BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5228
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6SY74|CLPP_JANMA ATP-dependent Clp protease proteolytic subunit OS=Janthinobacterium
sp. (strain Marseille) GN=clpP PE=3 SV=1
Length = 210
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/113 (81%), Positives = 103/113 (91%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKPNVSTLC GLAASMGAFLLA+G KGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA
Sbjct: 97 MQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 156
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR+RLN IL+E+TG SV++I++DTDRDNFMSA A+ Y +IDK+L R
Sbjct: 157 REILYLRERLNAILAERTGKSVEEIAKDTDRDNFMSADAAVTYGMIDKVLATR 209
>sp|Q8XYP7|CLPP_RALSO ATP-dependent Clp protease proteolytic subunit OS=Ralstonia
solanacearum (strain GMI1000) GN=clpP PE=3 SV=1
Length = 217
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/113 (77%), Positives = 101/113 (89%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+G+AASMGAFLLA+G KGKR++LPNSRIMIHQPLGGA+GQASDIEIQA
Sbjct: 103 MQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEIQA 162
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR+RLN ILSE TG V KI++DTDRDNFMS A EY LIDK+L +R
Sbjct: 163 REILYLRERLNTILSEVTGQPVDKIARDTDRDNFMSGDQAKEYGLIDKVLARR 215
>sp|B3R4W1|CLPP_CUPTR ATP-dependent Clp protease proteolytic subunit OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=clpP PE=3 SV=1
Length = 216
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/113 (77%), Positives = 102/113 (90%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+G+AASMGAFLLA+G KGKR +LPNSRIMIHQPLGGA+GQASDIEIQA
Sbjct: 103 MQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQA 162
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR+RLN ILSE TG V+KI++DTDRDNFMS A++Y LIDK+L +R
Sbjct: 163 REILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVLARR 215
>sp|Q0KBK4|CLPP_CUPNH ATP-dependent Clp protease proteolytic subunit OS=Cupriavidus
necator (strain ATCC 17699 / H16 / DSM 428 / Stanier
337) GN=clpP PE=3 SV=1
Length = 216
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/113 (77%), Positives = 102/113 (90%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+G+AASMGAFLLA+G KGKR +LPNSRIMIHQPLGGA+GQASDIEIQA
Sbjct: 103 MQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQA 162
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR+RLN ILSE TG V+KI++DTDRDNFMS A++Y LIDK+L +R
Sbjct: 163 REILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVLARR 215
>sp|Q1LM62|CLPP_RALME ATP-dependent Clp protease proteolytic subunit OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=clpP PE=3 SV=1
Length = 216
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/113 (76%), Positives = 101/113 (89%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+V TLC+G+AASMGAFLLA+G KGKR +LPNSRIMIHQPLGGA+GQASDIEIQA
Sbjct: 103 MQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQA 162
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR+RLN ILSE TG V+KI++DTDRDNFMS A++Y LIDK++ +R
Sbjct: 163 REILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVITRR 215
>sp|Q472D3|CLPP_CUPPJ ATP-dependent Clp protease proteolytic subunit OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=clpP PE=3
SV=1
Length = 216
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 101/113 (89%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+V TLC+G+AASMGAFLLA+G KGKR +LPNSRIMIHQPLGGA+GQASDIEIQA
Sbjct: 103 MQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQA 162
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR+RLN ILSE TG V+KI++DTDRDNFMS A++Y LIDK++ +R
Sbjct: 163 REILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVIARR 215
>sp|Q39FE8|CLPP_BURS3 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp.
(strain 383) GN=clpP PE=3 SV=1
Length = 217
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 104/113 (92%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+GLAASMGAFLLASG KGKRF+LPNSR+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYL++RLN++L++ TG V++I++DTDRDNFMS++ A Y LID++L +R
Sbjct: 164 REILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLKR 216
>sp|A1K783|CLPP_AZOSB ATP-dependent Clp protease proteolytic subunit OS=Azoarcus sp.
