRSLGSAALELAYTCEGS 192
Query: 1116 LDGFFEK--GLKPWNIAAGS 1133
F + L+ +++AA
Sbjct: 193 FVLFLDLRGKLRNFDVAAAL 212
>gnl|CDD|178499 PLN02911, PLN02911, inositol-phosphate phosphatase.
Length = 296
Score = 50.1 bits (120), Expect = 3e-06
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 961 NKASEKIITKILFNTYPSYA-FLIKKSNYLTNFENENIWIIDPLDNITNFSHNFPQYCIS 1019
++A+E+ + I+ +PS+A F + ++ +W++DP+D +F P +
Sbjct: 74 DRAAEEAMRSIILENFPSHAIFGEEHGLRCGEGSSDYVWVLDPIDGTKSFITGKPLFGTL 133
Query: 1020 IALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRIRVNKRNKINDALIGTD----FS 1075
IAL K + +I P+ + + + G LN + I + DA + T FS
Sbjct: 134 IALLYKGKPVLGIIDQPVLKERWVGVAGRATTLNGEEISTRSCASLKDAYLYTTSPHMFS 193
Query: 1076 FKNNINSEEYAKIFQIITKCKNLRNIGTSSLNLAYVASGKLDGFFEKGLKPWNIAAGSLL 1135
+ ++ K K + G +ASG +D E GLKP++ A L+
Sbjct: 194 ------GDAEDAFARVRDKVK-VPLYGCDCYAYGLLASGHVDLVVESGLKPYDYLA--LV 244
Query: 1136 -IIE-SGGIISNFKGEK 1150
++E +GG+I+++KG K
Sbjct: 245 PVVEGAGGVITDWKGRK 261
>gnl|CDD|168619 PRK06588, PRK06588, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 506
Score = 46.3 bits (110), Expect = 9e-05
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 587 IFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKYFILGILSSGFM 646
++ L +I + + +S+ + LE M++ C++I + I + A +YF+ + SSG +
Sbjct: 56 LYCLSSIICVFAADFISMIISLEFMTIFACIIIFCDQLKI---KPARQYFLTHLFSSGLI 112
Query: 647 LYGISILYGITGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDV 706
L G+++L T S+ + NN L + I+ G + WV +
Sbjct: 113 LIGMTLLIQTTSNTAFTSLTESV--NNFE-----LPAIFILAGCLINASAIFVNGWVVNC 165
Query: 707 YQGASII-ITLLLSTTPKLSLFVIIYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAI 765
Y AS I L+S T K++L +II +L + +IL I +I G V ++
Sbjct: 166 YPIASSSGIVYLISFTTKVTL-IIILKLF---------SGLEILKFFGISMIIYGLVFSL 215
Query: 766 TQYNFKRMIAYSSIAHMGLMLFSI 789
+ N KR+I Y +++ +G +L +I
Sbjct: 216 IEKNLKRLICYLTVSQLGFILAAI 239
>gnl|CDD|182848 PRK10931, PRK10931, adenosine-3'(2'),5'-bisphosphate nucleotidase;
Provisional.
Length = 246
Score = 35.8 bits (83), Expect = 0.079
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 32/171 (18%)
Query: 998 WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDPIRNDLFTAIKGCGAYLNEKRI 1057
W++DPLD F ++ ++IAL ++ + V+Y P+ N +++A +G A+ E +
Sbjct: 80 WLVDPLDGTKEFIKRNGEFTVNIALIEQGKPVLGVVYAPVMNVMYSAAEG-KAWKEECGV 138
Query: 1058 RVNKRNKINDA---LIGTDFSFKNNINSEEYAKIF---QIITKCKNLRNIGTSSLNLAYV 1111
R K+ ++ DA L+ S + +EY + Q + IG SSL V
Sbjct: 139 R--KQIQVRDARPPLVVISRSHADA-ELKEYLQQLGEHQTTS-------IG-SSLKFCLV 187
Query: 1112 ASGKLDGFFEKGLKP-------WNIAAGSLLIIESGGIISNFKGEKNYLYT 1155
A G+ L P W+ AAG + I +G + +++G K YT
Sbjct: 188 AEGQAQ------LYPRFGPTNIWDTAAGHAVAIAAGAHVHDWQG-KTLDYT 231
>gnl|CDD|224397 COG1480, COG1480, Predicted membrane-associated HD superfamily
hydrolase [General function prediction only].
