BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5230
(258 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|300313635|ref|YP_003777727.1| methionyl-tRNA formyltransferase [Herbaspirillum seropedicae SmR1]
gi|300076420|gb|ADJ65819.1| methionyl-tRNA formyltransferase protein [Herbaspirillum
seropedicae SmR1]
Length = 317
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 153/313 (48%), Gaps = 71/313 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AA L+ LY + H I L+LT+PD +GRGM+L SPVK+ ALKH +
Sbjct: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCALKHGTPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+L+GKY ++A E H LL D+MIV ILP
Sbjct: 61 QPVSLRLDGKYPEVAQEAHALLRSTPHDVMIVAAYGLILPRSVLDIPRYGCINIHGSLLP 120
Query: 99 -----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTK---------- 129
+T +T+ E L +++I+++ + D T
Sbjct: 121 RWRGAAPIHRAIEAGDAETGITIMQMEEGLDTGPMMLIESLPISDEDTTGSLHDKLAALG 180
Query: 130 ---------------LFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
L PQ G +YA I K EA LD+S SA+ + R+I AFNPFPG
Sbjct: 181 AKMIVEAMEKLEQGTLPATPQPEQGANYAAKIAKEEAALDFSQSAEQLARRIRAFNPFPG 240
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A + +K+WKA A+++ +PG +L+ + GI+V CG+ + L ELQK
Sbjct: 241 ATGRF-----GDTVVKLWKARAVTVAQQGEPGQVLSADAQGGIVVACGEGALLLTELQKP 295
Query: 235 NKKKISATEFING 247
K++ A EF+ G
Sbjct: 296 GGKRLPAAEFLKG 308
>gi|415945715|ref|ZP_11556427.1| Methionyl-tRNA formyltransferase [Herbaspirillum frisingense GSF30]
gi|407758270|gb|EKF68118.1| Methionyl-tRNA formyltransferase [Herbaspirillum frisingense GSF30]
Length = 317
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 152/313 (48%), Gaps = 71/313 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AA L+ LY + H I L+LT+PD +GRGM+L SPVK+ ALKH +
Sbjct: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCALKHGTPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+LNGKY ++A E H LL D+M+V ILP
Sbjct: 61 QPVSLRLNGKYPEVAQEAHALLQSTPHDVMVVAAYGLILPRSVLDIPRYGCINIHGSLLP 120
Query: 99 -----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMT----------- 128
+T +T+ E L +++I+++ + D T
Sbjct: 121 RWRGAAPIHRAIEAGDTETGITIMQMEEGLDTGPMMLIESLPITDEDTTGSLHDKLAALG 180
Query: 129 --------------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
L PQ G +YA I K EA LD+S SA+ + R+I AFNPFPG
Sbjct: 181 GRMIVEAIEKLEQGALPATPQPEEGANYAAKIAKEEAALDFSQSAQQLARRIRAFNPFPG 240
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A + +K+W+A +++ +PG +L+ + GI+V CG+ + L ELQK
Sbjct: 241 ATGRF-----GDTVVKLWQARPVTVAQQGEPGQVLSADAQGGIVVTCGEGALLLTELQKP 295
Query: 235 NKKKISATEFING 247
K++ A EF+ G
Sbjct: 296 GGKRLPAAEFLKG 308
>gi|409408140|ref|ZP_11256584.1| methionyl-tRNA formyltransferase [Herbaspirillum sp. GW103]
gi|386432596|gb|EIJ45423.1| methionyl-tRNA formyltransferase [Herbaspirillum sp. GW103]
Length = 317
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 152/313 (48%), Gaps = 71/313 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AA L+ LY + H I L+LT+PD +GRGM+L SPVK+ A+KH +
Sbjct: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCAIKHGTPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+LNGKY ++A E H LL D+M+V ILP
Sbjct: 61 QPVSLRLNGKYPEVAQEAHALLQSTPHDVMVVAAYGLILPRSVLDIPRYGCINIHGSLLP 120
Query: 99 -----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMT----------- 128
+T +T+ E L +++I+++ D T
Sbjct: 121 RWRGAAPIHRAIEAGDAETGITIMQMEEGLDTGPMMLIESVPIAGDDTTGSLHDKLAALG 180
Query: 129 --------------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+L PQ + G +YA I K EA LD+S SA + R+I AFNPFPG
Sbjct: 181 GKMIVEAIAKLERGELSATPQPDEGANYAAKIAKEEAALDFSQSADQLARRIRAFNPFPG 240
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A + +K+W+A + + +PG +L+ + GI+V CG+ + L ELQK
Sbjct: 241 ATGRF-----GDTVVKLWQARPVKVAQQGEPGQVLSADAQGGIVVACGEGALLLTELQKP 295
Query: 235 NKKKISATEFING 247
K+++A EF+ G
Sbjct: 296 GGKRLAAAEFLKG 308
>gi|399021097|ref|ZP_10723216.1| methionyl-tRNA formyltransferase [Herbaspirillum sp. CF444]
gi|398093081|gb|EJL83471.1| methionyl-tRNA formyltransferase [Herbaspirillum sp. CF444]
Length = 317
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 154/313 (49%), Gaps = 71/313 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKII+AGT AAA L+ LY + H+I L+LT+PD +GRGM+L+ SPVK+ A+ H +
Sbjct: 1 MKIIYAGTPEFAAAALEALYAAGHDITLVLTQPDRPAGRGMQLHASPVKQCAVAHGTPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+L+GKY ++A E H+LL D+MIV ILP
Sbjct: 61 QPVSLRLDGKYPEVAREAHELLRNTPHDVMIVAAYGLILPRSVLDIPRLGCINIHGSLLP 120
Query: 99 -----------------DTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKLF 131
+T +T+ E L I + DT + + L
Sbjct: 121 RWRGAAPIHRAIEAGDSETGITIMQMEEGLDTGPMLLIESLPIAVTDTTGSLHDKLAALG 180
Query: 132 FK-----------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
K PQ G +YA I K EA LD++ +A + RKI AFNPFPG
Sbjct: 181 AKMIVDAVQKLEQGQLPATPQPEEGANYAAKISKEEAALDFTQTAPVLARKIRAFNPFPG 240
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A S Q +K+W+A A+ ++ PG+IL N H+G+ V CG V+++ ELQK
Sbjct: 241 A-----SAQCGDVTVKLWQAQAIDETTSAAPGSILAANAHDGVKVACGAGVLQVTELQKP 295
Query: 235 NKKKISATEFING 247
K++ A EF+ G
Sbjct: 296 GGKRLPAAEFLKG 308
>gi|323524424|ref|YP_004226577.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1001]
gi|323381426|gb|ADX53517.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1001]
Length = 328
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 145/314 (46%), Gaps = 72/314 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT A+A L ++ + + L+LT+PD +GRGMKL SPVK+YA++H + +
Sbjct: 5 LRVVFAGTPEFASAALAAIHGAGFPVPLVLTQPDRPAGRGMKLQASPVKRYAVEHGLAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ GKY A + L D+M+V ILP+
Sbjct: 65 QPPSLRRAGKYPGEAAAAIEQLRATPHDVMVVAAYGLILPQEVLDIAPFGCINIHASLLP 124
Query: 99 -----------------DTSLTLQNKLEKL-SKILIIDTIKKIEYDMT------------ 128
+T +TL L + +I +T I D T
Sbjct: 125 RWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGAMISETRTPISADDTTASLHDRLAQDG 184
Query: 129 ---------------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
KL PQ G +YA I K+EA LDW A + R++ AF+PFP
Sbjct: 185 ARLIVEALVELERSGKLSATPQPADGVTYAEKIGKHEAALDWRRPAAALARQVRAFDPFP 244
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
G ++ +KIW A A ++ST PGT+++V+ G+LV CG+ ++L +LQK
Sbjct: 245 GG----VATLEDGTAIKIWAASAEVVKSTAAPGTLISVS-PEGVLVACGEGALRLTQLQK 299
Query: 234 NNKKKISATEFING 247
K++ EF+ G
Sbjct: 300 PGGKRLPVREFLAG 313
>gi|340789289|ref|YP_004754754.1| methionyl-tRNA formyltransferase [Collimonas fungivorans Ter331]
gi|340554556|gb|AEK63931.1| Methionyl-tRNA formyltransferase [Collimonas fungivorans Ter331]
Length = 339
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 146/311 (46%), Gaps = 71/311 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AA L L+++ H + L+LT+PD +GRGM+L+ SPVK++AL H I +
Sbjct: 23 MKIIFAGTPEFAAVALKALHDAGHQVPLVLTQPDRPAGRGMQLHASPVKQFALDHQIAVA 82
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP+SL+L+GKY +A E H LL DIM+V ILP
Sbjct: 83 QPVSLRLDGKYPDVAREAHALLQATPHDIMVVAAYGLILPSSVLDIPPRGCLNIHGSLLP 142
Query: 98 ----------------EDTSLTLQNKLEKL--SKILII--------DTIKKIEYDMTKLF 131
+T +T+ + L +L+I DT + M KL
Sbjct: 143 RWRGAAPIHRAIEAGDSETGITIMQMDQGLDTGAMLLIEKMTIGASDTTGTLHDKMAKLG 202
Query: 132 FK-----------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
PQ G +YA I K EA LD+SL A+ + RKI AFN
Sbjct: 203 GDLIVEALRRLEQNVLPATPQPEQGVTYAAKISKEEAALDFSLPAEVLERKIRAFN---- 258
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ LK+W+A ++ + GT+++ + +G++V CG +++ ELQK
Sbjct: 259 -PFPAAAAVFAGVTLKLWQAQVIAADGKHAAGTVISADPQDGVIVACGSGALRITELQKP 317
Query: 235 NKKKISATEFI 245
K++ A EF+
Sbjct: 318 GGKRLPAAEFL 328
>gi|383756316|ref|YP_005435301.1| methionyl-tRNA formyltransferase Fmt [Rubrivivax gelatinosus IL144]
gi|381376985|dbj|BAL93802.1| methionyl-tRNA formyltransferase Fmt [Rubrivivax gelatinosus IL144]
Length = 313
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 136/311 (43%), Gaps = 72/311 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+ FAGT A LD + + + L+LT+PD +GRGMKL SPVK+ AL H + +
Sbjct: 1 MRAAFAGTPEFARVALDAMLAAGIEVPLVLTQPDRPAGRGMKLQASPVKQCALAHGLPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+L+GKY A L + D+++V ILP+
Sbjct: 61 QPRSLRLDGKYPDEAAAGRAALEQAAPDVLVVAAYGLILPQWVLDLPRLGCINIHGSLLP 120
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L L K S ++ D +D
Sbjct: 121 RWRGAAPIHRAIEAGDAETGITIMQMDAGLDTGPMLLKESLVIAADDTTATLHDKLAALG 180
Query: 127 ----------MTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAK 176
+ L +PQ G +YA I+K E +DW+L A I R++ AF+PFPG
Sbjct: 181 ARLVVDALGRLDALPPQPQPEAGANYAAKIEKAEGAVDWTLPAAVIERRVRAFDPFPG-- 238
Query: 177 TYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
S+ + K+W+A ++ + +PG +L G++V CG+ ++L ELQ+
Sbjct: 239 ---CSFTLDGEAFKLWRAAVVA--GSGEPGRVLAAG-EGGLVVACGEGALELRELQRTGG 292
Query: 237 KKISATEFING 247
+++ A EF+ G
Sbjct: 293 RRVPAREFLKG 303
>gi|445494840|ref|ZP_21461884.1| methionyl-tRNA formyltransferase Fmt [Janthinobacterium sp. HH01]
gi|444791001|gb|ELX12548.1| methionyl-tRNA formyltransferase Fmt [Janthinobacterium sp. HH01]
Length = 318
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 139/314 (44%), Gaps = 72/314 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AA L L+ + I L+LT+PD +GRGM L S VK+YAL I+++
Sbjct: 1 MKVIFAGTPEFAAVALQALHEAGFEIPLVLTQPDRPAGRGMHLQPSAVKQYALAQGIEVL 60
Query: 61 QPISLKLNGK---YHKIANETHKLLNKIEFDIMIVMG---ILPE---------------- 98
QP+SL+ + K + A E H L +D+M+V ILP
Sbjct: 61 QPLSLRTDSKDPVRAEQAKEAHARLLSTPYDVMVVAAYGLILPRATLDIKPCLNIHGSLL 120
Query: 99 ------------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKP---- 134
+T +T+ E L +L+I+ I E D T +
Sbjct: 121 PRWRGAAPIHRAIEAGDTETGITIMEMEEGLDTGPMLLIERIAIGEQDTTGIVHDKLAAL 180
Query: 135 ---------------------QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
Q G +YA I K EA LD++ SA I RKI AFNPFP
Sbjct: 181 GGKMIVEALRKMQHGQLEAVVQPEAGVNYAAKISKEEAALDFTQSAVEIGRKIRAFNPFP 240
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
GA +K+W A L +S G +L + +GI+V CG ++L ELQK
Sbjct: 241 GAHATVNGVN-----VKLWGAEVLEADSKGPAGRVLAADAQHGIVVACGSGSLRLTELQK 295
Query: 234 NNKKKISATEFING 247
K++ A EFI G
Sbjct: 296 PGGKRLPAAEFIKG 309
>gi|350544371|ref|ZP_08913990.1| Methionyl-tRNA formyltransferase [Candidatus Burkholderia kirkii
UZHbot1]
gi|350527836|emb|CCD37198.1| Methionyl-tRNA formyltransferase [Candidatus Burkholderia kirkii
UZHbot1]
Length = 329
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 153/325 (47%), Gaps = 78/325 (24%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
++FAGT AAA L ++ + ++ L+LT+PD +GRGMKL SPVK++A++H +K+ QP
Sbjct: 1 MVFAGTPEFAAAALTAIHAAGFSVPLVLTQPDRPAGRGMKLTASPVKRFAVEHGLKVAQP 60
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE--------------------- 98
SL+ GKY + A E LL D+M+V ILP+
Sbjct: 61 ASLRRTGKYPQEAAEAIDLLRATPHDVMVVAAYGLILPQEVLDIPPRGAINIHASLLPRW 120
Query: 99 ---------------DTSLTLQNK----------LEKLSKILIIDT-------------- 119
+T +TL E + IL+ DT
Sbjct: 121 RGAAPIHRAIEAGDAETGITLMQMDAGLDTGAMIREARTPILVDDTTATLHDRLAHMGAE 180
Query: 120 -----IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
++ +E D + L PQ G +YA I K+EA LDW A+ + R++ AF+PFPG
Sbjct: 181 LIVAGLRDLERDGS-LASTPQPEQGTTYAEKIAKHEAALDWRRPAEELARQVRAFDPFPG 239
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIES-TKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
A + + + +KIW A + S +PGTI ++ +GI+VVCG +KL LQ+
Sbjct: 240 A---FGTLDDTA--IKIWAAQPVGASSGAGEPGTIAEIS-PDGIVVVCGSGALKLTYLQR 293
Query: 234 NNKKKISATEFINGC--IKNIKYFI 256
K++ EF G +K ++ +
Sbjct: 294 PGGKRLPVREFFAGAPLVKGQRFVL 318
>gi|307728143|ref|YP_003905367.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1003]
gi|307582678|gb|ADN56076.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1003]
Length = 328
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 139/314 (44%), Gaps = 72/314 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT AAA L ++ + + L+LT+PD +GRGMKL SPVK+YA++H + +
Sbjct: 5 LRVVFAGTPEFAAAALAAIHGAGFPVPLVLTQPDRPAGRGMKLQASPVKRYAVEHGLALA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
QP SL+ G+Y A L D+M+V ILP++
Sbjct: 65 QPQSLRRAGRYPAEAAAAIDQLRATPHDVMVVAAYGLILPQEVLDIAPFGCINIHASLLP 124
Query: 100 ------------------TSLTLQNKLEKL-SKILIIDTIKKIEYDMT------------ 128
T +TL L + +I +T I D T
Sbjct: 125 RWRGAAPIHRAIEAGDAQTGITLMQMDAGLDTGAMISETRTPISADDTTATLHDRLAQDG 184
Query: 129 ---------------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
KL PQ G +YA I K+EA LDW A + R++ AF+PFP
Sbjct: 185 ARLIVEALVELEKSGKLTSTPQPADGVTYAEKIGKHEAALDWRRPAAALARQVRAFDPFP 244
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
G + +KIW A A + S PGT++ V+ G++V CG+ + L +LQK
Sbjct: 245 GG----VGTLEDGTSIKIWAATAENATSHAAPGTVIGVSA-EGVVVACGEGALCLTQLQK 299
Query: 234 NNKKKISATEFING 247
K++ EF+ G
Sbjct: 300 PGGKRLPVREFLAG 313
>gi|387903640|ref|YP_006333979.1| methionyl-tRNA formyltransferase [Burkholderia sp. KJ006]
gi|387578532|gb|AFJ87248.1| Methionyl-tRNA formyltransferase [Burkholderia sp. KJ006]
Length = 327
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 137/314 (43%), Gaps = 73/314 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YA++H + +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMPVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ GK+ A E +LL D+M+V +LP+
Sbjct: 65 QPTSLRRAGKFPAEAAEAIELLRATPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLLP 124
Query: 99 -----------------DTSLTLQNKLEKLSKILIIDTIK--------------KIEYDM 127
+T +TL L +ID + ++ D
Sbjct: 125 RWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIDEARIAIAPDDTTATLHDRLAADG 184
Query: 128 TKLFFK--------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
+L PQ G +YA I K+EA LDW A + R++ AF+PFP
Sbjct: 185 ARLIVAALERLERDGALPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDPFP 244
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
G +K+W A ++ PGTI+ G++V CG +++ +LQK
Sbjct: 245 GGVATL-----DGAAIKLWAAEPVAARGDAAPGTIVEAA-PEGVIVACGAGALRVTQLQK 298
Query: 234 NNKKKISATEFING 247
K++ A EF+ G
Sbjct: 299 PGGKRLPAREFLAG 312
>gi|238028944|ref|YP_002913175.1| methionyl-tRNA formyltransferase [Burkholderia glumae BGR1]
gi|237878138|gb|ACR30471.1| Methionyl-tRNA formyltransferase [Burkholderia glumae BGR1]
Length = 327
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 140/316 (44%), Gaps = 75/316 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YAL H + +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFAVPLVLTQPDRPAGRGMKLQASAVKRYALDHGMPVA 64
Query: 61 QPISL---------------KLNGKYHKI------------------------------- 74
QP SL +L H +
Sbjct: 65 QPPSLRRTGKYPAEAAEALDRLRATPHDVMVVAAYGLLLPQEVLEMPPRGCINIHASLLP 124
Query: 75 ----ANETHKLLNK---------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLS 112
A H+ L ++ D+ + G I ++T+ +L +KL +
Sbjct: 125 RWRGAAPIHRALEAGDAQTGVTLMQMDVGLDTGAMLSEGRVAIAADETTASLHDKLAQTG 184
Query: 113 KILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
LI++ + ++E D +L PQ G +YA I K+EA LDW A + R+I AF+PF
Sbjct: 185 ARLIVEALVQLERD-GELAATPQPADGVTYAEKIGKHEAALDWREPAAVLARRIRAFDPF 243
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
PG +K+W A + +PGTI+ G+++ CG+ +++ +LQ
Sbjct: 244 PGGAGTL-----DGTVIKLWAAEPVVASGAAEPGTIVEAGA-GGVVIACGEGALRVTQLQ 297
Query: 233 KNNKKKISATEFINGC 248
K K++ A EF+ G
Sbjct: 298 KPGGKRLPAREFLAGA 313
>gi|237746967|ref|ZP_04577447.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes HOxBLS]
gi|229378318|gb|EEO28409.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes HOxBLS]
Length = 316
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 155/323 (47%), Gaps = 80/323 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT A+ L+ L + H I L+LT+PD SGRGMKL S VKK A+ I +
Sbjct: 1 MKIVFAGTPEFASTALNALVRAGHQIGLVLTQPDRPSGRGMKLQASAVKKLAVSEGIPVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP+SL+L+G++ + A + ++ + +IE D+M+V+ ILP
Sbjct: 61 QPVSLRLDGRHGEEAKKVYERIARIEPDVMVVVAYGLILPKVFLELPKYGCLNIHASLLP 120
Query: 98 ----------------EDTSLTLQNKLEKL--SKILIIDTIKKIEYD------------- 126
E T +++ E L +L+ +T+ IE D
Sbjct: 121 RWRGAAPIQRAIEAGDEKTGVSIMQMEEGLDTGPVLLKETV-AIEKDDNASRLHDKLADL 179
Query: 127 MTKLFFKPQSNIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFP 173
++L + + E+ A ++E A ++++ SA I+ KI AF+PFP
Sbjct: 180 GSRLILSALNQLAENSARFTVQDEDAAIYAAKIRKEEATVNFTFSATEIVNKIRAFDPFP 239
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
G Y + +KIWKA K G I++VN +GI+V C ++ +++LELQK
Sbjct: 240 GCIAKY-----RNIPIKIWKAENAGSYPGTKAGQIVSVN-ESGIVVGCVEDSVRILELQK 293
Query: 234 NNKKKISATEFI------NGCIK 250
K++SA EFI NGC +
Sbjct: 294 PGGKRLSAAEFIKGFSFENGCFE 316
>gi|269140541|ref|YP_003297242.1| methionyl-tRNA formyltransferase [Edwardsiella tarda EIB202]
gi|387869013|ref|YP_005700482.1| Methionyl-tRNA formyltransferase [Edwardsiella tarda FL6-60]
gi|267986202|gb|ACY86031.1| methionyl-tRNA formyltransferase [Edwardsiella tarda EIB202]
gi|304560326|gb|ADM42990.1| Methionyl-tRNA formyltransferase [Edwardsiella tarda FL6-60]
Length = 315
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 144/312 (46%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L S+H IV + T+PD SGRG KL SPVK AL+H + +
Sbjct: 5 LRIIFAGTPDFAARHLEALLASDHQIVGVFTQPDRPSGRGNKLTPSPVKALALQHDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPASLR--------PEENQRLVASLQADVMVVVAYGLILPQAVLDMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KLS + D YD
Sbjct: 117 RWRGAAPIQRALWAGDSETGVTIMQMDVGLDTGDMLLKLSCPVTQDDTSATLYDKLAALG 176
Query: 127 ----MTKLF--------FKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+T L + Q + +YA + K EA LDWSLSA+ + R + AFNP+P
Sbjct: 177 PQGLLTTLSQLADDTAQAQKQDDALSTYAEKLSKEEARLDWSLSAEQLARCVRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
++++ +++ +K+W+A ALS +T PGTI++ + GI V + V+ L +LQ
Sbjct: 236 -VSFFML---EEQSVKVWEATALSQHATAAPGTIVSAD-KQGIAVATAQGVLLLTQLQPA 290
Query: 235 NKKKISATEFIN 246
KK ++A + +N
Sbjct: 291 GKKSMTARDLLN 302
>gi|91774542|ref|YP_544298.1| methionyl-tRNA formyltransferase [Methylobacillus flagellatus KT]
gi|122985660|sp|Q1H4Y0.1|FMT_METFK RecName: Full=Methionyl-tRNA formyltransferase
gi|91708529|gb|ABE48457.1| methionyl-tRNA formyltransferase [Methylobacillus flagellatus KT]
Length = 308
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKII+AGT A L L S H + L+LT+PD +GRG+KL SPVK AL+H I ++
Sbjct: 1 MKIIYAGTPDFAVPALRALIQSSHEVSLVLTQPDRPAGRGLKLKPSPVKSLALEHGIPLL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGILP----------------------- 97
QP +LK +IA E L + ++I +L
Sbjct: 61 QPETLKDEAVQARIAAEHADALVVAAYGLIIPATVLSMPRYGCYNIHASLLPRWRGAAPI 120
Query: 98 --------EDTSLTLQNKLEKL--SKILIIDTIKKIEYDMT------------------- 128
++T +T+ + L +++ T+ E+D
Sbjct: 121 QRALLAGDKETGVTIMEVVPALDAGAMILRGTLPITEHDTAQTLHDGLAEIGAELMLQAM 180
Query: 129 -------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+L +PQ +YA ++K EAV+DW +A + R++ AFNPFP A +
Sbjct: 181 DKLEREGRLEAEPQDESLVTYAQKLQKAEAVIDWRKNADELSRQVRAFNPFPVAHSTL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
K + +IW A A+S T +PG I +V+ NGILV CG+ ++++ ELQ K++ A
Sbjct: 239 ---KGETCRIWMAQAVS--GTAEPGMIASVD--NGILVGCGRGLLRIDELQLPGGKRLQA 291
Query: 242 TEFING 247
+F+ G
Sbjct: 292 KDFLAG 297
>gi|257091705|ref|YP_003165346.1| methionyl-tRNA formyltransferase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044229|gb|ACV33417.1| methionyl-tRNA formyltransferase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 308
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 134/302 (44%), Gaps = 63/302 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT AA L + + H +VL+LT+PD SGRGM L SPVK+ A +++
Sbjct: 1 MRLVFAGTPEFAALALRQILAAGHQVVLVLTQPDRPSGRGMALRASPVKELANAAGLEVF 60
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNKIEFDIMI 91
QP +L+ L+ H N LL + I
Sbjct: 61 QPPTLRDALVQQRIRAAGAEAMVVAAYGLILPQAVLDMPSHGCINIHASLLPRWRGAAPI 120
Query: 92 VMGILPEDTS-----LTLQNKLEK----LSKILII---DTIKKIEYDMTKLFFK------ 133
IL D + ++ L+ LS + I DT + + L +
Sbjct: 121 QRAILAGDQETGVSIMQMEAGLDSGPVLLSASVPISDTDTAASLHETLALLGARLVVDVL 180
Query: 134 --------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
PQ +G +YA I K EA LDW A + R++ AFNPFPG+
Sbjct: 181 ARLPLPASPQPEVGITYAAKIDKAEASLDWHRPAWQLARQVRAFNPFPGSTCCLDDVP-- 238
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
LK+W+A A + +PG +L V +G++V CG+ ++L ELQK +++SA +++
Sbjct: 239 ---LKVWRAEA--VAGDGRPGMVLRVE-RDGVVVACGEQALRLGELQKAGGRRLSAAQYL 292
Query: 246 NG 247
G
Sbjct: 293 AG 294
>gi|374370225|ref|ZP_09628234.1| methionyl-tRNA formyltransferase [Cupriavidus basilensis OR16]
gi|373098227|gb|EHP39339.1| methionyl-tRNA formyltransferase [Cupriavidus basilensis OR16]
Length = 342
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 137/316 (43%), Gaps = 76/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L+ ++ + +V + ++PD +GRG++L SPVK+YAL+ + +
Sbjct: 16 LRVAFAGTPEFARVALEAIHAAGFPVVAVFSQPDRPAGRGLQLQASPVKQYALEQGLGPV 75
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED----------------- 99
+QP SL+ NGKY + A L +I D+M+V ILP +
Sbjct: 76 LQPRSLRRNGKYPEEAGAAVDALAQIAPDVMVVAAYGLILPAEVLALPRYGCLNIHASLL 135
Query: 100 -------------------TSLTLQNKLEKLSKILII-----------------DTIKKI 123
T +TL E L +I DT+ +
Sbjct: 136 PRWRGAAPIHRAIEAGDAQTGITLMQMDEGLDTGAMIQGETVPIGPDDTTGTLHDTLAAL 195
Query: 124 EYDMT-----------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
M L PQ G +YA I K EA LD A + ++ AFNPF
Sbjct: 196 GGRMVVDALRRLAAGQPLAATPQPAEGVTYAEKIAKEEAPLDLHRPATVLGAQVRAFNPF 255
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKK--PGTILNVNFHNGILVVCGKNVIKLLE 230
PGA + Q + +K W+A L+ + PGT+L + +G+++ CG+ +++ E
Sbjct: 256 PGA-----TVQVGQTVIKCWQAQPLTAAGGQPQVPGTVLAAD-ADGVVIACGEGALRVTE 309
Query: 231 LQKNNKKKISATEFIN 246
LQK + + A F+
Sbjct: 310 LQKPGGRPVPAQLFLQ 325
>gi|432609321|ref|ZP_19845502.1| methionyl-tRNA formyltransferase [Escherichia coli KTE67]
gi|431135632|gb|ELE37507.1| methionyl-tRNA formyltransferase [Escherichia coli KTE67]
Length = 315
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKI---------------------------------------------- 74
QP+SL+ ++
Sbjct: 65 QPVSLRPQENQQRVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A + + ++ D+ + G I EDTS TL +KL +L +I T+
Sbjct: 125 QRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
K++ K + ++ + +YA + K EA +DWSLSA + R I AFNP+P ++
Sbjct: 185 KQLADGTAKPEVQGETLV--TYAEKLSKEEARIDWSLSAAQLERCIRAFNPWP---MSWL 239
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ + +K+WKA + + PGTIL N GI V G ++ LL +Q KK +S
Sbjct: 240 EIEGQP--VKVWKASVIDTTTKAAPGTILEAN-KQGIQVATGDGILNLLSMQPAGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDLLN 302
>gi|238921410|ref|YP_002934925.1| methionyl-tRNA formyltransferase, putative [Edwardsiella ictaluri
93-146]
gi|259646030|sp|C5BF18.1|FMT_EDWI9 RecName: Full=Methionyl-tRNA formyltransferase
gi|238870979|gb|ACR70690.1| methionyl-tRNA formyltransferase, putative [Edwardsiella ictaluri
93-146]
Length = 315
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 139/312 (44%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L S+H IV + T+PD SGRG KL SPVK AL+H + +
Sbjct: 5 LRIIFAGTPDFAARHLEALLASDHQIVGVFTQPDRPSGRGNKLTPSPVKALALQHDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPASLR--------PEENQRLVASLQADVMVVVAYGLILPQAVLDMPRLGCVNVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KLS ++ D YD
Sbjct: 117 RWRGAAPIQRALWAGDSETGVTIMQMDAGLDTGDMLLKLSCLITQDDTSATLYDKLSALG 176
Query: 127 ----MTKLF--------FKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+T L + Q + YA + K EA LDW L A+ + R + AFNP+P
Sbjct: 177 PQGLLTTLAQLADGRAQAQQQDDALACYAEKLSKEEARLDWQLPAEQLARCVRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
++++ + + +K+W A+ L ES +PGTI+ + GI V + ++ L +LQ
Sbjct: 236 -VSFFML---EGQPVKVWGANVLHQESDAQPGTIVGAD-KQGIAVATAQGILLLTQLQPA 290
Query: 235 NKKKISATEFIN 246
KK ++A + +N
Sbjct: 291 GKKSMAARDLLN 302
>gi|415776512|ref|ZP_11488033.1| methionyl-tRNA formyltransferase [Escherichia coli 3431]
gi|315617090|gb|EFU97700.1| methionyl-tRNA formyltransferase [Escherichia coli 3431]
Length = 315
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 136/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+ E +L+ +++ D+M+V+ ILP+
Sbjct: 65 QPVSLR--------PQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KLS + + YD
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELG 176
Query: 127 ----------MTKLFFKPQSNIGE--SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ KP+ G +YA + K EA +DWSLSA + R I AFNP+P
Sbjct: 177 PQGLITTLKQLADGTAKPEVQDGTLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
++ + + +K+WKA + + PGTIL N GI V G ++ LL LQ
Sbjct: 236 --MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-KQGIQVATGDGILNLLSLQPA 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKAMSAQDLLN 302
>gi|242237891|ref|YP_002986072.1| methionyl-tRNA formyltransferase [Dickeya dadantii Ech703]
gi|242129948|gb|ACS84250.1| methionyl-tRNA formyltransferase [Dickeya dadantii Ech703]
Length = 313
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 134/312 (42%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S H IV + T+PD +GRG KL SPVK A I +
Sbjct: 3 LRIIFAGTPDFAARHLDALLTSRHEIVGVFTQPDRPAGRGNKLTPSPVKVLAECKGIPVF 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 63 QPKSLR--------PEENQQLIAALQADVMVVVAYGLILPQTVLDIPRLGCINVHGSLLP 114
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L K+ ++ D YD
Sbjct: 115 KWRGAAPIQRSLWAGDAETGITIMQMDAGLDTGDMLYKMECPILPDDTSATLYDKLAELG 174
Query: 127 ----------MTKLFFKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ KP Q+N +YA + K EA LDW LSA + R I AFNP+P
Sbjct: 175 PQGLLITLEQLASAQTKPEPQNNALATYAEKLSKEEARLDWQLSAAQLERCIRAFNPWP- 233
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
Y + ++ LK+WKA AL I+ K PGTI++ N H GI V V+ + LQ +
Sbjct: 234 --MSYFTVDDQP--LKVWKAEALDIKHNKHPGTIIDANKH-GIQVATTDGVLNMQMLQPS 288
Query: 235 NKKKISATEFIN 246
KK + A + +N
Sbjct: 289 GKKAMPAQDLLN 300
>gi|441506696|ref|ZP_20988654.1| Methionyl-tRNA formyltransferase [Photobacterium sp. AK15]
gi|441425637|gb|ELR63141.1| Methionyl-tRNA formyltransferase [Photobacterium sp. AK15]
Length = 314
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 138/313 (44%), Gaps = 82/313 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +S+H ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSQHEVIAVYTQPDRPAGRGKKLTASPVKNIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP SL+ E + L + DIM+V+ ILP
Sbjct: 65 QPASLR--------NEEAQQELAALNADIMVVVAYGLLLPTEVLETPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
+T +T+ E L +L I T+ D + ++ + +G
Sbjct: 117 RWRGAAPIQRSIWAGDKETGVTIMQMDEGLDTGDMLKIATLPIEATDTSATMYEKLAELG 176
Query: 140 ES-------------------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
YA + K EA +DWS+ A I R I AFNP+P
Sbjct: 177 PDALIDCLGDIADGTAVPEKQNDDLANYAKKLSKEEAKVDWSMDAAAIERCIRAFNPWP- 235
Query: 175 AKTYY-ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
+Y+ ++ QN +K+WKA + K PGTIL + H GILV G+ ++L ELQ
Sbjct: 236 -MSYFAVAEQN----IKVWKAEVEADNQGKAPGTILAADKH-GILVATGEGALRLTELQP 289
Query: 234 NNKKKISATEFIN 246
KK + A + +N
Sbjct: 290 PGKKAMKAQDLLN 302
>gi|422831893|ref|ZP_16880024.1| methionyl-tRNA formyltransferase [Escherichia coli B093]
gi|371615975|gb|EHO04351.1| methionyl-tRNA formyltransferase [Escherichia coli B093]
Length = 315
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 137/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKL- 130
D L + L KLS I DT + Y + +L
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYYKLAELG 176
Query: 131 --------------FFKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
KP Q +YA + K EA +DWSLSA + R I AFNP+P
Sbjct: 177 PQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
++ + + +K+WKA + + PGTIL N GI V G ++ LL LQ
Sbjct: 236 --MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-KQGIQVATGDGILNLLSLQPA 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKAMSAQDLLN 302
>gi|269103776|ref|ZP_06156473.1| methionyl-tRNA formyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163674|gb|EEZ42170.1| methionyl-tRNA formyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 314
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 144/305 (47%), Gaps = 66/305 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKHIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMI--------------VMG-ILPE------- 98
QP SL+ ++A L+ + + +++ V G ILP
Sbjct: 65 QPASLRNEEAQQELAALNADLMVVVAYGLLLPKEVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG-------- 139
+T +T+ E L +L I T+ D + ++ + +G
Sbjct: 125 QRSIWAGDSETGVTIMQMDEGLDTGDMLQIATLPIEANDTSATMYEKLAELGPVALVDCL 184
Query: 140 -----------------ESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY-IS 181
+YA + K EA +DW++ A I R + AFNP+P +Y+ +S
Sbjct: 185 ADIATGKAVATKQDDEQANYAKKLSKEEAKIDWTMDAVAIERCVRAFNPWP--MSYFEVS 242
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
QN +K+W++ ++ + K+PGTIL+ + H GI+V G ++LLELQ KK +
Sbjct: 243 EQN----IKVWRSEVVAEDHGKQPGTILSADKH-GIVVATGHGALRLLELQPPGKKAMQV 297
Query: 242 TEFIN 246
+ +N
Sbjct: 298 QDLLN 302
>gi|188535244|ref|YP_001909041.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (FMet)
N-formyltransferase [Erwinia tasmaniensis Et1/99]
gi|238692006|sp|B2VK94.1|FMT_ERWT9 RecName: Full=Methionyl-tRNA formyltransferase
gi|188030286|emb|CAO98175.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (FMet)
N-formyltransferase [Erwinia tasmaniensis Et1/99]
Length = 315
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 138/306 (45%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA LD L +S H +V + T+PD +GRG ++ SPVK+ A +H+I +
Sbjct: 5 LKIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAGRGNRVTASPVKQLAAQHNIPVF 64
Query: 61 QPIS-----------------------------LKLNGKYHKIANETHKLLNK------- 84
QP S L L H N LL +
Sbjct: 65 QPESLRSEENQQKVAALNADVMVVVAYGLILPKLVLEMPRHGCINVHGSLLPRWRGAAPI 124
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ DI + G I DTS TL +KL L ++ T+
Sbjct: 125 QRSLWAGDAETGVTIMQMDIGLDTGDMLHKLSCPIEAADTSATLYDKLADLGPAGLLTTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++ + + +S + SYA + K EA LDWSLSA+ + R I AFNP+P +Y++
Sbjct: 185 AQLADGSARPQVQDESLV--SYAEKLSKEEARLDWSLSAQQLERCIRAFNPWP--ISYFV 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+WKA L + +PG IL N GI VV V+ + ELQ KK +
Sbjct: 241 I---DEQPVKVWKASVLPAVNGHQPGEILQAN-KQGIQVVTADGVLNIEELQPAGKKAMK 296
Query: 241 ATEFIN 246
A + +N
Sbjct: 297 AQDLLN 302
>gi|283835705|ref|ZP_06355446.1| hypothetical protein CIT292_10097 [Citrobacter youngae ATCC 29220]
gi|291068384|gb|EFE06493.1| methionyl-tRNA formyltransferase [Citrobacter youngae ATCC 29220]
Length = 315
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 133/312 (42%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+ E +L+ + D+M+V+ ILP+
Sbjct: 65 QPVSLR--------PQENQQLVADLHADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KLS + D YD
Sbjct: 117 RWRGAAPIQRSLWAGDSETGVTIMQMDVGLDTGDMLHKLSCPITADDTSASLYDKLAELG 176
Query: 127 ----------MTKLFFKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ KP Q SYA + K EA +DW+LSA + R I AFNP+P
Sbjct: 177 PQGLLHTLQLLASGTAKPEVQDESLVSYAEKLSKEEARVDWTLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
YI + +KIW+A + + +PGTIL N GI V G ++ L+ LQ
Sbjct: 236 --MSYIVIDEQP--VKIWQATVIDTPANAEPGTILEAN-RQGIQVATGDGILNLISLQPA 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKAMSAQDLLN 302
>gi|217968556|ref|YP_002353790.1| methionyl-tRNA formyltransferase [Thauera sp. MZ1T]
gi|217505883|gb|ACK52894.1| methionyl-tRNA formyltransferase [Thauera sp. MZ1T]
Length = 320
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-- 58
+++ FAGT AA LD + + + + L+LT+PD +GRGMKL+ S VK+ AL H I+
Sbjct: 11 LRVAFAGTPEFAAQALDAILKAAYAVPLVLTQPDRPAGRGMKLSPSAVKQLALAHGIEVD 70
Query: 59 -----------------------------IIQPISLKL------------------NGKY 71
I+ P L L
Sbjct: 71 QPEKLRTEEQRARLVACAPDVLVVAAYGLILPPAVLALPRLGCINIHASLLPRWRGAAPI 130
Query: 72 HKI--ANETHKLLNKIEFD------IMIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
H+ A + + ++ D M++ LP +DT+ +L ++L L I++ +
Sbjct: 131 HRAIEAGDAETGITIMQMDEGLDTGPMLLRRALPIAADDTTASLHDRLAALGGACIVEAL 190
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ L PQ G +YA I + EA +DWS A I R + AF+PFPGA +
Sbjct: 191 AALAA--GALVATPQPAEGVTYAAKIGRAEADIDWSRPAAEIERAMRAFDPFPGAVSSL- 247
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +K WKA ++ E +PG +L V+ +GI+V CG++ ++ LQ+ K++
Sbjct: 248 ----RDTAVKCWKARVVAGEG--EPGRVLAVD-ADGIVVACGRDALRCTVLQRPGSKRLP 300
Query: 241 ATEFING 247
A EF+ G
Sbjct: 301 AGEFLRG 307
>gi|395009980|ref|ZP_10393403.1| methionyl-tRNA formyltransferase [Acidovorax sp. CF316]
gi|394311937|gb|EJE49217.1| methionyl-tRNA formyltransferase [Acidovorax sp. CF316]
Length = 329
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 135/315 (42%), Gaps = 74/315 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M +IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL H I ++
Sbjct: 1 MNVIFAGTPEFARVALERLLKAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALDHGIAVV 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+L+GKY + A + L D M+V ILP+
Sbjct: 61 QPRSLRLDGKYPEDAAAAREALLAARADAMVVAAYGLILPQWVLDLPRLGCLNIHASLLP 120
Query: 99 -----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
+T +T+ L +L+ + D T +++G
Sbjct: 121 RWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMLLTERTAITTSDTTATLHDRLADLG 180
Query: 140 -------------ESYAPLIKKNEAV------------LDWSLSAKTIMRKINAFNPFPG 174
AP+++ E V +DWS A+ I ++I AF+PFPG
Sbjct: 181 GRMVVEALELAACGGLAPVVQPAEGVTYAHKIEKAESAIDWSQPAQAIGQRIRAFDPFPG 240
Query: 175 AKTYYISYQNKKKFLKIWKA--HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
A T ++ +K+W A + PG +L V G+ V CG ++L LQ
Sbjct: 241 ASTRL-----GEETIKLWAGLPEAGDAPAGAVPGQVL-VADGAGVTVACGTGRLRLTTLQ 294
Query: 233 KNNKKKISATEFING 247
+ K+++A +F+ G
Sbjct: 295 RAGGKRLAAADFLRG 309
>gi|398805095|ref|ZP_10564076.1| methionyl-tRNA formyltransferase [Polaromonas sp. CF318]
gi|398092257|gb|EJL82672.1| methionyl-tRNA formyltransferase [Polaromonas sp. CF318]
Length = 328
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 135/316 (42%), Gaps = 75/316 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L+ L+ + I L+LT+PD +GRGMKL SPVK++A I +
Sbjct: 1 MRVIFAGTPEFARVALERLHAAGFEISLVLTQPDRPAGRGMKLQASPVKQWAASAHIPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+L+GK+ A + + + D+M+V ILP+
Sbjct: 61 QPRSLRLDGKFPDDAASAREAILAAKADVMVVAAYGLILPQWVLDTPRLGCLNIHASLLP 120
Query: 99 -----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMT----------- 128
+T +T+ L +L++D + D T
Sbjct: 121 RWRGAAPIHRAIEAGDAETGITIMQMDAGLDTGDMLLVDKLPIAAGDTTGSLHDRLAGLG 180
Query: 129 --------------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
L PQ G +YA I+K+EA+ DW+ A + R+I AFNPFPG
Sbjct: 181 GRLIVEALELAACGGLTATPQPAEGVTYAHKIEKHEAMTDWTQGAAVLERRIRAFNPFPG 240
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIE---STKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
A + LK W+A L+ + G +L + GI + V+++ L
Sbjct: 241 AAGVLAG-----QTLKFWRAEILADAVRPADAGAGQVLAAS-AQGIDIAAVDGVLRVSRL 294
Query: 232 QKNNKKKISATEFING 247
QK K + A +F+ G
Sbjct: 295 QKAGGKALDAADFLRG 310
>gi|253997549|ref|YP_003049613.1| methionyl-tRNA formyltransferase [Methylotenera mobilis JLW8]
gi|253984228|gb|ACT49086.1| methionyl-tRNA formyltransferase [Methylotenera mobilis JLW8]
Length = 313
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 70/309 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVK----KYAL--- 53
MKIIFAGT A L L + H++V++LT+PD +GRGMKL SP+K +Y L
Sbjct: 1 MKIIFAGTPDFAVPALAALIEAGHDVVMVLTQPDRPAGRGMKLKASPIKVLAEQYGLFVF 60
Query: 54 -KHSIK-----------------------IIQPISLKL--NGKYHKIA------------ 75
++K II + L++ +G Y+ A
Sbjct: 61 QPETLKDATVQAEIAETHADVMIVAAYGLIIPTVVLQMPKHGCYNIHASLLPRWRGAAPI 120
Query: 76 --------NETH----KLLNKIEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
NET +++ ++ M+ G++P DT+ L + L + L+++ +
Sbjct: 121 HRSILAGDNETGVTIMEVVPALDAGAMVSKGVVPITETDTTQGLHDALAAIGADLMVEAM 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ +L PQ + +YA ++K EAV+DW SA I R++ AFNPFP A+++
Sbjct: 181 H-VLTQTGRLASVPQDELLVTYAHKLEKAEAVIDWQKSAAEISRQVRAFNPFPVAQSFL- 238
Query: 181 SYQNKKKFLKIWKAHAL-SIESTKKPGTILNVNFHNGILVVCGK-NVIKLLELQKNNKKK 238
+ ++W A + + S+ PG++L+V H+GILV CG V+++ ELQ K+
Sbjct: 239 ----HGEVCRLWMATTVDGMSSSAAPGSVLDV--HDGILVACGDGGVLRISELQAPGGKR 292
Query: 239 ISATEFING 247
+SA+ F+ G
Sbjct: 293 LSASVFMLG 301
>gi|440285902|ref|YP_007338667.1| methionyl-tRNA formyltransferase [Enterobacteriaceae bacterium
strain FGI 57]
gi|440045424|gb|AGB76482.1| methionyl-tRNA formyltransferase [Enterobacteriaceae bacterium
strain FGI 57]
Length = 315
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 136/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +SEH +V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSEHQVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGVPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ ++ DIM+V+ ILP+
Sbjct: 65 QPGSLR--------PQENQQLVADLQADIMVVVAYGLILPKAVLDMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KLS + D YD
Sbjct: 117 RWRGAAPIQRSLWAGDAQTGVTIMQMDVGLDTGDMLHKLSCPITADDTSGSLYDKLADLG 176
Query: 127 -------MTKLF---FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+T+L KP Q +YA + K EA +DWSLSA + R I AFNP+P
Sbjct: 177 PQGLLHTLTQLAAGTAKPEVQDEALVTYAEKLSKEEARVDWSLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
YI + +KIW+A ++ ++ PGTIL N GI V G+ ++ LL LQ
Sbjct: 236 --MSYIVIDEQP--VKIWQASVINTPTSAVPGTILEAN-RQGIQVATGEGILNLLSLQPA 290
Query: 235 NKKKISATEFIN 246
KK + + +N
Sbjct: 291 GKKAMGVQDLLN 302
>gi|430804749|ref|ZP_19431864.1| methionyl-tRNA formyltransferase [Cupriavidus sp. HMR-1]
gi|429503069|gb|ELA01371.1| methionyl-tRNA formyltransferase [Cupriavidus sp. HMR-1]
Length = 332
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L+ ++ + +V +LT+PD +GRGM+L SPVK++A++ + +
Sbjct: 7 LRVAFAGTPEFARVALEAIHAAGFPVVAVLTQPDRPAGRGMQLQASPVKQFAIEAGLGPV 66
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP------------------- 97
+QP SL+ GKY + A L +I D+M+V ILP
Sbjct: 67 LQPRSLRRQGKYPEEAGAAVDTLAEIAPDVMVVAAYGLILPTEVLELPRHGCLNIHASLL 126
Query: 98 -----------------EDTSLTLQNKLEKLSKILII-----------------DTIKKI 123
+T +TL E L ++ DT+ +
Sbjct: 127 PRWRGAAPIHRAIEAGDPETGITLMQMDEGLDTGAMLSRESTPIGPQDSTGTLHDTLAAL 186
Query: 124 EYDM-----------TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
M L PQ G +YA I K+EA LD + A + +I AFNPF
Sbjct: 187 GGRMIVDALRQLAAGQPLTATPQPEAGVTYAEKIAKDEAPLDLTRPATELANQIRAFNPF 246
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIEST--KKPGTILNVNFHNGILVVCG-KNVIKLL 229
PGA + Q +K W+A L+ ++ PGTIL + G+++ CG + +++
Sbjct: 247 PGA-----TVQVGDTVIKCWQALPLAAATSLPHPPGTILAAD-SAGVIIACGNGSALQVT 300
Query: 230 ELQKNNKKKISATEFIN 246
ELQK ++ A +F+
Sbjct: 301 ELQKPGGRRQPAQQFLQ 317
>gi|251788003|ref|YP_003002724.1| methionyl-tRNA formyltransferase [Dickeya zeae Ech1591]
gi|247536624|gb|ACT05245.1| methionyl-tRNA formyltransferase [Dickeya zeae Ech1591]
Length = 313
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +SEH IV + T+PD +GRG KL SPVK A +H++ +
Sbjct: 3 LRIIFAGTPDFAAQHLAALLSSEHEIVGVFTQPDRPAGRGNKLTPSPVKMLAEQHNLPVF 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDT----------------- 100
QP SL+ +E+ +L+ ++ D+M+V+ ILP+
Sbjct: 63 QPKSLR--------PSESQQLVAELSADVMVVVAYGLILPQAVLDMPRLGCINVHGSLLP 114
Query: 101 ----SLTLQNKL---EKLSKILI------IDT---IKKIEY-----DMTKLFFKPQSNIG 139
+ +Q L ++L+ I I +DT + KIE D + + +N+G
Sbjct: 115 RWRGAAPIQRALWAGDRLTGITIMQMDAGLDTGAMLHKIECPILPDDTSATLYDKLANLG 174
Query: 140 E-------------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+YA + K EA LDW LSA+ + R I AFNP+P
Sbjct: 175 PQGLLHTLTQLSASQVTAVAQDDSLATYAEKLSKEEARLDWRLSAEQLERCIRAFNPWP- 233
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+Y++ +++ +K+WKA L I + PGT+L + GI V V+ + LQ +
Sbjct: 234 -VSYFMV---EEQPVKVWKAEVLDISHQQLPGTVLAAD-KEGIQVATTDGVLNIQILQPS 288
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 289 GKKAMSAQDLLN 300
>gi|357406750|ref|YP_004918674.1| methionyl-tRNA formyltransferase [Methylomicrobium alcaliphilum
20Z]
gi|351719415|emb|CCE25091.1| Methionyl-tRNA formyltransferase [Methylomicrobium alcaliphilum
20Z]
Length = 307
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 139/304 (45%), Gaps = 65/304 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT A L L +S H I + T+PD +GRG +L SPVK+ A++ I I+
Sbjct: 1 MKIVFAGTPEFAVPTLRMLIDSNHQICAVYTQPDRPAGRGRQLKPSPVKELAMQSGIPIL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL------------------------ 96
QP S K + + ++A LL + + +++ +L
Sbjct: 61 QPESFKPDHHFQQLAAFEPDLLVVVAYGMLLPQQVLDLPTFGCINVHASLLPRWRGAAPI 120
Query: 97 -------PEDTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKL--------- 130
E T +T+ KL +I DT + ++ KL
Sbjct: 121 QRALIAGDEKTGVTIMRMALKLDAGDMLHKEEYRITPKDTAGDLHDNLAKLGALGMSKVL 180
Query: 131 ------FFKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+P Q +YA ++K+EA LDW+ SA+ + KI FNP+P A+T Y
Sbjct: 181 PNIEDNTLRPEKQDESQVTYAAKLEKSEANLDWNESAEQLDLKIRGFNPWPVAQTRY--- 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
K + L+IW A LS + +PGT+L H + V G +++LLE+Q K+ISA+
Sbjct: 238 --KDQVLRIWLAEPLSGLTDAEPGTLLKNGKH--LDVATGDGLLRLLEVQLPGGKRISAS 293
Query: 243 EFIN 246
FIN
Sbjct: 294 AFIN 297
>gi|386310765|ref|YP_006006821.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418243716|ref|ZP_12870176.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433549202|ref|ZP_20505248.1| Methionyl-tRNA formyltransferase [Yersinia enterocolitica IP 10393]
gi|318607710|emb|CBY29208.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351776784|gb|EHB19070.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431790243|emb|CCO68288.1| Methionyl-tRNA formyltransferase [Yersinia enterocolitica IP 10393]
Length = 315
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 142/312 (45%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A +H I I
Sbjct: 5 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTSSPVKVLAEQHDIPIF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDT----------------- 100
QP SL+ E L+ + DIM+V+ ILP
Sbjct: 65 QPKSLR--------PEENQYLVADLNADIMVVVAYGLILPASVLAMPRLGCINVHGSLLP 116
Query: 101 ----SLTLQNKL---EKLSKILII---------DTIKKIEYDM------TKLFFK----- 133
+ +Q L + + + I+ D + KIEYD+ L+ K
Sbjct: 117 RWRGAAPIQRSLWAGDAKTGVTIMQMDVGLDTGDMLHKIEYDIQPEDTSATLYDKLAQLG 176
Query: 134 PQS------NIGE-------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
PQ + E +YA + K EA LDWSLSA + R I AFNP+P
Sbjct: 177 PQGLLVTLQQLAEGSAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+Y++ ++ +K+W+A L+ PGTI++ + H GI V V+ + +LQ
Sbjct: 236 -VSYFVV---DEQPIKVWQAQVLATVDNAAPGTIIHADKH-GIQVATADGVLNITQLQPA 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKAMSAADLLN 302
>gi|442609883|ref|ZP_21024613.1| Methionyl-tRNA formyltransferase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441748603|emb|CCQ10675.1| Methionyl-tRNA formyltransferase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 315
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 138/307 (44%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA LD L NS H+++ + ++PD +GRG KL S VK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLDALINSHHDVIAVYSQPDRPAGRGKKLKASEVKTRALEHAIPVY 64
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP + K LN H N +L +
Sbjct: 65 QPENFKSQEAKDELAALNADIMVVVAYGLLLPEAVLNIPKHGCLNVHGSILPRWRGAAPI 124
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ DI + G I DTS TL KL + ++DT+
Sbjct: 125 QRAIWAGDAETGVTIMQMDIGLDTGDMLHIATCPIEASDTSATLYEKLAQCGPTALLDTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + Q + +YA + K+EA+LDW+LSA + R I AFNP+P A T +
Sbjct: 185 ELVATGNANPI--KQDDSLANYAKKLSKDEALLDWALSAVQLERNIRAFNPWPIAHTQF- 241
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +K+W+A + +PGTIL + NGI++ + + +LQ KK +S
Sbjct: 242 ----QGNAIKVWQASV--VVGNGEPGTILQAD-KNGIVIATANQALCITQLQPEGKKPMS 294
Query: 241 ATEFING 247
A +F+NG
Sbjct: 295 AQDFLNG 301
>gi|422333632|ref|ZP_16414641.1| methionyl-tRNA formyltransferase [Escherichia coli 4_1_47FAA]
gi|373245346|gb|EHP64817.1| methionyl-tRNA formyltransferase [Escherichia coli 4_1_47FAA]
Length = 315
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 136/314 (43%), Gaps = 84/314 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF- 131
D L + L KLS + + YD KL
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYD--KLAE 174
Query: 132 FKPQSNI-------GESYAPLIK------------KNEAVLDWSLSAKTIMRKINAFNPF 172
PQ I G + P ++ K EA +DWSLSA + R I AFNP+
Sbjct: 175 LGPQGLITTLKQLAGGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P ++ + + +K+WKA + + PGTIL N GI V G ++ LL LQ
Sbjct: 235 P---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-KQGIQVATGDGILNLLSLQ 288
Query: 233 KNNKKKISATEFIN 246
KK +SA + +N
Sbjct: 289 PAGKKAMSAQDLLN 302
>gi|398792544|ref|ZP_10553138.1| methionyl-tRNA formyltransferase [Pantoea sp. YR343]
gi|398212922|gb|EJM99523.1| methionyl-tRNA formyltransferase [Pantoea sp. YR343]
Length = 314
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 137/306 (44%), Gaps = 69/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA LD L SEH +V + T+PD +GRG KL SPVK A H I +
Sbjct: 5 LKIIFAGTPDFAARHLDALLASEHQVVGVFTQPDRPAGRGNKLTPSPVKVLAQAHDIPVF 64
Query: 61 QPISLKLNGKYHKI---------------------------------------------- 74
QP SLK H +
Sbjct: 65 QPKSLKPEENQHLVADLQADIMVVVAYGLILPKAVLAMPRLGCINVHGSLLPRWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A +T + ++ D+ + G I EDTS +L KL +L ++ T+
Sbjct: 125 QRSLWAGDTETGVTIMQMDVGLDTGDMLHKLSCPITAEDTSASLYEKLAQLGPQGMLLTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ K + ++ + SYA + K EA LDWSLSA + R I AFNP+P +Y++
Sbjct: 185 DLLASGNAKPEVQDEALV--SYAEKLSKEEARLDWSLSAAQLERCIRAFNPWP--MSYFM 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+++ +K+W+A L K+PG I++ + GI + V+ L+ LQ KK +S
Sbjct: 241 I---EEQPVKVWRATVLP-HQNKQPGEIVHAD-KQGIQIATANGVLNLVSLQPAGKKAMS 295
Query: 241 ATEFIN 246
A + +N
Sbjct: 296 AQDLLN 301
>gi|167561030|ref|ZP_02353946.1| methionyl-tRNA formyltransferase [Burkholderia oklahomensis EO147]
Length = 327
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 7/154 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL +KL LI+DT+ ++E + + LF PQ G +YA I K+EA LD
Sbjct: 167 IAPDDTTATLHDKLAAAGARLIVDTLAELEREGS-LFATPQPADGVTYAEKIGKHEATLD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AF+PFPG LK+W A A++ PGTI++
Sbjct: 226 WRKPAAVLARQVRAFDPFPGGAGTL-----DGTTLKLWAAEAVAAPGDGAPGTIVDAG-P 279
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+G+++ CG+ +++ +LQK K++ A EF+ G
Sbjct: 280 DGVVIACGEGALRVTQLQKPGGKRLPAREFLAGA 313
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YAL+H I +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALEHGIAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY A LL+ D+M+V +LP++
Sbjct: 65 QPPSLRRTGKYPAEAAAALDLLHATPHDVMVVAAYGLLLPQE 106
>gi|421750134|ref|ZP_16187426.1| methionyl-tRNA formyltransferase [Cupriavidus necator HPC(L)]
gi|409770870|gb|EKN53368.1| methionyl-tRNA formyltransferase [Cupriavidus necator HPC(L)]
Length = 334
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 137/320 (42%), Gaps = 77/320 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L + + + +LT+PD +GRGM+L SPVK++AL + I
Sbjct: 7 LRVAFAGTPEFARVALAAIVEAGFPVAAVLTQPDRPAGRGMQLQASPVKQHALAQGLGPI 66
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED----------------- 99
+QP SL+ +GKY A L D+M+V ILP +
Sbjct: 67 LQPRSLRRHGKYPDEAVAAIDALAARTPDVMVVAAYGLILPAEVLTLPRHGCLNIHASLL 126
Query: 100 -------------------TSLTLQNKLEKLSKILII-----------------DTIKKI 123
T +TL E L +I DT+ +
Sbjct: 127 PRWRGAAPIHRAIEAGDAQTGITLMQMDEGLDTGAMIAREAVPIGEDTTTGALHDTLAAL 186
Query: 124 EYDM-----------TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
M L +PQ + G +YA I K+EA LD A + R+I AFNPF
Sbjct: 187 GGRMIVQALRRLAADGTLPAEPQPDDGITYAEKIGKDEARLDLRRPAVELARQIRAFNPF 246
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIE---STKKPGTILNVNFHNGILVVCGKNVIKLL 229
PGA S Q +K W+A L+ + GT+L + NG+++ CG++ +++
Sbjct: 247 PGA-----SVQIGDAAIKCWQAEPLARAPEHADAAAGTVLAADA-NGVVIACGEDALRIT 300
Query: 230 ELQKNNKKKISATEFINGCI 249
ELQK +++ A F+ G +
Sbjct: 301 ELQKAGGRRLPAQAFLQGTL 320
>gi|398800926|ref|ZP_10560186.1| methionyl-tRNA formyltransferase [Pantoea sp. GM01]
gi|398093743|gb|EJL84118.1| methionyl-tRNA formyltransferase [Pantoea sp. GM01]
Length = 314
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 136/306 (44%), Gaps = 69/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA LD L S+H +V + T+PD +GRG KL SPVK A H I +
Sbjct: 5 LKIIFAGTPDFAARHLDALLASQHQVVGVFTQPDRPAGRGNKLTPSPVKVLAQAHDIPVF 64
Query: 61 QPISLKLNGKYHKI---------------------------------------------- 74
QP SLK H +
Sbjct: 65 QPKSLKPEENQHLVADLQADIMVVVAYGLILPKTVLAMPRLGCINVHGSLLPRWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A ++ + ++ D+ + G I PEDTS +L KL +L ++ T+
Sbjct: 125 QRALWAGDSETGVTIMQMDVGLDTGDMLHKLSCPITPEDTSASLYEKLAQLGPQGMLLTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ K + ++ + SYA + K EA LDWSLSA + R I AFNP+P +Y++
Sbjct: 185 DLLASGHAKPEVQDEALV--SYAEKLSKEEARLDWSLSAVQLERCIRAFNPWP--MSYFM 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+W+A L K PG I++V+ GI + V+ L LQ KK +S
Sbjct: 241 V---DEQPVKVWQASVLP-HQNKHPGEIVHVD-KQGIQIATADGVLNLESLQPAGKKAMS 295
Query: 241 ATEFIN 246
A + +N
Sbjct: 296 AQDLLN 301
>gi|300721397|ref|YP_003710668.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297627885|emb|CBJ88431.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Xenorhabdus nematophila ATCC 19061]
Length = 315
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 147/312 (47%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L NS+H++V +LT+PD +GRG KL S VK A +H I +
Sbjct: 5 LRIIFAGTPDFAARHLAALLNSQHHVVGVLTRPDKPAGRGKKLTPSSVKVLAEEHGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QPI+L+ A E+ + + + + DIMIV+ ILP+
Sbjct: 65 QPITLR--------AEESQQWVMEQQADIMIVVAYGLILPQTVLDIPRLGCLNIHGSLLP 116
Query: 99 -----------------DTSLTLQNKLEKL-SKILIIDTIKKIE-YDMTKLFFKPQSNIG 139
+T +T+ L + +++ TI IE D + ++ +NIG
Sbjct: 117 SWRGAAPIQRSVWAGDKETGVTIMQMDAGLDTGDMLLKTICPIEKEDTSASLYEKLANIG 176
Query: 140 E-------------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+YA + K+EA +DW+L A + R I AFNP+P
Sbjct: 177 PTALLDTLDLITSGICQPEAQDNALATYAEKLSKDEAKIDWNLPAIQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ S + +KIW+A +S ++T+ PGTI+N + GI V ++ +++LQ
Sbjct: 236 --LSFFSIDEQP--IKIWQAEVISEQTTQAPGTIINAD-KKGIQVATTDGILNIIQLQPP 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKAMSAADLLN 302
>gi|345876228|ref|ZP_08828002.1| methionyl-tRNA formyltransferase [Neisseria weaveri LMG 5135]
gi|417957674|ref|ZP_12600594.1| methionyl-tRNA formyltransferase [Neisseria weaveri ATCC 51223]
gi|343966833|gb|EGV35085.1| methionyl-tRNA formyltransferase [Neisseria weaveri LMG 5135]
gi|343968007|gb|EGV36245.1| methionyl-tRNA formyltransferase [Neisseria weaveri ATCC 51223]
Length = 307
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 141/307 (45%), Gaps = 69/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AA L + + +I L+LT+PD GRGM+L SPVK+ AL+ + +
Sbjct: 1 MKVIFAGTPDFAALALKAIAAAGFDIPLVLTQPDRPKGRGMQLQASPVKQAALELGLTVA 60
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP SL+ LN H N LL +
Sbjct: 61 QPQSLRNEEAQNLLSAQNADVMVVAAYGLILPEAVLNIPAHGCLNIHASLLPRWRGAAPI 120
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ D+ + G I DT+ + + L +L I+ +
Sbjct: 121 QRAIEAGDKETGVCIMQMDVGLDTGDVVSEHRYAIKSSDTANEVHDALAQLGAQAIVADL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++++ +L PQ G +YA + K EA ++W +A+TI RKI AFNP P A ++
Sbjct: 181 QQLQT-TGRLNRTPQPENGVTYAQKLNKEEARINWQENAETIERKIRAFNPVPAA---WV 236
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
YQ K +KIW+A I+ + KPGT+L+ + +G+ V CG+ + + ELQ K++S
Sbjct: 237 EYQGKP--MKIWRAAV--IDQSGKPGTVLSCS-SDGLTVACGEKALNITELQPAGSKRMS 291
Query: 241 ATEFING 247
F G
Sbjct: 292 IEAFAAG 298
>gi|187922317|ref|YP_001893959.1| methionyl-tRNA formyltransferase [Burkholderia phytofirmans PsJN]
gi|238689475|sp|B2T1K6.1|FMT_BURPP RecName: Full=Methionyl-tRNA formyltransferase
gi|187713511|gb|ACD14735.1| methionyl-tRNA formyltransferase [Burkholderia phytofirmans PsJN]
Length = 328
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 139/315 (44%), Gaps = 74/315 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSP------------- 47
+++IFAGT AAA L ++++ + L+LT+PD +GRGMKL SP
Sbjct: 5 LRVIFAGTPEFAAAALAAIHSAGFQVPLVLTQPDRPAGRGMKLQASPVKRYAQEHGLAVA 64
Query: 48 -------VKKY------------ALKHSIKIIQPISLKLNGKYHKI-------------- 74
V KY A H + ++ L L + I
Sbjct: 65 QPPSLRRVGKYPAEAAAAIDQLRATPHDVMVVAAYGLILPQEVLDIPLLGCINIHASLLP 124
Query: 75 -------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLS 112
A + + ++ D+ + G I +DT+ TL ++L +
Sbjct: 125 RWRGAAPIHRAIEAGDAETGITLMQMDVGLDTGAMISEARTAITADDTTATLHDRLAQDG 184
Query: 113 KILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
LI++ + ++E KL PQ G +YA I K+EA LDW A + R++ AF+PF
Sbjct: 185 AKLIVEALIELER-TGKLAATPQPAEGVTYAEKIGKHEAALDWRRPAAVLARQVRAFDPF 243
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
PG ++ +K+W A A ++ PGTI +V+ G++V CG+ ++L +LQ
Sbjct: 244 PGG----VATLEDGTSIKLWAAVARDTQANGAPGTITDVS-PEGVVVACGEGALRLTQLQ 298
Query: 233 KNNKKKISATEFING 247
K K++ EF+ G
Sbjct: 299 KPGGKRLPVREFLAG 313
>gi|94312495|ref|YP_585705.1| methionyl-tRNA formyltransferase [Cupriavidus metallidurans CH34]
gi|93356347|gb|ABF10436.1| methionyl-tRNA formyltransferase [Cupriavidus metallidurans CH34]
Length = 344
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L+ ++ + +V +LT+PD +GRGM+L SPVK++A++ + +
Sbjct: 19 LRVAFAGTPEFARVALEAIHAAGFPVVAVLTQPDRPAGRGMQLQASPVKQFAVEAGLGPV 78
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP------------------- 97
+QP SL+ GKY + A L +I D+M+V ILP
Sbjct: 79 LQPRSLRRQGKYPEEAGAAVDTLAEIAPDVMVVAAYGLILPTEVLELPRHGCLNIHASLL 138
Query: 98 -----------------EDTSLTLQNKLEKLSKILII-----------------DTIKKI 123
+T +TL E L ++ DT+ +
Sbjct: 139 PRWRGAAPIHRAIEAGDPETGITLMQMDEGLDTGAMLSRESTPIGPQDSTGTLHDTLAAL 198
Query: 124 EYDM-----------TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
M L PQ G +YA I K+EA LD + A + +I AFNPF
Sbjct: 199 GGRMIVDALRQLAAGQPLTATPQPEAGVTYAEKIAKDEAPLDLTRPAIELANQIRAFNPF 258
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIEST--KKPGTILNVNFHNGILVVCG-KNVIKLL 229
PGA + Q +K W+A L+ ++ PGTIL + G+++ CG + +++
Sbjct: 259 PGA-----TVQVGDTIIKCWQALPLAAATSLPHPPGTILAADT-AGVIIACGNGSALQVT 312
Query: 230 ELQKNNKKKISATEFIN 246
ELQK ++ A +F+
Sbjct: 313 ELQKPGGRRQPAQQFLQ 329
>gi|119503585|ref|ZP_01625668.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2080]
gi|119460647|gb|EAW41739.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2080]
Length = 321
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+++FAGT AAA LD L + H++ +LT+PD +GRG ++ S VK+ A + I ++Q
Sbjct: 6 RVVFAGTPEFAAAHLDALVAAGHDVCAVLTQPDRPAGRGKQIQTSAVKRLAQTNEIPVLQ 65
Query: 62 PISLK-----------------------------LNGKYHKI------------------ 74
P SL+ LN H
Sbjct: 66 PASLRTPESHALLEALNAEIMVVVAYGLILPQSILNIPKHGCLNVHASLLPRWRGAAPIQ 125
Query: 75 ----ANETHKLLNKIEFDI------MIVMGIL---PEDTSLTLQNKLEKLSKILIIDTIK 121
A + H + ++ D M+ GIL +TS TL ++L ++ L+++ ++
Sbjct: 126 RAIEAGDAHTGITIMQMDAGLDTGAMVATGILDITASETSGTLHDRLIEVGPGLLLEVLE 185
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+ + + + PQ + YA I K EA LDW+L AK + RK+ AFNP + S
Sbjct: 186 DLPHRLAQ--ATPQEDGDAIYAAKITKQEAQLDWALDAKALSRKVRAFNP----TSVCFS 239
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
Y ++ LKIW+A AL + PG I+ + GI+V CG + + Q K +
Sbjct: 240 YLGNER-LKIWQASALPTPHNRAPGHIIE-SGPEGIVVACGIGALNITVAQFPGAKALPV 297
Query: 242 TEFING 247
+ +NG
Sbjct: 298 VDLLNG 303
