Query psy5228
Match_columns 114
No_of_seqs 120 out of 1142
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 20:57:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5228.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5228hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gm2_A ATP-dependent CLP prote 100.0 7.7E-43 2.6E-47 253.2 11.0 113 1-113 92-205 (205)
2 3p2l_A ATP-dependent CLP prote 100.0 1.3E-37 4.5E-42 225.2 11.1 114 1-114 84-197 (201)
3 3qwd_A ATP-dependent CLP prote 100.0 1.4E-37 4.7E-42 225.4 10.5 114 1-114 81-194 (203)
4 1tg6_A Putative ATP-dependent 100.0 4.2E-34 1.4E-38 215.2 13.1 113 1-113 136-248 (277)
5 1yg6_A ATP-dependent CLP prote 100.0 2.1E-33 7.3E-38 201.4 11.0 114 1-114 80-193 (193)
6 2f6i_A ATP-dependent CLP prote 100.0 2E-33 6.8E-38 205.0 10.5 113 1-113 92-204 (215)
7 2cby_A ATP-dependent CLP prote 100.0 1E-31 3.6E-36 194.7 10.4 113 1-113 81-193 (208)
8 1y7o_A ATP-dependent CLP prote 100.0 2.1E-31 7.3E-36 194.4 9.8 113 1-113 99-213 (218)
9 3viv_A 441AA long hypothetical 99.9 1.8E-22 6.1E-27 148.4 6.6 107 1-112 63-174 (230)
10 3bf0_A Protease 4; bacterial, 99.6 1.2E-14 3.9E-19 118.7 10.7 104 5-111 120-262 (593)
11 3rst_A Signal peptide peptidas 99.4 2.1E-12 7.3E-17 94.7 12.3 105 4-111 78-212 (240)
12 3bf0_A Protease 4; bacterial, 99.3 2E-11 6.8E-16 99.6 10.9 105 4-111 370-503 (593)
13 3r6h_A Enoyl-COA hydratase, EC 98.3 1.3E-06 4.5E-11 63.4 7.4 90 3-112 93-183 (233)
14 1mj3_A Enoyl-COA hydratase, mi 98.3 1.4E-06 4.7E-11 64.2 7.2 90 2-113 94-186 (260)
15 3ot6_A Enoyl-COA hydratase/iso 98.3 2E-06 7E-11 62.3 7.9 91 3-113 92-184 (232)
16 1uiy_A Enoyl-COA hydratase; ly 98.3 9.9E-07 3.4E-11 64.6 6.2 91 3-113 92-182 (253)
17 2ej5_A Enoyl-COA hydratase sub 98.3 1.2E-06 4.2E-11 64.3 6.3 88 3-112 92-182 (257)
18 2pbp_A Enoyl-COA hydratase sub 98.3 1.6E-06 5.4E-11 63.7 6.7 88 3-112 93-183 (258)
19 1hzd_A AUH, AU-binding protein 98.3 1.2E-06 4E-11 65.0 6.0 90 2-113 102-194 (272)
20 3kqf_A Enoyl-COA hydratase/iso 98.3 1.1E-06 3.8E-11 64.9 5.6 89 2-112 99-190 (265)
21 3lao_A Enoyl-COA hydratase/iso 98.3 4.1E-06 1.4E-10 61.5 8.6 90 2-113 102-194 (258)
22 3g64_A Putative enoyl-COA hydr 98.3 1.3E-06 4.6E-11 64.8 6.0 89 3-113 111-203 (279)
23 3pea_A Enoyl-COA hydratase/iso 98.3 1.2E-06 4.1E-11 64.6 5.6 89 2-112 95-186 (261)
24 2a7k_A CARB; crotonase, antibi 98.3 1.9E-06 6.7E-11 62.9 6.6 90 3-112 92-181 (250)
25 1dci_A Dienoyl-COA isomerase; 98.3 1E-06 3.5E-11 65.3 5.0 89 3-112 105-196 (275)
26 2f6q_A Peroxisomal 3,2-trans-e 98.3 3.7E-06 1.3E-10 62.6 8.1 89 3-113 119-210 (280)
27 3p5m_A Enoyl-COA hydratase/iso 98.3 1.8E-06 6.2E-11 63.4 6.3 89 3-113 90-181 (255)
28 3isa_A Putative enoyl-COA hydr 98.2 2.7E-06 9.1E-11 62.5 7.1 88 3-112 96-183 (254)
29 1sg4_A 3,2-trans-enoyl-COA iso 98.2 1.8E-06 6.2E-11 63.5 6.2 91 3-112 95-187 (260)
30 3hrx_A Probable enoyl-COA hydr 98.2 2.4E-06 8.2E-11 62.5 6.8 90 2-113 88-180 (254)
31 3swx_A Probable enoyl-COA hydr 98.2 6E-06 2E-10 60.9 9.0 90 2-113 99-191 (265)
32 4f47_A Enoyl-COA hydratase ECH 98.2 3.6E-06 1.2E-10 62.5 7.7 89 3-113 113-204 (278)
33 3qmj_A Enoyl-COA hydratase, EC 98.2 2.4E-06 8.2E-11 62.7 6.6 88 3-112 97-187 (256)
34 2gtr_A CDY-like, chromodomain 98.2 2.5E-06 8.5E-11 62.8 6.7 88 3-112 99-189 (261)
35 2uzf_A Naphthoate synthase; ly 98.2 2.9E-06 9.9E-11 62.9 6.9 88 3-112 105-195 (273)
36 3fdu_A Putative enoyl-COA hydr 98.2 3.2E-06 1.1E-10 62.5 7.1 87 3-111 97-186 (266)
37 3rsi_A Putative enoyl-COA hydr 98.2 4.1E-06 1.4E-10 61.7 7.5 89 3-113 100-191 (265)
38 3gow_A PAAG, probable enoyl-CO 98.2 3.1E-06 1.1E-10 62.1 6.8 88 3-112 89-179 (254)
39 3l3s_A Enoyl-COA hydratase/iso 98.2 2.4E-06 8.1E-11 63.1 6.2 90 3-112 102-191 (263)
40 2vx2_A Enoyl-COA hydratase dom 98.2 2.1E-06 7.1E-11 64.2 5.9 90 3-112 124-213 (287)
41 2fbm_A Y chromosome chromodoma 98.2 3.1E-06 1.1E-10 63.4 6.8 88 3-112 117-207 (291)
42 3hin_A Putative 3-hydroxybutyr 98.2 3.3E-06 1.1E-10 62.8 6.9 89 3-113 104-195 (275)
43 3qxz_A Enoyl-COA hydratase/iso 98.2 3.6E-06 1.2E-10 62.2 6.9 89 2-112 95-186 (265)
44 4di1_A Enoyl-COA hydratase ECH 98.2 2.8E-06 9.5E-11 63.3 6.2 88 3-112 113-203 (277)
45 3h81_A Enoyl-COA hydratase ECH 98.2 2.7E-06 9.4E-11 63.4 6.2 88 3-112 113-203 (278)
46 4fzw_A 2,3-dehydroadipyl-COA h 98.2 3.6E-06 1.2E-10 62.0 6.7 89 3-113 93-184 (258)
47 3pe8_A Enoyl-COA hydratase; em 98.2 1.8E-06 6.2E-11 63.6 5.1 89 2-112 89-180 (256)
48 3trr_A Probable enoyl-COA hydr 98.2 6.2E-06 2.1E-10 60.6 8.0 88 4-113 92-182 (256)
49 2j5i_A P-hydroxycinnamoyl COA 98.2 4E-06 1.4E-10 62.2 6.7 89 2-112 103-194 (276)
50 4fzw_C 1,2-epoxyphenylacetyl-C 98.2 4.6E-06 1.6E-10 61.9 7.0 89 3-113 109-200 (274)
51 3qre_A Enoyl-COA hydratase, EC 98.2 3.1E-06 1.1E-10 63.7 6.1 89 2-112 127-218 (298)
52 3moy_A Probable enoyl-COA hydr 98.2 2.9E-06 9.9E-11 62.6 5.8 89 2-112 97-188 (263)
53 2ppy_A Enoyl-COA hydratase; be 98.2 2.2E-06 7.6E-11 63.2 5.1 88 3-112 99-190 (265)
54 3lke_A Enoyl-COA hydratase; ny 98.2 1.5E-06 5.2E-11 64.1 4.1 87 3-111 99-188 (263)
55 3i47_A Enoyl COA hydratase/iso 98.1 3.7E-06 1.3E-10 62.3 6.1 88 3-112 97-186 (268)
56 3r9t_A ECHA1_1; ssgcid, seattl 98.1 7.8E-06 2.7E-10 60.4 7.6 89 3-113 99-190 (267)
57 1wz8_A Enoyl-COA hydratase; ly 98.1 2.1E-06 7.3E-11 63.3 4.6 88 3-112 102-192 (264)
58 3myb_A Enoyl-COA hydratase; ss 98.1 3.7E-06 1.3E-10 62.8 5.9 90 3-112 117-206 (286)
59 3r9q_A Enoyl-COA hydratase/iso 98.1 5.5E-06 1.9E-10 61.2 6.7 89 3-113 99-190 (262)
60 3qxi_A Enoyl-COA hydratase ECH 98.1 8.2E-06 2.8E-10 60.3 7.6 87 5-113 102-191 (265)
61 3sll_A Probable enoyl-COA hydr 98.1 4.7E-06 1.6E-10 62.3 6.4 88 3-112 121-212 (290)
62 3qk8_A Enoyl-COA hydratase ECH 98.1 2.3E-06 7.9E-11 63.5 4.5 88 3-112 105-195 (272)
63 2q35_A CURF; crotonase, lyase; 98.1 3.5E-06 1.2E-10 61.5 5.3 88 3-112 88-178 (243)
64 3tlf_A Enoyl-COA hydratase/iso 98.1 3.8E-06 1.3E-10 62.2 5.4 91 2-112 107-199 (274)
65 1pjh_A Enoyl-COA isomerase; EC 98.1 5.4E-06 1.8E-10 61.6 6.1 88 3-112 110-201 (280)
66 3he2_A Enoyl-COA hydratase ECH 98.1 6.2E-06 2.1E-10 61.1 6.1 90 3-111 105-194 (264)
67 3njd_A Enoyl-COA hydratase; ss 98.1 5.2E-06 1.8E-10 63.3 5.7 87 3-112 155-242 (333)
68 4eml_A Naphthoate synthase; 1, 98.1 2.4E-06 8.3E-11 63.5 3.7 88 3-112 107-197 (275)
69 3t8b_A 1,4-dihydroxy-2-naphtho 98.1 8.3E-06 2.8E-10 62.4 6.8 88 3-112 165-256 (334)
70 1ef8_A Methylmalonyl COA decar 98.1 3.7E-06 1.3E-10 61.8 4.5 91 3-112 94-184 (261)
71 3hp0_A Putative polyketide bio 98.0 5E-06 1.7E-10 61.6 5.1 88 3-112 98-187 (267)
72 1nzy_A Dehalogenase, 4-chlorob 98.0 3.9E-06 1.3E-10 62.0 4.4 88 3-112 98-188 (269)
73 3m6n_A RPFF protein; enoyl-COA 98.0 9.7E-06 3.3E-10 61.1 6.4 88 4-113 139-229 (305)
74 3gkb_A Putative enoyl-COA hydr 98.0 7.8E-06 2.7E-10 61.2 5.7 88 3-112 104-195 (287)
75 1szo_A 6-oxocamphor hydrolase; 98.0 1E-05 3.4E-10 59.6 6.0 87 3-112 106-196 (257)
76 3t89_A 1,4-dihydroxy-2-naphtho 98.0 6.7E-06 2.3E-10 61.5 5.1 87 3-112 121-211 (289)
77 3bpt_A 3-hydroxyisobutyryl-COA 98.0 8.5E-06 2.9E-10 62.8 5.3 87 3-112 100-189 (363)
78 2f9y_A Acetyl-COA carboxylase, 98.0 7E-06 2.4E-10 63.1 4.7 81 3-112 210-290 (339)
79 3h0u_A Putative enoyl-COA hydr 98.0 7.1E-06 2.4E-10 61.4 4.5 89 2-112 100-192 (289)
80 2f9i_A Acetyl-coenzyme A carbo 98.0 9.4E-06 3.2E-10 62.1 5.2 80 3-111 196-275 (327)
81 3rrv_A Enoyl-COA hydratase/iso 97.9 7E-06 2.4E-10 61.0 4.2 86 3-110 120-208 (276)
82 3oc7_A Enoyl-COA hydratase; se 97.9 9.5E-06 3.2E-10 59.8 4.8 84 3-109 106-192 (267)
83 4hdt_A 3-hydroxyisobutyryl-COA 97.9 1.4E-05 4.6E-10 61.5 5.5 88 3-113 103-193 (353)
84 3t3w_A Enoyl-COA hydratase; ss 97.9 4.9E-06 1.7E-10 61.9 2.5 89 3-112 115-203 (279)
85 2np9_A DPGC; protein inhibitor 97.8 1.9E-05 6.5E-10 62.6 5.4 89 3-112 282-371 (440)
86 3ju1_A Enoyl-COA hydratase/iso 97.8 1.7E-05 5.7E-10 62.2 3.7 87 3-112 140-229 (407)
87 2wtb_A MFP2, fatty acid multif 97.7 7.3E-05 2.5E-09 62.2 7.3 89 2-112 99-190 (725)
88 2j5g_A ALR4455 protein; enzyme 97.7 1.8E-05 6E-10 58.5 3.2 87 3-112 115-205 (263)
89 1wdk_A Fatty oxidation complex 97.7 4.9E-05 1.7E-09 63.2 6.1 89 2-112 100-191 (715)
90 2w3p_A Benzoyl-COA-dihydrodiol 97.5 0.00011 3.9E-09 59.6 5.7 91 2-112 126-222 (556)
91 3zwc_A Peroxisomal bifunctiona 97.5 0.00021 7.1E-09 59.8 6.7 88 3-112 104-194 (742)
92 2bzr_A Propionyl-COA carboxyla 97.1 0.00072 2.5E-08 54.9 5.7 92 4-113 419-518 (548)
93 1vrg_A Propionyl-COA carboxyla 96.9 0.00084 2.9E-08 54.2 4.4 91 4-113 402-497 (527)
94 1on3_A Methylmalonyl-COA carbo 96.8 0.00083 2.8E-08 54.2 3.8 91 4-113 398-493 (523)
95 2f9y_B Acetyl-coenzyme A carbo 96.6 0.002 7E-08 48.6 4.4 72 5-112 191-263 (304)
96 1pix_A Glutaconyl-COA decarbox 96.3 0.0059 2E-07 49.9 5.9 91 4-113 443-546 (587)
97 3iav_A Propionyl-COA carboxyla 96.1 0.0012 4E-08 53.5 0.4 91 4-113 404-500 (530)
98 3n6r_B Propionyl-COA carboxyla 95.1 0.012 4.1E-07 47.6 3.1 85 4-113 410-501 (531)
99 1x0u_A Hypothetical methylmalo 95.1 0.00072 2.5E-08 54.6 -4.1 89 4-113 397-492 (522)
100 3u9r_B MCC beta, methylcrotony 95.1 0.023 7.7E-07 46.2 4.5 41 4-46 424-468 (555)
101 3gf3_A Glutaconyl-COA decarbox 94.2 0.05 1.7E-06 44.5 4.6 97 4-113 445-548 (588)
102 2f9i_B Acetyl-coenzyme A carbo 90.5 0.22 7.4E-06 37.1 3.5 73 5-113 194-267 (285)
103 2x24_A Acetyl-COA carboxylase; 81.7 1.6 5.4E-05 36.9 4.5 43 4-47 520-568 (793)
104 2i6e_A Hypothetical protein; N 76.1 4.6 0.00016 29.6 5.1 55 56-111 223-288 (301)
105 2nxo_A Hypothetical protein SC 65.3 6.1 0.00021 28.3 3.6 47 64-110 219-276 (291)
106 3ksx_A Nitrate transport prote 64.4 22 0.00074 25.4 6.5 48 63-110 242-304 (324)
107 2k9q_A Uncharacterized protein 55.6 21 0.00073 19.9 4.2 32 70-101 17-48 (77)
108 1y7y_A C.AHDI; helix-turn-heli 53.5 25 0.00086 19.0 4.5 31 71-101 29-59 (74)
109 3b7h_A Prophage LP1 protein 11 53.1 25 0.00087 19.3 4.3 46 56-101 8-54 (78)
110 1adr_A P22 C2 repressor; trans 52.3 27 0.00092 19.0 4.4 32 70-101 20-51 (76)
111 3kz3_A Repressor protein CI; f 52.2 30 0.001 19.5 4.9 31 71-101 28-58 (80)
112 3f6w_A XRE-family like protein 51.0 31 0.0011 19.3 4.7 32 70-101 29-60 (83)
113 2r1j_L Repressor protein C2; p 51.0 26 0.0009 18.5 4.4 31 71-101 21-51 (68)
114 2wiu_B HTH-type transcriptiona 50.6 24 0.00082 20.0 4.0 48 54-101 11-58 (88)
115 3k8x_A Acetyl-COA carboxylase; 46.5 6.3 0.00021 33.2 1.1 43 4-47 506-554 (758)
116 2b5a_A C.BCLI; helix-turn-heli 45.6 36 0.0012 18.6 4.5 31 71-101 26-56 (77)
117 3s8q_A R-M controller protein; 44.8 40 0.0014 18.8 4.5 32 70-101 26-57 (82)
118 2x24_A Acetyl-COA carboxylase; 44.3 12 0.00039 31.8 2.3 40 5-46 259-298 (793)
119 3g5g_A Regulatory protein; tra 43.8 44 0.0015 20.0 4.5 43 59-101 29-74 (99)
120 2ict_A Antitoxin HIGA; helix-t 43.2 38 0.0013 19.6 4.1 31 71-101 24-54 (94)
121 3v7d_A Suppressor of kinetocho 42.1 59 0.002 21.7 5.4 31 70-100 125-156 (169)
122 1b0n_B Protein (SINI protein); 41.9 16 0.00055 20.6 2.0 16 75-90 22-37 (57)
123 2x26_A Periplasmic aliphatic s 40.8 78 0.0027 22.0 6.1 43 68-110 221-278 (308)
124 2ewt_A BLDD, putative DNA-bind 40.7 42 0.0015 18.0 4.1 31 71-101 24-56 (71)
125 1lmb_3 Protein (lambda repress 40.6 50 0.0017 18.8 4.9 30 71-100 33-62 (92)
126 3mn2_A Probable ARAC family tr 39.1 58 0.002 19.3 4.6 52 56-107 21-83 (108)
127 3omt_A Uncharacterized protein 37.2 49 0.0017 18.0 3.8 31 71-101 24-54 (73)
128 3zyy_X Iron-sulfur cluster bin 36.7 36 0.0012 28.0 4.1 51 60-110 507-563 (631)
129 3vk0_A NHTF, transcriptional r 35.9 59 0.002 19.6 4.3 46 56-101 22-67 (114)
130 2xi8_A Putative transcription 35.4 42 0.0014 17.5 3.2 31 71-101 17-47 (66)
131 1b8z_A Protein (histonelike pr 35.0 37 0.0013 20.0 3.1 24 67-90 3-26 (90)
132 2a6c_A Helix-turn-helix motif; 34.2 58 0.002 18.4 3.8 46 55-100 18-64 (83)
133 2ast_A S-phase kinase-associat 34.1 62 0.0021 21.1 4.4 47 53-99 99-148 (159)
134 1y9q_A Transcriptional regulat 33.9 57 0.0019 21.5 4.2 31 70-100 26-56 (192)
135 3cec_A Putative antidote prote 33.8 72 0.0025 18.7 4.4 32 70-101 33-64 (104)
136 1mul_A NS2, HU-2, DNA binding 33.6 42 0.0014 19.8 3.2 23 68-90 4-26 (90)
137 2kpj_A SOS-response transcript 33.5 37 0.0013 19.7 2.9 30 71-100 25-54 (94)
138 1p71_A DNA-binding protein HU; 32.4 43 0.0015 20.0 3.1 24 67-90 3-26 (94)
139 1dw9_A Cyanate lyase; cyanate 32.0 37 0.0013 22.9 2.9 34 70-103 28-61 (156)
140 1vrg_A Propionyl-COA carboxyla 31.9 20 0.00069 28.7 1.8 40 5-46 170-210 (527)
141 3bs3_A Putative DNA-binding pr 31.1 53 0.0018 17.8 3.2 31 71-101 26-56 (76)
142 2o97_B NS1, HU-1, DNA-binding 30.5 43 0.0015 19.8 2.8 24 67-90 3-26 (90)
143 1x57_A Endothelial differentia 30.2 54 0.0018 18.7 3.2 45 56-100 14-58 (91)
144 3c4i_A DNA-binding protein HU 29.7 51 0.0017 19.9 3.1 24 67-90 3-26 (99)
145 1lm5_A Subdomain of desmoplaki 29.4 19 0.00065 25.4 1.2 18 91-108 57-74 (214)
146 2p1m_A SKP1-like protein 1A; F 28.8 36 0.0012 22.5 2.4 45 55-99 100-147 (160)
147 1owf_A IHF-alpha, integration 28.7 55 0.0019 19.7 3.1 24 67-90 5-28 (99)
148 3f52_A CLP gene regulator (CLG 27.8 1E+02 0.0035 18.4 4.9 46 55-100 28-73 (117)
149 2ef8_A C.ECOT38IS, putative tr 27.5 82 0.0028 17.3 4.3 28 71-98 26-53 (84)
150 3rhi_A DNA-binding protein HU; 27.1 38 0.0013 20.2 2.2 24 67-90 6-29 (93)
151 3eus_A DNA-binding protein; st 25.7 98 0.0034 17.5 4.3 45 56-100 15-59 (86)
152 3op9_A PLI0006 protein; struct 25.4 1E+02 0.0035 18.3 4.0 41 60-100 14-54 (114)
153 2ki8_A Tungsten formylmethanof 24.6 28 0.00095 22.8 1.2 17 91-107 53-69 (146)
154 2x7q_A Ca3427, possible thiami 24.5 1.6E+02 0.0054 20.8 5.5 29 67-95 237-265 (321)
155 2zp2_A Kinase A inhibitor; KIP 23.8 81 0.0028 20.8 3.4 24 72-95 18-41 (141)
156 3sj5_A Methyl-accepting chemot 23.7 93 0.0032 21.1 3.9 26 67-92 48-73 (188)
157 1ybz_A Chorismate mutase; cons 23.7 1.1E+02 0.0038 18.3 3.9 37 50-86 13-49 (91)
158 1k8v_A Neuropeptide F; moniezi 23.5 53 0.0018 17.1 1.9 25 43-67 7-31 (40)
159 3v2l_A AGAP005208-PA; odorant 23.3 1.3E+02 0.0043 18.0 4.8 32 61-92 4-35 (120)
160 2czl_A Hypothetical protein TT 23.2 70 0.0024 21.9 3.2 44 68-111 209-268 (272)
161 2bnm_A Epoxidase; oxidoreducta 23.1 1.2E+02 0.0042 19.8 4.4 45 56-100 11-56 (198)
162 3trb_A Virulence-associated pr 23.0 87 0.003 18.9 3.3 32 71-102 30-61 (104)
163 2l49_A C protein; P2 bacteriop 22.9 72 0.0025 18.4 2.9 30 71-100 20-49 (99)
164 3ivp_A Putative transposon-rel 22.7 1.2E+02 0.004 18.5 3.9 46 55-100 12-57 (126)
165 3k8x_A Acetyl-COA carboxylase; 22.6 51 0.0017 27.8 2.7 40 5-46 246-285 (758)
166 1owf_B IHF-beta, integration H 22.6 83 0.0028 18.6 3.1 23 68-90 4-27 (94)
167 3oox_A Putative 2OG-Fe(II) oxy 22.4 1.2E+02 0.0042 21.9 4.5 39 53-91 128-166 (312)
168 3tfg_A ALR2278 protein; heme-b 22.4 1E+02 0.0035 20.8 3.9 27 67-93 48-74 (189)
169 3abf_A 4-oxalocrotonate tautom 22.2 72 0.0025 16.9 2.6 25 63-87 17-41 (64)
170 3rmi_A Chorismate mutase prote 22.2 1.4E+02 0.0049 18.6 4.3 32 54-85 12-43 (114)
171 1otf_A 4-oxalocrotonate tautom 22.0 71 0.0024 16.7 2.5 33 62-94 15-50 (62)
172 2x4k_A 4-oxalocrotonate tautom 22.0 79 0.0027 16.4 2.7 33 63-95 19-54 (63)
173 2opa_A Probable tautomerase YW 22.0 79 0.0027 16.5 2.7 26 62-87 15-40 (61)
174 3t76_A VANU, transcriptional r 21.8 1.1E+02 0.0039 17.9 3.6 38 63-101 32-69 (88)
175 2o38_A Hypothetical protein; a 21.8 1.4E+02 0.0047 18.5 4.2 30 71-100 56-86 (120)
176 3gf3_A Glutaconyl-COA decarbox 21.4 87 0.003 25.5 3.8 40 5-46 182-221 (588)
177 3e21_A HFAF1, FAS-associated f 20.9 72 0.0025 16.8 2.2 28 67-94 5-33 (45)
178 1pix_A Glutaconyl-COA decarbox 20.1 80 0.0027 25.6 3.3 39 5-46 181-220 (587)
179 1on3_A Methylmalonyl-COA carbo 20.0 42 0.0014 26.8 1.6 39 6-46 168-206 (523)
No 1
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=100.00 E-value=7.7e-43 Score=253.16 Aligned_cols=113 Identities=36% Similarity=0.590 Sum_probs=109.9
Q ss_pred CcccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA-QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 1 m~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~-~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
|+++++||+|+|+|+|+|||++|+++|++|+|++.|||++|||||+++. .|+++|+++++++|+++++.+.++|+++||
T Consensus 92 m~~~~~~V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG 171 (205)
T 4gm2_A 92 INYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTE 171 (205)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCEEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6789999999999999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
++.|+|.++|++|+||||+||++|||||+|++++
T Consensus 172 ~~~e~I~~~m~rd~~msa~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 172 KDTNVISNVLERDKYFNADEAVDFKLIDHILEKE 205 (205)
T ss_dssp CCHHHHHHHTTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred CCHHHHHHHhcCCcccCHHHHHHcCCccEeecCC
Confidence 9999999999999999999999999999999864
No 2
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=100.00 E-value=1.3e-37 Score=225.20 Aligned_cols=114 Identities=63% Similarity=1.033 Sum_probs=110.4
Q ss_pred CcccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 1 m~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
|++++.||+|+|.|+|+|+|++|+++|++|+|++.|||++|||||+++..|+++|+++++++++++++.+.++|+++||+
T Consensus 84 i~~~~~~v~t~~~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~ 163 (201)
T 3p2l_A 84 MQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQ 163 (201)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCCeEEEEcCEehhHHHHHHHcCccCCEEEcCCCeEEEeccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccCC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQRK 114 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~~ 114 (114)
+.+++.++|++++||||+||++|||||+|+++++
T Consensus 164 ~~e~i~~~~~~~~~lta~EA~e~GliD~I~~~~~ 197 (201)
T 3p2l_A 164 DLETIVKDTDRDNFMMADEAKAYGLIDHVIESRE 197 (201)
T ss_dssp CHHHHHHHTSSCEEEEHHHHHHHTSCSEECCCSC
T ss_pred CHHHHHHHhhcCeeecHHHHHHcCCccEecCCHH
Confidence 9999999999999999999999999999998764
No 3
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=100.00 E-value=1.4e-37 Score=225.40 Aligned_cols=114 Identities=63% Similarity=1.036 Sum_probs=110.1
Q ss_pred CcccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 1 m~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
|++++.||+|+|.|+|+|+|++|+++|++|+|++.|||++|||||+++..|+++|+++++++++++++.+.++|+++||+
T Consensus 81 i~~~~~~V~t~~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~ 160 (203)
T 3qwd_A 81 IQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQ 160 (203)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCC
T ss_pred HHHhcCCcEEEEeeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccCC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQRK 114 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~~ 114 (114)
+.+++.++|++|+||||+||++|||||+|+++++
T Consensus 161 ~~e~i~~~~~~d~~lta~EA~e~GliD~I~~~~~ 194 (203)
T 3qwd_A 161 SIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPET 194 (203)
T ss_dssp CHHHHHHHHTSCCCEEHHHHHHHTSCSEECCCCC
T ss_pred CHHHHHHHhhcCceecHHHHHHcCCcCEecCCcc
Confidence 9999999999999999999999999999998753
No 4
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=100.00 E-value=4.2e-34 Score=215.20 Aligned_cols=113 Identities=51% Similarity=0.807 Sum_probs=109.7
Q ss_pred CcccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 1 m~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
|++++.||+|+|.|+|+|+|++|+++|++|+|++.|||++|+|||+++..|++.|++..+++++++++.+.++|+++||+
T Consensus 136 I~~~k~pV~t~v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~ 215 (277)
T 1tg6_A 136 MQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQ 215 (277)
T ss_dssp HHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCEEEEEccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
+.+++.+++++++|||++||++|||||+|++.+
T Consensus 216 ~~e~i~~~~drd~~lta~EAle~GLID~I~~~~ 248 (277)
T 1tg6_A 216 SLQVIESAMERDRYMSPMEAQEFGILDKVLVHP 248 (277)
T ss_dssp CHHHHHHHHSSCEEECHHHHHHHTSCSEECSSC
T ss_pred CHHHHHHHHhcCcccCHHHHHHCCCCCEecCcc
Confidence 999999999999999999999999999999865
No 5
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=100.00 E-value=2.1e-33 Score=201.43 Aligned_cols=114 Identities=65% Similarity=1.057 Sum_probs=109.0
Q ss_pred CcccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 1 m~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
|++++.||+|+|.|+|+|+|++|+++|++|+|++.|+|++|+|+|+++..|++.|++...+++++.++.+.++|++++|+
T Consensus 80 i~~~~~pV~~~v~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~ 159 (193)
T 1yg6_A 80 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 159 (193)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCEEEEEeeeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45678999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccCC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQRK 114 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~~ 114 (114)
+.+++.+++++++|||++||+++||||+|+++++
T Consensus 160 ~~~~i~~~~~~~~~~ta~eA~~~GliD~i~~~~~ 193 (193)
T 1yg6_A 160 SLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 193 (193)
T ss_dssp CHHHHHHHTSSCEEEEHHHHHHHTSSSEECCCC-
T ss_pred CHHHHHHHhcCCeEEcHHHHHHcCCCCEecCCCC
Confidence 9999999999999999999999999999998763
No 6
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=100.00 E-value=2e-33 Score=204.97 Aligned_cols=113 Identities=50% Similarity=0.821 Sum_probs=101.3
Q ss_pred CcccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 1 m~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
|++++.||+|+|.|+|+|+|++|+++|++|+|+|.|+|++|+|+|+++..|++.|+...++++.++++.+.++|+++||+
T Consensus 92 i~~~~~pV~t~v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~ 171 (215)
T 2f6i_A 92 FNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQ 171 (215)
T ss_dssp HHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCEEEEEeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 46788999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
+.+++.+++++++|||++||++|||||+|++.+
T Consensus 172 ~~e~i~~~~~~~~~lta~eA~e~GLiD~I~~~~ 204 (215)
T 2f6i_A 172 TVETIEKDSDRDYYMNALEAKQYGIIDEVIETK 204 (215)
T ss_dssp CHHHHHHHHHTTCEECHHHHHHHTSCSEECCCS
T ss_pred CHHHHHHHHhCCeecCHHHHHHCCCCCEecCCc
Confidence 999999999999999999999999999999865
No 7
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=99.97 E-value=1e-31 Score=194.74 Aligned_cols=113 Identities=43% Similarity=0.802 Sum_probs=99.1
Q ss_pred CcccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 1 m~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
|+.++.||+|+|.|+|+|+|++|+++|++++|++.|+|++|+|+|+++..|++.|++...++++++++.+.++|++++|+
T Consensus 81 i~~~~~pV~~~v~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~ 160 (208)
T 2cby_A 81 MVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQ 160 (208)
T ss_dssp HHHCSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCEEEEECcEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 35678999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
+.+++.+++++++|||++||+++||||+|++..