(strain BH72) GN=clpP PE=3 SV=1
Length = 212
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKPNVSTLCIG AASMGAFLLA+G KGKRF LPNSR+MIHQPLGG QGQASDIEI A
Sbjct: 97 MQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHA 156
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR+RLN +L++ TG ++++I +DTDRDNFMSA A+EY L+DK+L R
Sbjct: 157 REILYLRERLNGMLAKHTGQTIEQIEKDTDRDNFMSATAAVEYGLVDKVLTSR 209
>sp|Q0BEF6|CLPP_BURCM ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
ambifaria (strain ATCC BAA-244 / AMMD) GN=clpP PE=3 SV=1
Length = 217
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 103/113 (91%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+GLAASMGAFLLASG KGKRF+LPNSR+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYL++RLN +L++ TG V++I++DTDRDNFMS++ A Y LID++L +R
Sbjct: 164 REILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLKR 216
>sp|A0K847|CLPP_BURCH ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
cenocepacia (strain HI2424) GN=clpP PE=3 SV=1
Length = 217
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 103/113 (91%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+GLAASMGAFLLASG KGKRF+LPNSR+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYL++RLN +L++ TG V++I++DTDRDNFMS++ A Y LID++L +R
Sbjct: 164 REILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLKR 216
>sp|Q1BH85|CLPP_BURCA ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1
Length = 217
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 103/113 (91%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+GLAASMGAFLLASG KGKRF+LPNSR+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYL++RLN +L++ TG V++I++DTDRDNFMS++ A Y LID++L +R
Sbjct: 164 REILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLKR 216
>sp|A4JF05|CLPP_BURVG ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1
Length = 217
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 102/113 (90%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+GLAASMGAFLLASG KGKRF+LPNSR+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYL++RLN +L++ TG V++I++DTDRDNFMS+ A Y LID++L +R
Sbjct: 164 REILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAYGLIDQVLLKR 216
>sp|Q7VXI7|CLPP_BORPE ATP-dependent Clp protease proteolytic subunit OS=Bordetella
pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
GN=clpP PE=3 SV=1
Length = 217
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC GLAASMGAFLLA+G KGKRF+LPNSRIMIHQP GGAQGQASDI+IQA
Sbjct: 102 MQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQA 161
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REIL LR+RLN IL+E TG V++I+ DT+RDNFMSA+ A+ Y L+DK+L R
Sbjct: 162 REILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLTSR 214
>sp|Q7W8X2|CLPP_BORPA ATP-dependent Clp protease proteolytic subunit OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=clpP PE=3 SV=1
Length = 217
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC GLAASMGAFLLA+G KGKRF+LPNSRIMIHQP GGAQGQASDI+IQA
Sbjct: 102 MQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQA 161
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REIL LR+RLN IL+E TG V++I+ DT+RDNFMSA+ A+ Y L+DK+L R
Sbjct: 162 REILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLTSR 214
>sp|Q7WK83|CLPP_BORBR ATP-dependent Clp protease proteolytic subunit OS=Bordetella
bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
GN=clpP PE=3 SV=1
Length = 217
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC GLAASMGAFLLA+G KGKRF+LPNSRIMIHQP GGAQGQASDI+IQA
Sbjct: 102 MQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQA 161
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REIL LR+RLN IL+E TG V++I+ DT+RDNFMSA+ A+ Y L+DK+L R
Sbjct: 162 REILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLTSR 214
>sp|A9IR54|CLPP_BORPD ATP-dependent Clp protease proteolytic subunit OS=Bordetella petrii
(strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=clpP
PE=3 SV=1
Length = 217
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC GLAASMGAFLLA+G KGKRF+LPNSRIMIHQP GGAQGQASDI+IQA
Sbjct: 102 MQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQA 161