>gi|152979922|ref|YP_001351834.1| methionyl-tRNA formyltransferase [Janthinobacterium sp. Marseille]
gi|166214902|sp|A6SU87.1|FMT_JANMA RecName: Full=Methionyl-tRNA formyltransferase
gi|151279999|gb|ABR88409.1| methionyl-tRNA formyltransferase [Janthinobacterium sp. Marseille]
Length = 316
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M+ M LP +DT+ +L +KL L +I+ T++++E L +PQ + G +YA I
Sbjct: 155 MLAMQRLPITADDTTASLHDKLATLGGEMIVQTLRRME--QGDLPAEPQPD-GANYAAKI 211
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
K EA LD++ A+ + RKI AFNPFPGA +K W A A+ + PG
Sbjct: 212 LKEEATLDFTQPAEQLARKIRAFNPFPGAAATC-----DGTLIKFWHAQAVPASNQLPPG 266
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYF 255
++ N H+G+LV CG +++ ELQK K++SA EF+ G K F
Sbjct: 267 QVIAANPHDGVLVACGDGALRVTELQKPGGKRLSAVEFLKGFTLEDKRF 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AA L L+ + I L+LT+PD +GRGM+L+ S VK++AL H I +
Sbjct: 1 MKIIFAGTPEFAAVALAALHAAGFEIPLVLTQPDRPAGRGMQLHASAVKQFALAHDIPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L+GKY ++A E H LL D+M+V ILP+
Sbjct: 61 QPVSLRLDGKYPEVAAEAHALLKATPHDVMVVAAYGLILPQ 101
>gi|121533702|ref|ZP_01665529.1| methionyl-tRNA formyltransferase [Thermosinus carboxydivorans Nor1]
gi|121307693|gb|EAX48608.1| methionyl-tRNA formyltransferase [Thermosinus carboxydivorans Nor1]
Length = 313
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 145/321 (45%), Gaps = 82/321 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IF GT A L+ L ++H+IV ++T+PD GRG ++ SPVK++A+ + ++
Sbjct: 4 LRVIFMGTPDFAVPTLEKLLAAKHDIVAVVTQPDRPKGRGQRMAASPVKEFAISQGLPVL 63
Query: 61 QPISLK-------------------------------------------LNGKYHKIA-- 75
QP +K L +Y A
Sbjct: 64 QPEKIKDPVFINHMLQLRPDVIVVVAFGQILPQGLLDLPPLGCINVHASLLPRYRGAAPI 123
Query: 76 ------NETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
ET + + DI + G I P++T+ L ++L+ + L++
Sbjct: 124 HWAIINGETKTGVTTMWMDIGMDTGDMILKAETPIGPDETTGELHDRLKWMGAELLV--- 180
Query: 121 KKIEYDMTKLFFK-PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ +E M + PQ N SYAPL+ ++ +DW SA + + NP+PGA T +
Sbjct: 181 RSLELLMAGNAPRIPQDNSAASYAPLLTRDIEQVDWRRSALEVHNLVRGLNPWPGAYTTH 240
Query: 180 ISYQNKKKFLKIWK-----AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
K LKIW+ HA S+ PGT+++V H+G++V G+ +I+L E+Q
Sbjct: 241 -----SGKTLKIWRTRIIDGHAGSV----PPGTVVDVR-HHGVVVATGRGLIQLTEVQPE 290
Query: 235 NKKKISATEFING---CIKNI 252
+KK++ A E+ G C +I
Sbjct: 291 SKKRMQACEYARGYNLCAGDI 311
>gi|413963942|ref|ZP_11403169.1| methionyl-tRNA formyltransferase [Burkholderia sp. SJ98]
gi|413929774|gb|EKS69062.1| methionyl-tRNA formyltransferase [Burkholderia sp. SJ98]
Length = 322
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
IL +DT+ TL ++L ++ LI+ ++ +E D L PQ + G +YA I KNEA LD
Sbjct: 167 ILADDTTATLHDRLAQMGAELIVAALRDLERD-GALLSTPQPDEGTTYAEKIAKNEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A+ + R+I AF+PFPGA S +KIW A ++ +PG I +V+
Sbjct: 226 WRRPAEELARQIRAFDPFPGAFGTLDSAP-----IKIWAAQ--PVDGAGEPGAIADVS-P 277
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+GI+V+CG +KL +LQK K++ A EF+ G
Sbjct: 278 DGIVVMCGSGALKLTQLQKPGGKRLPAREFLAGA 311
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT AAA L ++ + ++ L+LT+PD +GRGMKL S VK++A++H +K+
Sbjct: 5 LRVVFAGTPEFAAAALAAIHAAGFSVPLVLTQPDRPAGRGMKLTASAVKRFAVEHGLKVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY + A E L D+M+V ILP++
Sbjct: 65 QPTSLRRAGKYPQEAAEAIDSLKATPHDVMVVAAYGLILPQE 106
>gi|319639523|ref|ZP_07994270.1| methionyl-tRNA formyltransferase [Neisseria mucosa C102]
gi|317399094|gb|EFV79768.1| methionyl-tRNA formyltransferase [Neisseria mucosa C102]
Length = 308
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ + +
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLTVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ +T H LN
Sbjct: 61 QPEKLRNNAEALQMLKDTGADVMVVAAYGLILPQEVLDAPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIESGDAETGVCIMQMDIGLDTGAVVSERRYAIQPTDTANEVHDALMGLGAEAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA +DW+ SA I RKI AFNP P A +
Sbjct: 181 LQRLQAE-GRLNAVKQPEEGVTYAQKLSKEEARIDWNQSADIIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A ++ + K G +L+ +G+LV CGKN + + ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEVVAKQG--KAGEVLSCT-SDGLLVACGKNALNITELQPSGSKRM 291
Query: 240 SATEFING 247
S F G
Sbjct: 292 SIQAFAAG 299
>gi|410859673|ref|YP_006974907.1| methionyl-tRNA formyltransferase [Alteromonas macleodii AltDE1]
gi|410816935|gb|AFV83552.1| methionyl-tRNA formyltransferase [Alteromonas macleodii AltDE1]
Length = 316
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 87/324 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L +SEH ++ + T+PD +GRG KL SPVK A +++I +
Sbjct: 5 LKVIFAGTPDFAAKHLSALLDSEHEVIAVYTQPDRPAGRGKKLTASPVKVLAEENAIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP SLK A + K L + D+M+V+ ILP
Sbjct: 65 QPQSLK--------AEDAQKELAALNADLMVVVAYGLLLPTAVLNAPRLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
+ +T +T+ E L +L I T+ D + ++ + +G
Sbjct: 117 KWRGAAPIQRSIWAGDAETGVTIMQMDEGLDTGDMLHIATLPIANDDTSATMYEKLATLG 176
Query: 140 -----------ESYAPL------------IKKNEAVLDWSLSAKTIMRKINAFNPFPGAK 176
ESY P + K EA+++WS AK I R I AFNP+P A
Sbjct: 177 PKALVDVVNDFESYTPTKQDDTQVTYAKKLSKEEALINWSDDAKQIERNIRAFNPWPVA- 235
Query: 177 TYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Q + + +K+W A ++++ KPGT+++ + GI + G++ +++ LQ K
Sbjct: 236 ----WMQVEDQNVKVWSADVVTLDKDVKPGTVISAD-KAGITIATGRDALRITSLQIPGK 290
Query: 237 KKISATEFING---------CIKN 251
K + A + IN CIK
Sbjct: 291 KALPAADVINARQSWFEVGRCIKQ 314
>gi|389839362|ref|YP_006341446.1| methionyl-tRNA formyltransferase [Cronobacter sakazakii ES15]
gi|387849838|gb|AFJ97935.1| methionyl-tRNA formyltransferase [Cronobacter sakazakii ES15]
Length = 315
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 133/312 (42%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL PVK A ++ I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSSHQVVGVFTQPDRPAGRGKKLMPGPVKVLAQENDIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ + E+ +L+ + D+M+V+ ILPE
Sbjct: 65 QPKSLR--------SAESQELVASLNADVMVVVAYGLILPEAVLAMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
DT L + L KLS + + YD
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMQMDTGLDTGDMLRKLSCPITDEDTSASLYDKLAQLG 176
Query: 127 ------------MTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
++ + Q + +YA + K EA LDW+LSA + R I AFNP+P
Sbjct: 177 PQGLLATLEDLAAGRVVPEKQHDAQATYADKLSKEEARLDWTLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ I Q +K+WKA + +S PGTIL+ GI V ++ L LQ
Sbjct: 236 VSFFMIDEQP----VKVWKASVIHQQSHATPGTILDAG-KQGIQVATTDGILNLESLQPA 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKPMSAQDLLN 302
>gi|372487499|ref|YP_005027064.1| methionyl-tRNA formyltransferase [Dechlorosoma suillum PS]
gi|359354052|gb|AEV25223.1| methionyl-tRNA formyltransferase [Dechlorosoma suillum PS]
Length = 308
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 128/307 (41%), Gaps = 73/307 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
MKI+FAGT AA L LY + H+I L+LT+PD +GRGM L F
Sbjct: 1 MKIVFAGTPEFAARALAALYEAGHDIPLVLTQPDRPAGRGMTLQASPVKQLALSRGSEVF 60
Query: 46 SPV--KKYALKHSIKIIQP----------------ISLKLNG---------KYHKIANET 78
P+ K A + ++++ P + + +G + A
Sbjct: 61 QPLTLKDEAAQEKLRLLAPDVMVVAAYGLILPQAVLDIPRHGCLNIHASLLPRWRGAAPI 120
Query: 79 HK--LLNKIEFDIMIVM----------------GILPEDTSLTLQNKLEKLSKILIIDTI 120
H+ L E + I+ I +DTS TL +KL LI+ +
Sbjct: 121 HRAILAGDAESGVCIMQMEAGLDTGPVLLSASTAITAQDTSQTLHDKLAVQGAQLIVSAL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ Q G +YA + K+EA LDW A + R+I AF PFPG
Sbjct: 181 QRLPLPAVA-----QPEAGVTYAAKLDKSEAPLDWRRPAAELDRQIRAFTPFPGTTAVL- 234
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
LK+W AL + PGT+L + H GILV CG + L ELQK K++
Sbjct: 235 ----DGAPLKVWA--ALPRSESGVPGTVLAADKH-GILVACGSGSLLLTELQKAGGKRLP 287
Query: 241 ATEFING 247
+F+ G
Sbjct: 288 VAQFLAG 294
>gi|167568292|ref|ZP_02361166.1| methionyl-tRNA formyltransferase [Burkholderia oklahomensis C6786]
Length = 327
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL +KL LI+DT+ ++E + + L PQ G +YA I K+EA LD
Sbjct: 167 IAPDDTTATLHDKLAAAGARLIVDTLAELEREGS-LVATPQPADGVTYAEKIGKHEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AF+PFPG LK+W A A++ PGTI++
Sbjct: 226 WHKPAAVLARQVRAFDPFPGGAGTL-----DGTTLKLWAAEAVAAPGDGAPGTIVDAG-P 279
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+G+++ CG+ +++ +LQK K++ A EF+ G
Sbjct: 280 DGVVIACGEGALRVTQLQKPGGKRLPAREFLAGA 313
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YAL+H I +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALEHGIAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY A LL+ D+M+V +LP++
Sbjct: 65 QPPSLRRTGKYPAEAAAALDLLHATPHDVMVVAAYGLLLPQE 106
>gi|156932267|ref|YP_001436183.1| hypothetical protein ESA_00038 [Cronobacter sakazakii ATCC BAA-894]
gi|166214894|sp|A7MPE8.1|FMT_ENTS8 RecName: Full=Methionyl-tRNA formyltransferase
gi|156530521|gb|ABU75347.1| hypothetical protein ESA_00038 [Cronobacter sakazakii ATCC BAA-894]
Length = 315
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 130/312 (41%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL PVK A ++ I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSSHQVVGVFTQPDRPAGRGKKLMPGPVKVLAQENDIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ + E +L+ + D+M+V+ ILPE
Sbjct: 65 QPKSLR--------SAENQELVAALNADVMVVVAYGLILPEAVLSMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KLS + D YD
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMQMDKGLDTGDMLRKLSCPITADDTSASLYDKLAQLG 176
Query: 127 ------------MTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ + Q + +YA + K EA LDW+LSA + R I AFNP+P
Sbjct: 177 PQGLLATLEDLAAGRAVPEKQDDAQATYADKLSKEEARLDWTLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ I Q +K+WKA + +S PGTIL+ GI V ++ L LQ
Sbjct: 236 VSFFMIDEQP----VKVWKASVIRQQSHATPGTILDAG-KQGIQVATTDGILNLESLQPA 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKPMSAQDLLN 302
>gi|261380546|ref|ZP_05985119.1| methionyl-tRNA formyltransferase [Neisseria subflava NJ9703]
gi|284796514|gb|EFC51861.1| methionyl-tRNA formyltransferase [Neisseria subflava NJ9703]
Length = 308
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ + +
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLTVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ +T H LN
Sbjct: 61 QPEKLRNNAEALQMLKDTGADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMGLGAEAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA +DW+ SA I RKI AFNP P A +
Sbjct: 181 LQRLQAE-GRLNAVKQPEEGVTYAQKLSKEEARIDWNESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A ++ + K G +L+ +G+LV CG+N + + ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEVVAKQG--KAGEVLSCT-SDGLLVACGENALNITELQPSGSKRM 291
Query: 240 SATEFING 247
S F G
Sbjct: 292 SIQAFAAG 299
>gi|255067831|ref|ZP_05319686.1| methionyl-tRNA formyltransferase [Neisseria sicca ATCC 29256]
gi|255047922|gb|EET43386.1| methionyl-tRNA formyltransferase [Neisseria sicca ATCC 29256]
Length = 308
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 144/309 (46%), Gaps = 72/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLAPSPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPRHGCLNIHTSLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMNLGAEAIVAD 180
Query: 120 IKKIEY-DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+++++ D K +P+ + +YA + K EA ++WS SA I RKI AFNP P A
Sbjct: 181 LQQLKTEDRLKSVKQPEEGV--TYAQKLSKEEARINWSESAAVIERKIRAFNPVPAA--- 235
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
++ YQ K +KIW+A A++ + K G +L+ + +G++V CG+N +K+ ELQ + K+
Sbjct: 236 WVEYQGKP--MKIWRAEAVAQQG--KAGEVLSCSA-DGLVVACGENALKITELQPSGSKR 290
Query: 239 ISATEFING 247
+ F G
Sbjct: 291 MPIAAFAAG 299
>gi|120552985|ref|YP_957336.1| methionyl-tRNA formyltransferase [Marinobacter aquaeolei VT8]
gi|259646041|sp|A1TWN0.1|FMT_MARAV RecName: Full=Methionyl-tRNA formyltransferase
gi|120322834|gb|ABM17149.1| methionyl-tRNA formyltransferase [Marinobacter aquaeolei VT8]
Length = 311
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 136/308 (44%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT AA L TL N+ ++IV + T+PD +GRG KL SPVK+ AL I +
Sbjct: 1 MRIVFAGTPDFAATALKTLLNAGYDIVGVYTQPDRPAGRGRKLMPSPVKQVALDTGIPVY 60
Query: 61 QPISLKLNGKYHKIAN----------------------ETHKLLN--------------- 83
QP+SLK ++A+ TH LN
Sbjct: 61 QPVSLKPEEAQQELASLQPDVMIVAAYGLILPKAVLNIPTHGCLNIHASLLPRWRGAAPI 120
Query: 84 -------KIEFDIMIVM----------------GILPEDTSLTLQNKLEKLSKILIIDTI 120
E I I+ I +DT +L ++L ++ I+ +
Sbjct: 121 QRAIAAGDAETGITIMQMDEGLDTGDMLLKLDTPISADDTGGSLHDRLAEMGGKAIVQAM 180
Query: 121 KKI-EYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++ + D+T Q+ +YA + K E +DWS SA+ I R I AFNP+PG T
Sbjct: 181 ERLAKGDLTGEV---QNEAEANYAHKLSKEEGHIDWSRSAQEIERLIRAFNPWPGTFTDL 237
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
++ ++I +A AL S K PGT++ +G+ V CG +++ Q K
Sbjct: 238 -----GEQRIRIHQASALKQGSDKGPGTVI-ARERDGVDVACGTGTLRITSAQLPGSKAQ 291
Query: 240 SATEFING 247
S + ING
Sbjct: 292 SINDLING 299
>gi|421470700|ref|ZP_15919061.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
BAA-247]
gi|400227113|gb|EJO57128.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
BAA-247]
Length = 327
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 132/316 (41%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++++ + L+LT+PD +GR G+ +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHDAGFAVPLVLTQPDRPAGRGMKLQASAVKRYALEHGLPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + ++ I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAVEAIEL-LRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMIQASRIAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GAQLIVDALARLERDGT-LAATPQPADGATYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +KIW A + PGTI+ +G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKIWAAEPATGRGDAAPGTIVEAA-PDGVIVACGTGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|381395653|ref|ZP_09921348.1| methionyl-tRNA formyltransferase [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379328532|dbj|GAB56481.1| methionyl-tRNA formyltransferase [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 321
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 140/311 (45%), Gaps = 74/311 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AA+ L L +++H+I+ + T+PD +GRG K+ S VK AL H++ +
Sbjct: 1 MRIIFAGTPDFAASHLQALLDAKHSIIAVYTQPDRPAGRGKKVASSAVKTLALAHNLPVF 60
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP SLK LN H N +L K
Sbjct: 61 QPASLKTQEAHEALRALNADLMVVVAYGLILPAEILNAPVHGCINVHGSILPKWRGAAPI 120
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ D + G I EDTS TL +KL L +++++
Sbjct: 121 QRALWAGDKETGVTIMQMDEGLDTGNVLSIHTIDIANEDTSATLYDKLASLGPKALVESL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
K T+L Q + SYA + K EA LDW + A+ + R I AFNP+P A
Sbjct: 181 AK----FTQLSAIKQDDTRASYAAKLSKAEAYLDWQVPAQQLERNIRAFNPWPVAW---- 232
Query: 181 SYQNKKKFLKIWKAHALSIES----TKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
+ + K +K+++AH +E + PG +++ + H G+ + GK+VI + +LQ K
Sbjct: 233 -FTHHGKSIKVFQAHVREVEDAIHLSFTPGKVISFDRH-GLQIATGKDVIVITKLQLAGK 290
Query: 237 KKISATEFING 247
K + +NG
Sbjct: 291 KAQELADIVNG 301
>gi|119471680|ref|ZP_01614065.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Alteromonadales bacterium TW-7]
gi|359450338|ref|ZP_09239792.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. BSi20480]
gi|119445459|gb|EAW26746.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Alteromonadales bacterium TW-7]
gi|358043887|dbj|GAA76041.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. BSi20480]
Length = 317
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 86/315 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L NSEH IV + ++PD +GRG KL S VK AL++ + +
Sbjct: 5 LRIIFAGTPDFAARHLQALINSEHEIVGVYSQPDRPAGRGKKLKASEVKALALENDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP SLK +E L + DIMIV+ ILP
Sbjct: 65 QPQSLK--------NDEALAELTALNADIMIVVAYGLILPKAILNAPRLGCLNVHGSILP 116
Query: 98 ----------------EDTSLTLQNKLEKL--------SKILIID--------------- 118
E+T +T+ E L S+ I D
Sbjct: 117 RWRGAAPIQRAIWAGDEETGVTIMQMDEGLDTGDMLHISRCPISDTETSASLYNKLAELG 176
Query: 119 ------TIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
T+ K+ D + +PQ++ +YA + K EA +DWS+SA I R I +FNP+
Sbjct: 177 PSALIDTVNKLAND--DITPEPQNDELANYAKKLSKEEANIDWSMSAVQIERNIRSFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P T Q ++ +KI++A ++ + KPG IL + NG++V CG++ + + +LQ
Sbjct: 235 PVCFT-----QMGEQTVKIYQAKV--VDQSGKPGEILTSD-KNGVVVACGEHALSITQLQ 286
Query: 233 KNNKKKISATEFING 247
KK ++ ++F+NG
Sbjct: 287 PQGKKPMAISDFLNG 301
>gi|254251082|ref|ZP_04944400.1| Methionyl-tRNA formyltransferase [Burkholderia dolosa AUO158]
gi|124893691|gb|EAY67571.1| Methionyl-tRNA formyltransferase [Burkholderia dolosa AUO158]
Length = 273
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL ++L LI+D + ++E D T L PQ G +YA I K+EA LD
Sbjct: 113 IAPDDTTSTLHDRLAAEGARLIVDALARLERDGT-LPATPQPADGATYAEKIGKHEAALD 171
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AF+PFPG +K+W A LS PGTI++
Sbjct: 172 WRKPADVLARQVRAFDPFPGGVATL-----DGAAIKLWAAEPLSARVEAAPGTIVDAA-P 225
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG +++ +LQK K++ A EF+ G
Sbjct: 226 DGVIVACGSGALRVTQLQKPGGKRLPAREFLAG 258
>gi|387812478|ref|YP_005427955.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381337485|emb|CCG93532.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 311
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 138/307 (44%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT AA L TL N+ ++IV + T+PD +GRG KL SPVK+ AL I +
Sbjct: 1 MRIVFAGTPDFAATALKTLLNAGYDIVGVYTQPDRPAGRGRKLMPSPVKQVALDTGIPVY 60
Query: 61 QPISLKLNGKYHKIAN----------------------ETHKLLN--------------- 83
QP+SLK ++A+ TH LN
Sbjct: 61 QPVSLKPEEAQQELASLQPDVMIVAAYGLILPKAVLNIPTHGCLNIHASLLPRWRGAAPI 120
Query: 84 -------KIEFDIMIVM--------GIL--------PEDTSLTLQNKLEKLSKILIIDTI 120
E I I+ G+L +DT +L ++L ++ I+ +
Sbjct: 121 QRAIAAGDAETGITIMQMDEGLDTGGMLLKLDTPISADDTGGSLHDRLAEMGGKAIVQAL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ + L + Q+ +YA + K E +DW +A+ I R I AFNP+PG T
Sbjct: 181 ERLANN--DLTGEVQNEAEANYAHKLSKEEGHIDWRQNAQEIERLIRAFNPWPGTFTDL- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ ++I +A AL +S K PGT++ +G+ V CG +++ +Q K S
Sbjct: 238 ----GEQRIRIHQAGALKQDSDKGPGTVI-ARERDGVDVACGTGTLRITSVQLPGSKAQS 292
Query: 241 ATEFING 247
+ ING
Sbjct: 293 INDLING 299
>gi|261364699|ref|ZP_05977582.1| methionyl-tRNA formyltransferase [Neisseria mucosa ATCC 25996]
gi|288566989|gb|EFC88549.1| methionyl-tRNA formyltransferase [Neisseria mucosa ATCC 25996]
Length = 308
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 142/308 (46%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAASFEIPLVLTQPDRPKGRGMQLAPSPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMSLGAAAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA +DW+ SA I RKI AFNP P A +
Sbjct: 181 LQQLKTE-GRLKSVKQPEEGVTYAQKLSKEEARIDWNESATVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A ++ + + G +L+ + +G++V CG+N +K+ ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEVVAQQG--RAGEVLSCSA-DGLVVACGENALKITELQPSGSKRM 291
Query: 240 SATEFING 247
F G
Sbjct: 292 PIAAFAAG 299
>gi|332139429|ref|YP_004425167.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549451|gb|AEA96169.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 316
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 71/316 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L SEH ++ + T+PD +GRG KL SPVK A +++I +
Sbjct: 5 LKVIFAGTPDFAAKHLSALLESEHEVIAVYTQPDRPAGRGKKLTASPVKVLAEENAIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMI--------------VMG-ILPE------- 98
QP SLK ++A+ L+ + + +++ V G ILP+
Sbjct: 65 QPQSLKAQDAQEELASLNADLMVVVAYGLILPTAVLNAPKLGCINVHGSILPKWRGAAPI 124
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG-------- 139
+T +T+ E L +L I T+ D + ++ + +G
Sbjct: 125 QRSIWAGDAETGVTIMQMDEGLDTGDMLHIATLPIANDDTSATMYEKLATLGPKALVDVV 184
Query: 140 ---ESYAPL------------IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
ESY P + K EA++ WS AK I R I AFNP+P A Q
Sbjct: 185 NDFESYTPTKQDDTQATYANKLSKEEALISWSDDAKQIERNIRAFNPWPVA-----WMQV 239
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+ + +K+W A ++++ KPGT+++ + GI + G++ +++ LQ KK + A +
Sbjct: 240 EDQNVKVWSADVVTLDKNVKPGTVISAD-KAGITIATGRDALRITSLQIPGKKALPAADV 298
Query: 245 ING---------CIKN 251
IN CIK
Sbjct: 299 INARQSWFEVGRCIKQ 314
>gi|90413778|ref|ZP_01221766.1| methionyl-tRNA formyltransferase [Photobacterium profundum 3TCK]
gi|90325247|gb|EAS41744.1| methionyl-tRNA formyltransferase [Photobacterium profundum 3TCK]
Length = 314
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 137/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +S+H ++ + T+PD +GRG KL SPVK AL++ + +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSQHEVIAVYTQPDRPAGRGKKLTASPVKNIALENDLPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP SL+ + + L+ + DIMIV+ ILP
Sbjct: 65 QPASLR--------NEDAQQELSALNADIMIVVAYGLLLPKIVLDTPKLGCINVHGSILP 116
Query: 98 ----------------EDTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
E+T +T+ E L +L I T+ D + + + +G
Sbjct: 117 RWRGAAPIQRSIWAGDEETGVTIMQMDEGLDTGDMLTIATLAIEPTDTSATMYDKLAGLG 176
Query: 140 -------------------------ESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+YA + K EA +DW++ A I R I AFNP+P
Sbjct: 177 PNALIDCLSEISAGTAIAKKQNDELANYAKKLNKEEAKIDWAMEATAIERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ QN +K+W A + K PGTIL+ + GI V GK ++L+ELQ
Sbjct: 236 MSYFAVAEQN----VKVWHAVVEADNQGKTPGTILSAD-KQGITVATGKGALRLIELQPP 290
Query: 235 NKKKISATEFIN 246
KK + A + +N
Sbjct: 291 GKKAMKAQDILN 302
>gi|241760443|ref|ZP_04758537.1| methionyl-tRNA formyltransferase [Neisseria flavescens SK114]
gi|241319112|gb|EER55605.1| methionyl-tRNA formyltransferase [Neisseria flavescens SK114]
Length = 308
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ S+ +
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELSLTVA 60
Query: 61 QPISLK------------------------------LNGKYHKIANETHKLLNK------ 84
QP L+ L+ H N LL +
Sbjct: 61 QPEKLRNNAEALQMLKDMGADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMGLGAEAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + K Q G +YA + K EA +DW+ SA I RKI AFNP P A +
Sbjct: 181 LQRLQAEGCLNAVK-QPEEGVTYAQKLSKEEARIDWNESADIIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ+K +KIW+A ++ + K G +L+ +G+LV CG+N + + ELQ + K++
Sbjct: 237 VEYQDKP--MKIWRAEVVAKQG--KAGEVLSCT-SDGLLVACGENALNITELQPSGSKRM 291
Query: 240 SATEFING 247
S F G
Sbjct: 292 SIQAFAAG 299
>gi|167908988|ref|ZP_02496079.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 112]
gi|254295707|ref|ZP_04963164.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 406e]
gi|157806120|gb|EDO83290.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 406e]
Length = 327
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRG----------------MKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GRG M +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALERGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ ++ + + L L+ H +
Sbjct: 65 QPPSLRRAGKYPVEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 243 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|291518518|emb|CBK73739.1| methionyl-tRNA formyltransferase [Butyrivibrio fibrisolvens 16/4]
Length = 311
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 73/318 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT A L +Y + H ++L++++PD GR KL +PVK++A++H I +
Sbjct: 1 MKVVFMGTPDFAVETLKAIYEAGHEVILVVSQPDKPKGRSGKLAPTPVKEFAVEHDIPVY 60
Query: 61 QPISLK-------------------------------------------LNGKYHKIANE 77
QP+ ++ L KY A
Sbjct: 61 QPVKIRAEESVEYLRKYEADVFVVAAFGQILPKVILDMPRIGCVNVHGSLLPKYRGAAPI 120
Query: 78 THKLLN--KIEFDIMIVMG--------------ILPED-TSLTLQNKLEKLSKILIIDTI 120
++N K+ + ++MG +L ED T +L +KL L + TI
Sbjct: 121 QWAVINGEKVSGNTTMLMGPGLDDGDMLLKSEVVLSEDETGGSLFDKLAIDGGKLAVKTI 180
Query: 121 KKIEY-DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ +E ++T + PQ ++ +IKK ++DW+ A I R I NP+P A T+
Sbjct: 181 EALERGEITPI---PQDESQATHVGMIKKEMGLVDWTKPAAEIERLIRGLNPWPSAFTFI 237
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
Q LK+WK +E + +PGTI++V+ NG V CGK + + ELQ KK++
Sbjct: 238 DGKQ-----LKLWKGTV--VEKSGEPGTIIDVD-KNGFTVACGKGSLVINELQLEGKKRM 289
Query: 240 SATEFING-CIKNIKYFI 256
+A +F+ G I+ K F+
Sbjct: 290 AAGDFLRGYSIETGKRFV 307
>gi|317494308|ref|ZP_07952722.1| methionyl-tRNA formyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917558|gb|EFV38903.1| methionyl-tRNA formyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 315
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 145/324 (44%), Gaps = 87/324 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S+H IV + T+PD +GRG KL SPVK A +H++ +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHNLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+ + KL++ + D+M+V+ ILP+
Sbjct: 65 QPVSLR--------PEDNQKLVSDLNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF- 131
D L + L K+S + YD KL
Sbjct: 117 RWRGAAPIQRALWAGDAETGVTIMQMDVGLDTGDMLHKVSCPITAQDTSATLYD--KLAE 174
Query: 132 FKPQ------SNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPF 172
PQ + + A K++EA+ L+W+LSA + R + AFNP+
Sbjct: 175 MGPQGLLATLAELANGTATPEKQDEALVTYAEKLSKEEARLNWTLSAAQLERCVRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P + I Q +K+W++ A++ E + PGTI++ + H GI V + + + +LQ
Sbjct: 235 P-VSFFMIDGQP----VKVWQSQAIAAEQNQAPGTIISADKH-GIAVATAEGALLMTQLQ 288
Query: 233 KNNKKKISATEFINGCIKNIKYFI 256
+ KK +SA + +N ++FI
Sbjct: 289 PSGKKSMSAQDLLN---SRREWFI 309
>gi|221201859|ref|ZP_03574896.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD2M]
gi|221207635|ref|ZP_03580643.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD2]
gi|221172481|gb|EEE04920.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD2]
gi|221178279|gb|EEE10689.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD2M]
Length = 327
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 132/316 (41%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++++ + L+LT+PD +GR G+ +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHDAGFAVPLVLTQPDRPAGRGMKLQASAVKRYALEHGLPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + ++ I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAVEAIEL-LRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMIQASRSAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GAQLIVDALARLERDGT-LAATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +KIW A + PGTI+ +G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKIWAAEPATGRGDAAPGTIVEAA-PDGVIVACGTGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|167834979|ref|ZP_02461862.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis
MSMB43]
gi|424901712|ref|ZP_18325228.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis
MSMB43]
gi|390932087|gb|EIP89487.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis
MSMB43]
Length = 327
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL +KL LI+D + ++E L PQ G +YA I K+EA LD
Sbjct: 167 IAPDDTTATLHDKLAAAGARLIVDALAELER-AGSLAATPQPADGVTYAEKIGKHEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A+ + R++ AF+PFPG LK+W A A+ PGTI++
Sbjct: 226 WRKPAEVLARQVRAFDPFPGGAGTL-----DGATLKLWAADAVPARGDAAPGTIVDAG-P 279
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+GI++ CG+ +++ +LQK K++ A EF+ G
Sbjct: 280 DGIVIACGEGALRVTQLQKPGGKRLPAREFLAGA 313
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YAL+H I +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALEHGIALA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY A LL+ D+M+V +LP++
Sbjct: 65 QPPSLRRAGKYPAEAAAALDLLHATPHDVMVVAAYGLLLPQE 106
>gi|126454119|ref|YP_001064444.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1106a]
gi|167843769|ref|ZP_02469277.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei B7210]
gi|242314315|ref|ZP_04813331.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1106b]
gi|403516815|ref|YP_006650948.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei BPC006]
gi|166214881|sp|A3NQ23.1|FMT_BURP0 RecName: Full=Methionyl-tRNA formyltransferase
gi|126227761|gb|ABN91301.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1106a]
gi|242137554|gb|EES23956.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1106b]
gi|403072459|gb|AFR14039.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei BPC006]
Length = 327
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRG----------------MKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GRG M +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALERGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ ++ + + L L+ H +
Sbjct: 65 QPPSLRRAGKYPVEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
L++D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLVVDALVELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 243 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|33152993|ref|NP_874346.1| methionyl-tRNA formyltransferase [Haemophilus ducreyi 35000HP]
gi|39931234|sp|Q7VK98.1|FMT_HAEDU RecName: Full=Methionyl-tRNA formyltransferase
gi|33149218|gb|AAP96735.1| methionyl-tRNA formyltransferase [Haemophilus ducreyi 35000HP]
Length = 316
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 137/313 (43%), Gaps = 77/313 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L S+HNIV + T+PD +GRG KL SPVK+ AL+H+I +
Sbjct: 4 LNIIFAGTPEFAAQHLQALLASQHNIVAVYTQPDKPAGRGKKLQASPVKQLALQHNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ + LN + D+M+V+ ILPE
Sbjct: 64 QPKSLR--------NPQAQAELNALNGDVMVVVAYGLILPEAVLHIPRYGCLNVHGSLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEY------- 125
D L + L K+S + D Y
Sbjct: 116 RWRGAAPIQRAIWAGDQETGVTIMQMDAGLDTGDMLHKVSTKIEADETSASLYMKLAKLA 175
Query: 126 ---------DMTKLFFKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+T+ FKP Q N +YA + K EA LDW+L A + + I AFNP+P
Sbjct: 176 PPALLAVLDGLTEQQFKPEKQDNQLANYAEKLSKQEAKLDWNLPAYQLAQNIRAFNPWP- 234
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ + ++ +K+++A L+ GT+L V+ NGI + + V+ + +LQ
Sbjct: 235 MSFLTVEVEGVEQHVKVYQATVLA-HQYHAVGTVLQVD-KNGIQIATSEGVLNITQLQPQ 292
Query: 235 NKKKISATEFING 247
KK +S +F+NG
Sbjct: 293 GKKPMSVQDFLNG 305
>gi|113869634|ref|YP_728123.1| methionyl-tRNA formyltransferase [Ralstonia eutropha H16]
gi|113528410|emb|CAJ94755.1| Methionyl-tRNA formyltransferase [Ralstonia eutropha H16]
Length = 337
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 137/317 (43%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L+ ++ + IV +LT+PD +GRG++L+ SPVK++A + +
Sbjct: 7 LRVAFAGTPEFARVALEAIHAAGFPIVAVLTQPDRPAGRGLQLHASPVKQFAAASGLGPV 66
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP------------------- 97
+QP SL+ GKY + A L D+M+V ILP
Sbjct: 67 LQPRSLRRQGKYPEDAAAAIDALAGTAPDVMVVAAYGLILPAEVLALPRLGCLNIHGSLL 126
Query: 98 -----------------EDTSLTLQNKLEKLSKILII-----------------DTIKKI 123
+T +TL E L ++ DT+ +
Sbjct: 127 PRWRGAAPIHRAIEAGDAETGITLMQMDEGLDTGDMLTRAAVPIGPDDTTGTLHDTLAAL 186
Query: 124 EYDMT-----------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
MT L PQ G +YA I K+EA LD A + ++ AFNPF
Sbjct: 187 GARMTVAALQELAAGRALPATPQPAEGVTYAEKIAKDEAPLDLRRPAAALANQVRAFNPF 246
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIEST--KKPGTILNVNFHNGILVVCGK-NVIKLL 229
PGA + Q +K W+A L+ S+ PGT+L + G+L+ CG+ + +++
Sbjct: 247 PGA-----TVQVGDTVIKCWQAVPLAAASSLPHPPGTVLAADA-AGVLIACGEGSALQVT 300
Query: 230 ELQKNNKKKISATEFIN 246
ELQK ++ A +F+
Sbjct: 301 ELQKPGGRRQPAQQFLQ 317
>gi|429121507|ref|ZP_19182128.1| Methionyl-tRNA formyltransferase [Cronobacter sakazakii 680]
gi|426323980|emb|CCK12865.1| Methionyl-tRNA formyltransferase [Cronobacter sakazakii 680]
Length = 315
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 132/312 (42%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL P+K A +++I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSSHQVVGVFTQPDRPAGRGKKLMPGPIKVLAQENNIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ + D+M+V+ ILPE
Sbjct: 65 QPKSLR--------PAENQELVASLNADVMVVVAYGLILPEAVLAMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
DT L + L KLS + + YD
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMQMDTGLDTGDMLRKLSCPITDEDTSASLYDKLAQLG 176
Query: 127 ------------MTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
++ + Q + +YA + K EA LDW+LSA + R I AFNP+P
Sbjct: 177 PQGLLATLEDLAAGRVVPEKQHDAQATYADKLSKEEARLDWTLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ I Q +K+WKA + +S PGTIL+ GI V ++ L LQ
Sbjct: 236 VSFFMIDEQP----VKVWKASVIHQQSHATPGTILDAG-KQGIQVATTDGILNLESLQPA 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKPMSAQDLLN 302
>gi|392310461|ref|ZP_10272995.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas citrea NCIMB
1889]
Length = 314
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 66/305 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L NS+H++V + + PD +GRG KL S VK AL+H + +
Sbjct: 5 LRIVFAGTPDFAARHLSALINSQHDVVGVYSMPDRPAGRGKKLKASEVKTLALEHDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMI--------------VMG-ILPE------- 98
QP + K + ++A+ ++ + + +++ V G ILP
Sbjct: 65 QPDTFKSDEAQAELASLNADVMIVVAYGLLLPKAVLDTPKLGCLNVHGSILPRWRGAAPI 124
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGES------ 141
+T +T+ E L +L I T D + + + +G S
Sbjct: 125 QRALWAGDAETGVTIMQMDEGLDTGDMLHIATCPITAQDTSASLYDKLAELGPSALLDTL 184
Query: 142 -------------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
YA + K EA +DW++ A I R I AFNP+P + S
Sbjct: 185 DLLVTNTAQPEKQNDDLANYAKKLSKEEADIDWTMPATQIERNIRAFNPWP---VCFTSM 241
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
Q + +KIW+A I+ + GT+L + H G+++ CG++ + + +LQ KK +SA
Sbjct: 242 Q--AQTVKIWQATV--IDEQGEAGTVLRSDKH-GVVIACGEHALAITQLQPQGKKPMSAQ 296
Query: 243 EFING 247
+F+NG
Sbjct: 297 DFLNG 301
>gi|339327729|ref|YP_004687422.1| methionyl-tRNA formyltransferase Fmt [Cupriavidus necator N-1]
gi|338167886|gb|AEI78941.1| methionyl-tRNA formyltransferase Fmt [Cupriavidus necator N-1]
Length = 337
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 136/318 (42%), Gaps = 77/318 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L+ ++ + +V +LT+PD +GRG++L SPVK++A + +
Sbjct: 7 LRVAFAGTPEFARVALEAIHAAGFPVVAVLTQPDRPAGRGLQLQASPVKQFAAASGLGPV 66
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP------------------- 97
+QP SL+ GKY + A L D+M+V ILP
Sbjct: 67 LQPRSLRRQGKYPEDAAAAIDALAGTAPDVMVVAAYGLILPAEVLTLPRLGCLNIHGSLL 126
Query: 98 -----------------EDTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKL 130
+T +TL E L I DT K+ + L
Sbjct: 127 PRWRGAAPIHRAIEAGDAETGITLMQMDEGLDTGDMLTREAVPIGPDDTTGKLHDTLAAL 186
Query: 131 FFK------------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
+ PQ G +YA I K+EA LD A + ++ AFNPF
Sbjct: 187 GARLTVAALQELAAGRALAATPQPAEGVTYAEKIAKDEAPLDLRRPAAALANQVRAFNPF 246
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIEST--KKPGTILNVNFHNGILVVCGK-NVIKLL 229
PGA + Q +K W+A L+ S+ PGT+L + G+++ CG+ + +++
Sbjct: 247 PGA-----TVQVGDTVIKCWQAVPLAAASSLPHPPGTVLAAD-AAGVIIACGEGSALQVT 300
Query: 230 ELQKNNKKKISATEFING 247
ELQK ++ A +F+ G
Sbjct: 301 ELQKPGGRRQPAQQFLQG 318
>gi|333891510|ref|YP_004465385.1| methionyl-tRNA formyltransferase [Alteromonas sp. SN2]
gi|332991528|gb|AEF01583.1| methionyl-tRNA formyltransferase [Alteromonas sp. SN2]
Length = 318
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 137/312 (43%), Gaps = 79/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S H+IV + T+PD +GRG KL SPVK A +H I +
Sbjct: 5 LRIIFAGTPDFAAQHLSALLSSTHDIVAVYTQPDRPAGRGKKLTPSPVKVLAQEHEIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SLK NE + L I D+MIV+ ILP+
Sbjct: 65 QPASLK--------NNEAQQTLADINADLMIVVAYGLILPKSVLDAPKLGCLNVHGSILP 116
Query: 99 -----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
+T +T+ E L +L I T+ E D + ++ + +G
Sbjct: 117 KWRGAAPIQRAIWAGDSETGVTIMQMDEGLDTGDMLHIATLPISENDTSASLYEKLAELG 176
Query: 140 E-----------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAK 176
+YA + K EA ++W SA I R + AFNP+P A
Sbjct: 177 PTALIDVVNSIDTLSPVKQDDSEATYAKKLSKEEAFINWHDSAAQIARNVRAFNPWPVAW 236
Query: 177 TYYISYQNKKKFLKIWKAHAL-SIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNN 235
T I QN +KIW + + ++ PGTI+ + H GI+V G N +++ LQ
Sbjct: 237 T-KIESQN----IKIWSVDVIDGLPTSDAPGTIIQADKH-GIVVTTGSNALRINTLQIPG 290
Query: 236 KKKISATEFING 247
KK + A + +N
Sbjct: 291 KKALPAADVVNA 302
>gi|429102050|ref|ZP_19164024.1| Methionyl-tRNA formyltransferase [Cronobacter turicensis 564]
gi|426288699|emb|CCJ90137.1| Methionyl-tRNA formyltransferase [Cronobacter turicensis 564]
Length = 315
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 128/312 (41%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL PVK A ++ I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSSHQVVGVFTQPDRPAGRGKKLMPGPVKVLAQENDIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E L+ + D+M+V+ ILPE
Sbjct: 65 QPKSLR--------PAENQALVAALNADVMVVVAYGLILPEAVLAMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KLS + D YD
Sbjct: 117 RWRGAAPIQRSLWAGDSETGVTIMQMDKGLDTGDMLRKLSCPITADDTSASLYDKLAQLG 176
Query: 127 ------------MTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ + Q + +YA + K EA LDW+LSA + R I AFNP+P
Sbjct: 177 PQGLLATLEDLATGRAVPEKQDDAQATYADKLSKEEARLDWTLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ I Q +K+WKA + +S PGT+L+ GI + ++ L ELQ
Sbjct: 236 VSFFMIDDQP----VKVWKASVIHQQSNAAPGTVLDAG-KQGIQIATADGILNLEELQPA 290
Query: 235 NKKKISATEFIN 246
KK + A + +N
Sbjct: 291 GKKPMLAQDLLN 302
>gi|167617460|ref|ZP_02386091.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis Bt4]
Length = 328
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL +KL LI+D + ++E L PQ + G +YA I K+EA LD
Sbjct: 167 IAPDDTTATLHDKLAAAGATLIVDALVELER-AGALAATPQPDDGITYAEKIGKHEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AF+PFPG LK+W A A+ PGTI++
Sbjct: 226 WRKPATVLARQVRAFDPFPGGAGTLDGVT-----LKLWAADAMPARGDAAPGTIVDAGA- 279
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+G+++ CG+ +++ +LQK K++ A EF+ G
Sbjct: 280 DGVVIACGEGALRVTQLQKPGGKRLPAREFLAGA 313
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YAL+H I +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALEHGITVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GK+ A LL+ D+M+V +LP++
Sbjct: 65 QPPSLRRAGKHPAEAAAALDLLHATPHDVMVVAAYGLLLPQE 106
>gi|54310618|ref|YP_131638.1| methionyl-tRNA formyltransferase [Photobacterium profundum SS9]
gi|73919412|sp|Q6LLJ2.1|FMT_PHOPR RecName: Full=Methionyl-tRNA formyltransferase
gi|46915061|emb|CAG21836.1| Putative Methionyl-tRNA formyltransferase [Photobacterium profundum
SS9]
Length = 314
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 137/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +S+H ++ + T+PD +GRG KL SPVK AL++ + +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSQHEVIAVYTQPDRPAGRGKKLTASPVKNIALENDLPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP SL+ + + L ++ DIM+V+ ILP
Sbjct: 65 QPASLR--------NEDAQQELAALKADIMVVVAYGLLLPKFVLDTPKLGCINVHGSILP 116
Query: 98 ----------------EDTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
E+T +T+ E L +L I T+ D + + + +G
Sbjct: 117 RWRGAAPIQRSIWAGDEETGVTIMQMDEGLDTGDMLTIATLPIEPTDTSATMYDKLAGLG 176
Query: 140 -------------------------ESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+YA + K EA +DW++ A I R I AFNP+P
Sbjct: 177 PNALIDCLSEISAGTAIAEKQNDELANYAKKLNKEEAKIDWAMEATAIERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ QN +K+W A + K PGTIL+ + GI V GK ++L+ELQ
Sbjct: 236 MSYFAVAEQN----VKVWHAVVEAENQGKAPGTILSAD-KQGITVATGKGALRLIELQPP 290
Query: 235 NKKKISATEFIN 246
KK + A + +N
Sbjct: 291 GKKAMKAQDILN 302
>gi|83718636|ref|YP_440688.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis E264]
gi|257140664|ref|ZP_05588926.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis E264]
gi|123767752|sp|Q2T2B1.1|FMT_BURTA RecName: Full=Methionyl-tRNA formyltransferase
gi|83652461|gb|ABC36524.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis E264]
Length = 328
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL +KL LI+D + ++E L PQ + G +YA I K+EA LD
Sbjct: 167 IAPDDTTATLHDKLAAAGATLIVDALVELER-AGALAATPQPDDGITYAEKIGKHEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AF+PFPG LK+W A A+ PGTI++
Sbjct: 226 WRKPATVLARQVRAFDPFPGGAGTLDGVT-----LKLWAADAMPARGDAAPGTIVDAGA- 279
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+G+++ CG+ +++ +LQK K++ A EF+ G
Sbjct: 280 DGVVIACGEGALRVTQLQKPGGKRLPAREFLAGA 313
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YAL+H I +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALEHGITVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GK+ A LL+ D+M+V +LP++
Sbjct: 65 QPPSLRRAGKHPAEAAAALDLLHATPHDVMVVAAYGLLLPQE 106
>gi|395760199|ref|ZP_10440868.1| methionyl-tRNA formyltransferase [Janthinobacterium lividum PAMC
25724]
Length = 318
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M+ +G +P D++ +L +KL L +I++T++K++ L PQ G +YA I
Sbjct: 156 MLAIGRMPIEAGDSTASLHDKLAMLGGKMIVETLRKMQ--QQPLEAVPQPEAGVTYAAKI 213
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
K+EA LD+S A + KI AFNPFPGA Q +KIW A L +S + PG
Sbjct: 214 AKDEAALDFSQPALELGLKIRAFNPFPGA-----CGQVDGVTIKIWAADVLEADSKEAPG 268
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
+L + +GI+V CG ++L ELQK K++ A EFI G K F+
Sbjct: 269 QVLAADAQHGIVVACGNGSLRLTELQKPGGKRLPAAEFIKGFPLEGKRFV 318
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 69/107 (64%), Gaps = 8/107 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AA L L+ + +I L+LT+PD +GRGM+L+ S VK+YA +H I+++
Sbjct: 1 MKVIFAGTPEFAATALKDLHEAGFDIPLVLTQPDRPAGRGMQLHASAVKQYAQQHGIEVL 60
Query: 61 QPISLKLNGKYHK----IANETHKLLNKIEFDIMIVMG---ILPEDT 100
QP+SL+++ K + +LL+ +++D+M+V ILP T
Sbjct: 61 QPLSLRMDSKDPQRAAEATAAHARLLS-LDYDVMVVAAYGLILPRST 106
>gi|225075033|ref|ZP_03718232.1| hypothetical protein NEIFLAOT_00032 [Neisseria flavescens
NRL30031/H210]
gi|224953638|gb|EEG34847.1| hypothetical protein NEIFLAOT_00032 [Neisseria flavescens
NRL30031/H210]
Length = 308
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ + +
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLTVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ +T H LN
Sbjct: 61 QPEKLRNNAEALQMLRDTGADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEADDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMGLGAEAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA +DW+ SA I RKI AFNP P A +
Sbjct: 181 LQRLQAE-GRLNAVKQPEEGVTYAQKLSKEEARIDWNESADIIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A ++ + K G +L+ +G+LV CG++ + + ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEVVAKQG--KAGEVLSCT-SDGLLVACGEHALNITELQPSGSKRM 291
Query: 240 SATEFING 247
S F G
Sbjct: 292 SIQAFAAG 299
>gi|167900764|ref|ZP_02487969.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei NCTC
13177]
Length = 327
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALERGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + + + L L+ H +
Sbjct: 65 QPPSLRRAGKYPAEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
L++D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLVVDALAELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 243 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|365834672|ref|ZP_09376115.1| methionyl-tRNA formyltransferase [Hafnia alvei ATCC 51873]
gi|364568785|gb|EHM46423.1| methionyl-tRNA formyltransferase [Hafnia alvei ATCC 51873]
Length = 311
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 142/314 (45%), Gaps = 84/314 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AA LD L +S+H IV + T+PD +GRG KL SPVK A +H++ +
Sbjct: 1 MRIIFAGTPDFAARHLDALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHNLPVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+ + KL++ + D+M+V+ ILP+
Sbjct: 61 QPVSLR--------PEDNQKLVSDLNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLP 112
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF- 131
D L + L K+S + YD KL
Sbjct: 113 RWRGAAPIQRALWAGDAETGVTIMQMDVGLDTGDMLHKVSCPITAQDTSATLYD--KLAD 170
Query: 132 FKPQ------SNIGESYAPLIKKNEAVL-------------DWSLSAKTIMRKINAFNPF 172
PQ + + A K++EA++ +W+LSA + R + AFNP+
Sbjct: 171 MGPQGLLVTLAALANGTATPEKQDEALVTYAEKLSKEEARLNWTLSAAQLERCVRAFNPW 230
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P + N+ +K+W++ A++ E + PGTI++ + NGI V + ++ + +LQ
Sbjct: 231 P---VSFFMIDNQP--VKVWQSQAIAAEHNQAPGTIISAD-KNGIAVATAEGLLLMTQLQ 284
Query: 233 KNNKKKISATEFIN 246
+ KK +SA + +N
Sbjct: 285 PSGKKSMSAQDLLN 298
>gi|167579359|ref|ZP_02372233.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis TXDOH]
Length = 328
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL +KL LI+D + ++E L PQ + G +YA I K+EA LD
Sbjct: 167 IAPDDTTATLHDKLAAAGATLIVDALVELER-AGALDATPQPDDGITYAEKIGKHEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AF+PFPG LK+W A A+ PGTI++
Sbjct: 226 WRKPATVLARQVRAFDPFPGGAGTLDGVT-----LKLWAADAMPARGDAAPGTIVDAGA- 279
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+G+++ CG+ +++ +LQK K++ A EF+ G
Sbjct: 280 DGVVIACGEGALRVTQLQKPGGKRLPAREFLAGA 313
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YAL+H I +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALEHGITVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GK+ A LL+ D+M+V +LP++
Sbjct: 65 QPPSLRRAGKHPAEAAAALDLLHATPHDVMVVAAYGLLLPQE 106
>gi|167855266|ref|ZP_02478035.1| methionyl-tRNA formyltransferase [Haemophilus parasuis 29755]
gi|167853630|gb|EDS24875.1| methionyl-tRNA formyltransferase [Haemophilus parasuis 29755]
Length = 316
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 142/309 (45%), Gaps = 69/309 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NSEHN++ + T+PD +GRG KL SPVK+ A H I +
Sbjct: 4 LNIIFAGTPDFAATHLQALLNSEHNVIAVYTQPDKPAGRGKKLQASPVKQLAEAHHIPVY 63
Query: 61 QPISLK----------LNG--------------------KYHKI---------------- 74
QP SL+ LN KY +
Sbjct: 64 QPKSLRKEEAQAELQALNADVMVVVAYGLILPEAVLKAPKYGCLNVHGSLLPRWRGAAPI 123
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A +T + ++ DI + G IL +TS +L KL +L+ +++ +
Sbjct: 124 QRSIWAGDTETGVTIMQMDIGLDTGDMLHKVTTPILATETSASLYAKLAELAPPALLEVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGES--YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+T FKP+ E YA + K EA LDW+++A + R I AFNP P A
Sbjct: 184 N----GLTSGQFKPEKQQDEQANYAEKLTKEEAKLDWNMTACQLERNIRAFNPAPMAYLT 239
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ + +++ +K+++A L K GT+L V+ NGI + + V+ + +LQ KK
Sbjct: 240 LMVNEVEER-IKVYQAEVLP-HQEKTVGTVLAVD-KNGIQIATQQGVLNITQLQPAGKKP 296
Query: 239 ISATEFING 247
+S +F+NG
Sbjct: 297 MSVQDFLNG 305
>gi|53724950|ref|YP_101983.1| methionyl-tRNA formyltransferase [Burkholderia mallei ATCC 23344]
gi|254182252|ref|ZP_04888849.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1655]
gi|254203664|ref|ZP_04910024.1| methionyl-tRNA formyltransferase [Burkholderia mallei FMH]
gi|254360306|ref|ZP_04976576.1| methionyl-tRNA formyltransferase [Burkholderia mallei 2002721280]
gi|73919383|sp|Q62MT4.1|FMT_BURMA RecName: Full=Methionyl-tRNA formyltransferase
gi|52428373|gb|AAU48966.1| methionyl-tRNA formyltransferase [Burkholderia mallei ATCC 23344]
gi|147745176|gb|EDK52256.1| methionyl-tRNA formyltransferase [Burkholderia mallei FMH]
gi|148029546|gb|EDK87451.1| methionyl-tRNA formyltransferase [Burkholderia mallei 2002721280]
gi|184212790|gb|EDU09833.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1655]
Length = 327
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 133/317 (41%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAFERGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + + + L L+ H +
Sbjct: 65 QPPSLRRAGKYPAEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 243 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|421476803|ref|ZP_15924666.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CF2]
gi|400227645|gb|EJO57633.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CF2]
Length = 327
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++++ + L+LT+PD +GR G+ +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHDAGFAVPLVLTQPDRPAGRGMKLQASAVKRYALEHGLPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAAEAIEL-LRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMIQASRIAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALARLERDGT-LAATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +KIW A + PGTI+ +G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKIWAAEPATGRGDAAPGTIVEAA-PDGVIVACGTGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|53717763|ref|YP_106749.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei K96243]
gi|167813634|ref|ZP_02445314.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 91]
gi|418375560|ref|ZP_12965633.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 354a]
gi|418552170|ref|ZP_13117060.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 354e]
gi|73919384|sp|Q63YR6.1|FMT_BURPS RecName: Full=Methionyl-tRNA formyltransferase
gi|52208177|emb|CAH34108.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei K96243]
gi|385373567|gb|EIF78587.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 354e]
gi|385378240|gb|EIF82722.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 354a]
Length = 327
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 133/317 (41%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALERGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + + + L L+ H +
Sbjct: 65 QPPSLRRAGKYPAEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 243 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|53729237|ref|ZP_00133763.2| COG0223: Methionyl-tRNA formyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209051|ref|YP_001054276.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|307250866|ref|ZP_07532794.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|166214869|sp|A3N2N5.1|FMT_ACTP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|126097843|gb|ABN74671.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306857116|gb|EFM89244.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 316
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK+ A +H+I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQHNIPVY 63
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP SL+ LN + N LL +
Sbjct: 64 QPKSLRKEDAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAAPI 123
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ DI + G I ++TS +L KL +L+ +++ +
Sbjct: 124 QRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLEVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E K + Q + +YA + K EA LDW+L+A + R I AFNP+P +
Sbjct: 184 NGLESQAFKA--EKQDDALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWP-ISFLTL 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+++A+ L ++ K GT+L + NGI + + V+ + +LQ + KK +S
Sbjct: 241 EVDGVEQSVKVYQANVLPHQA-KAAGTVLQAD-KNGIQIATQEGVLNITQLQPSGKKPMS 298
Query: 241 ATEFING 247
+F+NG
Sbjct: 299 VQDFLNG 305
>gi|386860241|ref|YP_006273190.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1026b]
gi|418537468|ref|ZP_13103108.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1026a]
gi|385350177|gb|EIF56729.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1026a]
gi|385657369|gb|AFI64792.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1026b]
Length = 327
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQTSAVKRYAFERGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + + + L L+ H +
Sbjct: 65 QPPSLRRAGKYPAEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
L++D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLVVDALVELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 243 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|303253469|ref|ZP_07339611.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248634|ref|ZP_07530648.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302647713|gb|EFL77927.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854845|gb|EFM87034.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 316
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK+ A +H+I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQHNIPVY 63
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP SL+ LN + N LL +
Sbjct: 64 QPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAAPI 123
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ DI + G I ++TS +L KL +L+ +++ +
Sbjct: 124 QRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLEVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E K + Q + +YA + K EA LDW+L+A + R I AFNP+P +
Sbjct: 184 NGLESQAFKA--EKQDDALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWP-ISFLTL 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+++A+ L ++ K GT+L + NGI + + V+ + +LQ + KK +S
Sbjct: 241 EVDGVEQSVKVYQANVLPHQA-KAAGTVLQAD-KNGIQIATQEGVLNITQLQPSGKKPMS 298
Query: 241 ATEFING 247
+F+NG
Sbjct: 299 VQDFLNG 305
>gi|76808755|ref|YP_331762.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1710b]
gi|167736560|ref|ZP_02409334.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 14]
gi|167822178|ref|ZP_02453649.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 9]
gi|167892271|ref|ZP_02479673.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 7894]
gi|167917030|ref|ZP_02504121.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei BCC215]
gi|226194611|ref|ZP_03790206.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei
Pakistan 9]
gi|237810339|ref|YP_002894790.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei
MSHR346]
gi|254188217|ref|ZP_04894729.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|254197165|ref|ZP_04903588.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei S13]
gi|254258343|ref|ZP_04949397.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1710a]
gi|123600692|sp|Q3JXE1.1|FMT_BURP1 RecName: Full=Methionyl-tRNA formyltransferase
gi|76578208|gb|ABA47683.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1710b]
gi|157935897|gb|EDO91567.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|169653907|gb|EDS86600.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei S13]
gi|225933312|gb|EEH29304.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei
Pakistan 9]
gi|237506862|gb|ACQ99180.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei
MSHR346]
gi|254217032|gb|EET06416.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1710a]
Length = 327
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAFERGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + + + L L+ H +
Sbjct: 65 QPPSLRRAGKYPAEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
L++D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLVVDALVELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 243 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|239818069|ref|YP_002946979.1| methionyl-tRNA formyltransferase [Variovorax paradoxus S110]
gi|259647286|sp|C5CQE1.1|FMT_VARPS RecName: Full=Methionyl-tRNA formyltransferase
gi|239804646|gb|ACS21713.1| methionyl-tRNA formyltransferase [Variovorax paradoxus S110]
Length = 318
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 70/311 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++FAGT A A L+ + + H I L+L++PD +GRGMKL SPVK+ A+ H +
Sbjct: 4 LKVVFAGTPEFARAALEAIAAAGHEIALVLSQPDRPAGRGMKLQASPVKQCAVAHGWPVA 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+L+GKY + A + L D+M+V ILP+
Sbjct: 64 QPRSLRLDGKYPQDAAAAREALLAARPDVMVVAAYGLILPQWVLDLPVHGCLNIHASLLP 123
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFF 132