T Consensus 161 ~~~~i~~~~~~~~~~ta~eA~e~GLvD~i~~~~ 193 (208)
T 2cby_A 161 PIERIEADSDRDRWFTAAEALEYGFVDHIITRA 193 (208)
T ss_dssp CHHHHHHHHHTTCEEEHHHHHHHTSCSEECSCC
T ss_pred CHHHHHHHHhCCcEEcHHHHHHcCCCcEecCch
Confidence 999999999999999999999999999999764
No 8
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.97 E-value=2.1e-31 Score=194.44 Aligned_cols=113 Identities=47% Similarity=0.830 Sum_probs=97.8
Q ss_pred CcccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 1 MQFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA--QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 1 m~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~--~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
|++++.||+|+|.|.|+|+|++|+++|++|+|++.|+|++|+|+|+++. .|+++|++..++++++.++.+.++|++++
T Consensus 99 i~~~~~pV~t~v~G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~ 178 (218)
T 1y7o_A 99 MNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENS 178 (218)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEccEeHHHHHHHHHcCCcCcEEEcCCcEEEEecccccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678899999999999999999999999999999999999999999877 89999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
|++.+++.+++++++||||+||++|||||+|++.+
T Consensus 179 G~~~~~i~~~~~~~~~~ta~EA~e~GLVD~v~~~~ 213 (218)
T 1y7o_A 179 GQSMEKVHADAERDNWMSAQETLEYGFIDEIMANN 213 (218)
T ss_dssp TCCHHHHHHHHHSCCCBCHHHHHHHTSCSEECCCC
T ss_pred CCCHHHHHHHHhCCCEEcHHHHHHCCCCcEEcCcC
Confidence 99999999999999999999999999999999865
No 9
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.86 E-value=1.8e-22 Score=148.45 Aligned_cols=107 Identities=17% Similarity=0.207 Sum_probs=89.8
Q ss_pred CcccCCCeEEEE---ehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCc--cCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy5228 1 MQFIKPNVSTLC---IGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLG--GAQGQASDIEIQAREILYLRQRLNEILS 75 (114)
Q Consensus 1 m~~~~~~V~t~~---~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~--~~~G~~~~l~~~~~~l~~~~~~~~~~ya 75 (114)
|+.++.||.++| .|.|+|+|++|+++|+. |+|.|++++++|+|.. +..|+++++ ..+.+..++ .+.+.|+
T Consensus 63 i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~--~~a~p~a~ig~~~p~~~~~~~G~~~~~--~~k~~~~~~-~~~~~la 137 (230)
T 3viv_A 63 IQQSKIPVIIYVYPPGASAASAGTYIALGSHL--IAMAPGTSIGACRPILGYSQNGSIIEA--PPAITNYFI-AYIKSLA 137 (230)
T ss_dssp HHTCSSCEEEEECSTTCEEETHHHHHHHTSSE--EEECTTCEEECCCEEEEECTTSCEEEC--CHHHHHHHH-HHHHHHH
T ss_pred HHhCCCCEEEEEecCCCEEhHHHHHHHHhcCc--eeECCCCEEEeccceecCCCCCCchHH--HHHHHHHHH-HHHHHHH
Confidence 356789999999 99999999999999998 9999999999999984 456654322 123333344 3457899
Q ss_pred HHhCCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 76 EKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 76 ~~tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
+++|++.+.+++++++++|||++||+++||||+|++.
T Consensus 138 ~~~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~ 174 (230)
T 3viv_A 138 QESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARD 174 (230)
T ss_dssp HHTTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSS
T ss_pred HHhCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCC
Confidence 9999999999999999999999999999999999864
No 10
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.57 E-value=1.2e-14 Score=118.70 Aligned_cols=104 Identities=16% Similarity=0.107 Sum_probs=85.6
Q ss_pred CCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC------------------CC--------------C
Q psy5228 5 KPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA------------------QG--------------Q 52 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~------------------~G--------------~ 52 (114)
+.||++++. .++|.+.+|++++++ +++.|++.+++|+|.... .| +
T Consensus 120 gkpvva~~~-~aas~~y~lAsaad~--i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms 196 (593)
T 3bf0_A 120 GKPVYAVGE-NYSQGQYYLASFANK--IWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMS 196 (593)
T ss_dssp TCCEEEEES-CEEHHHHHHHTTSSE--EEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCC
T ss_pred CCeEEEEEc-cchhHHHHHHHhCCE--EEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCC
Confidence 368888864 478999999998877 999999999999998531 02 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcC-------CceecHHHHHHcCcceeecc
Q psy5228 53 ASDIEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDR-------DNFMSAKMAMEYCLIDKILK 111 (114)
Q Consensus 53 ~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~-------~~~lta~eA~~~GliD~Ii~ 111 (114)
..+-+...+.|+.+.+.+.+.+++++|++.+++.+++++ +.|||++||+++||||+|..
T Consensus 197 ~~~re~~~~~l~~~~~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~ 262 (593)
T 3bf0_A 197 PAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALAS 262 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCC
Confidence 122234456677888889999999999999999999998 99999999999999999985
No 11
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.43 E-value=2.1e-12 Score=94.74 Aligned_cols=105 Identities=16% Similarity=0.148 Sum_probs=86.8
Q ss_pred cCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecC---------------------CccC---CC------CH
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQP---------------------LGGA---QG------QA 53 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p---------------------~~~~---~G------~~ 53 (114)
++.||.+.+.|.|+|.|..|+++|+. |++.|++.+.++-+ ..+. .+ +.
T Consensus 78 ~~kPVia~v~g~a~~gG~~lA~a~D~--i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~ 155 (240)
T 3rst_A 78 TKKPIYVSMGSMAASGGYYISTAADK--IFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTK 155 (240)
T ss_dssp HCCCEEEEEEEEEETHHHHHHTTSSE--EEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCH
T ss_pred CCCeEEEEECCeehHhHHHHHHhCCe--eEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCH
Confidence 47899999999999999999999998 99999999999832 1111 11 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHHHHcCcceeecc
Q psy5228 54 SDIEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILK 111 (114)
Q Consensus 54 ~~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~ 111 (114)
.+-+.....++...+.+.+.+++..+++.+++.++++... ++++||+++||||+|..
T Consensus 156 ~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~~~~g~~-~~a~~A~~~GLVD~i~~ 212 (240)
T 3rst_A 156 EEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKKIADGRV-YDGRQAKKLNLVDELGF 212 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHCSSCE-EEHHHHHHTTSSSEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHhcCCc-ccHHHHHHcCCCcccCC
Confidence 4445556677888999999999999999999999777665 59999999999999975
No 12
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.29 E-value=2e-11 Score=99.64 Aligned_cols=105 Identities=13% Similarity=0.051 Sum_probs=84.2
Q ss_pred cCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCC------------ccC-----------------CCCHH
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPL------------GGA-----------------QGQAS 54 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~------------~~~-----------------~G~~~ 54 (114)
.+.||.+.+.|.|+|.|..|+++|+. |++.|++.+....+. .|. .++..
T Consensus 370 ~~kPVia~v~g~AasgG~~iA~aaD~--iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~ 447 (593)
T 3bf0_A 370 AGKPVVVSMGGMAASGGYWISTPANY--IVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPE 447 (593)
T ss_dssp TTCCEEEEEEEEEETHHHHTTTTCSE--EEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHH
T ss_pred CCCCEEEEECCChHHHHHHHHHhCCE--EEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHH
Confidence 46899999999999999999999998 999999998765321 110 12344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHHHHcCcceeecc
Q psy5228 55 DIEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILK 111 (114)
Q Consensus 55 ~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~ 111 (114)
+.+...+.++.....+.+.+++..|++.+.++.+++... +|++||+++||||+|.+
T Consensus 448 ~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~-~ta~eA~~~GLVD~v~~ 503 (593)
T 3bf0_A 448 AQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHV-WTGQDAKANGLVDSLGD 503 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCE-EEHHHHHHHTSCSEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCC-cCHHHHHHCCCCcCccC
Confidence 444555667777788899999999999999987777654 59999999999999975
No 13
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=98.35 E-value=1.3e-06 Score=63.38 Aligned_cols=90 Identities=24% Similarity=0.282 Sum_probs=66.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ-GQASDIEIQAREILYLRQRLNEILSEKTGHS 81 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~-G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s 81 (114)
.++.||.+.+-|.|.+.|.-++++||- |++.++++|.+-...-|.. +... . ..+.++.|
T Consensus 93 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~~~~~g-~---------------~~l~~~~g-- 152 (233)
T 3r6h_A 93 SYPKPVVIACTGHAIAMGAFLLCSGDH--RVAAHAYNVQANEVAIGMTIPYAA-M---------------EVLKLRLT-- 152 (233)
T ss_dssp TCSSCEEEEECSEEETHHHHHHTTSSE--EEECTTCCEECCGGGGTCCCCHHH-H---------------HHHHHHSC--
T ss_pred hCCCCEEEEECCcchHHHHHHHHhCCE--EEEeCCcEEECchhhhCCCCCccH-H---------------HHHHHHhC--
Confidence 568899999999999999999999998 9999999988766655542 2110 0 01122222
Q ss_pred HHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 82 VKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 82 ~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 153 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~ 183 (233)
T 3r6h_A 153 PSAYQQAAGLAKTFFGETALAAGFIDEISLP 183 (233)
T ss_dssp HHHHHHHHHSCCEECHHHHHHHTSCSEECCG
T ss_pred HHHHHHHHHcCCcCCHHHHHHcCCCcEeeCH
Confidence 2334455556678999999999999999875
No 14
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=98.33 E-value=1.4e-06 Score=64.18 Aligned_cols=90 Identities=19% Similarity=0.113 Sum_probs=66.1
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+.|.|.+.|.-|+++||. |++.++++|.+.....|. .|-..-+. +..
T Consensus 94 ~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~v 153 (260)
T 1mj3_A 94 TRIKKPVIAAVNGYALGGGCELAMMCDI--IYAGEKAQFGQPEILLGTIPGAGGTQRLT------------------RAV 153 (260)
T ss_dssp GGCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSTTTHHH------------------HHH
T ss_pred HhCCCCEEEEECCEEEeHHHHHHHhCCE--EEEcCCCEEeCcccccCCCCCccHHHHHH------------------HHh
Confidence 3568899999999999999999999998 999999999887766442 23222221 111
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
| ...-.+++-....++++||+++||||+|++..
T Consensus 154 G--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 186 (260)
T 1mj3_A 154 G--KSLAMEMVLTGDRISAQDAKQAGLVSKIFPVE 186 (260)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT
T ss_pred C--HHHHHHHHHcCCcCCHHHHHHcCCccEEeChH
Confidence 1 22334444455678999999999999998753
No 15
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=98.32 E-value=2e-06 Score=62.33 Aligned_cols=91 Identities=20% Similarity=0.248 Sum_probs=67.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCC-ceeeeecCCccCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPN-SRIMIHQPLGGAQ-GQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~-s~~miH~p~~~~~-G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
.++.||.+.+-|.|.+.|.-++++||- |++.++ ++|.+-...-|.. +... ...+..+.
T Consensus 92 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~~a~f~~pe~~~Gl~p~~~g----------------~~~l~~~i-- 151 (232)
T 3ot6_A 92 SHPFPIIVACPGHAVAKGAFLLLSADY--RIGVAGPFSIGLNEVQIGMTMHHAG----------------IELARDRL-- 151 (232)
T ss_dssp TCSSCEEEECCEEEETHHHHHHTTSSE--EEEECSSCCEECCTTTTTCCCCHHH----------------HHHHHHHS--
T ss_pred cCCCCEEEEECCEeehHHHHHHHHCCE--EEEeCCCcEEECcccccCCCCchhH----------------HHHHHHHh--
Confidence 468899999999999999999999998 999998 7888766554432 2100 01112222
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
....-.+++-....++++||+++||||+|++..
T Consensus 152 g~~~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~ 184 (232)
T 3ot6_A 152 RKSAFNRSVINAEMFDPEGAMAAGFLDKVVSVE 184 (232)
T ss_dssp CHHHHHHHHTSCCEECHHHHHHHTSCSEEECTT
T ss_pred CHHHHHHHHHcCCccCHHHHHHCCCCCEecCHH
Confidence 234455666677889999999999999998753
No 16
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=98.32 E-value=9.9e-07 Score=64.59 Aligned_cols=91 Identities=16% Similarity=0.058 Sum_probs=66.1
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|..- +.- ...+.+..| .
T Consensus 92 ~~~kPvIAav~G~a~GgG~~lal~cD~--~ia~~~a~f~~pe~~~Gl~p---~~g-------------~~~l~r~vG--~ 151 (253)
T 1uiy_A 92 TYPKPTVAAVNGPAVAGGAGLALACDL--VVMDEEARLGYTEVKIGFVA---ALV-------------SVILVRAVG--E 151 (253)
T ss_dssp HCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECCHHHHTCCC---HHH-------------HHHHHHHSC--H
T ss_pred hCCCCEEEEECCeeeHHHHHHHHhCCE--EEEcCCcEEeCcccccCcCC---chH-------------HHHHHHHhC--H
Confidence 468899999999999999999999998 99999999887555444321 110 001222222 3
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
..-.+++-....++++||+++||||+|++..
T Consensus 152 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 182 (253)
T 1uiy_A 152 KAAKDLLLTGRLVEAREAKALGLVNRIAPPG 182 (253)
T ss_dssp HHHHHHHHHCCEEEHHHHHHHTSCSEEECTT
T ss_pred HHHHHHHHhCCccCHHHHHHCCCcceecChh
Confidence 4445555566789999999999999998653
No 17
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=98.30 E-value=1.2e-06 Score=64.31 Aligned_cols=88 Identities=17% Similarity=0.077 Sum_probs=65.2
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|...-+. +..|
T Consensus 92 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------~~vG 151 (257)
T 2ej5_A 92 HLEKPVVAAVNGAAAGAGMSLALACDF--RLLSEKASFAPAFIHVGLVPDAGHLYYLP------------------RLVG 151 (257)
T ss_dssp HCCSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCTTHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECccccchhHHHHHhCCE--EEEcCCCEEeCcccccCCCCcchHHHHHH------------------HHhC
Confidence 468899999999999999999999998 999999998887666553 22222211 1112
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 152 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 182 (257)
T 2ej5_A 152 --RAKALELAVLGEKVTAEEAAALGLATKVIPL 182 (257)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTCCSEEECG
T ss_pred --HHHHHHHHHhCCccCHHHHHHcCCcceecCh
Confidence 2233444445667999999999999999864
No 18
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=98.29 E-value=1.6e-06 Score=63.74 Aligned_cols=88 Identities=18% Similarity=0.136 Sum_probs=65.6
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-....|. .|...-+ .+..|
T Consensus 93 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~~~vG 152 (258)
T 2pbp_A 93 IVKTPMIAAVNGLALGGGFELALSCDL--IVASSAAEFGFPEVNLGVMPGAGGTQRL------------------TKLIG 152 (258)
T ss_dssp TCCSCEEEEECSEEETHHHHHHHTSSE--EEEETTCEEECGGGGGTCCCCSSHHHHH------------------HHHHC
T ss_pred hCCCCEEEEEcCEEEhHHHHHHHhCCE--EEEcCCCEEECcccccCCCCcccHHHHH------------------HHHhC
Confidence 468899999999999999999999998 999999999887766553 2322221 11122
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 153 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 183 (258)
T 2pbp_A 153 --PKRALEWLWTGARMSAKEAEQLGIVNRVVSP 183 (258)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEEECG
T ss_pred --HHHHHHHHHcCCccCHHHHHHcCCcceeeCh
Confidence 2333444445567899999999999999864
No 19
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=98.29 E-value=1.2e-06 Score=65.02 Aligned_cols=90 Identities=16% Similarity=0.118 Sum_probs=66.8
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-.+..|. .|-..-+ .+..
T Consensus 102 ~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~r~v 161 (272)
T 1hzd_A 102 ANLPVPTIAAIDGLALGGGLELALACDI--RVAASSAKMGLVETKLAIIPGGGGTQRL------------------PRAI 161 (272)
T ss_dssp HTCSSCEEEEESEEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSHHHHH------------------HHHH
T ss_pred HhCCCCEEEEeCceEEecHHHHHHhCCE--EEEcCCCEEeCchhccCCCCCchHHHHH------------------HHHh
Confidence 3568899999999999999999999998 999999999887776553 2222211 1112
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
| ...-.+++-....++++||+++||||+|++..
T Consensus 162 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 194 (272)
T 1hzd_A 162 G--MSLAKELIFSARVLDGKEAKAVGLISHVLEQN 194 (272)
T ss_dssp C--HHHHHHHHHHTCEEEHHHHHHHTSCSEEECCC
T ss_pred C--HHHHHHHHHcCCcCCHHHHHHCCCcceecChh
Confidence 2 22334445456788999999999999998653
No 20
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=98.27 E-value=1.1e-06 Score=64.90 Aligned_cols=89 Identities=17% Similarity=0.156 Sum_probs=65.7
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|...-+... .
T Consensus 99 ~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~------------------v 158 (265)
T 3kqf_A 99 EQLPQPVIAAINGIALGGGTELSLACDF--RIAAESASLGLTETTLAIIPGAGGTQRLPRL------------------I 158 (265)
T ss_dssp HTCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSHHHHHHHH------------------H
T ss_pred HhCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCcEEECcccccCcCCCccHHHHHHHH------------------h
Confidence 3468899999999999999999999998 999999999887766553 2332222111 1
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 159 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 190 (265)
T 3kqf_A 159 G--VGRAKELIYTGRRISAQEAKEYGLVEFVVPV 190 (265)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCccEEeCH
Confidence 1 2222334445567999999999999999874
No 21
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=98.27 E-value=4.1e-06 Score=61.54 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=66.3
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|-..-+.. ..
T Consensus 102 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r------------------~v 161 (258)
T 3lao_A 102 PRRSKPLVVAVQGTCWTAGIELMLNADI--AVAARGTRFAHLEVLRGIPPLGGSTVRFPR------------------AA 161 (258)
T ss_dssp SCCCSCEEEEECSEEETHHHHHHHTSSE--EEEETTCEEECGGGGTCCCSSCCCCSHHHH------------------HH
T ss_pred HhCCCCEEEEECCEeEhHHHHHHHhCCE--EEEcCCCEEeCcccccCCCCCccHHHHHHH------------------Hh
Confidence 4578899999999999999999999998 999999998876665442 233222211 11
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
| ...-.+++-....++++||+++||||+|++..
T Consensus 162 G--~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 194 (258)
T 3lao_A 162 G--WTDAMRYILTGDEFDADEALRMRLLTEVVEPG 194 (258)
T ss_dssp C--HHHHHHHHTTCCCEEHHHHHHTTSCSEEECTT
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHcCCCcEeeChh
Confidence 1 22333455566779999999999999998753
No 22
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=98.27 E-value=1.3e-06 Score=64.83 Aligned_cols=89 Identities=20% Similarity=0.136 Sum_probs=65.4
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ----GQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~----G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|.. |-..-+.. ..
T Consensus 111 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r------------------~v 170 (279)
T 3g64_A 111 ECPFPVIAALHGVAAGAGAVLALAADF--RVADPSTRFAFLFTRVGLSGGDMGAAYLLPR------------------VV 170 (279)
T ss_dssp HSSSCEEEEECSEEETHHHHHHHHSSE--EEECTTCEEECCGGGGTCCSCCTTHHHHHHH------------------HH
T ss_pred hCCCCEEEEEcCeeccccHHHHHhCCE--EEEeCCCEEeCchhhcCCCCCchhHHHHHHH------------------Hh
Confidence 468899999999999999999999998 9999999988766665543 22222211 11
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
| ...-.+++-....++++||+++||||+|++..
T Consensus 171 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 203 (279)
T 3g64_A 171 G--LGHATRLLMLGDTVRAPEAERIGLISELTEEG 203 (279)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTCCSEECCTT
T ss_pred C--HHHHHHHHHcCCCcCHHHHHHCCCCCEecCch
Confidence 1 22233444455679999999999999998753
No 23
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=98.26 E-value=1.2e-06 Score=64.58 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=65.7
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|...-+... .
T Consensus 95 ~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~------------------v 154 (261)
T 3pea_A 95 EKCSKPVIAAIHGAALGGGLEFAMSCHM--RFATESAKLGLPELTLGLIPGFAGTQRLPRY------------------V 154 (261)
T ss_dssp HTCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSHHHHHHHH------------------H
T ss_pred HhCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECcccccCcCCCccHHHHHHHH------------------h
Confidence 3568899999999999999999999998 999999998877666553 2332222111 1
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 155 G--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 186 (261)
T 3pea_A 155 G--KAKACEMMLTSTPITGAEALKWGLVNGVFAE 186 (261)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCccEecCH
Confidence 1 2333344444567999999999999999865
No 24
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=98.26 E-value=1.9e-06 Score=62.91 Aligned_cols=90 Identities=13% Similarity=0.180 Sum_probs=64.8
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|..-. .-- . .+.+..| .