Length = 700
Score = 32.7 bits (75), Expect = 1.4
Identities = 51/284 (17%), Positives = 99/284 (34%), Gaps = 54/284 (19%)
Query: 397 EGSVILAAIMLKLGCYGLLRFSLPIFPDASYYFSNLIITLSLISIIYISLIAM-VQIDIK 455
EG +I + L GLL S+ I P L+I L L+ +Y +++
Sbjct: 250 EGEIITDEDYVILDLLGLLSLSVNILPLL--GLLILVIFLILLFALYERRTKSPLKLRNS 307
Query: 456 KLIAYSSIAHMGFVTLGIFMLTKISIQGAIIQMISHALISSAMFISIGFLYNQMKTRLIS 515
L+ Y S+A +TL + + + + + G L
Sbjct: 308 LLLLYLSLA---ILTLSLLRI-----------------VGYFNYSASGLLV--------- 338
Query: 516 NFGGIINVIPHFSVFFIIFSLANCSLPGTSGFIGEFMIILSAVKFNFCIGVLTSTALIFS 575
P ++ L + +L ++ + AL+ S
Sbjct: 339 ---------PPALGPMLLILLVF-LRIAIFSSSMIAIALLYLFGGSYNSEI-ALIALLSS 387
Query: 576 AAYSLCLSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLCVLIASQKNNIFSSEAAIKY 635
+ + L K + ++ ++L L M L L ++ A + + + AI
Sbjct: 388 FSALVLLRK--MSRRSDILKSG------LFLALMNMLLLLSLIFAFTLSWYDALQDAIFA 439
Query: 636 FILGILSSGFMLYGISILYGITGTLELQSIFNVIKLNNINCSVL 679
F+ G+LS +L + + G L + F +++L+N N +L
Sbjct: 440 FLSGLLSGILVLGLLPYFEALFGLL---TTFRLLELSNPNHPLL 480
>gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated.
Length = 646
Score = 32.6 bits (75), Expect = 1.6
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 90 MSPLFELSNTALSII---LFIGAITAFFMGLLGIIQNDIKRIIAYSTLSQLGYMTVGLGV 146
P N ++I+ L IG I F LLG I N K + L+QLG++ + LG+
Sbjct: 432 GYPSLSTENDVMTILIISLLIGVIHLFLGLLLGFINNVRKGDYKDAFLAQLGWLLILLGI 491
Query: 147 SAYTVSIFHLMTH---AFFKALLFLSAGSIIINMKHNQDIRNMGGLYKYMPITCITSLIG 203
+ F L+ + G ++I + D +++GG + + IT +G
Sbjct: 492 LLIVLGGFGLVVGLGPLGLIGKYLIIGGVVLIILGEGIDGKSLGGALGGLGLYEITGYLG 551
>gnl|CDD|225803 COG3264, COG3264, Small-conductance mechanosensitive channel [Cell
envelope biogenesis, outer membrane].
Length = 835
Score = 32.4 bits (74), Expect = 1.6
Identities = 20/170 (11%), Positives = 45/170 (26%), Gaps = 23/170 (13%)
Query: 730 IYRLLIKCLLPLVINWQKILLILAIFSLIIGNVSAITQYNFKRMIAYSSIAHMGLMLFSI 789
I RLL L P +W+ ++ ++ +R + S + +
Sbjct: 324 IARLLGAALTPTAPSWRLFMVCDRFAHFLM---PREQAMALRRGLVRS-----LGAINPL 375
Query: 790 ISIKTSHNNLIIFNSCDSGLFYIITYIFAILGAFGVIILLKNNTCNKTDELDIFIGLHQR 849
+ ++ D GL + I+ A LL +
Sbjct: 376 L------GAPLVLTVADDGLASDVIGQLGIIAALLAPALLVARLKDA--------AWRAY 421
Query: 850 NPWCALIMMIFMFSLAGFPPTIGFYAK-FFIFEKIFETQKIWLLLLIIMC 898
+ ++ G+ F+ ++ T I ++
Sbjct: 422 PRLLLITVLSAAPLALIVAALTGYLYTALFLALRLVVTVAILFTWYVLYI 471
>gnl|CDD|187793 cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily
protein Csm5. CRISPR (Clustered Regularly Interspaced
Short Palindromic Repeats) and associated Cas proteins
comprise a system for heritable host defense by
prokaryotic cells against phage and other foreign DNA;
RAMP superfamily protein.