D L + L + + + DT ++ + +L
Sbjct: 124 RWRGAAPIHRAIEAGDAQTGITIMQMDAGLDTGDMLLREAVDIGSDTTARLHDRLAELGG 183
Query: 133 K---------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
+ PQ G +YA ++K+EA +DW+ A I+R+I AF+PFPGA +
Sbjct: 184 RLIVQALADIGRLARTPQPAEGVTYASKVEKHEAQIDWNQPADAIVRRIRAFDPFPGANS 243
Query: 178 YYISYQNKKKFLKIWKAHAL-SIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
+ +K+W AHA E + PGT+L V+ + V +V+ ELQ+
Sbjct: 244 LL-----DGETIKLWAAHAAPPAEVSAAPGTLLAVSDAG-VAVAAAGSVVMATELQRPGG 297
Query: 237 KKISATEFING 247
K+++ +F+ G
Sbjct: 298 KRLAVADFLRG 308
>gi|429093878|ref|ZP_19156450.1| Methionyl-tRNA formyltransferase [Cronobacter dublinensis 1210]
gi|426741183|emb|CCJ82563.1| Methionyl-tRNA formyltransferase [Cronobacter dublinensis 1210]
Length = 315
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 132/312 (42%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L +S H IV + T+PD +GRG KL PVK A ++ + +
Sbjct: 5 LRIIFAGTPDFAARHLEALLSSSHEIVGVFTQPDRPAGRGKKLMPGPVKVLAEENGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E L+ + D+M+V+ ILPE
Sbjct: 65 QPKSLR--------PAENQALVAALNADVMVVVAYGLILPEAVLAMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD-MTKL- 130
D L + L KLS + D YD + +L
Sbjct: 117 RWRGAAPIQRSLWAGDTETGVTIMQMDKGLDTGDMLRKLSCPITTDDTSASLYDKLAQLG 176
Query: 131 ----------------FFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ Q + +YA + K EA LDW+LSA + R I AFNP+P
Sbjct: 177 PQGMLATLSDLASGAAVPEKQDDTNATYAEKLSKEEARLDWTLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+Y++ + +K+WKA L +S PGT+L GI + ++ L ELQ
Sbjct: 236 -VSYFMI---DDQPVKVWKASVLDQQSKATPGTVLEAG-KAGIKIATADGILNLEELQPA 290
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 291 GKKAMSAQDLLN 302
>gi|126439129|ref|YP_001057205.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 668]
gi|134284105|ref|ZP_01770799.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 305]
gi|167717518|ref|ZP_02400754.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei DM98]
gi|217425088|ref|ZP_03456584.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 576]
gi|418545233|ref|ZP_13110493.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1258a]
gi|418551625|ref|ZP_13116535.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1258b]
gi|166214882|sp|A3N4D4.1|FMT_BURP6 RecName: Full=Methionyl-tRNA formyltransferase
gi|126218622|gb|ABN82128.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 668]
gi|134244557|gb|EBA44661.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 305]
gi|217392108|gb|EEC32134.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 576]
gi|385346524|gb|EIF53200.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1258a]
gi|385347344|gb|EIF54001.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1258b]
Length = 327
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALERGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + + + L L+ H +
Sbjct: 65 QPPSLRRAGKYPAEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
L++D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLVVDALVELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 243 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|197287100|ref|YP_002152972.1| methionyl-tRNA formyltransferase [Proteus mirabilis HI4320]
gi|227354904|ref|ZP_03839318.1| methionyl-tRNA formyltransferase [Proteus mirabilis ATCC 29906]
gi|425070313|ref|ZP_18473427.1| methionyl-tRNA formyltransferase [Proteus mirabilis WGLW6]
gi|238690086|sp|B4F1L6.1|FMT_PROMH RecName: Full=Methionyl-tRNA formyltransferase
gi|194684587|emb|CAR46443.1| methionyl-tRNA formyltransferase [Proteus mirabilis HI4320]
gi|227164986|gb|EEI49825.1| methionyl-tRNA formyltransferase [Proteus mirabilis ATCC 29906]
gi|404595445|gb|EKA95989.1| methionyl-tRNA formyltransferase [Proteus mirabilis WGLW6]
Length = 316
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 149/307 (48%), Gaps = 69/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +++H+IV +LT PD +GRG KL +PVK+ AL ++I +
Sbjct: 5 LRIIFAGTPDFAARHLAALLSTQHHIVGVLTPPDKPAGRGKKLTINPVKELALTNNIPVY 64
Query: 61 QPISLKLNGKYHKI---------------------------------------------- 74
QP SLK + I
Sbjct: 65 QPTSLKPEENHEWIKALQPDVMIVVAYGMILPKAVLDIPRLGCLNVHGSLLPKWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A +T + ++ D+ + G I +DTS +L KL +L +I+T+
Sbjct: 125 QRALWAGDTETGVTIMQMDVGLDTGDMLYKASCPITHQDTSASLYAKLAELGPKALINTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I +L + Q + +YA + K EA ++WSLSA+ I R I AFNP+P ++++
Sbjct: 185 DLIISG--ELKAEKQDDSLANYAEKLSKEEAKINWSLSAQQIERCIRAFNPWP--MSFFM 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKK-PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ +K+W+A ++ ++T + PGT+L + GI +V G+ ++ + +LQ + KK +
Sbjct: 241 L---DDQPVKVWEAQVIASDNTNQIPGTLLKAD-KTGIYIVTGEGILNITKLQPSGKKPM 296
Query: 240 SATEFIN 246
++ +F+N
Sbjct: 297 ASADFLN 303
>gi|121598225|ref|YP_994100.1| methionyl-tRNA formyltransferase [Burkholderia mallei SAVP1]
gi|124384986|ref|YP_001028238.1| methionyl-tRNA formyltransferase [Burkholderia mallei NCTC 10229]
gi|126448980|ref|YP_001081880.1| methionyl-tRNA formyltransferase [Burkholderia mallei NCTC 10247]
gi|167003293|ref|ZP_02269082.1| methionyl-tRNA formyltransferase [Burkholderia mallei PRL-20]
gi|238561915|ref|ZP_00441210.2| methionyl-tRNA formyltransferase [Burkholderia mallei GB8 horse 4]
gi|254176953|ref|ZP_04883610.1| methionyl-tRNA formyltransferase [Burkholderia mallei ATCC 10399]
gi|254208640|ref|ZP_04914988.1| methionyl-tRNA formyltransferase [Burkholderia mallei JHU]
gi|121227035|gb|ABM49553.1| methionyl-tRNA formyltransferase [Burkholderia mallei SAVP1]
gi|124293006|gb|ABN02275.1| methionyl-tRNA formyltransferase [Burkholderia mallei NCTC 10229]
gi|126241850|gb|ABO04943.1| methionyl-tRNA formyltransferase [Burkholderia mallei NCTC 10247]
gi|147750516|gb|EDK57585.1| methionyl-tRNA formyltransferase [Burkholderia mallei JHU]
gi|160697994|gb|EDP87964.1| methionyl-tRNA formyltransferase [Burkholderia mallei ATCC 10399]
gi|238523610|gb|EEP87047.1| methionyl-tRNA formyltransferase [Burkholderia mallei GB8 horse 4]
gi|243061149|gb|EES43335.1| methionyl-tRNA formyltransferase [Burkholderia mallei PRL-20]
Length = 337
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 133/317 (41%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 15 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAFERGMAVA 74
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + + + L L+ H +
Sbjct: 75 QPPSLRRAGKYPAEAVAALDL-LHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLL 133
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL +KL
Sbjct: 134 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAA 193
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 194 GARLIVDALVELER-TGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 252
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A A+ PGTI+++ +G+++ CG+ +++ +L
Sbjct: 253 FPGGAGTL-----DGATLKLWAADAVPGRDDAAPGTIVDIG-PDGVVIACGEGALRVTQL 306
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 307 QKPGGKRLPAREFLAGA 323
>gi|340363532|ref|ZP_08685862.1| methionyl-tRNA formyltransferase [Neisseria macacae ATCC 33926]
gi|339885677|gb|EGQ75384.1| methionyl-tRNA formyltransferase [Neisseria macacae ATCC 33926]
Length = 308
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLAPSPVKHAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYTIQPTDTANEVHDALMNLGAAAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA +DW+ SA I RKI AFNP P A +
Sbjct: 181 LQQLKTE-GRLKSVKQPEKGVTYAQKLSKEEARIDWNESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A ++ + + G +L+ + +G++V CG+N +K+ ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEVVAQQG--RAGEVLSCSA-DGLIVACGENALKITELQPSGSKRM 291
Query: 240 SATEFING 247
F G
Sbjct: 292 PIAAFAAG 299
>gi|425070625|ref|ZP_18473731.1| methionyl-tRNA formyltransferase [Proteus mirabilis WGLW4]
gi|404600147|gb|EKB00595.1| methionyl-tRNA formyltransferase [Proteus mirabilis WGLW4]
Length = 316
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 149/307 (48%), Gaps = 69/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +++H+IV +LT PD +GRG KL +PVK+ AL ++I +
Sbjct: 5 LRIIFAGTPDFAARHLAALLSTQHHIVGVLTPPDKPAGRGKKLTINPVKELALTNNIPVY 64
Query: 61 QPISLKLNGKYHKI---------------------------------------------- 74
QP SLK + I
Sbjct: 65 QPTSLKPEENHEWIKALLPDVMIVVAYGMILPKAVLDIPRLGCLNVHGSLLPKWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A +T + ++ D+ + G I +DTS +L KL +L +I+T+
Sbjct: 125 QRALWAGDTETGVTIMQMDVGLDTGDMLYKASCPITHQDTSASLYAKLAELGPKALINTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I +L + Q + +YA + K EA ++WSLSA+ I R I AFNP+P ++++
Sbjct: 185 DLIISG--ELKAEKQDDSLANYAEKLSKEEAKINWSLSAQQIERCIRAFNPWP--MSFFM 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKK-PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ +K+W+A ++ ++T + PGT+L + GI +V G+ ++ + +LQ + KK +
Sbjct: 241 L---DDQPVKVWEAQVIASDNTNQIPGTLLKAD-KTGIYIVTGEGILNITKLQPSGKKPM 296
Query: 240 SATEFIN 246
++ +F+N
Sbjct: 297 ASADFLN 303
>gi|219871971|ref|YP_002476346.1| methionyl-tRNA formyltransferase [Haemophilus parasuis SH0165]
gi|254789356|sp|B8F7U6.1|FMT_HAEPS RecName: Full=Methionyl-tRNA formyltransferase
gi|219692175|gb|ACL33398.1| methionyl-tRNA formyltransferase [Haemophilus parasuis SH0165]
Length = 316
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 142/309 (45%), Gaps = 69/309 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NSEHN++ + T+PD +GRG KL SPVK+ A H I +
Sbjct: 4 LNIIFAGTPDFAATHLQALLNSEHNVIAVYTQPDKPAGRGKKLQASPVKQLAEVHHIPVY 63
Query: 61 QPISLK----------LNG--------------------KYHKI---------------- 74
QP SL+ LN KY +
Sbjct: 64 QPKSLRKEEAQAELQALNADVMVVVAYGLILPEAVLKAPKYGCLNVHGSLLPRWRGAAPI 123
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A +T + ++ DI + G IL +TS +L KL +L+ +++ +
Sbjct: 124 QRSIWAGDTETGVTIMQMDIGLDTGDMLHKVTTPILATETSASLYAKLAELAPPALLEVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGES--YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+T FKP+ E YA + K EA LDW+++A + R I AFNP P A
Sbjct: 184 N----GLTSGQFKPEKQQDEQANYAEKLTKEEAKLDWNMTACQLERNIRAFNPAPMAYLT 239
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ + +++ +K+++A L K GT+L V+ NGI + + V+ + +LQ KK
Sbjct: 240 LMVNEVEER-IKVYQAEVLP-HQEKTVGTVLAVD-KNGIQIATQQGVLNITQLQPAGKKP 296
Query: 239 ISATEFING 247
+S +F+NG
Sbjct: 297 MSVQDFLNG 305
>gi|294669087|ref|ZP_06734173.1| methionyl-tRNA formyltransferase [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309079|gb|EFE50322.1| methionyl-tRNA formyltransferase [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 308
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLAPSPVKQAALELGLRVA 60
Query: 61 QPISLK------------------------------LNGKYHKIANETHKLLNK------ 84
QP L+ L+ H N LL +
Sbjct: 61 QPEKLRNNAEALQMLKGVDADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMSLGAAAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA ++W+ SA I RKI AFNP P A +
Sbjct: 181 LQQLKTE-GRLKSVKQPEEGVTYAQKLSKEEARINWNESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A A++ + + G +L+ + +G++V CG N +K+ ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEAVAQQG--RAGEVLSCS-SDGLIVACGANALKITELQPSGGKRM 291
Query: 240 SATEFING 247
F G
Sbjct: 292 DIAAFAAG 299
>gi|165977023|ref|YP_001652616.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150918|ref|YP_001969443.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303249884|ref|ZP_07336087.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307246509|ref|ZP_07528581.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253250|ref|ZP_07535124.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255495|ref|ZP_07537301.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259946|ref|ZP_07541659.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307262072|ref|ZP_07543726.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307264272|ref|ZP_07545861.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|238687508|sp|B0BRR3.1|FMT_ACTPJ RecName: Full=Methionyl-tRNA formyltransferase
gi|238692355|sp|B3GYS0.1|FMT_ACTP7 RecName: Full=Methionyl-tRNA formyltransferase
gi|165877124|gb|ABY70172.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916049|gb|ACE62301.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302651275|gb|EFL81428.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852572|gb|EFM84805.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306859237|gb|EFM91276.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861537|gb|EFM93525.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865974|gb|EFM97849.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868251|gb|EFN00074.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870336|gb|EFN02091.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 316
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 142/307 (46%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK+ A +H+I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQHNIPVY 63
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP SL+ LN + N LL +
Sbjct: 64 QPKSLRKEDAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAAPI 123
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ DI + G I ++TS +L KL +L+ +++ +
Sbjct: 124 QRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLEVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E K + Q +YA + K EA LDW+L+A + R I AFNP+P +
Sbjct: 184 NGLESQAFKA--EKQDEALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWP-ISFLTL 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+++A+ L ++ K GT+L + NGI + + V+ + +LQ + KK +S
Sbjct: 241 EVDGVEQSVKVYQANVLPHQA-KAAGTVLQAD-KNGIQIATQEGVLNITQLQPSGKKPMS 298
Query: 241 ATEFING 247
+F+NG
Sbjct: 299 VQDFLNG 305
>gi|322513189|ref|ZP_08066318.1| methionyl-tRNA formyltransferase [Actinobacillus ureae ATCC 25976]
gi|322121041|gb|EFX92871.1| methionyl-tRNA formyltransferase [Actinobacillus ureae ATCC 25976]
Length = 316
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 142/307 (46%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK+ A +H+I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALLDSEHNVITVYTQPDKPAGRGKKLQTSPVKQLAEQHNIPVY 63
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP SL+ LN + N LL +
Sbjct: 64 QPKSLRNEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAAPI 123
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ DI + G I ++TS +L KL +L+ +++ +
Sbjct: 124 QRAIWAGDPETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLEVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E K + Q +YA + K EA LDW+L+A + R I AFNP+P +
Sbjct: 184 NGLESQAFKA--EKQDEALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWP-ISFLTL 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+++A+ L ++ K GT+L V+ NGI + V+ + +LQ + KK +S
Sbjct: 241 EVDGVEQSVKVYQANVLPHQA-KVAGTVLQVD-KNGIQIATQDGVLNITQLQPSGKKPMS 298
Query: 241 ATEFING 247
+F+NG
Sbjct: 299 VQDFLNG 305
>gi|161526292|ref|YP_001581304.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
gi|189348994|ref|YP_001944622.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
gi|238687008|sp|A9AC69.1|FMT_BURM1 RecName: Full=Methionyl-tRNA formyltransferase
gi|160343721|gb|ABX16807.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
gi|189333016|dbj|BAG42086.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
Length = 327
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL ++L LI+D + ++E D T L PQ G +YA I K+EA LD
Sbjct: 167 IAPDDTTATLHDRLAADGARLIVDALARLERDGT-LAATPQPADGVTYAEKIGKHEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AF+PFPG +KIW A + PGTI+
Sbjct: 226 WRKPADVLARQVRAFDPFPGGVATL-----DGAAIKIWAAEPATGRGDAAPGTIVEAA-P 279
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG +++ +LQK K++ A EF+ G
Sbjct: 280 DGVIVACGTGALRVTQLQKPGGKRLPAREFLAG 312
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++++ L+LT+PD +GRGMKL S VK+YAL+H + +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHDAGFAAPLVLTQPDRPAGRGMKLQASAVKRYALEHGLPVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY A E +LL D+M+V +LP++
Sbjct: 65 QPPSLRRAGKYPAEAAEAIELLRATPHDVMVVAAYGLLLPQE 106
>gi|402565110|ref|YP_006614455.1| methionyl-tRNA formyltransferase [Burkholderia cepacia GG4]
gi|402246307|gb|AFQ46761.1| methionyl-tRNA formyltransferase [Burkholderia cepacia GG4]
Length = 327
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 130/316 (41%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARVAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERDGT-LPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +K+W A ++ PGTI+ G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAARGDAAPGTIVEAA-PEGVVVACGSGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|307257665|ref|ZP_07539424.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863840|gb|EFM95764.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 316
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 141/307 (45%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK+ A +H+I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQHNIPVY 63
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP SL+ LN + N LL +
Sbjct: 64 QPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAAPI 123
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ DI + G I E+TS +L KL +L+ +++ +
Sbjct: 124 QRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAAEETSASLYAKLAELAPPALLEVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E K + Q + +YA + K EA LDW+L+A + R I AF P+P +
Sbjct: 184 NGLESQAFKA--EKQDDALSNYAEKLSKEEAKLDWNLTACQLERNIRAFKPWP-ISFLTL 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+++A+ L ++ K GT+L + NGI + V+ + +LQ + KK +S
Sbjct: 241 EVDGVEQSVKVYQANVLPHQA-KAAGTVLQAD-RNGIQIATQDGVLNITQLQPSGKKPMS 298
Query: 241 ATEFING 247
+F+NG
Sbjct: 299 VQDFLNG 305
>gi|260892751|ref|YP_003238848.1| methionyl-tRNA formyltransferase [Ammonifex degensii KC4]
gi|260864892|gb|ACX51998.1| methionyl-tRNA formyltransferase [Ammonifex degensii KC4]
Length = 311
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 137/309 (44%), Gaps = 72/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI--- 57
M+++F GT A L+ L + H +VL++T+PD GRG KL PVK++AL+H
Sbjct: 1 MRLVFMGTPDFAIPSLEALIRAGHKLVLVVTQPDRPKGRGGKLTPPPVKEWALRHGFPCL 60
Query: 58 ----------------------------KIIQPISLKLNG------------KYHKIANE 77
KI+ P L L+ KY A
Sbjct: 61 QPTRLKDPAFLATLREAKPEAIVVVAYGKILPPEVLNLSPRGCINLHASLLPKYRGAAPI 120
Query: 78 THKLL-------------------NKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIID 118
H L+ I +V+G E+ +L ++L +L L+
Sbjct: 121 QHALIAGERETGVTTMLMDEGMDTGDILLQESLVVGE--EENFGSLHDRLAQLGAELLCR 178
Query: 119 TIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
T+ ++ K+ +PQ + +YAP ++ + ++ W A+ I + A +P PGA+T+
Sbjct: 179 TLSL--WEEGKIKPQPQDHSQATYAPPLRSEDEIIRWEEPAEKIKNLVRALDPVPGARTF 236
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ + K LKIW+A AL+ PG +L ++ GI+V G+ + +LELQ K+
Sbjct: 237 W-----QGKVLKIWRARALTGPFGGVPGEVLALD-PEGIVVRAGRGALLVLELQLAGGKR 290
Query: 239 ISATEFING 247
+ A+EF+ G
Sbjct: 291 LKASEFLRG 299
>gi|283788077|ref|YP_003367942.1| methionyl-tRNA formyltransferase [Citrobacter rodentium ICC168]
gi|282951531|emb|CBG91230.1| methionyl-tRNA formyltransferase [Citrobacter rodentium ICC168]
Length = 315
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 137/324 (42%), Gaps = 87/324 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+SL+ H +A+ + D+M+V+ ILP+
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF- 131
D L + L KL+ + + YD KL
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGTLYD--KLAE 174
Query: 132 FKPQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPF 172
PQ + E A K++EA+ +DWSLSA + R + AFNP+
Sbjct: 175 LGPQGLIDTLKQLAEGRATPEKQDEALVTHAEKLSKEEARIDWSLSAAQLERCVRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P ++ + +K+W+A + + PGTIL + GI V G ++ LL LQ
Sbjct: 235 P---MSWLEIDGQP--VKVWQATVIDAPTQAAPGTILEAS-KQGIQVATGDGILNLLSLQ 288
Query: 233 KNNKKKISATEFINGCIKNIKYFI 256
KK +SA + +N ++FI
Sbjct: 289 PAGKKAMSAQDLLN---SRREWFI 309
>gi|392980963|ref|YP_006479551.1| methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392326896|gb|AFM61849.1| methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 315
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 141/325 (43%), Gaps = 89/325 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAGRGKKLMPSPVKVLAEEHGLPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ + D+M+V+ ILP+
Sbjct: 65 QPASLR--------PPENQQLVADLNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF- 131
D L + L KL+ + D YD KL
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMKMDVGLDTGDMLYKLACPITADDTSATLYD--KLAD 174
Query: 132 FKPQSNI-------GESYAPLIK------------KNEAVLDWSLSAKTIMRKINAFNPF 172
PQ I + AP ++ K EA +DWSLSA + R I AFNP+
Sbjct: 175 LGPQGLIKTLQQLADNTAAPEVQDEALVTYAEKLSKEEARVDWSLSAAQLERCIRAFNPW 234
Query: 173 PGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
P +S+ ++ +K+WKA + ++ +PGTI+ + NGI V + ++ L L
Sbjct: 235 P------MSWMMIDEQPVKVWKASVIEGNTSAEPGTIIEAS-KNGIQVATAEGILNLESL 287
Query: 232 QKNNKKKISATEFINGCIKNIKYFI 256
Q KK +SA + +N ++FI
Sbjct: 288 QPAGKKAMSAQDLLN---SRREWFI 309
>gi|423687273|ref|ZP_17662081.1| methionyl-tRNA formyltransferase [Vibrio fischeri SR5]
gi|371493532|gb|EHN69134.1| methionyl-tRNA formyltransferase [Vibrio fischeri SR5]
Length = 315
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S H ++ + T+PD +GRG KL SPVK+ AL+H+I +
Sbjct: 5 LRIIFAGTPDFAARHLSALIDSHHEVIGVYTQPDRPAGRGKKLTASPVKELALEHNIPVF 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADQNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ +KL +L + ++D +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYDKLAELGPVALVDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I D + + K + +YA + K EA +DW++ A I R + AFNP+P +
Sbjct: 185 SDI-ADGSAIAQKQDDELA-NYAKKLSKEEAKIDWTMDAIAIERCVRAFNPWP---MSHF 239
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
S ++K +K+W++ S PGTI+ + GI V G + I +LQ KK +
Sbjct: 240 SVEDKA--IKVWQSRVESYTGNATPGTIIQAD-KTGIYVATGSDAIVFEQLQVPGKKAMG 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|171319441|ref|ZP_02908546.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria MEX-5]
gi|171095333|gb|EDT40314.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria MEX-5]
Length = 327
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 131/316 (41%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIDEARVAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERD-GALPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +K+W A ++ PGTI++ G++V CG + +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAARGDAAPGTIVDAA-PEGVIVACGSDALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|386334942|ref|YP_006031113.1| 10-formyltetrahydrofolate:l-methionyl-tRNA(fmet)
N-formyltransferase [Ralstonia solanacearum Po82]
gi|334197392|gb|AEG70577.1| 10-formyltetrahydrofolate:l-methionyl-tRNA(fmet)
N-formyltransferase [Ralstonia solanacearum Po82]
Length = 327
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++T+ ++ D +L PQ G +YA I
Sbjct: 160 MITMEHVPIGLTDTTGTLHDTLAALGGRMVVETLARLAQD-GRLPATPQPAEGVTYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K+EA LDWS + ++R+++AFNPFPGA S + +K W+A AL + +P
Sbjct: 219 AKDEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVTIKFWQATALPDRPADAEP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYFIS 257
GT+L + +G+++ CG +++ +LQK K++ A EF+ G ++ + F S
Sbjct: 274 GTVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLAVRPGQRFAS 325
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM L SPVK+YA+ H + I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGFPLVAVLSQPDRPAGRGMHLQASPVKQYAISHGLGPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A E L+ D+M+V ILP++
Sbjct: 65 LQPPSLRRAGKYPQEATEAIDALSAQRPDVMVVAAYGLILPQE 107
>gi|291526148|emb|CBK91735.1| methionyl-tRNA formyltransferase [Eubacterium rectale DSM 17629]
gi|291527118|emb|CBK92704.1| methionyl-tRNA formyltransferase [Eubacterium rectale M104/1]
Length = 310
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 68/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT + L+ + + H + L++T+PD GRG + ++PVK+ AL H I++
Sbjct: 1 MRVIFMGTPDFSVGTLEAIIEAGHEVALVVTQPDKPKGRGKTMQYTPVKECALSHGIEVF 60
Query: 61 QPISLK-------------------------------------------LNGKYHKIANE 77
QP+ ++ L KY A
Sbjct: 61 QPVKIRETANIEYLRKFNADIIIVVAFGQILSKSILDMPRYGCINVHASLLPKYRGAAPI 120
Query: 78 THKLLNKIEFDIMIVMG-----------------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++N EF + M + P++T +L +KL L ++T+
Sbjct: 121 QWAVINGDEFTGVTTMRMDEGVDTGDMIAKSTVRLAPDETGGSLFDKLSAEGARLCVETM 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
K IE + + PQ++ ++ +I K +DW+ A I R I NP+P A T+
Sbjct: 181 KMIEDGTAE--YTPQNSEEATHTSMISKELGFIDWTKPAVEIERLIRGLNPWPSAYTHL- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
N K F K+W A + +PG I ++ N + V GK + L+E+Q KK++
Sbjct: 238 ---NGKTF-KVWSAKVIDGSDDYEPGCIYHIG-KNDMYVQTGKGALSLVEVQLQGKKRMD 292
Query: 241 ATEFINGC 248
F+ GC
Sbjct: 293 TGSFLRGC 300
>gi|349610697|ref|ZP_08890030.1| methionyl-tRNA formyltransferase [Neisseria sp. GT4A_CT1]
gi|348609573|gb|EGY59309.1| methionyl-tRNA formyltransferase [Neisseria sp. GT4A_CT1]
Length = 308
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLAPSPVKQAALELGLRVA 60
Query: 61 QPISLK------------------------------LNGKYHKIANETHKLLNK------ 84
QP L+ L+ H N LL +
Sbjct: 61 QPEKLRNNVESLQMLKEVDADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHCYAIQPTDTANEVHDALMNLGAEAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA +DW+ SA I RKI AFNP P A +
Sbjct: 181 LQQLKAE-GRLKSVKQPEEGVTYAQKLSKEEARVDWNESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A ++ + + G +L+ + +G++V CG+N +K+ ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEVVAQQG--RAGEVLSCSA-DGLVVACGENALKITELQPSGSKRM 291
Query: 240 SATEFING 247
F G
Sbjct: 292 PIAAFAAG 299
>gi|419795977|ref|ZP_14321551.1| methionyl-tRNA formyltransferase [Neisseria sicca VK64]
gi|385699930|gb|EIG30193.1| methionyl-tRNA formyltransferase [Neisseria sicca VK64]
Length = 308
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLAPSPVKHAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMNLGAEAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA +DW+ SA I RKI AFNP P A +
Sbjct: 181 LQQLKAE-GRLKSVKQPEEGITYAQKLSKEEARIDWNESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A ++ + + G +L+ + +G++V CG+N +K+ ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEVVAQQG--RAGEVLSCSA-DGLVVACGENALKITELQPSGSKRM 291
Query: 240 SATEFING 247
F G
Sbjct: 292 PIAAFAAG 299
>gi|330999025|ref|ZP_08322750.1| methionyl-tRNA formyltransferase [Parasutterella excrementihominis
YIT 11859]
gi|329575767|gb|EGG57293.1| methionyl-tRNA formyltransferase [Parasutterella excrementihominis
YIT 11859]
Length = 324
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 87/324 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT AA L+ L SEH +V++L++PD +GRG KL S VK A +H+I +
Sbjct: 1 MRVIFAGTPEFAAKALEALIQSEHEVVMVLSQPDRPAGRGRKLKESAVKSLAKQHNIPVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIE---FDIMIVM---------------GILPE---- 98
P+SL++ K ET ++L K++ D+++V G+LP+
Sbjct: 61 TPLSLRV----EKGGEETAEVLTKMQEAKADVLVVAAYGLIVPQFVLDIPSGVLPQKFPT 116
Query: 99 -----------------------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDM 127
+T +TL L +L+ +++ D
Sbjct: 117 LKAVNIHGSLLPEWRGAAPIARAIERGDKETGITLMQMDAGLDTGPMLMKRSVEITPEDT 176
Query: 128 TKLFFKPQSNIG-----------ESYAPL-----------IKKNEAVLDWSLSAKTIMRK 165
+ S +G E+Y P+ + K E +DW+ SA I K
Sbjct: 177 AGDLTETLSRLGAEMLIEYLRNPEAYPPISQPEGATYASKLSKAEGKIDWTASADKIADK 236
Query: 166 INAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKK-PGTILNVNFHNGILVVCGKN 224
+ AFNP PG + + + + LKIW A A + T + PGT++ + GILV CG +
Sbjct: 237 VRAFNPVPGC---FCACGD--EVLKIWMAFAEPGKKTGETPGTVIESS-AKGILVACGDS 290
Query: 225 -VIKLLELQKNNKKKISATEFING 247
V+++ LQ+ K++ +FI G
Sbjct: 291 TVLRITRLQRPGGKQLDVRDFIAG 314
>gi|377819465|ref|YP_004975836.1| methionyl-tRNA formyltransferase [Burkholderia sp. YI23]
gi|357934300|gb|AET87859.1| methionyl-tRNA formyltransferase [Burkholderia sp. YI23]
Length = 323
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
IL DT+ TL ++L ++ LI+ ++ ++ D L PQ G +YA I K+EA LD
Sbjct: 167 ILAGDTTATLHDRLAQMGAELIVAALRDLQRD-GALPSTPQPEEGTTYAEKIAKHEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A+ + R++ AF+PFPGA + + +N +KIW A ++ + PGTI V+
Sbjct: 226 WRRPAQELARQVRAFDPFPGA---FGTLENTA--IKIWSAQ--PVDGSGAPGTIAEVS-P 277
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+GI V+CG+ ++L LQK K++ A EF+ G
Sbjct: 278 DGIFVMCGEGALRLTHLQKPGGKRLPAREFLAGA 311
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT AAA L ++ + ++ L+LT+PD +GRGMKL SPVK++A++H +K+
Sbjct: 5 LRVVFAGTPEFAAAALAAIHAAGFSVPLVLTQPDRPAGRGMKLTASPVKRFAVEHGLKVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY + A E LL D+M+V ILP++
Sbjct: 65 QPTSLRRAGKYPQEAAEAIDLLRDTAHDVMVVAAYGLILPQE 106
>gi|303256330|ref|ZP_07342346.1| methionyl-tRNA formyltransferase [Burkholderiales bacterium 1_1_47]
gi|302861059|gb|EFL84134.1| methionyl-tRNA formyltransferase [Burkholderiales bacterium 1_1_47]
Length = 324
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 87/324 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT AA L+ L SEH +V++L++PD +GRG KL S VK A +H+I +
Sbjct: 1 MRVIFAGTPEFAAKALEALIQSEHEVVMVLSQPDRPAGRGRKLKESAVKALAKQHNIPVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIE---FDIMIVM---------------GILPE---- 98
P+SL++ K ET ++L K++ D+++V G+LP+
Sbjct: 61 TPLSLRV----EKGGEETAEVLTKMQEAKADVLVVAAYGLIVPQFVLDIPSGVLPQKFPT 116
Query: 99 -----------------------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDM 127
+T +TL L +L+ +++ D
Sbjct: 117 LKAVNIHGSLLPEWRGAAPIARAIERGDKETGITLMQMDAGLDTGPMLMKRSVEITPEDT 176
Query: 128 TKLFFKPQSNIG-----------ESYAPL-----------IKKNEAVLDWSLSAKTIMRK 165
+ S +G E+Y P+ + K E +DW+ SA I K
Sbjct: 177 AGDLTETLSRLGAEMLIEYLRNPEAYPPISQPEGATYASKLSKAEGKIDWTASADKIADK 236
Query: 166 INAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKK-PGTILNVNFHNGILVVCGKN 224
+ AFNP PG + + + + LKIW A A + T + PGT++ + GILV CG +
Sbjct: 237 VRAFNPVPGC---FCACGD--EVLKIWMAFAEPGKKTGETPGTVIESS-AKGILVACGDS 290
Query: 225 -VIKLLELQKNNKKKISATEFING 247
V+++ LQ+ K++ +FI G
Sbjct: 291 TVLRITRLQRPGGKQLDVRDFIAG 314
>gi|134093409|ref|YP_001098484.1| methionyl-tRNA formyltransferase [Herminiimonas arsenicoxydans]
gi|166214901|sp|A4G1G8.1|FMT_HERAR RecName: Full=Methionyl-tRNA formyltransferase
gi|133737312|emb|CAL60355.1| Methionyl-tRNA formyltransferase [Herminiimonas arsenicoxydans]
Length = 317
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M++M LP +DT+ +L +KL +L +I++ + K+E +L PQ G +YA I
Sbjct: 155 MLLMESLPIAADDTTASLHDKLARLGGEMIVEALLKLEKG--ELTATPQPEAGANYAAKI 212
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
K EA LD SA+ + RKI AFNPFPGA I KF W+A AL + G
Sbjct: 213 AKEEATLDLRQSAQELARKIRAFNPFPGA--MGICNGTPVKF---WQAQALECSNQWPAG 267
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYF 255
+++ N +G+++ CG +++ ELQK K++ A EFI G + F
Sbjct: 268 QVISANAQDGVVIACGDGALRVTELQKPGGKRLPAAEFIKGFALEAQRF 316
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AA L L+ + I L+LT+PD +GRGM+L S VK++AL H I +
Sbjct: 1 MKIIFAGTPEFAAVALAALHAAGFEIPLVLTQPDRPAGRGMQLQASAVKQFALAHKIPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QPISL+L+GKY +A E H LL D+M+V ILP+
Sbjct: 61 QPISLRLDGKYPDVAQEAHDLLRATPHDVMVVAAYGLILPQ 101
>gi|298370616|ref|ZP_06981931.1| methionyl-tRNA formyltransferase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281226|gb|EFI22716.1| methionyl-tRNA formyltransferase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 308
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ + +
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLAPSPVKQAALELGLHVA 60
Query: 61 QPISLK------------------------------LNGKYHKIANETHKLLNK------ 84
QP L+ L+ H N LL +
Sbjct: 61 QPEKLRNNAEALQMLKGVDADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L L I+
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMSLGAAAIVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ + +L Q G +YA + K EA ++W+ SA I RKI AFNP P A +
Sbjct: 181 LQQLKTE-GRLKSVKQPEEGVTYAQKLSKEEARINWNESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KIW+A A++ + + G +L+ + +G++V CG+N +K+ ELQ + K++
Sbjct: 237 VEYQGKP--MKIWRAEAVAQQG--RAGEVLSCSA-DGLVVACGENALKITELQPSGSKRM 291
Query: 240 SATEFING 247
F G
Sbjct: 292 DIAAFAAG 299
>gi|167585077|ref|ZP_02377465.1| methionyl-tRNA formyltransferase [Burkholderia ubonensis Bu]
Length = 327
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 128/317 (40%), Gaps = 77/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAQTGVTLMQMDAGLDTGAMLHDARVAIAPDDTTATLHDRLAAE 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALAQLER-TGSLPATPQPADGVTYAEKIGKHEAALDWREPADVLARRVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG LK+W A + PGTI++ +G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAALKLWAAAPVDARGDAAPGTIVDAG-PDGVIVACGSGALRVTQL 296
Query: 232 QKNNKKKISATEFINGC 248
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAGA 313
>gi|115353232|ref|YP_775071.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria AMMD]
gi|122321933|sp|Q0BAT6.1|FMT_BURCM RecName: Full=Methionyl-tRNA formyltransferase
gi|115283220|gb|ABI88737.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria AMMD]
Length = 327
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIDEARVAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERD-GALPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +K+W A ++ PGTI++ G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAARGDAAPGTIVDAA-PEGVIVACGSGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|238924697|ref|YP_002938213.1| methionyl-tRNA formyltransferase [Eubacterium rectale ATCC 33656]
gi|259646032|sp|C4ZEV8.1|FMT_EUBR3 RecName: Full=Methionyl-tRNA formyltransferase
gi|238876372|gb|ACR76079.1| methionyl-tRNA formyltransferase [Eubacterium rectale ATCC 33656]
Length = 310
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 68/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT + L+ + + H + L++T+PD GRG + ++PVK+ AL H I++
Sbjct: 1 MRVIFMGTPDFSVGTLEAIIEAGHEVALVVTQPDKPKGRGKTMQYTPVKECALSHGIEVF 60
Query: 61 QPISLK-------------------------------------------LNGKYHKIANE 77
QP+ ++ L KY A
Sbjct: 61 QPVKIRETANIEYLRKFNADIIIVVAFGQILSKSILDMPRYGCINVHASLLPKYRGAAPI 120
Query: 78 THKLLNKIEFDIMIVMG-----------------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++N EF + M + P++T +L +KL L ++T+
Sbjct: 121 QWAVINGDEFTGVTTMRMDEGVDTGDMIAKSTVRLAPDETGGSLFDKLSAEGAKLCVETM 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
K IE + + PQ++ ++ +I K +DW+ A I R I NP+P A T+
Sbjct: 181 KMIEDGTAE--YTPQNSEEATHTSMISKELGFIDWTKPAVEIERLIRGLNPWPSAYTHL- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
N K F K+W A + +PG I ++ N + V GK + L+E+Q KK++
Sbjct: 238 ---NGKTF-KVWSAKVIDGSDDYEPGCIYHIG-KNDMYVQTGKGALSLVEVQLQGKKRMD 292
Query: 241 ATEFINGC 248
F+ GC
Sbjct: 293 TGSFLRGC 300
>gi|427402491|ref|ZP_18893488.1| methionyl-tRNA formyltransferase [Massilia timonae CCUG 45783]
gi|425718297|gb|EKU81244.1| methionyl-tRNA formyltransferase [Massilia timonae CCUG 45783]
Length = 315
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ +L +KL L +I+D ++K++ +L PQ + G +YA I K EA LD
Sbjct: 164 IDPLDTTGSLHDKLAALGGRMIVDALRKMQA--GELTAVPQPDEGVTYAAKIGKEEARLD 221
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
+SL A + RK+ AFNPFPGA +K W A A +E + PG +L +
Sbjct: 222 FSLPAAVLARKVRAFNPFPGANGVVDGVA-----VKFWSAEA--VEGSGAPGAVLQAD-A 273
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI+V CG+ ++L ELQK K++ A EF+ G
Sbjct: 274 GGIVVACGEGALRLNELQKPGGKRLKAAEFLKG 306
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++FAGT AA L L+ + I L+LT+PD +GRGM+L S VK+YAL H + +
Sbjct: 1 MKVVFAGTPEFAAVALRALHEAGFEIPLVLTQPDRPAGRGMQLQASSVKQYALAHGMPVA 60
Query: 61 QPISLKLNGKYHKIANE---THKLLNKIEFDIMIVMG---ILPEDT 100
QP+SL+++ + + A + H+ L I++D+M+V ILP T
Sbjct: 61 QPLSLRMDARDPERAAQARAAHEQLQSIDYDVMVVAAYGLILPRST 106
>gi|118602766|ref|YP_903981.1| methionyl-tRNA formyltransferase [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567705|gb|ABL02510.1| methionyl-tRNA formyltransferase [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 320
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 138/312 (44%), Gaps = 77/312 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT +A IL TL N++H+IV + +PD GRG L PVK+ AL+H++ I
Sbjct: 10 VRIVFAGTPEFSAGILKTLINTKHDIVGVFCQPDRPKGRGRVLTTCPVKEKALEHNLNIF 69
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM--------------------------- 93
QP +LK N K +I L K+ DIM+V
Sbjct: 70 QPENLK-NDKIQQI-------LTKLNADIMVVAAYGQILPAKILNTLKYGCLNIHSSLLP 121
Query: 94 ---GILPEDTSLTLQNK-------------------LEKLSKILIIDTIKKIEYDMTKL- 130
G P ++ +K LEK I +IDT + + + KL
Sbjct: 122 RWRGAAPIQRAILAGDKITGINIMQMNEDLDTGDILLEKTCSITLIDTAQSLHDKLAKLS 181
Query: 131 ----------------FFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ ++NI +YA +KK+EA +DW+ SA I R+I AFNP+P
Sbjct: 182 SSAIIEVLDNLDNLLPTAQRENNI--TYAAKLKKDEAWIDWTQSAIQINRQIRAFNPYPI 239
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A+TY S + K L+I A + PG+I+ N V G + L LQ +
Sbjct: 240 AQTYASSNKFDTKVLRILSASVVMTNGNYNPGSIIKHN-KKACTVATGGGALNLKTLQLS 298
Query: 235 NKKKISATEFIN 246
KK ++ +F N
Sbjct: 299 GKKALNIKDFSN 310
>gi|423204431|ref|ZP_17190987.1| methionyl-tRNA formyltransferase [Aeromonas veronii AMC34]
gi|404627296|gb|EKB24101.1| methionyl-tRNA formyltransferase [Aeromonas veronii AMC34]
Length = 314
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 138/315 (43%), Gaps = 86/315 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L +S+H +V + T+PD +GRG KL SPVK+ AL H++ +
Sbjct: 4 LKLIFAGTPDFAARHLAALLSSDHEVVAVYTQPDKPAGRGQKLTASPVKELALAHNLPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP +L+ E L + D+M+V+ ILP+
Sbjct: 64 QPATLR--------KEEAQAELAALGADLMVVVAYGLILPKAVLDTPRLGCINVHGSLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD-MTKLF 131
D L + K+S + D YD + KL
Sbjct: 116 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGAMIRKVSCPIAADETSASLYDKLAKL- 174
Query: 132 FKPQSNI--------GES-----------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
PQ+ + GE+ YA + K EA +DWS+ A I R I +FNP+
Sbjct: 175 -GPQALVDTIDAMAAGETAAEAQDDALANYAEKLSKEEARIDWSMDAVAIERCIRSFNPW 233
Query: 173 PGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
P IS+ + + +K+W+A + + + GT+L + GI + GK V++LL L
Sbjct: 234 P------ISWFEVADQTVKVWQAAVIDSDHGQPAGTLLKAD-KQGIDIATGKGVLRLLTL 286
Query: 232 QKNNKKKISATEFIN 246
Q KK +S ++ +N
Sbjct: 287 QPPGKKAMSVSDLLN 301
>gi|407693605|ref|YP_006818394.1| methionyl-tRNA formyltransferase [Actinobacillus suis H91-0380]
gi|407389662|gb|AFU20155.1| methionyl-tRNA formyltransferase [Actinobacillus suis H91-0380]
Length = 316
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 141/307 (45%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK+ A +H+I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQHNIPVY 63
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
QP SL+ LN + N LL +
Sbjct: 64 QPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAAPI 123
Query: 85 ---------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++ DI + G I ++TS +L KL +L+ +++ +
Sbjct: 124 QRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLEVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E K + Q +YA + K EA LDW+L+A + R I AFNP+P +
Sbjct: 184 NGLESQAFKA--EKQDEALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWP-ISFLTL 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+++A+ L ++ K GT+L + NGI + V+ + +LQ + KK +S
Sbjct: 241 EVDGVEQSVKVYQANVLPHQA-KVAGTVLQAD-KNGIQIATQDGVLNITQLQPSGKKPMS 298
Query: 241 ATEFING 247
+F+NG
Sbjct: 299 VQDFLNG 305
>gi|170697715|ref|ZP_02888802.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria IOP40-10]
gi|170137330|gb|EDT05571.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria IOP40-10]
Length = 327
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 129/316 (40%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARVAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERD-GALPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +K+W A ++ PGTI+ G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAARGDAAPGTIVEAA-PEGVIVACGSGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|421541456|ref|ZP_15987573.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM255]
gi|402319825|gb|EJU55329.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM255]
Length = 308
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 141/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + T G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRADVVAQQGTA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|390569585|ref|ZP_10249870.1| methionyl-tRNA formyltransferase [Burkholderia terrae BS001]
gi|389938445|gb|EIN00289.1| methionyl-tRNA formyltransferase [Burkholderia terrae BS001]
Length = 327
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL ++L + LI+D + ++E KL PQ + G +YA I K+EA LDW
Sbjct: 171 DTTATLHDRLAEAGAKLIVDALIELERS-GKLAATPQPDDGATYAEKIGKHEAALDWRRP 229
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R++ AF+PFPG LKIW A + S +PGTI++V+ +G++
Sbjct: 230 AAELARQVRAFDPFPGGAATL-----DGSVLKIWSAAPIETPSRAEPGTIVDVS-PDGVV 283
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG +++ +LQK K++ +F+ G
Sbjct: 284 VACGDGALRITQLQKPGGKRLPVRDFLAG 312
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL SPVK+YA +H I++
Sbjct: 5 LRVIFAGTPEFAAAALAAIHAAAFPVPLVLTQPDRPAGRGMKLQASPVKRYAQEHGIEVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ NGK+ A L D+M+V +LP++
Sbjct: 65 QPPSLRRNGKFPAEATAAIDQLRATPHDVMVVAAYGLLLPQE 106
>gi|375257648|ref|YP_005016818.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca KCTC 1686]
gi|365907126|gb|AEX02579.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca KCTC 1686]
Length = 315
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 133/314 (42%), Gaps = 84/314 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP SL+ E +L++ + D+M+V+ +LP
Sbjct: 65 QPASLR--------PQENQQLVSDLRADVMVVVAYGLLLPKAVLDMPRLGCINVHGSLLP 116
Query: 98 E-------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD-MTKLF 131
D L + L KL+ + + YD + KL
Sbjct: 117 RWRGAAPIQRSLWAGDTETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGTLYDKLAKL- 175
Query: 132 FKPQS------NIGESYAPLIKKNEAVL-------------DWSLSAKTIMRKINAFNPF 172
PQ + A + ++EA++ DWSL A + R I AFNP+
Sbjct: 176 -GPQGLIDTLKQLAAGTAKPVVQDEALVTHAQKLSKEEARIDWSLPAAQLERCIRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P +I + +K+W+A + + +T +PGTI+ GI V V+ LL LQ
Sbjct: 235 P---MSWIEIDGQP--VKVWQASVIDVATTAEPGTIIEAT-KQGIQVATSDGVLNLLSLQ 288
Query: 233 KNNKKKISATEFIN 246
KK +SA + +N
Sbjct: 289 PAGKKAMSAQDLLN 302
>gi|241664930|ref|YP_002983290.1| methionyl-tRNA formyltransferase [Ralstonia pickettii 12D]
gi|240866957|gb|ACS64618.1| methionyl-tRNA formyltransferase [Ralstonia pickettii 12D]
Length = 327
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKI-EYDMTKLFFKPQSNIGESYAPL 145
MI M +P DT+ TL + L L ++++ + K+ +Y KL PQ G +YA
Sbjct: 160 MIAMERVPIGLTDTTGTLHDTLAALGGRMVVEALAKLAQYG--KLHATPQPAEGITYAEK 217
Query: 146 IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-K 204
I K+EA LDWS A ++R+++AFNPFPGA +K W+A AL+ + +
Sbjct: 218 IAKDEAALDWSRHAAALLRQVHAFNPFPGASAALDGVA-----IKFWQAEALADRPAEAE 272
Query: 205 PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYFIS 257
PGT+L N G+ + CG +++ +LQK K++ A EF+ G I+ + F S
Sbjct: 273 PGTVLAAN-AEGVTIACGAGALRVTQLQKPGGKRLPAREFLQGLAIQPGQRFAS 325
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM+L SPVK+YA+ H I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGFPVVAVLSQPDRPAGRGMQLQASPVKQYAVTHGFAPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A E L D+M+V ILP++
Sbjct: 65 LQPPSLRRAGKYPQEAAEVIDALAAQRPDVMVVAAYGLILPQE 107
>gi|83748631|ref|ZP_00945649.1| Methionyl-tRNA formyltransferase [Ralstonia solanacearum UW551]
gi|207741951|ref|YP_002258343.1| methionyl-trna formyltransferase protein [Ralstonia solanacearum
IPO1609]
gi|83724675|gb|EAP71835.1| Methionyl-tRNA formyltransferase [Ralstonia solanacearum UW551]
gi|206593337|emb|CAQ60264.1| methionyl-trna formyltransferase protein [Ralstonia solanacearum
IPO1609]
Length = 327
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + ++ D +L PQ G +YA I
Sbjct: 160 MITMEHVPIGLTDTTGTLHDTLAALGGRMVVEALARLAQD-GRLPATPQPAEGVTYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K+EA LDWS + ++R+++AFNPFPGA S + +K W+A AL + +P
Sbjct: 219 AKDEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVTIKFWQATALPDRPADAEP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYFIS 257
GT+L + +G+++ CG +++ +LQK K++ A EF+ G ++ + F S
Sbjct: 274 GTVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLAVRPGQRFAS 325
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM L SPVK+Y + H + I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGFPLVAVLSQPDRPAGRGMHLQASPVKQYGISHGLGPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A E L+ D+M+V ILP++
Sbjct: 65 LQPPSLRRAGKYPQEAAEAIDALSAQRPDVMVVAAYGLILPQE 107
>gi|134297375|ref|YP_001121110.1| methionyl-tRNA formyltransferase [Burkholderia vietnamiensis G4]
gi|166214883|sp|A4JJ22.1|FMT_BURVG RecName: Full=Methionyl-tRNA formyltransferase
gi|134140532|gb|ABO56275.1| methionyl-tRNA formyltransferase [Burkholderia vietnamiensis G4]
Length = 327
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K + + I L L H +
Sbjct: 65 QPPSLRRAGKFPAEAAEAIEL-LRATPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIDEARIAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+ ++++E D L PQ G +YA I K+EA LDW +A + R++ AF+P
Sbjct: 184 GARLIVAALERLERD-GALPATPQPADGVTYAEKIGKHEAALDWRKAADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +K+W A ++ PGTI+ G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAARGDAAPGTIVEAA-PEGVIVACGAGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|270264341|ref|ZP_06192607.1| methionyl-tRNA formyltransferase [Serratia odorifera 4Rx13]
gi|270041477|gb|EFA14575.1| methionyl-tRNA formyltransferase [Serratia odorifera 4Rx13]
Length = 314
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 136/314 (43%), Gaps = 84/314 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H IV + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHQLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ H +A+ + D+M+V+ ILP+
Sbjct: 65 QPKSLRPEENQHLVAD--------LNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD-MTKLF 131
D L + + K++ + D YD + KL
Sbjct: 117 RWRGAAPIQRSLWAGDNETGVTIMQMDVGLDTGDMMHKIACPIEADDTSATLYDKLAKL- 175
Query: 132 FKPQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPF 172
PQ + E A ++EA+ LDWSLSA + R I AFNP+
Sbjct: 176 -GPQGMLTTLLQMAEGTAQREVQDEALVTYAEKLSKEEARLDWSLSAVQLERCIRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P Y + ++ +K+W+A L+ +PGTI++ + H GI + ++ L +LQ
Sbjct: 235 P---VSYFTIDDQP--VKVWQATVLADTPGAEPGTIIHADKH-GIQIATADGILNLTQLQ 288
Query: 233 KNNKKKISATEFIN 246
KK +SA + +N
Sbjct: 289 PAGKKPMSAQDLLN 302
>gi|309780264|ref|ZP_07675015.1| methionyl-tRNA formyltransferase [Ralstonia sp. 5_7_47FAA]
gi|404394864|ref|ZP_10986667.1| methionyl-tRNA formyltransferase [Ralstonia sp. 5_2_56FAA]
gi|308920967|gb|EFP66613.1| methionyl-tRNA formyltransferase [Ralstonia sp. 5_7_47FAA]
gi|348613928|gb|EGY63497.1| methionyl-tRNA formyltransferase [Ralstonia sp. 5_2_56FAA]
Length = 327
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKI-EYDMTKLFFKPQSNIGESYAPL 145
MI M +P DT+ TL + L L ++++ + K+ +Y KL PQ G +YA
Sbjct: 160 MIAMERVPIGLTDTTGTLHDTLAALGGRMVVEALAKLAQYG--KLHATPQPAEGITYAEK 217
Query: 146 IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-K 204
I K+EA LDWS A ++R+++AFNPFPGA +K W+A AL+ + +
Sbjct: 218 IAKDEAALDWSRHAAALLRQVHAFNPFPGASAALDGVA-----IKFWQAEALADRPAEAE 272
Query: 205 PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYFIS 257
PGT+L N G+ + CG +++ +LQK K++ A EF+ G I+ + F S
Sbjct: 273 PGTVLAAN-AEGVTIACGAGALRVTQLQKPGGKRLPAREFLQGLAIQPGQRFAS 325
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM+L SPVK+YA+ H I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHRTGFPVVAVLSQPDRPAGRGMQLQASPVKQYAVTHGFAPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A E L D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAEAIDALAAQRPDVMVVAAYGLILPQE 107
>gi|156972727|ref|YP_001443634.1| methionyl-tRNA formyltransferase [Vibrio harveyi ATCC BAA-1116]
gi|444428411|ref|ZP_21223744.1| methionyl-tRNA formyltransferase [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|166215597|sp|A7N122.1|FMT_VIBHB RecName: Full=Methionyl-tRNA formyltransferase
gi|156524321|gb|ABU69407.1| hypothetical protein VIBHAR_00392 [Vibrio harveyi ATCC BAA-1116]
gi|444238360|gb|ELU49970.1| methionyl-tRNA formyltransferase [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 315
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I K Q + +YA + K EA +DW+ A I R + AFNP+P +++
Sbjct: 185 ADIAAGKAKPV--KQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTIL + GI VV G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVEEQTSDKPAGTILQAD-KTGIYVVTGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|156315058|ref|XP_001617930.1| hypothetical protein NEMVEDRAFT_v1g156333 [Nematostella vectensis]
gi|156196541|gb|EDO25830.1| predicted protein [Nematostella vectensis]
Length = 323
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 78/315 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS---- 56
+KIIFAGT + +L + N++ N+ L+LT+PD + RG K+ SPVK+ ALKH
Sbjct: 5 LKIIFAGTPGISETVLKNILNNKFNVELVLTQPDRPANRGKKITQSPVKELALKHDIEVI 64
Query: 57 --------------IKIIQP--------------------------ISLKLNGKYHK--- 73
IK +QP I + L KY
Sbjct: 65 QPELVKNNHELFARIKHLQPDIMVVVAYGLILPQELLDIPKLGCINIHVSLLPKYRGAAP 124
Query: 74 -----IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
+ANE + I+ D + G I +TS TL +KL L ++I+D
Sbjct: 125 IQRAILANEKVTGVTIIKMDSGMDTGDILMQQELKIESTETSGTLHDKLANLGALMIVDY 184
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ E K Q + SYAP I+K EA ++W+ + I RKI FNP PG T+
Sbjct: 185 LANHE----NYPVKKQDEVNVSYAPKIEKKEAHINWNEDSHIIERKIRGFNPVPGCFTFL 240
Query: 180 ISYQNKKKFLKIWKAHALSIESTK------KPGTILNVNFHNGILVVCGKNVIKLL-ELQ 232
+ +KIW+A ++ ++ KPGTI+N+ G++V+CG N + L+ +LQ
Sbjct: 241 -----DESLIKIWQADSIDNKNKDYLSIGIKPGTIVNIT-GVGLIVLCGNNSLLLITKLQ 294
Query: 233 KNNKKKISATEFING 247
KK SA ++++G
Sbjct: 295 VAGKKAQSAKDYVHG 309
>gi|170734475|ref|YP_001766422.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia MC0-3]
gi|238688624|sp|B1K0J5.1|FMT_BURCC RecName: Full=Methionyl-tRNA formyltransferase
gi|169817717|gb|ACA92300.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia MC0-3]
Length = 330
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 132/319 (41%), Gaps = 80/319 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHKAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARIAIAPDDTTATLHDRLAAA 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERDGT-LPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIE---STKKPGTILNVNFHNGILVVCGKNVIKL 228
FPG +K+W A ++ +T PGTI+ G++V CG +++
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAAHGTIATAAPGTIVEAA-PEGVVVACGSGALRV 296
Query: 229 LELQKNNKKKISATEFING 247
+LQK K++ A EF+ G
Sbjct: 297 TQLQKPGGKRLPAREFLAG 315
>gi|392540118|ref|ZP_10287255.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas marina mano4]
Length = 317
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 141/313 (45%), Gaps = 82/313 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L NSEH IV + ++PD +GRG KL S VK AL++ + +
Sbjct: 5 LRIIFAGTPDFAARHLQALINSEHEIVGVYSQPDRPAGRGKKLKASEVKALALENDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP SLK +E L + DIMIV+ ILP
Sbjct: 65 QPQSLK--------NDEALAELTALNADIMIVVAYGLILPKAILNAPRLGCLNVHGSILP 116
Query: 98 ----------------EDTSLTLQNKLEKL--------SKILIIDTI-------KKIEYD 126
E+T +T+ E L S+ I DT K E
Sbjct: 117 RWRGAAPIQRAIWAGDEETGVTIMQMDEGLDTGDMLHISRCPISDTETSASLYNKLAELG 176
Query: 127 MTKLF----------FKPQSNIGE--SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ L PQ E +YA + K EA +DWS+SA I I +FNP+P
Sbjct: 177 PSALIDTVNKLANGDITPQPQNDELANYAKKLSKEEANIDWSMSAVQIELNIRSFNPWPV 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
T Q ++ +KI++A ++ + KPG IL + NG++V CG++ + + +LQ
Sbjct: 237 CFT-----QMGEQTVKIYQAKV--VDQSGKPGEILTSD-KNGVVVACGEHALSITQLQPQ 288
Query: 235 NKKKISATEFING 247
KK ++ ++F+NG
Sbjct: 289 GKKPMAISDFLNG 301
>gi|421537900|ref|ZP_15984082.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 93003]
gi|402317937|gb|EJU53464.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 93003]
Length = 308
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 141/309 (45%), Gaps = 72/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEY-DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+++++ D +P+ + +YA + K EA +DWS SA I RKI AFNP P A
Sbjct: 181 LQQLQSKDRLNAVKQPEEGV--TYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA--- 235
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
++ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ ++
Sbjct: 236 WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRR 290
Query: 239 ISATEFING 247
++ F G
Sbjct: 291 MNIAAFAAG 299
>gi|56477099|ref|YP_158688.1| methionyl-tRNA formyltransferase [Aromatoleum aromaticum EbN1]
gi|73919372|sp|Q5P4H6.1|FMT_AZOSE RecName: Full=Methionyl-tRNA formyltransferase
gi|56313142|emb|CAI07787.1| methionyl-tRNA formyltransferase [Aromatoleum aromaticum EbN1]
Length = 316
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ L ++L L +I++ ++++ +L PQ G +YA I K EAV+D
Sbjct: 160 IGPADTTGALHDRLAALGAQMIVEALRRLPSG--ELVAMPQPAEGATYAGKIGKAEAVID 217
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A ++ R + AFNPFPGA ++ LKIW A + +PGT+L V
Sbjct: 218 WQCDASSVARAVRAFNPFPGAVASL-----RQVPLKIWFAE--PVAGHGEPGTVL-VADA 269
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+GI+V CG ++L +LQK ++++A EF+ G
Sbjct: 270 DGIVVACGTQAVRLAQLQKPGSRRLAAGEFLRG 302
>gi|300705524|ref|YP_003747127.1| 10-formyltetrahydrofolate:l-methionyl-tRNA(fmet)
N-formyltransferase [Ralstonia solanacearum CFBP2957]
gi|299073188|emb|CBJ44546.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum CFBP2957]
Length = 327
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + ++ D +L PQ G +YA I
Sbjct: 160 MITMEHVPIGLTDTTGTLHDTLAALGGRMVVEALARLAQD-GRLPAAPQPAEGVTYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K EA LDWS + ++R+++AFNPFPGA S + +K W+A AL + +P
Sbjct: 219 AKEEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVTIKFWQATALPDRPADAEP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYFIS 257
GT+L + +G+++ CG +++ +LQK K++ A EF+ G ++ + F S
Sbjct: 274 GTVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLAVRPGQRFAS 325
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
++I FAGT A L ++ + +V +L++PD +GRGM L SPVK+YA+ H + I
Sbjct: 5 LRIAFAGTPEFAQIALAAIHQAGFPLVAVLSQPDRPAGRGMHLQASPVKQYAISHGLGPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A E L+ D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAEAIDALSAQRPDVMVVAAYGLILPQE 107
>gi|237801647|ref|ZP_04590108.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024506|gb|EGI04562.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 314
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 135/307 (43%), Gaps = 72/307 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +S H IV + T+PD +GRG KL SPVK+ AL+H I ++