T Consensus 92 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~---~g~------------~-~l~~~vG--~ 151 (250)
T 2a7k_A 92 NVNKPTIAAVDGYAIGMGFQFALMFDQ--RLMASTANFVMPELKHGIGCS---VGA------------A-ILGFTHG--F 151 (250)
T ss_dssp TCCSCEEEEECSEEETHHHHHHTTSSE--EEEETTCEEECCGGGGTCCCH---HHH------------H-HHHHHHC--H
T ss_pred cCCCCEEEEECCeEeHHHHHHHHhCCE--EEEcCCCEEeCcccccCCCCC---cHH------------H-HHHHHhH--H
Confidence 468899999999999999999999998 999999998876655443211 000 0 1122222 2
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
..-.+++-....++++||+++||||+|++.
T Consensus 152 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 181 (250)
T 2a7k_A 152 STMQEIIYQCQSLDAPRCVDYRLVNQVVES 181 (250)
T ss_dssp HHHHHHHHHCCCBCHHHHHHHTCCSEEECH
T ss_pred HHHHHHHHcCCcccHHHHHHcCCcceecCH
Confidence 233444545667999999999999999864
No 25
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=98.25 E-value=1e-06 Score=65.26 Aligned_cols=89 Identities=16% Similarity=0.136 Sum_probs=66.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-....|. .|-.. .+.+..|
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~------------------~l~r~vG 164 (275)
T 1dci_A 105 KCPKPVIAAIHGGCIGGGVDLISACDI--RYCTQDAFFQVKEVDVGLAADVGTLQ------------------RLPKVIG 164 (275)
T ss_dssp HSSSCEEEEECSEEETHHHHHHTTSSE--EEEETTCEEECCGGGGTSCCCSSHHH------------------HGGGTCS
T ss_pred hCCCCEEEEECCeeeHHHHHHHHhCCE--EEEeCCCEEeCcccccCCCCCccHHH------------------HHHHHhC
Confidence 468899999999999999999999998 999999999877766543 22211 1223333
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
. ...-.+++-....++++||+++||||+|++.
T Consensus 165 ~-~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 196 (275)
T 1dci_A 165 N-RSLVNELTFTARKMMADEALDSGLVSRVFPD 196 (275)
T ss_dssp C-HHHHHHHHHHCCEEEHHHHHHHTSSSEEESS
T ss_pred c-HHHHHHHHHcCCCCCHHHHHHcCCcceecCC
Confidence 2 1344455555677999999999999999864
No 26
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=98.25 E-value=3.7e-06 Score=62.56 Aligned_cols=89 Identities=10% Similarity=0.017 Sum_probs=66.7
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-....|.. |-..-+ .+..|
T Consensus 119 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~vG 178 (280)
T 2f6q_A 119 DFPKPLIAVVNGPAVGISVTLLGLFDA--VYASDRATFHTPFSHLGQSPEGCSSYTF------------------PKIMS 178 (280)
T ss_dssp SCCSCEEEEECSCEETHHHHGGGGCSE--EEEETTCEEECCTGGGTCCCCTTHHHHH------------------HHHHC
T ss_pred cCCCCEEEEECCeeehHHHHHHHhCCE--EEECCCcEEECchHhhCCCCcccHHHHH------------------HHHhC
Confidence 568899999999999999999999998 9999999988876665532 222221 11222
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
...-.+++-....++++||+++||||+|++..
T Consensus 179 --~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~ 210 (280)
T 2f6q_A 179 --PAKATEMLIFGKKLTAGEACAQGLVTEVFPDS 210 (280)
T ss_dssp --HHHHHHHHTTCCCEEHHHHHHTTSCSEEECTT
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCcceEECHH
Confidence 23344555566779999999999999998753
No 27
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=98.25 E-value=1.8e-06 Score=63.43 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=65.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+.|.|.+.|.-|+++||. |++.++++|.+-...-|. .|...-+.. ..|
T Consensus 90 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r------------------~vG 149 (255)
T 3p5m_A 90 SLPKPVIAGVHGAAVGFGCSLALACDL--VVAAPASYFQLAFTRVGLMPDGGASALLPL------------------LIG 149 (255)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHSSE--EEECTTCEEECGGGGGTCCCCTTHHHHTHH------------------HHC
T ss_pred hCCCCEEEEeCCeehhhHHHHHHHCCE--EEEcCCcEEeCcccccCcCCCccHHHHHHH------------------HhC
Confidence 468899999999999999999999998 999999998877666543 222222211 111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
...-.+++-....++++||+++||||+|++..
T Consensus 150 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 181 (255)
T 3p5m_A 150 --RARTSRMAMTAEKISAATAFEWGMISHITSAD 181 (255)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEECCTT
T ss_pred --HHHHHHHHHcCCCcCHHHHHHCCCCCEeeCHH
Confidence 22223444455679999999999999998753
No 28
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=98.25 E-value=2.7e-06 Score=62.49 Aligned_cols=88 Identities=14% Similarity=0.048 Sum_probs=66.9
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|..-...-|..+-..- +.+..| .
T Consensus 96 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~pg~~~------------------l~~~vG--~ 153 (254)
T 3isa_A 96 GSPSLTLALAHGRNFGAGVDLFAACKW--RYCTPEAGFRMPGLKFGLVLGTRR------------------FRDIVG--A 153 (254)
T ss_dssp TCSSEEEEEECSEEETHHHHHHHHSSE--EEECTTCEEECCGGGGTCCCSHHH------------------HHHHHC--H
T ss_pred hCCCCEEEEECCeEeecchhHHHhCCE--EEEcCCCEEECchhccCccHHHHH------------------HHHHcC--H
Confidence 467899999999999999999999998 999999999877666555432111 112222 2
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
..-.+++-....++++||+++||||+|++.
T Consensus 154 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 183 (254)
T 3isa_A 154 DQALSILGSARAFDADEARRIGFVRDCAAQ 183 (254)
T ss_dssp HHHHHHHTTTCEEEHHHHHHTTSSSEECCG
T ss_pred HHHHHHHHhCCCCcHHHHHHCCCccEEeCh
Confidence 334455566678999999999999999875
No 29
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=98.24 E-value=1.8e-06 Score=63.53 Aligned_cols=91 Identities=11% Similarity=0.124 Sum_probs=64.9
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEec--CCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSL--PNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~--p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++. ++++|.+-....|..-...- ...+.+..|
T Consensus 95 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~~~a~f~~pe~~~Gl~p~~g~---------------~~~l~~~vG- 156 (260)
T 1sg4_A 95 QSNLVLVSAINGACPAGGCLVALTCDY--RILADNPRYCIGLNETQLGIIAPFWL---------------KDTLENTIG- 156 (260)
T ss_dssp TCSSEEEEEECEEBCHHHHHHHTTSSE--EEEECCTTCCBSCCGGGGTCCCCHHH---------------HHHHHHHHC-
T ss_pred cCCCCEEEEECCeeehHHHHHHHhCCE--EEEecCCCCEEeCchhhhCCCCchhH---------------HHHHHHHhC-
Confidence 467899999999999999999999998 9999 89998876665453222110 001122222
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 157 -~~~a~~llltg~~~~a~eA~~~GLv~~vv~~ 187 (260)
T 1sg4_A 157 -HRAAERALQLGLLFPPAEALQVGIVDQVVPE 187 (260)
T ss_dssp -HHHHHHHHHHTCCBCHHHHHHHTSSSEEECG
T ss_pred -HHHHHHHHHcCCcCCHHHHHHcCCCCEecCH
Confidence 2233445445667999999999999999864
No 30
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=98.24 E-value=2.4e-06 Score=62.55 Aligned_cols=90 Identities=16% Similarity=0.098 Sum_probs=64.6
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-+... .
T Consensus 88 ~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~------------------v 147 (254)
T 3hrx_A 88 SGLEKPLVVAVNGVAAGAGMSLALWGDL--RLAAVGASFTTAFVRIGLVPDSGLSFLLPRL------------------V 147 (254)
T ss_dssp HTCSSCEEEEECSEEETHHHHHHTTCSE--EEEETTCEEECCGGGGTCCCCTTHHHHHHHH------------------H
T ss_pred HhCCCCEEEEECCEeeehhhhhhhccce--eeEcCCCEEEchhhCcCcCCcccHHHHHHHH------------------h
Confidence 3568899999999999999999999998 999999999876665443 2222222111 1
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
....-.+++-....++++||+++||||+|+++.
T Consensus 148 --G~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~ 180 (254)
T 3hrx_A 148 --GLAKAQELLLLSPRLSAEEALALGLVHRVVPAE 180 (254)
T ss_dssp --CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred --CcchHHHHhhcCcccCHHHHHHCCCeEEecCcH
Confidence 112222333344678999999999999998753
No 31
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=98.24 E-value=6e-06 Score=60.88 Aligned_cols=90 Identities=10% Similarity=0.043 Sum_probs=67.5
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-+. +..
T Consensus 99 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~v 158 (265)
T 3swx_A 99 RQLSKPLLVAVHGKVLTLGIELALAADI--VIADETATFAQLEVNRGIYPFGGATIRFP------------------RTA 158 (265)
T ss_dssp CCCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTSCCCSSHHHHHH------------------HHH
T ss_pred HhCCCCEEEEEcCeeehHHHHHHHHCCE--EEEcCCCEEECcccccccCCCccHHHHHH------------------HHh
Confidence 4578899999999999999999999998 999999999877665443 22222121 111
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
| ...-.+++-....++++||+++||||+|++..
T Consensus 159 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 3swx_A 159 G--WGNAMRWMLTADTFDAVEAHRIGIVQEIVPVG 191 (265)
T ss_dssp C--HHHHHHHHTTCCCEEHHHHHHTTSCSEEESTT
T ss_pred h--HHHHHHHHHcCCcCCHHHHHHcCCCCEecChh
Confidence 1 23344556667789999999999999998753
No 32
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=98.23 E-value=3.6e-06 Score=62.46 Aligned_cols=89 Identities=15% Similarity=0.115 Sum_probs=66.4
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|....+. +..
T Consensus 113 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------r~v- 171 (278)
T 4f47_A 113 RLKKPLIAAVEGPAIAGGTEILQGTDI--RVAAESAKFGISEAKWSLYPMGGSAVRLV------------------RQI- 171 (278)
T ss_dssp CCSSCEEEEECSEEETHHHHHHTTCSE--EEEETTCEEECCGGGGTCCCTTSHHHHHH------------------HHS-
T ss_pred CCCCCEEEEECCEEehHHHHHHHhCCE--EEEcCCCEEECcccccCCCCCccHHHHHH------------------HHh-
Confidence 678999999999999999999999998 999999998776665443 23332221 111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
....-.+++-....++++||+++||||+|++..
T Consensus 172 -G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 204 (278)
T 4f47_A 172 -PYTVACDLLLTGRHITAAEAKEMGLVGHVVPDG 204 (278)
T ss_dssp -CHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT
T ss_pred -CHHHHHHHHHcCCcCCHHHHHHCCCceEeeChh
Confidence 223334444455679999999999999998753
No 33
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=98.23 E-value=2.4e-06 Score=62.70 Aligned_cols=88 Identities=15% Similarity=0.120 Sum_probs=64.2
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|...-+.... |
T Consensus 97 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~v------------------G 156 (256)
T 3qmj_A 97 GFPKPLICAVNGLGVGIGATILGYADL--AFMSSTARLKCPFTSLGVAPEAASSYLLPQLV------------------G 156 (256)
T ss_dssp HCCSCEEEEECSEEETHHHHGGGGCSE--EEEETTCEEECCGGGC---CCTTHHHHHHHHH------------------H
T ss_pred hCCCCEEEEECCeehhHHHHHHHhCCE--EEEeCCCEEECcccccCCCCCccHHHHHHHHh------------------C
Confidence 468899999999999999999999998 999999999887666443 23222221111 1
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 157 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 187 (256)
T 3qmj_A 157 --RQNAAWLLMSSEWIDAEEALRMGLVWRICSP 187 (256)
T ss_dssp --HHHHHHHHHSCCCEEHHHHHHHTSSSEEECG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEEeCH
Confidence 1122344445677899999999999999865
No 34
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=98.23 E-value=2.5e-06 Score=62.75 Aligned_cols=88 Identities=13% Similarity=0.043 Sum_probs=64.6
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|.. |-..-+. +..|
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------~~vG 158 (261)
T 2gtr_A 99 QFKKPIIVAVNGPAIGLGASILPLCDV--VWANEKAWFQTPYTTFGQSPDGCSTVMFP------------------KIMG 158 (261)
T ss_dssp HCCSCEEEEECSCEETHHHHTGGGSSE--EEEETTCEEECCTTTTTCCCCTTHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECCeEeeHHHHHHHhCCE--EEEcCCCEEeCchhccCCCccchHHHHHH------------------HHcC
Confidence 468899999999999999999999998 9999999988776665532 2222221 1112
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 159 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 189 (261)
T 2gtr_A 159 --GASANEMLLSGRKLTAQEACGKGLVSQVFWP 189 (261)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEEECG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCcccccCh
Confidence 2333344444566999999999999999864
No 35
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=98.22 E-value=2.9e-06 Score=62.88 Aligned_cols=88 Identities=17% Similarity=0.112 Sum_probs=66.0
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|-..-+. +..|
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------~~vG 164 (273)
T 2uzf_A 105 IIPKPVIAMVKGYAVGGGNVLNVVCDL--TIAADNAIFGQTGPKVGSFDAGYGSGYLA------------------RIVG 164 (273)
T ss_dssp HSSSCEEEEECEEEETHHHHHHHHSSE--EEEETTCEEECCGGGTTCCCCSTTTHHHH------------------HHHC
T ss_pred hCCCCEEEEECCEEeehhHHHHHhCCE--EEEcCCCEEECchhhhCCCCchhHHHHHH------------------HHhC
Confidence 467899999999999999999999998 999999998877766543 23322221 1112
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 165 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 195 (273)
T 2uzf_A 165 --HKKAREIWYLCRQYNAQEALDMGLVNTVVPL 195 (273)
T ss_dssp --HHHHHHHHHTCCCEEHHHHHHHTSSSEEECG
T ss_pred --HHHHHHHHHhCCCCCHHHHHHcCCCccccCH
Confidence 2233445556678999999999999999864
No 36
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=98.22 E-value=3.2e-06 Score=62.51 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=64.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-....|.. |...-+.. ..|
T Consensus 97 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r------------------~vG 156 (266)
T 3fdu_A 97 RLSKPLIIAVKGVAIGIGVTILLQADL--VFADNTALFQIPFVSLGLSPEGGASQLLVK------------------QAG 156 (266)
T ss_dssp HCCSCEEEEECSEEETHHHHGGGGCSE--EEECTTCEEECCTTTTTCCCCTTHHHHHHH------------------HHC
T ss_pred hCCCCEEEEECCEEehHHHHHHHhCCE--EEEcCCCEEECchhhhCCCCcchHHHHHHH------------------HhC
Confidence 468899999999999999999999998 9999999998777665532 22222211 111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILK 111 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~ 111 (114)
...-.+++-....++++||+++||||+|++
T Consensus 157 --~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~ 186 (266)
T 3fdu_A 157 --YHKAAELLFTAKKFNAETALQAGLVNEIVE 186 (266)
T ss_dssp --HHHHHHHHHHCCEECHHHHHHTTSCSEECS
T ss_pred --HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH
Confidence 222344444456799999999999999975
No 37
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=98.21 E-value=4.1e-06 Score=61.74 Aligned_cols=89 Identities=12% Similarity=0.100 Sum_probs=66.4
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+.|.|.+.|.-|+++||. |++.++++|.+-...-|.. |...-+.. ..
T Consensus 100 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~------------------~v- 158 (265)
T 3rsi_A 100 TLTKPLIAAVNGACLGGGCEMLQQTDI--RVSDEHATFGLPEVQRGLVPGAGSMVRLKR------------------QI- 158 (265)
T ss_dssp CCSSCEEEEECSCEETHHHHHHTTCSE--EEEETTCEEECGGGGGTCCCTTTHHHHHHH------------------HS-
T ss_pred CCCCCEEEEECCeeeHHHHHHHHHCCE--EEecCCCEEECchhccCCCCCccHHHHHHH------------------Hh-
Confidence 678999999999999999999999998 9999999988766665432 22222211 11
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
....-.+++-....++++||+++||||+|++..
T Consensus 159 -G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 3rsi_A 159 -PYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAG 191 (265)
T ss_dssp -CHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTT
T ss_pred -CHHHHHHHHHcCCCCCHHHHHHCCCccEecChh
Confidence 223334445456789999999999999998753
No 38
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=98.21 E-value=3.1e-06 Score=62.06 Aligned_cols=88 Identities=17% Similarity=0.127 Sum_probs=64.9
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|.. |...-+ .+..|
T Consensus 89 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~r~vG 148 (254)
T 3gow_A 89 GLEKPLVVAVNGVAAGAGMSLALWGDL--RLAAVGASFTTAFVRIGLVPDSGLSFLL------------------PRLVG 148 (254)
T ss_dssp TCSSCEEEEECSEEETHHHHHHTTCSE--EEEETTCEEECCGGGGTCCCCTTHHHHH------------------HHHHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHHCCE--EEEcCCCEEeCcccccCCCCCccHHHHH------------------HHHhC
Confidence 468899999999999999999999998 9999999988766664432 222111 11111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 149 --~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~ 179 (254)
T 3gow_A 149 --LAKAQELLLLSPRLSAEEALALGLVHRVVPA 179 (254)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred --HHHHHHHHHcCCccCHHHHHHcCCCCEecCH
Confidence 2223344445678999999999999999875
No 39
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=98.21 E-value=2.4e-06 Score=63.06 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=66.6
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|..+. --. ..+.+.. ..
T Consensus 102 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~~~-g~~---------------~~l~r~v--G~ 161 (263)
T 3l3s_A 102 HCPKPTIALVEGIATAAGLQLMAACDL--AYASPAARFCLPGVQNGGFCT-TPA---------------VAVSRVI--GR 161 (263)
T ss_dssp TCSSCEEEEESSEEETHHHHHHHHSSE--EEECTTCEEECCTTTTTSCCH-HHH---------------HHHHTTS--CH
T ss_pred hCCCCEEEEECCEEEHHHHHHHHHCCE--EEecCCCEEeCchhccCCCCc-cHH---------------HHHHHHc--CH
Confidence 468899999999999999999999998 999999998876666554421 110 0111222 23
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
..-.+++-....++++||+++||||+|++.
T Consensus 162 ~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~ 191 (263)
T 3l3s_A 162 RAVTEMALTGATYDADWALAAGLINRILPE 191 (263)
T ss_dssp HHHHHHHHHCCEEEHHHHHHHTSSSEECCH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEEeCH
Confidence 444555556677999999999999999864
No 40
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=98.20 E-value=2.1e-06 Score=64.24 Aligned_cols=90 Identities=19% Similarity=0.075 Sum_probs=66.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|..-..-- .. +.+..| .
T Consensus 124 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~p~~g~---------------~~-L~r~vG--~ 183 (287)
T 2vx2_A 124 NHPVPVIAMVNGLATAAGCQLVASCDI--AVASDKSSFATPGVNVGLFCSTPG---------------VA-LARAVP--R 183 (287)
T ss_dssp TCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCHHHH---------------HH-HHTTSC--H
T ss_pred hCCCCEEEEECCEEEcHHHHHHHhCCE--EEEcCCCEEECchhhhCCCCchHH---------------HH-HHHHhh--H
Confidence 568899999999999999999999998 999999998876665543211000 01 222223 3
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
..-.+++-....++++||+++||||+|++.
T Consensus 184 ~~A~~llltg~~i~A~eA~~~GLv~~vv~~ 213 (287)
T 2vx2_A 184 KVALEMLFTGEPISAQEALLHGLLSKVVPE 213 (287)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred HHHHHHHHhCCCCCHHHHHHCCCcceecCH
Confidence 344455555677999999999999999864
No 41
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=98.20 E-value=3.1e-06 Score=63.43 Aligned_cols=88 Identities=13% Similarity=0.072 Sum_probs=66.1
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-+ .+..|
T Consensus 117 ~~~kPvIAaV~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~p~~g~~~~L------------------~r~vG 176 (291)
T 2fbm_A 117 QFKKPIVVSVNGPAIGLGASILPLCDL--VWANEKAWFQTPYTTFGQSPDGCSSITF------------------PKMMG 176 (291)
T ss_dssp HCCSCEEEEECSCEETHHHHTGGGSSE--EEEETTCEEECCHHHHTCCCCTTHHHHH------------------HHHHC
T ss_pred hCCCCEEEEECCeeecHHHHHHHhCCE--EEEeCCCEEECcHHhcCCCCcccHHHHH------------------HHHHh
Confidence 468899999999999999999999998 999999998876655442 2221111 11122
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 177 --~~~A~el~ltg~~i~A~eA~~~GLV~~vv~~ 207 (291)
T 2fbm_A 177 --KASANEMLIAGRKLTAREACAKGLVSQVFLT 207 (291)
T ss_dssp --HHHHHHHHTSCCEEEHHHHHHTTSCSEEECS
T ss_pred --HHHHHHHHHcCCccCHHHHHHCCCcceecCh
Confidence 2344556666778999999999999999865
No 42
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=98.20 E-value=3.3e-06 Score=62.82 Aligned_cols=89 Identities=12% Similarity=0.119 Sum_probs=66.1
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-....|. .|-..-+. +..|
T Consensus 104 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------r~vG 163 (275)
T 3hin_A 104 YCRVPVIAALKGAVIGGGLELACAAHI--RVAEASAYYALPEGSRGIFVGGGGSVRLP------------------RLIG 163 (275)
T ss_dssp TCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECchhccCCCCCccHHHHHH------------------HHhC
Confidence 468899999999999999999999998 999999999877766553 22222221 1112
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
...-.+++-....++++||+++||||+|++..
T Consensus 164 --~~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 195 (275)
T 3hin_A 164 --VARMADMMLTGRVYSAAEGVVHGFSQYLIENG 195 (275)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEESSS
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCCCEEeChh
Confidence 23333444456789999999999999998753
No 43
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=98.19 E-value=3.6e-06 Score=62.16 Aligned_cols=89 Identities=19% Similarity=0.085 Sum_probs=63.6
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-+....
T Consensus 95 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~v------------------ 154 (265)
T 3qxz_A 95 FELRTPVIAAVNGHAIGIGMTLALHADI--RILAEEGRYAIPQVRFGVAPDALAHWTLPRLV------------------ 154 (265)
T ss_dssp GGSSSCEEEEECSEEETHHHHHHTTSSE--EEEETTCCEECCGGGGTSCCCTTHHHHTHHHH------------------
T ss_pred HhCCCCEEEEECCEEehHhHHHHHHCCE--EEEcCCCEEECcccccCcCCCccHHHHHHHHh------------------
Confidence 4568899999999999999999999998 999999998876665443 22222221111
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 155 G--~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~ 186 (265)
T 3qxz_A 155 G--TAVAAELLLTGASFSAQRAVETGLANRCLPA 186 (265)
T ss_dssp H--HHHHHHHHHHCCCBCHHHHHHHTSCSEEECH
T ss_pred C--HHHHHHHHHcCCCcCHHHHHHCCCccEeeCH
Confidence 0 1111233334457899999999999999864
No 44
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=98.19 E-value=2.8e-06 Score=63.35 Aligned_cols=88 Identities=20% Similarity=0.211 Sum_probs=65.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|...-+.. ..|
T Consensus 113 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~p~~g~~~~L~r------------------~vG 172 (277)
T 4di1_A 113 AIPKPTVAAVTGYALGAGLTLALAADW--RVSGDNVKFGATEILAGLIPGGGGMGRLTR------------------VVG 172 (277)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCTTHHHHHHH------------------HHC
T ss_pred hCCCCEEEEECCeEehhHHHHHHhCCE--EEEcCCCEEECcccccCCCCCchHHHHHHH------------------HhC
Confidence 468899999999999999999999998 999999999876666543 222222211 111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 173 --~~~A~~llltG~~i~A~eA~~~GLV~~vv~~ 203 (277)
T 4di1_A 173 --SSRAKELVFSGRFFDAEEALALGLIDDMVAP 203 (277)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEEeCh
Confidence 2233344445678999999999999999875
No 45
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=98.19 E-value=2.7e-06 Score=63.37 Aligned_cols=88 Identities=14% Similarity=0.068 Sum_probs=65.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+.|.|.+.|.-|+++||. |++.++++|.+-...-|. .|...-+.. ..|
T Consensus 113 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~p~~g~~~~L~r------------------~vG 172 (278)
T 3h81_A 113 AVRTPTIAAVAGYALGGGCELAMMCDV--LIAADTAKFGQPEIKLGVLPGMGGSQRLTR------------------AIG 172 (278)
T ss_dssp TCCSCEEEEECBEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSHHHHHHH------------------HHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHHCCE--EEEcCCCEEECchhhcCcCCCccHHHHHHH------------------HhC
Confidence 468899999999999999999999998 999999999877766553 232222211 111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 173 --~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~ 203 (278)
T 3h81_A 173 --KAKAMDLILTGRTMDAAEAERSGLVSRVVPA 203 (278)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred --HHHHHHHHHhCCCcCHHHHHHCCCccEEeCh
Confidence 2233344445567999999999999999875
No 46
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=98.19 E-value=3.6e-06 Score=61.97 Aligned_cols=89 Identities=15% Similarity=0.096 Sum_probs=65.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+.|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-+. +..|
T Consensus 93 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~vG 152 (258)
T 4fzw_A 93 AFNKPLIAAVNGYALGAGCELALLCDV--VVAGENARFGLPEITLGIMPGAGGTQRLI------------------RSVG 152 (258)
T ss_dssp TCCSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSHHHHHH------------------HHHC
T ss_pred HCCCCEEEEEcCcceeeeeEeecccce--EEECCCCEEECcccCCCcCCCchHHHHHH------------------HHhC
Confidence 467899999999999999999999998 999999999876665553 22222211 1111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
...-.+++-....++++||+++||||+|+++.
T Consensus 153 --~~~A~~llltg~~i~a~eA~~~GLv~~vv~~~ 184 (258)
T 4fzw_A 153 --KSLASKMVLSGESITAQQAQQAGLVSDVFPSD 184 (258)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT
T ss_pred --HHHHHHHHHcCCcCcHHHHHHCCCeeEEeCch
Confidence 22233444456789999999999999998754
No 47
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=98.19 E-value=1.8e-06 Score=63.59 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=65.0
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+....-|. .|-..-+. +..
T Consensus 89 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------r~v 148 (256)
T 3pe8_A 89 PDMTKPVIGAINGAAVTGGLELALYCDI--LIASENAKFADTHARVGLMPTWGLSVRLP------------------QKV 148 (256)
T ss_dssp CCCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCSSHHHHHH------------------HHH
T ss_pred HhCCCCEEEEECCeeechHHHHHHhCCE--EEEcCCCEEECchhhhCCCCcccHHHHHH------------------Hhc
Confidence 4568899999999999999999999998 999999999876655442 22222221 111
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 149 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 180 (256)
T 3pe8_A 149 G--VGLARRMSLTGDYLSAQDALRAGLVTEVVAH 180 (256)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSCSCEECG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCCeEEeCH
Confidence 1 2223344445567999999999999999875
No 48
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=98.19 E-value=6.2e-06 Score=60.62 Aligned_cols=88 Identities=14% Similarity=0.141 Sum_probs=65.8
Q ss_pred cCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
++.||.+.+-|.|.+.|.-|+++||. |++.++++|..-...-|. .|...-+ .+..