Length = 365
Score = 31.7 bits (72), Expect = 2.1
Identities = 36/207 (17%), Positives = 63/207 (30%), Gaps = 53/207 (25%)
Query: 933 ALIINRGSLELENLRFEEKKYENFVFNINKA-SEKIITKIL------FNTYPSYAFLIKK 985
+I+ L + L + K E+ N + A S + ++L Y Y+ K
Sbjct: 31 IYVIDFEKLYADLLEKKRKDEESGDNNRDYAGSNAELKEVLEEVKLDPAKYRDYS--SKI 88
Query: 986 SNYLTNFENENIWIIDPL---------------------------DNITNFSHNFPQYCI 1018
+ + I PL D +T ++ +
Sbjct: 89 GIPEPRKASRHKKFIKPLGRPYIPGSSIKGAIRTALLWNYLKKNTDLLTRVPNHLQKDLR 148
Query: 1019 SI-----ALKQKKQITHSVIYDPIRNDLFTAIKGCGAYL--------NEKRIRVNKRNKI 1065
+ KK + I I ND+F A+K + + ++ N R +
Sbjct: 149 QYGRAFERKELKKNGISNTIPKKIVNDVFRALKVSDSRPLRTSRLIVHRIKLNYNGRPIL 208
Query: 1066 NDAL----IGTDFSFKNNINSEEYAKI 1088
GT FSF I+ EE +
Sbjct: 209 PFYREFLDSGTTFSFNVKIDREELKRG 235
>gnl|CDD|234799 PRK00578, prfB, peptide chain release factor 2; Validated.
Length = 367
Score = 31.4 bits (72), Expect = 3.4
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 10/73 (13%)
Query: 1061 KRNKINDALIG--TDFSFKNNINSEEYAKIFQIITKCKNLR-NIGTSSLNLAYVASGKLD 1117
KR DAL G + + + I S Y + K+LR T N V G LD
Sbjct: 300 KRAAEKDALKGEKKEIGWGSQIRS--Y--VLHPYQMVKDLRTGYETG--NTQAVLDGDLD 353
Query: 1118 GFFEKGLKPWNIA 1130
GF E L+ W +
Sbjct: 354 GFIEAYLR-WRAS 365
>gnl|CDD|233360 TIGR01330, bisphos_HAL2, 3'(2'),5'-bisphosphate nucleotidase, HAL2
family. Sulfate is incorporated into
3-phosphoadenylylsulfate, PAPS, for utilization in
pathways such as methionine biosynthesis. Transfer of
sulfate from PAPS to an acceptor leaves adenosine
3'-5'-bisphosphate, APS. This model describes a form
found in plants of the enzyme 3'(2'),5'-bisphosphate
nucleotidase, which removes the 3'-phosphate from APS to
regenerate AMP and help drive the cycle. Sensitivity of
this essential enzyme to sodium and other metal ions
results is responsible for characterization of this
enzyme as a salt tolerance protein. Some members of this
family are active also as inositol 1-monophosphatase.
Length = 353
Score = 31.0 bits (70), Expect = 4.4
Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 54/219 (24%)
Query: 998 WIIDPLDNITNFSHNFPQYCISIALKQKKQITHSVIYDP-------IRND---------L 1041
W++DP+D F QY + +AL + ++ VI P + +
Sbjct: 133 WVLDPIDGTKGFLRG-DQYAVCLALIENGKVVLGVIGCPNLPLSSYGAQNLKGSESKGCI 191
Query: 1042 FTAIKGCGAYL----NEK----RIRVNKRNKINDALIGTDFSFKNNINSEEYAKIFQIIT 1093
F A++G GA++ ++ ++ V+ DA+ K + + +E I
Sbjct: 192 FRAVRGSGAFMYSLSSDAESPTKVHVSSVKDTKDAIFCEGVE-KGHSSHDEQTAI----- 245
Query: 1094 KCKNLRNIGTSSLNL----AYVASGKLDG-----FFEKGL---KPWNIAAGSLLIIESGG 1141
N I S L L Y A + D K K W+ AAG++++ E+GG
Sbjct: 246 --ANKLGISKSPLRLDSQAKYAALARGDADVYLRLPIKLSYQEKIWDHAAGNVIVEEAGG 303
Query: 1142 IISNF--------KGEKNYLYTGDIVA-GNQKIFSQIIS 1171
I+++ KG L G I A G + + ++S
Sbjct: 304 IVTDAMGKPLDFGKGRTLALDKGVIAASGPRVLHDLVVS 342
>gnl|CDD|224166 COG1245, COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog
[General function prediction only].