Sbjct: 5 LRIVFAGTPEFAAEHLKALLDSAHQIVAVYTQPDRPAGRGQKLMPSPVKQLALQHDIPVM 64
Query: 61 QPISLKLNGKYHKIANETHKL---------LNKIEFDI---------------------- 89
QP +L+ ++A + L L ++ DI
Sbjct: 65 QPPTLRDPAAQAELAALSPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAPI 124
Query: 90 --------------------------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
M++ + P +DT TL ++L +L ++ I
Sbjct: 125 QRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQAI 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ L + Q + +YA + K+EA +DWS A + R + AFNP+P I
Sbjct: 185 SGLAEG--SLIGEVQDDSLANYAHKLNKDEARIDWSRPADELERLVRAFNPWP------I 236
Query: 181 SYQN-KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ ++ LK+ A E PGTIL+ + G++V CG+N ++L LQ K +
Sbjct: 237 CHSTLNEETLKVLAADL--AEGRGAPGTILSAS-KEGLIVACGQNALRLTRLQLPGGKPL 293
Query: 240 SATEFIN 246
+ T+ N
Sbjct: 294 NFTDLFN 300
>gi|407711814|ref|YP_006832379.1| methionyl-tRNA formyltransferase [Burkholderia phenoliruptrix
BR3459a]
gi|407233998|gb|AFT84197.1| methionyl-tRNA formyltransferase [Burkholderia phenoliruptrix
BR3459a]
Length = 328
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ +L ++L + LI++ + ++E KL PQ G +YA I K+EA LDW
Sbjct: 170 DDTTASLHDRLAQDGAKLIVEALVELERS-GKLSATPQPADGVTYAEKIGKHEAALDWRR 228
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AF+PFPG ++ +KIW A A +ST PGT+++V+ G+
Sbjct: 229 PAAALARQVRAFDPFPGG----MATLEDGTAIKIWAASAEDAKSTAAPGTLISVS-PEGV 283
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
LV CG+ ++L +LQK K++ EF+ G
Sbjct: 284 LVACGEGALRLTQLQKPGGKRLPVREFLAG 313
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT A+A L ++ + + L+LT+PD +GRGMKL SPVK+Y ++H + +
Sbjct: 5 LRVVFAGTPEFASAALAAIHGAGFPVPLVLTQPDRPAGRGMKLQASPVKRYTVEHGLAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY A + L D+M+V ILP++
Sbjct: 65 QPPSLRRAGKYPAEAAAAIEQLRATPHDVMVVAAYGLILPQE 106
>gi|107024057|ref|YP_622384.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia AU 1054]
gi|116691144|ref|YP_836767.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia HI2424]
gi|122978611|sp|Q1BSJ4.1|FMT_BURCA RecName: Full=Methionyl-tRNA formyltransferase
gi|166214880|sp|A0KBJ7.1|FMT_BURCH RecName: Full=Methionyl-tRNA formyltransferase
gi|105894246|gb|ABF77411.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia AU 1054]
gi|116649233|gb|ABK09874.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia HI2424]
Length = 330
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 132/319 (41%), Gaps = 80/319 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHKAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARIAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERDGT-LPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIEST---KKPGTILNVNFHNGILVVCGKNVIKL 228
FPG +K+W A ++ + T PGTI+ G++V CG +++
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVATDGTIASAAPGTIVEAA-PEGVVVACGSGALRV 296
Query: 229 LELQKNNKKKISATEFING 247
+LQK K++ A EF+ G
Sbjct: 297 TQLQKPGGKRLPAREFLAG 315
>gi|421891363|ref|ZP_16322168.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum K60-1]
gi|378963311|emb|CCF98916.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum K60-1]
Length = 327
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + ++ D +L PQ G +YA I
Sbjct: 160 MITMEHVPIGLTDTTGTLHDTLAALGGRMVVEALARLAQD-GRLPATPQPAEGVTYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K EA LDWS + ++R+++AFNPFPGA S + +K W+A AL + +P
Sbjct: 219 AKEEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVTIKFWQATALPDRPADAEP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYFIS 257
GT+L + +G+++ CG +++ +LQK K++ A EF+ G ++ + F S
Sbjct: 274 GTVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLAVRPGQRFAS 325
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM L SPVK+YA+ H + I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGFPLVAVLSQPDRPAGRGMHLQASPVKQYAISHGLGPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A E L+ D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAEAIDALSVQRPDVMVVAAYGLILPQE 107
>gi|344173220|emb|CCA88361.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia syzygii R24]
Length = 327
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + ++ L PQ G +YA I
Sbjct: 160 MIAMEHVPIGLTDTTGTLHDTLAALGGRMVVEALARLAQH-GGLPATPQPAEGVTYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-KP 205
K EA LDWS + ++R+++AFNPFPGA S + LK W+A AL T +P
Sbjct: 219 AKEEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVALKFWQAEALPDRPTDVQP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGC-IKNIKYFIS 257
GT+L + +G+++ CG +++ +LQK K++ A EF+ G I++ + F S
Sbjct: 274 GTVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLPIRSGQRFAS 325
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM L SPVK+YA+ H + I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGLPVVAVLSQPDRPAGRGMHLQASPVKQYAVSHGLGPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A + L+ D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAAAIEALSAQRPDVMVVAAYGLILPQE 107
>gi|172062104|ref|YP_001809756.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria MC40-6]
gi|238689146|sp|B1YPX6.1|FMT_BURA4 RecName: Full=Methionyl-tRNA formyltransferase
gi|171994621|gb|ACB65540.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria MC40-6]
Length = 327
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL ++L LI+D + ++E D L PQ G +YA I K+EA LD
Sbjct: 167 IAPDDTTATLHDRLAADGARLIVDALVRLERD-GALPATPQPADGVTYAEKIGKHEAALD 225
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AF+PFPG +K+W A ++ PGTI++
Sbjct: 226 WRKPADVLARQVRAFDPFPGGVATL-----DGAAIKLWAAEPVAARGDAVPGTIVDAA-P 279
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G++V CG +++ +LQK K++ A EF+ G
Sbjct: 280 EGVIVACGSGALRVTQLQKPGGKRLPAREFLAG 312
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YA++H I +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGIPVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY A + +LL D+M+V +LP++
Sbjct: 65 QPPSLRRAGKYPGEAADAIELLRTTPHDVMVVAAYGLLLPQE 106
>gi|187930740|ref|YP_001901227.1| methionyl-tRNA formyltransferase [Ralstonia pickettii 12J]
gi|238689528|sp|B2U795.1|FMT_RALPJ RecName: Full=Methionyl-tRNA formyltransferase
gi|187727630|gb|ACD28795.1| methionyl-tRNA formyltransferase [Ralstonia pickettii 12J]
Length = 327
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + K+ D KL PQ G +YA I
Sbjct: 160 MIAMERVPIGLTDTTGTLHDTLAALGGRMVVEALAKLAQD-GKLHATPQPAEGITYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-KP 205
K+EA LDWS A ++R+++AFNPFPGA +K W+A L+ + +P
Sbjct: 219 AKDEAALDWSRHAAALLRQVHAFNPFPGASAALDGVA-----IKFWQAEVLADRPAEAEP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYFIS 257
G +L N G+ + CG +++ +LQK K++ A EF+ G I+ + F S
Sbjct: 274 GVVLAAN-AEGVTIACGAGALRVTQLQKPGGKRLPAREFLQGLAIQPGQRFAS 325
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM+L SPV +YA+ H I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGFPVVAVLSQPDRPAGRGMQLQASPVTQYAVTHGFAPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A E L D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAEAIDALTAQRPDVMVVAAYGLILPQE 107
>gi|317049807|ref|YP_004117455.1| methionyl-tRNA formyltransferase [Pantoea sp. At-9b]
gi|316951424|gb|ADU70899.1| methionyl-tRNA formyltransferase [Pantoea sp. At-9b]
Length = 314
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 81/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA LD L SEH +V + T+PD +GRG KL SPVK A H + +
Sbjct: 5 LKIIFAGTPDFAARHLDALLASEHQVVGVFTQPDRPAGRGNKLTPSPVKVLAQAHDVPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SLK + +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPKSLK--------PEDNQQLVAALQADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD-MTKL- 130
D L + L KL+ + YD + +L
Sbjct: 117 RWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLHKLACPITQQDTSATLYDKLAQLG 176
Query: 131 ---FFKPQSNIGESYAPLIKKNEAVL-------------DWSLSAKTIMRKINAFNPFPG 174
K + A K++EA++ DW+LSA + R I AFNP+P
Sbjct: 177 PEGMLKTLEQLATGSAQPEKQDEALVSYAEKLSKEEARLDWTLSAAQLERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+Y++ + +K+W+A L ++ K+PG IL+ + GI + V+ LL LQ
Sbjct: 236 -MSYFMV---DDQPVKVWQASVLPHQA-KQPGEILHAD-KQGIQIATADGVLNLLSLQPA 289
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 290 GKKAMSAQDLLN 301
>gi|421899591|ref|ZP_16329954.1| methionyl-trna formyltransferase protein [Ralstonia solanacearum
MolK2]
gi|206590797|emb|CAQ56409.1| methionyl-trna formyltransferase protein [Ralstonia solanacearum
MolK2]
Length = 283
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + ++ D +L PQ G +YA I
Sbjct: 116 MITMEHVPIGLTDTTGTLHDTLAALGGRMVVEALARLAQD-GRLPATPQPAEGVTYAEKI 174
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K EA LDWS + ++R+++AFNPFPGA S + +K W+A AL + +P
Sbjct: 175 AKEEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVTIKFWQATALPDRPADAEP 229
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYFIS 257
GT+L + +G+++ CG +++ +LQK K++ A EF+ G ++ + F S
Sbjct: 230 GTVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLAVRPGQRFAS 281
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 41 MKLNFSPVKKYALKHSI-KIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---IL 96
M L SPVK+YA+ H + I+QP SL+ GKY + A E L+ D+M+V IL
Sbjct: 1 MHLQASPVKQYAISHGLGPILQPPSLRRAGKYPQEAAEAIDALSAQRPDVMVVAAYGLIL 60
Query: 97 PED 99
P++
Sbjct: 61 PQE 63
>gi|291619143|ref|YP_003521885.1| Fmt [Pantoea ananatis LMG 20103]
gi|291154173|gb|ADD78757.1| Fmt [Pantoea ananatis LMG 20103]
Length = 314
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 138/318 (43%), Gaps = 93/318 (29%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA LD L SEH IV + T+PD +GRG KL SPVK A H+I +
Sbjct: 5 LKIIFAGTPDFAARHLDALLASEHQIVGVFTQPDRPAGRGNKLTASPVKSLAQAHNIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPQSLR--------PAENQQLVADLQADVMVVVAYGLILPKTVLEMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KL+ + + YD
Sbjct: 117 RWRGAAPIQRALWAGDSETGVTIMQMDVGLDTGDMLLKLACPISAEDTSATLYDKLADLG 176
Query: 127 ----MTKLFFKPQSNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAF 169
MT L S + + A ++++E++ L+W+LSA+ + R I AF
Sbjct: 177 PAGLMTTL-----SQLRDGNAQAVQQDESLANYAEKLSKEEARLNWTLSAEQLERCIRAF 231
Query: 170 NPFPGAKTYYIS-YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKL 228
NP+P IS + + +K+W+A L K+PG I+ + H GI + V+ L
Sbjct: 232 NPWP------ISFFMVNDQPVKVWQASVLP-HVNKQPGEIIQADKH-GIHIATADGVLNL 283
Query: 229 LELQKNNKKKISATEFIN 246
L+LQ KK +SA + +N
Sbjct: 284 LQLQPAGKKTMSAQDLLN 301
>gi|254246864|ref|ZP_04940185.1| Methionyl-tRNA formyltransferase [Burkholderia cenocepacia PC184]
gi|124871640|gb|EAY63356.1| Methionyl-tRNA formyltransferase [Burkholderia cenocepacia PC184]
Length = 330
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 132/319 (41%), Gaps = 80/319 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMAVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARLPIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERDGT-LPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIE---STKKPGTILNVNFHNGILVVCGKNVIKL 228
FPG +K+W A ++ +T PGTI+ G++V CG +++
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAAHGTIATAAPGTIVEAA-PEGVVVACGSGALRV 296
Query: 229 LELQKNNKKKISATEFING 247
+LQK K++ A EF+ G
Sbjct: 297 TQLQKPGGKRLPAREFLAG 315
>gi|206558868|ref|YP_002229628.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia J2315]
gi|444360687|ref|ZP_21161874.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia BC7]
gi|444373418|ref|ZP_21172783.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia
K56-2Valvano]
gi|238693075|sp|B4E7V8.1|FMT_BURCJ RecName: Full=Methionyl-tRNA formyltransferase
gi|198034905|emb|CAR50777.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia J2315]
gi|443591766|gb|ELT60632.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia
K56-2Valvano]
gi|443599590|gb|ELT67855.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia BC7]
Length = 330
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 131/319 (41%), Gaps = 80/319 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMTVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTQHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARIAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERDGT-LPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIEST---KKPGTILNVNFHNGILVVCGKNVIKL 228
FPG +K+W A ++ T PGTI+ G++V CG +++
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAARGTMANAAPGTIVEAA-PEGVVVACGSGALRV 296
Query: 229 LELQKNNKKKISATEFING 247
+LQK K++ A EF+ G
Sbjct: 297 TQLQKPGGKRLPAREFLAG 315
>gi|224369792|ref|YP_002603956.1| hypothetical protein HRM2_27000 [Desulfobacterium autotrophicum
HRM2]
gi|223692509|gb|ACN15792.1| Fmt [Desulfobacterium autotrophicum HRM2]
Length = 314
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 68/306 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + L L + H I+L++T+PD GRG K+ PVK A + +++IQ
Sbjct: 6 KIVFMGTPDFSVPPLLALAKAGHEILLVITQPDRPKGRGKKMVPPPVKVAAQELGLRVIQ 65
Query: 62 PISLKLNGK-----------------YHKIANE------------------THK------ 80
P + G HK++ + H+
Sbjct: 66 PEKMGTPGIKETLLALKPDLFVVVAFGHKLSQDILDIPAINPINIHASLLPAHRGSSPIQ 125
Query: 81 --LLNK--------------IEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTIK 121
LLN+ ++ M++ + P DT+ L ++L + LI+ T+
Sbjct: 126 AALLNQDQETGVTTMFMDKNLDTGDMLLRSVTPIQVSDTAQDLHDRLSAMGADLIVKTLD 185
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+ D +L PQ + ++AP++KK++ +DW+LS + I + A P+PGA T+
Sbjct: 186 ALADD--QLTPIPQDHALATHAPMLKKSDGRIDWTLSPEKISAHVRAMTPWPGAFTHL-- 241
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++ LKI++ + + +PGT+L+ + GILV G + ++ELQ + K+++A
Sbjct: 242 --NGQR-LKIFRVTCHTTPTRAEPGTVLDCD-DQGILVAAGNGTVSIVELQGASGKRLTA 297
Query: 242 TEFING 247
+F+ G
Sbjct: 298 ADFLRG 303
>gi|421543513|ref|ZP_15989604.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM140]
gi|421545573|ref|ZP_15991633.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM183]
gi|421547642|ref|ZP_15993674.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2781]
gi|421551849|ref|ZP_15997831.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM576]
gi|402325801|gb|EJU61208.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM183]
gi|402326355|gb|EJU61757.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM140]
gi|402327662|gb|EJU63049.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2781]
gi|402333117|gb|EJU68432.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM576]
Length = 308
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|381157105|ref|ZP_09866339.1| methionyl-tRNA formyltransferase [Thiorhodovibrio sp. 970]
gi|380880968|gb|EIC23058.1| methionyl-tRNA formyltransferase [Thiorhodovibrio sp. 970]
Length = 313
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 136/302 (45%), Gaps = 64/302 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
++FAGT A L L + + I + T+PD +GRG K SPVK+ AL + + QP
Sbjct: 8 LLFAGTPEFAVPALKALLAAGYPIAAVYTQPDRPAGRGRKPQPSPVKQAALDAGLAVEQP 67
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKLEKLSK------- 113
+LK ++++ +L+ I + +++ +L P L + L +
Sbjct: 68 ETLKDQAVRERLSDYGAQLMVVIAYGLLLPSAVLAAPRLGCLNIHASLLPRWRGAAPIQR 127
Query: 114 -ILIIDTIKKIE-------YDMTKLFFKPQSNIGES------------------------ 141
IL D+ +E D +F + +++IG +
Sbjct: 128 AILAGDSRTGVELMQMERGLDTGPIFARRETDIGPTETGRSLHDRLATLGAELLIDTLPA 187
Query: 142 -----------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
YA + K+EA++DW+ SA I R+I AFNP+P A+T Q
Sbjct: 188 ILAEQIVPQPQPQEGACYAHKLTKDEALIDWTQSAAEIDRRIRAFNPWPVAQT-----QL 242
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
++ +++W A + S + PG +L+ + +GILV G +++ ELQ K+ +SA +F
Sbjct: 243 GEETIRLWAAAPDAHNSPEPPGAVLSAD-KSGILVATGDGALRIGELQPPGKRAMSAADF 301
Query: 245 IN 246
+N
Sbjct: 302 LN 303
>gi|421564383|ref|ZP_16010182.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3081]
gi|402345980|gb|EJU81084.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3081]
Length = 308
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|407685820|ref|YP_006800993.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407289200|gb|AFT93512.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 316
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 62/303 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L SEH ++ + T+PD +GRG KL SPVK A +++I +
Sbjct: 5 LKVIFAGTPDFAAKHLSALLESEHEVIAVYTQPDRPAGRGKKLTASPVKVLAEENAIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMI--------------VMG-ILPE------- 98
QP SLK ++A+ L+ + + +++ V G ILP+
Sbjct: 65 QPQSLKAQDAQEELASLNADLMVVVAYGLILPTSVLNAPKLGCINVHGSILPKWRGAAPI 124
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
+T +T+ E L +L I T+ D + ++ + +G
Sbjct: 125 QRSIWAGDAETGVTIMQMDEGLDTGDMLHIATLPITSEDTSATLYEKLAELGPQALVEVV 184
Query: 141 ----------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
+YA + K EA+++W+ A+ I R I AFNP+P A Q
Sbjct: 185 NEFDRYTPTKQDDSQATYAKKLSKEEALINWADDAEQIERNIRAFNPWPVAW-----MQV 239
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+ + +K+W A + + PGT+++ N GI + G++ + + LQ KK + A++
Sbjct: 240 EDQNVKVWSASVVPLNKGATPGTVISAN-KEGITIATGRDALCITSLQIPGKKALPASDV 298
Query: 245 ING 247
IN
Sbjct: 299 INA 301
>gi|421865398|ref|ZP_16297076.1| Methionyl-tRNA formyltransferase [Burkholderia cenocepacia H111]
gi|358074616|emb|CCE47954.1| Methionyl-tRNA formyltransferase [Burkholderia cenocepacia H111]
Length = 330
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 131/319 (41%), Gaps = 80/319 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMTVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D+ + G I P+DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARIAIAPDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D T L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVRLERDGT-LPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIEST---KKPGTILNVNFHNGILVVCGKNVIKL 228
FPG +K+W A ++ T PGTI+ G++V CG +++
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAARGTMANAAPGTIVEAA-PEGVVVACGSGALRV 296
Query: 229 LELQKNNKKKISATEFING 247
+LQK K++ A EF+ G
Sbjct: 297 TQLQKPGGKRLPAREFLAG 315
>gi|416181155|ref|ZP_11611510.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M13399]
gi|325135220|gb|EGC57845.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M13399]
Length = 308
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + T G +L+ + +G++V CG+N +K+ ELQ K++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGTA--GEVLSCSA-DGLVVACGENALKITELQPAGGKRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|78043011|ref|YP_360315.1| methionyl-tRNA formyltransferase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123743169|sp|Q3AC19.1|FMT_CARHZ RecName: Full=Methionyl-tRNA formyltransferase
gi|77995126|gb|ABB14025.1| methionyl-tRNA formyltransferase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 308
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 144/309 (46%), Gaps = 74/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I++ GT A L L S H + L++TKPD +GRG K+ SPVK +A ++ +++I
Sbjct: 1 MRIVYMGTPEFAVKPLAKLI-SHHEVALVVTKPDAAAGRGKKVISSPVKLFAQENHLRVI 59
Query: 61 QPISLKLN--------------------GK-----------------------YHKIANE 77
P LK N GK +++ A
Sbjct: 60 TP--LKFNEEVYQEILAVKPEVIVVAAYGKLLPREILNIPPYGCLNIHASLLPFYRGAAP 117
Query: 78 THKLLNKIEFDIMIVMGILPE--DTS-LTLQNK---------------LEKLSKILIIDT 119
+ L E + I + + E DT + LQ K L ++ LII+
Sbjct: 118 IERCLMAGEKETGITIMFMDEGLDTGDIALQEKVAINQEITGGELRKILAEIGADLIIEA 177
Query: 120 IKKI-EYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+K++ E + ++ PQ + +YAP +KK + ++ W+ SA+ I +I A NP PGA
Sbjct: 178 LKRLREGGLPRV---PQDHQLATYAPPLKKEDEIIHWADSAEKIRNQIRALNPVPGA--- 231
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
Y ++ KK +KIWKA S KKPG I+ + NG LV G+ +++LELQ KK
Sbjct: 232 YTVFRGKK--IKIWKAKVGEF-SGKKPGEIIFADRKNGFLVATGERGLQILELQPEGGKK 288
Query: 239 ISATEFING 247
+S F+NG
Sbjct: 289 MSWESFLNG 297
>gi|221214669|ref|ZP_03587639.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD1]
gi|221165559|gb|EED98035.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD1]
Length = 327
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
+++IFAGT AAA L ++++ + L+LT+PD +GR G+ +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHDAGFAVPLVLTQPDRPAGRGMKLQASAVKRYALEHGLPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + ++ I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAVEAIEL-LRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ D + G I +DT+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMIQESRIAIASDDTTATLHDRLAAD 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALARLERD-GMLAATPQPADGVTYAEKIGKHEAALDWRRPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +KIW A + PGTI+ +G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKIWAAEPATGRGDATPGTIVEAA-PDGVIVACGTGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|297544785|ref|YP_003677087.1| methionyl-tRNA formyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842560|gb|ADH61076.1| methionyl-tRNA formyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 310
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+F GT A L L+ +N+ ++T+PD GRGMKL FSPVK+ AL+ ++I+
Sbjct: 2 LKIVFMGTPDFAVPSLQKLFEEGYNVASVVTQPDKQKGRGMKLRFSPVKEVALQKGVEIL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP +K N E + L +I D+++V ILPE
Sbjct: 62 QPEKIKNN-------KEFLERLKEINPDVIVVAAYGKILPEEILALPKYGCINVHASLLP 114
Query: 99 -----------------DTSLT--LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIG 139
+T +T L +K ILI +I +E D + S +G
Sbjct: 115 KYRGAAPINWAIINGEKETGITTMLMDKGLDTGDILIKKSIPILEEDDAETLHDKLSRLG 174
Query: 140 -------------------------ESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
SYAP++ K ++W+ +A+ I I P+PG
Sbjct: 175 AEVLIETLKRLEKGTLTPVKQNEEEASYAPILTKEMGHVNWNKTAEEIRNLIRGMKPWPG 234
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
T+Y K K LKIWK + ++ GT+L ++V C K+ +K++E+Q+
Sbjct: 235 CYTFY-----KDKMLKIWKGEIVEYNGKEENGTVLKSK--GDLIVKCDKDALKIVEIQQE 287
Query: 235 NKKKISATEFING 247
KK+S E++ G
Sbjct: 288 GSKKMSIREYLIG 300
>gi|343499314|ref|ZP_08737297.1| methionyl-tRNA formyltransferase [Vibrio tubiashii ATCC 19109]
gi|418479409|ref|ZP_13048491.1| methionyl-tRNA formyltransferase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342823189|gb|EGU57845.1| methionyl-tRNA formyltransferase [Vibrio tubiashii ATCC 19109]
gi|384572920|gb|EIF03424.1| methionyl-tRNA formyltransferase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 315
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT AA L L +SEH+++ + T PD +GRG KL PVK+ AL+H+I +
Sbjct: 5 LKIVFAGTPDFAARHLAALLSSEHDVIAVYTNPDRPAGRGKKLAAPPVKQLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +++ +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKVATLPIEASDTSTSMYEKLAELGPQALVECL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + + Q + +YA + K EA +DW+ A I R + AFNP+P +++I
Sbjct: 185 ADIA--LGNAVPEKQDDALANYAKKLSKEEARIDWNDEAAHIERCVRAFNPWP--MSHFI 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ +T+ GTIL + +GI + G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVDEQSTTQPAGTILQAD-KSGIYIATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|421785888|ref|ZP_16222309.1| methionyl-tRNA formyltransferase [Serratia plymuthica A30]
gi|407751926|gb|EKF62088.1| methionyl-tRNA formyltransferase [Serratia plymuthica A30]
Length = 314
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 136/314 (43%), Gaps = 84/314 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H IV + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHQLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ H +A+ + D+M+V+ ILP+
Sbjct: 65 QPKSLRPEENQHLVAD--------LNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD-MTKLF 131
D L + + K++ + D YD + KL
Sbjct: 117 RWRGAAPIQRSLWAGDNETGVTIMQMDVGLDTGDMMHKIACPIEADDTSATLYDKLAKL- 175
Query: 132 FKPQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPF 172
PQ + E A ++EA+ LDW+LSA + R I AFNP+
Sbjct: 176 -GPQGMLTTLRQMAEGTAQREVQDEALVTYAEKLSKEEARLDWNLSAVQLERCIRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P Y + ++ +K+W+A L+ +PGTI++ + H GI + ++ L +LQ
Sbjct: 235 P---VSYFTIDDQP--VKVWQATVLADTPGAEPGTIIHADKH-GIQIATADGILNLTQLQ 288
Query: 233 KNNKKKISATEFIN 246
KK +SA + +N
Sbjct: 289 PAGKKPMSAQDLLN 302
>gi|406595022|ref|YP_006746152.1| methionyl-tRNA formyltransferase [Alteromonas macleodii ATCC 27126]
gi|406372343|gb|AFS35598.1| methionyl-tRNA formyltransferase [Alteromonas macleodii ATCC 27126]
Length = 316
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 62/303 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L SEH ++ + T+PD +GRG KL SPVK A +++I +
Sbjct: 5 LKVIFAGTPDFAAKHLSALLESEHEVIAVYTQPDRPAGRGKKLTASPVKVLAEENAIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMI--------------VMG-ILPE------- 98
QP SLK ++A+ L+ + + +++ V G ILP+
Sbjct: 65 QPQSLKAQDAQEELASLNADLMVVVAYGLILPTAVLNAPKLGCINVHGSILPKWRGAAPI 124
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
+T +T+ E L +L I T+ D + ++ + +G
Sbjct: 125 QRSIWAGDAETGVTIMQMDEGLDTGDMLHIATLPITSEDTSATLYEKLAELGPQALVEVV 184
Query: 141 ----------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
+YA + K EA+++W+ A+ I R I AFNP+P A Q
Sbjct: 185 NEFDRYTPTKQDDSQATYAKKLSKEEALINWADDAEQIERNIRAFNPWPVAW-----MQV 239
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+ + +K+W A + + PGT+++ N GI + G++ + + LQ KK + A++
Sbjct: 240 EDQNVKVWSASVVPLNKGATPGTVVSAN-KEGITIATGRDALCITTLQIPGKKALPASDV 298
Query: 245 ING 247
IN
Sbjct: 299 INA 301
>gi|297537406|ref|YP_003673175.1| methionyl-tRNA formyltransferase [Methylotenera versatilis 301]
gi|297256753|gb|ADI28598.1| methionyl-tRNA formyltransferase [Methylotenera versatilis 301]
Length = 307
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 141/317 (44%), Gaps = 70/317 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
MKIIFAGT A L L + H IV++LT+PD +GRGMKL F
Sbjct: 1 MKIIFAGTPEFAVPALAALIAAGHQIVMVLTQPDRPAGRGMKLKASPVKVLAEQHGLHVF 60
Query: 46 SP--VKKYALKHSIK--------------IIQPISLKLN--GKYH---------KIANET 78
P +K A++ I+ II + L + G Y+ + A
Sbjct: 61 QPETLKDTAVQAQIEAAHADVMIVAAYGLIIPTVVLNMPKFGCYNIHASLLPRWRGAAPI 120
Query: 79 HK--LLNKIEFDI-------------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
H+ LL E + M+ G++P DT+ TL + L K L++ +
Sbjct: 121 HRSLLLGDAETGVTIMEVVPALDAGAMVSKGVVPITESDTTQTLHDALSKTGADLMVQAM 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++ + L PQ +YA ++K+EA +DW SA + R++ AFNPFP A+
Sbjct: 181 AEL-AEKGSLPATPQDESLVTYAHKLEKSEAAIDWQKSAVELSRQVRAFNPFPVAQGIL- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K + +IW A A E K G I++V +G+ V CG ++ + ELQ K++S
Sbjct: 239 ----KGEVCRIWMATAK--EGKAKIGEIVSVQ--DGVTVGCGDGLLHITELQAPGGKRLS 290
Query: 241 ATEFINGCIKNIKYFIS 257
A F+ G I F S
Sbjct: 291 AQAFVQGHNLQIGDFFS 307
>gi|421549670|ref|ZP_15995680.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 69166]
gi|433470380|ref|ZP_20427780.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 68094]
gi|433476688|ref|ZP_20434016.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 70012]
gi|433520898|ref|ZP_20477600.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 61103]
gi|433525251|ref|ZP_20481897.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 69096]
gi|433537871|ref|ZP_20494358.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 70030]
gi|402331621|gb|EJU66953.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 69166]
gi|432211813|gb|ELK67757.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 68094]
gi|432217841|gb|ELK73706.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 70012]
gi|432262682|gb|ELL17917.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 61103]
gi|432263399|gb|ELL18619.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 69096]
gi|432276011|gb|ELL31073.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 70030]
Length = 308
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA ++K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLRKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|269214257|ref|ZP_06158456.1| methionyl-tRNA formyltransferase [Neisseria lactamica ATCC 23970]
gi|269210258|gb|EEZ76713.1| methionyl-tRNA formyltransferase [Neisseria lactamica ATCC 23970]
Length = 338
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ + +
Sbjct: 31 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLTVA 90
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 91 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAAP 150
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 151 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 210
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 211 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 266
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 267 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 321
Query: 240 SATEFING 247
+ F G
Sbjct: 322 NVAAFAAG 329
>gi|78067946|ref|YP_370715.1| methionyl-tRNA formyltransferase [Burkholderia sp. 383]
gi|123756078|sp|Q39BU5.1|FMT_BURS3 RecName: Full=Methionyl-tRNA formyltransferase
gi|77968691|gb|ABB10071.1| methionyl-tRNA formyltransferase [Burkholderia sp. 383]
Length = 327
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 129/316 (40%), Gaps = 77/316 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR----------------GMKLN 44
++++FAGT AAA L ++ + + L+LT+PD +GR GM +
Sbjct: 5 LRVVFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYAVEHGMPVA 64
Query: 45 FSPVKKYALKHSIKIIQPISLKLNGKYHKI------------------------------ 74
P + A K+ + I L L H +
Sbjct: 65 QPPSLRRAGKYPAEAADAIEL-LRSTPHDVMVVAAYGLLLPQEVLDIPRDGCINIHASLL 123
Query: 75 --------------ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKL 111
A + + ++ DI + G I P++T+ TL ++L
Sbjct: 124 PRWRGAAPIHRAIEAGDAETGVTLMQMDIGLDTGAMIEEARIAIAPDETTATLHDRLAAE 183
Query: 112 SKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
LI+D + ++E D L PQ G +YA I K+EA LDW A + R++ AF+P
Sbjct: 184 GARLIVDALVQLERDGV-LPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
FPG +K+W A ++ PGTI+ G++V CG +++ +L
Sbjct: 243 FPGGVATL-----DGAAIKLWAAEPVAARGEAAPGTIVEAA-PEGVVVACGSGALRVTQL 296
Query: 232 QKNNKKKISATEFING 247
QK K++ A EF+ G
Sbjct: 297 QKPGGKRLPAREFLAG 312
>gi|299068353|emb|CBJ39577.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum CMR15]
Length = 327
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 9/161 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL + L L ++++ + ++ D +L PQ G +YA I K EA LDWS
Sbjct: 172 DTTGTLHDTLAALGGRMVVEALARLAQD-GRLPATPQPAEGVTYAEKIAKEEAALDWSRQ 230
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKPGTILNVNFHNGI 217
+ ++R+++AFNPFPGA S + +K W+A AL + +PG +L + +G+
Sbjct: 231 SAALLRQVHAFNPFPGA-----SAELDGVTIKFWQAEALPDRPADAQPGAVLAADA-DGV 284
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFINGC-IKNIKYFIS 257
++ CG +++ +LQK K++ A EF+ G I++ + F S
Sbjct: 285 VIACGAGALRVTQLQKPGGKRMPAREFLQGLPIRSGQRFAS 325
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM L SPVK+YA+ H + I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGLPVVAVLSQPDRPAGRGMHLQASPVKQYAVSHGLGPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A L+ + D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAAAIDALSAQQPDVMVVAAYGLILPQE 107
>gi|330447315|ref|ZP_08310965.1| methionyl-tRNA formyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491506|dbj|GAA05462.1| methionyl-tRNA formyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 314
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
++I+FAGT AA L L +S+H++V + T+PD +GRG KL +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSQHDVVAVYTQPDRPAGRGKKLTASPVKAIALENDIPVY 64
Query: 46 SPVK---------------------KYALKHSIKIIQPISLKLNGKYHKI---------- 74
PV Y L ++++ L + I
Sbjct: 65 QPVSLRNEEAQQELAAIDADIMVVVAYGLLLPLEVLDTPRLGCINVHGSILPRWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
A +T + ++ DI M+ + LP DTS T+ KL +L +ID +
Sbjct: 125 QRSIWAGDTETGVTIMQMDIGLDTGDMLKVATLPIEATDTSATMYEKLAELGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY- 179
I D T + K Q + +YA + K EA++DW++ A I R + AFNP+P +Y+
Sbjct: 185 SDI-ADGTAVAVK-QDDEQANYAKKLSKEEALIDWTMDAAAIERCVRAFNPWP--MSYFT 240
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
++ QN +K+W+ + K PGTIL+ + GILV G ++L+ LQ KK +
Sbjct: 241 VAEQN----VKVWQTAVEADNQGKAPGTILSAD-KQGILVATGNGALRLISLQPPGKKAM 295
Query: 240 SATEFIN 246
SA + +N
Sbjct: 296 SAADLLN 302
>gi|350529767|ref|ZP_08908708.1| methionyl-tRNA formyltransferase [Vibrio rotiferianus DAT722]
Length = 315
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + Q + +YA + K EA +DW+ A I R + AFNP+P +++
Sbjct: 185 ADIAAGKAEPV--KQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI VV G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSNKPAGTIVQAD-KTGIYVVTGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|170694014|ref|ZP_02885170.1| methionyl-tRNA formyltransferase [Burkholderia graminis C4D1M]
gi|170141086|gb|EDT09258.1| methionyl-tRNA formyltransferase [Burkholderia graminis C4D1M]
Length = 328
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL ++L + LI++ + ++E KL PQ G +YA I K+EA LDW
Sbjct: 170 DDTTATLHDRLAQAGAKLIVEALVELERS-GKLASTPQPADGVTYAEKIGKHEAALDWRR 228
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AF+PFPG ++ +KIW A A + PGTI V+ G+
Sbjct: 229 PAAVLARQVRAFDPFPGG----VATLEDGTAIKIWAAAAQDSTNNAAPGTITGVS-PEGV 283
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CG+ ++L +LQK K++ A EF+ G
Sbjct: 284 VVACGEGALRLTQLQKPGGKRLPAREFLAG 313
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT A+A L ++ + + L+LT+PD +GRGMKL SPVK+YA++H I +
Sbjct: 5 LRVVFAGTPEFASAALAAIHGAGFAVPLVLTQPDRPAGRGMKLQASPVKRYAVEHGIAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY A + L D+M+V ILP++
Sbjct: 65 QPPSLRRAGKYPAEAAAAIEQLRATPHDVMVVAAYGLILPQE 106
>gi|157959860|ref|YP_001499894.1| methionyl-tRNA formyltransferase [Shewanella pealeana ATCC 700345]
gi|189044558|sp|A8GYH2.1|FMT_SHEPA RecName: Full=Methionyl-tRNA formyltransferase
gi|157844860|gb|ABV85359.1| methionyl-tRNA formyltransferase [Shewanella pealeana ATCC 700345]
Length = 321
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ +IFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK AL++ I +
Sbjct: 4 LNVIFAGTPDFAARHLQALIDSEHNVIAVYTQPDRPAGRGKKLQASPVKALALENDIAVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP SL+ + L + DIM+V+ ILP
Sbjct: 64 QPKSLR--------DEDAQAELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILP 115
Query: 98 E----------------DTSLT-LQNKLEKLSKILIIDTIKKIEYDMTK----------- 129
+T +T +Q + + +++ T+ IE + T
Sbjct: 116 RWRGAAPIQRALWAGDTETGVTIMQMDIGLDTGDMLLKTLLPIEDNDTSSTLYEKLAEQG 175
Query: 130 --LFFKPQSNIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
+ + I E P K++E A LDWS A + R+I AFNP+P
Sbjct: 176 PTALVEALAGIAEGTLPAEKQDESLANYAEKLSKEEARLDWSKPASALWREIRAFNPWP- 234
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
Y+++ +K+W++ S+++PGTIL+ + +GI + G+ V+ + ++Q
Sbjct: 235 ----VSHYEHEGNTIKVWQSSVSDETSSQQPGTILSAD-KSGISIATGEGVLTITQMQLP 289
Query: 235 NKKKISATEFIN 246
KK +S + +N
Sbjct: 290 GKKPLSVADILN 301
>gi|50122920|ref|YP_052087.1| methionyl-tRNA formyltransferase [Pectobacterium atrosepticum
SCRI1043]
gi|73919392|sp|Q6D001.1|FMT_ERWCT RecName: Full=Methionyl-tRNA formyltransferase
gi|49613446|emb|CAG76897.1| methionyl-tRNA formyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 315
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFS-------------- 46
++IIFAGT AA LD L +S H +V + T+PD +GRG KL S
Sbjct: 5 LRIIFAGTPDFAARHLDVLLSSGHEVVGVFTQPDRPAGRGNKLTPSPVKVLAEQHSIPVF 64
Query: 47 ------PVKKYALKHSIK------------IIQPI-------SLKLNGKYHKI------- 74
P + A+ ++ + QP+ + ++G +
Sbjct: 65 QPKSLRPAENQAMVEALDADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A ++ + ++ D+ + G ILP+DTS TL +KL L +++T+
Sbjct: 125 QRALWAGDSETGVTIMQMDVGLDTGAMLHKIACPILPQDTSATLYDKLAALGPRGLLETL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ + + Q++ +YA + K EA L+W LSA+ + R I AFNP+P +Y+I
Sbjct: 185 ERLAD--SSAVAEAQNDAFATYAEKLSKEEARLNWLLSAEQLERCIRAFNPWP--VSYFI 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+WKA ++ +PGTIL + GI V ++ + ELQ KK +S
Sbjct: 241 V---DEQPVKVWKAEVIAKSHGSQPGTILQAD-KQGIQVAAADGILNIQELQPAGKKVMS 296
Query: 241 ATEFIN 246
A + +N
Sbjct: 297 AQDLLN 302
>gi|297250812|ref|ZP_06934290.1| methionyl-tRNA formyltransferase [Neisseria polysaccharea ATCC
43768]
gi|296837968|gb|EFH21906.1| methionyl-tRNA formyltransferase [Neisseria polysaccharea ATCC
43768]
Length = 338
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 31 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 90
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 91 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 150
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 151 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVAD 210
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 211 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 266
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + T G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 267 VEYQGKP--MKIRRAEVVAQQGTA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 321
Query: 240 SATEFING 247
+ F G
Sbjct: 322 NIAAFAAG 329
>gi|424039272|ref|ZP_17777673.1| methionyl-tRNA formyltransferase [Vibrio cholerae HENC-02]
gi|408893169|gb|EKM30453.1| methionyl-tRNA formyltransferase [Vibrio cholerae HENC-02]
Length = 315
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 135/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I K Q + +YA + K EA +DW+ A I R + AFNP+P +++
Sbjct: 185 ADIA--TGKAEPVKQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTIL + GI V G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWESRVADQTSDKPAGTILQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|420247910|ref|ZP_14751292.1| methionyl-tRNA formyltransferase [Burkholderia sp. BT03]
gi|398069798|gb|EJL61130.1| methionyl-tRNA formyltransferase [Burkholderia sp. BT03]
Length = 327
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL ++L + LI+D + ++E KL PQ G +YA I K+EA LDW
Sbjct: 171 DTTATLHDRLAEAGAKLIVDVLIELERS-GKLAATPQPADGATYAEKIGKHEAALDWRRP 229
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R++ AF+PFPG LKIW A + S +PGTI++V+ +G++
Sbjct: 230 AVELARQVRAFDPFPGGAATL-----DGAVLKIWSAAPIDAPSRAEPGTIVDVS-PDGVV 283
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG +++ +LQK K++ +F+ G
Sbjct: 284 VACGDGALRITQLQKPGGKRLPVRDFLAG 312
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL SPVK+YA +H I++
Sbjct: 5 LRVIFAGTPEFAAAALAAIHAAGFPVPLVLTQPDRPAGRGMKLQASPVKRYAQEHGIEVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ NGK+ A L D+M+V +LP++
Sbjct: 65 QPPSLRRNGKFPAEATAAIDQLCATPHDVMVVAAYGLLLPQE 106
>gi|153834315|ref|ZP_01986982.1| methionyl-tRNA formyltransferase [Vibrio harveyi HY01]
gi|148869323|gb|EDL68337.1| methionyl-tRNA formyltransferase [Vibrio harveyi HY01]
Length = 315
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + Q + +YA + K EA +DW+ A I R + AFNP+P +++
Sbjct: 185 ADIAAGKAEPV--KQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI VV G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVEEQTSDKPAGTIVQAD-KTGIYVVTGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|333929433|ref|YP_004503012.1| methionyl-tRNA formyltransferase [Serratia sp. AS12]
gi|333934386|ref|YP_004507964.1| methionyl-tRNA formyltransferase [Serratia plymuthica AS9]
gi|386331256|ref|YP_006027426.1| Methionyl-tRNA formyltransferase [Serratia sp. AS13]
gi|333475993|gb|AEF47703.1| Methionyl-tRNA formyltransferase [Serratia plymuthica AS9]
gi|333493493|gb|AEF52655.1| Methionyl-tRNA formyltransferase [Serratia sp. AS12]
gi|333963589|gb|AEG30362.1| Methionyl-tRNA formyltransferase [Serratia sp. AS13]
Length = 314
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 136/314 (43%), Gaps = 84/314 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H IV + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHQLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ H +A+ + D+M+V+ ILP+
Sbjct: 65 QPKSLRPEENQHLVAD--------LNADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD-MTKLF 131
D L + + K++ + D YD + KL
Sbjct: 117 RWRGAAPIQRSLWAGDNETGVTIMQMDVGLDTGDMMHKIACPIESDDTSATLYDKLAKL- 175
Query: 132 FKPQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPF 172
PQ + E A ++EA+ LDW+LSA + R I AFNP+
Sbjct: 176 -GPQGMLTTLLQMAEGTAQREVQDEALVTYAEKLSKEEARLDWNLSAVQLERCIRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P Y + ++ +K+W+A L+ +PGTI++ + H GI + ++ L +LQ
Sbjct: 235 P---VSYFTIDDQP--VKVWQATVLAETPGAEPGTIIHADKH-GIQIATADGILNLTQLQ 288
Query: 233 KNNKKKISATEFIN 246
KK +SA + +N
Sbjct: 289 PAGKKPMSAQDLLN 302
>gi|254507345|ref|ZP_05119481.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus 16]
gi|219549805|gb|EED26794.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus 16]
Length = 315
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LKIVFAGTPDFAAHHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKNIALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIA--------------------------------------------- 75
QP + K + ++A
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 76 --------NETHKLLNKIEFDI----MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
NET + +++ + M+ + LP DTS T+ KL +L +++ +
Sbjct: 125 QRSIWAGDNETGVTIMQMDIGLDTGDMLKIATLPIEATDTSATMYEKLAELGPDALVECL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I K + Q + +YA + K EA ++W+ A I R + AFNP+P +Y+
Sbjct: 185 ADIAE--GKAVPEKQDDELANYAKKLSKEEARINWADDAAHIERCVRAFNPWP--MSYFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTIL + GI V G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVDEQTSDKPAGTILQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|378580948|ref|ZP_09829600.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pantoea stewartii subsp. stewartii
DC283]
gi|377816427|gb|EHT99530.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pantoea stewartii subsp. stewartii
DC283]
Length = 314
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 134/314 (42%), Gaps = 85/314 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA LD L SEH +V + T+PD +GRG KL SPVK AL H I +
Sbjct: 5 LNIIFAGTPDFAARHLDALLASEHKVVGVFTQPDRPAGRGNKLTASPVKALALAHDIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPKSLR--------PAENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF- 131
D L + L KL+ + + YD KL
Sbjct: 117 RWRGAAPIQRALWAGDQETGVTIMQMDVGLDTGDMLVKLACPITAEDTSASLYD--KLAS 174
Query: 132 FKPQ------SNIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPF 172
P+ S + E A +K++E A LDW L A+ + R I AFNP+
Sbjct: 175 LGPEGLLTTLSQLREGNAQPVKQDETLANYAEKLSKEEARLDWQLPAEQLERCIRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P + ++ Q +K+W+A L K+PG I+ + GI + V+ LL+LQ
Sbjct: 235 P-VSFFMVNDQP----VKVWQAGVLP-HVNKRPGEIVKAD-KQGIHIATADGVLNLLQLQ 287
Query: 233 KNNKKKISATEFIN 246
KK +SA + +N
Sbjct: 288 PAGKKPMSAQDLLN 301
>gi|344168506|emb|CCA80796.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [blood disease bacterium R229]
Length = 327
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + ++ L PQ G +YA I
Sbjct: 160 MIAMEHVPIGLTDTTGTLHDTLAALGGRMVVEALARL-AQHGGLPATPQPAEGVTYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K EA LDWS + ++R+++AFNPFPGA S + LK W+A AL + +P
Sbjct: 219 AKEEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVALKFWQAEALPDRPADAQP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGC-IKNIKYFIS 257
GT+L + +G+++ CG +++ +LQK K++ A EF+ G I++ + F S
Sbjct: 274 GTVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLPIRSGQRFAS 325
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM L SPVK+YA+ H + I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGLPVVAVLSQPDRPAGRGMHLQASPVKQYAVSHGLGPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A + L+ D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAAAIEALSAQRPDVMVVAAYGLILPQE 107
>gi|300692917|ref|YP_003753912.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum PSI07]
gi|299079977|emb|CBJ52654.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum PSI07]
Length = 327
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + ++ L PQ G +YA I
Sbjct: 160 MIAMEHVPIGLTDTTGTLHDTLAALGGRMVVEALARL-TQHGGLPATPQPAEGVTYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K EA LDWS + ++R+++AFNPFPGA S + LK W+A AL + +P
Sbjct: 219 AKEEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVALKFWQAEALPDRPADAQP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGC-IKNIKYFIS 257
GT+L + +G+++ CG +++ +LQK K++ A EF+ G I++ + F S
Sbjct: 274 GTVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLPIRSGQRFAS 325
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L ++ + +V +L++PD +GRGM L SPVK+YA+ H + I
Sbjct: 5 LRVAFAGTPEFAQIALAAIHQAGLPVVAVLSQPDRPAGRGMHLQASPVKQYAVSHGLGPI 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A + L+ D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAAAIEALSAQRPDVMVVAAYGLILPQE 107
>gi|284047693|ref|YP_003398032.1| methionyl-tRNA formyltransferase [Acidaminococcus fermentans DSM
20731]
gi|283951914|gb|ADB46717.1| methionyl-tRNA formyltransferase [Acidaminococcus fermentans DSM
20731]
Length = 312
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 133/309 (43%), Gaps = 69/309 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
MKI+F GT AAA L L S + I ++T+PD GRG K+ S VK+YAL + +
Sbjct: 1 MKIVFMGTPEFAAASLKALVESGNCEIAAVVTQPDRPKGRGHKVMMSAVKEYALTQDLPV 60
Query: 60 -----------------IQP--------------------------ISLKLNGKYHKIA- 75
IQP + L +Y A
Sbjct: 61 LQPQRVKTPEFQAEMEKIQPDLIVVAAFGQFLPKELLDLPRYGCINVHASLLPRYRGAAP 120
Query: 76 -------NETHKLLNKIEFDIMIVMGIL---------PEDTSLTLQNKLEKLSKILIIDT 119
E + ++ D+ + G + PE T L + L++ L++DT
Sbjct: 121 IHYAILKGEKEAGVTIMQMDVGMDTGAMLSRTAVPVGPEMTQGELHDILKEKGARLLLDT 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
I +I + +P+ +YA LI ++ DW+ A+ + + AF+P+PG+ T
Sbjct: 181 IPRIVAGTVQPVPQPEEEA--TYASLITRDMERADWNKKAEDLHNQFRAFDPWPGSFTLL 238
Query: 180 ISYQNKKKFLKIWKAHALSIESTK-KPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
K LKIWK+ L+ E ++ PGT+L + G V CG+ +++LE Q KK+
Sbjct: 239 ----PDGKRLKIWKSRILAGEGSQGAPGTVLQAD-SRGFRVACGQGSLEILECQPEGKKR 293
Query: 239 ISATEFING 247
+ A F+NG
Sbjct: 294 MPAASFVNG 302
>gi|378765424|ref|YP_005193883.1| Methionyl-tRNA formyltransferase [Pantoea ananatis LMG 5342]
gi|386077677|ref|YP_005991202.1| Methionyl-tRNA formyltransferase Fmt [Pantoea ananatis PA13]
gi|354986858|gb|AER30982.1| Methionyl-tRNA formyltransferase Fmt [Pantoea ananatis PA13]
gi|365184896|emb|CCF07846.1| Methionyl-tRNA formyltransferase [Pantoea ananatis LMG 5342]
Length = 314
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 137/318 (43%), Gaps = 93/318 (29%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA LD L SEH IV + T+PD +GRG KL SPVK A H+I +
Sbjct: 5 LKIIFAGTPDFAARHLDALLASEHQIVGVFTQPDRPAGRGNKLTASPVKSLAQAHNIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPQSLR--------PAENQQLVADLQADVMVVVAYGLILPKTVLEMPRLGCINVHGSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYD------ 126
D L + L KL+ + + YD
Sbjct: 117 RWRGAAPIQRALWAGDSETGVTIMQMDVGLDTGDMLLKLACPISAEDTSATLYDKLADLG 176
Query: 127 ----MTKLFFKPQSNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAF 169
MT L S + + A ++++E++ L+W+L A+ + R I AF
Sbjct: 177 PAGLMTTL-----SQLRDGNAQAVQQDESLANYAEKLSKEEARLNWTLPAEQLERCIRAF 231
Query: 170 NPFPGAKTYYIS-YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKL 228
NP+P IS + + +K+W+A L K+PG I+ + H GI + V+ L
Sbjct: 232 NPWP------ISFFMVNDQPVKVWQASVLP-HVNKQPGEIIQADKH-GIHIATADGVLNL 283
Query: 229 LELQKNNKKKISATEFIN 246
L+LQ KK +SA + +N
Sbjct: 284 LQLQPAGKKTMSAQDLLN 301
>gi|407681930|ref|YP_006797104.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str.
'English Channel 673']
gi|407243541|gb|AFT72727.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str.
'English Channel 673']
Length = 316
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 62/303 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L SEH I+ + T+PD +GRG KL SPVK A +++I +
Sbjct: 5 LKVIFAGTPDFAAKHLSALLASEHEIIAVYTQPDRPAGRGKKLTASPVKVLAEENAIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMI--------------VMG-ILPE------- 98
QP SLK ++A+ L+ + + +++ V G ILP+
Sbjct: 65 QPQSLKAQDAQEELASLNADLMVVVAYGLILPTAVLNAPKLGCINVHGSILPKWRGAAPI 124
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
+T +T+ E L +L I T+ D + ++ + +G
Sbjct: 125 QRSIWAGDAETGVTIMQMDEGLDTGDMLHIATLPITFEDTSATLYEKLAELGPQALVEVV 184
Query: 141 ----------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
+YA + K EA+++W+ A+ I R I AFNP+P A Q
Sbjct: 185 NEFDRYTPTKQDDSQATYAKKLSKEEALINWADDAEQIERNIRAFNPWPVAW-----MQV 239
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+ + +K+W A + + PGT+++ N GI + G++ + + LQ KK + A++
Sbjct: 240 EDQNVKVWSASVVPLNKGATPGTVISAN-KEGITIATGRDALCITSLQIPGKKALPASDV 298
Query: 245 ING 247
IN
Sbjct: 299 INA 301
>gi|121633989|ref|YP_974234.1| methionyl-tRNA formyltransferase [Neisseria meningitidis FAM18]
gi|385327477|ref|YP_005881780.1| methionyl-tRNA formyltransferase [Neisseria meningitidis alpha710]
gi|385342848|ref|YP_005896719.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240149]
gi|385856259|ref|YP_005902771.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NZ-05/33]
gi|416167584|ref|ZP_11607682.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
OX99.30304]
gi|416176243|ref|ZP_11609544.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M6190]
gi|416186058|ref|ZP_11613507.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M0579]
gi|416190859|ref|ZP_11615970.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ES14902]
gi|421553860|ref|ZP_15999812.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 98008]
gi|433468309|ref|ZP_20425747.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 98080]
gi|433491584|ref|ZP_20448687.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM586]
gi|433495822|ref|ZP_20452871.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M7089]
gi|433497822|ref|ZP_20454839.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M7124]
gi|433499894|ref|ZP_20456887.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM174]
gi|433502004|ref|ZP_20458977.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM126]
gi|166215489|sp|A1KRE6.1|FMT_NEIMF RecName: Full=Methionyl-tRNA formyltransferase
gi|120865695|emb|CAM09422.1| methionyl-tRNA formyltransferase [Neisseria meningitidis FAM18]
gi|308388329|gb|ADO30649.1| methionyl-tRNA formyltransferase [Neisseria meningitidis alpha710]
gi|325131146|gb|EGC53867.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
OX99.30304]
gi|325133178|gb|EGC55849.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M6190]
gi|325137170|gb|EGC59765.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M0579]
gi|325138790|gb|EGC61342.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ES14902]
gi|325203054|gb|ADY98508.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240149]
gi|325207148|gb|ADZ02600.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NZ-05/33]
gi|402334218|gb|EJU69510.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 98008]
gi|432206645|gb|ELK62649.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 98080]
gi|432231269|gb|ELK86936.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM586]
gi|432237005|gb|ELK92605.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M7124]
gi|432237464|gb|ELK93057.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M7089]
gi|432237962|gb|ELK93547.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM174]
gi|432243759|gb|ELK99265.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM126]
Length = 308
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|17544791|ref|NP_518193.1| methionyl-tRNA formyltransferase [Ralstonia solanacearum GMI1000]
gi|21542042|sp|Q8Y3A8.1|FMT_RALSO RecName: Full=Methionyl-tRNA formyltransferase
gi|17427080|emb|CAD13600.1| probable methionyl-trna formyltransferase protein [Ralstonia
solanacearum GMI1000]
Length = 327
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
MI M +P DT+ TL + L L ++++ + ++ D + L PQ G +YA I
Sbjct: 160 MIAMEHVPIGLTDTTGTLHDTLAALGGRMVVEALARLAQDGS-LPATPQPAEGVTYAEKI 218
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K EA LDWS + ++R+++AFNPFPGA S + +K W+A AL + +P
Sbjct: 219 AKEEAALDWSRQSAALLRQVHAFNPFPGA-----SAELDGVSIKFWQAEALPDRPADAQP 273
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGC-IKNIKYFIS 257
G +L + +G+++ CG +++ +LQK K++ A EF+ G I+ + F S
Sbjct: 274 GAVLAADA-DGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLPIRPGQRFAS 325
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L L+ + IV +L++PD +GRGM L SPVK+YA+ H + +
Sbjct: 5 LRVAFAGTPEFAQIALAALHQAGLPIVAVLSQPDRPAGRGMHLQASPVKQYAVSHGLGPV 64
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A L+ + D+M+V ILP++
Sbjct: 65 LQPPSLRRTGKYPQEAAAAIDALSAQQPDVMVVAAYGLILPQE 107
>gi|322421199|ref|YP_004200422.1| methionyl-tRNA formyltransferase [Geobacter sp. M18]
gi|320127586|gb|ADW15146.1| methionyl-tRNA formyltransferase [Geobacter sp. M18]
Length = 314
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIF GT A L TL N+V ++T+PD GRG + PVK A H I ++
Sbjct: 4 MRIIFMGTPEFACPTLRTLIERGENVVAVVTQPDRPKGRGQQTLPPPVKVVAEGHGIPVL 63
Query: 61 QPISLKLN-------------------------------------------GKYHKIA-- 75
QP+ ++L +Y A
Sbjct: 64 QPVKVRLPESIEQIRALEPDLIVVVAFGQILPKALLEIPKHGCVNVHASLLPRYRGAAPL 123
Query: 76 ------NETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
ET + + D+ + G I P++ + +L +++ +L L+ T+
Sbjct: 124 NWCIINGETETGVTTMMMDVGLDTGDMLLKSATPIDPDEDTQSLHDRMSRLGAELLAQTL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ +L + Q + YA ++KK + ++DW+ SA+ I ++ P+PGA ++
Sbjct: 184 DRLKA--GELVPEKQDDSLTCYAAMMKKEDGLIDWTRSAQQIKNQVRGMTPWPGAFSFL- 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K LK++K S + PG ++ +GI V CG+ + + ELQ KK+++
Sbjct: 241 ----DDKLLKVYKVQTAS--GSGAPGEVVAAG-RDGIEVACGEGSLLIRELQLEGKKRMA 293
Query: 241 ATEFING 247
A +F+ G
Sbjct: 294 AGDFLAG 300
>gi|424034608|ref|ZP_17774011.1| methionyl-tRNA formyltransferase [Vibrio cholerae HENC-01]
gi|408872269|gb|EKM11490.1| methionyl-tRNA formyltransferase [Vibrio cholerae HENC-01]
Length = 315
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + Q + +YA + K EA +DW+ A I R + AFNP+P +++
Sbjct: 185 ADIAAGKAEPV--KQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKP-GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ +N +K+W++ ++++++ KP GTIL + GI V G V+ L +LQ KK +
Sbjct: 241 AAENS---IKVWESR-VTVQTSDKPAGTILQAD-KTGIYVATGNGVLVLEQLQVPGKKAM 295
Query: 240 SATEFIN 246
S + +N
Sbjct: 296 SVQDILN 302
>gi|260771087|ref|ZP_05880015.1| methionyl-tRNA formyltransferase [Vibrio furnissii CIP 102972]
gi|260613976|gb|EEX39167.1| methionyl-tRNA formyltransferase [Vibrio furnissii CIP 102972]
Length = 315
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKHLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E + L + DIM+V+ ILP
Sbjct: 65 QPENFK--------SDEAKQALASLNADIMVVVAYGLLLPKAVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDAETGVTIMQMDVGLDTGDMLKIATLPIDASDTSSSMYDKLAELG 176
Query: 134 PQ------SNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
PQ S+I + A +K+++A+ +DW+LSA+ I R + AFNP+P
Sbjct: 177 PQALVDCLSDIAQGTAVAVKQDDALANYAQKLSKEEAKIDWTLSAQAIERCVRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+++ +N+ +K+W++ + ST PGTI+ + GI V G+ ++ L LQ
Sbjct: 236 -MSHFSVAENQ---IKVWQSRVETGNSTHAPGTIIQAD-KTGIYVATGEGILVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|377555547|ref|ZP_09785275.1| methionyl-tRNA formyltransferase [endosymbiont of Bathymodiolus
sp.]