T Consensus 92 ~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~r~v-- 149 (256)
T 3trr_A 92 PRKPIIAAVEGFALAGGTELVLSCDL--VVAGRSAKFGIPEVKRGLVAGAGGLLRL------------------PNRI-- 149 (256)
T ss_dssp CSSCEEEEECSBCCTHHHHHHHTSSE--EEEETTCEECCCGGGGTCCCCSSHHHHH------------------HHHS--
T ss_pred CCCCEEEEECCeeeechhHHHHhCCE--EEECCCCEEEehhhccCCCCCccHHHHH------------------HHHh--
Confidence 57899999999999999999999998 999999998766555443 2222222 1112
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
....-.+++-....++++||+++||||+|++..
T Consensus 150 G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 182 (256)
T 3trr_A 150 PYQVAMELALTGESFTAEDAAKYGFINRLVDDG 182 (256)
T ss_dssp CHHHHHHHHHHCCCEEHHHHGGGTCCSEEECTT
T ss_pred CHHHHHHHHHhCCCcCHHHHHHCCCeeEecChH
Confidence 234445555566789999999999999998753
No 49
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=98.17 E-value=4e-06 Score=62.25 Aligned_cols=89 Identities=9% Similarity=0.041 Sum_probs=65.7
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|.. |-..-+ .+..
T Consensus 103 ~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~r~v 162 (276)
T 2j5i_A 103 RMYAKPTIAMVNGWCFGGGFSPLVACDL--AICADEATFGLSEINWGIPPGNLVSKAM------------------ADTV 162 (276)
T ss_dssp TTCSSCEEEEECSCEEGGGHHHHHHSSE--EEEETTCEEECGGGGGTCCCCTTHHHHH------------------HHHS
T ss_pred HhCCCCEEEEECCeeehhHHHHHHhCCE--EEEcCCCEEeCcccccCCCCcchHHHHH------------------HHHh
Confidence 4568899999999999999999999998 9999999988766654432 222211 1122
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 163 G--~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~ 194 (276)
T 2j5i_A 163 G--HRQSLMYIMTGKTFGGQKAAEMGLVNESVPL 194 (276)
T ss_dssp C--HHHHHHHHHHCCEEEHHHHHHHTSSSEEECH
T ss_pred C--HHHHHHHHHhCCcccHHHHHHcCCccEeeCH
Confidence 2 2333445555678999999999999999863
No 50
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=98.17 E-value=4.6e-06 Score=61.93 Aligned_cols=89 Identities=18% Similarity=0.128 Sum_probs=65.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+.|.|.+.|.-|+++||- |++.++++|.+-.+.-|.. |-..-+.. ..
T Consensus 109 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r------------------~v- 167 (274)
T 4fzw_C 109 KLPKPVICAVNGVAAGAGATLALGGDI--VIAARSAKFVMAFSKLGLIPDCGGTWLLPR------------------VA- 167 (274)
T ss_dssp HCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECCGGGTTCCCTTTHHHHHHH------------------HT-
T ss_pred HCCCCEEEEECCceeecCceeeeccce--EEECCCCEEECcccCcccCCCccHHHHHHH------------------Hh-
Confidence 468899999999999999999999998 9999999998776665532 22222211 11
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
....-.+++-....++++||+++||||+|++..
T Consensus 168 -G~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~ 200 (274)
T 4fzw_C 168 -GRARAMGLALLGNQLSAEQAHEWGMIWQVVDDE 200 (274)
T ss_dssp -CHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGG
T ss_pred -hHHHHHHHHHhCCcCCHHHHHHCCCceEEeChH
Confidence 122233344455679999999999999998753
No 51
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=98.16 E-value=3.1e-06 Score=63.65 Aligned_cols=89 Identities=12% Similarity=0.062 Sum_probs=65.6
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|-..-+. +..
T Consensus 127 ~~~~kPvIAaV~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------r~v 186 (298)
T 3qre_A 127 TMLRKPVIAAINGPCVGIGLTQALMCDV--RFAAAGAKFAAVFARRGLIAEFGISWILP------------------RLT 186 (298)
T ss_dssp GGSSSCEEEEECSCEETHHHHHHHHSSE--EEEETTCEEECCCCHHHHHCTTSHHHHHH------------------HHS
T ss_pred HhCCCCEEEEECCceeecchHHHhhCCE--EEEcCCCEEECcccccCCCcchhHHHHHH------------------Hhc
Confidence 4568899999999999999999999998 999999998876655332 22222221 111
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 187 G--~~~A~ellltg~~i~A~eA~~~GLV~~vv~~ 218 (298)
T 3qre_A 187 S--WAVALDLLLSGRTFLAEEAAQLGLVKEVVTP 218 (298)
T ss_dssp C--HHHHHHHHHHCCEEEHHHHHHTTSCSEEECG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHcCCCeEecCH
Confidence 2 2333444545668999999999999999865
No 52
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=98.16 E-value=2.9e-06 Score=62.64 Aligned_cols=89 Identities=15% Similarity=0.088 Sum_probs=65.6
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|...-+.. ..
T Consensus 97 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~------------------~v 156 (263)
T 3moy_A 97 TQVRKPIVAAVAGYALGGGCELAMLCDL--VIAADTARFGQPEITLGILPGLGGTQRLTR------------------AV 156 (263)
T ss_dssp TTCCSCEEEEECBEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCSSSTTTHHHH------------------HH
T ss_pred HhCCCCEEEEECCEeehHHHHHHHHCCE--EEecCCCEEeCcccccCCCCchhHHHHHHH------------------Hh
Confidence 3568899999999999999999999998 999999998877666443 233222211 11
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 157 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 188 (263)
T 3moy_A 157 G--KAKAMDLCLTGRSLTAEEAERVGLVSRIVPA 188 (263)
T ss_dssp C--HHHHHHHHHHCCEEEHHHHHHTTSCSEEECG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCccEecCc
Confidence 1 1223344445678999999999999999865
No 53
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=98.16 E-value=2.2e-06 Score=63.15 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=64.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCc-eeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNS-RIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s-~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.+++ +|.+-...-|. .|-..-+ .+..
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~ag~f~~pe~~~Gl~p~~g~~~~l------------------~~~v 158 (265)
T 2ppy_A 99 RSPQVYIACLEGHTVGGGLEMALACDL--RFMGDEAGKIGLPEVSLGVLAGTGGTQRL------------------ARLI 158 (265)
T ss_dssp HSSSEEEEEECSEEETHHHHHHHTSSE--EEEETTCCCEECCGGGGTCCCTTTHHHHH------------------HHHH
T ss_pred cCCCCEEEEECCEEeeHHHHHHHhCCE--EEEeCCCCEEECcccccCCCCCchHHHHH------------------HHHh
Confidence 468899999999999999999999998 9999999 98876665443 2222211 1122
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 159 G--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 190 (265)
T 2ppy_A 159 G--YSRALDMNITGETITPQEALEIGLVNRVFPQ 190 (265)
T ss_dssp C--HHHHHHHHHHCCCBCHHHHHHHTSSSEEECG
T ss_pred C--HHHHHHHHHhCCccCHHHHHHCCCcceecCH
Confidence 2 2233344444567999999999999999864
No 54
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=98.15 E-value=1.5e-06 Score=64.08 Aligned_cols=87 Identities=14% Similarity=0.111 Sum_probs=64.4
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|-..-+.. ..
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~------------------~v- 157 (263)
T 3lke_A 99 TSPKVTVALINGYAYGGGFNMMLACDR--RIALRRAKFLENFHKMGISPDLGASYFLPR------------------II- 157 (263)
T ss_dssp TCSSEEEEEECSEEETHHHHGGGGSSE--EEEETTCEEECCHHHHTCCCCTTHHHHHHH------------------HH-
T ss_pred hCCCCEEEEECCEeeHHHHHHHHHCCE--EEEcCCCEEeCchHhhCCCCCccHHHHHHH------------------Hh-
Confidence 468899999999999999999999998 999999998876655442 222222211 11
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILK 111 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~ 111 (114)
....-.+++-....++++||+++||||+|++
T Consensus 158 -G~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~ 188 (263)
T 3lke_A 158 -GYEQTMNLLLEGKLFTSEEALRLGLIQEICE 188 (263)
T ss_dssp -CHHHHHHHHHHCCCEEHHHHHHHTSSSEEES
T ss_pred -CHHHHHHHHHhCCCcCHHHHHHcCCCcEecC
Confidence 1233344444556899999999999999986
No 55
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=98.15 E-value=3.7e-06 Score=62.28 Aligned_cols=88 Identities=14% Similarity=0.057 Sum_probs=64.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC-CC-HHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ-GQ-ASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~-G~-~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-....|.. +- ..-+ .+..|
T Consensus 97 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~l------------------~~~vG- 155 (268)
T 3i47_A 97 QSPKPTIAMVQGAAFGGGAGLAAACDI--AIASTSARFCFSEVKLGLIPAVISPYV------------------VRAIG- 155 (268)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCTTTHHHH------------------HHHHC-
T ss_pred hCCCCEEEEECCEEEhHhHHHHHhCCE--EEEcCCCEEECcccccCCCcccHHHHH------------------HHHhC-
Confidence 468899999999999999999999998 9999999987766554432 11 1111 11111
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 156 -~~~A~~llltg~~i~A~eA~~~GLV~~vv~~ 186 (268)
T 3i47_A 156 -ERAAKMLFMSAEVFDATRAYSLNLVQHCVPD 186 (268)
T ss_dssp -HHHHHHHHHHCCEEEHHHHHHTTSCSEEECG
T ss_pred -HHHHHHHHHcCCccCHHHHHHcCCCcEeeCh
Confidence 2233444555678999999999999999875
No 56
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=98.13 E-value=7.8e-06 Score=60.43 Aligned_cols=89 Identities=18% Similarity=0.136 Sum_probs=66.1
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|...-+ .+..|
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~vG 158 (267)
T 3r9t_A 99 FIDKPTIAAVNGTALGGGTELALASDL--VVADERAQFGLPEVKRGLIAAAGGVFRI------------------AEQLP 158 (267)
T ss_dssp CCSSCEEEEECSEECTHHHHHHHHSSE--EEEETTCEECCGGGGTTCCCTTTHHHHH------------------HHHSC
T ss_pred hCCCCEEEEECCEEEhHHHHHHHhCCE--EEEcCCCEEECcccccCCCCCccHHHHH------------------HHHcC
Confidence 468899999999999999999999998 999999999876665443 2222111 11112
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
...-.+++-....++++||+++||||+|++..
T Consensus 159 --~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~~~ 190 (267)
T 3r9t_A 159 --RKVAMRLLLTGEPLSAAAARDWGLINEVVEAG 190 (267)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSSSEEECTT
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEEcChh
Confidence 23344455556789999999999999998753
No 57
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=98.13 E-value=2.1e-06 Score=63.26 Aligned_cols=88 Identities=11% Similarity=0.001 Sum_probs=64.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-+ .+..|
T Consensus 102 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~r~vG 161 (264)
T 1wz8_A 102 NFPRPVVAAVEKVAVGAGLALALAADI--AVVGKGTRLLDGHLRLGVAAGDHAVLLW------------------PLLVG 161 (264)
T ss_dssp HSSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTSCCTTTHHHHT------------------HHHHC
T ss_pred cCCCCEEEEECCeeechhHHHHHhCCE--EEecCCCEEeCchhhcCcCCCccHHHHH------------------HHHhC
Confidence 468899999999999999999999998 999999998876655442 2222211 11112
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 162 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 192 (264)
T 1wz8_A 162 --MAKAKYHLLLNEPLTGEEAERLGLVALAVED 192 (264)
T ss_dssp --HHHHHHHHHHTCCEEHHHHHHHTSSSEEECG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCceeecCh
Confidence 2233444445567999999999999999864
No 58
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=98.13 E-value=3.7e-06 Score=62.84 Aligned_cols=90 Identities=18% Similarity=0.128 Sum_probs=66.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|..+. --. ..+.+. ...
T Consensus 117 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~lGl~~~-g~~---------------~~L~r~--vG~ 176 (286)
T 3myb_A 117 RLPAPVIARVHGIATAAGCQLVAMCDL--AVATRDARFAVSGINVGLFCS-TPG---------------VALSRN--VGR 176 (286)
T ss_dssp HSSSCEEEEECSCEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCH-HHH---------------HHHTTT--SCH
T ss_pred cCCCCEEEEECCeehHHHHHHHHhCCE--EEEcCCCEEECcccccCCCCc-hHH---------------HHHHHH--cCH
Confidence 468899999999999999999999998 999999998877666554421 110 011111 223
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
..-.+++-....++++||+++||||+|++.
T Consensus 177 ~~A~~llltG~~i~A~eA~~~GLv~~vv~~ 206 (286)
T 3myb_A 177 KAAFEMLVTGEFVSADDAKGLGLVNRVVAP 206 (286)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCcEecCH
Confidence 344555555667999999999999999864
No 59
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=98.13 E-value=5.5e-06 Score=61.15 Aligned_cols=89 Identities=13% Similarity=0.075 Sum_probs=64.6
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-+.. ..|
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r------------------~vG 158 (262)
T 3r9q_A 99 RLSKPVIAAISGHAVAGGIELALWCDL--RVVEEDAVLGVFCRRWGVPLIDGGTIRLPR------------------LIG 158 (262)
T ss_dssp CCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECTHHHHTCCCCSSHHHHHHH------------------HHC
T ss_pred hCCCCEEEEECCeeehhhhHHHHhCCE--EEEeCCCEEecchhccCCCCCccHHHHHHH------------------HhC
Confidence 467899999999999999999999998 999999998765544332 222222211 111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
...-.+++-....++++||+++||||+|++..
T Consensus 159 --~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~ 190 (262)
T 3r9q_A 159 --HSRAMDLILTGRPVHANEALDIGLVNRVVARG 190 (262)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT
T ss_pred --HHHHHHHHHcCCcCCHHHHHHcCCccEecChh
Confidence 22333444455689999999999999998753
No 60
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=98.13 E-value=8.2e-06 Score=60.26 Aligned_cols=87 Identities=13% Similarity=0.043 Sum_probs=65.0
Q ss_pred CCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy5228 5 KPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTGHS 81 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s 81 (114)
+.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|-..-+.. .. .
T Consensus 102 ~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~------------------~v--G 159 (265)
T 3qxi_A 102 AKPLIAAVEGYALAGGTELALATDL--IVAARDSAFGIPEVKRGLVAGGGGLLRLPE------------------RI--P 159 (265)
T ss_dssp SSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSHHHHHHH------------------HS--C
T ss_pred CCCEEEEECCceeHHHHHHHHhCCE--EEEcCCCEEECcccccCcCCcccHHHHHHH------------------Hh--C
Confidence 6799999999999999999999998 999999998877665443 222222211 11 2
Q ss_pred HHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 82 VKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 82 ~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
...-.+++-....++++||+++||||+|++..
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 3qxi_A 160 YAIAMELALTGDNLSAERAHALGMVNVLAEPG 191 (265)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT
T ss_pred HHHHHHHHHcCCCcCHHHHHHCCCccEeeChh
Confidence 33334555566789999999999999998753
No 61
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=98.12 E-value=4.7e-06 Score=62.33 Aligned_cols=88 Identities=15% Similarity=0.056 Sum_probs=63.8
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC-C---CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA-Q---GQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~-~---G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. - |-..-+.. ..
T Consensus 121 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r------------------~v 180 (290)
T 3sll_A 121 RMHQPVIAAINGAAIGGGLCLALACDV--RVASQDAYFRAAGINNGLTASELGLSYLLPR------------------AI 180 (290)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECTTTTTTSCSCCTTHHHHHHH------------------HH
T ss_pred hCCCCEEEEECCeehHHHHHHHHHCCE--EEEeCCCEEECchhccCcCCCcccHHHHHHH------------------Hh
Confidence 468899999999999999999999998 999999998776555442 1 22222211 11
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 181 G--~~~A~~llltG~~i~A~eA~~~GLV~~vv~~ 212 (290)
T 3sll_A 181 G--TSRASDIMLTGRDVDADEAERIGLVSRKVAS 212 (290)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCccEEeCh
Confidence 1 2223344444567999999999999999875
No 62
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=98.12 E-value=2.3e-06 Score=63.46 Aligned_cols=88 Identities=14% Similarity=0.063 Sum_probs=64.6
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-+... .|
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~------------------vG 164 (272)
T 3qk8_A 105 NLDKPVVSAIRGPAVGAGLVVALLADI--SVASATAKIIDGHTKLGVAAGDHAAICWPLL------------------VG 164 (272)
T ss_dssp TCCSCEEEEECSEEEHHHHHHHHHSSE--EEEETTCEEECCHHHHTSCSCSSHHHHTHHH------------------HC
T ss_pred hCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECchhccCCCCCccHHHHHHHH------------------hC
Confidence 568899999999999999999999998 999999998876655442 2222222111 11
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 165 --~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~ 195 (272)
T 3qk8_A 165 --MAKAKYYLLTCETLSGEEAERIGLVSTCVDD 195 (272)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCCcEeeCH
Confidence 2223344445568999999999999999875
No 63
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=98.11 E-value=3.5e-06 Score=61.50 Aligned_cols=88 Identities=11% Similarity=-0.078 Sum_probs=63.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-....|. .|...-+ .+..|
T Consensus 88 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~~~vG 147 (243)
T 2q35_A 88 DCEIPIIAAMQGHSFGGGLLLGLYADF--VVFSQESVYATNFMKYGFTPVGATSLIL------------------REKLG 147 (243)
T ss_dssp TCCSCEEEEECSEEETHHHHHHHTSSE--EEEESSSEEECCHHHHTSCCCSSHHHHH------------------HHHHC
T ss_pred hCCCCEEEEEcCccccchHHHHHhCCE--EEEeCCCEEECCccccCCCCcchHHHHH------------------HHHhC
Confidence 468899999999999999999999998 999999998776554442 2222111 11112
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 148 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 178 (243)
T 2q35_A 148 --SELAQEMIYTGENYRGKELAERGIPFPVVSR 178 (243)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTCSSCEECH
T ss_pred --HHHHHHHHHcCCCCCHHHHHHcCCCCEecCh
Confidence 2223344445567999999999999999864
No 64
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=98.10 E-value=3.8e-06 Score=62.19 Aligned_cols=91 Identities=15% Similarity=0.058 Sum_probs=64.2
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHS 81 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s 81 (114)
..++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|..- .-- ...+.+..|
T Consensus 107 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p-~g~---------------~~~L~r~vG-- 166 (274)
T 3tlf_A 107 RTMAKPVLTAVNGICCGAGMDWVTTTDI--VIASEQATFFDPHVSIGLVA-GRE---------------LVRVSRVLP-- 166 (274)
T ss_dssp TSCCSCEEEEECSEEEGGGHHHHHHSSE--EEEETTCEEECCGGGGTCCC-CHH---------------HHHHTTTSC--
T ss_pred HhCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECcccccCccc-chH---------------HHHHHHHhC--
Confidence 4567899999999999999999999998 99999999887665544321 100 111122222
Q ss_pred HHHHHhhhcCCc--eecHHHHHHcCcceeeccc
Q psy5228 82 VKKISQDTDRDN--FMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 82 ~~~i~~~m~~~~--~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-... .++++||+++||||+|++.
T Consensus 167 ~~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~ 199 (274)
T 3tlf_A 167 RSIALRMALMGKHERMSAQRAYELGLISEIVEH 199 (274)
T ss_dssp HHHHHHHHHHGGGCCEEHHHHHHHTSSSEEECG
T ss_pred HHHHHHHHHcCCCCccCHHHHHHCCCCCeecCH
Confidence 222333333334 8999999999999999865
No 65
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=98.09 E-value=5.4e-06 Score=61.59 Aligned_cols=88 Identities=15% Similarity=0.056 Sum_probs=64.9
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEec-CCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSL-PNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~-p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++. ++++|.+-....|. .|-..-+ .+..
T Consensus 110 ~~~kPvIAav~G~a~GgG~~LalacD~--~ia~~~~a~f~~pe~~lGl~p~~g~~~~l------------------~r~v 169 (280)
T 1pjh_A 110 KHSKVLICCLNGPAIGLSAALVALCDI--VYSINDKVYLLYPFANLGLITEGGTTVSL------------------PLKF 169 (280)
T ss_dssp HCCSEEEEEECSCEEHHHHHHHHHSSE--EEESSTTCEEECCHHHHTCCCCTTHHHHH------------------HHHH
T ss_pred hCCCCEEEEECCeeeeHHHHHHHHCCE--EEEeCCCCEEeCchhhcCCCCCccHHHHH------------------HHHh
Confidence 457899999999999999999999998 9999 99998876655442 2222211 1122
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 170 G--~~~A~~llltg~~~~a~eA~~~GLv~~vv~~ 201 (280)
T 1pjh_A 170 G--TNTTYECLMFNKPFKYDIMCENGFISKNFNM 201 (280)
T ss_dssp C--HHHHHHHHHTTCCEEHHHHHHTTCCSEECCC
T ss_pred C--HHHHHHHHHhCCCCCHHHHHHCCCcceeeCC
Confidence 2 2333445555677999999999999999865
No 66
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=98.08 E-value=6.2e-06 Score=61.10 Aligned_cols=90 Identities=17% Similarity=0.064 Sum_probs=63.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+.|.|.+.|.-|+++||. |++.++++|.+-...-|.....--. ..+.+..| .
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~---------------~~L~r~vG--~ 165 (264)
T 3he2_A 105 ASPMPVVGAINGPAIGAGLQLAMQCDL--RVVAPDAFFQFPTSKYGLALDNWSI---------------RRLSSLVG--H 165 (264)
T ss_dssp HCSSCEEEEECSCEETHHHHHHHHSSE--EEECTTCEEECTHHHHTCCCCHHHH---------------HHHHHHHC--H
T ss_pred hCCCCEEEEECCcEEcchhHHHHhCCE--EEEcCCCEEECcccccCcCCcchHH---------------HHHHHHhC--H
Confidence 468899999999999999999999998 9999999987655544432221100 01111112 2
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeecc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILK 111 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~ 111 (114)
..-.+++-....++++||+++||||+|.+
T Consensus 166 ~~A~~llltG~~i~A~eA~~~GLV~~v~~ 194 (264)
T 3he2_A 166 GRARAMLLSAEKLTAEIALHTGMANRIGT 194 (264)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEECC
T ss_pred HHHHHHHHcCCCccHHHHHHCCCeEEEec
Confidence 23334555567899999999999999964
No 67
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=98.07 E-value=5.2e-06 Score=63.28 Aligned_cols=87 Identities=8% Similarity=0.033 Sum_probs=65.4
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCcc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGG-AQGQASDIEIQAREILYLRQRLNEILSEKTGHS 81 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~-~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s 81 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-....+ +-+.. + +.++.|
T Consensus 155 ~~~kPvIAaV~G~a~GgG~~LalacD~--rias~~a~f~~pe~~lG~~P~~g--~-----------------l~~~vG-- 211 (333)
T 3njd_A 155 HCDKPTVVKIHGYCVAGGTDIALHADQ--VIAAADAKIGYPPMRVWGVPAAG--L-----------------WAHRLG-- 211 (333)
T ss_dssp HSSSCEEEEECSEEETHHHHHHTTSSE--EEECTTCEEECGGGGTTCCCTTC--C-----------------HHHHHC--
T ss_pred hCCCCEEEEECCEEeHHHHHHHHhCCE--EEECCCCeeechhhceeccCHHH--H-----------------HHHHHH--
Confidence 368899999999999999999999998 99999999887665532 21111 0 111122
Q ss_pred HHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 82 VKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 82 ~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|+..
T Consensus 212 ~~~A~ellltG~~i~A~eA~~~GLV~~vv~~ 242 (333)
T 3njd_A 212 DQRAKRLLFTGDCITGAQAAEWGLAVEAPDP 242 (333)
T ss_dssp HHHHHHHHTTCCEEEHHHHHHTTSSSBCCCG
T ss_pred HHHHHHHHhcCCCCCHHHHHHCCCccEecCh
Confidence 3444556667788999999999999999864
No 68
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=98.07 E-value=2.4e-06 Score=63.48 Aligned_cols=88 Identities=18% Similarity=0.045 Sum_probs=63.2
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCcc-C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGG-A--QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~-~--~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-.+.-| . .|-..-+.. ..|
T Consensus 107 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r------------------~vG 166 (275)
T 4eml_A 107 SMPKVVIALVAGYAIGGGHVLHLVCDL--TIAADNAIFGQTGPKVGSFDGGFGSSYLAR------------------IVG 166 (275)
T ss_dssp HSSSEEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCSTTTHHHHH------------------HHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECcccccCCCCCccHHHHHHH------------------HhH
Confidence 468899999999999999999999998 99999999887555434 1 111222211 111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 167 --~~~A~~llltg~~i~A~eA~~~GLv~~vv~~ 197 (275)
T 4eml_A 167 --QKKAREIWYLCRQYSAQEAERMGMVNTVVPV 197 (275)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred --HHHHHHHHHhCCCcCHHHHHHcCCccEeeCH
Confidence 1222344444566999999999999999875
No 69
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=98.07 E-value=8.3e-06 Score=62.38 Aligned_cols=88 Identities=15% Similarity=0.038 Sum_probs=65.1
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEec-CCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSL-PNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~-p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++. ++++|.+-....|. .|-..-|....-
T Consensus 165 ~~~kPvIAaV~G~A~GgG~~LalacD~--riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r~vG----------------- 225 (334)
T 3t8b_A 165 FMPKVVICLVNGWAAGGGHSLHVVCDL--TLASREYARFKQTDADVGSFDGGYGSAYLARQVG----------------- 225 (334)
T ss_dssp HSSSEEEEEECSEEETHHHHHHHHSSE--EEEETTTCEEECCCTTCSSSSCCSCHHHHHHHHH-----------------
T ss_pred hCCCCEEEEECCccccCcchhHhhCCE--EEEeCCCcEEECcccccCCCCcccHHHHHHHHhh-----------------
Confidence 468899999999999999999999998 9999 99999887776553 233333321111
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 226 ---~~~A~ellltG~~i~A~eA~~~GLV~~vv~~ 256 (334)
T 3t8b_A 226 ---QKFAREIFFLGRTYTAEQMHQMGAVNAVAEH 256 (334)
T ss_dssp ---HHHHHHHHHHCCEEEHHHHHHHTSCSEEECG
T ss_pred ---HHHHHHHHHhCCcCCHHHHHHCCCCcEecCH
Confidence 1112233334567999999999999999875
No 70
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.05 E-value=3.7e-06 Score=61.83 Aligned_cols=91 Identities=8% Similarity=0.023 Sum_probs=64.0
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-....|..-..-- ...+.+.. ..