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REIL LR+RLN IL+E TG V++I+ DT+RDNFMSA+ A+ Y L+DK+L R
Sbjct: 162 REILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLASR 214
>sp|Q13Z15|CLPP2_BURXL ATP-dependent Clp protease proteolytic subunit 2 OS=Burkholderia
xenovorans (strain LB400) GN=clpP2 PE=3 SV=1
Length = 217
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+GLAASMGAFLLA+G KGKRF+LPNSR+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYL++RLN +L+ TG V++I++DTDRDNFMS A Y L+D++ +R
Sbjct: 164 REILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQVAHKR 216
>sp|Q63V41|CLPP_BURPS ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
pseudomallei (strain K96243) GN=clpP PE=3 SV=1
Length = 217
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 164 REILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 216
>sp|A3NAI5|CLPP_BURP6 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
pseudomallei (strain 668) GN=clpP PE=3 SV=1
Length = 217
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 164 REILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 216
>sp|A3NWA6|CLPP_BURP0 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
pseudomallei (strain 1106a) GN=clpP PE=3 SV=1
Length = 217
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 164 REILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 216
>sp|A1V4X1|CLPP_BURMS ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
mallei (strain SAVP1) GN=clpP PE=3 SV=1
Length = 217
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 164 REILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 216
>sp|A2SBG3|CLPP_BURM9 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
mallei (strain NCTC 10229) GN=clpP PE=3 SV=1
Length = 217
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 164 REILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 216
>sp|A3MKJ8|CLPP_BURM7 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
mallei (strain NCTC 10247) GN=clpP PE=3 SV=1
Length = 217
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 104 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 163
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 164 REILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 216
>sp|Q3JRC9|CLPP_BURP1 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
pseudomallei (strain 1710b) GN=clpP PE=3 SV=1
Length = 207
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 94 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 153
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 154 REILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 206
>sp|Q62JK7|CLPP_BURMA ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
mallei (strain ATCC 23344) GN=clpP PE=3 SV=1
Length = 207
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 94 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 153
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYLR RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 154 REILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 206
>sp|Q2L256|CLPP_BORA1 ATP-dependent Clp protease proteolytic subunit OS=Bordetella avium
(strain 197N) GN=clpP PE=3 SV=2
Length = 201
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 83/114 (72%), Positives = 101/114 (88%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC GLAASMGAFLLA+G KGKRFSLPNSRIMIHQP GGAQGQASDI+IQA
Sbjct: 86 MQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFSLPNSRIMIHQPSGGAQGQASDIQIQA 145
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQRK 114
+EIL LR+RLN IL+E TG S+++I+ DT+RD FMSA+ A+ Y L+DK+L +R+
Sbjct: 146 KEILDLRERLNRILAENTGQSMERIAIDTERDTFMSAEDALSYGLVDKVLARRE 199
>sp|Q2SWQ6|CLPP_BURTA ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=clpP PE=3 SV=1
Length = 207
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 80/113 (70%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+GLAASMGAFLLASG KGKR++LPN+R+MIHQPLGGA+GQASDIEIQA
Sbjct: 94 MQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQA 153
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYL+ RLN +L+ TG V++I++DTDRDNFMS++ A Y LID + +R
Sbjct: 154 REILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHVSTKR 206