Length = 311
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 133/311 (42%), Gaps = 72/311 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT + +L L N+ H+IV + +PD GRG L+ VK+ ALKH++ +
Sbjct: 1 MRIVFAGTPEFSVGVLTALINAGHDIVGVYCQPDRPKGRGRILSACAVKEQALKHNLSVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP SLK ++ K L + D+M+V+ +LP
Sbjct: 61 QPESLK--------DDDAQKTLFALNADVMVVVAYGQLLPKLVLDSPKYGCLNIHASLLP 112
Query: 98 E-------------------------DTSLTLQN-KLEKLSKILIIDTIKKIEYDMTKLF 131
D L N LEK+ I ID+ + + + L
Sbjct: 113 RWRGAAPIQRAILAGDKTTGVSIMQMDEGLDTGNILLEKICDIADIDSAQTLHDKLATLG 172
Query: 132 FKP---------------QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAK 176
K Q+ G +YA +KK+EA +DW SA I R+I AFNP+P A+
Sbjct: 173 AKAIIEALENFDNLSPTKQNEEGVTYAKKLKKDEAWIDWRQSADKINRQIRAFNPYPIAQ 232
Query: 177 TYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
+ S + + K L+I A + S +KPG ++ + + G ++ L ++Q + K
Sbjct: 233 SNATSDKFESKVLRILSASIVEKTSHEKPGEVIQPSTKGACYIATGNGILSLEQVQLSGK 292
Query: 237 KKISATEFING 247
K +F N
Sbjct: 293 KIAHIKDFSNA 303
>gi|313667407|ref|YP_004047691.1| methionyl-tRNA formyltransferase [Neisseria lactamica 020-06]
gi|313004869|emb|CBN86295.1| methionyl-tRNA formyltransferase [Neisseria lactamica 020-06]
Length = 308
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|398832312|ref|ZP_10590473.1| methionyl-tRNA formyltransferase [Herbaspirillum sp. YR522]
gi|398223409|gb|EJN09753.1| methionyl-tRNA formyltransferase [Herbaspirillum sp. YR522]
Length = 317
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 88/150 (58%), Gaps = 7/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ +L +KL L +I++ + +E +P++ + +YA I K EA LD+S+
Sbjct: 166 DDTTGSLHDKLAALGGSMIVEALAALERGEVTARVQPEAGV--TYAAKIAKEEAALDFSM 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
+A + R+I AFNPFPGA + + +K+W+A +++ + PG +L+ + GI
Sbjct: 224 AADDLARRIRAFNPFPGA-----TGRVGDTVIKLWQARPVTVAAGGAPGQVLSADAQGGI 278
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CG+ ++L ELQK K++ A EF+ G
Sbjct: 279 VVACGRGALQLTELQKPGGKRLGAREFLQG 308
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AAA L+ LY + H+I L+LT+PD +GRGM+L S VK+ AL+H +
Sbjct: 1 MKIIFAGTPEFAAAALEALYAAGHDITLVLTQPDRPAGRGMQLQASAVKQSALRHGTPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L+GK+ ++A + H LL D+M+V ILP
Sbjct: 61 QPVSLRLDGKHPEVARQAHALLQSTAHDVMVVAAYGLILPR 101
>gi|261823201|ref|YP_003261307.1| methionyl-tRNA formyltransferase [Pectobacterium wasabiae WPP163]
gi|261607214|gb|ACX89700.1| methionyl-tRNA formyltransferase [Pectobacterium wasabiae WPP163]
gi|385873666|gb|AFI92186.1| Methionyl-tRNA formyltransferase [Pectobacterium sp. SCC3193]
Length = 315
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFS-------------- 46
++IIFAGT AA LD L +S H +V + T+PD SGRG KL S
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHEVVGVFTQPDRPSGRGNKLTPSPVKVLAEQHSIPVF 64
Query: 47 ------PVKKYALKHSIK------------IIQPI-------SLKLNGKYHKI------- 74
P + A+ ++ + QP+ + ++G +
Sbjct: 65 QPKSLRPAENQAMVEALSADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A ++ + ++ D+ + G ILP+DTS TL +KL +L +++T+
Sbjct: 125 QRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILPQDTSATLYDKLAELGPRGLLETL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ D + + + Q++ +YA + K EA L+W LSA+ + R I AFNP+P +Y+I
Sbjct: 185 EQL-ADGSAVA-EAQNDALATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWP--VSYFI 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+WKA A++ +PGTI+ GI V ++ + ELQ KK +S
Sbjct: 241 V---DEQPVKVWKAEAIAKAHGLQPGTIIQAE-KQGIQVATANGILNIQELQPAGKKVMS 296
Query: 241 ATEFIN 246
A + +N
Sbjct: 297 AHDLLN 302
>gi|332525409|ref|ZP_08401569.1| methionyl-tRNA formyltransferase [Rubrivivax benzoatilyticus JA2]
gi|332108678|gb|EGJ09902.1| methionyl-tRNA formyltransferase [Rubrivivax benzoatilyticus JA2]
Length = 316
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL +KL L L++D + +++ L PQ G +YA I+K E +DW+L
Sbjct: 169 DDTTATLHDKLAALGARLVVDALGRLD----ALPPLPQPEAGANYAAKIEKAEGAVDWTL 224
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A I R++ AF+PFPG S+ + K+W+A + +PG +L + G+
Sbjct: 225 PAAVIERRVRAFDPFPG-----CSFTLDGEAFKLWRAAV--VPGAGEPGAVL-ASGDGGL 276
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CG ++L ELQ+ +++ A EF+ G
Sbjct: 277 VVACGDGALELRELQRTGGRRVPAREFLKG 306
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++ FAGT A LD + + + L+LT+PD +GRGMKL SPVK+ AL H + +
Sbjct: 4 LRAAFAGTPEFARVALDAMLAAGFEVPLVLTQPDRPAGRGMKLQASPVKQCALAHGLPVA 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY A L D+++V ILP+
Sbjct: 64 QPRSLRLDGKYPDEAAAGRAALEAAAPDVLVVAAYGLILPQ 104
>gi|433472492|ref|ZP_20429862.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 97021]
gi|433480916|ref|ZP_20438188.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2006087]
gi|433483040|ref|ZP_20440280.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2002038]
gi|433485138|ref|ZP_20442345.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 97014]
gi|432212376|gb|ELK68314.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 97021]
gi|432219269|gb|ELK75116.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2006087]
gi|432223870|gb|ELK79645.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2002038]
gi|432224981|gb|ELK80741.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 97014]
Length = 308
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 140/309 (45%), Gaps = 72/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEY-DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+++++ D +P+ + +YA + K EA +DWS SA I RKI AFNP P A
Sbjct: 181 LQQLQSKDRLNAVKQPEEGV--TYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA--- 235
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
++ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ ++
Sbjct: 236 WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRR 290
Query: 239 ISATEFING 247
++ F G
Sbjct: 291 MNIAAFAAG 299
>gi|59802190|ref|YP_208902.1| hypothetical protein NGO1870 [Neisseria gonorrhoeae FA 1090]
gi|268602402|ref|ZP_06136569.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID18]
gi|291042745|ref|ZP_06568486.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae DGI2]
gi|73919409|sp|Q5F5P7.1|FMT_NEIG1 RecName: Full=Methionyl-tRNA formyltransferase
gi|59719085|gb|AAW90490.1| putative methionyl-tRNA formyltransferase [Neisseria gonorrhoeae FA
1090]
gi|268586533|gb|EEZ51209.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID18]
gi|291013179|gb|EFE05145.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae DGI2]
Length = 308
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESADIIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + T G +L+ + +G++V CG++ +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGTA--GEVLSCSA-DGLVVACGESALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|388599828|ref|ZP_10158224.1| methionyl-tRNA formyltransferase [Vibrio campbellii DS40M4]
Length = 315
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 134/306 (43%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTPPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYSLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I K Q + +YA + K EA +DW+ A I R + AF P+P +++
Sbjct: 185 ADIAAGKAKPV--KQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFTPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTIL + GI VV G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVEEQTSDKPAGTILQAD-KTGIYVVTGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|268604664|ref|ZP_06138831.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID1]
gi|268588795|gb|EEZ53471.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID1]
Length = 308
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESADIIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + T G +L+ + +G++V CG++ +K+ ELQ +++
Sbjct: 237 VQYQGKP--MKIRRAEVVAQQGTA--GEVLSCSA-DGLVVACGESALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|194099886|ref|YP_002003023.1| hypothetical protein NGK_2398 [Neisseria gonorrhoeae NCCP11945]
gi|240015127|ref|ZP_04722040.1| Fmt [Neisseria gonorrhoeae DGI18]
gi|240017577|ref|ZP_04724117.1| Fmt [Neisseria gonorrhoeae FA6140]
gi|240122198|ref|ZP_04735160.1| Fmt [Neisseria gonorrhoeae PID24-1]
gi|254494752|ref|ZP_05107923.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae 1291]
gi|268593744|ref|ZP_06127911.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae 35/02]
gi|268597817|ref|ZP_06131984.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae FA19]
gi|268600060|ref|ZP_06134227.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae MS11]
gi|268683122|ref|ZP_06149984.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID332]
gi|268683214|ref|ZP_06150076.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae SK-92-679]
gi|268687549|ref|ZP_06154411.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae SK-93-1035]
gi|293398235|ref|ZP_06642440.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae F62]
gi|238693219|sp|B4RPX5.1|FMT_NEIG2 RecName: Full=Methionyl-tRNA formyltransferase
gi|193935176|gb|ACF31000.1| Fmt [Neisseria gonorrhoeae NCCP11945]
gi|226513792|gb|EEH63137.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae 1291]
gi|268547133|gb|EEZ42551.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae 35/02]
gi|268551605|gb|EEZ46624.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae FA19]
gi|268584191|gb|EEZ48867.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae MS11]
gi|268623406|gb|EEZ55806.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID332]
gi|268623498|gb|EEZ55898.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae SK-92-679]
gi|268627833|gb|EEZ60233.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae SK-93-1035]
gi|291611498|gb|EFF40568.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae F62]
Length = 308
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESADIIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + T G +L+ + +G++V CG++ +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGTA--GEVLSCS-ADGLVVACGESALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|339478026|ref|YP_004706846.1| methionyl-tRNA formyltransferase [Candidatus Moranella endobia
PCIT]
gi|338172577|gb|AEI74978.1| methionyl-tRNA formyltransferase [Candidatus Moranella endobia
PCIT]
Length = 318
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 141/325 (43%), Gaps = 87/325 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L ++H IV +LT+PD +GRG +L S VK+ A HSI +
Sbjct: 6 LRIIFAGTPDFAARHLEALIRTKHQIVGVLTQPDRPTGRGYRLTSSSVKQLADMHSIPLF 65
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDT----------------- 100
QP SLK E + + K++ DIM+V+ ILP
Sbjct: 66 QPSSLK--------TLEAQRWVAKLKADIMVVVAYGLILPPAVLELPRLGCINVHGSLLP 117
Query: 101 ----SLTLQNKL---EKLSKILIIDTIKKIE--------------YDMTKLFFKPQSNIG 139
S LQ L ++ + + II ++ +D + +K S IG
Sbjct: 118 RWRGSAPLQRALCAGDEFTGVTIIQMDTGLDTGAILHKVTCTIHPHDTSASLYKKLSQIG 177
Query: 140 E-------------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+YA I K EA +DW L A + I AFNP+P
Sbjct: 178 PDALLFTIEQLAAGNATAEPQDNSRATYADKISKEEARIDWRLPAVQLALYIRAFNPWP- 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIE---STKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
T Y + + +K+W A ++S + S PGTIL N GI + G V++L +L
Sbjct: 237 --TSYYPWSGQS--IKVWDA-SVSAQHNISCAPPGTILAAN-KAGIYIATGDGVLRLTQL 290
Query: 232 QKNNKKKISATEFINGCIKNIKYFI 256
Q KK++ +N + ++FI
Sbjct: 291 QLAGKKQMPVQALLNA---HSEWFI 312
>gi|416159204|ref|ZP_11605680.1| methionyl-tRNA formyltransferase [Neisseria meningitidis N1568]
gi|325129147|gb|EGC51995.1| methionyl-tRNA formyltransferase [Neisseria meningitidis N1568]
Length = 308
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDAPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|385336804|ref|YP_005890751.1| hypothetical protein NGTW08_1933 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|317165347|gb|ADV08888.1| Fmt [Neisseria gonorrhoeae TCDC-NG08107]
Length = 320
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 13 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 72
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 73 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP 132
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 133 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 192
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 193 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESADIIERKIRAFNPVPAA---W 248
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + T G +L+ + +G++V CG++ +K+ ELQ +++
Sbjct: 249 VEYQGKP--MKIRRAEVVAQQGTA--GEVLSCSA-DGLVVACGESALKITELQPAGGRRM 303
Query: 240 SATEFING 247
+ F G
Sbjct: 304 NIAAFAAG 311
>gi|421566583|ref|ZP_16012326.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3001]
gi|433535711|ref|ZP_20492231.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 77221]
gi|402345007|gb|EJU80134.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3001]
gi|432276722|gb|ELL31777.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 77221]
Length = 308
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|186474807|ref|YP_001856277.1| methionyl-tRNA formyltransferase [Burkholderia phymatum STM815]
gi|238691318|sp|B2JJU4.1|FMT_BURP8 RecName: Full=Methionyl-tRNA formyltransferase
gi|184191266|gb|ACC69231.1| methionyl-tRNA formyltransferase [Burkholderia phymatum STM815]
Length = 327
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL ++L + LI+D + ++E KL PQ G +YA I K+EA LDW
Sbjct: 171 DTTATLHDRLAEAGAKLIVDALVELERS-GKLASIPQPAAGATYAEKIAKHEAALDWRRP 229
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R++ AF+PFPG LK+W A A+ +PGTI+ V+ G++
Sbjct: 230 AAELARQVRAFDPFPGGAATL-----DGAVLKLWSAAAVDASCKAEPGTIVEVS-PEGVV 283
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG +++ +LQK K++ +F+ G
Sbjct: 284 VACGDGALRITQLQKPGGKRLPVRDFLAG 312
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL SPVK+YA +H I++
Sbjct: 5 LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASPVKRYAQEHGIEVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ NGKY A + L D+M+V +LP++
Sbjct: 65 QPPSLRRNGKYPAQATAAIEQLRATPHDVMVVAAYGLLLPQE 106
>gi|404498187|ref|YP_006722293.1| methionyl-tRNA formyltransferase [Geobacter metallireducens GS-15]
gi|418065918|ref|ZP_12703287.1| methionyl-tRNA formyltransferase [Geobacter metallireducens RCH3]
gi|123729163|sp|Q39QC2.1|FMT_GEOMG RecName: Full=Methionyl-tRNA formyltransferase
gi|78195785|gb|ABB33552.1| methionyl-tRNA formyltransferase [Geobacter metallireducens GS-15]
gi|373561425|gb|EHP87660.1| methionyl-tRNA formyltransferase [Geobacter metallireducens RCH3]
Length = 311
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 129/308 (41%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIF GT A L L +++ ++T+PD GRG KL PVK A +H I ++
Sbjct: 4 LSIIFMGTPDFACPTLTRLIERGEDVIAVVTQPDRPKGRGQKLVPPPVKVIAEEHGIPVL 63
Query: 61 QP-------------------------------------------ISLKLNGKYHKIA-- 75
QP I L +Y A
Sbjct: 64 QPQKVRAPEVVAQIRELNPDLIVVVAFGQILPQSLLEIPRHGCINIHASLLPRYRGAAPI 123
Query: 76 ------NETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
ET + ++ D + G I P++ + +L ++L L I +T+
Sbjct: 124 NWCLINGETETGITTMQMDAGLDTGDMLVKRSISIGPDEDAQSLHDRLSLLGAETIDETL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ + L + Q + YAP++KK + ++DW + I + F P+PGA T
Sbjct: 184 DRLQ--VGTLTREKQDDALTCYAPMLKKEDGLIDWKQEPQQIKNLVRGFTPWPGAYTTL- 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K LK++K + KPG I+ V +GI+V CG +++ ELQ +K++S
Sbjct: 241 ----DGKTLKLYKVSVAT--ECGKPGDIMAVG-KDGIIVGCGSGSLRIEELQLEGRKRLS 293
Query: 241 ATEFINGC 248
A +F+ GC
Sbjct: 294 AQDFLAGC 301
>gi|209515833|ref|ZP_03264695.1| methionyl-tRNA formyltransferase [Burkholderia sp. H160]
gi|209503681|gb|EEA03675.1| methionyl-tRNA formyltransferase [Burkholderia sp. H160]
Length = 331
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL ++L + LI++ + ++E KL PQ G +YA I K+EA LDW
Sbjct: 170 DDTTATLHDRLAEDGAQLIVEALIELERS-GKLASTPQPADGVTYAEKIAKHEAALDWRR 228
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIEST---KKPGTILNVNFH 214
A+ + R++ AF+PFPG +KIW A A++ ++ K PGTI ++
Sbjct: 229 PAEALARQVRAFDPFPGGAGTL----EDGSIIKIWAATAVATPASGNNKAPGTIAEIS-P 283
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G+LV CG+ ++L +LQK K++ EF+ G
Sbjct: 284 DGVLVACGEGALRLTQLQKPGGKRLPVREFLAG 316
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL SPVK++A +H + +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHRAGFPVPLVLTQPDRPAGRGMKLQASPVKRFAQEHGLAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY + A + L D+M+V ILP++
Sbjct: 65 QPTSLRRAGKYPQEAAAGIEQLRATPHDVMVVAAYGLILPQE 106
>gi|304388912|ref|ZP_07370959.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ATCC
13091]
gi|304337046|gb|EFM03233.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ATCC
13091]
Length = 338
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 31 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 90
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 91 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 150
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 151 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 210
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 211 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 266
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 267 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 321
Query: 240 SATEFING 247
+ F G
Sbjct: 322 NIAAFAAG 329
>gi|421556097|ref|ZP_16002014.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 80179]
gi|402337950|gb|EJU73189.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 80179]
Length = 308
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRTIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|416211455|ref|ZP_11621381.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240013]
gi|325145433|gb|EGC67709.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240013]
Length = 308
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|15676039|ref|NP_273169.1| methionyl-tRNA formyltransferase [Neisseria meningitidis MC58]
gi|385852321|ref|YP_005898835.1| methionyl-tRNA formyltransferase [Neisseria meningitidis H44/76]
gi|416194641|ref|ZP_11617411.1| methionyl-tRNA formyltransferase [Neisseria meningitidis CU385]
gi|433464105|ref|ZP_20421599.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM422]
gi|433487309|ref|ZP_20444488.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M13255]
gi|433489483|ref|ZP_20446622.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM418]
gi|433504009|ref|ZP_20460954.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 9506]
gi|433506163|ref|ZP_20463082.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 9757]
gi|433508480|ref|ZP_20465366.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 12888]
gi|433510379|ref|ZP_20467223.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 4119]
gi|21542060|sp|Q9K1K6.1|FMT_NEIMB RecName: Full=Methionyl-tRNA formyltransferase
gi|7225326|gb|AAF40570.1| methionyl-tRNA formyltransferase [Neisseria meningitidis MC58]
gi|325141256|gb|EGC63755.1| methionyl-tRNA formyltransferase [Neisseria meningitidis CU385]
gi|325199325|gb|ADY94780.1| methionyl-tRNA formyltransferase [Neisseria meningitidis H44/76]
gi|389604731|emb|CCA43657.1| methionyl-tRNA formyltransferase [Neisseria meningitidis alpha522]
gi|432205915|gb|ELK61930.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM422]
gi|432226074|gb|ELK81807.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M13255]
gi|432230479|gb|ELK86154.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM418]
gi|432243392|gb|ELK98903.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 9506]
gi|432244179|gb|ELK99674.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 9757]
gi|432250131|gb|ELL05529.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 12888]
gi|432250657|gb|ELL06047.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 4119]
Length = 308
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|218767201|ref|YP_002341713.1| methionyl-tRNA formyltransferase [Neisseria meningitidis Z2491]
gi|385338992|ref|YP_005892865.1| methionyl-tRNA formyltransferase [Neisseria meningitidis WUE 2594]
gi|433474585|ref|ZP_20431933.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 88050]
gi|433478934|ref|ZP_20436233.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 63041]
gi|433512469|ref|ZP_20469271.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 63049]
gi|433514621|ref|ZP_20471397.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2004090]
gi|433516696|ref|ZP_20473450.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 96023]
gi|433518889|ref|ZP_20475616.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 65014]
gi|433523038|ref|ZP_20479711.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 97020]
gi|433527273|ref|ZP_20483886.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3652]
gi|433529364|ref|ZP_20485964.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3642]
gi|433531486|ref|ZP_20488055.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2007056]
gi|433533730|ref|ZP_20490279.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2001212]
gi|433540044|ref|ZP_20496501.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 63006]
gi|21542059|sp|Q9JWY9.1|FMT_NEIMA RecName: Full=Methionyl-tRNA formyltransferase
gi|121051209|emb|CAM07480.1| methionyl-tRNA formyltransferase [Neisseria meningitidis Z2491]
gi|319411406|emb|CBY91817.1| methionyl-tRNA formyltransferase [Neisseria meningitidis WUE 2594]
gi|432212645|gb|ELK68580.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 88050]
gi|432218908|gb|ELK74760.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 63041]
gi|432250224|gb|ELL05619.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 63049]
gi|432256285|gb|ELL11608.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2004090]
gi|432256488|gb|ELL11810.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 96023]
gi|432256854|gb|ELL12165.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 65014]
gi|432262911|gb|ELL18142.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 97020]
gi|432267342|gb|ELL22520.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3652]
gi|432269506|gb|ELL24663.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2007056]
gi|432270015|gb|ELL25162.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3642]
gi|432274283|gb|ELL29376.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 2001212]
gi|432278025|gb|ELL33069.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 63006]
Length = 308
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|427826211|ref|ZP_18993270.1| methionyl-tRNA formyltransferase [Neisseria meningitidis H44/76]
gi|316985957|gb|EFV64896.1| methionyl-tRNA formyltransferase [Neisseria meningitidis H44/76]
Length = 338
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 31 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 90
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 91 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 150
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 151 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 210
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 211 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAA---W 266
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 267 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 321
Query: 240 SATEFING 247
+ F G
Sbjct: 322 NIAAFAAG 329
>gi|418287325|ref|ZP_12899938.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM233]
gi|372203896|gb|EHP17493.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM233]
Length = 308
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|375129418|ref|YP_004991514.1| methionyl-tRNA formyltransferase [Vibrio furnissii NCTC 11218]
gi|315178588|gb|ADT85502.1| methionyl-tRNA formyltransferase [Vibrio furnissii NCTC 11218]
Length = 315
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 84/315 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKHLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E + L + DIM+V+ ILP
Sbjct: 65 QPENFK--------SDEAKQALASLNADIMVVVAYGLLLPKAVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQ--------NKLEKLSKILI--IDTIKKIEYDMTKLF 131
+T +T+ + K++K+ I DT + + +L
Sbjct: 117 RWRGAAPIQRSIWAGDAETGVTIMQMDVGLDTGDMLKIAKLPIDASDTSSSMYDKLAEL- 175
Query: 132 FKPQ------SNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPF 172
PQ S+I + A +K+++A+ +DW+LSA+ I R + AFNP+
Sbjct: 176 -GPQALVDCLSDIAQGTAVAVKQDDALANYAQKLSKEEAKIDWTLSAQEIERCVRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P +++ +N+ +K+W++ + ST PGTI+ + GI V G+ ++ L LQ
Sbjct: 235 P--MSHFSVAENQ---IKVWQSRVETGNSTHTPGTIIQAD-KTGIYVATGEGILVLESLQ 288
Query: 233 KNNKKKISATEFING 247
KK + + +N
Sbjct: 289 IPGKKALPVQDILNA 303
>gi|330818687|ref|YP_004362392.1| Methionyl-tRNA formyltransferase [Burkholderia gladioli BSR3]
gi|327371080|gb|AEA62436.1| Methionyl-tRNA formyltransferase [Burkholderia gladioli BSR3]
Length = 327
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ +L +KL L LI++ + K+E + KL PQ G +YA I K+EA LDW
Sbjct: 170 DDTTASLHDKLATLGSQLIVEALVKLERE-GKLAASPQPAEGITYAEKIGKHEAALDWRE 228
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A+ + R+I AF+PFPG LK+W A A + +PGTIL G+
Sbjct: 229 PAEVLARRIRAFDPFPGGAGTL-----DGSVLKLWAAEAEAARGAAEPGTILEAGA-EGV 282
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFINGC 248
L+ CG +++ +LQK K++ A EF+ G
Sbjct: 283 LIACGSGTLRVTQLQKPGGKRLPAREFLAGA 313
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL S VK+YAL+H + +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHQAGFPVPLVLTQPDRPAGRGMKLQASAVKQYALEHGLPVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ NGK+ A LN D+M+V +LP++
Sbjct: 65 QPPSLRRNGKFPAEAATALDTLNATPHDVMVVAAYGLLLPQE 106
>gi|420157132|ref|ZP_14663972.1| methionyl-tRNA formyltransferase [Clostridium sp. MSTE9]
gi|394757142|gb|EJF40201.1| methionyl-tRNA formyltransferase [Clostridium sp. MSTE9]
Length = 308
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 135/308 (43%), Gaps = 72/308 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A L L ++ H + + T+PD GRG L PVK+ AL+ I +
Sbjct: 1 MRIVFMGTPDFAVPCLQALLDAGHEVCGVFTQPDKPKGRGYALAPPPVKELALERGIPVY 60
Query: 61 QP---------------------------------ISLKLNG----------KYHKIANE 77
QP + L L+G KY A
Sbjct: 61 QPATLRTPEAAALVASLSPEVIVVVAYGKLLPKEILQLPLHGCINVHASLLPKYRGAAPI 120
Query: 78 THKLLNKIEF---------------DIMIV--MGILPEDTSLTLQNKLEKLSKILIIDTI 120
++N E DI++V I +TS L ++L +L ++++T+
Sbjct: 121 QWAVINGDEVTGVATMQMDEGLDTGDILLVEETKIGENETSGELFDRLRELGAQVLVETL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++E K +PQ N G SYA ++ + +V+DWS SA+ I + +P+P A + Y
Sbjct: 181 RQLEAGTLK--RRPQGNEGASYASMLSRELSVIDWSRSAQEIHNLVRGLSPWPVACSVY- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKI 239
+ K +KI++ ES +PG +L LV CG+N +KL+ +Q K++
Sbjct: 238 ----QGKRIKIYQTQVCGDES-GEPGQVLP---GKDFLVCCGQNTALKLMTVQYEGGKRM 289
Query: 240 SATEFING 247
++F+ G
Sbjct: 290 DGSDFLRG 297
>gi|451972171|ref|ZP_21925382.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus E0666]
gi|451931836|gb|EMD79519.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus E0666]
Length = 315
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL PVK+ AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAGRGKKLAAPPVKQLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP S K + ++A+ +T KL
Sbjct: 65 QPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I K Q + +YA + K EA ++W+ A I R + AFNP+P +++
Sbjct: 185 ADIA--AGKAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTIL + GI V G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTILQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|421562338|ref|ZP_16008165.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2795]
gi|421907681|ref|ZP_16337556.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha704]
gi|433493706|ref|ZP_20450782.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM762]
gi|393291350|emb|CCI73555.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha704]
gi|402342994|gb|EJU78149.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2795]
gi|432231884|gb|ELK87539.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM762]
Length = 308
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + T G +L+ + +G++V C +N +K+ ELQ +++
Sbjct: 237 VEYQG--KLMKIRRAEVVAQQGTA--GEVLSCSA-DGLVVACDENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|297180809|gb|ADI17015.1| methionyl-tRNA formyltransferase [uncultured Vibrionales bacterium
HF0010_22E23]
Length = 314
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 141/313 (45%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA+ L L +S H +V + T+PD +GRG KL S VK A++H++ +
Sbjct: 5 LKIIFAGTPDFAASHLAALLSSHHEVVAVYTQPDRPAGRGKKLTPSDVKALAVEHNLPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE---DT-------------- 100
QP+SLK E + L IE DIM+V+ ILP+ DT
Sbjct: 65 QPVSLK--------NEEAQQELATIEADIMVVVAYGLILPKAVLDTPRLGCINVHGSILP 116
Query: 101 ----SLTLQNKL---EKLSKILIIDTIKKIEY-DM---TKLFFKPQSNIGESYAPL---- 145
+ +Q + +K + + I+ + ++ DM T++ PQ Y L
Sbjct: 117 KWRGAAPIQRAVWAGDKETGVTIMQMDEGLDTGDMLKITRVDIDPQETSASLYQRLADIG 176
Query: 146 ------------------IKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
+K+++A+ +DW LSA I R I AFN +P
Sbjct: 177 PQALVECLDDISAGKTEAVKQDDALATHAKKLSKEEARIDWQLSAVEIERCIRAFNSWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+Y+ N +K+W + E+++ PGT++ + GI V G V+ L LQ
Sbjct: 236 -MSYFTVGDNN---VKVWASKVTHSETSEAPGTVIATS-KRGIDVATGDGVLSLTSLQPP 290
Query: 235 NKKKISATEFING 247
KK +SA + +N
Sbjct: 291 GKKAMSAADILNA 303
>gi|421080413|ref|ZP_15541346.1| Methionyl-tRNA formyltransferase [Pectobacterium wasabiae CFBP
3304]
gi|401704845|gb|EJS95035.1| Methionyl-tRNA formyltransferase [Pectobacterium wasabiae CFBP
3304]
Length = 315
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFS-------------- 46
++IIFAGT AA LD L +S H +V + T+PD SGRG KL S
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHEVVGVFTQPDRPSGRGNKLTPSPVKVLAEQHNIPVF 64
Query: 47 ------PVKKYALKHSIK------------IIQPI-------SLKLNGKYHKI------- 74
P + A+ ++ + QP+ + ++G +
Sbjct: 65 QPKSLRPAENQAMVEALSADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A ++ + ++ D+ + G IL +DTS TL +KL +L +++T+
Sbjct: 125 QRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILSQDTSATLYDKLAELGPRGLLETL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ + Q++ +YA + K EA LDW LSA+ + R I AFNP+P +Y+I
Sbjct: 185 EQLA--TGSAVAEAQNDALATYAEKLSKEEARLDWQLSAEQLERCIRAFNPWP--VSYFI 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+WKA ++ +PGTI+ GI V V+ + ELQ KK +S
Sbjct: 241 V---DEQPVKVWKAEVITKSHGLQPGTIIQAE-KQGIQVATANGVLNIQELQPAGKKVMS 296
Query: 241 ATEFIN 246
A + +N
Sbjct: 297 AQDLLN 302
>gi|269967000|ref|ZP_06181070.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus 40B]
gi|269828394|gb|EEZ82658.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus 40B]
Length = 315
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 137/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL PVK+ ALKH+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAGRGKKLAAPPVKQLALKHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP S K + ++A+ +T KL
Sbjct: 65 QPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++ K Q + +YA + K EA ++W+ A I R + AFNP+P +++
Sbjct: 185 --VDIAAGKAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI V G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|395233957|ref|ZP_10412191.1| methionyl-tRNA formyltransferase [Enterobacter sp. Ag1]
gi|394731579|gb|EJF31338.1| methionyl-tRNA formyltransferase [Enterobacter sp. Ag1]
Length = 315
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 139/306 (45%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYA-------- 52
++IIFAGT AA LD L +S+H +V + T+PD +GRG KL PVK A
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSQHQVVGVFTQPDRPAGRGKKLMPGPVKVLAEEKGIPVF 64
Query: 53 ------------------------LKHSIKIIQPI-------SLKLNG------------ 69
+ + + + QP+ + ++G
Sbjct: 65 QPATLRKAENQQLIADLNADVMVVVAYGLILPQPVLDMPRLGCVNVHGSLLPRWRGAAPI 124
Query: 70 KYHKIANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
+ A +T + ++ DI + G I EDTS TL +KL L ++DT+
Sbjct: 125 QRSLWAGDTETGVTIMQMDIGLDTGDMLYKLSCPIEAEDTSGTLYDKLAGLGPKGLLDTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ + ++ + +YA + K EA ++W+LSA + R I AFNP+P ++
Sbjct: 185 EQLANGTATPEVQDEALV--TYAEKLSKEEARINWNLSAVQLERCIRAFNPWP---MSWL 239
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ LK+W+A A++ ++ PGTIL + GI V + ++ L ELQ KK +
Sbjct: 240 EIDGQP--LKVWRASAINTQTNSAPGTILATS-KQGIQVATAEGILNLEELQPAGKKAMK 296
Query: 241 ATEFIN 246
A + +N
Sbjct: 297 AQDLLN 302
>gi|381165807|ref|ZP_09875034.1| Methionyl-tRNA formyltransferase [Phaeospirillum molischianum DSM
120]
gi|380685297|emb|CCG39846.1| Methionyl-tRNA formyltransferase [Phaeospirillum molischianum DSM
120]
Length = 304
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 134/308 (43%), Gaps = 75/308 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT A AILD+L ++ H IV + ++P +GRG K SPV +A + +
Sbjct: 1 MKLVFMGTPDFAVAILDSLLSAGHEIVAVYSQPPRPAGRGHKEQPSPVHAFAATRGLAVR 60
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNKIEFDIMI 91
P++L+ L+ H N LL + I
Sbjct: 61 TPLTLRSPEEQAAFAALNADAAIVAAYGLILPQAVLDAPRHGCLNVHASLLPRWRGAAPI 120
Query: 92 VMGILPED-------------------------------TSLTLQNKLEKLSKILIIDTI 120
IL D T+ L ++L + LI+ +
Sbjct: 121 QRAILAGDVESGVTIMQMEAGLDTGPILLLRSLPLPPDVTAPWLHDRLAEQGAGLIVTAL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+K+ D T L +PQ G YA + ++EA +DW+L A+ I R++ A NP+PG +
Sbjct: 181 EKL-GDGT-LTARPQPEEGTIYAAKLTRDEARIDWTLPARQIERQVRALNPWPG-----V 233
Query: 181 SYQNKKKFLKIWKAHALSIESTK-KPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ + +K+ A ++E+ + +PGT+L+ +G+ + CG + ++ L +Q+ K +
Sbjct: 234 WFDLGGERIKVLNA---TVETGQGQPGTVLD----DGLRIACGTDSLRPLRVQRPGKAPM 286
Query: 240 SATEFING 247
A E + G
Sbjct: 287 EAIEMLRG 294
>gi|407698283|ref|YP_006823070.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Black
Sea 11']
gi|407247430|gb|AFT76615.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Black
Sea 11']
Length = 316
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 62/303 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L SEH ++ + T+PD +GRG KL SPVK A +++I +
Sbjct: 5 LKVIFAGTPDFAAKHLSALLESEHEVIAVYTQPDRPAGRGKKLTASPVKVLAEENAIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMI--------------VMG-ILPE------- 98
QP SLK ++A+ L+ + + +++ V G ILP+
Sbjct: 65 QPQSLKAQDAQEELASLNADLMVVVAYGLILPTAVLNAPKLGCINVHGSILPKWRGAAPI 124
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG-------- 139
+T +T+ E L +L I + D + ++ + +G
Sbjct: 125 QRSIWAGDAETGVTIMQMDEGLDTGDMLHIAILPITPEDTSATLYEKLAELGPQALVEVV 184
Query: 140 ---ESYAPL------------IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
+ Y P + K EA+++W+ A+ I R I AFNP+P A Q
Sbjct: 185 NEFDHYTPTKQDDSQATYAKKLSKEEALINWADDAEQIERNIRAFNPWPVA-----WMQV 239
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+ + +K+W A+ + + PGT++ N GI + G++ + + LQ KK + A++
Sbjct: 240 EDQNIKVWSANVVPLNKDVTPGTVIGAN-KEGITIATGRDALCITSLQIPGKKALPASDV 298
Query: 245 ING 247
IN
Sbjct: 299 INA 301
>gi|433659117|ref|YP_007276496.1| Methionyl-tRNA formyltransferase [Vibrio parahaemolyticus BB22OP]
gi|432509805|gb|AGB11322.1| Methionyl-tRNA formyltransferase [Vibrio parahaemolyticus BB22OP]
Length = 315
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 135/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL PVK+ AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAGRGKKLAAPPVKQLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP S K + ++A+ +T KL
Sbjct: 65 QPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I K Q + +YA + K EA ++W+ A I R + AFNP+P +
Sbjct: 185 ADIA--AGKAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSH---- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ ++ +K+W++ S K GTI+ + GI V G V+ L +LQ KK +S
Sbjct: 239 -FEAEENSIKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|116621864|ref|YP_824020.1| methionyl-tRNA formyltransferase [Candidatus Solibacter usitatus
Ellin6076]
gi|122254457|sp|Q023V5.1|FMT_SOLUE RecName: Full=Methionyl-tRNA formyltransferase
gi|116225026|gb|ABJ83735.1| methionyl-tRNA formyltransferase [Candidatus Solibacter usitatus
Ellin6076]
Length = 311
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT A L+ + + H + +LT+PD GRG SPVK+ AL S+++
Sbjct: 1 MRLVFLGTPAFAVPTLEAVVRAGHEVAAVLTQPDRPRGRGQNPAASPVKQAALALSLEVY 60
Query: 61 QPISLK-------LNG------------------------------------KYHK---- 73
QP ++ L G KY
Sbjct: 61 QPERVRRPEPVEFLRGIGARAMVIVGYGQIIPQNVIDLAPLGIINVHASLLPKYRGAGPI 120
Query: 74 ----IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
+ ET + + D + G I PE+ ++ L +L L L++ T+
Sbjct: 121 QWSIVNGETRTGVTTMRIDAGLDTGDMLLKRDTEIGPEENAMELGARLAVLGADLLVKTL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E + + Q + + APL+KK + +DW+ A I ++ P+PGA+T +
Sbjct: 181 AGLEAGT--IVPEKQDDSQATLAPLLKKEDGRIDWAQPALAIHNRVRGLQPWPGAQTTF- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ + L IWK+ ++ PG +L +LV G+ ++LLE+Q+ +K+I
Sbjct: 238 ----RGQPLHIWKSRPVTAAQAAAPGAVLRTRP---LLVASGEGALELLEVQQEGRKRIP 290
Query: 241 ATEFING 247
A +F NG
Sbjct: 291 AADFANG 297
>gi|153837688|ref|ZP_01990355.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AQ3810]
gi|260901338|ref|ZP_05909733.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AQ4037]
gi|417321568|ref|ZP_12108104.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus 10329]
gi|149748978|gb|EDM59805.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AQ3810]
gi|308109873|gb|EFO47413.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AQ4037]
gi|328471168|gb|EGF42070.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus 10329]
Length = 315
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL PVK+ AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAGRGKKLAAPPVKQLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP S K + ++A+ +T KL
Sbjct: 65 QPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I K Q + +YA + K EA ++W+ A I R + AFNP+P +++
Sbjct: 185 ADIA--AGKAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI V G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|375267071|ref|YP_005024514.1| methionyl-tRNA formyltransferase [Vibrio sp. EJY3]
gi|369842391|gb|AEX23535.1| methionyl-tRNA formyltransferase [Vibrio sp. EJY3]
Length = 315
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 134/306 (43%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKNIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + +A+ +T KL
Sbjct: 65 QPENFKSDEAKQALADLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLADLGPQALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + K Q + +YA + K EA ++WS A I R + AFNP+P +++
Sbjct: 185 ADIAAN--KAVPVKQDDELANYAKKLSKEEARINWSDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI V G V+ L +LQ KK +
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGVLVLEQLQVPGKKAMP 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|226704304|sp|B8CHB1.1|FMT_SHEPW RecName: Full=Methionyl-tRNA formyltransferase
gi|212554449|gb|ACJ26903.1| Methionyl-tRNA formyltransferase [Shewanella piezotolerans WP3]
Length = 321
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 141/313 (45%), Gaps = 82/313 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ +IFAGT AA L L S+H ++ + T+PD +GRG KL SPVK AL++ I ++
Sbjct: 4 LNVIFAGTPDFAARHLQALIESQHKVIAVYTQPDRPAGRGKKLQSSPVKALALENDIPVL 63
Query: 61 QPISLKLNGKYHKIANET-HKLLNKIEFDIMIVMG-----------------------IL 96
QP SL+ +ET + L + DIM+V+ IL
Sbjct: 64 QPKSLR---------DETAQQELTALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSIL 114
Query: 97 PE----------------DTSLT-LQNKLEKLSKILIIDTIKKIEYDMT------KLFFK 133
P +T +T +Q + + +++ T KIE T KL +
Sbjct: 115 PRWRGAAPIQRALWAGDAETGVTIMQMDIGLDTGDMLLKTQLKIEDTDTSATLYEKLADQ 174
Query: 134 PQSNIGESYA-------PLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFP 173
S + E+ A P K++E++ +DWS SA+ + R+I AFNP+P
Sbjct: 175 GPSALVEALAGIAADTLPAEKQDESLANYAEKLSKEEAQIDWSKSAEALWREIRAFNPWP 234
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
YQ+ +K+W++H ST GT+++ + NGI V G V+ + +Q
Sbjct: 235 -----VSHYQHAGNTIKVWQSHVSEKTSTAAAGTVISAD-KNGIDVATGNGVLTITSMQL 288
Query: 234 NNKKKISATEFIN 246
KK +S + +N
Sbjct: 289 PGKKPLSVADILN 301
>gi|28899817|ref|NP_799422.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|260362017|ref|ZP_05775022.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus K5030]
gi|260876496|ref|ZP_05888851.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260897447|ref|ZP_05905943.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus Peru-466]
gi|31340069|sp|Q87KD4.1|FMT_VIBPA RecName: Full=Methionyl-tRNA formyltransferase
gi|28808069|dbj|BAC61306.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308087883|gb|EFO37578.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308090353|gb|EFO40048.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308114173|gb|EFO51713.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus K5030]
Length = 315
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL PVK+ AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAGRGKKLAAPPVKQLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP S K + ++A+ +T KL
Sbjct: 65 QPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I K Q + +YA + K EA ++W+ A I R + AFNP+P +++
Sbjct: 185 ADIA--AGKAVPVKQDDELANYAKKLNKEEARINWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI V G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|456064439|ref|YP_007503409.1| Methionyl-tRNA formyltransferase [beta proteobacterium CB]
gi|455441736|gb|AGG34674.1| Methionyl-tRNA formyltransferase [beta proteobacterium CB]
Length = 340
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 91/158 (57%), Gaps = 10/158 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PE+TS +L ++L L L++ T+ +++ +T + PQ+ G +YA I K+EA +D
Sbjct: 170 ITPEETSASLHDRLAALGAELMVKTLNELDQGLT-VTRTPQATEGITYAEKILKSEAEID 228
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH---ALSIESTKKPGTILNV 211
W LSA I R+I AFNPFPG+ + Q LK+W + + PG +L
Sbjct: 229 WRLSAAEIDRRIRAFNPFPGSTSSLGGEQ-----LKLWSSRLSDKVQTHQDTTPGQVLGF 283
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCI 249
+ NG+ V CG+ VI++LE+QK K+I+A+ I+ +
Sbjct: 284 S-GNGVYVQCGEGVIEILEMQKPGGKRIAASLCISSGV 320
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT AA + + + H IVL LT+PD +GRGM L SPVK +A + +I ++
Sbjct: 1 MRIVFAGTPEFAAQAMRAIEKAGHQIVLALTQPDRRAGRGMHLQASPVKIFAQEKNIPVL 60
Query: 61 QPISLKLNG---KYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SLK N + A E ++ L+ I+FD M+V+ ILP+D
Sbjct: 61 QPESLKQNHADLQKRAAAQEAYQYLSGIDFDAMVVVAYGLILPQD 105
>gi|227115519|ref|ZP_03829175.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 315
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
++IIFAGT AA LD L +S H +V + T+PD +GRG KL F
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHEVVGVFTQPDRPAGRGNKLTPSPVKVLAEQQSIPVF 64
Query: 46 SP---------VKKYALKHSIKII--------QPI-------SLKLNGKYHKI------- 74
P AL + ++ QP+ + ++G +
Sbjct: 65 QPKSLRPEENQAMVQALNADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A ++ + ++ D+ + G IL +DTS TL +KL +L +++T+
Sbjct: 125 QRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILAQDTSATLYDKLAELGPRGLLETL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ D + + + Q++ +YA + K EA LDW LSAK + R I AFNP+P +Y+I
Sbjct: 185 EQL-ADGSAVA-ETQNDALATYAEKLSKEEARLDWLLSAKQLERCIRAFNPWP--VSYFI 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+WKA A++ +PGTI+ + GI + ++ + ELQ KK +
Sbjct: 241 V---DEQPVKVWKAEAIAKAHGSQPGTIIQAD-KQGIQIATADGILNIQELQPAGKKVMG 296
Query: 241 ATEFIN 246
A + +N
Sbjct: 297 AQDLLN 302
>gi|323493838|ref|ZP_08098956.1| methionyl-tRNA formyltransferase [Vibrio brasiliensis LMG 20546]
gi|323311972|gb|EGA65118.1| methionyl-tRNA formyltransferase [Vibrio brasiliensis LMG 20546]
Length = 315
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 139/306 (45%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LKIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKNIALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +++ +
Sbjct: 125 QRSIWAGDKETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPQALVECL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + T + K + +YA + K EA ++WS A I R + AFNP+P +++
Sbjct: 185 SDI-ANGTAVAEKQDDELA-NYAKKLSKEEARINWSDEATHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTIL + +GI V G V+ L +LQ KK +
Sbjct: 241 AAENS---IKVWQSRVEEQTSAKPAGTILQAD-KSGIHVATGNGVLVLEQLQIPGKKAMP 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|91226302|ref|ZP_01261142.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus 12G01]
gi|91189313|gb|EAS75592.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus 12G01]
Length = 315
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL PVK+ AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAGRGKKLAAPPVKQLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP S K + ++A+ +T KL
Sbjct: 65 QPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++ K Q + +YA + K EA ++W+ A I R + AFNP+P +++
Sbjct: 185 --VDIAAGKAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI V G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|254229998|ref|ZP_04923399.1| methionyl-tRNA formyltransferase [Vibrio sp. Ex25]
gi|262392830|ref|YP_003284684.1| methionyl-tRNA formyltransferase [Vibrio sp. Ex25]
gi|151937500|gb|EDN56357.1| methionyl-tRNA formyltransferase [Vibrio sp. Ex25]
gi|262336424|gb|ACY50219.1| methionyl-tRNA formyltransferase [Vibrio sp. Ex25]
Length = 315
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL PVK+ AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAGRGKKLAAPPVKQLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP S K + ++A+ +T KL
Sbjct: 65 QPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + Q + +YA + K EA ++W+ A I R + AFNP+P +++
Sbjct: 185 ADIATGKAEPV--KQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI V G V+ L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|253690151|ref|YP_003019341.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259646044|sp|C6DFR6.1|FMT_PECCP RecName: Full=Methionyl-tRNA formyltransferase
gi|251756729|gb|ACT14805.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 315
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 143/307 (46%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFS-------------- 46
++IIFAGT AA LD L +S H +V + T+PD +GRG KL S
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHEVVGVFTQPDRPAGRGNKLTPSPVKVLAEQHNIPIF 64
Query: 47 ------PVKKYALKHSIK------------IIQPI-------SLKLNGKYHKI------- 74
P + A+ ++ + QP+ + ++G +
Sbjct: 65 QPKSLRPAENQAMVQALDADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A ++ + ++ D+ + G ILP+DTS TL +KL +L +++T+
Sbjct: 125 QRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILPQDTSATLYDKLAELGPRGLLETL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + D + + + Q++ +YA + K EA L+W LSA+ + R I AFNP+P +
Sbjct: 185 ELL-ADGSAVA-EAQNDALATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWP------V 236
Query: 181 SYQN-KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
SY ++ +K+WKA ++ + PGTIL + GI V ++ + ELQ KK +
Sbjct: 237 SYFTVDEQPVKVWKAEVITTAHSTLPGTILQAD-KQGIQVATAVGILNIQELQPAGKKVM 295
Query: 240 SATEFIN 246
SA + +N
Sbjct: 296 SAQDLLN 302
>gi|264680863|ref|YP_003280773.1| methionyl-tRNA formyltransferase [Comamonas testosteroni CNB-2]
gi|262211379|gb|ACY35477.1| methionyl-tRNA formyltransferase [Comamonas testosteroni CNB-2]
Length = 321
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 13/161 (8%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M V+ LP DT+ +LQ+KL L LI++ ++ L PQ G SYA I
Sbjct: 155 MCVIERLPIAAGDTTASLQDKLAALGGRLIVEALEMAACG--GLSRTPQPADGVSYAHKI 212
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
+K E+++DWS SA+ I R++ AFNPFPG T + +K+W+A A + + PG
Sbjct: 213 EKAESLIDWSESAEVIARRLRAFNPFPGGATSL-----GGEAIKVWEAEAQ--QGSGAPG 265
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
++L+ + G+ V CG V+ + LQ+ K+++A +F+ G
Sbjct: 266 SVLSAD-ARGVRVACGSGVLNMTLLQRAGGKRLAAGDFLRG 305
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT A L++L + + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MKVIFAGTPEFARVALESLLAAGFEVPLVLTQPDRPAGRGMKLQASPVKQCALEHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L+GKY + A ++ + D+M+V ILP+
Sbjct: 61 QPLSLRLDGKYPEDAAAAKAAIDAAQADVMVVAAYGLILPQ 101
>gi|163803317|ref|ZP_02197195.1| methionyl-tRNA formyltransferase [Vibrio sp. AND4]
gi|159172887|gb|EDP57726.1| methionyl-tRNA formyltransferase [Vibrio sp. AND4]
Length = 315
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 136/305 (44%), Gaps = 66/305 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDHAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKI 123
+ ++ DI M+ + LP + S T + EKL+ L D + +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAG-LGPDALIEC 183
Query: 124 EYDMTKLFFKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
D+ +P Q + +YA + K EA ++W+ A I R + AFNP+P +
Sbjct: 184 LADIATGKAEPVKQDDEQANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSH----- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
++ + +K+W++ S K GTIL + GI VV G V+ L +LQ KK +S
Sbjct: 239 FETAENSIKVWQSRVEEQTSDKPAGTILQAD-KTGIYVVTGNGVLVLEQLQVPGKKAMSV 297
Query: 242 TEFIN 246
+ +N
Sbjct: 298 QDILN 302
>gi|94676461|ref|YP_588857.1| methionyl-tRNA formyltransferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123260543|sp|Q1LT57.1|FMT_BAUCH RecName: Full=Methionyl-tRNA formyltransferase
gi|94219611|gb|ABF13770.1| methionyl-tRNA formyltransferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 311
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 137/313 (43%), Gaps = 82/313 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT AA L L NS + +V +LT+PD +GRG L S VK+ A+KH++ +
Sbjct: 1 MRILFAGTPSFAAHYLSVLINSPYKVVGVLTQPDRAAGRGNYLATSAVKQLAIKHNLPVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
QP L N H ++ I DI++V+ I+P+D
Sbjct: 61 QPEYLHENNGKH--------IIEHISVDILVVVAYGMIIPQDMLMFPKLGGINIHGSLLP 112
Query: 100 ------------------TSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKL- 130
T +T+ + L KIL +DT + + K+
Sbjct: 113 RWRGAAPIQRALWAGDIKTGITIIQMDDGLDTGPILYQVACKILPVDTSTTLYAKLAKIG 172
Query: 131 ----------------FFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+PQ+N +YA + K EA +DW L+A + R I AFNP+P
Sbjct: 173 STALLATLKQIITGSQVIEPQNNKFATYARKLNKKEARIDWQLTANQLERCIRAFNPWP- 231
Query: 175 AKTYYIS-YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
IS ++ + +K+W A I PGTIL+V+ GI + GK I + ++Q
Sbjct: 232 -----ISFFKIRDTIIKVWGAQIDDINYHHIPGTILSVD-PVGIKIATGKGAIIITQIQL 285
Query: 234 NNKKKISATEFIN 246
K++ +F+N
Sbjct: 286 AGTKQMPVKDFLN 298
>gi|329913546|ref|ZP_08275971.1| Methionyl-tRNA formyltransferase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545310|gb|EGF30552.1| Methionyl-tRNA formyltransferase [Oxalobacteraceae bacterium
IMCC9480]
Length = 323
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ +L ++L L LI+D ++++E L Q G YA I K EA LD++
Sbjct: 166 DDTTGSLHDRLATLGGKLIVDALRQLERG--PLLATEQPETGTCYAAKISKEEAALDFAQ 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A+ + RKI AF+P PGA +KIW+A ++ PG I+ + +G+
Sbjct: 224 PAELLARKIRAFHPAPGASALIGGVA-----IKIWRAEVVACSELALPGEIIAADAVSGL 278
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
++ CG + ++L ELQK K++ A+EF+ G
Sbjct: 279 VIACGHSALRLTELQKPGGKRLPASEFLKG 308
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AA L ++ + +I L+LT+PD +GRGM+L+ S VK++AL H I +
Sbjct: 1 MKIIFAGTPEFAAVALAAIHAAGFDIPLVLTQPDRPAGRGMQLHASAVKQFALAHGIPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+L+GKY +A+E LL D+M+V ILP
Sbjct: 61 QPVSLRLDGKYPDVASEADALLRATAHDVMVVAAYGLILP 100
>gi|414152956|ref|ZP_11409283.1| Methionyl-tRNA formyltransferase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455338|emb|CCO07185.1| Methionyl-tRNA formyltransferase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 317
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 131/308 (42%), Gaps = 69/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI--- 57
M+I+F GT AA L L + +V ++T+PD GRG +L PVK+ AL + +
Sbjct: 1 MRIVFMGTPDFAAYSLRALLAAGKQVVAVVTQPDKPKGRGKQLQPPPVKQLALANHLPVL 60
Query: 58 ----------------------------KIIQPISLKLNGK------------------- 70
KI+ P L L +
Sbjct: 61 QPDSIRTQEFVQNLQELRPDCLVVVAYGKILPPAVLALPPRGCINLHASLLPRYRGAAPI 120
Query: 71 -YHKIANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
+ I ET + + D + G I P+DT L ++L + L++ TI
Sbjct: 121 HWAVINGETETGVTTMFMDQGMDTGDMILKQKVIIGPDDTVGMLHDQLALVGAELLVKTI 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E + PQ + +YAP+++K ++ W A+ I ++ NP+PG T +
Sbjct: 181 DLLEQGLAP--RTPQDHSQATYAPMLQKEHELIHWDRPARDIHNQVRGMNPWPGTYTTW- 237
Query: 181 SYQNKKKFLKIWKAHALSIES-TKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ K LKIW+ +S E+ +PGT+L +GILV G+ + + ELQ KK+
Sbjct: 238 ----EDKILKIWRTREISSETVAAQPGTVLEAG-SSGILVQTGRGHLLISELQLQGSKKM 292
Query: 240 SATEFING 247
+A +F+ G
Sbjct: 293 AAEDFLRG 300
>gi|295675126|ref|YP_003603650.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1002]
gi|295434969|gb|ADG14139.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1002]
Length = 331
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL ++L + LI+ + ++E KL PQ G +YA I K+EA LDW
Sbjct: 170 DDTTATLHDRLAEAGAQLIVHALIELERS-GKLASTPQPADGVTYAEKIAKHEAALDWRR 228
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE---STKKPGTILNVNFH 214
A+ + R++ AF+PFPG + +KIW A A++ S+K PGTI V+
Sbjct: 229 PAEALARQVRAFDPFPGGAGTL----DDGNTVKIWAATAVASPASGSSKTPGTITEVS-P 283
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G+LV C + ++L +LQK K++ EF+ G
Sbjct: 284 DGVLVACDEGALRLTQLQKPGGKRLPVREFLAG 316
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL SPVK+YA +H + +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHRAGFAVPLVLTQPDRPAGRGMKLQASPVKRYAQEHGLAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY + A + L D+M+V ILP++
Sbjct: 65 QPTSLRRAGKYPEEAAAGIEQLRATPHDVMVVAAYGLILPQE 106
>gi|269962645|ref|ZP_06176990.1| methionyl-tRNA formyltransferase [Vibrio harveyi 1DA3]
gi|269832568|gb|EEZ86682.1| methionyl-tRNA formyltransferase [Vibrio harveyi 1DA3]
Length = 315
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + Q + +YA + K EA ++W+ A I R + AFNP+P +++
Sbjct: 185 ADIATGQAEPV--KQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI V G + L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGTLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|375107573|ref|ZP_09753834.1| methionyl-tRNA formyltransferase [Burkholderiales bacterium
JOSHI_001]
gi|374668304|gb|EHR73089.1| methionyl-tRNA formyltransferase [Burkholderiales bacterium
JOSHI_001]
Length = 320
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 73/311 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I FAGT AAA L L +I L+LT+PD +GRG+KL S VK AL+H + +
Sbjct: 1 MRIGFAGTPEFAAAALQRLLAEGFDIGLVLTQPDRPAGRGLKLQPSAVKALALQHGLALA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+L+GKY + A L D ++V ILP
Sbjct: 61 QPRSLRLDGKYPEDARAALAALQDARLDALVVAAYGLILPRWVLELPRLGCLNIHGSLLP 120
Query: 99 -----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
T +T+ E L +L++ I D T + +G
Sbjct: 121 RWRGAAPIHRAIEAGDGRTGITIMQMDEGLDTGDMLLVKDIAIAPDDSTATLHDKLAALG 180
Query: 140 -ESYAPLIKKNEA------------------------VLDWSLSAKTIMRKINAFNPFPG 174
E P +++ +A +DW A+ I R++ AF+PFPG
Sbjct: 181 AELIVPALRQAQAGSLVRTRQPEAGVTYAHKIEKSEAGIDWRQDARQIERRLRAFDPFPG 240
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A +Q + +K+W+A + + PGT++ H +++ CG+ + +ELQ+
Sbjct: 241 AH-----FQLGAEAIKLWRALVVP-DVAAAPGTVVAHPAHP-LVIACGEGGLAPMELQRP 293
Query: 235 NKKKISATEFI 245
K++ F+
Sbjct: 294 GGKRLPVAAFV 304
>gi|77166462|ref|YP_344987.1| methionyl-tRNA formyltransferase [Nitrosococcus oceani ATCC 19707]
gi|254435811|ref|ZP_05049318.1| methionyl-tRNA formyltransferase [Nitrosococcus oceani AFC27]
gi|123593231|sp|Q3J6T9.1|FMT_NITOC RecName: Full=Methionyl-tRNA formyltransferase
gi|76884776|gb|ABA59457.1| methionyl-tRNA formyltransferase [Nitrosococcus oceani ATCC 19707]
gi|207088922|gb|EDZ66194.1| methionyl-tRNA formyltransferase [Nitrosococcus oceani AFC27]
Length = 323
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+FAGT + AA IL L ++++I + T+PD SGRG + SPVK A+ H + + QP
Sbjct: 7 ILFAGTPVFAAIILRRLLEAKYHIGAVYTQPDRPSGRGRRPTPSPVKDIAITHQLPLYQP 66
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFDIMI---VMGILPEDT-------------SLTLQN 106
+LK G ++A L+ + +++ V+ I P + +Q
Sbjct: 67 ATLKDKGSQAQLAALAPDLMVVAAYGLILPATVLQIPPLGCINVHASLLPRWRGAAPIQR 126
Query: 107 KL---EKLSKILII----------------------DTIKKIEYDMTKL----------- 130
L +K++ I I+ DT + + +L
Sbjct: 127 ALLAGDKVTGISIMQMDAGLDTGPVVHTARYPIHPKDTAATVHDQLAELGAEALLQCLPS 186
Query: 131 FFKPQSNIG----ESYA---PLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
+ ++NI ES A P I+K EA LDWS A + R++ AFNP+P A+T Q
Sbjct: 187 LLEKKANIATLQDESQACYAPKIRKEEAWLDWSQPAVLLERQVRAFNPWPVAQT-----Q 241
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATE 243
K L++W A AL+ + PGT+L V+ GI V G ++LLE+Q K+ ++ +
Sbjct: 242 IGGKTLRVWSAAALAQTANALPGTLLAVH-KTGIDVATGNGTLRLLEVQLAGKRVMTVQD 300
Query: 244 FIN 246
++N
Sbjct: 301 YLN 303
>gi|27364479|ref|NP_760007.1| methionyl-tRNA formyltransferase [Vibrio vulnificus CMCP6]
gi|31340072|sp|Q8DDE4.1|FMT_VIBVU RecName: Full=Methionyl-tRNA formyltransferase
gi|27360598|gb|AAO09534.1| methionyl-tRNA formyltransferase [Vibrio vulnificus CMCP6]
Length = 315
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAAQHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + +A+ +T KL
Sbjct: 65 QPENFKSDEAKQALADLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS T+ +KL KL +++++ +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIDASDTSATMYDKLAKLGPVVLVECL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I T + K Q + +YA + K EA ++W A+ I R + AFNP+P +
Sbjct: 185 ADIAAG-TAIAIK-QDDERANYAKKLSKEEARINWQDDAEHIERCVRAFNPWPMSH---- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ + +K+W++ + GTIL + +GI V G + L ++Q KK +
Sbjct: 239 -FEVAENSIKVWQSRVEASSHDAPAGTILKAD-KSGIYVATGHGCLVLEQIQIPGKKAMP 296
Query: 241 ATEFING 247
+ +N
Sbjct: 297 VQDVLNA 303
>gi|424048349|ref|ZP_17785902.1| methionyl-tRNA formyltransferase [Vibrio cholerae HENC-03]
gi|408882588|gb|EKM21394.1| methionyl-tRNA formyltransferase [Vibrio cholerae HENC-03]
Length = 315
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQQLADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL L +ID +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIDCL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I + Q + +YA + K EA ++W+ A I R + AFNP+P +++
Sbjct: 185 ADIATGKAEPV--KQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWP--MSHFE 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +N +K+W++ S K GTI+ + GI V G + L +LQ KK +S
Sbjct: 241 AAENS---IKVWQSRVAEQTSDKPAGTIVQAD-KTGIYVATGNGTLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|451812490|ref|YP_007448944.1| methionyl-tRNA formyltransferase [Candidatus Kinetoplastibacterium
galatii TCC219]
gi|451778392|gb|AGF49340.1| methionyl-tRNA formyltransferase [Candidatus Kinetoplastibacterium
galatii TCC219]
Length = 318
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 138/314 (43%), Gaps = 77/314 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGTS A L +L + +NI +LTKPDL SGRG++ VK+ A+ ++I +I
Sbjct: 1 MRILFAGTSEFAYDHLLSLISLGYNIHTVLTKPDLPSGRGLEKKIGIVKRLAMINNINVI 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP +L + E L I DIMIV+ ILP
Sbjct: 61 QPDTLNKDNLSANFICE----LKDIRPDIMIVVSYGMILPRWILDIPRFGCVNVHASLLP 116
Query: 99 --DTSLTLQNKLEKLSKILIIDTIKKIE-YDMTKLFFK---------------------- 133
+ +Q +E K I IK E D + FK
Sbjct: 117 RWRGAAPIQRAIESGDKYTGITVIKMDEGLDTGDVLFKSSIPILNHYSALDLQKLLSEEG 176
Query: 134 -----------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAK 176
PQS +YA IKKNEA+LD S A ++ R+I AFNP+PGA
Sbjct: 177 SYAIDYVLKNIETIIPEPQSTSNITYAKKIKKNEALLDLSDDAISLSRRIRAFNPYPGA- 235
Query: 177 TYYISYQNKKKFLKIWKAHAL---SIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
I N + LK+W A L SIE PG+I + + G+ V + +++L ELQ+
Sbjct: 236 --IIRINNFTESLKVWDAIPLENSSIEGV--PGSIDSFD-DGGVNVFTKRGILRLTELQR 290
Query: 234 NNKKKISATEFING 247
+ S +FING
Sbjct: 291 LGSGRSSIKDFING 304
>gi|332289286|ref|YP_004420138.1| methionyl-tRNA formyltransferase [Gallibacterium anatis UMN179]
gi|330432182|gb|AEC17241.1| methionyl-tRNA formyltransferase [Gallibacterium anatis UMN179]
Length = 318
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 136/316 (43%), Gaps = 82/316 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L S+H ++ + T+PD +GRG KL S VK+ AL H++ I
Sbjct: 4 LNIIFAGTPDFAAQHLQALLASQHQVIAVYTQPDKPAGRGKKLQPSAVKQLALAHNLPIF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP SL+ E + L ++ D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQQQLAQLNADVMVVVAYGLILPKAVLAMPRLGCLNVHGSLLP 115
Query: 98 ----------------EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTK------LFFK-- 133
E T +T+ E L D + K+ +++K L+ K
Sbjct: 116 RWRGAAPIQRAIWAGDEQTGVTIMQMDEGLD---TGDMLHKVSCEISKDETSSSLYQKLA 172
Query: 134 ---PQS------NIGES-YAPLIKKN------------EAVLDWSLSAKTIMRKINAFNP 171
PQ+ ++ E Y P ++N EA LDWSL A + R I AFNP
Sbjct: 173 TLAPQALIEVLDHLEEGKYPPQAQQNEFSNYAEKLSKEEAKLDWSLPAVQLERCIRAFNP 232
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
+P + Q + LK+++A L + GT+L N GI + V+ + +L
Sbjct: 233 WPISWLQTRDAQGNNQILKVYQATVLP-HQNQTAGTVLQAN-KQGIQIATADGVLNITQL 290
Query: 232 QKNNKKKISATEFING 247
Q KK ++ +F+NG
Sbjct: 291 QPAGKKPMAVQDFLNG 306
>gi|386389931|ref|ZP_10074729.1| methionyl-tRNA formyltransferase [Haemophilus paraphrohaemolyticus
HK411]
gi|385694371|gb|EIG24979.1| methionyl-tRNA formyltransferase [Haemophilus paraphrohaemolyticus
HK411]
Length = 317
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 136/313 (43%), Gaps = 77/313 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK+ A H+I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGKKLQASPVKQLAEAHNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SL+ E L + D+M+V+ ILPE
Sbjct: 64 QPKSLR--------KEEVQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSILP 115
Query: 99 --------------------------DTSLTLQNKLEKL-SKILIIDTIKKIEYDMTKLF 131
D L + L K+ + IL I+T + + +L
Sbjct: 116 RWRGAAPIQRAIWAGDSQTGVTIMQMDIGLDTGDMLHKVYTDILPIETSASLYQKLAELA 175
Query: 132 ---------------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
FKP Q + +YA + K EA LDW+L A + R I AFNP P
Sbjct: 176 PPALLEVLNGLENQQFKPEKQDDDLANYAEKLTKEEAKLDWNLPACQLERNIRAFNPAPI 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A ++ ++ +K+++A+ L K GT++ + G+ + V+ + +LQ
Sbjct: 236 A-FLTVNVNGNEERIKVYQANVLP-HQEKAFGTVIAFD-KKGLKIATQDGVLNITQLQPQ 292
Query: 235 NKKKISATEFING 247
KK +S +F+NG
Sbjct: 293 GKKPMSVQDFLNG 305
>gi|397668267|ref|YP_006509804.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Legionella pneumophila subsp.
pneumophila]
gi|395131678|emb|CCD09971.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Legionella pneumophila subsp.
pneumophila]
Length = 314
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 134/312 (42%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ ++FAGT LD L S H++ + T+PD +GRG KL SPVK++A+ H I +
Sbjct: 4 LTVVFAGTPEFGLPCLDALIQSRHHLKAVYTQPDRPAGRGRKLQESPVKEWAINHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP++ K G + L+ ++ D+M+V+ ILP+
Sbjct: 64 QPLNFKNQGAIDE--------LSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L L K + + DT + + K+
Sbjct: 116 RWRGASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKATCPVTSSDTAGSLHDKLAKMS 175
Query: 132 FKPQSNIGES-----------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
KP ++ E+ YA I K EA ++W SA I RKI AFNP+P
Sbjct: 176 VKPLLDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPV 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T + L+I +A A I ST+ PG +LNV+ NG+LV N + + ++Q
Sbjct: 236 AYTLA-----GELMLRIHQAKATDIMSTEMPGMVLNVD-KNGMLVATNDNALLVEKIQFP 289
Query: 235 NKKKISATEFIN 246
K IS +++N
Sbjct: 290 GAKVISVRDWLN 301
>gi|433544431|ref|ZP_20500815.1| methionyl-tRNA formyltransferase [Brevibacillus agri BAB-2500]
gi|432184286|gb|ELK41803.1| methionyl-tRNA formyltransferase [Brevibacillus agri BAB-2500]
Length = 316
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 69/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT A + LD L + +N++ ++T+PD GR L PVK+ AL+H + ++Q
Sbjct: 5 RILFMGTPDFAVSSLDALTEAGYNVIGVVTQPDRPVGRKQVLTPPPVKEAALRHGLAVLQ 64
Query: 62 PISLK----------------LNGKYHKIANETHKLLNKIEFDIMIV-MGILPE------ 98
P +K + Y +I + +LL+ F + V +LP+
Sbjct: 65 PEKIKAEEALEEVLALSPDLIVTAAYGQILPK--RLLDAPPFGCINVHASLLPKYRGGAP 122
Query: 99 ----------DTSLTLQNKLEK------LSKILII----DTI----KKIEYDMTKLFFK- 133
++ +T+ +E LSK+++ DT+ K+ ++L +
Sbjct: 123 IHKAIVDGEAESGVTIMYMVEALDAGDMLSKVVVPIEERDTVGLLHDKLAVAGSRLLLET 182
Query: 134 -PQSNIGE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
P+ GE ++AP IK+ + +DW+ SA I ++ NP+P A T Y
Sbjct: 183 VPRLLAGEIQPEAQDHSAATFAPNIKRADEKIDWTKSAAQIYNQVRGLNPWPVAFTTY-- 240
Query: 182 YQNKKKFLKIWKAHALSIESTKK-PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ K K+W +KK PGTI+ +G++V CG +K+ ELQ KK++S
Sbjct: 241 ---EGKVWKLWWVEKWPEAGSKKAPGTII-AREEDGLVVACGSGAVKITELQPEGKKRMS 296
Query: 241 ATEFINGCIKNIK 253
A +F+ G +I+
Sbjct: 297 ALDFLRGAGSSIE 309
>gi|114330412|ref|YP_746634.1| methionyl-tRNA formyltransferase [Nitrosomonas eutropha C91]
gi|122314566|sp|Q0AJ02.1|FMT_NITEC RecName: Full=Methionyl-tRNA formyltransferase
gi|114307426|gb|ABI58669.1| methionyl-tRNA formyltransferase [Nitrosomonas eutropha C91]
Length = 316
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 8/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ TL +KL L I++T+ ++ D KL Q N YA I+K+EA +D
Sbjct: 155 IEPHDTAATLHDKLADLGGKCIVETLTLLDQD--KLTPTLQDNASACYAAKIRKSEAEID 212
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ + I R I FNP+PGA T +K+W+A+ ++ T++ G I+ + H
Sbjct: 213 WTRDSTHIDRMIRTFNPYPGAFTSL-----HGSMIKLWQANIINRSDTRQAGEIIAAD-H 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
NGI+V CG++ + + LQK KK++A +F+ G
Sbjct: 267 NGIIVACGRDALSINILQKAGGKKLTAAQFLAG 299
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT + AA L+ + S +I+L+LT+PD +GRGMKL SPVK A +++I ++
Sbjct: 1 MKIIFAGTPVFAAKALEAVQKSGFDILLVLTQPDRPAGRGMKLQASPVKILAQQYNIPLL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP +LK + + L ++ D+MIV ILPE
Sbjct: 61 QPETLK--------SPDIQTQLETLKPDVMIVAAYGLILPE 93
>gi|399048082|ref|ZP_10739812.1| methionyl-tRNA formyltransferase [Brevibacillus sp. CF112]
gi|398053996|gb|EJL46142.1| methionyl-tRNA formyltransferase [Brevibacillus sp. CF112]
Length = 316
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 69/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT A + LD L + +N++ ++T+PD GR L PVK+ AL+H + ++Q
Sbjct: 5 RILFMGTPDFAVSSLDALIEAGYNVIGVVTQPDRPVGRKQVLTPPPVKEAALRHGLAVLQ 64
Query: 62 PISLK----------------LNGKYHKIANETHKLLNKIEFDIMIV-MGILPE------ 98
P +K + Y +I + +LL+ F + V +LP+
Sbjct: 65 PEKIKAEEALEEVLALSPDLIVTAAYGQILPK--RLLDAPPFGCINVHASLLPKYRGGAP 122
Query: 99 ----------DTSLTLQNKLEK------LSKILII----DTI----KKIEYDMTKLFFK- 133
++ +T+ +E LSK+++ DT+ K+ ++L +
Sbjct: 123 IHKAIVDGEAESGVTIMYMVEALDAGDMLSKVVVPIEERDTVGLLHDKLAVAGSRLLLET 182
Query: 134 -PQSNIGE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
P+ GE ++AP IK+ + +DW+ SA I ++ NP+P A T Y
Sbjct: 183 VPRLLAGEIQPEAQDHSAATFAPNIKRADEKIDWTKSAAQIYNQVRGLNPWPVAFTTY-- 240
Query: 182 YQNKKKFLKIWKAHALSIESTKK-PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ K K+W +KK PGTI+ +G++V CG +K+ ELQ KK++S
Sbjct: 241 ---EGKVWKLWWVEKWPEAGSKKAPGTII-AREEDGLVVACGSGAVKITELQPEGKKRMS 296
Query: 241 ATEFINGCIKNIK 253
A +F+ G +I+
Sbjct: 297 ALDFLRGAGSSIE 309
>gi|336322484|ref|YP_004602451.1| methionyl-tRNA formyltransferase [Flexistipes sinusarabici DSM
4947]
gi|336106065|gb|AEI13883.1| Methionyl-tRNA formyltransferase [Flexistipes sinusarabici DSM
4947]
Length = 325
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 143/309 (46%), Gaps = 72/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYA------- 52
MK+I+ GT A L++L N NI L++ +PD GRG KL PVK++A
Sbjct: 16 MKVIYMGTPGIAIKPLESLVNHPRINIPLVICQPDKPKGRGKKLAPPPVKEFAETAGIEV 75
Query: 53 -----LKHSIKIIQPIS--------------------------------LKLNGKYHKIA 75
LK++ +++Q IS L KY A
Sbjct: 76 YQPLTLKNNNELVQKISHIEPDFLVVVAYGRILPNNILNSAKYAPINVHFSLLPKYRGAA 135
Query: 76 --------NETHKLLNKI-------EFDIMIVMGI-LPEDTSLTLQNKLEKLSKILIIDT 119
E H + + E DI++ + + S+ L +L +L LI+ T
Sbjct: 136 PVNWAVVNGEKHTGVTTMLMSEGLDEGDILLQKSVEIDLKNSVELSEELSELGAELIVKT 195
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ E + +PQ++ SYAP+I K + ++DWS SA I R+I F P+P A +Y
Sbjct: 196 LLNFE----NIQPRPQNHRLSSYAPVINKKDGLVDWSESASQIERQIRGFQPWPSAFSYI 251
Query: 180 ISYQNKKKFLKIWKAHAL-SIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
K +K++KA + +IES+ K G+I+ +N V CGK+ +++LELQ KK+
Sbjct: 252 -----NGKMIKLFKAEVVENIESSHKAGSIIEIN-KESFTVKCGKDCLRVLELQMEGKKR 305
Query: 239 ISATEFING 247
+A F++G
Sbjct: 306 TTAKNFLSG 314
>gi|91781431|ref|YP_556637.1| methionyl-tRNA formyltransferase [Burkholderia xenovorans LB400]
gi|123169141|sp|Q147A4.1|FMT_BURXL RecName: Full=Methionyl-tRNA formyltransferase
gi|91685385|gb|ABE28585.1| methionyl-tRNA formyltransferase [Burkholderia xenovorans LB400]
Length = 328
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL ++L + LI++ + ++E +L PQ G +YA I K+EA LDW
Sbjct: 170 DDTTATLHDRLAQDGAKLIVEALVELER-TGRLAATPQPAEGVTYAEKIGKHEAALDWRR 228
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AF+PFPG + +KIW A ++ PGTI V G+
Sbjct: 229 PAAVLARQVRAFDPFPGG----VGTLEDGTSIKIWAAIPADTKAGGAPGTIAEVT-PEGV 283
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CG+ ++L +LQK K++ EF+ G
Sbjct: 284 VVACGEGALRLTQLQKPGGKRLPVREFLAG 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL SPVK+YA +H + +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHGAGFPVPLVLTQPDRPAGRGMKLQASPVKRYAQEHGLAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY + A L D+M+V ILP++
Sbjct: 65 QPPSLRRAGKYPEQAAAAIGQLRATPHDVMVVAAYGLILPQE 106
>gi|299531892|ref|ZP_07045292.1| methionyl-tRNA formyltransferase [Comamonas testosteroni S44]
gi|298720067|gb|EFI61024.1| methionyl-tRNA formyltransferase [Comamonas testosteroni S44]
Length = 321
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ +LQ+KL L LI++ ++ L PQ G SYA I+K E+++DW+ S
Sbjct: 167 DTTASLQDKLAALGGRLIVEALEMAACG--GLSRTPQPADGVSYAHKIEKAESLIDWNES 224
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ I R++ AFNPFPG T + +K+W+A A + + PG++L+ + G+
Sbjct: 225 AEVIARRLRAFNPFPGGATSL-----GGEAIKVWEAEAQ--QGSGAPGSVLSADVR-GVR 276
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG V+ + LQ+ K+++A +F+ G
Sbjct: 277 VACGSGVLNMTLLQRAGGKRLAAGDFLRG 305
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT A L++L + + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MKVIFAGTPEFARVALESLLAAGFEVPLVLTQPDRPAGRGMKLQASPVKQCALEHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L+GKY + A ++ + D+M+V ILP+
Sbjct: 61 QPLSLRLDGKYPEDAAAAKAAIDAAQADVMVVAAYGLILPQ 101
>gi|160872198|ref|ZP_02062330.1| methionyl-tRNA formyltransferase [Rickettsiella grylli]
gi|159120997|gb|EDP46335.1| methionyl-tRNA formyltransferase [Rickettsiella grylli]
Length = 314
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 136/305 (44%), Gaps = 65/305 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT A L L S + + + T+PD +GRG KL SPVKK AL++ + +I
Sbjct: 1 MKLIFAGTPEFALPSLHAL-ASAYKLCAVYTQPDRPAGRGRKLLMSPVKKMALENKLPVI 59
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGILP----------------------- 97
QP SL+ + + K+A+ L+ + + +++ +L
Sbjct: 60 QPFSLRESKEQKKLASLHADLMVVVAYGLILPPAVLAMPRFGCINVHASLLPRWRGAAPI 119
Query: 98 --------EDTSLTLQNKLEKLSKILII----------DTIKKIEYDMTKLFF------- 132
+T +T+ E L II DT K ++ + +L
Sbjct: 120 QRAILAGDRETGITIMQMDEGLDTGEIIKKFPCSIEPTDTNKTLQDRLAELGAHALLESL 179
Query: 133 ----------KPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+PQ+ +YA I K+EA +DW A + R + AF P P A+
Sbjct: 180 KWIESGSYRSEPQNEKESTYAKKINKSEAEIDWEQPAIYLDRLVRAFYPKPVARVVL--- 236
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
K L+I KA L +++KPG IL V+ GI V GK V++LLE+Q + + +
Sbjct: 237 --GKSILRICKAEVLEETTSEKPGLILKVD-REGIDVATGKGVLRLLEVQWPGGRCLPIS 293
Query: 243 EFING 247
FI+G
Sbjct: 294 SFIHG 298
>gi|289578509|ref|YP_003477136.1| methionyl-tRNA formyltransferase [Thermoanaerobacter italicus Ab9]
gi|289528222|gb|ADD02574.1| methionyl-tRNA formyltransferase [Thermoanaerobacter italicus Ab9]
Length = 309
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 137/313 (43%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L L+ +N+ ++T+PD GRGMKL+FSPVK+ AL+ ++I+
Sbjct: 1 MKIVFMGTPEFAVPSLQKLFEEGYNVASVVTQPDKQKGRGMKLSFSPVKEVALQKGVEIL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP +K N + H+ L +I D ++V+ ILPE
Sbjct: 61 QPEKIKNNLDF------LHR-LKEINPDAIVVVAYGKILPEEILTLPKYGCINVHASLLP 113
Query: 99 -----------------DTSLT--LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIG 139
+T +T L +K +LI +I +E D + S +G
Sbjct: 114 KYRGAAPINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLSRLG 173
Query: 140 E-------------SYAPLIKKNEAV------------LDWSLSAKTIMRKINAFNPFPG 174
+ P+ +K E ++W+ +A+ I I P+PG
Sbjct: 174 AEVLIETLKRLEKGTLTPVKQKEEEASYAPILIKEMGHINWNKTAEEIRNLIRGMKPWPG 233
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
T+Y K K LKIWK + ++ GT+L ++V C KN +K++E+Q+
Sbjct: 234 CYTFY-----KDKMLKIWKGEIVEYNGKEENGTVLKSK--GDLIVKCDKNALKIVEIQQE 286
Query: 235 NKKKISATEFING 247
KK+S E++ G
Sbjct: 287 GSKKMSIREYLIG 299
>gi|385207344|ref|ZP_10034212.1| methionyl-tRNA formyltransferase [Burkholderia sp. Ch1-1]
gi|385179682|gb|EIF28958.1| methionyl-tRNA formyltransferase [Burkholderia sp. Ch1-1]
Length = 328
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL ++L + LI++ + ++E +L PQ G +YA I K+EA LDW
Sbjct: 170 DDTTATLHDRLAQDGAKLIVEALIELER-TGRLAATPQPADGVTYAEKIGKHEAALDWRR 228
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AF+PFPG + +KIW A ++ PGTI V G+
Sbjct: 229 PAAVLARQVRAFDPFPGG----VGTLEDGTSIKIWGAIPADTKAGGAPGTIAEVT-PEGV 283
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CG+ ++L +LQK K++ EF+ G
Sbjct: 284 VVACGEGALRLTQLQKPGGKRLPVREFLAG 313
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AAA L ++ + + L+LT+PD +GRGMKL SPVK+YA +H + +
Sbjct: 5 LRVIFAGTPEFAAAALAAIHGAGFPVPLVLTQPDRPAGRGMKLQTSPVKRYAQEHGLAVA 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ GKY + A L D+M+V ILP++
Sbjct: 65 QPPSLRRAGKYPEEAAAAIGQLRATPHDVMVVAAYGLILPQE 106
>gi|188580853|ref|YP_001924298.1| methionyl-tRNA formyltransferase [Methylobacterium populi BJ001]
gi|179344351|gb|ACB79763.1| methionyl-tRNA formyltransferase [Methylobacterium populi BJ001]
Length = 309
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 125/307 (40%), Gaps = 66/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A LD L+ H+IV + T+ +GRGM L SPV A + ++
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHDIVAVYTRAPAKAGRGMALKPSPVHARAEALGLPVL 60
Query: 61 QPISLKLNGKYHKIANET--------------HKLLNKIEFDIMIVMG-ILPE------- 98
P +LK + A K+L+ F + + G +LP
Sbjct: 61 TPSTLKSEEAFETFAGHGADVAVVVAYGMLLPQKILDVPRFGCLNLHGSLLPRWRGAAPI 120
Query: 99 ----------------------DTS-LTLQNKL---EKLSKILIIDTIKKIEYDM----- 127
DT + ++ +L E ++ + D + + D+
Sbjct: 121 QRAVMAGDAESGVGVMRMEAGLDTGPVAMEARLTITEGMTAGELHDRLMPLGADLMGRAI 180
Query: 128 -----TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
L F PQ+ G YA I EA +DWS A+ + R IN +PFPGA Y
Sbjct: 181 QALEREGLTFTPQATEGVVYAHKITNEEARIDWSRQAEEVARHINGLSPFPGA---YFEA 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI-SA 241
K ++ AL+ + + PGT+L+ V CG ++LLEL++ K + S
Sbjct: 238 DLGKGPERVKVLRALAHDGSGTPGTLLDAAG----TVACGTGAVRLLELRRAGKGGVASG 293
Query: 242 TEFINGC 248
EF+ G
Sbjct: 294 EEFLRGA 300
>gi|410634871|ref|ZP_11345498.1| methionyl-tRNA formyltransferase [Glaciecola lipolytica E3]
gi|410145615|dbj|GAC12703.1| methionyl-tRNA formyltransferase [Glaciecola lipolytica E3]
Length = 319
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 147/314 (46%), Gaps = 78/314 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ I+FAGT AA L L +S+HNI+ + ++PD +GRG KL S VK+ A++H++ ++
Sbjct: 5 LNIVFAGTPDFAAQHLQALIDSDHNIIAVYSQPDRPAGRGKKLQASAVKQLAIEHNLHVL 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE---DT----SLTLQNKL-- 108
QP SLK + E + L ++ DIMIV+ ILP+ DT L + L
Sbjct: 65 QPESLK--------SQEAQQTLADLKPDIMIVVAYGLILPQVVLDTPRLGCLNVHGSLLP 116
Query: 109 ---------------EKLSKILIIDTIKKIE--------------YDMTKLFFKPQSNIG 139
+ + + I+ K ++ D + ++ + IG
Sbjct: 117 RWRGAAPIQRAIWAGDSHTGVTIMQMDKGLDTGAMLHKQFIPIEATDTSATLYEKLAKIG 176
Query: 140 -----------ESYAPLIKKNE------------AVLDWSLSAKTIMRKINAFNPFPGAK 176
E P ++ NE A +DW++SA+ + R AFNP+P
Sbjct: 177 PTALLECLDKIEQVEPEVQNNELANYAQKLSKQEACIDWNVSAQQLERNTRAFNPWP--V 234
Query: 177 TYY-ISYQNKKK--FLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
TY+ I+ ++ ++ +K+W+A + +K PGTI++ NGI + ++ + L +LQ
Sbjct: 235 TYFEITPESSEQSIAIKLWEAKVVKANESKAPGTIVSAT-KNGIEITTSEDNLLLTKLQI 293
Query: 234 NNKKKISATEFING 247
KK ++ + +N
Sbjct: 294 PGKKPMTVADILNA 307
>gi|238783196|ref|ZP_04627222.1| Methionyl-tRNA formyltransferase [Yersinia bercovieri ATCC 43970]
gi|238715992|gb|EEQ07978.1| Methionyl-tRNA formyltransferase [Yersinia bercovieri ATCC 43970]
Length = 315
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 97/170 (57%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE DI PEDTS TL +KL +L ++ T++++ + + ++
Sbjct: 147 DTGDMLHKIECDIQ------PEDTSATLYDKLAQLGPQGLLITLQQLAEGRAQPEVQDEA 200
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P +Y++ ++ +K+W+A
Sbjct: 201 QV--TYAEKLSKEEAKLDWSLSAAQLERCIRAFNPWP--VSYFVV---DEQPVKVWQAEV 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L KPGTI++ + H GI V + V+ + +LQ KK +SA + +N
Sbjct: 254 LPAVDNTKPGTIIHADKH-GIQVATAQGVLNITQLQPAGKKAMSAADLLN 302
>gi|296284448|ref|ZP_06862446.1| methionyl-tRNA formyltransferase [Citromicrobium bathyomarinum
JL354]
Length = 306
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 62/302 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A L+ L ++ H +V + T+P +GRG KL +PV + A + I++
Sbjct: 1 MRIVFMGTPDFAVPTLEALVHAAHEVVCVYTQPPRKAGRGKKLQPTPVHQAAERLGIEVR 60
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNKIEFDIMI 91
P SLK L+ H N +L + I
Sbjct: 61 HPASLKSQEEKDAFAALDADVGVVAAYGLILPQAVLDAPTHGCLNVHASILPRWRGAAPI 120
Query: 92 VMGILPEDTS-----LTLQNKLEKLSKILIIDTI--KKIEYDMTKLFFK----------- 133
IL DT + ++ L+ + I T +K D+T +
Sbjct: 121 QRAILAGDTGTGVTIMQMEAGLDTGPMLATIRTPIDRKTAGDLTDELAEKGAQLMIGTLR 180
Query: 134 ------P--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
P Q + ++AP I K EA LDW+ A + R++ AF P+PGA + Y+
Sbjct: 181 ELSKHIPVMQDDAEATHAPKIDKAEARLDWTQDAVQVERQVRAFAPWPGA---FFEYEGA 237
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+ ++ A E + PGT+L+ + + V CG ++L +Q+ K + +F
Sbjct: 238 EGMERVKTLAAEIAEGSGAPGTVLD----DALTVACGSGALRLTRVQRAGKPAMDTADFQ 293
Query: 246 NG 247
G
Sbjct: 294 RG 295
>gi|358635112|dbj|BAL22409.1| methionyl-tRNA formyltransferase [Azoarcus sp. KH32C]
Length = 315
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 93/162 (57%), Gaps = 15/162 (9%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKI-EYDMTKLFFKPQSNIGESYAPL 145
M++ G +P +DT+ TL ++L L +I++ ++++ + ++T + PQ + G +YA
Sbjct: 152 MLMKGAVPIADDDTTATLHDRLATLGAGMIVEALRRLPKGELTPI---PQPDNGVTYAAK 208
Query: 146 IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKP 205
I K EA L W A + R + AFNPFPGA ++ +K+W A +S +P
Sbjct: 209 IGKAEAALAWQRPAIELARAVRAFNPFPGAVGML-----REVPVKMWSAEPVS--GRGEP 261
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GT+L + +G++V CG+ +++ ELQK +++ A EF+ G
Sbjct: 262 GTVLAAD-DSGVVVACGEQALRVTELQKPGSRRMPAGEFLRG 302
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++ FAGT AAA LD + ++ ++ L+LT+PD +GRGMKL SPVK+ AL H I +
Sbjct: 6 LRVAFAGTPEFAAAALDAILDAGFSVPLVLTQPDRPAGRGMKLTASPVKQVALTHGIPVD 65
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP L+ +E L D+++V
Sbjct: 66 QPEKLR--------TDEQRAALVTCAPDVLVV 89
>gi|119896392|ref|YP_931605.1| methionyl-tRNA formyltransferase [Azoarcus sp. BH72]
gi|119668805|emb|CAL92718.1| Fmt protein [Azoarcus sp. BH72]
Length = 321
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ TL +KL L I++ + + L PQ G +YA I ++EA +D
Sbjct: 159 IRPDDTTGTLHDKLAALGAECIVEALAALPGGT--LSRTPQPAAGVTYANKIHRDEAAID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-KPGTILNVNF 213
W+ A I R + AFNPFP A + +K+W A +++ + PGT+L +
Sbjct: 217 WTRPAADIERAVRAFNPFPVAVGSL-----RDTVIKVWAAEVVAVPAPDAAPGTVLAAD- 270
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G++V CG ++L ELQ+ ++ +A EF+ G
Sbjct: 271 AEGVVVACGAQALRLRELQRPGSRRFAAGEFLRG 304
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++ FAGT AA+ L + ++ +++ L+LT+PD +GRGMKL SPVK+ AL + +
Sbjct: 5 LRVAFAGTPEFAASALAAILDAGYSVPLVLTQPDRPAGRGMKLTPSPVKQLALARGLDVD 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP L+ +E + L E D+++V ILP
Sbjct: 65 QPEKLRT--------DEQRQRLAACEPDVLVVAAYGLILP 96
>gi|254672815|emb|CBA06956.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha275]
Length = 308
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAG AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGAPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANET-----------------------HKLLNK------------- 84
QP L+ N + ++ E H LN
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAP 120
Query: 85 ----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDT 119
++ DI + G I P DT+ + + L ++ ++
Sbjct: 121 IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVAD 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++++ +L Q G +YA + K EA +DWS SA I RKI AFNP P A +
Sbjct: 181 LQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAA---W 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ YQ K +KI +A ++ + G +L+ + +G++V CG+N +K+ ELQ +++
Sbjct: 237 VEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA-DGLVVACGENALKITELQPAGGRRM 291
Query: 240 SATEFING 247
+ F G
Sbjct: 292 NIAAFAAG 299
>gi|37681410|ref|NP_936019.1| methionyl-tRNA formyltransferase [Vibrio vulnificus YJ016]
gi|320154883|ref|YP_004187262.1| methionyl-tRNA formyltransferase [Vibrio vulnificus MO6-24/O]
gi|39931193|sp|Q7MGK5.1|FMT_VIBVY RecName: Full=Methionyl-tRNA formyltransferase
gi|37200162|dbj|BAC95990.1| methionyl-tRNA formyltransferase [Vibrio vulnificus YJ016]
gi|319930195|gb|ADV85059.1| methionyl-tRNA formyltransferase [Vibrio vulnificus MO6-24/O]
Length = 315
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAAQHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + +A+ +T KL
Sbjct: 65 QPENFKSDEAKQALADLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS T+ +KL KL + +++ +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIDASDTSATMYDKLAKLGPVALVECL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I T + K Q + +YA + K EA ++W A+ I R + AFNP+P +
Sbjct: 185 ADIAAG-TAIAIK-QDDERANYAKKLSKEEARINWQDDAEHIERCVRAFNPWPMSH---- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ + +K+W++ + GTIL + +GI + G + L ++Q KK +
Sbjct: 239 -FEVAENSIKVWQSRVEASSHDAPAGTILKAD-KSGIYIATGHGCLVLEQIQIPGKKAMP 296
Query: 241 ATEFING 247
+ +N
Sbjct: 297 VQDVLNA 303
>gi|160896280|ref|YP_001561862.1| methionyl-tRNA formyltransferase [Delftia acidovorans SPH-1]
gi|229487492|sp|A9BS67.1|FMT_DELAS RecName: Full=Methionyl-tRNA formyltransferase
gi|160361864|gb|ABX33477.1| methionyl-tRNA formyltransferase [Delftia acidovorans SPH-1]
Length = 327
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DT+ +L +KL L LI++ ++ L PQ G +YA I+K E+ +D
Sbjct: 163 ITADDTTASLHDKLADLGGRLIVEALEMSA--CGGLPRTPQPAEGVNYAHKIEKAESQID 220
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH---ALSIESTKKPGTILNV 211
W A+ I R++ AFNPFPG T Y + +K+W+AH A+++ T PGT+L+
Sbjct: 221 WRQDAEAIARRLRAFNPFPGGATQY-----GDESIKVWEAHADPAIAV-GTAAPGTVLSA 274
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G+ V CG V+ + LQ+ K+++A +F+ G
Sbjct: 275 G-ADGVRVACGNGVLCMTLLQRAGGKRLAAGDFLRG 309
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MRVIFAGTPEFARVALERLLAAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALEHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY + A + + D+M+V ILP+
Sbjct: 61 QPRSLRLDGKYPEEAAAARAAIEAAQADVMVVAAYGLILPQ 101
>gi|52842800|ref|YP_096599.1| methionyl tRNA formyltransferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778489|ref|YP_005186928.1| methionyl tRNA formyltransferase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|73919401|sp|Q5ZSC5.1|FMT_LEGPH RecName: Full=Methionyl-tRNA formyltransferase
gi|52629911|gb|AAU28652.1| methionyl tRNA formyltransferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364509305|gb|AEW52829.1| methionyl tRNA formyltransferase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 314
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ ++FAGT LD L S H++ + T+PD +GRG KL SPVK++A+ H I +
Sbjct: 4 LTVVFAGTPEFGLPCLDALIQSRHHLKAVYTQPDRPAGRGRKLQESPVKEWAINHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP LN K + +E L+ ++ D+M+V+ ILP+
Sbjct: 64 QP----LNFKNQEAVDE----LSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L L K + + DT + + K+
Sbjct: 116 RWRGASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKAACPVTSSDTAGSLHDKLAKMS 175
Query: 132 FKPQSNIGES-----------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
KP ++ E+ YA I K EA ++W SA I RKI AFNP+P
Sbjct: 176 VKPLLDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPV 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T + L+I +A A I ST+ PG ILN++ NG+LV N + + ++Q
Sbjct: 236 AYTLA-----GELMLRIHQAKATDIMSTEMPGMILNID-KNGMLVATSDNALLVEKIQFP 289
Query: 235 NKKKISATEFIN 246
K IS +++N
Sbjct: 290 GAKIISVRDWLN 301
>gi|296133299|ref|YP_003640546.1| methionyl-tRNA formyltransferase [Thermincola potens JR]
gi|296031877|gb|ADG82645.1| methionyl-tRNA formyltransferase [Thermincola potens JR]
Length = 321
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 128/309 (41%), Gaps = 67/309 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIF GT A L L + H++V ++T+PD GRG KL PVK A + +++
Sbjct: 1 MKIIFMGTPDFAVPCLKELVKTGHDVVQVITQPDRPKGRGRKLMPPPVKVTAQELGLQVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEF------DIMIV---------MGILP-------- 97
QP +K KI + + F DI+ + ILP
Sbjct: 61 QPDKIKAPEAVEKIRELAPDAIVVVAFGQLLSRDILAIPRFGCINVHASILPKYRGAAPI 120
Query: 98 --------EDTSLTLQNKLEKL--SKILIIDTIKKIEYDMT-----KLFFK--------- 133
+++ +++ E L +++++ E D T KL F
Sbjct: 121 HWAVINGEKESGVSIMYMDEGLDTGDVVLVEKTPIAESDTTGILHDKLAFLGARALLRAL 180
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
PQ + SYAPL+ K ++DW +++ I + NP+P A TY+
Sbjct: 181 DLIARGEARRIPQDDSAASYAPLLDKGVELIDWHKTSRQIKDLVRGLNPWPVAYTYF--- 237
Query: 183 QNKKKFLKIWKAHALSIESTK----KPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+K LKIW E+ +PG I+ V GI V G + + ELQ KK
Sbjct: 238 --GEKILKIWTVDVAGEETAADGPFRPGRIIKVVPEEGIYVASGDGAVIIKELQLQGSKK 295
Query: 239 ISATEFING 247
+SA +FI G
Sbjct: 296 MSAEDFIRG 304
>gi|397665184|ref|YP_006506722.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Legionella pneumophila subsp.