T Consensus 94 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~---------------~~~l~r~v--G~ 154 (261)
T 1ef8_A 94 KFPKPIISMVEGSVWGGAFEMIMSSDL--IIAASTSTFSMTPVNLGVPYNLVG---------------IHNLTRDA--GF 154 (261)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCHHH---------------HHTTSSSS--CH
T ss_pred hCCCCEEEEECCEEEeHhHHHHHhCCE--EEecCCCEEeCchhccCCCCCccH---------------HHHHHHHh--CH
Confidence 468899999999999999999999998 999999998765544343211000 00011112 23
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
..-.+++-....++++||+++||||+|++.
T Consensus 155 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 184 (261)
T 1ef8_A 155 HIVKELIFTASPITAQRALAVGILNHVVEV 184 (261)
T ss_dssp HHHHHHHHHCCCEEHHHHHHTTSCSEEECH
T ss_pred HHHHHHHHcCCccCHHHHHHCCCcccccCH
Confidence 344445545668999999999999999853
No 71
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=98.05 E-value=5e-06 Score=61.58 Aligned_cols=88 Identities=14% Similarity=0.018 Sum_probs=64.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC-CC-HHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ-GQ-ASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~-G~-~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|.. +- ..-+ - +..
T Consensus 98 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~l-------~-----------r~v-- 155 (267)
T 3hp0_A 98 TGPYVTISHVRGKVNAGGLGFVSATDI--AIADQTASFSLSELLFGLYPACVLPFL-------I-----------RRI-- 155 (267)
T ss_dssp HSSSEEEEEECSEEETTHHHHHHHSSE--EEECTTCEEECCGGGGTCCCTTTHHHH-------H-----------HHH--
T ss_pred cCCCCEEEEECCEEeehHHHHHHhCCE--EEEcCCCEEECchhccCcCchhHHHHH-------H-----------HHh--
Confidence 468899999999999999999999998 9999999988766665532 11 1111 1 111
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
....-.+++-....++++||+++||||+|+++
T Consensus 156 G~~~A~ellltg~~i~A~eA~~~GLV~~vv~~ 187 (267)
T 3hp0_A 156 GRQKAHYMTLMTKPISVQEASEWGLIDAFDAE 187 (267)
T ss_dssp CHHHHHHHHHHCCCBCHHHHHHHTSSSCBCSC
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCcceecCC
Confidence 12233344445568999999999999999864
No 72
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=98.04 E-value=3.9e-06 Score=61.99 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=62.9
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|...-+.... |
T Consensus 98 ~~~kPvIAav~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~v------------------G 157 (269)
T 1nzy_A 98 RVKRPVLAAINGVAAGGGLGISLASDM--AICADSAKFVCAWHTIGIGNDTATSYSLARIV------------------G 157 (269)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCTTHHHHHHHHH------------------H
T ss_pred hCCCCEEEEECCeeecHHHHHHHhCCE--EEecCCCEEeCcccccCCCCCccHHHHHHHHh------------------h
Confidence 468899999999999999999999998 999999998876655442 22222221111 1
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 158 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 188 (269)
T 1nzy_A 158 --MRRAMELMLTNRTLYPEEAKDWGLVSRVYPK 188 (269)
T ss_dssp --HHHHHHHHHHCCCBCHHHHHHHTSCSCEECH
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEeeCH
Confidence 1122233334566999999999999999864
No 73
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=98.02 E-value=9.7e-06 Score=61.06 Aligned_cols=88 Identities=16% Similarity=0.092 Sum_probs=64.9
Q ss_pred cCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTGH 80 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~ 80 (114)
++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-....|. .|-..-+ .+..
T Consensus 139 ~~kPvIAaV~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~v-- 196 (305)
T 3m6n_A 139 ARAHSIALVQGNALGGGFEAALSCHT--IIAEEGVMMGLPEVLFDLFPGMGAYSFM------------------CQRI-- 196 (305)
T ss_dssp TTCEEEEEECSCEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSHHHHH------------------TTTS--
T ss_pred CCCCEEEEECCEeehHHHHHHHhCCE--EEEcCCCEEECchhccCcCCCccHHHHH------------------HHHh--
Confidence 58899999999999999999999998 999999998876665443 2222111 1111
Q ss_pred CHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 81 SVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 81 s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
....-.+++-....++++||+++||||+|++..
T Consensus 197 G~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~ 229 (305)
T 3m6n_A 197 SAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRG 229 (305)
T ss_dssp CHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTT
T ss_pred cHHHHHHHHHcCCCCCHHHHHHCCCCCEecChh
Confidence 223334444455689999999999999998753
No 74
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=98.01 E-value=7.8e-06 Score=61.16 Aligned_cols=88 Identities=17% Similarity=0.174 Sum_probs=64.6
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecC-CceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLP-NSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p-~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.+ +++|.+-...-|. .|-..-+.. ..
T Consensus 104 ~~~kPvIAaV~G~a~GgG~~lalacD~--ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r------------------~v 163 (287)
T 3gkb_A 104 HQPQVTIVKLAGKARGGGAEFVAAADM--AFAAAETAGLGQIEALMGIIPGGGGTQYLRG------------------RV 163 (287)
T ss_dssp HCSSEEEEEECSEEETHHHHHHHHSSE--EEEETTTCEEECGGGGGTSCCCSSHHHHHHH------------------HH
T ss_pred hCCCCEEEEECCeeehHHHHHHHHCCE--EEEeCCCcEEECcccccCCCCCchHHHHHHH------------------Hh
Confidence 468899999999999999999999998 99999 9998876666443 222222211 11
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 164 G--~~~A~ellltG~~i~A~eA~~~GLV~~vv~~ 195 (287)
T 3gkb_A 164 G--RNRALEVVLTADLFDAETAASYGWINRALPA 195 (287)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECH
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCCcEEeCh
Confidence 1 2222344445567999999999999999864
No 75
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=98.00 E-value=1e-05 Score=59.56 Aligned_cols=87 Identities=11% Similarity=0.082 Sum_probs=62.3
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeee-ecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMI-HQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~mi-H~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|.+ |.-|+++||. |++.++++|.. -...-|. .|-..- +.+..
T Consensus 106 ~~~kPvIAav~G~a~G-G~~LalacD~--ria~~~a~f~~~pe~~lGl~p~~g~~~~------------------l~r~v 164 (257)
T 1szo_A 106 SIEVPVIAAVNGPVTN-APEIPVMSDI--VLAAESATFQDGPHFPSGIVPGDGAHVV------------------WPHVL 164 (257)
T ss_dssp HCCSCEEEEECSCBCS-STHHHHTSSE--EEEETTCEEECTTSGGGTCCCTTTHHHH------------------HHHHH
T ss_pred cCCCcEEEEECCchHH-HHHHHHHCCE--EEEeCCCEEecCcccccccCCCccHHHH------------------HHHHc
Confidence 4678999999999995 8999999998 99999999876 4444332 122111 11122
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 165 G--~~~A~~llltG~~~~A~eA~~~GLv~~vv~~ 196 (257)
T 1szo_A 165 G--SNRGRYFLLTGQELDARTALDYGAVNEVLSE 196 (257)
T ss_dssp C--HHHHHHHHHTTCEEEHHHHHHHTSCSEEECH
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence 2 2334455556678999999999999999863
No 76
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=98.00 E-value=6.7e-06 Score=61.55 Aligned_cols=87 Identities=20% Similarity=0.108 Sum_probs=63.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCcc-C---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGG-A---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~-~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-.+..| . .| ..-+.. ..
T Consensus 121 ~~~kPvIAaV~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~~~~~g-~~~L~r------------------~v 179 (289)
T 3t89_A 121 TCPKPVVAMVAGYSIGGGHVLHMMCDL--TIAADNAIFGQTGPKVGSFDGGWG-ASYMAR------------------IV 179 (289)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCSTT-THHHHH------------------HH
T ss_pred cCCCCEEEEECCEeehHHHHHHHhCCE--EEEeCCCEEeccccccCCCCCchH-HHHHHH------------------hc
Confidence 468899999999999999999999998 99999999987655544 2 22 222211 11
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 180 G--~~~A~~llltG~~i~A~eA~~~GLV~~vv~~ 211 (289)
T 3t89_A 180 G--QKKAREIWFLCRQYDAKQALDMGLVNTVVPL 211 (289)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred C--HHHHHHHHHcCCcccHHHHHHCCCceEeeCH
Confidence 1 2223333334456999999999999999875
No 77
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=97.97 E-value=8.5e-06 Score=62.77 Aligned_cols=87 Identities=10% Similarity=0.004 Sum_probs=64.9
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+.|.|.+.|.-|+++||- |++.++++|.+-....|.. |-..-+ .+..|
T Consensus 100 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~~g 159 (363)
T 3bpt_A 100 SCQKPYVALIHGITMGGGVGLSVHGQF--RVATEKCLFAMPETAIGLFPDVGGGYFL------------------PRLQG 159 (363)
T ss_dssp TCSSCEEEEECSEEETHHHHTTTTSSE--EEECTTCEEECCGGGTTSCCCTTHHHHH------------------HHSST
T ss_pred hCCCCEEEEECCEEehHHHHHHHhCCE--EEEcCCeEEeCCccccCCCCCchHHHHH------------------HHhhH
Confidence 468899999999999999999999998 9999999998877665532 222222 11122
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
. .-.+++-....++++||+++||||+|++.
T Consensus 160 ~---~a~~l~ltg~~i~A~eA~~~GLv~~vv~~ 189 (363)
T 3bpt_A 160 K---LGYFLALTGFRLKGRDVYRAGIATHFVDS 189 (363)
T ss_dssp T---HHHHHHHHCCCEETHHHHHTTSCSEECCG
T ss_pred H---HHHHHHHcCCCCCHHHHHHCCCcceecCH
Confidence 1 22334445577999999999999999865
No 78
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=97.96 E-value=7e-06 Score=63.06 Aligned_cols=81 Identities=23% Similarity=0.180 Sum_probs=56.0
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
..+.|+.+++.|.|.|.|+.++++|+. ++|.|++.+.+=.|.+. ++-+ -... ...
T Consensus 210 ~~~vPvIavV~G~a~GGGa~~~~~~D~--via~p~A~~~v~~Peg~----asil------------------~~~~-~~~ 264 (339)
T 2f9y_A 210 RLGVPVVCTVIGEGGSGGALAIGVGDK--VNMLQYSTYSVISPEGC----ASIL------------------WKSA-DKA 264 (339)
T ss_dssp TCSSCEEEEEEEEEEHHHHHTTCCCSE--EEECTTCEEESSCHHHH----HHHH------------------SSCS-TTH
T ss_pred hCCCCEEEEEeCCcCcHHHHHHhccCe--eeecCCCEEEeeccchH----HHHH------------------HHhh-ccH
Confidence 357899999999999999999999987 99999999886333221 0000 0000 000
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
.+..+. ..+||++|+++|+||+|++.
T Consensus 265 ~~Aae~----~~itA~~a~~~GlVd~VV~e 290 (339)
T 2f9y_A 265 PLAAEA----MGIIRPRLKELKLIDSIIPE 290 (339)
T ss_dssp HHHHHH----HTCSHHHHHTTTSCSCCCCC
T ss_pred HHHHHH----cCCCHHHHHHcCCeeEEecC
Confidence 111122 56999999999999999973
No 79
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=97.96 E-value=7.1e-06 Score=61.43 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=64.0
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCC-ceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPN-SRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEK 77 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~-s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~ 77 (114)
..++.||.+.+-|.|.+.|.-|+++||- |++.++ ++|.+-...-|. .|-..-+.. .
T Consensus 100 ~~~~kPvIAaV~G~a~GgG~~LalacD~--ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r------------------~ 159 (289)
T 3h0u_A 100 SQLPAVTIAKLRGRARGAGSEFLLACDM--RFASRENAILGQPEVGIGAPPGAGAIQHLTR------------------L 159 (289)
T ss_dssp HTCSSEEEEEECSEEETHHHHHHHHSSE--EEEETTTCEEECTHHHHTSCCCSSHHHHHHH------------------H
T ss_pred HhCCCCEEEEECCEeehhhHHHHHhCCE--EEEeCCCcEEeCchhhcCCCCCccHHHHHHH------------------H
Confidence 3568899999999999999999999998 999998 988876555442 222222211 1
Q ss_pred hCCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 78 TGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 78 tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
.| ...-.+++-....++++||+++||||+|++.
T Consensus 160 vG--~~~A~ellltG~~i~A~eA~~~GLV~~vv~~ 192 (289)
T 3h0u_A 160 LG--RGRALEAVLTSSDFDADLAERYGWVNRAVPD 192 (289)
T ss_dssp HC--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECH
T ss_pred hC--HHHHHHHHHcCCCCCHHHHHHCCCccEecCH
Confidence 11 2223344444566999999999999999864
No 80
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.95 E-value=9.4e-06 Score=62.05 Aligned_cols=80 Identities=23% Similarity=0.231 Sum_probs=55.8
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
..+.|+.+++.|.|.|.|+.++++|+. ++|.|++.+.+=.|.+. +.-+.... ...
T Consensus 196 ~~~vPvIavV~G~a~GGGa~~~~~~D~--via~~~A~~~v~~peg~----a~il~~~~---~~a---------------- 250 (327)
T 2f9i_A 196 SLKVPVIAIVIGEGGSGGALGIGIANK--VLMLENSTYSVISPEGA----AALLWKDS---NLA---------------- 250 (327)
T ss_dssp TCSSCEEEEEEEEEBHHHHHTTCCCSE--EEEETTCBCBSSCHHHH----HHHHSSCG---GGH----------------
T ss_pred hCCCCEEEEEECCcChHHHHHHHCCCE--EEEcCCceEeecCchHH----HHHHHHHh---cch----------------
Confidence 357899999999999999999999988 99999999886433321 00000000 000
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeecc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILK 111 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~ 111 (114)
.+..+. .++||++|+++|+||+|++
T Consensus 251 ~~A~e~----~~itA~~a~~~GlVd~VV~ 275 (327)
T 2f9i_A 251 KIAAET----MKITAHDIKQLGIIDDVIS 275 (327)
T ss_dssp HHHHHH----HTCBHHHHHHTTSSSEEEC
T ss_pred HHHHHH----cCCCHHHHHHcCCceEEec
Confidence 011111 5699999999999999997
No 81
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=97.94 E-value=7e-06 Score=61.04 Aligned_cols=86 Identities=17% Similarity=0.100 Sum_probs=63.6
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|...-+ .+..
T Consensus 120 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~v- 178 (276)
T 3rrv_A 120 RCRIPVVAAVNGPAVGLGCSLVALSDI--VYIAENAYLADPHVQVGLVAADGGPLTW------------------PLHI- 178 (276)
T ss_dssp HCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECCHHHHTCCCCSSHHHHG------------------GGTS-
T ss_pred hCCCCEEEEECceeeHHHHHHHHHCCE--EEEeCCCEEECchhccCcCCCccHHHHH------------------HHHh-
Confidence 468899999999999999999999998 999999998765544332 2222111 1111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeec
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKIL 110 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii 110 (114)
....-.+++-....++++||+++||||+|+
T Consensus 179 -G~~~A~ellltG~~i~A~eA~~~GLv~~vv 208 (276)
T 3rrv_A 179 -SLLLAKEYALTGTRISAQRAVELGLANHVA 208 (276)
T ss_dssp -CHHHHHHHHHHCCCEEHHHHHHHTSCSEEE
T ss_pred -CHHHHHHHHHcCCCCCHHHHHHcCCHHHHH
Confidence 233444555566789999999999999997
No 82
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=97.94 E-value=9.5e-06 Score=59.81 Aligned_cols=84 Identities=18% Similarity=0.043 Sum_probs=63.1
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|.. |...- +. +
T Consensus 106 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~------------------l~-~-- 162 (267)
T 3oc7_A 106 ESRLPVIAAIDGHVRAGGFGLVGACDI--AVAGPRSSFALTEARIGVAPAIISLTL------------------LP-K-- 162 (267)
T ss_dssp HCSSCEEEEECSEEETTHHHHHHHSSE--EEECTTCEEECCGGGGTCCCTTTHHHH------------------TT-T--
T ss_pred hCCCCEEEEEcCeecccchHHHHHCCE--EEEcCCCEEeCcccccCCCcchhHHHH------------------HH-H--
Confidence 468899999999999999999999998 9999999988766554432 22111 11 1
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceee
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKI 109 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~I 109 (114)
.....-.+++-....++++||+++||||+|
T Consensus 163 vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v 192 (267)
T 3oc7_A 163 LSARAAARYYLTGEKFDARRAEEIGLITMA 192 (267)
T ss_dssp SCHHHHHHHHHHCCCBCHHHHHHHTSSSEE
T ss_pred hCHHHHHHHHHcCCccCHHHHHHCCChhhh
Confidence 233344555555678999999999999999
No 83
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=97.91 E-value=1.4e-05 Score=61.51 Aligned_cols=88 Identities=13% Similarity=0.032 Sum_probs=62.8
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+.|.|.+.|.-|+++||- |++.++++|.+-...-|. .|...-+.. + -|
T Consensus 103 ~~~kPvIAav~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~iGl~p~~g~~~~l~r-------l-----------~g 162 (353)
T 4hdt_A 103 RYPKPYVSIMDGIVMGGGVGVGAHGNV--RVVTDTTKMAMPEVGIGFIPDVGGTYLLSR-------A-----------PG 162 (353)
T ss_dssp HCSSCEEEEECBEEETHHHHHHTTSSE--EEECTTCEEECCGGGGTCCCCTTHHHHHHT-------S-----------ST
T ss_pred HCCCCEEEEeECceeecCccccCCcCe--eccchhccccCcccccccCCCccceehhhh-------h-----------hh
Confidence 468899999999999999999999998 999999999876655443 222221111 0 11
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
. .-.+++-....++++||+++||||+|+...
T Consensus 163 -~--~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 193 (353)
T 4hdt_A 163 -K--LGLHAALTGAPFSGADAIVMGFADHYVPHD 193 (353)
T ss_dssp -T--HHHHHHHHCCCBCHHHHHHHTSCSEECCGG
T ss_pred -H--HHHHHHhcCCCCCHHHHHHcCCCcEEeCHH
Confidence 0 112222234579999999999999998753
No 84
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=97.89 E-value=4.9e-06 Score=61.90 Aligned_cols=89 Identities=10% Similarity=0.005 Sum_probs=63.1
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSV 82 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~ 82 (114)
.++.||.+.+.|.|.+.|.-|+++||- |++.++++|.+-...-|..|...-.. .. .. ..
T Consensus 115 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~~~~~~~~--~~---------------~v--G~ 173 (279)
T 3t3w_A 115 NVPKPSIAAVQGRCISGGLLLCWPCDL--IIAAEDALFSDPVVLMDIGGVEYHGH--TW---------------EL--GP 173 (279)
T ss_dssp HCSSCEEEEECSEEEGGGHHHHTTSSE--EEEETTCEEECCGGGGTCSSCSSCCH--HH---------------HH--CH
T ss_pred hCCCCEEEEECCeEhHHHHHHHHhCCE--EEecCCCEEeCcHHhcCCCCchHHHH--Hh---------------hc--CH
Confidence 468899999999999999999999998 99999999877655544322100000 00 01 12
Q ss_pred HHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 83 KKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 83 ~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
..-.+++-....++++||+++||||+|++.
T Consensus 174 ~~A~~llltG~~i~A~eA~~~GLv~~vv~~ 203 (279)
T 3t3w_A 174 RKAKEILFTGRAMTAEEVAQTGMVNRVVPR 203 (279)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred HHHHHHHHcCCccCHHHHHHCCCCcEeeCh
Confidence 222344444568999999999999999865
No 85
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=97.85 E-value=1.9e-05 Score=62.56 Aligned_cols=89 Identities=18% Similarity=0.119 Sum_probs=63.9
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ-GQASDIEIQAREILYLRQRLNEILSEKTGHS 81 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~-G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s 81 (114)
.++.||.+.+.|.|.+.|.-|+++||. |++.++++|.+-....|.. +-... .|-+. .|
T Consensus 282 ~~pkPvIAAVnG~A~GGG~eLALaCDi--rIAae~A~Fglpev~lGl~P~~g~~------~L~rl-----------vG-- 340 (440)
T 2np9_A 282 RIEKPWVAAVDGFAIGGGAQLLLVFDR--VLASSDAYFSLPAAKEGIIPGAANL------RLGRF-----------AG-- 340 (440)
T ss_dssp EECCCEEEEECSEEETHHHHHGGGCSE--EEEETTCEEECCCTTTCCCCTTHHH------HHHHH-----------HH--
T ss_pred cCCCCEEEEECCcccccchHHHhhCCE--EEEcCCCEEECchhccCcCcchHHH------HHHHH-----------hh--
Confidence 468899999999999999999999998 9999999998877765532 22111 11111 11
Q ss_pred HHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 82 VKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 82 ~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 341 ~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~ 371 (440)
T 2np9_A 341 PRVSRQVILEGRRIWAKEPEARLLVDEVVEP 371 (440)
T ss_dssp HHHHHHHHHHCCCEETTSGGGGGTCSEEECH
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCCcEecCh
Confidence 1122233334467999999999999999864
No 86
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=97.75 E-value=1.7e-05 Score=62.18 Aligned_cols=87 Identities=21% Similarity=0.088 Sum_probs=64.7
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGAQ---GQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~~---G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+.|.|.+.|.-|+++||- |++.++++|.+-...-|.. |-..-+ .+..|
T Consensus 140 ~~~kPvIAaVnG~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~P~~G~t~~L------------------~rl~g 199 (407)
T 3ju1_A 140 TYGKPVLVWGDGIVMGGGLGLMAGASH--KVVTETSRIAMPEVTIGLYPDVGGSYFL------------------NRMPG 199 (407)
T ss_dssp TCSSCEEEECCSEEETHHHHHHHHCSE--EEECTTCEEECGGGGGTCCSCTTHHHHT------------------TTSST
T ss_pred HCCCCEEEEECCccccCcchHHhcCCE--EEEcCCCEEeChHhhcCCCCCchHHHHH------------------hhhhH
Confidence 468899999999999999999999998 9999999998766655532 222111 11112
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
..-.+++-....++++||+++||||+|+..
T Consensus 200 ---~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~ 229 (407)
T 3ju1_A 200 ---KMGLFLGLTAYHMNAADACYVGLADHYLNR 229 (407)
T ss_dssp ---THHHHHHHHCCCBCHHHHHHHTSCSEECCG
T ss_pred ---HHHHHHHHcCCcCcHHHHHHCCCccEEcCH
Confidence 223344445577999999999999999875
No 87
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=97.72 E-value=7.3e-05 Score=62.25 Aligned_cols=89 Identities=18% Similarity=0.151 Sum_probs=64.6
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|-...+... .
T Consensus 99 ~~~~kPvIAav~G~a~GgG~elalacD~--ria~~~a~fglpev~lGl~P~~Ggt~~L~rl------------------v 158 (725)
T 2wtb_A 99 EAARKPSVAAIDGLALGGGLELAMACHA--RISAPAAQLGLPELQLGVIPGFGGTQRLPRL------------------V 158 (725)
T ss_dssp CTSSSCEEEEECSEEETHHHHHHHHSSE--EEECTTCEEECCGGGGTCCCCSSHHHHHHHH------------------H
T ss_pred HhCcCcEEEEECCccCcccHHHHHhCCE--EEEcCCCEEeCchhccCCCCCccHHHHHHHh------------------c
Confidence 4568899999999999999999999998 999999997776555443 2322222111 1
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 159 G--~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~ 190 (725)
T 2wtb_A 159 G--LTKALEMILTSKPVKAEEGHSLGLIDAVVPP 190 (725)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSCSEECCT
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCccceEcCh
Confidence 1 2222334444568999999999999999864
No 88
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=97.72 E-value=1.8e-05 Score=58.54 Aligned_cols=87 Identities=15% Similarity=0.065 Sum_probs=60.5
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeee-ecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMI-HQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~mi-H~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.++.||.+.+-|.|. .|.-|+++||. |++.++++|.. -...-|. .|-..-+.. . .
T Consensus 115 ~~~kPvIAav~G~a~-GG~~LalacD~--ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r----------~--------v 173 (263)
T 2j5g_A 115 DIEVPVISAVNGAAL-LHSEYILTTDI--ILASENTVFQDMPHLNAGIVPGDGVHILWPL----------A--------L 173 (263)
T ss_dssp TCCSCEEEEECSEEC-SCGGGGGGCSE--EEEETTCEECCCHHHHHTCCCCSSHHHHHHH----------H--------H
T ss_pred hCCCCEEEEECCcch-HHHHHHHhCCE--EEEcCCCEEecCcccccccCCCccHHHHHHH----------H--------c
Confidence 468899999999999 48889999998 99999999876 3333232 222222211 1 1
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 174 G--~~~A~~llltG~~~~A~eA~~~GLv~~vv~~ 205 (263)
T 2j5g_A 174 G--LYRGRYFLFTQEKLTAQQAYELNVVHEVLPQ 205 (263)
T ss_dssp H--HHHHHHHHHTTCCEEHHHHHHTTSCSEEECG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCccEecCh
Confidence 1 1223344445667999999999999999864
No 89
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=97.71 E-value=4.9e-05 Score=63.19 Aligned_cols=89 Identities=13% Similarity=0.091 Sum_probs=65.2
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
..++.||.+.+-|.|.+.|.-|+++||. |++.++++|.+-...-|. .|-..-+.. ..
T Consensus 100 ~~~~kPvIAav~G~a~GgG~elalacD~--ria~~~a~fglpev~lGl~P~~ggt~~L~r------------------~v 159 (715)
T 1wdk_A 100 EDLNVPTVAAINGIALGGGLEMCLAADF--RVMADSAKIGLPEVKLGIYPGFGGTVRLPR------------------LI 159 (715)
T ss_dssp HTCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECGGGGGTCCCCSSHHHHHHH------------------HH
T ss_pred HhCCCCEEEEECCEeeHHHHHHHHHCCE--EEEeCCCEEeChhhccCCCCCccHHHHHHH------------------Hh
Confidence 3568899999999999999999999998 999999998776665553 232222211 11
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
| ...-.+++-....++++||+++||||+|++.