Length = 591
Score = 30.3 bits (69), Expect = 6.8
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 11/67 (16%)
Query: 916 GSPGIY-IVEAIKAARKSALIIN---RGSLELENLRFEEKKYENFVFNINKASEKIITKI 971
G PG+Y +V K+ R IN +G L EN+RF + E F +
Sbjct: 288 GEPGVYGVVSKPKSVRVG---INEYLKGYLPEENVRF--RPEE-IEFEEKPPRDDKARDT 341
Query: 972 LFNTYPS 978
L YP
Sbjct: 342 LVE-YPD 347
>gnl|CDD|177131 MTH00059, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 289
Score = 29.9 bits (68), Expect = 8.3
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 29/135 (21%)
Query: 599 NNLLSIYLGLELMSLTL--CVLIASQKNNIFSSEAAIKYFILGILSSGFMLYGISILYGI 656
++LL ++ LEL L+L C ++S N + + + Y ++ LSS ++ G+
Sbjct: 26 DSLLGFWVFLELCGLSLIPCFFLSSNSNVLNFYSSLLSYIVMSGLSSSLLVSGL------ 79
Query: 657 TGTLELQSIFNVIKLNNINCSVLALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITL 716
+ + I G K G+ PF WV V+ +S ++
Sbjct: 80 ---------------------LFSDLYFFIFFGFVVKFGLFPFMFWVYRVFSNSSWVVIW 118
Query: 717 LLSTTPKLSLFVIIY 731
L+S K + +
Sbjct: 119 LISVVMKFPVLFFCF 133
>gnl|CDD|153125 cd02434, Nodulin-21_like_3, Nodulin-21 and CCC1-related protein
family. Nodulin-21_like_3: This is a family of proteins
closely related to nodulin-21, a plant nodule-specific
protein that may be involved in symbiotic nitrogen
fixation. This family is also related to CCC1, a yeast
vacuole transmembrane protein that functions as an iron
and manganese transporter. .
Length = 225
Score = 29.6 bits (67), Expect = 8.6
Identities = 10/66 (15%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 837 TDELDIFIGLHQRNPWCALIMMIFMFSLAGFPPTIGFYA-KFFIFEKIFETQKIWLLLLI 895
T+EL + +P ++ F + G P + + ++ +K ++ +L+
Sbjct: 120 TEELGLIPDDELPSPLKTALVTFLSFLVFGIIPLLPYLLGLYYYSQKEIDSVFALSILIF 179
Query: 896 IMCSLI 901
+ +L
Sbjct: 180 VAFTLF 185
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and
metabolism].
Length = 917
Score = 30.0 bits (68), Expect = 8.8
Identities = 38/201 (18%), Positives = 78/201 (38%), Gaps = 30/201 (14%)
Query: 582 LSKNIIFVLGQMIMISGNNLLSIYLGLELMSLTLC--VLIA------------------S 621
LSKN+ VL +I N L+L+ + L L A
Sbjct: 709 LSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRG 768
Query: 622 QKNNIFSSEAAIKY-FILGILSS--GFMLYGISILYGITGTLELQSIFNVIKLNNINCSV 678
+ +F+ + ++ I+G+LS+ + + + +L I TL L +++ V
Sbjct: 769 PEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLV 828
Query: 679 LALSLLLIIVGLSFKLGISPFHMWVPDVYQGASIIITLLLSTTPKLSLFVIIYRLLIKCL 738
L LLL + S + Y ++++ ++L L + + L +K
Sbjct: 829 LI-QLLLTLAVRSRGRPFLSSL-LFSNKYLWLALLVIIILQL-----LIIFLPPLNLKIF 881
Query: 739 LPLVINWQKILLILAIFSLII 759
P ++ + L+ +A+ L++
Sbjct: 882 QPTPLSLFEWLIAIAVALLLL 902
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.329 0.144 0.430
Gapped
Lambda K H
0.267 0.0760 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 61,615,465
Number of extensions: 6614072
Number of successful extensions: 13399
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11621
Number of HSP's successfully gapped: 1399
Length of query: 1178
Length of database: 10,937,602
Length adjustment: 108
Effective length of query: 1070
Effective length of database: 6,147,370
Effective search space: 6577685900
Effective search space used: 6577685900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 65 (28.8 bits)