pneumophila]
gi|395128595|emb|CCD06813.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Legionella pneumophila subsp.
pneumophila]
Length = 314
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 135/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ ++FAGT LD L S H++ + T+PD +GRG KL SPVK++A+ H I +
Sbjct: 4 LTVVFAGTPEFGLPCLDALIQSRHHLKAVYTQPDRPAGRGRKLQESPVKEWAINHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP LN K + +E L+ ++ D+M+V+ ILP+
Sbjct: 64 QP----LNFKNQEAVDE----LSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L L K + + DT + + K+
Sbjct: 116 RWRGASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKAACPVTSSDTAGSLHDKLAKMS 175
Query: 132 FKPQSNIGES-----------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
KP ++ E+ YA I K EA ++W SA I RKI AFNP+P
Sbjct: 176 VKPLLDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPV 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T + L+I +A A I ST+ PG +LN++ NG+LV N + + ++Q
Sbjct: 236 AYTLA-----GELMLRIHQAKATDIMSTEMPGMVLNID-KNGMLVATSDNALLVEKIQFP 289
Query: 235 NKKKISATEFIN 246
K IS +++N
Sbjct: 290 GAKVISVRDWLN 301
>gi|410629536|ref|ZP_11340236.1| methionyl-tRNA formyltransferase [Glaciecola arctica BSs20135]
gi|410151021|dbj|GAC17103.1| methionyl-tRNA formyltransferase [Glaciecola arctica BSs20135]
Length = 314
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT AA L L +SEH ++ + ++PD +GRG KL S VK A++H I +
Sbjct: 5 LKIVFAGTPEFAALHLQALIDSEHQVIAVYSQPDRPAGRGKKLQASAVKLLAVEHDIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP SLK E+ L K++ DIM+V+ ILP
Sbjct: 65 QPQSLK--------TAESQLALAKLDADIMVVVAYGLILPTAILNTPKLGCLNVHGSLLP 116
Query: 98 ----------------EDTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
++T +T+ E L +L+ ++ + D + ++ + IG
Sbjct: 117 KWRGAAPIQRSLWAGDKETGVTIMQMDEGLDTGAMLLKQSLVITQEDTSATLYQKLAEIG 176
Query: 140 -----------------------ESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAK 176
SYA + K EA +DW+L+A+ + R I AFNP+P A
Sbjct: 177 PKALLETLATLVEIQPQIQDDKLASYAKKLSKEEAKIDWNLTAEQLERNIRAFNPWPVA- 235
Query: 177 TYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
+ ++ N +K++ + + E+ P ++ + GILV G N + + +LQ K
Sbjct: 236 FFPLNDSN----IKVYSSVVVKSENPNIPAGVIVKSDKQGILVATGNNCLLITKLQLPGK 291
Query: 237 KKISATEFING 247
K + A + +NG
Sbjct: 292 KPMLAADVLNG 302
>gi|346306737|ref|ZP_08848891.1| methionyl-tRNA formyltransferase [Dorea formicigenerans 4_6_53AFAA]
gi|345908095|gb|EGX77763.1| methionyl-tRNA formyltransferase [Dorea formicigenerans 4_6_53AFAA]
Length = 331
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI--- 57
MK+IF GT + L+ L + H +VL +T+PD GRG K+ ++PVK+ AL I
Sbjct: 1 MKVIFMGTPDFSVGTLEALAEAGHEVVLAVTQPDKPKGRGGKMQYTPVKEAALARDIPVY 60
Query: 58 ---KIIQPISLKLNGKY------------------------------------------- 71
KI +P ++ KY
Sbjct: 61 QPKKIREPECIEELKKYNADIMVVIAFGQILPKEILQMTPYGCINVHASLLPKYRGAAPI 120
Query: 72 -------HKIANETHKLLNK-IEFDIMIVMGILPED---TSLTLQNKLEKLSKILIIDTI 120
K++ T +N+ ++ MI+ +P D T +L +KL + L ++T+
Sbjct: 121 QWAVIDGEKVSGVTTMQMNEGLDTGDMILKTEIPLDQKETGGSLHDKLAEAGAKLCVETL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
K +E D T + +PQ +YA ++ KN ++W+ A I R I NP+P A T++
Sbjct: 181 KCLE-DKTATW-EPQGESTTAYAKMLDKNLGNINWNDPAVQIERLIRGLNPWPSAYTHW- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K +K+W+A + + ++ GTI+ V + V G+ ++K+ ELQ KK++
Sbjct: 238 ----NDKVIKLWQADVVEDNTDQEAGTIVKVE-KDSFYVQTGEGLLKIEELQLQGKKRMD 292
Query: 241 ATEFING 247
A F+ G
Sbjct: 293 AGAFLRG 299
>gi|261213230|ref|ZP_05927512.1| methionyl-tRNA formyltransferase [Vibrio sp. RC341]
gi|260837504|gb|EEX64207.1| methionyl-tRNA formyltransferase [Vibrio sp. RC341]
Length = 315
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K + E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SEESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEANDTSASMYDKLAELG 176
Query: 134 PQ------SNIGESYAPLIKKN-------------EAVLDWSLSAKTIMRKINAFNPFPG 174
PQ S+I + A +K++ EA +DWS A I R I AFNP+P
Sbjct: 177 PQALIECLSDIAQGTAVAVKQDDTQANYAHKLNKEEARIDWSNDAIHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTIL + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVTQAPGTILQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|335041810|ref|ZP_08534837.1| methionyl-tRNA formyltransferase [Methylophaga aminisulfidivorans
MP]
gi|333788424|gb|EGL54306.1| methionyl-tRNA formyltransferase [Methylophaga aminisulfidivorans
MP]
Length = 309
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 8/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDT+ L ++L L +++T+K IE + KPQ++ SYA + K EA +D
Sbjct: 155 ITEEDTAQVLHDRLAILGATTLVETLKDIE--QRQRNAKPQNDDLTSYASKLDKKEADID 212
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W LSA+ I+RKINAFNP+P A+T + +IW+A + E+ + G I+ V+
Sbjct: 213 WQLSAQDILRKINAFNPWPVAQTIW-----HDAIFRIWRAQLVKEETRQPAGQIIKVD-K 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI V G VI++ ELQ K+ +S +F+N
Sbjct: 267 VGIDVATGDGVIRITELQLPGKRAMSVQDFLNA 299
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AA L L N+EH I + T+PD +GRG KL SPVK+ AL+H+I +
Sbjct: 1 MRIIFAGTPAFAAETLKALINTEHEICAVYTQPDRPAGRGRKLTASPVKQLALEHNIPVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP++ K + +A + D+MIV+ +LP+
Sbjct: 61 QPLNFKTDDAIQTLAG--------YQADLMIVVAYGLLLPQ 93
>gi|238797212|ref|ZP_04640713.1| Methionyl-tRNA formyltransferase [Yersinia mollaretii ATCC 43969]
gi|238718849|gb|EEQ10664.1| Methionyl-tRNA formyltransferase [Yersinia mollaretii ATCC 43969]
Length = 320
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE DI PEDTS TL +KL +L ++ T++++ + + ++
Sbjct: 152 DTGDMLHKIECDIQ------PEDTSATLYDKLAQLGPQGLLITLQELAEGRAQPEVQDEA 205
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P +Y++ ++ +K+W+A
Sbjct: 206 QV--TYAEKLSKEEAKLDWSLSAAQLERCIRAFNPWP--VSYFVV---DEQSVKVWQAQV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L +PGTI++ + H GI V + V+ + +LQ KK +SA + +N
Sbjct: 259 LPAVGNTQPGTIIHADKH-GIQVATAEGVLNITQLQPAGKKAMSAADLLN 307
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A + I +
Sbjct: 10 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKILAEQQGIPVF 69
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + DIM+V+ ILP
Sbjct: 70 QPKSLRPEENQHLVAD--------LNADIMVVVAYGLILP 101
>gi|254560756|ref|YP_003067851.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Methylobacterium extorquens DM4]
gi|254268034|emb|CAX23905.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Methylobacterium extorquens DM4]
Length = 309
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 124/307 (40%), Gaps = 66/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A LD L+ H I + T+ +GRGM L SPV A + ++
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHTIAAVYTRAPARAGRGMALKLSPVHARAEALGLPVL 60
Query: 61 QPISLKLNGKYHKIAN-ET-------------HKLLNKIEFDIMIVMG-ILPE------- 98
P +LK A ET ++L+ F + + G +LP
Sbjct: 61 TPTTLKSEEAAETFAGHETDVAVVVAYGMLLPQRILDLPRFGCLNLHGSLLPRWRGAAPI 120
Query: 99 ----------------------DTS-LTLQNKL---EKLSKILIIDTIKKIEYDM----- 127
DT + ++ +L E ++ + D + + D+
Sbjct: 121 QRAVMAGDAESGVGVMRMEAGLDTGPVAMEARLAITEGMTAGELHDALMPLGADLMGRAI 180
Query: 128 -----TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
L F PQ+ G YA I EA +DWS A + R IN +PFPGA Y+
Sbjct: 181 RALEQDGLTFTPQAEEGVVYAHKITNEEARIDWSRPAAEVARHINGLSPFPGA---YVEA 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
K ++ A++ E + PGT+L+ V CG ++LLEL++ K ++
Sbjct: 238 DLGKGPERVKVLRAVTAEGSGAPGTLLDAAG----TVACGTGAVRLLELRRAGKGGTASG 293
Query: 243 E-FINGC 248
E F+ G
Sbjct: 294 EAFLRGA 300
>gi|255282545|ref|ZP_05347100.1| methionyl-tRNA formyltransferase [Bryantella formatexigens DSM
14469]
gi|255266838|gb|EET60043.1| methionyl-tRNA formyltransferase [Marvinbryantia formatexigens DSM
14469]
Length = 332
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 127/331 (38%), Gaps = 94/331 (28%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT A L L +S H + + T+PD GRG + +PVK+ AL I +
Sbjct: 1 MRVVFMGTPDFAVGTLRALISSRHEVAAVFTQPDKPKGRGKSVQITPVKEEALAAGIPVF 60
Query: 61 QPISLK-------------------------------------------LNGKYHKIANE 77
QP+ ++ L KY A
Sbjct: 61 QPVRVREESVLEQIRELAPEVIVVVAFGQIIPQAVLDIPRYGCVNVHASLLPKYRGAAPI 120
Query: 78 THKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTI 120
++N EF + M + P++T +L NKL L++ T+
Sbjct: 121 QWAVINGEEFSGVTTMQMDAGLDTGDMLLTEKVALAPDETGGSLFNKLSVTGAQLLLKTM 180
Query: 121 KKIEYDMTKLFFKPQSNIGES---YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
+E PQ ES YA ++KK + +DWS SA I R + NP+P A T
Sbjct: 181 DALENGS----VTPQPQPAESPTAYAAMLKKTDGEIDWSRSAAEIERLVRGLNPWPSAYT 236
Query: 178 YYISYQNKKKFLKIWKAH-------ALSIESTKK--------------PGTILNVNFHNG 216
+ K LKIW+A S E+ +K PGT++ V +
Sbjct: 237 HL-----NGKTLKIWRAELYEKDGDGASGEADEKRTAAEKAEKEMCTAPGTVVKVT-KSE 290
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ V G V+ L E+Q KK++ F+ G
Sbjct: 291 LCVQTGDGVLSLTEVQLEGKKRMDTAAFLRG 321
>gi|319789196|ref|YP_004150829.1| methionyl-tRNA formyltransferase [Thermovibrio ammonificans HB-1]
gi|317113698|gb|ADU96188.1| methionyl-tRNA formyltransferase [Thermovibrio ammonificans HB-1]
Length = 314
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 129/310 (41%), Gaps = 76/310 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYA-------- 52
+K++F GT A L L S + L++T+PD +GRG KL PVK A
Sbjct: 6 LKVVFMGTPDFAVPSLKALVESGFQVPLVITQPDKPAGRGKKLKPPPVKTVAEKLGIEVL 65
Query: 53 ----------LKHSIKIIQP--------------------------ISLKLNGKYHKIAN 76
LK ++ I+P + L +Y +
Sbjct: 66 QPERIKENAELKEKLRAIKPDLIVVAAYGKILPRWLLDLPRFGTVNVHASLLPEYRGASP 125
Query: 77 ETHKLLNKIEFDIMIVMGILPE-----------------DTSLTLQNKLEKLSKILIIDT 119
LL+ E + +M ++PE D + TL +KL +L L+++T
Sbjct: 126 IQAALLDGKEETGVTIMKVIPELDAGPIIAQEKVKIEPEDNAQTLHDKLSELGAKLLVET 185
Query: 120 IKKIEYDMTKLFFKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
+ + K KP Q + +Y I K +DW SA+ I + AF P+P A T
Sbjct: 186 LPR----YVKGELKPVEQDDSKATYCKQITKEMGKIDWKESARKIFNAVRAFTPWPSAYT 241
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
+Y K K +KI A +E + +PG ++ + ++V CGK +K+ L+ KK
Sbjct: 242 FY-----KGKRVKITSAE--PVEGSGRPGEVIKADRE--LVVACGKGALKIKRLRPEGKK 292
Query: 238 KISATEFING 247
+IS EFI G
Sbjct: 293 EISGEEFIRG 302
>gi|388255976|ref|ZP_10133157.1| Fmt methionyl-tRNA formyltransferase [Cellvibrio sp. BR]
gi|387939676|gb|EIK46226.1| Fmt methionyl-tRNA formyltransferase [Cellvibrio sp. BR]
Length = 323
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 131/307 (42%), Gaps = 64/307 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMK------------------ 42
++IIFAGT AA L L S H ++ + ++PD +GRG K
Sbjct: 5 LRIIFAGTPEFAAEHLKALLGSRHQVIAVYSQPDRPAGRGKKLSASPVKEVALAHDIPVY 64
Query: 43 --LNF-SPVKKYALKH---------SIKIIQPISLKLNGKYHKI---------------- 74
LNF SP AL + +I P ++ + I
Sbjct: 65 QPLNFKSPEAVEALAALNADLMVVVAYGLILPQAVLAAPRLGCINVHASILPRWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A +T + ++ D+ + G IL EDT +L ++L L +I+ +
Sbjct: 125 QRAIEAGDTQTGVTIMQMDVGLDTGDMLIKAYCPILAEDTGGSLHDRLITLGAPALIEAL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
IE K + Q + +YAP + K EA L+W LSA + RK+ AFNPFP A T
Sbjct: 185 DLIESGAIK--PEKQDDSLSNYAPKLSKEEAALNWQLSAVELARKVRAFNPFPVAHTKPA 242
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ ++ +++W A A + + PG+I +N G+ + C + + L LQ KK +S
Sbjct: 243 GASDDQR-MRVWAARASNTNANAAPGSITQIN-SEGLWIACKEGQLVLEMLQLPGKKAMS 300
Query: 241 ATEFING 247
E + G
Sbjct: 301 VGEILRG 307
>gi|189426266|ref|YP_001953443.1| methionyl-tRNA formyltransferase [Geobacter lovleyi SZ]
gi|238692146|sp|B3EAP0.1|FMT_GEOLS RecName: Full=Methionyl-tRNA formyltransferase
gi|189422525|gb|ACD96923.1| methionyl-tRNA formyltransferase [Geobacter lovleyi SZ]
Length = 316
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 72/307 (23%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+IIF GT A L TL + N+V + T+PD GRG KL PVK+ AL+H I + Q
Sbjct: 5 RIIFMGTPEFACPTLQTLLDRTENVVAVFTQPDRPKGRGQKLQPPPVKELALRHGIPVHQ 64
Query: 62 PISLK-------------------------------------------LNGKYHKIA--- 75
P ++ L +Y A
Sbjct: 65 PPKVRTPEVIEQIRALQPDLIVVIAFGQILPKALLEIPPQGCVNVHASLLPRYRGAAPLN 124
Query: 76 -----NETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIK 121
ET + + D+ + G I P++ +L +++ +L L+ +T+
Sbjct: 125 WCIVNGETETGVTTMLMDVGLDTGPMLLKKTTPIAPDEDIQSLHDRMSQLGAELLGETLD 184
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
++ ++ + Q + YAPL+KK ++DW A TI +I + +PGA T
Sbjct: 185 GLKTG--RIVPEAQDDSQSCYAPLLKKEHGLIDWQKPAVTIHNQIRGLSAWPGAVTSL-- 240
Query: 182 YQNKKKFLKIWKAHALSI-ESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
LK++++ SI + PGTI+ NGI V CG + + ELQ KK+
Sbjct: 241 ---GGAPLKLYRS---SIGQGAGTPGTIIATG-KNGIEVACGHGSLIIHELQAAGSKKMD 293
Query: 241 ATEFING 247
A F+ G
Sbjct: 294 AASFLAG 300
>gi|238788879|ref|ZP_04632669.1| Methionyl-tRNA formyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238722906|gb|EEQ14556.1| Methionyl-tRNA formyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 320
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 140/312 (44%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A + I +
Sbjct: 10 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQQGIPVF 69
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDT----------------- 100
QP SL+ H +A+ ++ DIM+V+ ILP
Sbjct: 70 QPKSLRPEENQHLVAD--------LKADIMVVVAYGLILPASVLAMPRLGCINVHGSLLP 121
Query: 101 ----SLTLQNKL---EKLSKILII---------DTIKKIEYDM------TKLFFK----- 133
+ +Q L + + + I+ D + KIE D+ L+ K
Sbjct: 122 RWRGAAPIQRSLWAGDAKTGVTIMQMDVGLDTGDMLHKIECDIQPQDTSATLYDKLAQLG 181
Query: 134 PQS------NIGESYAPLIKKNEAVLDWS-------------LSAKTIMRKINAFNPFPG 174
PQ + E A ++EA + ++ LSA + R I AFNP+P
Sbjct: 182 PQGLLVTLQQLAEGRAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWP- 240
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+Y++ ++ +K+W+A L+ PGTI++ + H GI V K V+ + +LQ
Sbjct: 241 -VSYFVV---DEQPVKVWQAQVLAAVDNVAPGTIIHADKH-GIQVATAKGVLNITQLQPA 295
Query: 235 NKKKISATEFIN 246
KK +SA + +N
Sbjct: 296 GKKAMSAADLLN 307
>gi|332531651|ref|ZP_08407548.1| methionyl-tRNA formyltransferase [Hylemonella gracilis ATCC 19624]
gi|332039014|gb|EGI75443.1| methionyl-tRNA formyltransferase [Hylemonella gracilis ATCC 19624]
Length = 352
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 16/180 (8%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M++M LP +D++ TL +KL L LI+ ++ + +L PQ G +YA I
Sbjct: 173 MLLMDRLPIAQDDSTGTLHDKLAALGGELIVRSLALAQG--GELRATPQPEQGVTYAHKI 230
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE-STKKP 205
K EA +DWS A+ I R+I AFNP PGA+T + ++ + LK+W+A A +T P
Sbjct: 231 DKAEAHIDWSQPAELIARRIRAFNPAPGAQT-LLDGEHGGEVLKLWQAQAAEASHATDAP 289
Query: 206 GT--------ILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFIS 257
GT +L + GI V CG+ + + ELQ+ K+++A +F+ G I +
Sbjct: 290 GTSAPSLPGLVLALGA-EGITVQCGQGQLLITELQRAGGKRLAAADFLRGTPLRIGALLG 348
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++++AGT A A L L+ + H I L+LT+PD +GRGMKL SPVK++AL+H I +
Sbjct: 1 MRVVYAGTPEFARAALQALHAAGHEIALVLTQPDRPAGRGMKLQASPVKQFALEHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GK+ A L + ++M+V ILP+
Sbjct: 61 QPRSLRLDGKFPDDAAAARTALEAAKANVMVVAAYGLILPQ 101
>gi|163851062|ref|YP_001639105.1| methionyl-tRNA formyltransferase [Methylobacterium extorquens PA1]
gi|163662667|gb|ABY30034.1| methionyl-tRNA formyltransferase [Methylobacterium extorquens PA1]
Length = 309
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 122/307 (39%), Gaps = 66/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A LD L+ H I + T+ +GRGM L SPV A + ++
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHTIAAVYTRAPARAGRGMALKLSPVHARAEALGLPVL 60
Query: 61 QPISLKLNGKYHKIANET--------------HKLLNKIEFDIMIVMG-ILPE------- 98
P +LK A ++L+ F + + G +LP
Sbjct: 61 TPTTLKSEEAAETFAGHGADVAVVVAYGMLLPQRILDLPRFGCLNLHGSLLPRWRGAAPI 120
Query: 99 ----------------------DTS-LTLQNKL---EKLSKILIIDTIKKIEYDM----- 127
DT + ++ +L E ++ + D + + D+
Sbjct: 121 QRAVMAGDAESGVGVMRMEAGLDTGPVAMEARLAITEGMTAGELHDALMPLGADLMGRAI 180
Query: 128 -----TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
L F PQ+ G YA I EA +DWS A + R IN +PFPGA Y+
Sbjct: 181 RALEQDGLTFTPQAEEGVVYAHKITNEEARIDWSRPAAEVARHINGLSPFPGA---YVEA 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
K ++ A++ E + PGT+L+ V CG ++LLEL++ K ++
Sbjct: 238 DLGKGPERVKVLRAVTAEGSGAPGTLLDAAG----TVACGTGAVRLLELRRAGKGGTASG 293
Query: 243 E-FINGC 248
E F+ G
Sbjct: 294 EAFLRGA 300
>gi|16078636|ref|NP_389455.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309448|ref|ZP_03591295.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313773|ref|ZP_03595578.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318697|ref|ZP_03599991.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322968|ref|ZP_03604262.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|402775818|ref|YP_006629762.1| methionyl-tRNA formyltransferase [Bacillus subtilis QB928]
gi|418033280|ref|ZP_12671757.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|452914703|ref|ZP_21963330.1| methionyl-tRNA formyltransferase [Bacillus subtilis MB73/2]
gi|6166189|sp|P94463.2|FMT_BACSU RecName: Full=Methionyl-tRNA formyltransferase
gi|2337802|emb|CAA74263.1| putative Fmt protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633945|emb|CAB13446.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|351469428|gb|EHA29604.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481000|gb|AFQ57509.1| Methionyl-tRNA formyltransferase [Bacillus subtilis QB928]
gi|407958980|dbj|BAM52220.1| methionyl-tRNA formyltransferase [Synechocystis sp. PCC 6803]
gi|407964557|dbj|BAM57796.1| methionyl-tRNA formyltransferase [Bacillus subtilis BEST7003]
gi|452117123|gb|EME07518.1| methionyl-tRNA formyltransferase [Bacillus subtilis MB73/2]
Length = 317
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 133/309 (43%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVLTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ L+ F I + +LPE
Sbjct: 63 PEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGITIMYMVEKLDAG---DMISKVEVDIEETDNVGTLHDKLSVAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + +I NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYTT-L 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LKIW + ++ +T +PGT++ V GI+V G LL ELQ KK++
Sbjct: 239 NGQN----LKIWASKKIAAPTTAEPGTVVAVE-KEGIIVATGNETALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|37528513|ref|NP_931858.1| methionyl-tRNA formyltransferase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|39931201|sp|Q7MYI1.1|FMT_PHOLL RecName: Full=Methionyl-tRNA formyltransferase
gi|36787951|emb|CAE17068.1| methionyl-tRNA formyltransferase [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 315
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPV------------ 48
++I+FAGT AA L+ L S+H +V +LT+PD +GRG KL SPV
Sbjct: 5 LRIVFAGTPDFAARHLEALLMSQHEVVGVLTRPDKPAGRGKKLTPSPVKVLAEERNITVF 64
Query: 49 ----------KKYALKHSIKIIQPIS-----------------LKLNG------------ 69
+++ LK ++ ++ L ++G
Sbjct: 65 QPATLRSEENQQWVLKQQPDVLIVVAYGLILPKVVLNIPELGCLNVHGSLLPRWRGAAPI 124
Query: 70 KYHKIANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
+ A +T + ++ DI + G I PEDTS +L KL + ++ T+
Sbjct: 125 QRSLWAGDTETGVTIMQMDIGLDTGDMLYKARCPITPEDTSASLYEKLANIGPDALLKTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I ++ + ++ + +YA + K EA ++W LSA + R I AFNP+P +
Sbjct: 185 SLITSGKSQPETQNENLV--TYAEKLSKEEARINWELSATHLERCIRAFNPWPMS----- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ + + +K+WKA A+ +++ +PGT+L + GI + ++ + +LQ KK +S
Sbjct: 238 FFEMEGQPIKVWKAEAIEEQTSVEPGTVLKAD-KEGIYIATADGILNITQLQPAGKKAMS 296
Query: 241 ATEFIN 246
A +N
Sbjct: 297 AANLLN 302
>gi|138894693|ref|YP_001125146.1| methionyl-tRNA formyltransferase [Geobacillus thermodenitrificans
NG80-2]
gi|166214898|sp|A4IM47.1|FMT_GEOTN RecName: Full=Methionyl-tRNA formyltransferase
gi|134266206|gb|ABO66401.1| Methionyl-tRNA formyltransferase [Geobacillus thermodenitrificans
NG80-2]
Length = 319
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 126/305 (41%), Gaps = 65/305 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT A +L L + + +V ++T+PD GR +L PVK A KH I ++QP
Sbjct: 4 IVFMGTPDFAVPVLRQLLDDGYRVVAVVTQPDKPKGRKRELVPPPVKVEAQKHGIPVLQP 63
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y ++ L+ F I + +LPE
Sbjct: 64 TKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGGAPIHY 123
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKLFFK-------- 133
T +T+ EKL I DT+ + ++ K
Sbjct: 124 AIWQGKTKTGVTIMYMAEKLDAGDMLTQVEVPIEETDTVGTLHDKLSAAGAKLLSETLPL 183
Query: 134 ---------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
PQ +YAP I++ + +DW+ + I I AF+P+P Y +Y
Sbjct: 184 LLEGNLAPIPQEEEKATYAPNIRREQERIDWAQPGEAIYNHIRAFHPWP---VTYTTYDG 240
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISATE 243
KIW + S PGTIL++ +GI+V G + IK+ ELQ KK+++A+E
Sbjct: 241 N--VWKIWWGEKVPAPSLASPGTILSLE-EDGIVVATGSETAIKITELQPAGKKRMAASE 297
Query: 244 FINGC 248
F+ G
Sbjct: 298 FLRGA 302
>gi|430759004|ref|YP_007209725.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430023524|gb|AGA24130.1| Methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 318
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 133/309 (43%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK+ AL+H I ++Q
Sbjct: 4 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVLTPPPVKEEALRHGIPVLQ 63
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ L+ F I + +LPE
Sbjct: 64 PEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 123
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 124 YSILQGKKKTGITIMYMVEKLDAG---DMISKVEVDIEETDNVGTLHDKLSVAGAKLLSE 180
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + +I NP+P A T +
Sbjct: 181 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYTT-L 239
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LKIW + ++ +T +PGT++ V GI+V G LL ELQ KK++
Sbjct: 240 NGQN----LKIWASKKIAAPTTAEPGTVVAVE-KEGIIVATGNETALLLTELQPAGKKRM 294
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 295 KGEDFVRGA 303
>gi|71905664|ref|YP_283251.1| methionyl-tRNA formyltransferase [Dechloromonas aromatica RCB]
gi|123747051|sp|Q47K50.1|FMT_DECAR RecName: Full=Methionyl-tRNA formyltransferase
gi|71845285|gb|AAZ44781.1| methionyl-tRNA formyltransferase [Dechloromonas aromatica RCB]
Length = 307
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 13/149 (8%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL ++L +L L+++ + K+ L +PQ G +YA I+K EA++DWS S
Sbjct: 159 DTTATLHDRLAELGARLVVEALGKL-----PLPAEPQPADGVTYAQKIEKAEAMIDWSKS 213
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R I AFNPFPGA+ + + + +K+W+A + + G IL V+ N I+
Sbjct: 214 AAELDRHIRAFNPFPGAQALF-----RGQTVKLWQAS--PVAGRGETGAILAVD-KNSII 265
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
+ CG+ + + ELQK K++ +F+ G
Sbjct: 266 IACGEGALAVTELQKAGGKRLPVQQFLAG 294
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AA L + N+ H + L+LT+PD +GRGM L S VKK AL H I++
Sbjct: 1 MKLIFAGTPEFAAQALQGIVNAGHEVALVLTQPDRPAGRGMALQPSAVKKVALTHGIEVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP++LK E + + +IM+V ILP+
Sbjct: 61 QPLTLK--------DAEAQARIAAVGAEIMVVAAYGLILPQ 93
>gi|221069825|ref|ZP_03545930.1| methionyl-tRNA formyltransferase [Comamonas testosteroni KF-1]
gi|220714848|gb|EED70216.1| methionyl-tRNA formyltransferase [Comamonas testosteroni KF-1]
Length = 321
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M V+ LP DT+ +L +KL L LI++ ++ L PQ G +YA I
Sbjct: 155 MCVIERLPIAAHDTTASLHDKLATLGGRLIVEALELAA--CGGLPRTPQPAAGVTYAHKI 212
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
+K E+++DWS SA I R++ AFNPFPG T + +K+W+A A E + PG
Sbjct: 213 EKAESLIDWSESADVIARRLRAFNPFPGGATSL-----GGEAIKVWEARAE--EGSGAPG 265
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+L+ + G+ V CG V+ + LQ+ K+++A +F+ G
Sbjct: 266 MVLSADAQ-GVRVACGSGVLNMTLLQRAGGKRLAAGDFLRG 305
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT A L++L + + L+LT+PD +GRGMKL S VK+ AL+ I +
Sbjct: 1 MKVIFAGTPEFARVALESLLAAGFEVPLVLTQPDRPAGRGMKLQASAVKQCALEQGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L+GKY + A + + D+M+V ILP+
Sbjct: 61 QPLSLRLDGKYPEDAAAAKAAIEAAQADVMVVAAYGLILPQ 101
>gi|196247687|ref|ZP_03146389.1| methionyl-tRNA formyltransferase [Geobacillus sp. G11MC16]
gi|196212471|gb|EDY07228.1| methionyl-tRNA formyltransferase [Geobacillus sp. G11MC16]
Length = 321
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 126/305 (41%), Gaps = 65/305 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT A +L L + + +V ++T+PD GR +L PVK A KH I ++QP
Sbjct: 6 IVFMGTPDFAVPVLRQLLDDGYRVVAVVTQPDKPKGRKRELVPPPVKVEAQKHGIPVLQP 65
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y ++ L+ F I + +LPE
Sbjct: 66 TKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGGAPIHY 125
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKLFFK-------- 133
T +T+ EKL I DT+ + ++ K
Sbjct: 126 AIWQGKTKTGVTIMYMAEKLDAGDMLTQVEVPIEETDTVGTLHDKLSAAGAKLLSETLPL 185
Query: 134 ---------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
PQ +YAP I++ + +DW+ + I I AF+P+P Y +Y
Sbjct: 186 LLEGNLAPIPQEEEKATYAPNIRREQERIDWAQPGEAIYNHIRAFHPWP---VTYTTYDG 242
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISATE 243
KIW + S PGTIL++ +GI+V G + IK+ ELQ KK+++A+E
Sbjct: 243 N--VWKIWWGEKVPAPSLASPGTILSLE-EDGIVVATGSETAIKITELQPAGKKRMAASE 299
Query: 244 FINGC 248
F+ G
Sbjct: 300 FLRGA 304
>gi|210617213|ref|ZP_03291457.1| hypothetical protein CLONEX_03679 [Clostridium nexile DSM 1787]
gi|210149414|gb|EEA80423.1| hypothetical protein CLONEX_03679 [Clostridium nexile DSM 1787]
Length = 311
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 127/307 (41%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI--- 57
MK+IF GT + L+ L + H++VL +T+PD GRG ++ F+PVK+ ALKH I
Sbjct: 1 MKVIFMGTPDFSVGTLEALIEAGHDVVLAVTQPDKPKGRGKEMQFTPVKECALKHGIPVY 60
Query: 58 ---KIIQPISLKLNGKYHK----------------------------------------- 73
K+ +P ++ KY
Sbjct: 61 QPKKVREPECIEELRKYEADIMVVIAFGQILQKEILEMTPYGCVNVHASLLPKYRGAAPI 120
Query: 74 ----IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
I ET + ++ D + G I ++T +L +KL L ++T+
Sbjct: 121 QWSIIDGETVTGVTTMQMDEGLDTGDMLLKTEIVIEEKETGGSLHDKLAAAGAKLCVETL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
K +E + +S +YA ++ K+ +DW+ SAK I R I P+P A T +
Sbjct: 181 KALEEKTVTPVKQGESPT--AYARMLDKHLGNIDWNQSAKEIERLIRGLTPWPSAYTMW- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K +KIW A PGTI+ V V ++K+LELQ KK++
Sbjct: 238 ----NGKTMKIWSAEVEETSGEGVPGTIVKVE-KEAFSVQTKDGLLKVLELQIPGKKRMD 292
Query: 241 ATEFING 247
A F+ G
Sbjct: 293 AGAFLRG 299
>gi|357053203|ref|ZP_09114303.1| methionyl-tRNA formyltransferase [Clostridium clostridioforme
2_1_49FAA]
gi|355385970|gb|EHG33014.1| methionyl-tRNA formyltransferase [Clostridium clostridioforme
2_1_49FAA]
Length = 328
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 84/322 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT + L L H ++ ++T+PD GRG ++ +PVK A+++ I +
Sbjct: 1 MRIVFMGTPDFSVPALKALVEVGHQVIAVVTQPDKPKGRGKEVQMTPVKIQAMEYGIPVY 60
Query: 61 QPISLK-------LNG------------------------------------KYHKIA-- 75
QP ++ L G KY A
Sbjct: 61 QPAKVREASFVEVLQGMEADVYVVIAFGQLLPKAVLELPKYGCINIHASLLPKYRGAAPI 120
Query: 76 ------NETHKLLNKIEFDIMIVMG------ILP---EDTSLTLQNKLEKLSKILIIDTI 120
E + + D+ + G ++P ++T +L +KL LI+ T+
Sbjct: 121 QWCVIDGERETGITTMMMDVGLDTGDMLEKTVIPIEEKETGGSLHDKLSLAGGALILSTL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
KK+E L PQ++ G YA ++ K+ +DW+ SA +I R I NP+P A T +
Sbjct: 181 KKLEEG--TLVRTPQTDEGTCYAKMLTKSLGDIDWNQSAVSIERLIRGLNPWPSAYTLW- 237
Query: 181 SYQNKKKFLKIWKAH--------------ALSIESTKKPGTILNVNFHNGILVVC-GKNV 225
K +KIW A + E+ PGT++ + H+ LVVC G +
Sbjct: 238 ----NGKTIKIWSADVTTSREAAAFLSESGVPSETGITPGTVVCSDKHS--LVVCTGDGL 291
Query: 226 IKLLELQKNNKKKISATEFING 247
+ + ELQ KK++ F+ G
Sbjct: 292 LSVRELQMEGKKRMDTPAFLRG 313
>gi|238792968|ref|ZP_04636598.1| Methionyl-tRNA formyltransferase [Yersinia intermedia ATCC 29909]
gi|238727822|gb|EEQ19346.1| Methionyl-tRNA formyltransferase [Yersinia intermedia ATCC 29909]
Length = 320
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 97/170 (57%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE DI PEDTS TL +KL +L ++ T++++ T+ + ++
Sbjct: 152 DTGDMLHKIECDIQ------PEDTSATLYDKLAQLGPQGLLVTLQQLAEGSTQPEVQNEA 205
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P +Y++ ++ +K+W+A
Sbjct: 206 QV--TYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWP--VSYFVV---DEQPIKVWQAQV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ KPGTI++ + H GI V V+ + +LQ KK +SA + +N
Sbjct: 259 FAAVEDIKPGTIIHADKH-GIQVATADGVLNITQLQPAGKKAMSAADLLN 307
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A +H I ++
Sbjct: 10 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKILAEQHGIPVL 69
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK H +A+ + DIM+V+ ILP
Sbjct: 70 QPKSLKPEENQHLVAD--------LNADIMVVVAYGLILP 101
>gi|123444065|ref|YP_001008035.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420260315|ref|ZP_14762998.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|166215598|sp|A1JRZ2.1|FMT_YERE8 RecName: Full=Methionyl-tRNA formyltransferase
gi|122091026|emb|CAL13909.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512131|gb|EKA25983.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 315
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 96/170 (56%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE DI PEDTS TL +KL +L ++ T++++ + + ++
Sbjct: 147 DTGDMLHKIECDIQ------PEDTSATLYDKLAQLGPQGLLVTLQQLAEGSAQPEVQDEA 200
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P +Y++ ++ +K+W+A
Sbjct: 201 QV--TYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWP--VSYFVV---DEQPIKVWQAQV 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L+ PGTI++ + H GI V V+ + +LQ KK +SA + +N
Sbjct: 254 LATVDNAAPGTIIHADKH-GIQVATADGVLNITQLQPAGKKAMSAADLLN 302
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A +H I I
Sbjct: 5 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHDIPIF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + DIM+V+ ILP
Sbjct: 65 QPKSLRPEENQHLVAD--------LNADIMVVVAYGLILP 96
>gi|332163228|ref|YP_004299805.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325667458|gb|ADZ44102.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861819|emb|CBX71991.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica W22703]
Length = 315
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 96/170 (56%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE DI PEDTS TL +KL +L ++ T++++ + + ++
Sbjct: 147 DTGDMLHKIECDIQ------PEDTSATLYDKLAQLGPQGLLVTLQQLAEGSAQPEVQDEA 200
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P +Y++ ++ +K+W+A
Sbjct: 201 QV--TYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWP--VSYFVV---DEQPIKVWQAQV 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L+ PGTI++ + H GI V V+ + +LQ KK +SA + +N
Sbjct: 254 LATVDNAAPGTIIHADKH-GIQVATADGVLNITQLQPAGKKAMSAADLLN 302
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A +H I I
Sbjct: 5 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTSSPVKVLAEQHDIPIF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L+ + DIM+V+ ILP
Sbjct: 65 QPKSLR--------PEENQYLVADLNADIMVVVAYGLILP 96
>gi|307132807|ref|YP_003884823.1| methionyl-tRNA formyltransferase [Dickeya dadantii 3937]
gi|306530336|gb|ADN00267.1| Methionyl-tRNA formyltransferase [Dickeya dadantii 3937]
Length = 313
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 99/170 (58%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE I LP+DTS TL +KL KL +++T+ ++ ++ + Q
Sbjct: 145 DTGAMLHKIECPI------LPDDTSATLYDKLAKLGPQGLMETLAQLS--ASQATAEAQD 196
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDW LSAK + R I AFNP+P +Y++ +++ +K+WKA A
Sbjct: 197 DSLATYAEKLSKEEARLDWQLSAKQLERCIRAFNPWP--VSYFLI---EEQPVKVWKAEA 251
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L+ ++PGTIL + +GI + V+ + LQ + KK +SA + +N
Sbjct: 252 LNTSHQQQPGTILAAD-KDGIRIATADGVLNIQILQPSGKKSMSAQDLLN 300
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +SEH +V + T+PD +GRG KL SPVK A +H+I +
Sbjct: 3 LRIIFAGTPDFAAQHLAGLLSSEHEVVGVFTQPDRPAGRGNKLTPSPVKALAEQHAIPVF 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 63 QPKSLR--------PVENQQLVAELGADVMVVVAYGLILPQ 95
>gi|322831105|ref|YP_004211132.1| methionyl-tRNA formyltransferase [Rahnella sp. Y9602]
gi|384256273|ref|YP_005400207.1| methionyl-tRNA formyltransferase [Rahnella aquatilis HX2]
gi|321166306|gb|ADW72005.1| methionyl-tRNA formyltransferase [Rahnella sp. Y9602]
gi|380752249|gb|AFE56640.1| methionyl-tRNA formyltransferase [Rahnella aquatilis HX2]
Length = 311
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+E DI LPEDTS +L NKL +L +++T++++ K + +
Sbjct: 143 DTGDMLHKVECDI------LPEDTSASLYNKLAELGPQGMLETLQQLANGSAKPEVQSEE 196
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
++ +YA + K EA LDW+LSA+ + R I AFNP+P + I Q +K+W+A
Sbjct: 197 HV--TYAEKLSKEEARLDWNLSAEQLERCIRAFNPWP-VSFFMIDDQP----VKVWQAEC 249
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
LS +S+ PGTI+ + GI + ++ + +LQ + KK +SA + +N
Sbjct: 250 LSGKSSAAPGTIVAAD-KKGIQIATSDGILNITQLQPSGKKAMSAQDLLN 298
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AA LD L +SEH +V + T+PD +GRG KL SPVK A H I +
Sbjct: 1 MRIIFAGTPDFAARHLDALLSSEHQVVGVFTQPDRPAGRGNKLTASPVKVLAQTHDIPVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L++ +E DIM+V+ ILP
Sbjct: 61 QPKSLR--------PEENQSLVSALEADIMVVVAYGLILP 92
>gi|320116146|ref|YP_004186305.1| methionyl-tRNA formyltransferase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|319929237|gb|ADV79922.1| methionyl-tRNA formyltransferase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 309
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 135/316 (42%), Gaps = 86/316 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L L+ +++ ++T+PD GRGMK +FSPVK+ AL+ ++I+
Sbjct: 1 MKIVFMGTPEFAVPSLQKLFEEGYDVAAVVTQPDKQKGRGMKFSFSPVKEVALQKGVEIL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEF---DIMIVMG---ILPE---------------- 98
QP +K N ++ LN++E D ++V+ ILPE
Sbjct: 61 QPEKIKNNPEF----------LNRLEVINPDAIVVVAYGKILPEEILTLPKYGCINVHAS 110
Query: 99 --------------------DTSLT--LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +T L +K +LI +I +E D + S
Sbjct: 111 LLPKYRGAAPINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLS 170
Query: 137 NIGE-------------SYAPLIKKNEAV------------LDWSLSAKTIMRKINAFNP 171
+G S P+ ++ E +DW+ +A+ I I P
Sbjct: 171 RLGAEVLIETLKGLEKGSLTPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKP 230
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
+PG T+Y K LKIWK + ++ GT+L ++V C K+ +K++E+
Sbjct: 231 WPGCYTFY-----GDKMLKIWKGEIVEYNGNEENGTVLKSK--GDLIVKCDKDALKIVEI 283
Query: 232 QKNNKKKISATEFING 247
Q+ KK+ E++ G
Sbjct: 284 QQEGSKKMGIREYLIG 299
>gi|54295431|ref|YP_127846.1| hypothetical protein lpl2517 [Legionella pneumophila str. Lens]
gi|73919402|sp|Q5WTK7.1|FMT_LEGPL RecName: Full=Methionyl-tRNA formyltransferase
gi|53755263|emb|CAH16757.1| hypothetical protein lpl2517 [Legionella pneumophila str. Lens]
Length = 314
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 134/312 (42%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ ++FAGT LD L S H++ + T+PD +GRG KL SPVK++A+ H I +
Sbjct: 4 LTVVFAGTPEFGLPCLDALIQSRHHLKAVYTQPDRPAGRGRKLQESPVKEWAINHQISVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP LN K + +E L+ ++ D+M+V+ ILP+
Sbjct: 64 QP----LNFKNQEAVDE----LSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L L K + + DT + + K+
Sbjct: 116 RWRGASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKAACPVTSSDTAGSLHDKLAKMS 175
Query: 132 FKPQSNIGES-----------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
KP ++ E+ YA I K EA ++W SA I RKI AFNP+P
Sbjct: 176 VKPLLDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPV 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T + L+I +A A I ST+ PG +LN++ G+LV N + + ++Q
Sbjct: 236 AYTLA-----GELMLRIHQAKATDIMSTEMPGMVLNID-KTGMLVATSDNALLVEKIQFP 289
Query: 235 NKKKISATEFIN 246
K IS +++N
Sbjct: 290 GAKVISVRDWLN 301
>gi|148244857|ref|YP_001219551.1| methionyl-tRNA formyltransferase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326684|dbj|BAF61827.1| methionyl-tRNA formyltransferase [Candidatus Vesicomyosocius
okutanii HA]
Length = 322
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 145/321 (45%), Gaps = 74/321 (23%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I FAGT+ + AIL+ L N++++IV + +PD GRG L PVK+ AL++++KI Q
Sbjct: 11 RIAFAGTTKFSVAILEILINAKYDIVGVYCQPDRPKGRGRILTACPVKEKALEYNLKIFQ 70
Query: 62 PISL----------KLNG------KYHKIANETHKLLNKIEFDIM-IVMGILPE------ 98
P +L KLN Y +I E ++LN +++ + I +LP
Sbjct: 71 PENLQSTKTQQALAKLNADVMIVVSYGQILPE--RILNMLKYGCLNIHSSLLPRWRGAAP 128
Query: 99 ---------------------------------------DTSLTLQNKLEKLSKILIIDT 119
DT+ +L NKL KL I++
Sbjct: 129 IQRAILAGDKITGISIIQMNKILDTGDILLEKNCTITLNDTTQSLHNKLVKLGSNAIVEV 188
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ ++ L QS +YA +KKNEA +DW+ SA I +KI AFNP+P +T+
Sbjct: 189 LNNLD----NLSPTEQSKNNITYAKKLKKNEAWIDWTQSAIQIHQKIRAFNPYPITQTHA 244
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNG--ILVVCGKNVIKLLELQKNNKK 237
S + K L+I+ A + PG I+ HN +V G + L +Q + KK
Sbjct: 245 SSNRFATKILRIFSASIVVTNDNYSPGNIIK---HNKKICIVATGDGALSLETVQLSGKK 301
Query: 238 KISATEFINGCIKNIKYFISV 258
++ +F N K K FI+
Sbjct: 302 VLNIKDFSNA-YKLTKLFITC 321
>gi|385810727|ref|YP_005847123.1| methionyl-tRNA formyltransferase [Ignavibacterium album JCM 16511]
gi|383802775|gb|AFH49855.1| Methionyl-tRNA formyltransferase [Ignavibacterium album JCM 16511]
Length = 307
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 76/310 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L +Y+S H ++ ++T PD GRG K+ F+PVKK+A++H+I +
Sbjct: 1 MKIVFMGTPDFAIPSLKAVYHSNHQLIGVVTTPDKERGRGQKVTFTPVKKFAVEHNIPVY 60
Query: 61 QPISLKLNGKY-HKIANETHKLLNKIEFDIM--------------IVMGILPE------- 98
QP LK N ++ ++ N L + F I+ + +LP+
Sbjct: 61 QPEKLKDNSEFIEQLKNLQPDLFVVVAFRILPKEIFEIPKYGSFNLHASLLPKYRGAAPI 120
Query: 99 ---------DTSLT--------------LQNKLE------------KLSKI---LIIDTI 120
+T LT LQ K++ +LS++ ++I TI
Sbjct: 121 QWALINGETETGLTTFRLAEQVDTGNIYLQLKVQIHPEDNFGTLHDRLSELGAEVVIKTI 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
IE +L PQ + S AP I K +++W+ A+ I + +P+P A ++I
Sbjct: 181 DLIESGNYQLL--PQDDSLASPAPKITKEICMIEWNKPAEEIHNLVRGLSPYPAA--FFI 236
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNG---ILVVCGKNVIKLLELQKNNKK 237
+ KK +K+++ + K FH ++V CGK+ IK+LE+Q KK
Sbjct: 237 ---HNKKVIKVYRTEIVKDMHLKL------SEFHQTKKELIVGCGKDAIKILEIQLEGKK 287
Query: 238 KISATEFING 247
++S EF+ G
Sbjct: 288 RMSTEEFLRG 297
>gi|227328918|ref|ZP_03832942.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 315
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 143/306 (46%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
++IIFAGT AA LD L +S + +V + T+PD +GRG KL F
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGNEVVGVFTQPDRPAGRGNKLTPSPVKVLAEQHSIPVF 64
Query: 46 SP---------VKKYALKHSIKII--------QPI-------SLKLNGKYHKI------- 74
P AL + ++ QP+ + ++G +
Sbjct: 65 QPKSLRPEENQAMVQALNADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAAPI 124
Query: 75 -----ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
A ++ + ++ D+ + G IL +DTS TL +KL +L +++T+
Sbjct: 125 QRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILQQDTSATLYDKLAELGPRGLLETL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++ D + + + Q++ +YA + K EA L+W LSA+ + R I AFNP+P +Y+I
Sbjct: 185 EQL-ADGSAVA-EVQNDALATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWP--VSYFI 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ +K+WKA ++ E +PGTI+ + GI V ++ + ELQ KK +
Sbjct: 241 V---DEQPVKVWKAEVITKEHGSQPGTIIQAD-KQGIQVATADGILNIQELQPAGKKVMG 296
Query: 241 ATEFIN 246
A + +N
Sbjct: 297 AQDLLN 302
>gi|421348926|ref|ZP_15799297.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-25]
gi|395957119|gb|EJH67704.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-25]
Length = 315
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|229515916|ref|ZP_04405373.1| methionyl-tRNA formyltransferase [Vibrio cholerae TMA 21]
gi|229347016|gb|EEO11978.1| methionyl-tRNA formyltransferase [Vibrio cholerae TMA 21]
Length = 315
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|229524947|ref|ZP_04414352.1| methionyl-tRNA formyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229338528|gb|EEO03545.1| methionyl-tRNA formyltransferase [Vibrio cholerae bv. albensis
VL426]
Length = 315
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|227824653|ref|ZP_03989485.1| methionyl-tRNA formyltransferase [Acidaminococcus sp. D21]
gi|352683749|ref|YP_004895733.1| methionyl-tRNA formyltransferase [Acidaminococcus intestini
RyC-MR95]
gi|226905152|gb|EEH91070.1| methionyl-tRNA formyltransferase [Acidaminococcus sp. D21]
gi|350278403|gb|AEQ21593.1| methionyl-tRNA formyltransferase [Acidaminococcus intestini
RyC-MR95]
Length = 312
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L K+ I PE T L ++L++ L++ TI + + +PQ
Sbjct: 144 DTGAMLEKVSVPIG------PEMTQGELHDELKEKGAALLLQTIDDLSAG--TVTAEPQE 195
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+YA LI ++ LDW+LSA T+ +I AFNP+PG TY I K+ LK+WK+H
Sbjct: 196 ETKATYASLITRDMEHLDWTLSADTLHNQIRAFNPWPG--TYTILPDGKR--LKVWKSHV 251
Query: 197 LSIESTK-KPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + + +PG IL + G + CG V+ +LE Q K+ ++A F+NG
Sbjct: 252 LPGSAEQAQPGQILEAD-SKGFHIACGTGVLAVLECQPEGKRAMAAQSFVNG 302
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 1 MKIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
MK++F GT AA+ L L + H I+ ++T+PD GRG KL S VK+YAL ++ +
Sbjct: 1 MKLVFMGTPEFAASSLRALVKQQKHEILAVVTQPDRPKGRGHKLMMSAVKEYALAVNLPV 60
Query: 60 IQPISLK 66
+QP +K
Sbjct: 61 LQPERVK 67
>gi|300914476|ref|ZP_07131792.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X561]
gi|307724288|ref|YP_003904039.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X513]
gi|300889411|gb|EFK84557.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X561]
gi|307581349|gb|ADN54748.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X513]
Length = 309
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 135/316 (42%), Gaps = 86/316 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L L+ +++ ++T+PD GRGMK +FSPVK+ AL+ ++I+
Sbjct: 1 MKIVFMGTPEFAVPSLQKLFEEGYDVAAVVTQPDKQKGRGMKFSFSPVKEVALQKGVEIL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEF---DIMIVMG---ILPE---------------- 98
QP +K N ++ LN++E D ++V+ ILPE
Sbjct: 61 QPEKIKNNPEF----------LNRLEEINPDAIVVVAYGKILPEEILTLPKYGCINVHAS 110
Query: 99 --------------------DTSLT--LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +T L +K +LI +I +E D + S
Sbjct: 111 LLPKYRGAAPINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLS 170
Query: 137 NIGE-------------SYAPLIKKNEAV------------LDWSLSAKTIMRKINAFNP 171
+G S P+ ++ E +DW+ +A+ I I P
Sbjct: 171 RLGAEVLIETLKGLEKGSLTPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKP 230
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
+PG T+Y K LKIWK + ++ GT+L ++V C K+ +K++E+
Sbjct: 231 WPGCYTFY-----GDKMLKIWKGEIVEYNGNEENGTVLKSK--GDLIVKCDKDALKIVEI 283
Query: 232 QKNNKKKISATEFING 247
Q+ KK+ E++ G
Sbjct: 284 QQEGSKKMGIREYLIG 299
>gi|398818323|ref|ZP_10576915.1| methionyl-tRNA formyltransferase [Brevibacillus sp. BC25]
gi|398028091|gb|EJL21615.1| methionyl-tRNA formyltransferase [Brevibacillus sp. BC25]
Length = 316
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 142/313 (45%), Gaps = 69/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT A + L + + +N++ ++T+PD GR L PVK+ AL+H + ++Q
Sbjct: 5 RILFMGTPDFAVSSLTAVLEAGYNVIGVVTQPDRPVGRKQVLTPPPVKEAALRHGLLVLQ 64
Query: 62 PISLK----------------LNGKYHKIANETHKLLNKIEFDIMIV-MGILPE------ 98
P +K + Y +I + KLL+ ++ + V +LP+
Sbjct: 65 PEKIKAEEALEEVLALEPDLIITAAYGQILPK--KLLDAPKYGCINVHASLLPKYRGGAP 122
Query: 99 ----------DTSLTLQNKLEK------LSKILII----DTIKKIEYDMT---------- 128
+T +T+ +E LSK+++ DT+ + +
Sbjct: 123 IHKSIVEGEAETGVTIMYMVEALDAGDMLSKVVVPIEERDTVGTLHDKLAAAGSELLMAT 182
Query: 129 -------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+L + Q + ++AP IK+ + +DWS SA+ I ++ NP+P A T
Sbjct: 183 VPRLFAGELVAEQQDHSAATFAPNIKRTDEKIDWSRSAEQIYNQVRGLNPWPVAFTTC-- 240
Query: 182 YQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ K K+W + K+PGTI+ +GI+V CG +K+ ELQ KK++S
Sbjct: 241 ---EGKIWKLWWVEKMPTSGEGKEPGTIIACE-EDGIVVSCGSGAVKITELQPEGKKRMS 296
Query: 241 ATEFINGCIKNIK 253
A +F+ G +I+
Sbjct: 297 ALDFLRGAGSSIE 309
>gi|238752658|ref|ZP_04614129.1| Methionyl-tRNA formyltransferase [Yersinia rohdei ATCC 43380]
gi|238709085|gb|EEQ01332.1| Methionyl-tRNA formyltransferase [Yersinia rohdei ATCC 43380]
Length = 320
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 14/173 (8%)
Query: 74 IANETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFK 133
I +T +L+KIE DI PEDTS TL +KL +L ++ T++++ + +
Sbjct: 149 IGLDTGDMLHKIECDIQ------PEDTSATLYDKLAELGPQGLLVTLQQLAAGNARPEVQ 202
Query: 134 PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWK 193
++ + +YA + K EA LDWSLSA + R I AFNP+P +Y++ +++ +K+W+
Sbjct: 203 DEAQV--TYAEKLSKEEAKLDWSLSAIQLERCIRAFNPWP--VSYFVV---EEQPVKVWQ 255
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
A + PGT+++ + H GI V + V+ + +LQ KK +SA + +N
Sbjct: 256 AQVIDTTENAAPGTVIHADKH-GIQVATAEGVLNITQLQPAGKKPMSAADLLN 307
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A +H I +
Sbjct: 10 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTSSPVKVLAEQHDIPVF 69
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + DIM+V+ ILP
Sbjct: 70 QPKSLRPEENQHLVAD--------LNADIMVVVAYGLILP 101
>gi|345859753|ref|ZP_08812087.1| methionyl-tRNA formyltransferase [Desulfosporosinus sp. OT]
gi|344327210|gb|EGW38654.1| methionyl-tRNA formyltransferase [Desulfosporosinus sp. OT]
Length = 330
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 138/330 (41%), Gaps = 93/330 (28%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK------ 54
M+++F GT A L L H +V + T+PD +GRG L SPVK A +
Sbjct: 1 MRLVFMGTPDFAVPSLQALVKGGHEVVGVFTQPDRPAGRGKNLKPSPVKVAAEELGLPIF 60
Query: 55 -----------HSIKIIQPIS--------------LKLNGK------------YHKIA-- 75
++ + P S L+L K Y A
Sbjct: 61 QPEKIKTPEGIQQLRALAPESIIVVAYGQILSREILQLPSKGCINVHASLLPSYRGAAPI 120
Query: 76 ------NETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
ETH + + D + G I E T+ + ++L L L+IDT+
Sbjct: 121 HWAVMKGETHTGVTTMLMDEGLDTGDMLLKGEILISNEATTGEIHDELASLGGKLLIDTL 180
Query: 121 KKIEYDMTKLFFKPQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
++E + +LF PQ+ G+S YAPL+K+ LDWS A + +I NP+PGA T +
Sbjct: 181 SELE--LGRLFATPQT--GKSNYAPLLKREHEQLDWSRKAAELHHQIRGLNPWPGAFTTF 236
Query: 180 ISYQNKKKFLKIWKAHA-------LSIESTK---------------KPGTILNVNFHNGI 217
+ + LKIW++ + E T+ +PG IL V + +
Sbjct: 237 -----RGENLKIWRSAPFLGTDKNVGAEGTRFEPRISNFEPRVKAAEPGQILQV-LEDSL 290
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V G V+++LE+Q K+ + A +F NG
Sbjct: 291 VVQTGDGVLQILEVQPAGKRAMLARDFFNG 320
>gi|254491134|ref|ZP_05104315.1| methionyl-tRNA formyltransferase [Methylophaga thiooxidans DMS010]
gi|224463647|gb|EEF79915.1| methionyl-tRNA formyltransferase [Methylophaga thiooxydans DMS010]
Length = 309
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS L ++L KL ++D + ++D + KPQ + YA ++K EAV+DW
Sbjct: 159 DTSQNLHDRLAKLGAQTLLDCLD--DFDTFQEAAKPQDDTHSCYAEKLQKQEAVIDWQQP 216
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A T+ R+INAFNP+P A+T + + +IW+A + I+S G I+ V+ GI
Sbjct: 217 AGTLSRQINAFNPWPVAQTVW-----RGDTFRIWQAEHIDIKSDASAGDIIAVS-KTGID 270
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V K VI++ +LQ K+ + T+F+N
Sbjct: 271 VATAKGVIRIKQLQVPGKRAMPVTDFLNA 299
>gi|442804801|ref|YP_007372950.1| methionyl-tRNA formyltransferase Fmt [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442740651|gb|AGC68340.1| methionyl-tRNA formyltransferase Fmt [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 316
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 66/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A L+ L N+ ++V ++T+PD GRG K++FSPVK+ ALK++I ++
Sbjct: 1 MRIVFMGTPEFAVPSLEILINNGMDVVAVVTQPDKPRGRGYKVSFSPVKECALKYNIPVM 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL---------- 108
QP + + ++ L F + +L P+ ++ + L
Sbjct: 61 QPEKIGSSDSVQQLKEMAPDLFVTCAFGQFLTQKVLDIPKYGTVNVHGSLLPKYRGAAPI 120
Query: 109 -------EKLSKILIIDTIKK-------------IEYDMT-------------KLFFK-- 133
EK + + + T+ K I+ DMT +L +
Sbjct: 121 QWAIINGEKTTGVTTMLTVLKMDAGDILLSREIPIDDDMTAGQLHDKMSIIGAELLLETI 180
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
PQ+ +YAP I + ++W A I + +P+PGA SY
Sbjct: 181 RRIEKGTITPIPQNEAEATYAPRIVRETGRINWDADATAIHNLVRGTDPWPGA----YSY 236
Query: 183 QNKKKFLKIWKA--HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
N K+ ++IWK + S KPGTI+ V + I V GK + +LE+Q +N K+++
Sbjct: 237 LNGKR-MRIWKTKVRDAGLISGNKPGTIIEVG-KSFITVQAGKGAVNVLEIQCDNGKRMT 294
Query: 241 ATEFING 247
+++ G
Sbjct: 295 VEQYLCG 301
>gi|226313316|ref|YP_002773210.1| methionyl-tRNA formyltransferase [Brevibacillus brevis NBRC 100599]
gi|226096264|dbj|BAH44706.1| methionyl-tRNA formyltransferase [Brevibacillus brevis NBRC 100599]
Length = 316
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 142/313 (45%), Gaps = 69/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT A + L + + +N++ ++T+PD GR L PVK+ AL+H + ++Q
Sbjct: 5 RILFMGTPDFAVSSLTAVLEAGYNVIGVVTQPDRPVGRKQVLTPPPVKEAALRHGLLVLQ 64
Query: 62 PISLK----------------LNGKYHKIANETHKLLNKIEFDIMIV-MGILPE------ 98
P +K + Y +I + KLL+ ++ + V +LP+
Sbjct: 65 PEKIKAEEALEEVLALKPDLIITAAYGQILPK--KLLDAPKYGCINVHASLLPKYRGGAP 122
Query: 99 ----------DTSLTLQNKLEK------LSKILII----DTIKKIEYDMT---------- 128
+T +T+ +E LSK+++ DT+ + +
Sbjct: 123 IHKSIVEGEAETGVTIMYMVEALDAGDMLSKVVVPIEERDTVGTLHDKLAAAGSELLIAT 182
Query: 129 -------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+L + Q + ++AP IK+ + +DWS SA+ I ++ NP+P A T
Sbjct: 183 VPPLLAGELVAEQQDHSEATFAPNIKRTDEKIDWSRSAEQIYNQVRGLNPWPVAFTTC-- 240
Query: 182 YQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ K K+W + K+PGTI+ +GI+V CG +K+ ELQ KK++S
Sbjct: 241 ---EGKIWKLWWVEKMPASGEGKEPGTIIACE-EDGIVVACGSGAVKITELQPEGKKRMS 296
Query: 241 ATEFINGCIKNIK 253
A +F+ G +I+
Sbjct: 297 ALDFLRGAGSSIE 309
>gi|449094265|ref|YP_007426756.1| methionyl-tRNA formyltransferase [Bacillus subtilis XF-1]
gi|449028180|gb|AGE63419.1| methionyl-tRNA formyltransferase [Bacillus subtilis XF-1]
Length = 317
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVLTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ L+ F I + +LPE
Sbjct: 63 PEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAG---DMIAKVEVDIEETDNVGTLHDKLSVAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + ++ NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQVRGLNPWPVAYTT-L 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W++ +T +PGT++ V GI+V G LL ELQ KK++
Sbjct: 239 NGQN----LKVWESKKTPAPTTAEPGTVVAVE-KEGIIVATGNETALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|407977639|ref|ZP_11158476.1| methionyl-tRNA formyltransferase [Bacillus sp. HYC-10]
gi|407415892|gb|EKF37473.1| methionyl-tRNA formyltransferase [Bacillus sp. HYC-10]
Length = 317
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 133/308 (43%), Gaps = 69/308 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK ALKH I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLQTLITEGYEVVGVVTQPDRPKGRKRVLTPPPVKVEALKHGIPVLQ 62
Query: 62 PISLKLNGKYHKIAN--------------ETHKLLNKIEFDIMIV-MGILPE-------- 98
P ++L+ + K+ +LL++ EF + V +LPE
Sbjct: 63 PEKVRLDEEIDKVLALKPDLIVTAAFGQILPKRLLDEPEFGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL----------------FFK- 133
T +T+ +EKL D I K+E ++ +L K
Sbjct: 123 YAILQGKKKTGVTIMYMVEKLDA---GDMISKVEVEIDELDNVGTLHDKLSVAGAALLKD 179
Query: 134 -------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
PQ+ +YAP IK+ + LDW+ + + ++ NP+P A T +
Sbjct: 180 TIPNILSRSISPIPQNEEAATYAPNIKREQERLDWTKPGEVLYNQVRGLNPWPVAYTEWN 239
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
LK+W+A +S+++ ++PG ++ + ++ + + L +Q KKK+S
Sbjct: 240 GAN-----LKVWEAKKVSLQTKEEPGKVIELQKEGPVIGTGNEQGLLLTSVQPAGKKKMS 294
Query: 241 ATEFINGC 248
+F+ G
Sbjct: 295 GEDFLRGA 302
>gi|417822210|ref|ZP_12468812.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE48]
gi|340049823|gb|EGR10735.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE48]
Length = 315
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAAAHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|393760453|ref|ZP_10349263.1| methionyl-tRNA formyltransferase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161310|gb|EJC61374.1| methionyl-tRNA formyltransferase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 313
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M+V LP + ++ TL + L +L ++D ++ + D T L PQ G +YA +
Sbjct: 155 MLVRSELPIRDDHSAATLHDDLAQLGAQALLDALQHLR-DGT-LQAVPQPEAGVTYAEKL 212
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
K E+VLD S AK + R+I AF+P PG+ +S ++ +K+W+A + +PG
Sbjct: 213 SKAESVLDLSRPAKELERRIRAFDPVPGST---LSLPGLEQPVKVWRAQVVEQTHCAEPG 269
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
ILNV+ GI V CG+ V++LLELQK K+ F+ G
Sbjct: 270 QILNVSAQ-GIDVACGEGVLRLLELQKAGSKRQPVAVFVQG 309
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT A L+ L I L++T+PD +GRGMKL+ SPVK+ ALK +I ++
Sbjct: 1 MRIVFAGTPDFARVALEALLAQGVEIPLVMTQPDRPAGRGMKLSPSPVKQAALKAAIPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+L+GKY + A + + L ++ D+M+V ILP
Sbjct: 61 QPHSLRLDGKYPEEAAQARQTLLDVQPDLMVVAAYGLILP 100
>gi|422908560|ref|ZP_16943251.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-09]
gi|341640170|gb|EGS64762.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-09]
Length = 315
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKALALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDRLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|253699292|ref|YP_003020481.1| methionyl-tRNA formyltransferase [Geobacter sp. M21]
gi|251774142|gb|ACT16723.1| methionyl-tRNA formyltransferase [Geobacter sp. M21]
Length = 318
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 72/308 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS---- 56
M+I+F GT A L TL +V ++T+PD GRG + PVK A +H
Sbjct: 4 MRIVFMGTPEFACPTLRTLIERGEKVVAVVTQPDRPKGRGQQTLPPPVKVVAEEHGIPVL 63
Query: 57 --IKIIQPISLK-------------------------------------LNGKYHKIA-- 75
+K+ P S++ L +Y A
Sbjct: 64 QPVKVRLPESIEEIRGLNPDLIVVIAFGQILPKALLDIPRYGCINVHASLLPRYRGAAPL 123
Query: 76 ------NETHKLLNKIEFDIMIVMGIL----------PEDTSLTLQNKLEKLSKILIIDT 119
ET + + D+ + G + EDT +L +++ +L L+ +T
Sbjct: 124 NWCIINGETETGVTTMMMDVGLDTGDMLLKRSTPIGADEDTQ-SLHDRMSQLGAELLAET 182
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ ++ +L + Q + YAP++KK + V+DWS A+ I ++ P+PGA ++
Sbjct: 183 LDRLAR--GELVPEKQDDALTCYAPMMKKEDGVIDWSRDAQAIKNQVRGMTPWPGAYSFL 240
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
K LK+++ S + PG IL++ +GI V CG + + ELQ KK++
Sbjct: 241 -----DDKLLKVFRVQTAS--GSGAPGEILSLG-RDGIEVACGTGSLVISELQLEGKKRL 292
Query: 240 SATEFING 247
A +F+ G
Sbjct: 293 PAGDFLAG 300
>gi|254225569|ref|ZP_04919178.1| methionyl-tRNA formyltransferase [Vibrio cholerae V51]
gi|125621889|gb|EAZ50214.1| methionyl-tRNA formyltransferase [Vibrio cholerae V51]
Length = 315
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAYKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|153212950|ref|ZP_01948544.1| methionyl-tRNA formyltransferase [Vibrio cholerae 1587]