>sp|Q5KVD9|CLPP_GEOKA ATP-dependent Clp protease proteolytic subunit OS=Geobacillus
kaustophilus (strain HTA426) GN=clpP PE=3 SV=1
Length = 196
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 98/112 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VST+CIG+AASMGAFLLA+G KGKRF+LPNS IMIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112
+ IL+LR +LN ILSE TG ++ I +DTDRDNFM+A+ AMEY +ID++L +
Sbjct: 141 KRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYGIIDRVLTR 192
>sp|A2SFB5|CLPP_METPP ATP-dependent Clp protease proteolytic subunit OS=Methylibium
petroleiphilum (strain PM1) GN=clpP PE=3 SV=1
Length = 202
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 98/113 (86%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLC+G+AASMGAFLLA+G KGKRF+LPNSR+MIHQP GGAQGQA+DIEIQA
Sbjct: 89 MQFIKPDVSTLCMGIAASMGAFLLAAGAKGKRFALPNSRVMIHQPSGGAQGQATDIEIQA 148
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REIL LR+ LN IL+E+TG ++KI D++RD FMSA+ A Y LIDK++ QR
Sbjct: 149 REILKLRESLNGILAERTGQPLEKIRADSERDYFMSAEEATGYGLIDKVIAQR 201
>sp|B1Y6H3|CLPP_LEPCP ATP-dependent Clp protease proteolytic subunit OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=clpP
PE=3 SV=1
Length = 202
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 98/113 (86%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP VSTLC+GLAASMGAFLLA+G KGKRFSLPNS+IMIHQPLGGAQGQA+DIEI A
Sbjct: 89 MQFIKPQVSTLCMGLAASMGAFLLAAGAKGKRFSLPNSKIMIHQPLGGAQGQATDIEIHA 148
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REIL R++LN IL+E+TG S++KI DT+RD FMS++ A Y LID+++ +R
Sbjct: 149 REILKTREQLNRILAERTGQSLEKIQNDTERDYFMSSEEAQTYGLIDQVISKR 201
>sp|Q47XL8|CLPP_COLP3 ATP-dependent Clp protease proteolytic subunit OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=clpP PE=3
SV=1
Length = 220
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
M+FIKPN+ST+CIG AASMGAFLL+ G KGKR+ LPN+R+MIHQPLGG QGQASD EI A
Sbjct: 105 MKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASDFEIHA 164
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+EIL+++ +LN++++E TG ++ K+SQDTDRDNF+SA+ A+EY L+D IL+QR
Sbjct: 165 KEILFIKDKLNKLMAEHTGQTLDKVSQDTDRDNFLSAEAAVEYGLVDSILEQR 217
>sp|C5D7M9|CLPP_GEOSW ATP-dependent Clp protease proteolytic subunit OS=Geobacillus sp.
(strain WCH70) GN=clpP PE=3 SV=1
Length = 196
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 97/112 (86%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VST+CIG+AASMGAFLLA+G KGKRF+LPNS IMIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112
+ IL+LR +LN IL+E TG V+ I +DTDRDNFM+A+ A EY +ID++L +
Sbjct: 141 KRILFLRDKLNRILAENTGQPVEVIERDTDRDNFMTAQKAQEYGIIDRVLTR 192
>sp|Q9K709|CLPP1_BACHD ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=clpP1 PE=3 SV=1
Length = 194
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 98/114 (85%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQ+IKPNVST+CIG+AASMGAFLLA+G KGKRF+LPNS +MIHQPLGG +GQASDIEI
Sbjct: 81 MQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTRGQASDIEIHT 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQRK 114
R IL +R+ LN IL+E+TG +++I++DTDRDNFM+A+ A EY LIDK+++ K
Sbjct: 141 RRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYGLIDKVIETTK 194
>sp|A6Q1C1|CLPP_NITSB ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp.
(strain SB155-2) GN=clpP PE=3 SV=1
Length = 196
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/112 (71%), Positives = 102/112 (91%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
M +IKP+VST+CIG AASMGAFLL+SGTKGKR++LP++RIMIHQPLGGAQGQA+DIEIQA
Sbjct: 82 MNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGAQGQATDIEIQA 141
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112
+EIL L++ LNEIL+E TG SVKKI++DT+RD FMS++ A EY LID++L++
Sbjct: 142 KEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAKEYGLIDQVLEK 193
>sp|Q6HBD8|CLPP2_BACHK ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=clpP2
PE=3 SV=1
Length = 193
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP VST+CIG+AASMGAFLLA+G KGKR++LPNS +MIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+ IL+LR++LN+IL+++TG ++ + +DTDRDNFM+A+ A+EY LIDKI R
Sbjct: 141 KRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR 193