T Consensus 160 G--~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~ 191 (715)
T 1wdk_A 160 G--VDNAVEWIASGKENRAEDALKVSAVDAVVTA 191 (715)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHTTSSSEEECG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence 1 2223344445568999999999999999864
No 90
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=97.54 E-value=0.00011 Score=59.59 Aligned_cols=91 Identities=13% Similarity=0.116 Sum_probs=66.5
Q ss_pred cccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCC--ceeeeecCC-ccC---CCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy5228 2 QFIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPN--SRIMIHQPL-GGA---QGQASDIEIQAREILYLRQRLNEILS 75 (114)
Q Consensus 2 ~~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~--s~~miH~p~-~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya 75 (114)
..++.||.+.+-|.|.+.|.-|+++||. |++.++ ++|.+-... -|. .|-..-+ .
T Consensus 126 ~~~pKPVIAAVnG~AlGGGleLALACD~--rIAse~~~A~FglPEv~~LGL~Pg~Ggt~rL------------------p 185 (556)
T 2w3p_A 126 RHSGLKFLAAVNGACAGGGYELALACDE--IYLVDDRSSSVSLPEVPLLGVLPGTGGLTRV------------------T 185 (556)
T ss_dssp HHTSCEEEEEECSEEETHHHHHHHHSSE--EEEECSSSCEEECCHHHHHSSCCTTTHHHHH------------------H
T ss_pred hcCCCCEEEEECCeechhhHHHHHhCCE--EEEcCCCCcEEecccccccCCCCCccHHHHH------------------H
Confidence 3568899999999999999999999998 999999 888775544 332 2222222 1
Q ss_pred HHhCCCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 76 EKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 76 ~~tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
.+--.....-.+++-....++++||+++||||+|++.
T Consensus 186 ~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~ 222 (556)
T 2w3p_A 186 DKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKP 222 (556)
T ss_dssp HTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECH
T ss_pred hhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence 0011234555566667778999999999999999863
No 91
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.48 E-value=0.00021 Score=59.84 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=64.4
Q ss_pred ccCCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCCccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy5228 3 FIKPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPLGGA---QGQASDIEIQAREILYLRQRLNEILSEKTG 79 (114)
Q Consensus 3 ~~~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~~~~---~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg 79 (114)
.++.||.+.+-|.|.+.|.-|+++||- |++.++++|.+-...-|. .|-..-|.. ..|
T Consensus 104 ~~~kPvIAai~G~a~GGG~elalacD~--ria~~~a~fg~pev~lGl~Pg~ggt~rL~r------------------lvG 163 (742)
T 3zwc_A 104 RYQKPVLAAIQGVALGGGLELALGCHY--RIANAKARVGLPEVTLGILPGARGTQLLPR------------------VVG 163 (742)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHTSSE--EEEETTCEEECGGGGGTCCCTTTHHHHHHH------------------HHC
T ss_pred hCCCCEEEEECccchHHHHHHHHhcCE--EEEcCCCEEECcccCcccCCCccHHHHHHH------------------hhh
Confidence 467899999999999999999999998 999999998776555442 222222211 111
Q ss_pred CCHHHHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 80 HSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 80 ~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
...-.+++-....++++||+++||||+|++.
T Consensus 164 --~~~A~~l~ltG~~i~a~eA~~~GLv~~vv~~ 194 (742)
T 3zwc_A 164 --VPVALDLITSGKYLSADEALRLGILDAVVKS 194 (742)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEESS
T ss_pred --HHHHHHHHHcCCchhHHHHHHcCCccEecCc
Confidence 2222344445678999999999999999865
No 92
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=97.09 E-value=0.00072 Score=54.86 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=58.8
Q ss_pred cCCCeEEEEehhhhhHHHHHHhc----CCCCcEEecCCceeeeecCCcc---CCCC-HHHHHHHHHHHHHHHHHHHHHHH
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLAS----GTKGKRFSLPNSRIMIHQPLGG---AQGQ-ASDIEIQAREILYLRQRLNEILS 75 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~a----g~~~~R~~~p~s~~miH~p~~~---~~G~-~~~l~~~~~~l~~~~~~~~~~ya 75 (114)
.+.|+.|+++|.++|.|.+.+++ ++. .++.|++.+.+-.|.+. .+.. ....+..-++....++.+.+.|.
T Consensus 419 ~~VP~isvI~g~~~Ggg~~am~~~~~~~d~--~~awp~a~i~Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~y~ 496 (548)
T 2bzr_A 419 ATVPKITVITRKAYGGAYCVMGSKDMGCDV--NLAWPTAQIAVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYE 496 (548)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTTCGGGTCSE--EEECTTCEEESSCHHHHHHHHTCCC----------CHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcchHHHHHhccccCCCCE--EEEcCCCEEEecCHHHHHHHHhhhHHhhhhcccccHHHHHHHHHHHHH
Confidence 46799999999999999888865 444 89999999999988743 1222 11110000122223333333343
Q ss_pred HHhCCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 76 EKTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 76 ~~tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
+ .+.+|..+.+.|+||.||+++
T Consensus 497 ~----------------~~~~p~~~a~~g~iD~II~p~ 518 (548)
T 2bzr_A 497 D----------------TLVNPYVAAERGYVGAVIPPS 518 (548)
T ss_dssp H----------------HHSBSHHHHHTTSSSEECCGG
T ss_pred H----------------hhCCHHHHHhcCCCceeeCHH
Confidence 2 345778899999999999864
No 93
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=96.89 E-value=0.00084 Score=54.22 Aligned_cols=91 Identities=19% Similarity=0.196 Sum_probs=56.4
Q ss_pred cCCCeEEEEehhhhhHHHHHHhc----CCCCcEEecCCceeeeecCCccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLAS----GTKGKRFSLPNSRIMIHQPLGGA-QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~a----g~~~~R~~~p~s~~miH~p~~~~-~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.+.|+.++++|.++|.|.+.+++ ++. .++.|+|.+-+=.|.+.. .-...+++. +++-...++.+.+.|.
T Consensus 402 ~~vP~isvI~g~~~gGg~~am~~~~~~~d~--~~a~p~a~~~Vm~pegaa~Il~r~~~~~-~~d~~~~~~~~~~~y~--- 475 (527)
T 1vrg_A 402 ATVPKITVILRKAYGGAYIAMGSKHLGADM--VLAWPSAEIAVMGPEGAANIIFKREIEA-SSNPEETRRKLIEEYK--- 475 (527)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTTCGGGTCSE--EEECTTCEEESSCHHHHHHHHTHHHHHH-SSCHHHHHHHHHHHHH---
T ss_pred CCCCEEEEEeCCcccHHHHHhcCCCCCCCE--EEEcCCCeEEecCHHHHHHHHhhhhhhc-ccCHHHHHHHHHHHHH---
Confidence 46799999999999998887765 554 889999888776665321 001111110 0011112222223332
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
+.+.+|..+.+.|+||+||+++
T Consensus 476 -------------~~~~~p~~~~~~g~iD~II~p~ 497 (527)
T 1vrg_A 476 -------------QQFANPYIAASRGYVDMVIDPR 497 (527)
T ss_dssp -------------HHTSSHHHHHHTTSSSEECCGG
T ss_pred -------------HhhCCHHHHHHcCCCCeeeCHH
Confidence 3346888999999999999864
No 94
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=96.82 E-value=0.00083 Score=54.22 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=56.8
Q ss_pred cCCCeEEEEehhhhhHHHHHHhc----CCCCcEEecCCceeeeecCCccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLAS----GTKGKRFSLPNSRIMIHQPLGGA-QGQASDIEIQAREILYLRQRLNEILSEKT 78 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~a----g~~~~R~~~p~s~~miH~p~~~~-~G~~~~l~~~~~~l~~~~~~~~~~ya~~t 78 (114)
.+.|+.|+++|.++|.|.+.+++ ++. .++.|++.+-+=.|.+.. .-...+++. +++....++.+.+.|.
T Consensus 398 ~~vP~itvI~g~~~Ggg~~am~~~~~~~d~--~~a~p~a~~~Vm~pegaa~Il~r~~~~~-~~d~~~~~~~~~~~y~--- 471 (523)
T 1on3_A 398 ATVPKITVVLRKAYGGSYLAMCNRDLGADA--VYAWPSAEIAVMGAEGAANVIFRKEIKA-ADDPDAMRAEKIEEYQ--- 471 (523)
T ss_dssp CCSCEEEEEEEEEEHHHHHTTTCGGGTCSE--EEECTTCEEESSCHHHHHHHHTHHHHHH-SSCHHHHHHHHHHHHH---
T ss_pred CCCCEEEEEeCCcccHHHHHhcccCCCCCE--EEEcCCCeEEecCHHHHHHHHhhhhhhc-ccCHHHHHHHHHHHHH---
Confidence 46799999999999998887766 444 889999888776665321 001111111 0111122222233332
Q ss_pred CCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 79 GHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 79 g~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
+.+.+|..+.+.|+||+||+++
T Consensus 472 -------------~~~~~p~~~a~~g~iD~II~p~ 493 (523)
T 1on3_A 472 -------------NAFNTPYVAAARGQVDDVIDPA 493 (523)
T ss_dssp -------------HHHSSHHHHHHTTSSSEECCGG
T ss_pred -------------HhhCCHHHHHhcCCCCEeeCHH
Confidence 2346788899999999999864
No 95
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=96.61 E-value=0.002 Score=48.57 Aligned_cols=72 Identities=13% Similarity=0.094 Sum_probs=52.7
Q ss_pred CCCeEEEEehhhhhHHHHH-HhcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Q psy5228 5 KPNVSTLCIGLAASMGAFL-LASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSVK 83 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i-~~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~~ 83 (114)
+.|+.+++.|-|++.|+.. .++|+. +++.|+|++.+--|+. +.+.+|..
T Consensus 191 ~vP~IavV~G~~~GGg~a~~a~~~D~--via~~~A~i~v~Gp~~--------------------------i~~~ig~~-- 240 (304)
T 2f9y_B 191 GLPYISVLTDPTMGGVSASFAMLGDL--NIAEPKALIGFAGPRV--------------------------IEQTVREK-- 240 (304)
T ss_dssp TCCEEEEEEEEEEHHHHTTGGGCCSE--EEECTTCBEESSCHHH--------------------------HHHHHTSC--
T ss_pred CCCEEEEEECCCccHHHHHHHhcCCE--EEEeCCcEEEeecHHH--------------------------HHHHhCcc--
Confidence 6899999999999998665 567887 9999999887753321 12222321
Q ss_pred HHHhhhcCCceecHHHHHHcCcceeeccc
Q psy5228 84 KISQDTDRDNFMSAKMAMEYCLIDKILKQ 112 (114)
Q Consensus 84 ~i~~~m~~~~~lta~eA~~~GliD~Ii~~ 112 (114)
+. +.+.+++++.+.|+||.|++.
T Consensus 241 -----l~-~~~~~Ae~~~~~Glvd~Vv~~ 263 (304)
T 2f9y_B 241 -----LP-PGFQRSEFLIEKGAIDMIVRR 263 (304)
T ss_dssp -----CC-TTTTBHHHHGGGTCCSEECCH
T ss_pred -----CC-cccCCHHHHHhcCCccEEeCc
Confidence 22 345699999999999999864
No 96
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=96.34 E-value=0.0059 Score=49.93 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=54.5
Q ss_pred cCCCeEEEEehhhhhHHHHHHhc----C--CCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLAS----G--TKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEK 77 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~a----g--~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~ 77 (114)
.+.|+.|+++|-+.|.|.+.+++ + +. .++.|++.+.+=.|.+.. .+. ..+++... ++
T Consensus 443 a~vP~itvI~g~~~Ggg~~am~~~~~~~~~d~--~~a~p~A~~~Vm~pegaa-----~Il-~r~~~~~~---------~~ 505 (587)
T 1pix_A 443 SHIPQFEITLRKGTAAAHYVLGGPQGNDTNAF--SIGTAATEIAVMNGETAA-----TAM-YSRRLAKD---------RK 505 (587)
T ss_dssp CCCCEEEEECSEEETTHHHHTTCTTCTTTEEE--EEECTTCEEESSCHHHHH-----HHH-HHHHHHHH---------HH
T ss_pred CCCCEEEEEcCCCccHHHHHhcCcccCcccce--eeeccCCeEecCCHHHHH-----HHH-Hhhhhhhh---------hh
Confidence 46799999999999998877765 3 33 788888888766554311 110 00111110 11
Q ss_pred hCCCHHHHH-------hhhcCCceecHHHHHHcCcceeecccC
Q psy5228 78 TGHSVKKIS-------QDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 78 tg~s~~~i~-------~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
.|.+.++.. +...+ ..+|..|.+.|+||.||++.
T Consensus 506 ~g~~~~~~~~~~~~~~~~y~~--~~~p~~aa~~g~iD~VI~p~ 546 (587)
T 1pix_A 506 AGKDLQPTIDKMNNLIQAFYT--KSRPKVCAELGLVDEIVDMN 546 (587)
T ss_dssp TTCCCHHHHHHHHHHHHHHHH--TTSHHHHHHHTSSSEECCTT
T ss_pred cCCChHHHHHHHHHHHHHHHH--hCCHHHHHhcCCCccccCHH
Confidence 122221111 11112 47999999999999999865
No 97
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=96.06 E-value=0.0012 Score=53.46 Aligned_cols=91 Identities=13% Similarity=0.140 Sum_probs=55.4
Q ss_pred cCCCeEEEEehhhhhHHHHHHhcC---CCCcEEecCCceeeeecCCcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLASG---TKGKRFSLPNSRIMIHQPLGG---AQGQASDIEIQAREILYLRQRLNEILSEK 77 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~ag---~~~~R~~~p~s~~miH~p~~~---~~G~~~~l~~~~~~l~~~~~~~~~~ya~~ 77 (114)
.+.|+.|+++|.+.|.|.+. +++ .....++.|++.+-+=.|.+. .+.+ +++...++-...++.+.+-|.+.
T Consensus 404 a~vP~itvI~g~~~GGa~~a-m~~~~~~~d~~~awp~a~~~Vm~~egaa~il~r~--~~~~~~~d~~~~~~~~~~~y~~~ 480 (530)
T 3iav_A 404 ATVPLITVITRKAFGGAYVV-MGSKHLGADLNLAWPTAQIAVMGAQGAVNILHRR--TIADAGDDAEATRARLIQEYEDA 480 (530)
T ss_dssp CCSCEEEEEEEEEEHHHHHH-TTCGGGTCSEEEECTTCEEESSCHHHHHHHHTST--TTSTTCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcchHHHHH-hcCCCCCCCEEEEcCCceEecCCHHHHHHHHhhh--hhhhcccCHHHHHHHHHHHHHHh
Confidence 46799999999999955544 443 123489999998887777532 1111 11000011122333344444332
Q ss_pred hCCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 78 TGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 78 tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
..+|..|.+.|+||.||+++
T Consensus 481 ----------------~~~p~~aa~~~~vD~VIdP~ 500 (530)
T 3iav_A 481 ----------------LLNPYTAAERGYVDAVIMPS 500 (530)
T ss_dssp ----------------HSSSHHHHHTTSSSEECCGG
T ss_pred ----------------cCCHHHHHhcCCCCcccCHH
Confidence 34788999999999999875
No 98
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=95.14 E-value=0.012 Score=47.61 Aligned_cols=85 Identities=14% Similarity=0.192 Sum_probs=55.5
Q ss_pred cCCCeEEEEehhhhhHHHHHHhc----CCCCcEEecCCceeeeecCCcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLAS----GTKGKRFSLPNSRIMIHQPLGG---AQGQASDIEIQAREILYLRQRLNEILSE 76 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~a----g~~~~R~~~p~s~~miH~p~~~---~~G~~~~l~~~~~~l~~~~~~~~~~ya~ 76 (114)
.+.|+.|+++|.+.|.|.+.+++ ++. .++.|++.+-+=.|.+. .+.+ ++.. .+ . .+...+-|.+
T Consensus 410 a~VP~itvI~g~~~Ggg~~am~~~~~~~d~--~~awp~A~i~Vm~pegaa~Il~r~--~~~~-~~---~-~~~~~~~y~~ 480 (531)
T 3n6r_B 410 ATVPMVTVITRKAYGGAYVVMSSKHLRADF--NYAWPTAEVAVMGAKGATEIIHRG--DLGD-PE---K-IAQHTADYEE 480 (531)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTTCGGGTCSE--EEECTTCEEESSCHHHHHHHHCCT--TTTS-TT---H-HHHHHHHHHH
T ss_pred CCCCEEEEEcCCccchhhhhccCccCCCCe--EEEcCCceEecCCHHHHHHHHhcc--cccc-hh---H-HHHHHHHHHH
Confidence 46899999999999999888775 554 89999998887777532 1111 1111 00 0 1122222322
Q ss_pred HhCCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 77 KTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 77 ~tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
...+|..|.+.|+||.||+++
T Consensus 481 ----------------~~~~p~~aa~~~~vD~vIdP~ 501 (531)
T 3n6r_B 481 ----------------RFANPFVASERGFVDEVIQPR 501 (531)
T ss_dssp ----------------HHSSSHHHHHHTSSSEECCGG
T ss_pred ----------------HhcCHHHHHhcCccCcccCHH
Confidence 235677899999999999975
No 99
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=95.12 E-value=0.00072 Score=54.55 Aligned_cols=89 Identities=13% Similarity=0.141 Sum_probs=57.2
Q ss_pred cCCCeEEEEehhhhhHHHHHHhc----CCCCcEEecCCceeeeecCCcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLAS----GTKGKRFSLPNSRIMIHQPLGG---AQGQASDIEIQAREILYLRQRLNEILSE 76 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~a----g~~~~R~~~p~s~~miH~p~~~---~~G~~~~l~~~~~~l~~~~~~~~~~ya~ 76 (114)
.+.|+.++++|-++|.|.+.+++ ++. .+|.|+|.+-+=.|.+. .+... ++. +++....++.+.+.|.
T Consensus 397 ~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~--v~a~p~A~i~v~gpegaa~Il~r~~--i~~-~~d~~~~~~~l~~~y~- 470 (522)
T 1x0u_A 397 ATVPKITVIVRKSYGGAHIAMSIKSLGADL--VYAWPTAEIAVTGPEGAVRILYRKE--IQQ-ASNPDDVLKQRIAEYR- 470 (522)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTCCGGGTCSE--EEECTTCEEESSCHHHHHHHHTSSS--SSS-SSSSSSSSHHHHHHHH-
T ss_pred CCCCEEEEEeCCcccHHHHHhcccccCCCE--EEEeCCCEEEecCHHHHHHHHhhhh--hhc-ccCHHHHHHHHHHHHH-
Confidence 35799999999999999988877 776 89999999988888631 11110 000 0000011112222232
Q ss_pred HhCCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 77 KTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 77 ~tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
+.+-+|+.+.+.|+||.||+++
T Consensus 471 ---------------~~~~~~~~~~~~G~iD~II~p~ 492 (522)
T 1x0u_A 471 ---------------KLFANPYWAAEKGLVDDVIEPK 492 (522)
T ss_dssp ---------------HHHSSSHHHHHTTSSSEECCGG
T ss_pred ---------------HhcCCHHHHHhcCCCcEeECHH
Confidence 2345778899999999999864
No 100
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=95.07 E-value=0.023 Score=46.23 Aligned_cols=41 Identities=20% Similarity=0.174 Sum_probs=31.5
Q ss_pred cCCCeEEEEehhhhhHHHHHHhc----CCCCcEEecCCceeeeecCC
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLAS----GTKGKRFSLPNSRIMIHQPL 46 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~a----g~~~~R~~~p~s~~miH~p~ 46 (114)
.+.|+.|+++|-+.+.|.+.+++ ++. .++.|++.+-+=.|.
T Consensus 424 a~vP~itvi~g~~~Ggg~~am~~~~~~~d~--~~a~p~A~i~Vmgpe 468 (555)
T 3u9r_B 424 ARVPKFTVLIGGSFGAGNYGMCGRAYDPRF--LWMWPNARIGVMGGE 468 (555)
T ss_dssp CCSCEEEEEEEEEETTHHHHTTCGGGCCSE--EEECTTCEEESSCHH
T ss_pred CCCCEEEEEeCCccchhhHhhcCccCCCCe--EEEcCCcEEEcCCHH
Confidence 46799999999999998887763 343 788888887765553
No 101
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=94.18 E-value=0.05 Score=44.48 Aligned_cols=97 Identities=13% Similarity=0.177 Sum_probs=52.6
Q ss_pred cCCCeEEEEehhhhhHHHHHHhc---CCC-CcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHH---HHHHHHH
Q psy5228 4 IKPNVSTLCIGLAASMGAFLLAS---GTK-GKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQR---LNEILSE 76 (114)
Q Consensus 4 ~~~~V~t~~~G~aaS~as~i~~a---g~~-~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~---~~~~ya~ 76 (114)
.+.|+.|+++|.+.|.|.+.+++ ++. ...++.|+|.+.+=.|.+.. .+ ...+++.+..+. ....-++
T Consensus 445 a~VP~itvI~g~~~Ggg~~am~~~~~~~~~~~~~awp~A~~sVm~pEgaa-----~I-l~~~~~~~~~~~~~~~~~~~~~ 518 (588)
T 3gf3_A 445 SKLPSLEITIRKASAAAHYVLGGPQGNNTNVFSIGTGACEYYVMPGETAA-----NA-MYSRKLVKAKKAGEDLQPIIGK 518 (588)
T ss_dssp HCSCEEEEESSEEETTHHHHTTCTTCTTTEEEEEECTTCEEESSCHHHHH-----HH-HHHHHHHHC-------CHHHHH
T ss_pred CCCCEEEEEcCCccHHHHHHhcccccCCccceEEECCCceEEeCCHHHHH-----HH-HhhhHHhhhhccccccchHHHH
Confidence 46899999999999977766653 120 13567788877766664321 11 011111111000 0000000
Q ss_pred HhCCCHHHHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 77 KTGHSVKKISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 77 ~tg~s~~~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
..++.+..++. .+|--|-+.|++|.||+++
T Consensus 519 -----~~~~~~~y~~~--~~p~~aA~r~~vD~VIdP~ 548 (588)
T 3gf3_A 519 -----MNDMIQMYTDK--SRPKYCTEKGMVDEIVDMT 548 (588)
T ss_dssp -----HHHHHHHHHHT--TSHHHHHHTTSSSEECCGG
T ss_pred -----HHHHHHHHHHh--CCHHHHHhcCCCCeeeCHH
Confidence 11222222222 4899999999999999875
No 102
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=90.53 E-value=0.22 Score=37.11 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=49.4
Q ss_pred CCCeEEEEehhhhhHHHHHH-hcCCCCcEEecCCceeeeecCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Q psy5228 5 KPNVSTLCIGLAASMGAFLL-ASGTKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRQRLNEILSEKTGHSVK 83 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i~-~ag~~~~R~~~p~s~~miH~p~~~~~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~~ 83 (114)
..|..+++.|-+.+.++..+ +.|+. .++.|+|.+-+--|..- ++-++..
T Consensus 194 ~vP~Isvv~g~~~GG~~as~a~~~D~--i~a~p~A~i~~aGP~vi--------------------------~~~~~~~-- 243 (285)
T 2f9i_B 194 GLLYISYLTHPTTGGVSASFASVGDI--NLSEPKALIGFAGRRVI--------------------------EQTINEK-- 243 (285)
T ss_dssp TCCEEEEEEEEEEHHHHTTGGGCCSE--EEECTTCBEESSCHHHH--------------------------HHHHTSC--
T ss_pred CCCEEEEEeCCccHHHHHHhhhCCCE--EEEeCCcEEEEcCHHHH--------------------------HHHhccc--
Confidence 57999999999987776663 45665 78889988877666331 0011111
Q ss_pred HHHhhhcCCceecHHHHHHcCcceeecccC
Q psy5228 84 KISQDTDRDNFMSAKMAMEYCLIDKILKQR 113 (114)
Q Consensus 84 ~i~~~m~~~~~lta~eA~~~GliD~Ii~~~ 113 (114)
.. +-+=+++-..+.|+||.|++++
T Consensus 244 -----~~-e~~~~Ae~~~~~G~iD~Iv~~~ 267 (285)
T 2f9i_B 244 -----LP-DDFQTAEFLLEHGQLDKVVHRN 267 (285)
T ss_dssp -----CC-TTTTBHHHHHHTTCCSEECCGG
T ss_pred -----ch-HhHhhHHHHHhcCCccEEeChH
Confidence 11 2334688889999999999854
No 103
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=81.66 E-value=1.6 Score=36.94 Aligned_cols=43 Identities=14% Similarity=0.192 Sum_probs=29.2
Q ss_pred cCCCeEEEE--ehhhhhHHHHHHhcCCCC--c--EEecCCceeeeecCCc
Q psy5228 4 IKPNVSTLC--IGLAASMGAFLLASGTKG--K--RFSLPNSRIMIHQPLG 47 (114)
Q Consensus 4 ~~~~V~t~~--~G~aaS~as~i~~ag~~~--~--R~~~p~s~~miH~p~~ 47 (114)
.+.|+.|++ .|-+.+ |++.+++..-+ . .++.|+|.+-+=.|.+
T Consensus 520 a~VP~itvI~r~Ge~~G-Ga~~~~~~~~~~d~~ev~Awp~A~~~VM~pEg 568 (793)
T 2x24_A 520 YRQPVLIYIPPYAEVRG-GSWAVMDTSINPLCIEMYADRESRASVLEPEG 568 (793)
T ss_dssp CCSCEEEEECTTCEEEH-HHHHTTCGGGSTTTEEEEEETTCEEESSCHHH
T ss_pred cCCCEEEEEecCCcccc-hhHHhhhcccCccHHHHhhhccCEEEecCHHH
Confidence 467999999 787755 66666643222 2 3788888887766654
No 104
>2i6e_A Hypothetical protein; NYSGXRC,10093B, structural genomics, PSI-2, protein structure initiative; 2.50A {Deinococcus radiodurans} SCOP: c.94.1.1
Probab=76.07 E-value=4.6 Score=29.58 Aligned_cols=55 Identities=11% Similarity=0.023 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCce-ecHH----------HHHHcCcceeecc
Q psy5228 56 IEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNF-MSAK----------MAMEYCLIDKILK 111 (114)
Q Consensus 56 l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~-lta~----------eA~~~GliD~Ii~ 111 (114)
+++..+......+.+.+.+++++|++.+.+...+.+-.| ++++ .+ +.|+|.+-++
T Consensus 223 l~~a~~~~~~~~~e~~~~~a~~~gl~~~~i~~yl~~~~~~l~~~~~~~l~~~~~~~-~~glip~~~d 288 (301)
T 2i6e_A 223 MREARRRGIGHLAEVSQRHAEKLGLPERVVQHYLWNFRYHLEAPDRLGLREFADLA-VPGHAELTFG 288 (301)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTTCCHHHHHHHHHTCBCSCCHHHHHHHHHHHHHH-STTCCCCCC-
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHhCeeCCCHHHHHHHHHHHHHH-hcCCCCCCCC
Confidence 444444555556678999999999999999998866555 3322 24 6788876554
No 105
>2nxo_A Hypothetical protein SCO4506; PFAM, DUF178, NYSGXRC, 10093F, PSI-2, structural genomics, protein structure initiative; 2.04A {Streptomyces coelicolor} SCOP: c.94.1.1
Probab=65.26 E-value=6.1 Score=28.27 Aligned_cols=47 Identities=9% Similarity=-0.032 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHhhhcCCce-ecHH----------HHHHcCcceeec
Q psy5228 64 LYLRQRLNEILSEKTGHSVKKISQDTDRDNF-MSAK----------MAMEYCLIDKIL 110 (114)
Q Consensus 64 ~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~-lta~----------eA~~~GliD~Ii 110 (114)
....+...+++++.+|++.+.+...+.+-.| ++++ .+.+.|+|++..