gi|153826421|ref|ZP_01979088.1| methionyl-tRNA formyltransferase [Vibrio cholerae MZO-2]
gi|297581921|ref|ZP_06943841.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC385]
gi|124116176|gb|EAY34996.1| methionyl-tRNA formyltransferase [Vibrio cholerae 1587]
gi|149739807|gb|EDM54002.1| methionyl-tRNA formyltransferase [Vibrio cholerae MZO-2]
gi|297533788|gb|EFH72629.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC385]
Length = 315
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|419834986|ref|ZP_14358436.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-46B1]
gi|421341537|ref|ZP_15791948.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-43B1]
gi|423733325|ref|ZP_17706564.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-41B1]
gi|424007626|ref|ZP_17750588.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-44C1]
gi|395948165|gb|EJH58818.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-43B1]
gi|408632791|gb|EKL05226.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-41B1]
gi|408859714|gb|EKL99369.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-46B1]
gi|408868376|gb|EKM07712.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-44C1]
Length = 315
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|389573304|ref|ZP_10163379.1| methionyl-tRNA formyltransferase [Bacillus sp. M 2-6]
gi|388427001|gb|EIL84811.1| methionyl-tRNA formyltransferase [Bacillus sp. M 2-6]
Length = 317
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 69/308 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK ALKH I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLQTLITEGYEVVGVVTQPDRPKGRKRVLTPPPVKVEALKHGIPVLQ 62
Query: 62 PISLKLNGKYHKIAN--------------ETHKLLNKIEFDIMIV-MGILPE-------- 98
P ++L+ + K+ +LL++ EF + V +LPE
Sbjct: 63 PEKVRLDEEIDKVLALKPDLIVTAAFGQILPKRLLDEPEFGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL----------------FFK- 133
T +T+ +EKL D I K+E ++ +L K
Sbjct: 123 YAILQGKKKTGVTIMYMVEKLDA---GDMISKVEVEIDELDNVGTLHDKLSVAGAALLKD 179
Query: 134 -------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
PQ+ +YAP IK+ + LDW+ + + ++ NP+P A T +
Sbjct: 180 TVPNVLSRSISPIPQNEEAATYAPNIKREQERLDWTKPGEELYNQVRGLNPWPVAYTEW- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
S N LK+W+A + +++ ++PG ++ + ++ + + L +Q KKK+S
Sbjct: 239 SGAN----LKVWEAKKVPLQAPEEPGKVIELQKEGPVVGTGNQQGLLLTSVQPAGKKKMS 294
Query: 241 ATEFINGC 248
+F+ G
Sbjct: 295 GEDFLRGA 302
>gi|262191294|ref|ZP_06049488.1| methionyl-tRNA formyltransferase [Vibrio cholerae CT 5369-93]
gi|262032832|gb|EEY51376.1| methionyl-tRNA formyltransferase [Vibrio cholerae CT 5369-93]
Length = 315
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|167037731|ref|YP_001665309.1| methionyl-tRNA formyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|166856565|gb|ABY94973.1| methionyl-tRNA formyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
Length = 310
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 86/316 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+F GT A L L+ +++ ++T+PD GRGMK +FSPVK+ AL+ ++I+
Sbjct: 2 LKIVFMGTPEFAVPSLQKLFEEGYDVAAVVTQPDKQKGRGMKFSFSPVKEVALQKGVEIL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEF---DIMIVMG---ILPE---------------- 98
QP +K N ++ LN++E D ++V+ ILPE
Sbjct: 62 QPEKIKNNPEF----------LNRLEVINPDAIVVVAYGKILPEEILTLPKYGCINVHAS 111
Query: 99 --------------------DTSLT--LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +T L +K +LI +I +E D + S
Sbjct: 112 LLPKYRGAAPINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLS 171
Query: 137 NIGE-------------SYAPLIKKNEAV------------LDWSLSAKTIMRKINAFNP 171
+G S P+ ++ E +DW+ +A+ I I P
Sbjct: 172 RLGAEVLIETLKGLEKGSLTPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKP 231
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
+PG T+Y K LKIWK + ++ GT+L ++V C K+ +K++E+
Sbjct: 232 WPGCYTFY-----GDKMLKIWKGEIVEYNGNEENGTVLKSK--GDLIVKCDKDALKIVEI 284
Query: 232 QKNNKKKISATEFING 247
Q+ KK+ E++ G
Sbjct: 285 QQEGSKKMGIREYLIG 300
>gi|339481946|ref|YP_004693732.1| Methionyl-tRNA formyltransferase [Nitrosomonas sp. Is79A3]
gi|338804091|gb|AEJ00333.1| Methionyl-tRNA formyltransferase [Nitrosomonas sp. Is79A3]
Length = 319
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
+ I P+DT+ +L +KL L I++ + + +L Q YA IKK EA
Sbjct: 153 IAIAPDDTTQSLHDKLGLLGAQSIVEAL--VLLQQGRLVPIVQDETLACYAAKIKKTEAE 210
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
+DW SA+ I R + FNP PGA TY+ + LKIW+A ++ + KPG I++V+
Sbjct: 211 IDWQQSAEQIDRVVRTFNPNPGAYTYF-----RDLALKIWQAKVVAGRAAGKPGEIISVD 265
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI V CG N++++ +QK KK+S+ +F+ G
Sbjct: 266 -REGITVACGSNMLQVEIVQKPGGKKLSSADFLAG 299
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT I AA LD L ++H IVL+LT+PD +GRGMK S VK A + + ++
Sbjct: 1 MRIIFAGTPIFAATALDALLKADHEIVLVLTQPDRPAGRGMKTAASAVKLLAQQQDLALL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP++LK + E L + D+MIV ILPE
Sbjct: 61 QPLTLK--------SAEIQTQLLALSADVMIVAAYGLILPE 93
>gi|312797601|ref|YP_004030523.1| methionyl-tRNA formyltransferase [Burkholderia rhizoxinica HKI 454]
gi|312169376|emb|CBW76379.1| Methionyl-tRNA formyltransferase (EC 2.1.2.9) [Burkholderia
rhizoxinica HKI 454]
Length = 341
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 92 VMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEA 151
+ I P DT+ TL +KL LI+ ++++E L PQ + G +YA + K EA
Sbjct: 168 AVAIEPTDTTGTLHDKLAVTGARLIVAGLRELER-TGSLPVTPQPSEGITYAHKLSKQEA 226
Query: 152 VLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-KPGTILN 210
LDW L A + K+ AF+PFP A + LKIW A + T PGTIL
Sbjct: 227 ALDWRLPADVLACKVRAFDPFPAAHGIL-----EGTPLKIWAAEPVRAGGTGLTPGTILA 281
Query: 211 VNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
V+ G+ + CG++ + +LQK K+++A EF+ G
Sbjct: 282 VD-SAGVTIACGEHALLATQLQKPGGKRLAAREFVAG 317
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AA L ++++ + L+LT+PD +GRGMK + SPVK+ AL + +
Sbjct: 9 LRVIFAGTPPFAATALQAIHDAGFAVPLVLTQPDRAAGRGMKSSSSPVKQLALARELALA 68
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP SL+ +GKY A + LL+ D+M+V
Sbjct: 69 QPPSLRCDGKYPTEAADALALLHATPHDVMVV 100
>gi|153830119|ref|ZP_01982786.1| methionyl-tRNA formyltransferase [Vibrio cholerae 623-39]
gi|417818648|ref|ZP_12465270.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE39]
gi|423941756|ref|ZP_17732989.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-40]
gi|423973177|ref|ZP_17736534.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-46]
gi|148874383|gb|EDL72518.1| methionyl-tRNA formyltransferase [Vibrio cholerae 623-39]
gi|340044256|gb|EGR05209.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE39]
gi|408662693|gb|EKL33605.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-40]
gi|408666643|gb|EKL37422.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-46]
Length = 315
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDNETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|90419799|ref|ZP_01227708.1| methionyl-tRNA formyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335840|gb|EAS49588.1| methionyl-tRNA formyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 319
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 139/314 (44%), Gaps = 76/314 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR-GMKLNFS-----------PV 48
++++F GT + L L + H+IV + T+P +GR G+ L S PV
Sbjct: 3 LRVVFMGTPAFSVPTLAALAAAGHDIVAVYTQPPRKAGRRGLTLTPSPVQLEAERLGLPV 62
Query: 49 KK-------------YALKHSIKII-------------QPISLKLNG------KYHKIA- 75
+ AL + ++ P LNG ++ A
Sbjct: 63 RAPLNFKDAADREAFAALDCDVAVVVAYGLLLPQAVLDMPRRGCLNGHGSLLPRWRGAAP 122
Query: 76 ---------NETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKILIIDT 119
ET ++ ++E D V I DT+ L ++L ++ L+++
Sbjct: 123 IQRAIEAGDAETGMMVMRMEAGLDTGPVALTTETPIAATDTTADLHDRLAEICATLMVEA 182
Query: 120 IKKIEYDMTKLFFKPQSNIGES------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
+ K+E L F+ Q +I YA I K EA LD++ A I R+INAF+PFP
Sbjct: 183 LDKLEAG--TLAFEDQDSIAARTGRAPIYAAKIDKAEAALDFTGDASGIARRINAFSPFP 240
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
GA T +S+ + +K+ +A A + + PGT+L+ + +L+ CG +++LELQ+
Sbjct: 241 GAWT-MMSFGGAPERVKLLRAAAETGDGA--PGTLLD----DRLLIACGTGAVRILELQR 293
Query: 234 NNKKKISATEFING 247
+++SA E + G
Sbjct: 294 AGGRRMSAEELLKG 307
>gi|386758296|ref|YP_006231512.1| methionyl-tRNA formyltransferase [Bacillus sp. JS]
gi|384931578|gb|AFI28256.1| methionyl-tRNA formyltransferase [Bacillus sp. JS]
Length = 317
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLKTLIEDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ L+ F I + +LPE
Sbjct: 63 PEKVRLKEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAG---DMISKVEVDIEETDNVGTLHDKLSVAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + +I NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W + +T +PGT++ V GI+V G + LL ELQ KK++
Sbjct: 239 NGQN----LKVWASKKTPAPTTAEPGTVVAVE-KEGIIVATGNDTALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|229530169|ref|ZP_04419558.1| methionyl-tRNA formyltransferase [Vibrio cholerae 12129(1)]
gi|384423403|ref|YP_005632761.1| Methionyl-tRNA formyltransferase [Vibrio cholerae LMA3984-4]
gi|229332302|gb|EEN97789.1| methionyl-tRNA formyltransferase [Vibrio cholerae 12129(1)]
gi|327482956|gb|AEA77363.1| Methionyl-tRNA formyltransferase [Vibrio cholerae LMA3984-4]
Length = 315
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETHAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|344209025|ref|YP_004794166.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia JV3]
gi|343780387|gb|AEM52940.1| Methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia JV3]
Length = 307
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPV------------ 48
M+I+FAGT A + L H +V + T+PD +GRG L SPV
Sbjct: 1 MRIVFAGTPEFAVSSLRAAAR-HHEVVAVYTQPDRPAGRGRGLAPSPVKLDAVARGIPVY 59
Query: 49 -----KKYALKHSIKIIQP----------------ISLKLNGKYHKIAN----------- 76
K A + ++ +QP +++ +G ++ A+
Sbjct: 60 QPESLKDEAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAPI 119
Query: 77 ---------ETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKILIIDTI 120
+T L ++E D V+ I DT L +KL +L ++ D +
Sbjct: 120 QRAIQAGDAKTGVCLMQMEAGLDTGPVLLHQELPIAATDTGGQLHDKLAELGAQVLSDGL 179
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + K +PQ G +YA + K EA LDW+ A + R + AFNP+P A+
Sbjct: 180 GLLRAGI-KPIARPQPEQGVTYAHKLDKAEARLDWAQDADALARTVRAFNPWPIAEATLA 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ ++I A AL + + PGT+L + +GI + CG+ ++L LQ+ K I+
Sbjct: 239 G-----ERVRIHGAVALDLAHGQAPGTVLAAS-RDGIDIACGQGALRLRTLQREGGKAIT 292
Query: 241 ATEFIN 246
A +++N
Sbjct: 293 AADYLN 298
>gi|145590256|ref|YP_001156853.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|189044569|sp|A4T0M5.1|FMT_POLSQ RecName: Full=Methionyl-tRNA formyltransferase
gi|145048662|gb|ABP35289.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 332
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 87/151 (57%), Gaps = 8/151 (5%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
+ I ++TS +L ++L L LI+D + ++ D L PQ +G +YA I K EA
Sbjct: 168 LAIASDETSSSLHDRLAALGAGLIVDALSLLQ-DGKGLSRTPQPALGVTYAEKILKAEAD 226
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNV- 211
LDWSLSA+ I +I AFNPFPGA IS N + +K+WK+ ++ + G I V
Sbjct: 227 LDWSLSAREIDARIRAFNPFPGA----ISNLNAET-IKLWKSRLADEDAYSEAGPIGAVI 281
Query: 212 NF-HNGILVVCGKNVIKLLELQKNNKKKISA 241
F +G+ V CG VI++LE QK KK++A
Sbjct: 282 GFSEDGVFVRCGDGVIEILEAQKPGGKKMNA 312
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT AA + ++ + H IVL LT+PD +GRGM L SPVK++AL+ +I ++
Sbjct: 1 MKIVFAGTPEFAAQAMRAIHAAGHEIVLALTQPDRRAGRGMHLQASPVKEFALEKNIPVL 60
Query: 61 QPISLKLNGKY---HKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP +L+ N K + A + ++ L FD M+V+ ILP++
Sbjct: 61 QPETLRRNNKDPEKQQQAEDAYRALINTNFDAMVVVAYGLILPQE 105
>gi|401565860|ref|ZP_10806671.1| methionyl-tRNA formyltransferase [Selenomonas sp. FOBRC6]
gi|400183491|gb|EJO17744.1| methionyl-tRNA formyltransferase [Selenomonas sp. FOBRC6]
Length = 312
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 133/311 (42%), Gaps = 72/311 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58
M+++F GT A L + +V ++T+PD GRG KL+ SPVK +AL H I
Sbjct: 1 MRVVFMGTPDFAVPTLAAIAARSDLAEVVAVVTQPDRPRGRGKKLSPSPVKAWALAHDIP 60
Query: 59 IIQPISLK-----------------------------LNGKYHKIANETHKLLNK----- 84
++QP+ + L+ H N LL K
Sbjct: 61 VMQPVRARDADFVAQLRAIAPDLAVVVAFGQILSQEVLDVPVHGCINVHASLLPKLRGAA 120
Query: 85 -IEFDIMI---VMGI-------------------LP--EDTSL-TLQNKLEKLSKILIID 118
I+ IM V GI +P DT+ +L + L + L+++
Sbjct: 121 PIQHAIMAGERVTGITTMQMDAGLDTGDMLLCREVPINADTTYGSLHDALMETGASLLVE 180
Query: 119 TIKKIEYDMTKLFFKPQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
T++++ L PQ+ GES YA I + AV+DWS SA+ + + NP P A+T
Sbjct: 181 TLEQLAAG--TLVRTPQT--GESSYAARITRETAVIDWSKSARALDALVRGLNPTPYAQT 236
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
+ K+ + ++ + GTI+ N G++V G +++ E+Q KK
Sbjct: 237 AL-----EGDTYKVGALRSTGRAASAEVGTIIAANAKAGLVVAAGDEDVEITEIQAPGKK 291
Query: 238 KISATEFINGC 248
++A F+NGC
Sbjct: 292 MMAANAFLNGC 302
>gi|254291094|ref|ZP_04961891.1| methionyl-tRNA formyltransferase [Vibrio cholerae AM-19226]
gi|150422939|gb|EDN14889.1| methionyl-tRNA formyltransferase [Vibrio cholerae AM-19226]
Length = 315
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++A+ ++W+ A I R I AFNP+P
Sbjct: 177 PQALLECLEDIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|357237132|ref|ZP_09124475.1| methionyl-tRNA formyltransferase [Streptococcus criceti HS-6]
gi|356885114|gb|EHI75314.1| methionyl-tRNA formyltransferase [Streptococcus criceti HS-6]
Length = 313
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 141/312 (45%), Gaps = 68/312 (21%)
Query: 2 KIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
KI+F GT AA +L+ L S+ + I+ ++T+PD GR ++ +PVK+ AL +++ +
Sbjct: 3 KIVFMGTPAFAATVLEGLIASKAYEILAVVTQPDRAVGRKKEIRMTPVKEVALANNLAVY 62
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP ++L +G KY A
Sbjct: 63 QPEKLSGSQEMADLLALGADGIITAAYGQFLPSKLLDRMEFALNVHASLLPKYRGGAPIH 122
Query: 79 HKLLN--------------KIEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTIK 121
H L+N +++ M+ LP +D +L KL L + L+++ +
Sbjct: 123 HALINGDDKAGVTIMEMVKEMDAGDMVAQASLPILDKDNVGSLFEKLAVLGRDLLLEALP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+Y KL +PQ S++P I + LDWS SA+ + +I P+P A T
Sbjct: 183 --DYLAGKLQPQPQDPDQVSFSPNITPEQERLDWSKSARALFNQIRGMYPWPVAHTLL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F KI +A +L +E +PG I+ ++V G+ + L+E+Q K K++
Sbjct: 239 --NGQRF-KIHQAQSLELEGQGQPGQIIE-KTKKTLVVATGQGALSLIEVQPAGKPKMNI 294
Query: 242 TEFINGCIKNIK 253
T+F+NG + +K
Sbjct: 295 TDFLNGSGQKLK 306
>gi|238926273|ref|ZP_04658033.1| methionyl-tRNA formyltransferase [Selenomonas flueggei ATCC 43531]
gi|238885953|gb|EEQ49591.1| methionyl-tRNA formyltransferase [Selenomonas flueggei ATCC 43531]
Length = 315
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 74/312 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI- 57
M+ +F GT + IL + +I ++T+PD GRG KL+ SPVK +AL H I
Sbjct: 4 MRTVFMGTPDFSVGILAAMAERRDLMDIAAVVTQPDRPRGRGKKLSPSPVKAWALAHDIP 63
Query: 58 ----------------KIIQP----------------ISLKLNGK----------YHKIA 75
++++P + + ++G Y A
Sbjct: 64 VLQPARARDAAFAEELRVLRPDVAVVAAFGQILTQEILDIPVHGCINVHASLLPLYRGAA 123
Query: 76 NETHKLLNKI--------EFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIID 118
H +++ + + D + G I + T TL + L + L+++
Sbjct: 124 PIQHAVMDGVAVTGITTMQMDAGLDTGDMLLRREVPIHADTTYGTLHDALMETGAALLVE 183
Query: 119 TIKKIEYDMTKLFFKPQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
T++++ L PQ+ GES YA I + A +DWS +A+ + + NP P A+T
Sbjct: 184 TLEQLAAG--TLIRTPQT--GESTYAARITRETAQIDWSRTARELDALVRGLNPVPYAET 239
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKP-GTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
+ K L +L+ E T P GTIL + G+ V G ++++ E+Q K
Sbjct: 240 HLGDALYKIGML------SLTGERTDAPHGTILTADRRAGLRVAAGDEIVQVTEIQAPGK 293
Query: 237 KKISATEFINGC 248
+ ++A+EF+NGC
Sbjct: 294 RMMAASEFLNGC 305
>gi|46200885|ref|ZP_00056291.2| COG0223: Methionyl-tRNA formyltransferase [Magnetospirillum
magnetotacticum MS-1]
Length = 305
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 86/314 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + IL +L + H +V + ++P +GRG K +PV +A + I +
Sbjct: 1 MKLVFMGTPDFSVPILGSLIEAGHQVVCVYSQPPRPAGRGHKEQLTPVHAFAHERGIAVR 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
P SLK + E ++ DI +V ILP+
Sbjct: 61 TPKSLK--------SPEAQAEFAALDADIAVVAAYGLILPQAVLDAPRLGCLNVHASLLP 112
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF- 131
D L L + S +L DT +DM
Sbjct: 113 RWRGAAPIQRAILAGDAETGITIMQMDAGLDTGAMLARESIVLAPDTTAPWLHDMLAAMG 172
Query: 132 ------------------FKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
PQ G +YA + K E +LDW SA + RK+ A NP+P
Sbjct: 173 ARMMAEVLGRLADDEVVTATPQPAEGVTYAHKLAKEEGLLDWRQSAVELDRKVRALNPWP 232
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
G + ++ + +K+W+A L + +PGT+L+ + + V CGK ++ L++Q+
Sbjct: 233 G-----VWFEMAGERIKVWEAAVLP--GSGQPGTVLD----DQMTVACGKFALRPLKVQR 281
Query: 234 NNKKKISATEFING 247
K ++ E + G
Sbjct: 282 AGKGVMTTGEMLRG 295
>gi|331086045|ref|ZP_08335128.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406968|gb|EGG86473.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 321
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 135/325 (41%), Gaps = 92/325 (28%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT + L+TL + H +VL +T+PD GRG ++ F+PVK+ A++H I +
Sbjct: 1 MRVIFMGTPEFSVGTLETLVEAGHEVVLAVTQPDKPKGRGKEMQFTPVKEAAIRHQIPVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
QP+ ++ K E +L E D+++V+ ILP+
Sbjct: 61 QPVKVR-----EKACVE---VLKSYEADVIVVIAFGQILPKSILELTPYGCINVHASLLP 112
Query: 100 ---------------------TSLTLQNKLEK----LSKILIIDTIK-------KIEYDM 127
T++ + L+ L K +I+D + K+
Sbjct: 113 KYRGAAPIQWAVIDGEKVSGVTTMQMDEGLDTGDMILKKEVILDEKETGGSLHDKLAEAG 172
Query: 128 TKLFFKPQSNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
L + + E AP K+ E +DW A+ I R I NP+P
Sbjct: 173 AALCVETLKRLEEGTAPAEKQGETTTDYAKMLTKQMGEIDWKQPAEKIERLIRGLNPWPS 232
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKK------------PGTILNVNFHNGILVVCG 222
A TY+ +K +KIW A + ES +K PGTI V + V G
Sbjct: 233 AYTYW-----NQKVMKIWLADTEADESGEKEKMASEEAKHPEPGTITAVA-KDRFSVQTG 286
Query: 223 KNVIKLLELQKNNKKKISATEFING 247
+ ++ +LELQ KK++ A F+ G
Sbjct: 287 EGLLTVLELQIPGKKRMDAGAFLRG 311
>gi|238758792|ref|ZP_04619966.1| Methionyl-tRNA formyltransferase [Yersinia aldovae ATCC 35236]
gi|238703089|gb|EEP95632.1| Methionyl-tRNA formyltransferase [Yersinia aldovae ATCC 35236]
Length = 315
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 95/170 (55%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE GI PEDTS TL +KL +L ++ T++++ + + ++
Sbjct: 147 DTGDMLHKIE------CGIQPEDTSATLYDKLAQLGPQGLLITLQQLADGTAQPEVQDET 200
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P +Y++ ++ +K+W+A
Sbjct: 201 QV--TYAEKLSKEEARLDWSLSAAQLERCIRAFNPWP--VSYFVV---DEQPIKVWQAQV 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L+ PG I++ + H GI V V+ + +LQ KK +SA + +N
Sbjct: 254 LAAVENATPGIIIHADKH-GIQVATADGVLNITQLQPAGKKAMSAADLLN 302
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A +H+I +
Sbjct: 5 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHNIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L+ ++ DIM+V+ ILP
Sbjct: 65 QPKSLR--------PEENQYLVADLKADIMVVVAYGLILP 96
>gi|424657932|ref|ZP_18095206.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-16]
gi|408057360|gb|EKG92212.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-16]
Length = 315
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQVVTQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|348027487|ref|YP_004870173.1| methionyl-tRNA formyltransferase [Glaciecola nitratireducens
FR1064]
gi|347944830|gb|AEP28180.1| methionyl-tRNA formyltransferase [Glaciecola nitratireducens
FR1064]
Length = 313
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 132/316 (41%), Gaps = 88/316 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ I+FAGT AA L LY SEHN++ + T+PD +GRG KL S VK AL + I
Sbjct: 5 LNIVFAGTPDFAAKHLAALYASEHNVIGVYTQPDRPAGRGKKLMPSAVKTLALNNGTAIY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP SLK E + + DIMIV+ ILP+
Sbjct: 65 QPASLK--------NEEVQQQFAALNADIMIVVAYGLILPKAVLDAPKLGCLNVHGSLLP 116
Query: 99 ------------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT 128
DT L LEK I T + D++
Sbjct: 117 KWRGAAPIQRAIWAGDKFTGISIMQMDEGLDTGAVL---LEKSMAITGAATSATLYEDLS 173
Query: 129 KLFFKPQSNIG-----ESYAPLIK------------KNEAVLDWSLSAKTIMRKINAFNP 171
+L PQ+ I E+ +P I+ K EA +DWSL+A+ + R + AFNP
Sbjct: 174 EL--GPQALIETLENLENLSPSIQNDDEATYAHKLSKEEARIDWSLNAQQLARNVRAFNP 231
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
+P + + + + +K+W+ + GTI+NV+ NGI V ++ + L +
Sbjct: 232 WP-----VVWFTHNDESIKVWQVEVVEAFDVLPEGTIVNVD-KNGIEVATSEHNLLLSNI 285
Query: 232 QKNNKKKISATEFING 247
Q KK S + ING
Sbjct: 286 QIPGKKAQSVADIING 301
>gi|257457588|ref|ZP_05622755.1| methionyl-tRNA formyltransferase [Treponema vincentii ATCC 35580]
gi|257444974|gb|EEV20050.1| methionyl-tRNA formyltransferase [Treponema vincentii ATCC 35580]
Length = 325
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
+ P DT+ TL + +L LI+ +K +E D PQ++ SY LI+K+ +L
Sbjct: 161 VGPSDTTETLLTRCAELGASLIVQALKMVETDSVNAV--PQNHEAASYCTLIQKDSGLLC 218
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA----LSIESTKKPGTILN 210
W A I RKI A+ P+PGA TY++ + L I +AH + ES + PG +L
Sbjct: 219 WQDDAGAIDRKIRAYTPWPGAFTYWMGSK-----LSIIQAHPYTGNAAAESPETPGLVLG 273
Query: 211 VNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
++ G+LV GK ++ + LQK KK + +F+NG
Sbjct: 274 IDKREGVLVQTGKGILAVQVLQKETKKAMQWKDFLNG 310
>gi|167040392|ref|YP_001663377.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X514]
gi|256752270|ref|ZP_05493133.1| methionyl-tRNA formyltransferase [Thermoanaerobacter ethanolicus
CCSD1]
gi|166854632|gb|ABY93041.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X514]
gi|256748838|gb|EEU61879.1| methionyl-tRNA formyltransferase [Thermoanaerobacter ethanolicus
CCSD1]
Length = 310
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 86/316 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+F GT A L L+ +++ ++T+PD GRGMK +FSPVK+ AL+ ++I+
Sbjct: 2 LKIVFMGTPEFAVPSLQKLFEEGYDVAAVVTQPDKQKGRGMKFSFSPVKEVALQKGVEIL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEF---DIMIVMG---ILPE---------------- 98
QP +K N ++ LN++E D ++V+ ILPE
Sbjct: 62 QPEKIKNNPEF----------LNRLEEINPDAIVVVAYGKILPEEILTLPKYGCINVHAS 111
Query: 99 --------------------DTSLT--LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +T L +K +LI +I +E D + S
Sbjct: 112 LLPKYRGAAPINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLS 171
Query: 137 NIGE-------------SYAPLIKKNEAV------------LDWSLSAKTIMRKINAFNP 171
+G S P+ ++ E +DW+ +A+ I I P
Sbjct: 172 RLGAEVLIETLKGLEKGSLTPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKP 231
Query: 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
+PG T+Y K LKIWK + ++ GT+L ++V C K+ +K++E+
Sbjct: 232 WPGCYTFY-----GDKMLKIWKGEIVEYNGNEENGTVLKSK--GDLIVKCDKDALKIVEI 284
Query: 232 QKNNKKKISATEFING 247
Q+ KK+ E++ G
Sbjct: 285 QQEGSKKMGIREYLIG 300
>gi|330813515|ref|YP_004357754.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486610|gb|AEA81015.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 304
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 67/293 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++F GT A L + SE +IV + ++P S RGMK+ SPV ++A +++ I
Sbjct: 3 LKVVFMGTPQFAVPALKKICESEIDIVAVYSQPPRKSNRGMKIEKSPVHEFADNNNLNIR 62
Query: 61 QPISLKLNGKY---------------------------HKIANETHKLLNKIEFDIMIVM 93
P L + +Y H N +L K I
Sbjct: 63 TPSKLDNDWEYFKSLTFDLAIVVAYGQIILKNFLEIPEHGFLNIHASILPKWRGAAPIQR 122
Query: 94 GILPEDT--SLTLQNKLEKLSKILII----------DTIKKIEYDMTKL----------- 130
I+ +DT +++ E+L ++ T ++E +++++
Sbjct: 123 SIMEQDTFTGISIMQIEEQLDAGPVLIKQEIELNENSTTGQVEQNLSEIGADKILEAIHL 182
Query: 131 ------FFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
+ PQ + +YA IKK + +DWS AK I+ +IN NP PGA Y Y+
Sbjct: 183 VEKKEAVYIPQDDNAATYAKKIKKEDETIDWSRDAKAIIAQINGLNPRPGA---YFEYRG 239
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
+K +KIWKA S E +PGT++N N + CGK I + E+Q+ KK
Sbjct: 240 EK--IKIWKASYGSGEG--EPGTVMNDNLQ----IACGKGSISVKEIQRPGKK 284
>gi|311109267|ref|YP_003982120.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans A8]
gi|310763956|gb|ADP19405.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans A8]
Length = 313
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A D L + H I L++T+PD +GRG+KL SPVK+ AL+ I++
Sbjct: 1 MRLVFAGTPEFARIAFDALRAAGHEIPLVMTQPDRPAGRGLKLTPSPVKQAALEAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y + A+E LL ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPEEASEAQALLQRVAPDVMVVAAYGLILPQ 101
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 135 QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKA 194
Q G +YA + K E LD + A + R++ AFNP PGA I +K+W+A
Sbjct: 201 QPEAGVTYAAKLDKAEGALDCTQPAGLLARRVRAFNPVPGAS---IRLPGLADPVKVWRA 257
Query: 195 HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
AL +T PG++L V+ GI + G V++LLELQK K+ F G
Sbjct: 258 QALDEATTAAPGSVLRVD-TTGIDIATGSGVLRLLELQKAGGKRQPVDVFARG 309
>gi|15640077|ref|NP_229704.1| methionyl-tRNA formyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121587248|ref|ZP_01677021.1| methionyl-tRNA formyltransferase [Vibrio cholerae 2740-80]
gi|121727877|ref|ZP_01680936.1| methionyl-tRNA formyltransferase [Vibrio cholerae V52]
gi|147673280|ref|YP_001218367.1| methionyl-tRNA formyltransferase [Vibrio cholerae O395]
gi|153817572|ref|ZP_01970239.1| methionyl-tRNA formyltransferase [Vibrio cholerae NCTC 8457]
gi|153821938|ref|ZP_01974605.1| methionyl-tRNA formyltransferase [Vibrio cholerae B33]
gi|227116502|ref|YP_002818398.1| methionyl-tRNA formyltransferase [Vibrio cholerae O395]
gi|229508330|ref|ZP_04397834.1| methionyl-tRNA formyltransferase [Vibrio cholerae BX 330286]
gi|229508831|ref|ZP_04398322.1| methionyl-tRNA formyltransferase [Vibrio cholerae B33]
gi|229517102|ref|ZP_04406548.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC9]
gi|229606605|ref|YP_002877253.1| methionyl-tRNA formyltransferase [Vibrio cholerae MJ-1236]
gi|254851610|ref|ZP_05240960.1| methionyl-tRNA formyltransferase [Vibrio cholerae MO10]
gi|255746773|ref|ZP_05420719.1| methionyl-tRNA formyltransferase [Vibrio cholera CIRS 101]
gi|262155854|ref|ZP_06028976.1| methionyl-tRNA formyltransferase [Vibrio cholerae INDRE 91/1]
gi|262166897|ref|ZP_06034618.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC27]
gi|360036731|ref|YP_004938494.1| methionyl-tRNA formyltransferase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379739950|ref|YP_005331919.1| methionyl-tRNA formyltransferase [Vibrio cholerae IEC224]
gi|417814881|ref|ZP_12461525.1| methionyl-tRNA formyltransferase [Vibrio cholerae HCUF01]
gi|418330757|ref|ZP_12941724.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-06A1]
gi|418339219|ref|ZP_12948111.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-23A1]
gi|418342289|ref|ZP_12949110.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-28A1]
gi|418347471|ref|ZP_12952213.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-43A1]
gi|419824520|ref|ZP_14348033.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1033(6)]
gi|421315291|ref|ZP_15765867.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1032(5)]
gi|421318847|ref|ZP_15769411.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1038(11)]
gi|421322900|ref|ZP_15773435.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1041(14)]
gi|421326352|ref|ZP_15776873.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1042(15)]
gi|421330277|ref|ZP_15780765.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1046(19)]
gi|421333970|ref|ZP_15784444.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1048(21)]
gi|421337785|ref|ZP_15788229.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-20A2]
gi|421345317|ref|ZP_15795707.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-46A1]
gi|422890073|ref|ZP_16932530.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-40A1]
gi|422900648|ref|ZP_16936279.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-48A1]
gi|422905041|ref|ZP_16939927.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-70A1]
gi|422911790|ref|ZP_16946338.1| methionyl-tRNA formyltransferase [Vibrio cholerae HFU-02]
gi|422924256|ref|ZP_16957324.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-38A1]
gi|423143321|ref|ZP_17130955.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-19A1]
gi|423148301|ref|ZP_17135678.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-21A1]
gi|423152090|ref|ZP_17139320.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-22A1]
gi|423154881|ref|ZP_17142032.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-32A1]
gi|423158746|ref|ZP_17145732.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-33A2]
gi|423163409|ref|ZP_17150224.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-48B2]
gi|423729412|ref|ZP_17702762.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-17A1]
gi|423744134|ref|ZP_17710940.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-50A2]
gi|423888035|ref|ZP_17724979.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-62A1]
gi|423920447|ref|ZP_17729592.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-77A1]
gi|424000592|ref|ZP_17743701.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-17A2]
gi|424004758|ref|ZP_17747761.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-37A1]
gi|424022554|ref|ZP_17762236.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-62B1]
gi|424025574|ref|ZP_17765209.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-69A1]
gi|424584945|ref|ZP_18024556.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1030(3)]
gi|424589319|ref|ZP_18028783.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1037(10)]
gi|424593572|ref|ZP_18032930.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1040(13)]
gi|424597500|ref|ZP_18036716.1| methionyl-tRNA formyltransferase [Vibrio Cholerae CP1044(17)]
gi|424600277|ref|ZP_18039450.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1047(20)]
gi|424605176|ref|ZP_18044162.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1050(23)]
gi|424608902|ref|ZP_18047779.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-39A1]
gi|424615698|ref|ZP_18054408.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-42A1]
gi|424643265|ref|ZP_18081040.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-56A2]
gi|424651196|ref|ZP_18088737.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-57A2]
gi|440712030|ref|ZP_20892656.1| methionyl-tRNA formyltransferase [Vibrio cholerae 4260B]
gi|443502102|ref|ZP_21069111.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-64A1]
gi|443506002|ref|ZP_21072818.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-65A1]
gi|443509839|ref|ZP_21076530.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-67A1]
gi|443513679|ref|ZP_21080241.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-68A1]
gi|443517487|ref|ZP_21083930.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-71A1]
gi|443522074|ref|ZP_21088341.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-72A2]
gi|443533746|ref|ZP_21099686.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-80A1]
gi|443536570|ref|ZP_21102430.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-81A1]
gi|449054721|ref|ZP_21733389.1| Methionyl-tRNA formyltransferase [Vibrio cholerae O1 str. Inaba
G4222]
gi|14548058|sp|Q9KVU4.1|FMT_VIBCH RecName: Full=Methionyl-tRNA formyltransferase
gi|172047502|sp|A5F4B4.1|FMT_VIBC3 RecName: Full=Methionyl-tRNA formyltransferase
gi|9654438|gb|AAF93223.1| methionyl-tRNA formyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548494|gb|EAX58550.1| methionyl-tRNA formyltransferase [Vibrio cholerae 2740-80]
gi|121629821|gb|EAX62236.1| methionyl-tRNA formyltransferase [Vibrio cholerae V52]
gi|126511840|gb|EAZ74434.1| methionyl-tRNA formyltransferase [Vibrio cholerae NCTC 8457]
gi|126520558|gb|EAZ77781.1| methionyl-tRNA formyltransferase [Vibrio cholerae B33]
gi|146315163|gb|ABQ19702.1| methionyl-tRNA formyltransferase [Vibrio cholerae O395]
gi|227011952|gb|ACP08162.1| methionyl-tRNA formyltransferase [Vibrio cholerae O395]
gi|229346165|gb|EEO11137.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC9]
gi|229354106|gb|EEO19038.1| methionyl-tRNA formyltransferase [Vibrio cholerae B33]
gi|229354603|gb|EEO19525.1| methionyl-tRNA formyltransferase [Vibrio cholerae BX 330286]
gi|229369260|gb|ACQ59683.1| methionyl-tRNA formyltransferase [Vibrio cholerae MJ-1236]
gi|254847315|gb|EET25729.1| methionyl-tRNA formyltransferase [Vibrio cholerae MO10]
gi|255735530|gb|EET90929.1| methionyl-tRNA formyltransferase [Vibrio cholera CIRS 101]
gi|262024668|gb|EEY43348.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC27]
gi|262030306|gb|EEY48948.1| methionyl-tRNA formyltransferase [Vibrio cholerae INDRE 91/1]
gi|340046053|gb|EGR06988.1| methionyl-tRNA formyltransferase [Vibrio cholerae HCUF01]
gi|341627249|gb|EGS52573.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-70A1]
gi|341628588|gb|EGS53816.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-48A1]
gi|341628790|gb|EGS53984.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-40A1]
gi|341642064|gb|EGS66552.1| methionyl-tRNA formyltransferase [Vibrio cholerae HFU-02]
gi|341649321|gb|EGS73300.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-38A1]
gi|356423391|gb|EHH76843.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-06A1]
gi|356424046|gb|EHH77468.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-21A1]
gi|356428087|gb|EHH81317.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-19A1]
gi|356428772|gb|EHH81993.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-23A1]
gi|356436239|gb|EHH89359.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-22A1]
gi|356439188|gb|EHH92177.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-28A1]
gi|356446910|gb|EHH99701.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-32A1]
gi|356448903|gb|EHI01664.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-43A1]
gi|356451473|gb|EHI04158.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-33A2]
gi|356456923|gb|EHI09500.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-48B2]
gi|356647885|gb|AET27940.1| methionyl-tRNA formyltransferase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378793460|gb|AFC56931.1| methionyl-tRNA formyltransferase [Vibrio cholerae IEC224]
gi|395924255|gb|EJH35061.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1032(5)]
gi|395925484|gb|EJH36282.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1041(14)]
gi|395926600|gb|EJH37378.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1038(11)]
gi|395936076|gb|EJH46806.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1042(15)]
gi|395936452|gb|EJH47176.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1046(19)]
gi|395938333|gb|EJH49027.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1048(21)]
gi|395948323|gb|EJH58974.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-20A2]
gi|395948927|gb|EJH59562.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-46A1]
gi|395965513|gb|EJH75682.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-56A2]
gi|395965662|gb|EJH75825.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-57A2]
gi|395967969|gb|EJH77993.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-42A1]
gi|395979827|gb|EJH89152.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1030(3)]
gi|395980231|gb|EJH89520.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1047(20)]
gi|408011528|gb|EKG49338.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-39A1]
gi|408038020|gb|EKG74380.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1037(10)]
gi|408038952|gb|EKG75265.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1040(13)]
gi|408046144|gb|EKG81860.1| methionyl-tRNA formyltransferase [Vibrio Cholerae CP1044(17)]
gi|408047915|gb|EKG83412.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1050(23)]
gi|408613050|gb|EKK86381.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1033(6)]
gi|408629222|gb|EKL01931.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-17A1]
gi|408645440|gb|EKL17092.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-50A2]
gi|408661014|gb|EKL32010.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-77A1]
gi|408661696|gb|EKL32679.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-62A1]
gi|408850350|gb|EKL90315.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-37A1]
gi|408850959|gb|EKL90900.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-17A2]
gi|408876617|gb|EKM15730.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-62B1]
gi|408882471|gb|EKM21290.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-69A1]
gi|439972275|gb|ELP48570.1| methionyl-tRNA formyltransferase [Vibrio cholerae 4260B]
gi|443433585|gb|ELS76086.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-64A1]
gi|443437415|gb|ELS83506.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-65A1]
gi|443441254|gb|ELS90916.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-67A1]
gi|443445070|gb|ELS98321.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-68A1]
gi|443448904|gb|ELT05513.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-71A1]
gi|443451967|gb|ELT12204.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-72A2]
gi|443463094|gb|ELT34105.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-80A1]
gi|443467817|gb|ELT42471.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-81A1]
gi|448265867|gb|EMB03100.1| Methionyl-tRNA formyltransferase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 315
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 139/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+P+ +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|194014601|ref|ZP_03053218.1| methionyl-tRNA formyltransferase [Bacillus pumilus ATCC 7061]
gi|194013627|gb|EDW23192.1| methionyl-tRNA formyltransferase [Bacillus pumilus ATCC 7061]
Length = 317
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 69/308 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK ALKH I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLQTLITEGYEVVGVVTQPDRPKGRKRVLTPPPVKVEALKHGITVLQ 62
Query: 62 PISLKLNGKYHKIANE--------------THKLLNKIEFDIMIV-MGILPE-------- 98
P ++L+ + K+ +LL++ +F + V +LPE
Sbjct: 63 PEKVRLDEEIDKVLALKPDLIVTAAFGQILPKRLLDEPQFGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL----------------FFK- 133
T +T+ +E+L D I K+E ++ +L K
Sbjct: 123 YAILQGKKKTGVTIMYMVERLDAG---DMISKVEVEIDELDNVGTLHDKLSVAGAALLKD 179
Query: 134 -------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
PQ+ +YAP IK+ + +DW+ + + + ++ NP+P A T +
Sbjct: 180 TVPNVLNGSISPIPQNEEAATYAPNIKREQERIDWAKTGEELYNQVRGLNPWPVAYTEW- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
LK+W+A + +E+ ++PG ++ + ++ K + L +Q KKK+S
Sbjct: 239 ----NGAHLKVWEAKKVPLEAQEEPGKVIELQKEGPVIGTGNKQGLLLTGVQPAGKKKMS 294
Query: 241 ATEFINGC 248
+F+ G
Sbjct: 295 GEDFLRGA 302
>gi|351731703|ref|ZP_08949394.1| methionyl-tRNA formyltransferase [Acidovorax radicis N35]
Length = 355
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 10/161 (6%)
Query: 89 IMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKK 148
+M + I P DT+ L ++L L +I++ ++ K PQ G +YA I+K
Sbjct: 183 LMERLAIAPTDTTAALHDQLALLGGRMIVEALELAACGGLKAV--PQPTEGITYAHKIEK 240
Query: 149 NEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIES--TKKPG 206
E+ +DWSL A+ I ++I AF+PFPGA T + + +KIW S +S K+ G
Sbjct: 241 AESTIDWSLPARVIGQRIRAFDPFPGAST-----ECAGETIKIWNYEIDSNKSNTDKRYG 295
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
IL+V+ G++V CG+ ++L LQ+ K+++A +F+ G
Sbjct: 296 QILSVD-SEGVVVACGEGALRLTTLQRAGGKRLAAADFLRG 335
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MRVIFAGTPEFARVALERLLAAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALEHGIPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY A L ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGKYPDDATAARDALRSVQADVMVVAAYGLILPQ 101
>gi|339443662|ref|YP_004709667.1| methionyl-tRNA formyltransferase [Clostridium sp. SY8519]
gi|338903063|dbj|BAK48565.1| methionyl-tRNA formyltransferase [Clostridium sp. SY8519]
Length = 312
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 129/309 (41%), Gaps = 70/309 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI--- 57
M +IF GT A L+ L H I L +T+PD GRG + + PVKK AL H I
Sbjct: 1 MNVIFMGTPDFAVPCLEYLIAEGHQITLAVTQPDKPKGRGRHMQYPPVKKAALVHGIPVF 60
Query: 58 ---KIIQPISL-------------------------------------KLNGKYHKIANE 77
+I P S+ L KY A
Sbjct: 61 QPKRIRDPESIASLKQYPADVIVVVAFGQILPEEVLQYPKYGCVNVHGSLLPKYRGAAPI 120
Query: 78 THKLLNK--------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
++N ++ D+ + G + P++T +L +KL + L +T+
Sbjct: 121 QWAVINGDPVSGVTTMQMDVGLDTGDILLKQEVPLAPDETGGSLFDKLSQTGARLCAETL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ PQ ++ LI+K++ +D+S A+++ I NP+P A T
Sbjct: 181 TALAAGTVTPV--PQDESLATHTSLIRKSDGAIDFSAPARSVECLIRGMNPWPSAYT--- 235
Query: 181 SYQNKKKFLKIWKAHALSIESTKK--PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ K LKIWKA +S E K+ PGT+ V N LV G++ +++LE+Q KK+
Sbjct: 236 --RCHGKTLKIWKAAVVSGEPEKEVPPGTVTEVR-KNSFLVSTGQDRLEVLEVQLEGKKR 292
Query: 239 ISATEFING 247
+ A F+ G
Sbjct: 293 MDAGAFLRG 301
>gi|227080282|ref|YP_002808833.1| methionyl-tRNA formyltransferase [Vibrio cholerae M66-2]
gi|298501228|ref|ZP_07011027.1| methionyl-tRNA formyltransferase [Vibrio cholerae MAK 757]
gi|254789379|sp|C3LPB8.1|FMT_VIBCM RecName: Full=Methionyl-tRNA formyltransferase
gi|227008170|gb|ACP04382.1| methionyl-tRNA formyltransferase [Vibrio cholerae M66-2]
gi|297540100|gb|EFH76162.1| methionyl-tRNA formyltransferase [Vibrio cholerae MAK 757]
Length = 315
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
PQ+ I + A +K+++A+ ++W+ A I R I AFNP+P
Sbjct: 177 PQALLECLQEIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|449146181|ref|ZP_21776973.1| methionyl-tRNA formyltransferase [Vibrio mimicus CAIM 602]
gi|449078173|gb|EMB49115.1| methionyl-tRNA formyltransferase [Vibrio mimicus CAIM 602]
Length = 315
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K + E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SEESKQQLVALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKITTLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A IK+++A+ ++W+ A I R I AFNP+P
Sbjct: 177 PQALLECLEDIAQGTAVAIKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|422348843|ref|ZP_16429735.1| methionyl-tRNA formyltransferase [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658895|gb|EKB31757.1| methionyl-tRNA formyltransferase [Sutterella wadsworthensis
2_1_59BFAA]
Length = 318
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDTS TL +L +L L++++++ + +L + PQ G +YA + K EAV+DW+L
Sbjct: 172 EDTSDTLMMRLAELGAELLVESLRTPD----ELDWTPQPEEGVTYAEKLLKTEAVIDWTL 227
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
AK + K+ AFNPFPG + +KIW+A AL E + PG +L+ NG+
Sbjct: 228 PAKVLANKVRAFNPFPGT-----VFDKDGVPVKIWQAEAL--ELSGHPGEVLDTT--NGL 278
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
++ CG+ ++ LQK K K++ F+
Sbjct: 279 VIACGEGALRATVLQKPGKPKMAFGPFLQ 307
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AA L L ++ H I L+L++PD SGRGMKL SPVKK AL+H I +I
Sbjct: 1 MKIIFAGTPDFAAVALKHLIDAGHEIALVLSQPDRPSGRGMKLTPSPVKKLALEHGIPVI 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
P++L L K + + H L + D+++V ILP+
Sbjct: 61 TPVTLSLK-KAPEESARIHADLKAVGADLLVVAAYGLILPQ 100
>gi|39995241|ref|NP_951192.1| methionyl-tRNA formyltransferase [Geobacter sulfurreducens PCA]
gi|409910688|ref|YP_006889153.1| methionyl-tRNA formyltransferase [Geobacter sulfurreducens KN400]
gi|73919395|sp|Q74GW4.1|FMT_GEOSL RecName: Full=Methionyl-tRNA formyltransferase
gi|39982003|gb|AAR33465.1| methionyl-tRNA formyltransferase [Geobacter sulfurreducens PCA]
gi|298504246|gb|ADI82969.1| methionyl-tRNA formyltransferase [Geobacter sulfurreducens KN400]
Length = 317
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI- 59
++IIF GT A L L ++ ++T+PD GRG KL PVK A +H I +
Sbjct: 4 LRIIFMGTPEFACPTLRKLIERGEEVIAVVTQPDRPKGRGQKLVPPPVKALAQEHDIPVL 63
Query: 60 -----------------------------IQPISL-------------KLNGKYHKIA-- 75
I P SL L +Y A
Sbjct: 64 QPLKVRTPESVDEIRRLAPDLIVVVAFGQILPQSLLDIPKHGCINIHASLLPRYRGAAPL 123
Query: 76 ------NETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
ET + + D + G I P++ + +L ++L +L I +T+
Sbjct: 124 NWCLINGETETGITTMMMDAGLDTGDMLVKRAIPIGPDEDAQSLHDRLSQLGAETIDETL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ KL + Q + YAP++KK + ++DW+ + ++ F P+PGA T+
Sbjct: 184 DLLLA--GKLVREKQDDSLTCYAPMLKKEDGLVDWTREPVQVKNQVRGFTPWPGAYTFL- 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K LK+++ A++ E T +PG IL V GILV CG I + ELQ +K++
Sbjct: 241 ----DGKTLKLYRV-AVAGE-TGEPGEILRVG-REGILVGCGSGSILIQELQLEGRKRLP 293
Query: 241 ATEFING 247
EF+ G
Sbjct: 294 TAEFLAG 300
>gi|419827749|ref|ZP_14351244.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-1A2]
gi|419831372|ref|ZP_14354847.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-61A2]
gi|422915776|ref|ZP_16950141.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-02A1]
gi|423810684|ref|ZP_17714730.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-55C2]
gi|423844922|ref|ZP_17718468.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-59A1]
gi|423876954|ref|ZP_17722135.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-60A1]
gi|423994709|ref|ZP_17739473.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-02C1]
gi|424011991|ref|ZP_17754756.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-55B2]
gi|424018003|ref|ZP_17757821.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-59B1]
gi|424623384|ref|ZP_18061876.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-50A1]
gi|424627954|ref|ZP_18066281.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-51A1]
gi|424631902|ref|ZP_18070040.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-52A1]
gi|424638815|ref|ZP_18076727.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-56A1]
gi|424647069|ref|ZP_18084763.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-57A1]
gi|443525941|ref|ZP_21092048.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-78A1]
gi|341642137|gb|EGS66624.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-02A1]
gi|408017703|gb|EKG55189.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-50A1]
gi|408023436|gb|EKG60600.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-52A1]
gi|408028528|gb|EKG65418.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-56A1]
gi|408038783|gb|EKG75110.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-57A1]
gi|408060042|gb|EKG94759.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-51A1]
gi|408624760|gb|EKK97698.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-1A2]
gi|408637514|gb|EKL09562.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-55C2]
gi|408645397|gb|EKL17052.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-60A1]
gi|408646496|gb|EKL18096.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-59A1]
gi|408652869|gb|EKL24060.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-61A2]
gi|408855787|gb|EKL95483.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-02C1]
gi|408863185|gb|EKM02677.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-55B2]
gi|408871814|gb|EKM11042.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-59B1]
gi|443455749|gb|ELT19509.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-78A1]
Length = 315
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ + L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVTQAPGTIVQAD-KSGIYVATGQGALVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|190576006|ref|YP_001973851.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
K279a]
gi|229487567|sp|B2FIR3.1|FMT_STRMK RecName: Full=Methionyl-tRNA formyltransferase
gi|190013928|emb|CAQ47568.1| putative methionyl-tRNA formyltransferase [Stenotrophomonas
maltophilia K279a]
Length = 307
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPV------------ 48
M+I+FAGT A + L H +V + T+PD +GRG L SPV
Sbjct: 1 MRIVFAGTPEFAVSSLRAAAR-HHEVVAVYTQPDRPAGRGRGLAPSPVKLEAVARGIPVY 59
Query: 49 -----KKYALKHSIKIIQP----------------ISLKLNGKYHKIAN----------- 76
K A + ++ +QP +++ +G ++ A+
Sbjct: 60 QPESLKDAAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAPI 119
Query: 77 ---------ETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKILIIDTI 120
+T L ++E D V+ I DT L +KL +L ++ D +
Sbjct: 120 QRAIQAGDAKTGVCLMQMEAGLDTGPVLLHQELPIASTDTGGQLHDKLAELGAQVLSDGL 179
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + K +PQ G +YA + K EA LDW+ A + R + AFNP+P A+
Sbjct: 180 GLLRAGI-KPIARPQPEQGVTYAHKLDKAEARLDWAQDADALARTVRAFNPWPIAEATLA 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ ++I A AL + + PGT+L +GI + CG+ ++L LQ+ K I+
Sbjct: 239 G-----ERVRIHGAVALEADHGQAPGTVLAAG-RDGIDIACGQGALRLRVLQREGGKAIT 292
Query: 241 ATEFIN 246
A +++N
Sbjct: 293 AADYLN 298
>gi|407941290|ref|YP_006856931.1| methionyl-tRNA formyltransferase [Acidovorax sp. KKS102]
gi|407899084|gb|AFU48293.1| methionyl-tRNA formyltransferase [Acidovorax sp. KKS102]
Length = 324
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ TL ++L L +I++ ++ L PQ G +YA I+K E+ +D
Sbjct: 163 IAPSDTTATLHDRLATLGGRMIVEALELAA--CGGLTAVPQPADGITYAHKIEKAESTID 220
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE--STKKPGTILNVN 212
W+L A I ++I AF+PFPGA T + K + +KIW SI+ S ++PG IL +
Sbjct: 221 WTLPAAVIGQRIRAFDPFPGAST-----ECKGETIKIWSYVIDSIQGISDQRPGQILAAD 275
Query: 213 FHNGILVVCGKN-VIKLLELQKNNKKKISATEFING 247
G+ V CG ++L LQ+ K+++A +F+ G
Sbjct: 276 -GAGVTVACGSGTALRLTTLQRAGGKRLAAADFLRG 310
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L+ L ++ + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MRVIFAGTPEFARVALERLLSAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALEHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY A + L + D+M+V ILPE
Sbjct: 61 QPRSLRLDGKYPDDAAAAREALLAAQADVMVVAAYGLILPE 101
>gi|418528333|ref|ZP_13094283.1| methionyl-tRNA formyltransferase [Comamonas testosteroni ATCC
11996]
gi|371454709|gb|EHN67711.1| methionyl-tRNA formyltransferase [Comamonas testosteroni ATCC
11996]
Length = 321
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M V+ LP DT+ +L +KL L LI++ ++ L PQ G +YA I
Sbjct: 155 MCVIERLPIAAHDTTASLHDKLATLGGRLIVEALEMAACG--GLSRTPQPADGVTYAHKI 212
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
+K E++++WS SA I R++ AFNPFPG T + +K+W+A A + + PG
Sbjct: 213 EKAESLINWSESADVIARRLRAFNPFPGGATSL-----GGEAIKVWEAEAQ--QGSGAPG 265
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+L+ + G+ V CG V+ + LQ+ K+++A +F+ G
Sbjct: 266 CVLSAD-ARGVRVACGSGVLNMTLLQRAGGKRLAAGDFLRG 305
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT A L++L + + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MKVIFAGTPEFARVALESLLAAGFEVPLVLTQPDRPAGRGMKLQASPVKQCALEHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L+GKY + A ++ + D+M+V ILP+
Sbjct: 61 QPLSLRLDGKYPEDAAAAKAAIDAAQADVMVVAAYGLILPQ 101
>gi|153802786|ref|ZP_01957372.1| methionyl-tRNA formyltransferase [Vibrio cholerae MZO-3]
gi|124121699|gb|EAY40442.1| methionyl-tRNA formyltransferase [Vibrio cholerae MZO-3]
Length = 315
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
PQ+ I + A +K+++A+ ++W+ A I R I AFNP+P
Sbjct: 177 PQALLECLQEIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|229520216|ref|ZP_04409643.1| methionyl-tRNA formyltransferase [Vibrio cholerae TM 11079-80]
gi|421352814|ref|ZP_15803154.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-45]
gi|422305455|ref|ZP_16392659.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1035(8)]
gi|229342810|gb|EEO07801.1| methionyl-tRNA formyltransferase [Vibrio cholerae TM 11079-80]
gi|395956962|gb|EJH67551.1| methionyl-tRNA formyltransferase [Vibrio cholerae HE-45]
gi|408628845|gb|EKL01563.1| methionyl-tRNA formyltransferase [Vibrio cholerae CP1035(8)]
Length = 315
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++WS +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + ++ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETQAVSQAPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|311068094|ref|YP_003973017.1| methionyl-tRNA formyltransferase [Bacillus atrophaeus 1942]
gi|310868611|gb|ADP32086.1| methionyl-tRNA formyltransferase [Bacillus atrophaeus 1942]
Length = 317
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 137/309 (44%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + + +V ++T+PD GR + PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIDEGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRHGITVLQ 62
Query: 62 PISLKLNGKYHKIAN--------------ETHKLLNKIEFD-IMIVMGILPE-------- 98
P ++ + + K+ KLL+ ++ I + +LPE
Sbjct: 63 PEKVRQDEEIEKVLALKPDLIVTAAFGQILPKKLLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D + KIE D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLD---AGDMLSKIEVDIEENDNVGTLHDKLSKAGAKLLSQ 179
Query: 134 P------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
Q + G+ +YAP IK+ + ++DWS S + + ++ NP+P A T +
Sbjct: 180 TVPDVIKGNVTPIQQDEGKATYAPNIKREQELIDWSRSGEDLYNQVRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LKIW A + +PGT++ V NGI+V G L+ ELQ KK++
Sbjct: 239 NGQN----LKIWSAKKTPAQKKAEPGTVIAVE-ENGIVVATGNETALLVTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|424778154|ref|ZP_18205105.1| methionyl-tRNA formyltransferase [Alcaligenes sp. HPC1271]
gi|422886982|gb|EKU29393.1| methionyl-tRNA formyltransferase [Alcaligenes sp. HPC1271]
Length = 313
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 6/155 (3%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
+ I + ++ TL + L +L +++ ++++ D T L PQ G +YA + K E+V
Sbjct: 161 LAIRDDHSAATLHDDLAQLGAQALLEALQQVR-DGT-LQATPQPEEGVTYAEKLSKAESV 218
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
L+ AK + R+I AF+P PG+ +S ++ +K+W+A AL + + +PG +LNV+
Sbjct: 219 LELGQPAKELERRIRAFDPVPGST---LSLPGLEQPVKVWRAQALEQKHSAEPGQVLNVS 275
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI V CG+ V++LLELQK K+ F+ G
Sbjct: 276 AQ-GIDVACGEGVLRLLELQKAGSKRQPVAVFVQG 309
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT A L+ L ++ L++T+PD +GRGMKL+ SPVK+ A+ +I ++
Sbjct: 1 MRIVFAGTPDFARIALEALLAQGFDVPLVMTQPDRPAGRGMKLSPSPVKQAAVNANIPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+L+GKY + A + + L ++ D+M+V ILP
Sbjct: 61 QPHSLRLDGKYPEEAAQARQTLLDLQPDLMVVAAYGLILP 100
>gi|91205376|ref|YP_537731.1| methionyl-tRNA formyltransferase [Rickettsia bellii RML369-C]
gi|122990925|sp|Q1RJ22.1|FMT_RICBR RecName: Full=Methionyl-tRNA formyltransferase
gi|91068920|gb|ABE04642.1| Methionyl-tRNA formyltransferase [Rickettsia bellii RML369-C]
Length = 304