>sp|Q631K2|CLPP2_BACCZ ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus
(strain ZK / E33L) GN=clpP2 PE=3 SV=1
Length = 193
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP VST+CIG+AASMGAFLLA+G KGKR++LPNS +MIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+ IL+LR++LN+IL+++TG ++ + +DTDRDNFM+A+ A+EY LIDKI R
Sbjct: 141 KRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR 193
>sp|Q815J6|CLPP2_BACCR ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=clpP2 PE=3 SV=1
Length = 193
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP VST+CIG+AASMGAFLLA+G KGKR++LPNS +MIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+ IL+LR++LN+IL+++TG ++ + +DTDRDNFM+A+ A+EY LIDKI R
Sbjct: 141 KRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR 193
>sp|Q72XW9|CLPP2_BACC1 ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus
(strain ATCC 10987) GN=clpP2 PE=3 SV=1
Length = 193
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 99/113 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP VST+CIG+AASMGAFLLA+G KGKR++LPNS +MIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+ IL+LR++LN+IL+++TG ++ + +DTDRDNFM+A+ A+EY LIDKI R
Sbjct: 141 KRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR 193
>sp|B7GL34|CLPP_ANOFW ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus
flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1
Length = 196
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 96/112 (85%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VST+CIG+AASMGAFLLA+G KGKRF+LPNS IMIHQPLGG QGQA++IEI A
Sbjct: 81 MQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112
+ IL+LR +LN ILSE TG ++ I +DTDRDNFM+A+ A EY LID++L +
Sbjct: 141 KRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYGLIDRVLTR 192
>sp|Q2Y6J0|CLPP_NITMU ATP-dependent Clp protease proteolytic subunit OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=clpP
PE=3 SV=1
Length = 213
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 96/113 (84%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLCIG AASMG+ LLA+G KGKRF LPNSR+MIHQPLGG QGQASDIEI A
Sbjct: 96 MQFIKPDVSTLCIGQAASMGSLLLAAGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHA 155
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REILYL+ RLNE+LS+ TG S++ I +DTDRDNF+ A+ +++Y L+D +L R
Sbjct: 156 REILYLKNRLNELLSKHTGQSMETIERDTDRDNFLGAEDSVKYGLVDAVLTSR 208
>sp|A4ISQ2|CLPP_GEOTN ATP-dependent Clp protease proteolytic subunit OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=clpP PE=3 SV=1
Length = 196
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 97/112 (86%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VST+CIG+AASMGAFLLA+G KGKRF+LPNS +MIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112
+ IL+LR +LN IL+E TG ++ I +DTDRDNFM+A+ A EY +ID++L +
Sbjct: 141 KRILFLRDKLNRILAENTGQPIEVIERDTDRDNFMTAQKAQEYGIIDRVLTR 192
>sp|Q3SI98|CLPP_THIDA ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1
Length = 212
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 97/114 (85%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLCIG AASMGAFLL +G KGKR+ LPNSR+MIHQPLGG QGQASDIEI A
Sbjct: 95 MQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHA 154
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQRK 114
+EILYL+ RLN +L++ TG S++ I +DTDRDNFMSA+ +++Y L+DK+L R
Sbjct: 155 KEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAEDSVKYGLVDKVLTSRN 208
>sp|Q47FB6|CLPP_DECAR ATP-dependent Clp protease proteolytic subunit OS=Dechloromonas
aromatica (strain RCB) GN=clpP PE=3 SV=1
Length = 209
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 95/113 (84%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLCIG AASMGAFLL +G KGKRF+LPNSR+MIHQPLGG QGQASDI I A
Sbjct: 94 MQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGFQGQASDIAIHA 153
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+EIL +R RLN I++E +G +++I +DTDRDNF+SA A EY LIDK+L +R
Sbjct: 154 KEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAAEAAEYGLIDKVLTRR 206
>sp|Q1H1G0|CLPP_METFK ATP-dependent Clp protease proteolytic subunit OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=clpP
PE=3 SV=1
Length = 213