T Consensus 219 ~~~p~ea~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gli~~~~ 276 (291)
T 2nxo_A 219 LEEVEKVAEQAARWEAFDEDTLAKYFTTLDFRFGAPQLEAVTEFARRVGPTTGFPADV 276 (291)
T ss_dssp HHTHHHHHHHHHTTSSSCHHHHHHHHHHSBCCCSHHHHHHHHHHHHHHSTTTTSCTTC
T ss_pred HHCHHHHHHHHHHHcCCCHHHHHHHHHhCccCCCHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 3334556788999999999999988754444 4432 245578877543
No 106
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=64.40 E-value=22 Score=25.36 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHhhhc-CCce----ecH----------HHHHHcCcceeec
Q psy5228 63 ILYLRQRLNEILSEKTGHSVKKISQDTD-RDNF----MSA----------KMAMEYCLIDKIL 110 (114)
Q Consensus 63 l~~~~~~~~~~ya~~tg~s~~~i~~~m~-~~~~----lta----------~eA~~~GliD~Ii 110 (114)
+....+...+++++.+|.+.+.+.+.++ +..| +++ +...+.|+|++-+
T Consensus 242 ~~~~p~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gli~~~~ 304 (324)
T 3ksx_A 242 LERDRAGSIKTLAQVSGLPPAVVERTLAHRPPASVQPLSAQVIKAQQATADLFYAQRLLPKRV 304 (324)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCCBCCCHHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred HHHCHHHHHHHHHHHHCcCHHHHHHHHhhcCcCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 3334456778889999999999999887 4333 333 3456789887644
No 107
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=55.62 E-value=21 Score=19.88 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=23.8
Q ss_pred HHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 70 LNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 70 ~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
-..-+|+++|.+...|.++.......+.+...
T Consensus 17 sq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~ 48 (77)
T 2k9q_A 17 TAKSVAEEMGISRQQLCNIEQSETAPVVVKYI 48 (77)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTCCSCCHHHHHH
T ss_pred CHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHH
Confidence 35668899999999999888776666665543
No 108
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=53.49 E-value=25 Score=19.04 Aligned_cols=31 Identities=13% Similarity=0.029 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..-+|+.+|.+...|.++.......+.+...
T Consensus 29 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 59 (74)
T 1y7y_A 29 QETLAFLSGLDRSYVGGVERGQRNVSLVNIL 59 (74)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCSCCBHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHCCCCCCCHHHHH
Confidence 5668899999999999988777777776543
No 109
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=53.08 E-value=25 Score=19.30 Aligned_cols=46 Identities=4% Similarity=-0.015 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCc-eecHHHHH
Q psy5228 56 IEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDN-FMSAKMAM 101 (114)
Q Consensus 56 l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~-~lta~eA~ 101 (114)
+....+.+...+..-..-+|+.+|.|...|.++..... ..+.+...
T Consensus 8 ~~~~l~~~r~~~g~sq~~lA~~~gis~~~i~~~e~g~~~~~~~~~l~ 54 (78)
T 3b7h_A 8 VSEHLMELITQQNLTINRVATLAGLNQSTVNAMFEGRSKRPTITTIR 54 (78)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHCTTCCCCCHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHH
Confidence 33334444333333356789999999999999887776 66766543
No 110
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=52.33 E-value=27 Score=19.02 Aligned_cols=32 Identities=19% Similarity=0.069 Sum_probs=24.5
Q ss_pred HHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 70 LNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 70 ~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
-..-+|+.+|.|...|.++.......+.+...
T Consensus 20 s~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 51 (76)
T 1adr_A 20 RQAALGKMVGVSNVAISQWERSETEPNGENLL 51 (76)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 35668899999999999988776666666543
No 111
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=52.17 E-value=30 Score=19.45 Aligned_cols=31 Identities=19% Similarity=0.139 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..-+|+.+|.|...|.++.....-.+.+...
T Consensus 28 q~~lA~~~gvs~~~is~~e~g~~~~~~~~~~ 58 (80)
T 3kz3_A 28 YESVADKMGMGQSAVAALFNGINALNAYNAA 58 (80)
T ss_dssp HHHHHHHTTSCHHHHHHHHTTSSCCCHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHcCCCCCCHHHHH
Confidence 5568899999999999988777666766543
No 112
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=50.98 E-value=31 Score=19.33 Aligned_cols=32 Identities=13% Similarity=0.176 Sum_probs=24.4
Q ss_pred HHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 70 LNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 70 ~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
-..-+|+++|.+...|.++.......+.+...
T Consensus 29 tq~elA~~~gis~~~is~~e~g~~~~~~~~l~ 60 (83)
T 3f6w_A 29 TQKELAARLGRPQSFVSKTENAERRLDVIEFM 60 (83)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHH
Confidence 35678899999999998888777666766544
No 113
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=50.97 E-value=26 Score=18.53 Aligned_cols=31 Identities=19% Similarity=0.095 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..-+|+.+|.|...|.++.......+.+...
T Consensus 21 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 51 (68)
T 2r1j_L 21 QAALGKMVGVSNVAISQWERSETEPNGENLL 51 (68)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCBHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCCCCHHHHH
Confidence 5668999999999999988776666666543
No 114
>2wiu_B HTH-type transcriptional regulator HIPB; transferase transcription complex, serine kinase, DNA-bindin mercury derivative, repressor; 2.35A {Escherichia coli} PDB: 3dnv_B* 3dnw_B* 3hzi_B*
Probab=50.59 E-value=24 Score=19.99 Aligned_cols=48 Identities=10% Similarity=0.050 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 54 SDIEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 54 ~~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
.++....+.+...+..-..-+|+.+|.+...|.++.......+.+...
T Consensus 11 ~~~~~~l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 58 (88)
T 2wiu_B 11 TQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFF 58 (88)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHCGGGCBHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHH
Confidence 344444444444333335678999999999999988776666666543
No 115
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=46.46 E-value=6.3 Score=33.20 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=30.6
Q ss_pred cCCCeEEEEe--hhhhhHHHHHHhcCC--CCc--EEecCCceeeeecCCc
Q psy5228 4 IKPNVSTLCI--GLAASMGAFLLASGT--KGK--RFSLPNSRIMIHQPLG 47 (114)
Q Consensus 4 ~~~~V~t~~~--G~aaS~as~i~~ag~--~~~--R~~~p~s~~miH~p~~ 47 (114)
.+.|+.|++. |.+.+ |+++.++++ .+. .++.|+|.+-+=.|.+
T Consensus 506 a~VP~itVI~RkGe~~G-GA~~am~~~~~ad~~~v~Awp~A~isVM~pEg 554 (758)
T 3k8x_A 506 YKQPIIIYIPPTGELRG-GSWVVVDPTINADQMEMYADVNARAGVLEPQG 554 (758)
T ss_dssp CCSCEEEEECTTCEEET-HHHHTTCGGGSTTTEEEEEETTCEEESSCHHH
T ss_pred CCCCEEEEEecCCccch-HHHHHhCcccCCCHHHHhcCCCCEEEccCHHH
Confidence 4679999999 88877 455555531 223 7888999888777764
No 116
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=45.64 E-value=36 Score=18.56 Aligned_cols=31 Identities=23% Similarity=0.120 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..-+|+.+|.|...|.++.......+.+...
T Consensus 26 q~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 56 (77)
T 2b5a_A 26 QEELADLAGLHRTYISEVERGDRNISLINIH 56 (77)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCSCCBHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
Confidence 5668889999999999888776666666543
No 117
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=44.82 E-value=40 Score=18.82 Aligned_cols=32 Identities=19% Similarity=0.028 Sum_probs=24.4
Q ss_pred HHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 70 LNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 70 ~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
-..-+|+++|.+...|.++.......+.+...
T Consensus 26 sq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 57 (82)
T 3s8q_A 26 TQEDLAYKSNLDRTYISGIERNSRNLTIKSLE 57 (82)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTCCCCBHHHHH
T ss_pred CHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHH
Confidence 35678999999999999888776666666543
No 118
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=44.34 E-value=12 Score=31.78 Aligned_cols=40 Identities=20% Similarity=0.315 Sum_probs=35.6
Q ss_pred CCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCC
Q psy5228 5 KPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPL 46 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~ 46 (114)
..|..+++.|-+.+.++++...|+. .++.+++.+.+--|.
T Consensus 259 ~iP~IsvV~G~~~GGgAy~~~lgD~--vI~~~~a~i~ltGp~ 298 (793)
T 2x24_A 259 EIVTISMVSCRALGIGAYLVRLGQR--VIQVENSHIILTGAT 298 (793)
T ss_dssp HSCEEEEECSEEETHHHHHHHHTCC--EEEETTCEEESSCHH
T ss_pred CCCEEEEEecCCchHHHHHHhhCCe--EEEeccccEEecCHH
Confidence 4799999999999999999999998 899999888777665
No 119
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=43.79 E-value=44 Score=19.97 Aligned_cols=43 Identities=19% Similarity=0.026 Sum_probs=29.3
Q ss_pred HHHHHHHHHHH---HHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 59 QAREILYLRQR---LNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 59 ~~~~l~~~~~~---~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..+.|..+++. -.+-+|+++|.+...|.++.......+.+...
T Consensus 29 ig~~lr~~R~~~gltq~elA~~~gis~~~is~iE~G~~~ps~~~l~ 74 (99)
T 3g5g_A 29 VSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLE 74 (99)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHH
Confidence 33444444333 35678999999999999988777667766543
No 120
>2ict_A Antitoxin HIGA; helix-turn-helix, structural genomics, PSI-2, protein struct initiative, northeast structural genomics consortium, NESG; 1.63A {Escherichia coli} SCOP: a.35.1.3 PDB: 2icp_A
Probab=43.15 E-value=38 Score=19.57 Aligned_cols=31 Identities=10% Similarity=0.037 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..-+|+++|.|...|.++.......+.+.+.
T Consensus 24 q~~lA~~~gis~~~is~~e~g~~~~~~~~~~ 54 (94)
T 2ict_A 24 LREFARAMEIAPSTASRLLTGKAALTPEMAI 54 (94)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSSCCCHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCCCCHHHHH
Confidence 4668888888888888887766666666543
No 121
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=42.07 E-value=59 Score=21.71 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=21.6
Q ss_pred HHHHHHHH-hCCCHHHHHhhhcCCceecHHHH
Q psy5228 70 LNEILSEK-TGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 70 ~~~~ya~~-tg~s~~~i~~~m~~~~~lta~eA 100 (114)
..+..|.. .|+|+++|++...=..-|||+|=
T Consensus 125 ~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe 156 (169)
T 3v7d_A 125 GCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEE 156 (169)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHH
Confidence 33334433 48999999999865555899864
No 122
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=41.90 E-value=16 Score=20.57 Aligned_cols=16 Identities=13% Similarity=0.050 Sum_probs=14.0
Q ss_pred HHHhCCCHHHHHhhhc
Q psy5228 75 SEKTGHSVKKISQDTD 90 (114)
Q Consensus 75 a~~tg~s~~~i~~~m~ 90 (114)
|+++|.|.++|.+++.
T Consensus 22 Ak~lGlsleEIrefL~ 37 (57)
T 1b0n_B 22 AKEANISPEEIRKYLL 37 (57)
T ss_dssp HHHTTCCHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHH
Confidence 6789999999999874
No 123
>2x26_A Periplasmic aliphatic sulphonates-binding protein; transport protein; 1.75A {Escherichia coli}
Probab=40.82 E-value=78 Score=21.96 Aligned_cols=43 Identities=19% Similarity=0.218 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCHHHHHhhhcCCc-e----ecH----------HHHHHcCcceeec
Q psy5228 68 QRLNEILSEKTGHSVKKISQDTDRDN-F----MSA----------KMAMEYCLIDKIL 110 (114)
Q Consensus 68 ~~~~~~ya~~tg~s~~~i~~~m~~~~-~----lta----------~eA~~~GliD~Ii 110 (114)
+...+++++.+|.+.+.+...+.+.. | ++. +...+.|+|++-+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 278 (308)
T 2x26_A 221 EQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKV 278 (308)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHTCCCCCCBCCCHHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred HHHHHHHHHHhCcCHHHHHHHHhccCccCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 45678888999999999988776543 3 232 2346888887643
No 124
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=40.70 E-value=42 Score=17.96 Aligned_cols=31 Identities=10% Similarity=0.019 Sum_probs=23.5
Q ss_pred HHHHHHHhC--CCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTG--HSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg--~s~~~i~~~m~~~~~lta~eA~ 101 (114)
.+-+|+.+| .+...+.++.......+.+...
T Consensus 24 q~~lA~~~g~~is~~~i~~~e~g~~~~~~~~l~ 56 (71)
T 2ewt_A 24 LHGVEEKSQGRWKAVVVGSYERGDRAVTVQRLA 56 (71)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHTCSCCCHHHHH
T ss_pred HHHHHHHHCCcCCHHHHHHHHCCCCCCCHHHHH
Confidence 566888999 8999998888766666666543
No 125
>1lmb_3 Protein (lambda repressor); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.80A {Enterobacteria phage lambda} SCOP: a.35.1.2 PDB: 1lrp_A 1rio_A 1lli_A*
Probab=40.62 E-value=50 Score=18.78 Aligned_cols=30 Identities=20% Similarity=0.159 Sum_probs=22.5
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
..-+|+.+|.+...|.++.....-.+.+..
T Consensus 33 q~~lA~~~gis~~~is~~e~g~~~~~~~~l 62 (92)
T 1lmb_3 33 QESVADKMGMGQSGVGALFNGINALNAYNA 62 (92)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHH
Confidence 466888899998888888876666666544
No 126
>3mn2_A Probable ARAC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=39.08 E-value=58 Score=19.33 Aligned_cols=52 Identities=10% Similarity=0.009 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHh---------hhcCCce-ecHHH-HHHcCcce
Q psy5228 56 IEIQAREILYLRQRLNEILSEKTGHSVKKISQ---------DTDRDNF-MSAKM-AMEYCLID 107 (114)
Q Consensus 56 l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~---------~m~~~~~-lta~e-A~~~GliD 107 (114)
+...++.+.--...+...+.+.+|.|+.++.. ++....+ ++-.| |.+.||-|
T Consensus 21 ~~~lA~~~~~s~~~l~r~fk~~~G~s~~~~~~~~Rl~~A~~lL~~~~~~~si~~IA~~~Gf~~ 83 (108)
T 3mn2_A 21 IEKLTALTGISSRGIFKAFQRSRGYSPMAFAKRVRLQHAHNLLSDGATPTTVTAAALSCGFSN 83 (108)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHSSSSCCCHHHHHHHTTCCC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCCCC
Confidence 44456666656778888899999998766554 3333333 55544 67778765
No 127
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=37.17 E-value=49 Score=17.97 Aligned_cols=31 Identities=19% Similarity=0.089 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..-+|+++|.+...|.++.....-.+.+...
T Consensus 24 q~~lA~~~gis~~~is~~e~g~~~~~~~~l~ 54 (73)
T 3omt_A 24 NLWLTETLDKNKTTVSKWCTNDVQPSLETLF 54 (73)
T ss_dssp HHHHHHHTTCCHHHHHHHHTTSSCCCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 4568899999999999998777667776554
No 128
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=36.73 E-value=36 Score=28.00 Aligned_cols=51 Identities=10% Similarity=0.113 Sum_probs=38.6
Q ss_pred HHHHHHHHHH---HHHHHHHHhCCCHHHHHhhh---cCCceecHHHHHHcCcceeec
Q psy5228 60 AREILYLRQR---LNEILSEKTGHSVKKISQDT---DRDNFMSAKMAMEYCLIDKIL 110 (114)
Q Consensus 60 ~~~l~~~~~~---~~~~ya~~tg~s~~~i~~~m---~~~~~lta~eA~~~GliD~Ii 110 (114)
.++++..+.. -.+.+.++.|++.++|++.. .-..|++++.|+..||+-.+.
T Consensus 507 Ir~~qlAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~~ 563 (631)
T 3zyy_X 507 IQNLIRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDID 563 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCcc
Confidence 3444444433 36678889999999999875 457999999999999987654
No 129
>3vk0_A NHTF, transcriptional regulator; HTH motif, XRE transcription factor, DNA binding protein; 1.88A {Neisseria meningitidis}
Probab=35.91 E-value=59 Score=19.63 Aligned_cols=46 Identities=11% Similarity=0.010 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 56 IEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 56 l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
+....+++...+..-.+-+|+++|.+...|.++.....-.+.+...
T Consensus 22 ~g~~lr~~R~~~gltq~elA~~~gis~~~is~~E~G~~~p~~~~l~ 67 (114)
T 3vk0_A 22 LAYNMRLFRVNKGWSQEELARQCGLDRTYVSAVERKRWNIALSNIE 67 (114)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHTTTCCCCCHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 4444444444433345678999999999999988776666665543
No 130
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=35.37 E-value=42 Score=17.54 Aligned_cols=31 Identities=16% Similarity=0.043 Sum_probs=23.2
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..-+|+.+|.|...|.++.......+.+...
T Consensus 17 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 47 (66)
T 2xi8_A 17 QSELAALLEVSRQTINGIEKNKYNPSLQLAL 47 (66)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSCCCCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 4568888999999999888776666666543
No 131
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=35.04 E-value=37 Score=20.01 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhc
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTD 90 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~ 90 (114)
+..+++.+++++++|..++...++
T Consensus 3 k~eli~~ia~~~~ls~~~~~~~l~ 26 (90)
T 1b8z_A 3 KKELIDRVAKKAGAKKKDVKLILD 26 (90)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHH
Confidence 345788889999999888887663
No 132
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=34.16 E-value=58 Score=18.40 Aligned_cols=46 Identities=15% Similarity=0.019 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCc-eecHHHH
Q psy5228 55 DIEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDN-FMSAKMA 100 (114)
Q Consensus 55 ~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~-~lta~eA 100 (114)
.+....+.+...+..-..-+|+++|.+...|.++..... -.+.+..
T Consensus 18 ~~~~~l~~~r~~~glsq~elA~~~gis~~~is~~e~g~~~~~~~~~l 64 (83)
T 2a6c_A 18 QLLIVLQEHLRNSGLTQFKAAELLGVTQPRVSDLMRGKIDLFSLESL 64 (83)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHTSCHHHHHHHHTTCGGGCCHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHH
Confidence 333344444333333356789999999999999887776 4666654
No 133
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=34.10 E-value=62 Score=21.15 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHH-hCCCHHHHHhhhcCCceecHHH
Q psy5228 53 ASDIEIQAREIL--YLRQRLNEILSEK-TGHSVKKISQDTDRDNFMSAKM 99 (114)
Q Consensus 53 ~~~l~~~~~~l~--~~~~~~~~~ya~~-tg~s~~~i~~~m~~~~~lta~e 99 (114)
.-+|-..+..|+ .+.+...+.++.. .|+|+++|++...=..-|||+|
T Consensus 99 l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eE 148 (159)
T 2ast_A 99 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEE 148 (159)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHH
Confidence 445555566553 4444444555544 5799999999986555688875
No 134
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=33.89 E-value=57 Score=21.48 Aligned_cols=31 Identities=13% Similarity=-0.002 Sum_probs=22.6
Q ss_pred HHHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 70 LNEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 70 ~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
-.+-+|+++|.|...|.++.......+.+..
T Consensus 26 tq~~lA~~~gis~~~is~~e~g~~~p~~~~l 56 (192)
T 1y9q_A 26 SLDATAQLTGVSKAMLGQIERGESSPTIATL 56 (192)
T ss_dssp CHHHHHHHHSSCHHHHHHHHTTCSCCCHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCHHHH
Confidence 3567888999998888888766655555543
No 135
>3cec_A Putative antidote protein of plasmid maintenance; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.60A {Nostoc punctiforme}
Probab=33.78 E-value=72 Score=18.72 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=24.4
Q ss_pred HHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 70 LNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 70 ~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
-..-+|+.+|.|...|.++.......+.+.+.
T Consensus 33 tq~~lA~~~gis~~~is~~e~g~~~~~~~~l~ 64 (104)
T 3cec_A 33 NTANFAEILGVSNQTIQEVINGQRSITVDIAI 64 (104)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCcCCCHHHHH
Confidence 35668889999999999888777667766543
No 136
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=33.65 E-value=42 Score=19.84 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhCCCHHHHHhhhc
Q psy5228 68 QRLNEILSEKTGHSVKKISQDTD 90 (114)
Q Consensus 68 ~~~~~~ya~~tg~s~~~i~~~m~ 90 (114)
..+++.+++++++|..++...++
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~ 26 (90)
T 1mul_A 4 TQLIDVIAEKAELSKTQAKAALE 26 (90)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHH
Confidence 45788889999999988887663
No 137
>2kpj_A SOS-response transcriptional repressor, LEXA; NESG, GFT, structural genomics, PSI-2, protein structure initiative; NMR {Eubacterium rectale atcc 33656}
Probab=33.50 E-value=37 Score=19.71 Aligned_cols=30 Identities=7% Similarity=-0.072 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
..-+|+++|.+...|.++.......+.+..
T Consensus 25 q~~lA~~~gis~~~is~~e~G~~~p~~~~l 54 (94)
T 2kpj_A 25 QLEIAKSIGVSPQTFNTWCKGIAIPRMGKV 54 (94)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSCCCCHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHhCCCCCCHHHH
Confidence 466888999999999888876666666544
No 138
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=32.38 E-value=43 Score=19.96 Aligned_cols=24 Identities=17% Similarity=0.200 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhc
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTD 90 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~ 90 (114)
+..+++.+++++++|..++...++
T Consensus 3 k~eli~~ia~~~~ls~~~~~~~l~ 26 (94)
T 1p71_A 3 KGELVDAVAEKASVTKKQADAVLT 26 (94)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHH
Confidence 345788889999999988887663
No 139
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=31.99 E-value=37 Score=22.94 Aligned_cols=34 Identities=12% Similarity=-0.001 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCCHHHHHhhhcCCceecHHHHHHc
Q psy5228 70 LNEILSEKTGHSVKKISQDTDRDNFMSAKMAMEY 103 (114)
Q Consensus 70 ~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~~~ 103 (114)
-.+-+|+.+|+|+.-+....-....+++++|...
T Consensus 28 Twe~IAe~iG~S~v~vtaa~lGQ~~ls~e~A~kL 61 (156)
T 1dw9_A 28 SFAEIADGTGLAEAFVTAALLGQQALPADAARLV 61 (156)
T ss_dssp CHHHHHTTSSSCHHHHHHHHTTSSCCCHHHHHHH
T ss_pred CHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHH
Confidence 3566788889888888888888888999988653
No 140
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=31.86 E-value=20 Score=28.72 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=34.6
Q ss_pred CCCeEEEEehhhhhHHHHHHhcCCCCcEEecCC-ceeeeecCC
Q psy5228 5 KPNVSTLCIGLAASMGAFLLASGTKGKRFSLPN-SRIMIHQPL 46 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~-s~~miH~p~ 46 (114)
..|+.+++.|-|.+.++..+..|+. .+|.|+ +.+-+--|.
T Consensus 170 ~iP~Isvv~Gp~~GG~a~s~al~D~--vi~~~~~a~i~~aGP~ 210 (527)
T 1vrg_A 170 VVPQITVIAGPCAGGAVYSPALTDF--IVMVDQTARMFITGPN 210 (527)
T ss_dssp TSCEEEEEEEEEBGGGGHHHHHSSE--EEEETTTCBCBSSCHH
T ss_pred CCCEEEEEeCCCchHHHHHHHcCCe--EEEecCceEEEecCHH
Confidence 3689999999999999999999998 899998 887776665
No 141
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=31.08 E-value=53 Score=17.75 Aligned_cols=31 Identities=29% Similarity=0.279 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
..-+|+.+|.+...|.++.......+.+...
T Consensus 26 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 56 (76)
T 3bs3_A 26 NRWLAEQMGKSENTISRWCSNKSQPSLDMLV 56 (76)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSSCCCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 4568888999999999888776666666543
No 142
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=30.48 E-value=43 Score=19.83 Aligned_cols=24 Identities=13% Similarity=0.160 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhc
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTD 90 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~ 90 (114)
+..+++.+++++|+|..++...++
T Consensus 3 k~eli~~ia~~~~ls~~~~~~~l~ 26 (90)
T 2o97_B 3 KSQLIDKIAAGADISKAAAGRALD 26 (90)
T ss_dssp HHHHHHHHHHTTC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHH
Confidence 345778889999999888887663
No 143
>1x57_A Endothelial differentiation-related factor 1; HMBF1alpha, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.12
Probab=30.16 E-value=54 Score=18.74 Aligned_cols=45 Identities=7% Similarity=-0.023 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 56 IEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 56 l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
+....+.+......-..-+|+.+|.+...|.++.......+.+..