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 96/113 (84%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQF+KP+VSTLC+G AASMGA LLA+G +GKRF LPNSR+MIHQPLGG QGQASDIEI A
Sbjct: 97 MQFVKPDVSTLCVGQAASMGALLLAAGAQGKRFCLPNSRVMIHQPLGGFQGQASDIEIHA 156
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+EIL+LR++LN IL+ TG V+KI+ DTDRDNFMSA+ ++ Y ++DK++ R
Sbjct: 157 KEILFLREKLNHILASHTGQPVEKIALDTDRDNFMSAEQSVAYGIVDKVIASR 209
>sp|Q13UT1|CLPP1_BURXL ATP-dependent Clp protease proteolytic subunit 1 OS=Burkholderia
xenovorans (strain LB400) GN=clpP1 PE=3 SV=1
Length = 215
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 97/113 (85%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP VSTLC G AASMG FLL +G +GKR++LPN+RIMIHQP GG+QG A+D+EIQA
Sbjct: 91 MQFIKPEVSTLCTGFAASMGTFLLTAGQRGKRYALPNARIMIHQPSGGSQGTAADVEIQA 150
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+E+LYLR+RLN +++E+TG S+++I++DTDRDNFMSA A Y L+D++L+ R
Sbjct: 151 KEVLYLRERLNAMMAERTGRSIEEIARDTDRDNFMSAHAAKTYGLVDEVLETR 203
>sp|Q5P161|CLPP_AROAE ATP-dependent Clp protease proteolytic subunit OS=Aromatoleum
aromaticum (strain EbN1) GN=clpP PE=3 SV=1
Length = 212
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 96/113 (84%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP+VSTLCIG AASMG+FLLA+G KGKRF LPNSR+MIHQPLGG QGQASDIEI A
Sbjct: 97 MQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHA 156
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
REIL +R +LNE+L++ TG +++I +DTDRD FMSA A+EY ++DK+L R
Sbjct: 157 REILGIRAKLNEMLAKHTGQPIEQIEKDTDRDRFMSAADAVEYGIVDKVLTNR 209
>sp|Q8ENM5|CLPP_OCEIH ATP-dependent Clp protease proteolytic subunit OS=Oceanobacillus
iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /
HTE831) GN=clpP PE=3 SV=1
Length = 193
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 98/113 (86%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
M FIKPNVST+CIG+AASMGAFLL +G KGKRF+LPNS IMIHQPLGG QGQA+DIEI A
Sbjct: 81 MNFIKPNVSTICIGMAASMGAFLLTAGEKGKRFALPNSEIMIHQPLGGTQGQATDIEIHA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+ I+ +++R+NEI++EKTG ++ I +DT+RDNFM+A ++EY LIDKIL+++
Sbjct: 141 KRIIDIKRRMNEIMAEKTGQPIEVIERDTERDNFMTADQSVEYGLIDKILERK 193
>sp|Q81X63|CLPP2_BACAN ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus
anthracis GN=clpP2 PE=3 SV=1
Length = 193
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 98/113 (86%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP VST+CIG+AASMGAFLLA+G KGKR++LPNS MIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEAMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113
+ IL+LR++LN+IL+++TG ++ + +DTDRDNFM+A+ A+EY LIDKI R
Sbjct: 141 KRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR 193
>sp|Q82Y57|CLPP_NITEU ATP-dependent Clp protease proteolytic subunit OS=Nitrosomonas
europaea (strain ATCC 19718 / NBRC 14298) GN=clpP PE=3
SV=1
Length = 214
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 96/114 (84%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
+QFIKP+VSTLC+G AASMGAFLL +G KGKR+ LPNSR+MIHQPLGG QGQASDIEI A
Sbjct: 97 IQFIKPDVSTLCVGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHA 156
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQRK 114
+EIL L+ RLNEI+++ TG +VK I +DTDRDNF+ A+ A++Y L+D +L R+
Sbjct: 157 KEILALKSRLNEIMAKHTGQTVKAIERDTDRDNFLGAEAAVKYGLVDAVLTSRE 210
>sp|P80244|CLPP_BACSU ATP-dependent Clp protease proteolytic subunit OS=Bacillus subtilis
(strain 168) GN=clpP PE=1 SV=3
Length = 197
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 96/110 (87%)
Query: 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQA 60
MQFIKP VST+CIG+AASMGAFLLA+G KGKR++LPNS +MIHQPLGGAQGQA++IEI A
Sbjct: 81 MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAA 140
Query: 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKIL 110
+ IL LR +LN++L+E+TG ++ I +DTDRDNF SA+ A+EY LIDKIL
Sbjct: 141 KRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,759,044
Number of Sequences: 539616
Number of extensions: 1251329
Number of successful extensions: 4276
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3314
Number of HSP's gapped (non-prelim): 774
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)