T Consensus 14 ~~~~l~~~r~~~glsq~~lA~~~gis~~~is~~e~g~~~p~~~~l 58 (91)
T 1x57_A 14 VGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVL 58 (91)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHTSCHHHHHHHHHTCSCCCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHH
Confidence 333344443333333566888999999999888766655666544
No 144
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=29.66 E-value=51 Score=19.92 Aligned_cols=24 Identities=17% Similarity=0.432 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhc
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTD 90 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~ 90 (114)
+..+++.++++++++..++...++
T Consensus 3 k~eLi~~ia~~~~lsk~~~~~~l~ 26 (99)
T 3c4i_A 3 KAELIDVLTQKLGSDRRQATAAVE 26 (99)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHH
Confidence 345788889999999888887763
No 145
>1lm5_A Subdomain of desmoplakin carboxy-terminal domain (DPCT); plakin repeat,, structural protein; 1.80A {Homo sapiens} SCOP: d.211.2.1
Probab=29.42 E-value=19 Score=25.38 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=15.7
Q ss_pred CCceecHHHHHHcCccee
Q psy5228 91 RDNFMSAKMAMEYCLIDK 108 (114)
Q Consensus 91 ~~~~lta~eA~~~GliD~ 108 (114)
...-||-+||++.|+||+
T Consensus 57 tg~~lsv~eA~~~GlId~ 74 (214)
T 1lm5_A 57 TGQKLSLQDAVSQGVIDQ 74 (214)
T ss_dssp TCCEECHHHHHHTTSSCH
T ss_pred CCCcCCHHHHHHcCCCCH
Confidence 456799999999999996
No 146
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=28.81 E-value=36 Score=22.51 Aligned_cols=45 Identities=11% Similarity=0.148 Sum_probs=27.0
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHH-hCCCHHHHHhhhcCCceecHHH
Q psy5228 55 DIEIQAREIL--YLRQRLNEILSEK-TGHSVKKISQDTDRDNFMSAKM 99 (114)
Q Consensus 55 ~l~~~~~~l~--~~~~~~~~~ya~~-tg~s~~~i~~~m~~~~~lta~e 99 (114)
+|-..|..|+ .+-+...+..|.. .|+|+++|++...=..-|||+|
T Consensus 100 eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eE 147 (160)
T 2p1m_A 100 ELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEE 147 (160)
T ss_dssp -CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHH
Confidence 3334444442 3333444445544 4799999999976555589886
No 147
>1owf_A IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ihf_A 1ouz_A 1owg_A 2ht0_A
Probab=28.66 E-value=55 Score=19.73 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhc
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTD 90 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~ 90 (114)
...+++.+++++++|..++...++
T Consensus 5 k~eli~~ia~~~~ls~~~~~~vl~ 28 (99)
T 1owf_A 5 KAEMSEYLFDKLGLSKRDAKELVE 28 (99)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHH
Confidence 356788889999999988887764
No 148
>3f52_A CLP gene regulator (CLGR); helix-turn-helix motif, transcriptional ACTI human pathogen, transcription activator; 1.75A {Corynebacterium glutamicum} PDB: 3f51_A
Probab=27.78 E-value=1e+02 Score=18.41 Aligned_cols=46 Identities=13% Similarity=0.000 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 55 DIEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 55 ~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
.+....+.+...+..-..-+|+++|.|...|.++.......+.+..
T Consensus 28 ~~g~~l~~~R~~~glsq~~lA~~~gis~~~is~~E~g~~~~~~~~l 73 (117)
T 3f52_A 28 ALGAALRSFRADKGVTLRELAEASRVSPGYLSELERGRKEVSSELL 73 (117)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHTTSSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHH
Confidence 3444444444444334567899999999999888876665665544
No 149
>2ef8_A C.ECOT38IS, putative transcription factor; helix-turn-helix, DNA binding protein, transcription regulator; HET: CME; 1.95A {Enterobacteria phage P2}
Probab=27.54 E-value=82 Score=17.29 Aligned_cols=28 Identities=21% Similarity=0.080 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAK 98 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~ 98 (114)
..-+|+.+|.+...|.++.....-.+.+
T Consensus 26 q~~lA~~~gis~~~i~~~e~g~~~~~~~ 53 (84)
T 2ef8_A 26 QSELAIFLGLSQSDISKIESFERRLDAL 53 (84)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSSCCBHH
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCCCCHH
Confidence 5668999999999999888776666643
No 150
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=27.07 E-value=38 Score=20.24 Aligned_cols=24 Identities=13% Similarity=0.113 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhc
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTD 90 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~ 90 (114)
+..+++.+++++|++..++...++
T Consensus 6 k~eLi~~ia~~~~lsk~~~~~~v~ 29 (93)
T 3rhi_A 6 KTELIKNVAQNAEISQKEATVVVQ 29 (93)
T ss_dssp -CHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHH
Confidence 345788899999999888887664
No 151
>3eus_A DNA-binding protein; structural genomics, PSI2,MCSG, protein structure initiative, midwest center for structural genomic binding; 1.80A {Silicibacter pomeroyi}
Probab=25.65 E-value=98 Score=17.53 Aligned_cols=45 Identities=9% Similarity=0.003 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 56 IEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 56 l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
+....+++......-..-+++++|.|...|.++-......+.+..
T Consensus 15 ~g~~l~~~R~~~gltq~elA~~~gis~~~is~~E~G~~~p~~~~l 59 (86)
T 3eus_A 15 LCQRLRQARLDAGLTQADLAERLDKPQSFVAKVETRERRLDVIEF 59 (86)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHTTCCHHHHHHHHTTSSCCBHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHCCCCCCCHHHH
Confidence 333344443333333567899999999999998877766676644
No 152
>3op9_A PLI0006 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, transcription regulat; HET: MSE; 1.90A {Listeria innocua}
Probab=25.44 E-value=1e+02 Score=18.29 Aligned_cols=41 Identities=5% Similarity=-0.060 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 60 AREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 60 ~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
.+.+...+..-..-+|+.+|.|...|.++.......+.+..
T Consensus 14 l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~p~~~~l 54 (114)
T 3op9_A 14 LSRLKKEHGLKNHQIAELLNVQTRTVAYYMSGETKPDIEKL 54 (114)
T ss_dssp HHHHHHHHTCCHHHHHHHHTSCHHHHHHHHHTSSCCCHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHH
Confidence 33333333333556788888888888887766555665543
No 153
>2ki8_A Tungsten formylmethanofuran dehydrogenase, subunit D (FWDD-2); beta-barrel, structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus}
Probab=24.59 E-value=28 Score=22.75 Aligned_cols=17 Identities=6% Similarity=-0.156 Sum_probs=15.0
Q ss_pred CCceecHHHHHHcCcce
Q psy5228 91 RDNFMSAKMAMEYCLID 107 (114)
Q Consensus 91 ~~~~lta~eA~~~GliD 107 (114)
.-.|++|+.|.++||-|
T Consensus 53 ~~v~inp~dA~~lGI~d 69 (146)
T 2ki8_A 53 NYAEINEEDWNALGLQE 69 (146)
T ss_dssp SEEEECHHHHHHHTCCT
T ss_pred CEEEECHHHHHHcCCCC
Confidence 45889999999999987
No 154
>2x7q_A Ca3427, possible thiamine biosynthesis enzyme; unknown function; 2.00A {Candida albicans} PDB: 2x7p_A
Probab=24.54 E-value=1.6e+02 Score=20.76 Aligned_cols=29 Identities=17% Similarity=0.074 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhcCCcee
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTDRDNFM 95 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~~~~~l 95 (114)
.+...+++++.++.+.+.+.+.+....|.
T Consensus 237 p~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2x7q_A 237 VDEAIEYISSNLDYSAEDAKEWTKTVEFN 265 (321)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHTTCCBC
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHhcCccc
Confidence 44557788889999999999888765553
No 155
>2zp2_A Kinase A inhibitor; KIPI, histidine kinase inhibitor, ATP-binding, nucleotide- binding, protein kinase inhibitor, sporulation; 3.01A {Bacillus subtilis}
Probab=23.79 E-value=81 Score=20.82 Aligned_cols=24 Identities=8% Similarity=0.133 Sum_probs=18.8
Q ss_pred HHHHHHhCCCHHHHHhhhcCCcee
Q psy5228 72 EILSEKTGHSVKKISQDTDRDNFM 95 (114)
Q Consensus 72 ~~ya~~tg~s~~~i~~~m~~~~~l 95 (114)
+..|+.+|+|.+++.+......|+
T Consensus 18 ~~vA~~~gls~~evi~~h~~~~y~ 41 (141)
T 2zp2_A 18 EEVAKINQLSPEEVIDIHTNGEYV 41 (141)
T ss_dssp HHHHHHTTCCHHHHHHHHTTCCEE
T ss_pred HHHHHHhCcCHHHHHHHHhCCCeE
Confidence 456889999999999987766553
No 156
>3sj5_A Methyl-accepting chemotaxis protein; no or O2-sensing protein, signaling protein; HET: HEM; 1.67A {Caldanaerobacter subterraneus} SCOP: d.278.1.1 PDB: 3nvr_A* 3tf0_A* 1u4h_A* 1u56_A* 3m0b_A* 1u55_A* 3tf1_A* 1xbn_A* 3nvu_A* 3eee_A* 3iqb_A* 3lah_A* 3lai_A*
Probab=23.72 E-value=93 Score=21.06 Aligned_cols=26 Identities=35% Similarity=0.503 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhcCC
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTDRD 92 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~~~ 92 (114)
--.++...++.||+|.+++.+...+.
T Consensus 48 ~~~lv~a~s~~~g~~~~~ll~~fG~~ 73 (188)
T 3sj5_A 48 VRRIFAKVSEKTGKNVNEIWREVGRQ 73 (188)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 44678889999999999999877554
No 157
>1ybz_A Chorismate mutase; conserved hypothetical protein, hyperthermophIle, structural genomics, PSI, protein structu initiative; 1.82A {Pyrococcus furiosus} SCOP: a.130.1.1
Probab=23.72 E-value=1.1e+02 Score=18.35 Aligned_cols=37 Identities=11% Similarity=0.162 Sum_probs=27.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Q psy5228 50 QGQASDIEIQAREILYLRQRLNEILSEKTGHSVKKIS 86 (114)
Q Consensus 50 ~G~~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~ 86 (114)
....++|...-++++.++..+.+++++|.....+.-.
T Consensus 13 ~~~~~~L~~lR~~ID~ID~~Ll~LL~~R~~~~~~Ig~ 49 (91)
T 1ybz_A 13 QAGSTTLKLLRKEIDKIDNQIISLLKKRLEIAQAIGK 49 (91)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344568888888899999999999999876554433
No 158
>1k8v_A Neuropeptide F; moniezia expansa, NPF, unknown function; NMR {Synthetic} SCOP: j.6.1.1
Probab=23.50 E-value=53 Score=17.12 Aligned_cols=25 Identities=12% Similarity=-0.029 Sum_probs=17.7
Q ss_pred ecCCccCCCCHHHHHHHHHHHHHHH
Q psy5228 43 HQPLGGAQGQASDIEIQAREILYLR 67 (114)
Q Consensus 43 H~p~~~~~G~~~~l~~~~~~l~~~~ 67 (114)
-+|.-....++++++.+.++|++.-
T Consensus 7 ~pp~p~~F~s~~~l~~YL~~LneYy 31 (40)
T 1k8v_A 7 VNPSDLVLDNKAALRDYLRQINEYF 31 (40)
T ss_dssp SCSTTCSCSSCSHHHHHHHHHHHHH
T ss_pred CCCChhhcCCHHHHHHHHHHHHHHH
Confidence 3455456777889988888887654
No 159
>3v2l_A AGAP005208-PA; odorant binding olfaction, general odorant binding protein, transport, secreted, odorant-binding protein; HET: PG4; 1.80A {Anopheles gambiae} PDB: 4f7f_A* 3vb1_A
Probab=23.32 E-value=1.3e+02 Score=18.00 Aligned_cols=32 Identities=6% Similarity=0.074 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCC
Q psy5228 61 REILYLRQRLNEILSEKTGHSVKKISQDTDRD 92 (114)
Q Consensus 61 ~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~ 92 (114)
+++.+..+.+.+.=.+.+|.|.+.|.++...+
T Consensus 4 eq~~~~~~~~~~~C~~e~gv~~e~i~~~~~~~ 35 (120)
T 3v2l_A 4 EQMMKSGEMIRSVCLGKTKVAEELVNGLRESK 35 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHhhhhhCcCHHHHHHHHcCC
Confidence 45566666667777888999999999887544
No 160
>2czl_A Hypothetical protein TTHA1568; conserved hypothetical protein, extremely thermoph bacteria, structural genomics, NPPSFA; HET: CME TLA XPE; 1.55A {Thermus thermophilus} SCOP: c.94.1.1 PDB: 2dbp_A* 3a3u_A*
Probab=23.20 E-value=70 Score=21.89 Aligned_cols=44 Identities=9% Similarity=0.021 Sum_probs=28.2
Q ss_pred HHHHHHHHHH-hCCCHHHHHhhhcC--C--ce-ecH----------HHHHHcCcceeecc
Q psy5228 68 QRLNEILSEK-TGHSVKKISQDTDR--D--NF-MSA----------KMAMEYCLIDKILK 111 (114)
Q Consensus 68 ~~~~~~ya~~-tg~s~~~i~~~m~~--~--~~-lta----------~eA~~~GliD~Ii~ 111 (114)
+...++++++ .+.+.+.+.+.+.+ . .| +++ +.+.+.|+|++-.+
T Consensus 209 ~e~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~g~i~~~~~ 268 (272)
T 2czl_A 209 EEALDYMRAHAQELSDEVIWAHVHTYVNAFSLDVGEEGERAVARLFAEAEARGLAAPSPR 268 (272)
T ss_dssp GGGHHHHHHHCTTSCHHHHHHHHHHHCSHHHHCCHHHHHHHHHHHHHHHHHTTSSCCCSS
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 3456788888 59999999885543 1 11 332 22457899887554
No 161
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=23.08 E-value=1.2e+02 Score=19.78 Aligned_cols=45 Identities=4% Similarity=-0.025 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCc-eecHHHH
Q psy5228 56 IEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDN-FMSAKMA 100 (114)
Q Consensus 56 l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~-~lta~eA 100 (114)
+....+.+.+.+..-.+-+|+++|.|...|.++..... -.+.+..
T Consensus 11 ~g~~l~~~r~~~g~s~~~la~~~gis~~~ls~~e~g~~~~p~~~~l 56 (198)
T 2bnm_A 11 FAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGGELTLTQL 56 (198)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTTCTTCBHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHH
Confidence 33334444433333456789999999999998887666 5665543
No 162
>3trb_A Virulence-associated protein I; mobIle and extrachromosomal element functions, DNA binding P; 2.00A {Coxiella burnetii}
Probab=23.01 E-value=87 Score=18.93 Aligned_cols=32 Identities=9% Similarity=0.170 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMAME 102 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~~ 102 (114)
..-+|+.+|.|...|.++.....-++.+.+..
T Consensus 30 q~eLA~~lGis~~~is~ie~G~~~~s~~~~~k 61 (104)
T 3trb_A 30 ANQLAKHLAIPTNRVTAILNGARSITADTALR 61 (104)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45578888888888888887766677776654
No 163
>2l49_A C protein; P2 bacteriophage, P2 C, direct repeats, DNA-binding protein, binding protein; NMR {Enterobacteria phage P2} PDB: 2xcj_A
Probab=22.93 E-value=72 Score=18.36 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
..-+|+.+|.+...|.++.......+.+..
T Consensus 20 q~~lA~~~gis~~~is~~e~g~~~p~~~~l 49 (99)
T 2l49_A 20 RQQLADLTGVPYGTLSYYESGRSTPPTDVM 49 (99)
T ss_dssp HHHHHHHHCCCHHHHHHHTTTSSCCCHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHH
Confidence 456888899999888888776665666554
No 164
>3ivp_A Putative transposon-related DNA-binding protein; APC62618, clostridium diffic structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile}
Probab=22.69 E-value=1.2e+02 Score=18.45 Aligned_cols=46 Identities=7% Similarity=0.041 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHH
Q psy5228 55 DIEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMA 100 (114)
Q Consensus 55 ~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA 100 (114)
.+....+.+...+..-..-+|+++|.|...|.++.......+.+..
T Consensus 12 ~~g~~lk~~R~~~glsq~~lA~~~gis~~~is~~E~g~~~p~~~~l 57 (126)
T 3ivp_A 12 ALGLAIKEARKKQGLTREQVGAMIEIDPRYLTNIENKGQHPSLQVL 57 (126)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHSCCCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHCCCCCCCHHHH
Confidence 3444444444444344567888999999999888776666666554
No 165
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=22.64 E-value=51 Score=27.79 Aligned_cols=40 Identities=18% Similarity=0.276 Sum_probs=33.9
Q ss_pred CCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCC
Q psy5228 5 KPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPL 46 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~ 46 (114)
..|..+++.|-|++.|+.+...++. .+|.+++.+.+--|.
T Consensus 246 ~IPqIsvV~G~c~GGgAY~paL~D~--vImv~~s~ifltGP~ 285 (758)
T 3k8x_A 246 DIFTITLVTCRSVGIGAYLVRLGQR--AIQVEGQPIILTGAP 285 (758)
T ss_dssp TSCEEEEECSCEETHHHHHHHHTCE--EEEETTCCEESSCHH
T ss_pred CCCEEEEEccCCchHHHHHHhhCCE--EEEECCceEEEeCHH
Confidence 3589999999999999999999998 899998877665553
No 166
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=22.58 E-value=83 Score=18.60 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=18.2
Q ss_pred HHHHHHHHHH-hCCCHHHHHhhhc
Q psy5228 68 QRLNEILSEK-TGHSVKKISQDTD 90 (114)
Q Consensus 68 ~~~~~~ya~~-tg~s~~~i~~~m~ 90 (114)
..+++.++++ +++|..++...++
T Consensus 4 ~eli~~ia~~~~~ls~~~~~~~l~ 27 (94)
T 1owf_B 4 SELIERLATQQSHIPAKTVEDAVK 27 (94)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHH
Confidence 4577888888 7999888887763
No 167
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=22.44 E-value=1.2e+02 Score=21.94 Aligned_cols=39 Identities=5% Similarity=-0.027 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhcC
Q psy5228 53 ASDIEIQAREILYLRQRLNEILSEKTGHSVKKISQDTDR 91 (114)
Q Consensus 53 ~~~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i~~~m~~ 91 (114)
...+.++.+.+.++-..+.+++++..|++.+.+.+.++.
T Consensus 128 r~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 166 (312)
T 3oox_A 128 KHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQD 166 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcC
Confidence 456788889999999999999999999998877777654
No 168
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=22.41 E-value=1e+02 Score=20.77 Aligned_cols=27 Identities=15% Similarity=-0.056 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhcCCc
Q psy5228 67 RQRLNEILSEKTGHSVKKISQDTDRDN 93 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~~~i~~~m~~~~ 93 (114)
-.+++...++.||+|.+++.+.+.+..
T Consensus 48 ~~~lv~~~s~~~g~~~~~ll~~fG~~~ 74 (189)
T 3tfg_A 48 TYHLVGAASEVLGKPAEEWWIAFGEYW 74 (189)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 346788899999999999998876543
No 169
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.23 E-value=72 Score=16.87 Aligned_cols=25 Identities=24% Similarity=0.267 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHh
Q psy5228 63 ILYLRQRLNEILSEKTGHSVKKISQ 87 (114)
Q Consensus 63 l~~~~~~~~~~ya~~tg~s~~~i~~ 87 (114)
-.++-+.+.+.+++.+|++.+.+.=
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v~V 41 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEVRV 41 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEE
Confidence 3456678889999999999887763
No 170
>3rmi_A Chorismate mutase protein; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid; 2.40A {Bartonella henselae}
Probab=22.16 E-value=1.4e+02 Score=18.58 Aligned_cols=32 Identities=19% Similarity=0.108 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Q psy5228 54 SDIEIQAREILYLRQRLNEILSEKTGHSVKKI 85 (114)
Q Consensus 54 ~~l~~~~~~l~~~~~~~~~~ya~~tg~s~~~i 85 (114)
.+|...-.+++.++..|++++++|.....+.-
T Consensus 12 ~~L~~lR~~ID~ID~~il~LL~~R~~~~~~I~ 43 (114)
T 3rmi_A 12 SELAYLRQSIDNFDITLIHILAERFRCTQAIG 43 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45777788888899999999999887544433
No 171
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=22.02 E-value=71 Score=16.72 Aligned_cols=33 Identities=9% Similarity=0.236 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHhh---hcCCce
Q psy5228 62 EILYLRQRLNEILSEKTGHSVKKISQD---TDRDNF 94 (114)
Q Consensus 62 ~l~~~~~~~~~~ya~~tg~s~~~i~~~---m~~~~~ 94 (114)
+-.++-+.+.+.+.+.+|.+.+.+.-. ++.+.|
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~v~v~i~e~~~~~w 50 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLERVRVLITEMPKNHF 50 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCEEEEEEECGGGE
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEEEEEEEeCHHHe
Confidence 345677788999999999998876643 344455
No 172
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=21.98 E-value=79 Score=16.39 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHhh---hcCCcee
Q psy5228 63 ILYLRQRLNEILSEKTGHSVKKISQD---TDRDNFM 95 (114)
Q Consensus 63 l~~~~~~~~~~ya~~tg~s~~~i~~~---m~~~~~l 95 (114)
-.++-+.+.+.+++.+|++.+.+.-. ++.+.|.
T Consensus 19 k~~l~~~l~~~l~~~lg~p~~~v~v~i~e~~~~~~~ 54 (63)
T 2x4k_A 19 LKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYG 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGCE
T ss_pred HHHHHHHHHHHHHHHhCcCcccEEEEEEEcCHHHee
Confidence 45567788889999999998876642 3444553
No 173
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=21.98 E-value=79 Score=16.49 Aligned_cols=26 Identities=31% Similarity=0.355 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHh
Q psy5228 62 EILYLRQRLNEILSEKTGHSVKKISQ 87 (114)
Q Consensus 62 ~l~~~~~~~~~~ya~~tg~s~~~i~~ 87 (114)
+-.++-+.+.+.+.+.+|.+.+.+.-
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~v~V 40 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEKIVV 40 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCEE
T ss_pred HHHHHHHHHHHHHHHHhCcCcCeEEE
Confidence 34566778899999999999887664
No 174
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=21.77 E-value=1.1e+02 Score=17.87 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHhhhcCCceecHHHHH
Q psy5228 63 ILYLRQRLNEILSEKTGHSVKKISQDTDRDNFMSAKMAM 101 (114)
Q Consensus 63 l~~~~~~~~~~ya~~tg~s~~~i~~~m~~~~~lta~eA~ 101 (114)
+.+.+..-..-+|+.+|.|...|.++..... .+.+...
T Consensus 32 lR~~~glTq~eLA~~~GiS~~tis~iE~G~~-~s~~~l~ 69 (88)
T 3t76_A 32 LLIDRDMKKGELREAVGVSKSTFAKLGKNEN-VSLTVLL 69 (88)
T ss_dssp HHHHTTCCHHHHHHHHTCCHHHHHHHHTTCC-CCHHHHH
T ss_pred HHHHcCCCHHHHHHHHCcCHHHHHHHHcCCC-cCHHHHH
Confidence 3333333456689999999999998876654 5666543
No 175
>2o38_A Hypothetical protein; alpha-beta, helix-turn-helix, structural genomics, PSI-2, PR structure initiative; 1.83A {Rhodopseudomonas palustris} SCOP: a.35.1.13
Probab=21.76 E-value=1.4e+02 Score=18.50 Aligned_cols=30 Identities=13% Similarity=0.040 Sum_probs=21.2
Q ss_pred HHHHHHHhCCCHHHHHhhhcCCc-eecHHHH
Q psy5228 71 NEILSEKTGHSVKKISQDTDRDN-FMSAKMA 100 (114)
Q Consensus 71 ~~~ya~~tg~s~~~i~~~m~~~~-~lta~eA 100 (114)
..-+|+++|.+...|.++..... -.+.+..
T Consensus 56 Q~eLA~~lGis~~~Is~iE~G~~~~~s~~~l 86 (120)
T 2o38_A 56 QAAAAARLGINQPKVSALRNYKLEGFSVERL 86 (120)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCCTTCCHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCCHHHH
Confidence 45688888888888888776655 5665543
No 176
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=21.44 E-value=87 Score=25.48 Aligned_cols=40 Identities=13% Similarity=0.018 Sum_probs=32.7
Q ss_pred CCCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCC
Q psy5228 5 KPNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPL 46 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~ 46 (114)
+.|+.+++.|-|.+.+++..++++. ..+.|++.+.+--|.
T Consensus 182 ~iP~Isvv~Gp~~gGgAy~a~~~~v--im~~~~a~i~~aGP~ 221 (588)
T 3gf3_A 182 GIPVIVGIYGTNPAGGGYHSISPTI--LIAHQDANMAVGGAG 221 (588)
T ss_dssp TCCEEEEECSEEETHHHHHHHSSSE--EEEETTCEEESSCCC
T ss_pred CCCEEEEEeCCCCchhhhHhhCCeE--EEEECCcEEEecChh
Confidence 5799999999999888877777765 667788888887776
No 177
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=20.94 E-value=72 Score=16.83 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhCCCH-HHHHhhhcCCce
Q psy5228 67 RQRLNEILSEKTGHSV-KKISQDTDRDNF 94 (114)
Q Consensus 67 ~~~~~~~ya~~tg~s~-~~i~~~m~~~~~ 94 (114)
++.++.-+...||.+. ++-...++...|
T Consensus 5 ~de~ia~F~~iTG~~d~~~A~~~Lea~nW 33 (45)
T 3e21_A 5 REMILADFQACTGIENIDEAITLLEQNNW 33 (45)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHcCC
Confidence 4566778888999885 888888877666
No 178
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=20.07 E-value=80 Score=25.64 Aligned_cols=39 Identities=8% Similarity=-0.003 Sum_probs=31.9
Q ss_pred CCCeEEEEehhhhhHHHHHHhcCCCCcEEecC-CceeeeecCC
Q psy5228 5 KPNVSTLCIGLAASMGAFLLASGTKGKRFSLP-NSRIMIHQPL 46 (114)
Q Consensus 5 ~~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p-~s~~miH~p~ 46 (114)
+.|+.+++.|-|.+.+++. +.++. .+|.. +|.+-+--|.
T Consensus 181 giP~Isvv~G~~~GGga~~-a~~d~--vim~e~~a~i~~~GP~ 220 (587)
T 1pix_A 181 GIPVIVGIYGTNPAGGGYH-SISPT--VIIAHEKANMAVGGAG 220 (587)
T ss_dssp TCCEEEEECSEEETHHHHH-HHSSS--EEEEETTCEEESCCCT
T ss_pred CCCEEEEEecCCcHHHHHH-HhcCc--eEEecCCcEEEecCHH
Confidence 5799999999999999999 76776 76766 5888887774
No 179
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=20.01 E-value=42 Score=26.80 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=34.6
Q ss_pred CCeEEEEehhhhhHHHHHHhcCCCCcEEecCCceeeeecCC
Q psy5228 6 PNVSTLCIGLAASMGAFLLASGTKGKRFSLPNSRIMIHQPL 46 (114)
Q Consensus 6 ~~V~t~~~G~aaS~as~i~~ag~~~~R~~~p~s~~miH~p~ 46 (114)
.|..+++.|-|.+.++..++.||. .+|.|++.+-+--|.
T Consensus 168 iP~Isvv~gp~~GG~a~s~~l~D~--ii~~~~a~i~~aGP~ 206 (523)
T 1on3_A 168 VPQIAIIAGPCAGGASYSPALTDF--IIMTKKAHMFITGPQ 206 (523)
T ss_dssp SCEEEEEEEEEESGGGHHHHHSSE--EEEETTCEEESSCHH
T ss_pred CCEEEEEcCCCchHHHHHHhhCCe--EEEeCCCEEEecCHH
Confidence 689999999999988888888998 899999998888775
Done!