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 131/311 (42%), Gaps = 81/311 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIF GT A L L NS H +V T+P GRG+ SP+ + A + I +
Sbjct: 1 MKIIFMGTPEFAVPALTKLINSNHKVVAAFTQPPKAKGRGLSETKSPIHQLADEAQIPVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
P +L+ E L+N I+ DI++V+ I+P++
Sbjct: 61 TPTTLR--------NEEAANLINNIDADIIVVIAYGFIIPQNILDAKKYGCLNIHPSDLP 112
Query: 100 ---TSLTLQNKL---EKLSKILII---------DTIKKIEYDM----------------- 127
+ LQ + +K S + I+ D + K ++D+
Sbjct: 113 RHRGAAPLQRTIIEGDKTSSVCIMQMDAGLDTGDILMKEDFDLPKKITLQELHDKCANLG 172
Query: 128 -----------TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAK 176
K+ KPQSN G +Y + K E ++W SA +I K+ NP+PG
Sbjct: 173 AELLIKTLANIDKIVPKPQSNEGVTYTHKLTKEEGRVNWQDSAFSINCKVRGMNPWPGV- 231
Query: 177 TYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y Y +K +KI +A E PGTI+N N + CGK ++ + +LQ+ K
Sbjct: 232 --YFKYNDKT--IKILEAEYSDEEHNFTPGTIINKNLE----IACGKGILMIKKLQQEGK 283
Query: 237 KKISATEFING 247
K ++ EF+ G
Sbjct: 284 KVLNIEEFLRG 294
>gi|344198259|ref|YP_004782585.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrivorans
SS3]
gi|343773703|gb|AEM46259.1| Methionyl-tRNA formyltransferase [Acidithiobacillus ferrivorans
SS3]
Length = 313
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ +L ++L +L + + + + + +L PQ +YA +KK EA LDW L
Sbjct: 162 DDTAASLHDRLARLGSVALRRALDGLWAN--RLKPGPQDPALATYARKLKKEEARLDWQL 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A T+ R + AFNP P A T + + K L++W+ L++ + PGTI V +G+
Sbjct: 220 PAATLERLVRAFNPSPVAHTLF-----RDKGLRVWQTQVLAVRGDQAPGTISAVE-KDGV 273
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CG++ ++LL +Q K +S ++F G
Sbjct: 274 VVTCGEDQLQLLAVQPAGKGVLSGSDFARG 303
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+++FAGT A IL L +V ILT+PD +GRG L SPVK+ AL I + Q
Sbjct: 6 RMVFAGTPEFARIILAELLRGPEEVVGILTQPDRPAGRGRALQTSPVKQEALAAGIPVFQ 65
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
P S K E LL + D++IV+ ILP+
Sbjct: 66 PESCK--------TGEALDLLRSLAPDLLIVVAYGQILPQ 97
>gi|424670319|ref|ZP_18107344.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
Ab55555]
gi|401070777|gb|EJP79291.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
Ab55555]
Length = 307
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPV------------ 48
M+I+FAGT A + L H +V + T+PD +GRG L SPV
Sbjct: 1 MRIVFAGTPEFAVSSLRAAAR-HHEVVAVYTQPDRPAGRGRGLAPSPVKLEAVARGIPVY 59
Query: 49 -----KKYALKHSIKIIQP----------------ISLKLNGKYHKIAN----------- 76
K A + ++ +QP +++ +G ++ A+
Sbjct: 60 QPESLKDAAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAPI 119
Query: 77 ---------ETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKILIIDTI 120
+T L ++E D V+ I DT L +KL +L ++ D +
Sbjct: 120 QRAIQAGDAKTGVCLMQMEAGLDTGPVLLHQELPIAATDTGGQLHDKLAELGAQVLSDGL 179
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + K +PQ G +YA + K EA LDW+ A + R + AFNP+P A+
Sbjct: 180 GLLRAGI-KPIARPQPEQGVTYAHKLDKAEARLDWAQDADALARTVRAFNPWPIAEATLA 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ ++I A AL + PGT+L +GI + CG+ V++L LQ+ K ++
Sbjct: 239 GER-----VRIHGAVALEAGHGQAPGTVLAAG-RDGIDIACGQGVLRLRVLQREGGKAVT 292
Query: 241 ATEFIN 246
A +++N
Sbjct: 293 AADYLN 298
>gi|452992004|emb|CCQ96626.1| methionyl-tRNA formyltransferase [Clostridium ultunense Esp]
Length = 321
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 131/307 (42%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+F GT A A L +L + +V ++T+PD GR SPVK YA ++ +
Sbjct: 4 VRILFMGTPDYAVASLKSLVEEGYPVVGVVTQPDKPKGRKRIPTPSPVKVYAQSMNLPLF 63
Query: 61 QPISLK-------------------------------------------LNGKYHKIANE 77
QP L+ L KY A
Sbjct: 64 QPEKLRRAEEVERILSVKPTLIVTAAYGQILPKSLLDAPPFGAINLHASLLPKYRGGAPI 123
Query: 78 THKLLNKIEFDIMIVMGILPE-----------------DTSLTLQNKLEKLSKILIIDTI 120
+ LLN + + +M + PE DT L KL +L+ L++ T+
Sbjct: 124 HYALLNGEKETGVTLMRMTPELDAGDILAQERIPIGDRDTVGDLFGKLTELAARLLLKTL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+Y K+ PQ + +YAP IKK E LD+S AK + +I AFNP+PGA T
Sbjct: 184 P--DYLEGKITPIPQDHSQATYAPNIKKEEEWLDFSKPAKDLYNQIRAFNPWPGAYTKIF 241
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ +K+W + ++PGTIL++ GI V G+ ++ L E+Q K+K+
Sbjct: 242 GER-----IKVWWSEIGEGSFKEEPGTILHLG-DEGIQVATGEGILVLKEIQPAGKRKMD 295
Query: 241 ATEFING 247
A F+ G
Sbjct: 296 AASFLRG 302
>gi|321315339|ref|YP_004207626.1| methionyl-tRNA formyltransferase [Bacillus subtilis BSn5]
gi|320021613|gb|ADV96599.1| methionyl-tRNA formyltransferase [Bacillus subtilis BSn5]
Length = 317
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ L+ F I + +LPE
Sbjct: 63 PEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAG---DMISKVEVDIEETDNVGTLHDKLSVAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + +I NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W++ + +PGT++ V GI+V G + LL ELQ KK++
Sbjct: 239 NGQN----LKVWESKKTPASTKAEPGTVVAVE-KEGIIVATGNDTALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|443632758|ref|ZP_21116937.1| Fmt [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443347581|gb|ELS61639.1| Fmt [Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 317
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVLTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ L+ F I + +LPE
Sbjct: 63 PEKVRLKEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLD---AGDMISKVEVDIEETDNVGTLHDKLSVAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + ++DWS + + + ++ NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELIDWSRTGEELYNQVRGLNPWPVAYTT-L 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W + ++ +PGT+++V GI+V G + LL ELQ KK++
Sbjct: 239 NGQN----LKVWASKKTPAQTKAEPGTVVSVE-KEGIIVATGNDTALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|408821887|ref|ZP_11206777.1| methionyl-tRNA formyltransferase [Pseudomonas geniculata N1]
Length = 307
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPV------------ 48
M+I+FAGT A + L H +V + T+PD +GRG L SPV
Sbjct: 1 MRIVFAGTPEFAVSSLRAAAR-HHEVVAVYTQPDRPAGRGRGLAPSPVKLEAVARGIPVY 59
Query: 49 -----KKYALKHSIKIIQP----------------ISLKLNGKYHKIAN----------- 76
K A + ++ +QP +++ +G ++ A+
Sbjct: 60 QPESLKDAAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAPI 119
Query: 77 ---------ETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKILIIDTI 120
+T L ++E D V+ I DT L +KL +L ++ D +
Sbjct: 120 QRAIQAGDAKTGVCLMQMEAGLDTGPVLLHQELPIAATDTGGQLHDKLAELGAQVLSDGL 179
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + K +PQ G +YA + K EA LDW+ A + R + AFNP+P A+
Sbjct: 180 GLLRAGI-KPIARPQPEQGVTYAHKLDKAEAKLDWAQDAGALARTVRAFNPWPIAEATLA 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ ++I A AL + + PGT+L + +GI + CG+ ++L LQ+ K I+
Sbjct: 239 GER-----VRIHGAVALEADHGQAPGTVLAAS-RDGIDIACGQGALRLRVLQREGGKAIT 292
Query: 241 ATEFIN 246
A +++N
Sbjct: 293 AADYLN 298
>gi|422921291|ref|ZP_16954539.1| methionyl-tRNA formyltransferase [Vibrio cholerae BJG-01]
gi|341649365|gb|EGS73343.1| methionyl-tRNA formyltransferase [Vibrio cholerae BJG-01]
Length = 315
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H++ +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNE-------------AVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++ A ++W+ +A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWNDAATHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + T+ PGTI+ + +GI V G+ V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVTQTPGTIVQAD-KSGIYVATGQGVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|169831744|ref|YP_001717726.1| methionyl-tRNA formyltransferase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638588|gb|ACA60094.1| methionyl-tRNA formyltransferase [Candidatus Desulforudis
audaxviator MP104C]
Length = 359
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 7/153 (4%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+D + ++L +L +L++ T+ ++ +L +PQ +YAP +++ V+D
Sbjct: 161 IGPDDNFGVVHDRLAELGAVLLVRTLDRLT--AGELVPRPQDESRATYAPPLRREHEVID 218
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ +A+ I ++ +P+PGA T + LK+W+A +PG +L +
Sbjct: 219 WTRTAEEIKNQVRGLDPWPGAHTML-----NGRVLKVWRAEIAGDRDGGRPGQVLLADPV 273
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G++V G ++LLE+Q ++++ A +F+ G
Sbjct: 274 RGLVVSTGAGAVRLLEVQPAGRRRVRAEDFLRG 306
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
++F GT A L L SE ++ ++T+PD GRG KL PVK YALK ++I+QP
Sbjct: 9 LVFMGTPDFAVPSLRALVESEFRVLRVVTQPDRPRGRGNKLAPGPVKAYALKQGLEILQP 68
Query: 63 ISLK 66
++++
Sbjct: 69 MNIR 72
>gi|406974481|gb|EKD97563.1| hypothetical protein ACD_23C00861G0002, partial [uncultured
bacterium]
Length = 194
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
ILP DT+ +L ++L L L++ + + E+ + +P I +YA I K+EA +D
Sbjct: 38 ILPSDTTGSLHDRLAGLGGQLMVQVLGQAEHGTLQPVPQPLQGI--TYASKIDKSEAAID 95
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILN---V 211
WS SA+TI +++ AFNPFPGA T + LKIW A ++ G +
Sbjct: 96 WSQSAQTISQRVRAFNPFPGASTVL-----AGETLKIWAAEV--GDAVPMAGRVFGQIVA 148
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+GI V + + + ELQ+ K++S+ EF+ GC
Sbjct: 149 LAPSGIAVAALDSTLIITELQRPGGKRLSSAEFLRGC 185
>gi|145631965|ref|ZP_01787718.1| methionyl-tRNA formyltransferase [Haemophilus influenzae R3021]
gi|144982379|gb|EDJ89956.1| methionyl-tRNA formyltransferase [Haemophilus influenzae R3021]
Length = 318
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLES--GKFISEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDWSLSA + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 DSQSNYAEKLSKEEAQLDWSLSAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L + K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLPHQD-KPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNISVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQTELKALNVDVMVVVAYGLILP 95
>gi|456735001|gb|EMF59771.1| Methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
EPM1]
Length = 307
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPV------------ 48
M+I+FAGT A + L H +V + T+PD +GRG L SPV
Sbjct: 1 MRIVFAGTPEFAVSSLRAAAR-HHEVVAVYTQPDRPAGRGRGLAPSPVKLEAVARGIPVY 59
Query: 49 -----KKYALKHSIKIIQP----------------ISLKLNGKYHKIAN----------- 76
K A + ++ +QP +++ +G ++ A+
Sbjct: 60 QPESLKDAAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAPI 119
Query: 77 ---------ETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKILIIDTI 120
+T L ++E D V+ I DT L +KL +L ++ D +
Sbjct: 120 QRAIQAGDAKTGVCLMQMEAGLDTGPVLLHQELPIAATDTGGQLHDKLAELGAQVLSDGL 179
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + K +PQ G +YA ++K EA LDW+ A + R + AFNP+P A+
Sbjct: 180 GLLRAGI-KPIARPQPERGVTYAHKLEKAEARLDWAQDADALARTVRAFNPWPIAEATLA 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ ++I A AL + PGT+L +GI + CG+ ++L LQ+ K I+
Sbjct: 239 GER-----VRIHGAVALEAGHGQAPGTVLAAG-RDGIDIACGQGALRLRVLQREGGKAIT 292
Query: 241 ATEFIN 246
A +++N
Sbjct: 293 AADYLN 298
>gi|419823925|ref|ZP_14347458.1| methionyl-tRNA formyltransferase [Bacillus atrophaeus C89]
gi|388471962|gb|EIM08752.1| methionyl-tRNA formyltransferase [Bacillus atrophaeus C89]
Length = 317
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 137/309 (44%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + + +V ++T+PD GR + PVK+ AL+H I ++Q
Sbjct: 3 RIVFIGTPDFSVPVLRTLIDEGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRHGITVLQ 62
Query: 62 PISLKLNGKYHKIAN--------------ETHKLLNKIEFD-IMIVMGILPE-------- 98
P ++ + + K+ KLL+ ++ I + +LPE
Sbjct: 63 PEKVRQDEEIEKVLALKPDLIVTAAFGQILPKKLLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D + KIE D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLD---AGDMLSKIEVDIEENDNVGTLHDKLSKAGAKLLSQ 179
Query: 134 P------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
Q + G+ +YAP IK+ + ++DWS S + + ++ NP+P A T +
Sbjct: 180 TVPDVIKGNVTPIQQDEGKATYAPNIKREQELIDWSRSGEDLYNQVRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LKIW A + +PGT++ V NGI+V G L+ ELQ KK++
Sbjct: 239 NGQN----LKIWSAKKTPAQKKAEPGTVIAVE-ENGIVVATGNETALLVTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|423014485|ref|ZP_17005206.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans AXX-A]
gi|338782488|gb|EGP46861.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans AXX-A]
Length = 313
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A D L + H+I L++T+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARIAFDALRAAGHDIPLVMTQPDRPAGRGLKLTPSPVKQAALDAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y + A E LL +I D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPEEAAEARALLERIAPDVMVVAAYGLILPQ 101
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 134 PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWK 193
PQ G +YA + K EA LD S A+ + R++ AFNP PGA I +K+W+
Sbjct: 200 PQPEDGVTYAAKLDKAEAALDCSQPAELLARRVRAFNPVPGAS---IRLPGLADPVKVWR 256
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A AL + PG++L + GI + G+ V++LLELQK K+ F+ G
Sbjct: 257 AQALPQPAAAAPGSVLRADAE-GIDIATGEGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|421765882|ref|ZP_16202662.1| Methionyl-tRNA formyltransferase [Lactococcus garvieae DCC43]
gi|407625652|gb|EKF52347.1| Methionyl-tRNA formyltransferase [Lactococcus garvieae DCC43]
Length = 320
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 70/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
KIIF GT + +L L +S E++I+ ++T+PD GR +L +PVK+ AL+ +KI+
Sbjct: 8 KIIFMGTPQFSQTVLKGLISSQEYDILAVVTQPDRKVGRKQELRMTPVKELALESGLKIL 67
Query: 61 QPISLKLNGKYHKIAN----------------ETHKLLNKIEFDIMIVMGILP------- 97
QP L + + ++ N KLL+ + F + + +LP
Sbjct: 68 QPEKLSGSPEMEELINFGAQGAGIVTAAFGQFLPGKLLDAMAFAVNVHASLLPKYRGGAP 127
Query: 98 --------------------------------------EDTSLTLQNKLEKLSKILIIDT 119
ED T+ KL + + L+++T
Sbjct: 128 IHYAIMNGEKEAGVTIMKMVRKMDAGDMVAKDSIPILEEDNVGTMFEKLAVVGRDLLLET 187
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ K Y ++ + Q +++P I E +DW+ + + I +I NPFP A T +
Sbjct: 188 LPK--YVAGEIQPQAQDESQATFSPNISPEEERIDWNKTNRQIFNQIRGMNPFPVAHTLW 245
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
N+ +F KI+ + + E + +PG I++ +LV G ++LLE+Q K K+
Sbjct: 246 ----NEGRF-KIYASRPVETEKSGQPGQIID-KTKKSLLVATGSGALELLEVQPAGKPKM 299
Query: 240 SATEFINGCIKNI 252
F+NG + +
Sbjct: 300 DIVSFLNGLGQKV 312
>gi|262172811|ref|ZP_06040489.1| methionyl-tRNA formyltransferase [Vibrio mimicus MB-451]
gi|261893887|gb|EEY39873.1| methionyl-tRNA formyltransferase [Vibrio mimicus MB-451]
Length = 315
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 143/315 (45%), Gaps = 84/315 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAG AA L L +SEH I+ + TKPD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGNPDFAARHLAALLSSEHEIIAVYTKPDRPAGRGQKLTASPVKTLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K + E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SEESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQ--------NKLEKLSKILI--IDTIKKIEYDMTKLF 131
+T +T+ + K++ + I IDT + + +L
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIESIDTSASMYDKLAEL- 175
Query: 132 FKPQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPF 172
PQ+ +I + A +K+++A+ ++W+ A I R I AFNP+
Sbjct: 176 -GPQALLECLQDIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAVHIERCIRAFNPW 234
Query: 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
P +++ + +N +K+W+A + ++ PGTI+ + +GI V G++V+ L LQ
Sbjct: 235 P--MSHFEAAENS---IKVWQARVETRAVSQTPGTIIQAD-KSGIYVATGQDVLVLESLQ 288
Query: 233 KNNKKKISATEFING 247
KK + + +N
Sbjct: 289 IPGKKALPVQDILNA 303
>gi|309751782|gb|ADO81766.1| Methionyl-tRNA formyltransferase [Haemophilus influenzae R2866]
Length = 318
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDWSLSA + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 DSQSNYAEKLSKEEAQLDWSLSAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIF+GT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFSGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|238021728|ref|ZP_04602154.1| hypothetical protein GCWU000324_01631 [Kingella oralis ATCC 51147]
gi|237866342|gb|EEP67384.1| hypothetical protein GCWU000324_01631 [Kingella oralis ATCC 51147]
Length = 309
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
ILP DT+ + +KL +L I+ +++++ L PQ G +YA + K+EA ++
Sbjct: 156 ILPSDTANEVHDKLMQLGAAAIVADLQQLQLSGC-LNATPQPENGITYAQKLSKDEAQIN 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A T+ RKI AFNP P A T + + K +KIW A A++ GT+L+ +
Sbjct: 215 WQEDAATVSRKIRAFNPVPAAWTQW-----QGKPMKIWVAEAVA--GNGAAGTVLSAD-A 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+GI++ CG +++ ELQ K+++A F+ G
Sbjct: 267 SGIVIACGAGALRITELQPAGSKRMTAAAFLAG 299
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT AAA L+ + + +I L+LT+PD GRGM+L SPVK+ A +++
Sbjct: 1 MKIIFAGTPDFAAAALNAIAAAGFDIPLVLTQPDRPKGRGMQLQASPVKQAAQALGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E LL +++ DIM+V ILP++
Sbjct: 61 QPEKLRGNA-------EALALLREMDADIMVVAAYGLILPQE 95
>gi|305674304|ref|YP_003865976.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|305412548|gb|ADM37667.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 317
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVLTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ L+ F I + +LPE
Sbjct: 63 PEKVRLKEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLD---AGDMISKVEVDIEETDNVGTLHDKLSVAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + ++ NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQVRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W + + +PGT++ V GI+V G + LL ELQ KK++
Sbjct: 239 NGQN----LKVWASKKTPAPTKAEPGTVVAVE-KEGIIVATGNDTALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|328877395|pdb|3R8X|A Chain A, Crystal Structure Of Methionyl-Trna Formyltransferase From
Yersinia Pestis Complexed With L-Methionine
Length = 318
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 74 IANETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFK 133
I +T +L+KIE I PEDTS TL +KL +L ++ T++++ +
Sbjct: 147 IGLDTGAMLHKIE------CAIQPEDTSATLYDKLAQLGPQGLLITLQQLAAGTA--LAE 198
Query: 134 PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWK 193
Q+ +YA + K EA LDW+LSA + R I AFNP+P +Y+I ++ +K+W+
Sbjct: 199 VQNETQATYAEKLSKEEAKLDWTLSATQLERCIRAFNPWP--VSYFIV---DEQPIKVWQ 253
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
A L +PGTI++ + H GI V V+ + +LQ KK +SA + +N
Sbjct: 254 AQVLPAGEDAEPGTIIHADKH-GIQVATADGVLNITQLQPAGKKAMSAADLLN 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A H I +
Sbjct: 8 LRIIFAGTPDFAARHLGALLSSQHKIVGVFTQPDRPAGRGNKLTPSPVKILAEHHGIPVF 67
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + DIM+V+ ILP
Sbjct: 68 QPKSLRPEENQHLVAD--------LNADIMVVVAYGLILP 99
>gi|389580157|ref|ZP_10170184.1| methionyl-tRNA formyltransferase [Desulfobacter postgatei 2ac9]
gi|389401792|gb|EIM64014.1| methionyl-tRNA formyltransferase [Desulfobacter postgatei 2ac9]
Length = 315
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 140/309 (45%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLY-NSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+I+F GT + L+ L + +I+L +T+PD GRG KL+ SPVK+ AL I++
Sbjct: 5 RIVFMGTPEFSVPALEALAKDPGFDILLAVTQPDRPKGRGKKLSPSPVKQAALNLGIEVY 64
Query: 61 QP--------ISL--KLNGKYHKIANETHKLLNKI-----EFDIMIVMGILP-------- 97
QP ISL L Y + L ++ ++ I I +LP
Sbjct: 65 QPEKINTPEGISLISGLKPDYFVVVAFGQILSRQMLDIPQKYPINIHASLLPKYRGASPI 124
Query: 98 --------EDTSLTLQNKLEKL--SKILIID---------------------------TI 120
E T +T EK+ IL++D TI
Sbjct: 125 QAAILNMDEHTGVTTMVMAEKMDAGDILLMDTTPVDPEETASMLHDRLSLMGADLIIKTI 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
IE++ PQ + +Y ++KK++ ++W+ SA+++ INA P+PGA T
Sbjct: 185 HGIEHNQVTPV--PQDHSNATYVTMLKKSDGRINWNGSARSVCAHINAMTPWPGAFTELC 242
Query: 181 SYQNKKKFLKIWKA--HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
K LKI+KA +LSI S+ PGTI+ N G+ V G V+++LEL ++ K+
Sbjct: 243 G-----KRLKIFKAVLSSLSIPSSALPGTIVCCN-DKGLFVAAGNGVVQVLELMGSSGKR 296
Query: 239 ISATEFING 247
+ A F+ G
Sbjct: 297 LDAAAFLCG 305
>gi|22127892|ref|NP_671315.1| methionyl-tRNA formyltransferase [Yersinia pestis KIM10+]
gi|45440099|ref|NP_991638.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|51597956|ref|YP_072147.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis IP
32953]
gi|108809223|ref|YP_653139.1| methionyl-tRNA formyltransferase [Yersinia pestis Antiqua]
gi|108813988|ref|YP_649755.1| methionyl-tRNA formyltransferase [Yersinia pestis Nepal516]
gi|145597482|ref|YP_001161557.1| methionyl-tRNA formyltransferase [Yersinia pestis Pestoides F]
gi|150260711|ref|ZP_01917439.1| methionyl-tRNA formyltransferase [Yersinia pestis CA88-4125]
gi|153948316|ref|YP_001402831.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162419460|ref|YP_001605205.1| methionyl-tRNA formyltransferase [Yersinia pestis Angola]
gi|165927879|ref|ZP_02223711.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936425|ref|ZP_02224993.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010576|ref|ZP_02231474.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213335|ref|ZP_02239370.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167398510|ref|ZP_02304034.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167418935|ref|ZP_02310688.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425625|ref|ZP_02317378.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468245|ref|ZP_02332949.1| methionyl-tRNA formyltransferase [Yersinia pestis FV-1]
gi|170022576|ref|YP_001719081.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis
YPIII]
gi|186897152|ref|YP_001874264.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis
PB1/+]
gi|218927447|ref|YP_002345322.1| methionyl-tRNA formyltransferase [Yersinia pestis CO92]
gi|229836277|ref|ZP_04456444.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis Pestoides A]
gi|229840099|ref|ZP_04460258.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842181|ref|ZP_04462336.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904519|ref|ZP_04519630.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis Nepal516]
gi|270488263|ref|ZP_06205337.1| methionyl-tRNA formyltransferase [Yersinia pestis KIM D27]
gi|294502315|ref|YP_003566377.1| methionyl-tRNA formyltransferase [Yersinia pestis Z176003]
gi|384120799|ref|YP_005503419.1| methionyl-tRNA formyltransferase [Yersinia pestis D106004]
gi|384124681|ref|YP_005507295.1| methionyl-tRNA formyltransferase [Yersinia pestis D182038]
gi|384137782|ref|YP_005520484.1| methionyl-tRNA formyltransferase [Yersinia pestis A1122]
gi|384412870|ref|YP_005622232.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420544663|ref|ZP_15042869.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-01]
gi|420549967|ref|ZP_15047613.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-02]
gi|420555424|ref|ZP_15052468.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-03]
gi|420561070|ref|ZP_15057381.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-04]
gi|420566105|ref|ZP_15061922.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-05]
gi|420571722|ref|ZP_15067023.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-06]
gi|420577081|ref|ZP_15071868.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-07]
gi|420582426|ref|ZP_15076737.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-08]
gi|420587557|ref|ZP_15081375.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-09]
gi|420592881|ref|ZP_15086165.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-10]
gi|420598529|ref|ZP_15091225.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-11]
gi|420604096|ref|ZP_15096182.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-12]
gi|420609430|ref|ZP_15101030.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-13]
gi|420614676|ref|ZP_15105711.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-14]
gi|420620093|ref|ZP_15110425.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-15]
gi|420625160|ref|ZP_15115014.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-16]
gi|420630338|ref|ZP_15119721.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-19]
gi|420635468|ref|ZP_15124307.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-25]
gi|420641081|ref|ZP_15129365.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-29]
gi|420646225|ref|ZP_15134087.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-32]
gi|420651884|ref|ZP_15139156.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-34]
gi|420657291|ref|ZP_15144037.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-36]
gi|420662639|ref|ZP_15148807.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-42]
gi|420667634|ref|ZP_15153321.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-45]
gi|420672963|ref|ZP_15158168.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-46]
gi|420678458|ref|ZP_15163171.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-47]
gi|420683688|ref|ZP_15167873.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-48]
gi|420688858|ref|ZP_15172469.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-52]
gi|420694660|ref|ZP_15177549.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-53]
gi|420699900|ref|ZP_15182140.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-54]
gi|420706076|ref|ZP_15187012.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-55]
gi|420711363|ref|ZP_15191816.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-56]
gi|420716725|ref|ZP_15196574.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-58]
gi|420722376|ref|ZP_15201381.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-59]
gi|420728020|ref|ZP_15206393.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-60]
gi|420733128|ref|ZP_15210992.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-61]
gi|420738590|ref|ZP_15215928.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-63]
gi|420743831|ref|ZP_15220624.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-64]
gi|420749714|ref|ZP_15225557.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-65]
gi|420754756|ref|ZP_15230088.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-66]
gi|420760874|ref|ZP_15234933.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-71]
gi|420766045|ref|ZP_15239618.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-72]
gi|420771081|ref|ZP_15244123.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-76]
gi|420776434|ref|ZP_15248957.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-88]
gi|420781884|ref|ZP_15253740.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-89]
gi|420787341|ref|ZP_15258517.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-90]
gi|420792785|ref|ZP_15263424.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-91]
gi|420797915|ref|ZP_15268029.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-92]
gi|420803309|ref|ZP_15272885.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-93]
gi|420808476|ref|ZP_15277564.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-94]
gi|420814290|ref|ZP_15282763.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-95]
gi|420819407|ref|ZP_15287412.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-96]
gi|420824502|ref|ZP_15291962.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-98]
gi|420830318|ref|ZP_15297217.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-99]
gi|420835135|ref|ZP_15301558.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-100]
gi|420840261|ref|ZP_15306202.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-101]
gi|420845874|ref|ZP_15311284.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-102]
gi|420851197|ref|ZP_15316046.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-103]
gi|420856801|ref|ZP_15320756.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-113]
gi|421761665|ref|ZP_16198465.1| methionyl-tRNA formyltransferase [Yersinia pestis INS]
gi|21542047|sp|Q8ZJ80.1|FMT_YERPE RecName: Full=Methionyl-tRNA formyltransferase
gi|73919429|sp|Q664V3.1|FMT_YERPS RecName: Full=Methionyl-tRNA formyltransferase
gi|123072597|sp|Q1C2X8.1|FMT_YERPA RecName: Full=Methionyl-tRNA formyltransferase
gi|123246111|sp|Q1CCX5.1|FMT_YERPN RecName: Full=Methionyl-tRNA formyltransferase
gi|166215599|sp|A4TH22.1|FMT_YERPP RecName: Full=Methionyl-tRNA formyltransferase
gi|166988372|sp|A7FNK3.1|FMT_YERP3 RecName: Full=Methionyl-tRNA formyltransferase
gi|238687337|sp|A9R926.1|FMT_YERPG RecName: Full=Methionyl-tRNA formyltransferase
gi|238688469|sp|B1JJH7.1|FMT_YERPY RecName: Full=Methionyl-tRNA formyltransferase
gi|238691392|sp|B2K505.1|FMT_YERPB RecName: Full=Methionyl-tRNA formyltransferase
gi|21961029|gb|AAM87566.1|AE014004_4 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis KIM10+]
gi|45434954|gb|AAS60515.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|51591238|emb|CAH22904.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis IP
32953]
gi|108777636|gb|ABG20155.1| methionyl-tRNA formyltransferase [Yersinia pestis Nepal516]
gi|108781136|gb|ABG15194.1| methionyl-tRNA formyltransferase [Yersinia pestis Antiqua]
gi|115346058|emb|CAL18924.1| methionyl-tRNA formyltransferase [Yersinia pestis CO92]
gi|145209178|gb|ABP38585.1| methionyl-tRNA formyltransferase [Yersinia pestis Pestoides F]
gi|149290119|gb|EDM40196.1| methionyl-tRNA formyltransferase [Yersinia pestis CA88-4125]
gi|152959811|gb|ABS47272.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162352275|gb|ABX86223.1| methionyl-tRNA formyltransferase [Yersinia pestis Angola]
gi|165915541|gb|EDR34150.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920155|gb|EDR37456.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990666|gb|EDR42967.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205633|gb|EDR50113.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962929|gb|EDR58950.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051014|gb|EDR62422.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055315|gb|EDR65109.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169749110|gb|ACA66628.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis
YPIII]
gi|186700178|gb|ACC90807.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis
PB1/+]
gi|229678637|gb|EEO74742.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis Nepal516]
gi|229690491|gb|EEO82545.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696465|gb|EEO86512.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706345|gb|EEO92352.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis Pestoides A]
gi|262360395|gb|ACY57116.1| methionyl-tRNA formyltransferase [Yersinia pestis D106004]
gi|262364345|gb|ACY60902.1| methionyl-tRNA formyltransferase [Yersinia pestis D182038]
gi|270336767|gb|EFA47544.1| methionyl-tRNA formyltransferase [Yersinia pestis KIM D27]
gi|294352774|gb|ADE63115.1| methionyl-tRNA formyltransferase [Yersinia pestis Z176003]
gi|320013374|gb|ADV96945.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342852911|gb|AEL71464.1| methionyl-tRNA formyltransferase [Yersinia pestis A1122]
gi|391433124|gb|EIQ94493.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-01]
gi|391434057|gb|EIQ95301.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-02]
gi|391436792|gb|EIQ97717.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-03]
gi|391449125|gb|EIR08874.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-04]
gi|391449706|gb|EIR09404.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-05]
gi|391451927|gb|EIR11383.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-06]
gi|391465092|gb|EIR23315.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-07]
gi|391466642|gb|EIR24698.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-08]
gi|391468790|gb|EIR26632.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-09]
gi|391482549|gb|EIR38991.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-10]
gi|391483087|gb|EIR39482.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-12]
gi|391483418|gb|EIR39777.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-11]
gi|391497328|gb|EIR52198.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-13]
gi|391498317|gb|EIR53098.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-15]
gi|391501872|gb|EIR56232.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-14]
gi|391512921|gb|EIR66193.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-16]
gi|391514596|gb|EIR67688.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-19]
gi|391516193|gb|EIR69110.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-25]
gi|391528540|gb|EIR80345.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-29]
gi|391531499|gb|EIR82991.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-34]
gi|391532643|gb|EIR84004.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-32]
gi|391545648|gb|EIR95714.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-36]
gi|391547334|gb|EIR97238.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-42]
gi|391548056|gb|EIR97892.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-45]
gi|391561706|gb|EIS10212.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-46]
gi|391562826|gb|EIS11204.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-47]
gi|391564903|gb|EIS13063.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-48]
gi|391577038|gb|EIS23511.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-52]
gi|391577936|gb|EIS24277.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-53]
gi|391589069|gb|EIS34010.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-55]
gi|391592619|gb|EIS37015.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-54]
gi|391593184|gb|EIS37516.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-56]
gi|391606034|gb|EIS48816.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-60]
gi|391608008|gb|EIS50546.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-58]
gi|391608701|gb|EIS51166.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-59]
gi|391620659|gb|EIS61792.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-61]
gi|391621569|gb|EIS62597.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-63]
gi|391629941|gb|EIS69783.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-64]
gi|391632106|gb|EIS71671.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-65]
gi|391643380|gb|EIS81557.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-71]
gi|391646144|gb|EIS83935.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-72]
gi|391649500|gb|EIS86881.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-66]
gi|391655942|gb|EIS92625.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-76]
gi|391662864|gb|EIS98762.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-88]
gi|391667904|gb|EIT03183.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-89]
gi|391669458|gb|EIT04588.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-90]
gi|391673085|gb|EIT07840.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-91]
gi|391687123|gb|EIT20469.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-93]
gi|391688709|gb|EIT21904.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-92]
gi|391689992|gb|EIT23068.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-94]
gi|391701260|gb|EIT33284.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-95]
gi|391704390|gb|EIT36052.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-96]
gi|391705045|gb|EIT36645.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-98]
gi|391715918|gb|EIT46417.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-99]
gi|391720698|gb|EIT50698.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-100]
gi|391721255|gb|EIT51209.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-101]
gi|391731701|gb|EIT60370.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-102]
gi|391734365|gb|EIT62628.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-103]
gi|391737533|gb|EIT65410.1| methionyl-tRNA formyltransferase [Yersinia pestis PY-113]
gi|411177987|gb|EKS47999.1| methionyl-tRNA formyltransferase [Yersinia pestis INS]
Length = 315
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 74 IANETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFK 133
I +T +L+KIE I PEDTS TL +KL +L ++ T++++ +
Sbjct: 144 IGLDTGAMLHKIE------CAIQPEDTSATLYDKLAQLGPQGLLITLQQLAAGTA--LAE 195
Query: 134 PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWK 193
Q+ +YA + K EA LDW+LSA + R I AFNP+P +Y+I ++ +K+W+
Sbjct: 196 VQNETQATYAEKLSKEEAKLDWTLSATQLERCIRAFNPWP--VSYFIV---DEQPIKVWQ 250
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
A L +PGTI++ + H GI V V+ + +LQ KK +SA + +N
Sbjct: 251 AQVLPAGEDAEPGTIIHADKH-GIQVATADGVLNITQLQPAGKKAMSAADLLN 302
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A H I +
Sbjct: 5 LRIIFAGTPDFAARHLGALLSSQHKIVGVFTQPDRPAGRGNKLTPSPVKILAEHHGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + DIM+V+ ILP
Sbjct: 65 QPKSLRPEENQHLVAD--------LNADIMVVVAYGLILP 96
>gi|359799912|ref|ZP_09302464.1| methionyl-tRNA formyltransferase [Achromobacter arsenitoxydans SY8]
gi|359362024|gb|EHK63769.1| methionyl-tRNA formyltransferase [Achromobacter arsenitoxydans SY8]
Length = 313
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT A D L + H+I L++T+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRIVFAGTPEFARIAFDALRAAGHDIPLVMTQPDRPAGRGLKLTPSPVKQAALDADIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A + +LL ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAQARELLERVAPDVMVVAAYGLILPQ 101
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 135 QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKA 194
Q G +YA + K EA LD A+ + R++ AFNP PGA I +K+W+A
Sbjct: 201 QPEEGVTYAAKLDKAEAALDCVQPAELLARRVRAFNPVPGA---TIRLPGLPDAVKVWRA 257
Query: 195 HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
AL +T PG+++ V+ G+ + GK V++LLELQK K+ F+ G
Sbjct: 258 QALDEATTVAPGSVVRVD-ATGVDIATGKGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|293602353|ref|ZP_06684799.1| methionyl-tRNA formyltransferase [Achromobacter piechaudii ATCC
43553]
gi|292819115|gb|EFF78150.1| methionyl-tRNA formyltransferase [Achromobacter piechaudii ATCC
43553]
Length = 313
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A D L + H+I L++T+PD +GRG+KL SPVK+ AL I +
Sbjct: 1 MRLVFAGTPEFARIAFDALRAAGHDIALVMTQPDRPAGRGLKLTPSPVKQAALDAGIPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A E LL ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAEARALLEQVAPDVMVVAAYGLILPQ 101
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 91 IVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNE 150
+V+ I + + L + L I+ ++ +E D L + Q G +YA + K E
Sbjct: 159 VVVPIGADTDAAQLHDALAAAGGQAIVQALEALEKD--GLTPRKQPEAGVTYAAKLDKAE 216
Query: 151 AVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILN 210
A LD + A+ + R++ AFNP PGA I +K+W+A AL +T +PG++L
Sbjct: 217 AALDCTQPAQLLARRVRAFNPVPGAS---IRLPGLPDPVKVWRAQALEGAATAEPGSVLR 273
Query: 211 VNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ GI + CG V++LLELQK K+ F+ G
Sbjct: 274 AD-GQGIDIACGDGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|297617046|ref|YP_003702205.1| methionyl-tRNA formyltransferase [Syntrophothermus lipocalidus DSM
12680]
gi|297144883|gb|ADI01640.1| methionyl-tRNA formyltransferase [Syntrophothermus lipocalidus DSM
12680]
Length = 315
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 132/313 (42%), Gaps = 79/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT+ A L L + H++ L++T+PD GRG ++ SPVK A + +++
Sbjct: 1 MRIVFMGTAEFAVPSLYRLIMAGHDVALVVTQPDRPRGRGKRVASSPVKLLAEEFGVRLF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP +K E+ K + + D+++V+ ILP
Sbjct: 61 QPERIK--------DEESIKTIKSCDPDLIVVVAYGQILPSKLLYHPPFGCVNLHGSLLP 112
Query: 99 --DTSLTLQNKLEKLSKILIIDTI--------------KKIEY--DMT------------ 128
+ +Q + +++ + T+ K +E D T
Sbjct: 113 RYRGAAPIQRAIMAGERVVGVTTMYMNESMDGGDIILQKSVEISDDATFGEVYQELSEIG 172
Query: 129 -KLFFKPQSNIGESYAPLIKKNEA-------------VLDWSLSAKTIMRKINAFNPFPG 174
L + IG AP I ++++ V+DW A+ I +I A NP PG
Sbjct: 173 GDLLLETVDQIGWGTAPRIPQDDSRATYAPVIRAEDEVIDWRREAREISNQIRALNPQPG 232
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T + LK +++ L E+ PG ++ V G +V GK + +LE+Q+
Sbjct: 233 ASTTLDGVR-----LKFFRSRVLEDEADALPGQVVQVIDEEGFIVQTGKGQLVILEVQRE 287
Query: 235 NKKKISATEFING 247
KK++ A+EFI G
Sbjct: 288 GKKRLPASEFIKG 300
>gi|319775434|ref|YP_004137922.1| methionyl-tRNA formyltransferase [Haemophilus influenzae F3047]
gi|329122538|ref|ZP_08251121.1| methionyl-tRNA formyltransferase [Haemophilus aegyptius ATCC 11116]
gi|317450025|emb|CBY86239.1| methionyl-tRNA formyltransferase [Haemophilus influenzae F3047]
gi|327473143|gb|EGF18567.1| methionyl-tRNA formyltransferase [Haemophilus aegyptius ATCC 11116]
Length = 318
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KI DI LP +TS +L NKL +L+ +ID + +E +K + Q
Sbjct: 146 DTGDMLHKIYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+YA + K EA LDWSL A + R I AFNP+P A + LK+++A
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFLTEDKDGNAQILKVYQAEV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L K GTIL+ + NGI + V+KLL+LQ KK +SA + +NG
Sbjct: 258 LP-HQDKPAGTILSAD-KNGIQIATVDGVLKLLQLQPAGKKPMSAQDLLNG 306
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+ D +GRG KL SPVK+ A +++I++
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQSDKPAGRGKKLQASPVKQLAEQNNIRVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL E L + D+M+V+ ILP
Sbjct: 64 QPKSL--------FKEEAQSELKALNADVMVVVAYGLILP 95
>gi|238763702|ref|ZP_04624661.1| Methionyl-tRNA formyltransferase [Yersinia kristensenii ATCC 33638]
gi|238698004|gb|EEP90762.1| Methionyl-tRNA formyltransferase [Yersinia kristensenii ATCC 33638]
Length = 320
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 95/170 (55%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE +I PEDTS TL +KL +L ++ T++++ + + ++
Sbjct: 152 DTGDMLHKIECNIQ------PEDTSATLYDKLAQLGPQGLLVTLQQLAEGRAQPEVQDEA 205
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P +Y++ ++ +K+W+A
Sbjct: 206 QV--TYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWP--VSYFVV---DEQPIKVWQAQV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L+ PGTI+ + H GI + V+ + +LQ KK +SA + +N
Sbjct: 259 LATVDNVAPGTIIQADKH-GIQIATADGVLNITQLQPAGKKAMSAADLLN 307
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S+H IV + T+PD +GRG KL SPVK A +H+I +
Sbjct: 10 LRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHNIPVF 69
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + DIM+V+ ILP
Sbjct: 70 QPKSLRPEENQHLVAD--------LNADIMVVVAYGLILP 101
>gi|378824114|ref|ZP_09846656.1| methionyl-tRNA formyltransferase [Sutterella parvirubra YIT 11816]
gi|378597064|gb|EHY30410.1| methionyl-tRNA formyltransferase [Sutterella parvirubra YIT 11816]
Length = 320
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 28 LILTKPDLHSGRGMKLNFSPVKKYALKHSI----KIIQPISLKLNGKYHKIANETHKLLN 83
LIL +P L RG+ + ++ + SI + PI+ + ++ K+
Sbjct: 96 LILPQPVLDCARGIGRDKD-IRAINIHASILPRWRGAAPIARSIEAGDAEMGVTLMKMEL 154
Query: 84 KIEFDIMIVMG---ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGE 140
++ MI M I P++T++TL ++ ++ L++D + + L PQ G
Sbjct: 155 GLDTGPMIAMAKTPIAPDETTVTLTERMARMGGELLVDALTHPD----DLVGTPQPEEGV 210
Query: 141 SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE 200
+YA + K EA + W+ SA I R++ AF PFPG + + +KIWKA +
Sbjct: 211 TYAEKLLKEEARIKWTDSAAQIERRLRAFTPFPG-----VFFMKGDVPVKIWKAEVVEAP 265
Query: 201 STKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
++ +PGT+L+ + V CG+ ++ L LQK K K + F+
Sbjct: 266 ASAEPGTVLDAK--GALTVACGEGALRCLVLQKPGKPKTESGPFLQ 309
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AA L L + H++ L+L++PD SGRGMKL SPVK A++H I+++
Sbjct: 1 MRIIFAGTPDFAAEALRALLAAGHDVALVLSQPDRPSGRGMKLTASPVKTLAIEHGIEVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
P +L L K + + H+ L + D+++V ILP+
Sbjct: 61 TPQTLSLK-KAPEESAAIHQKLRDVGADLLVVAAYGLILPQ 100
>gi|384261729|ref|YP_005416915.1| Methionyl-tRNA formyltransferase [Rhodospirillum photometricum DSM
122]
gi|378402829|emb|CCG07945.1| Methionyl-tRNA formyltransferase [Rhodospirillum photometricum DSM
122]
Length = 307
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 84/150 (56%), Gaps = 13/150 (8%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
E T +++ + L L +I+ ++ + L +PQ + G +YA I K EA LDWS
Sbjct: 159 EATGVSVHDALSALGARMIVPGLEGLAAG--TLEARPQPDEGITYAAKIDKAEARLDWSQ 216
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
+A + R+I AF+PFPGA + +++ + + +A E + PGT+L+ +G+
Sbjct: 217 TADEVDRRIRAFSPFPGA---WFPLGDERVKVLMSRAE----EGSGAPGTVLD----DGL 265
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
LV CG+ ++LL +Q+ + ++A +F+ G
Sbjct: 266 LVACGRGAVRLLSVQRAGRAPLAAADFLRG 295
>gi|384175315|ref|YP_005556700.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349594539|gb|AEP90726.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 317
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHK---------IANETHKLLNKIEFD------IMIVMGILPE-------- 98
P ++L + K + ++L K D I + +LPE
Sbjct: 63 PEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAG---DMISKVEVDIEETDNVGTLHDKLSAAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + +I NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W++ + +PGT++ V GI+V G + LL ELQ KK++
Sbjct: 239 NGQN----LKVWESKKTPAPTKAEPGTVVAVE-KEGIIVATGNDTALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|380510246|ref|ZP_09853653.1| methionyl-tRNA formyltransferase [Xanthomonas sacchari NCPPB 4393]
Length = 307
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 135/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGT------SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK 54
MK++FAGT S+ AAA H +V + T+PD +GRG L SPVK A+
Sbjct: 1 MKLVFAGTPDFAVPSLRAAA-------QRHEVVAVYTQPDRPAGRGRGLTPSPVKLEAVA 53
Query: 55 -----------------HSIKIIQP----------------ISLKLNG----------KY 71
+++ +QP +++ +G ++
Sbjct: 54 RGIPVLQPQTLRSPETLQALRALQPDLIVVVAYGLILPKAVLAIPTHGCWNVHASLLPRW 113
Query: 72 HKIA----------NETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKI 114
A +ET L ++E D V+ I ++T L ++L L
Sbjct: 114 RGAAPIQRAIEAGDSETGVCLMQMEAGLDTGPVLLSQRTPIGADETGGQLHDRLAALGAQ 173
Query: 115 LIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
++ D + + + + +PQ G +YA + K +A LDW A + R++ AF+P+P
Sbjct: 174 VLADGLGLLRAGL-RPVAQPQPEAGVTYAHKLDKAQARLDWQQPAAQLARQVRAFDPWPV 232
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A+ + +++ A AL + + PGT+L + GI + CG+ ++L LQ++
Sbjct: 233 AEAVLAG-----ERVRVHGAIALDLAHGQPPGTVLTAS-RQGIDIACGQGALRLRVLQRD 286
Query: 235 NKKKISATEFIN 246
K I+A +++N
Sbjct: 287 GGKAITAADYLN 298
>gi|336450418|ref|ZP_08620869.1| methionyl-tRNA formyltransferase [Idiomarina sp. A28L]
gi|336282813|gb|EGN76034.1| methionyl-tRNA formyltransferase [Idiomarina sp. A28L]
Length = 324
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 84/152 (55%), Gaps = 5/152 (3%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DTS +L KL KL + +++T++ + + PQ ++ +YA + K E +D
Sbjct: 156 IEPTDTSASLYEKLAKLGPLALVETLRNMNTGDARAV--PQESVKATYAAKLSKEEGEID 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A I R + AFNP+PG+ ++ Q+ + +K+W+A + K PG+I+ +
Sbjct: 214 WHQPAAFIERCVRAFNPWPGSVFHH--PQHPDQPIKVWRAQVIKGAPAKAPGSIIQAD-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI + CG++ ++LLELQ KK + + +N
Sbjct: 271 TGIDIACGEDTLRLLELQLAGKKPMLIADLLN 302
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
M+IIFAGT AA L L + ++V + T+PD +GRG KL S VK+ A++H++ +
Sbjct: 1 MRIIFAGTPDFAARHLQALLEAHDLDVVAVYTQPDRPAGRGKKLQASAVKQLAVEHNLPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK E L + D+M+V+ ILP
Sbjct: 61 AQPSSLK--------TAEAQAELASWQADVMVVVAYGLILP 93
>gi|120613321|ref|YP_972999.1| methionyl-tRNA formyltransferase [Acidovorax citrulli AAC00-1]
gi|166214865|sp|A1TW87.1|FMT_ACIAC RecName: Full=Methionyl-tRNA formyltransferase
gi|120591785|gb|ABM35225.1| methionyl-tRNA formyltransferase [Acidovorax citrulli AAC00-1]
Length = 329
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P +T+ TL ++L L LI++ ++ L PQ G +YA I+K E+ +D
Sbjct: 163 IAPRETTATLHDRLADLGGRLIVEAMELAA--CGGLAATPQPAEGVTYAHKIEKAESAID 220
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK--KPGTILNVN 212
W L A I R++ AF+PFPGA T Q + +K+W L + + +PG IL V+
Sbjct: 221 WKLPAAAIDRRVRAFDPFPGAST-----QCSAETIKVWGCEPLQVPPPEGAQPGEILQVD 275
Query: 213 FHNGILVVCG-----KNVIKLLELQKNNKKKISATEFING 247
G+ V CG V++L LQ+ K++ +F+ G
Sbjct: 276 -DAGVDVACGGPDGAAGVLRLTVLQRAGGKRLPVGDFLRG 314
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL H I +
Sbjct: 1 MKIIFAGTPEFARVALERLLAAGAEVPLVLTQPDRPAGRGMKLQASPVKQCALAHGIAVA 60
Query: 61 QPISLKLNGKY 71
QP L+L+G+Y
Sbjct: 61 QPRGLRLDGRY 71
>gi|422323719|ref|ZP_16404758.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans C54]
gi|317401263|gb|EFV81904.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans C54]
Length = 313
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A D L + H+I L++T+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARIAFDALRAAGHDIPLVMTQPDRPAGRGLKLTPSPVKQAALDAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A E LL ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAEARALLERVAPDVMVVAAYGLILPQ 101
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 135 QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKA 194
QS G +YA + K EA LD S A + R++ AFNP PGA I +K+W+A
Sbjct: 201 QSEEGVTYAAKLDKAEAALDCSQPAALLARRVRAFNPVPGAS---IRLPGLVDPVKVWRA 257
Query: 195 HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A++ T P ++L +GI + G V++LLELQK K+ F+ G
Sbjct: 258 EAVAQAVTAAPASVLR-TAADGIDIATGDGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|317129259|ref|YP_004095541.1| methionyl-tRNA formyltransferase [Bacillus cellulosilyticus DSM
2522]
gi|315474207|gb|ADU30810.1| methionyl-tRNA formyltransferase [Bacillus cellulosilyticus DSM
2522]
Length = 318
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 133/310 (42%), Gaps = 65/310 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT A IL+ L + +++ L++T+PD GR +L PVK A +H IK+
Sbjct: 1 MKVVFMGTPDFAVPILNQLVENGYDVQLVVTQPDRPKGRKQQLTAPPVKVAAEEHGIKVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL------------------------ 96
QP +K+ ++ K+ ++ F ++ G+L
Sbjct: 61 QPKKIKMEEQWRKVEEVQPDIIITAAFGQILPKGLLEIPPLGCINVHASLLPKYRGGAPI 120
Query: 97 -------PEDTSLTLQNKLEKLSKILII----------DTIKKIEYDMTKL--------- 130
+T +T+ +EKL I+ DT + ++KL
Sbjct: 121 HQSIIDGERETGITIMYMVEKLDAGDILSQKAIPIEENDTTGSMHDKLSKLGATLLLETL 180
Query: 131 --------FFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+ Q+ +YAP I K + +DW+ +A+ I ++ P+P A Y +
Sbjct: 181 PEIQSGTIVAEEQAEDEVTYAPNISKEQEKIDWNKTAREIYNQVRGLAPWPVA---YTTI 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGK-NVIKLLELQKNNKKKISA 241
+ LK+W + + PGTI+NV IL+ CG +V+ + ELQ + KK++
Sbjct: 238 NGNR--LKVWWTEETDETTKETPGTIINVE-EGRILIACGNGSVLSMRELQPSGKKRMDV 294
Query: 242 TEFINGCIKN 251
F+ G K+
Sbjct: 295 KTFLLGAGKD 304
>gi|325662244|ref|ZP_08150859.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471496|gb|EGC74717.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
4_1_37FAA]
Length = 321
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 134/325 (41%), Gaps = 92/325 (28%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT + L+ L + H +VL +T+PD GRG ++ F+PVK+ A++H I +
Sbjct: 1 MRVIFMGTPEFSVGTLEALVEAGHEVVLAVTQPDKPKGRGKEMQFTPVKEAAIRHQIPVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
QP+ ++ K E +L E D+++V+ ILP+
Sbjct: 61 QPVKVR-----EKACVE---VLKSYEADVIVVIAFGQILPKSILELTPYGCINVHASLLP 112
Query: 100 ---------------------TSLTLQNKLEK----LSKILIIDTIK-------KIEYDM 127
T++ + L+ L K +I+D + K+
Sbjct: 113 KYRGAAPIQWAVIDGEKVSGVTTMQMDEGLDTGDMILKKEVILDEKETGGSLHDKLAEAG 172
Query: 128 TKLFFKPQSNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
L + + E AP K+ E +DW A+ I R I NP+P
Sbjct: 173 AALCVETLKRLEEGTAPAEKQGETTTDYAKMLTKQMGEIDWKQPAEKIERLIRGLNPWPS 232
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKK------------PGTILNVNFHNGILVVCG 222
A TY+ +K +KIW A + ES +K PGTI V + V G
Sbjct: 233 AYTYW-----NQKVMKIWLADTEADESGEKEKMASEEAKHPEPGTITAVA-KDRFSVQTG 286
Query: 223 KNVIKLLELQKNNKKKISATEFING 247
+ ++ +LELQ KK++ A F+ G
Sbjct: 287 EGLLTVLELQIPGKKRMDAGAFLRG 311
>gi|115522682|ref|YP_779593.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
BisA53]
gi|115516629|gb|ABJ04613.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
BisA53]
Length = 327
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 65/305 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IF GT A L L H+IV + T+ +GRGMKL +PV++ A K I ++
Sbjct: 16 LRLIFMGTPDFAVPTLRALAARGHDIVAVYTREAKPAGRGMKLQPTPVEQEARKLGIPVL 75
Query: 61 QPISLK---------------------------------------LNG----KYHKIANE 77
P +L+ L+G ++ A
Sbjct: 76 TPKTLRTAEAAAEFAAFNADAAVVVAYGMILPQPILDAPKFGCFNLHGSLLPRWRGAAPI 135
Query: 78 THKLL-NKIEFDIMIV---MGILPEDTSLTLQNKL-EKLSKILIIDTIKKI--------- 123
++ E +M++ +G+ D ++T + + E ++ I + D + I
Sbjct: 136 NRAIMAGDAESGVMVMKMDIGLDTGDVAMTARLPITETMTAIDLHDALAPIGAKLMADAI 195
Query: 124 -EYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+ +L F QS G +YA I K EA +DW+ A+ ++R I+ +PFPGA +
Sbjct: 196 DALERDELTFTKQSEDGVTYAAKIDKAEARIDWAKPAREVLRHIHGLSPFPGAWCEW-PI 254
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
+ + +KI + + + +PG +L+ + + + CG I++L+LQ+ K+ +SA
Sbjct: 255 EGEPVRVKILRCEL--AKGSGEPGALLD----DRLAIACGDGAIRVLQLQRAGKQPMSAE 308
Query: 243 EFING 247
EF+ G
Sbjct: 309 EFLRG 313
>gi|334132226|ref|ZP_08505987.1| Methionyl-tRNA formyltransferase [Methyloversatilis universalis
FAM5]
gi|333442872|gb|EGK70838.1| Methionyl-tRNA formyltransferase [Methyloversatilis universalis
FAM5]
Length = 316
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L + DI +DT+ TL ++L L+IDT+ + + PQ
Sbjct: 151 DTGPMLAERTVDIAA------DDTTATLHDRLAVTGAQLLIDTLPALLAGRIRAV--PQP 202
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
G YA I K EA LD+ A + R I AFNPFPGA ++ +K+W+A
Sbjct: 203 ADGACYAAKIGKAEAALDFRRPAVELARAIRAFNPFPGA---LMTVDGTP--IKLWRAR- 256
Query: 197 LSIE-STKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+E ++ +PG IL V +G+++ CG+ +++ ELQK K++ A +F++G
Sbjct: 257 --VEPASGEPGRILAVG-DDGVVIACGEGALRVTELQKPGGKRLPAADFLHG 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I FAGT AA LD L + +I L+LT+PD +GRGMKL SPVK+ AL H + + Q
Sbjct: 10 RIAFAGTPEFAARALDALATFDCDIPLVLTQPDRPAGRGMKLMPSPVKQRALAHGLTVAQ 69
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL 96
P +LK + LL + + +++ +L
Sbjct: 70 PDTLKTPELRAPLVEAAPDLLVVVAYGLLLPRAVL 104
>gi|304404143|ref|ZP_07385805.1| methionyl-tRNA formyltransferase [Paenibacillus curdlanolyticus
YK9]
gi|304347121|gb|EFM12953.1| methionyl-tRNA formyltransferase [Paenibacillus curdlanolyticus
YK9]
Length = 318
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 69/311 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L+ + S H +V ++T+PD GR +L PVK+ AL H I +
Sbjct: 1 MKIVFMGTPSFAVPSLERVLASGHEVVAVITQPDRPKGRKRELAPPPVKEAALAHGIPVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL---------- 108
QP ++ +A+ +L+ + ++ +L P + + L
Sbjct: 61 QPERMRSEEAIALVASLAPELIITAAYGQILPKAVLDVPPLGCINVHGSLLPKYRGGAPI 120
Query: 109 -------EKLSKILII---------DTIKKI-----EYDMTKLFFK-------------- 133
E ++ + I+ D I +I E D + F+
Sbjct: 121 QRSIINGESVTGVTIMYMAEGLDTGDMISRIEVPIDEADTSGTLFEKLSAAGADLLMQTL 180
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
PQ + SYAP + +++ +DW+ SA+ + ++ +P GA T +
Sbjct: 181 PSIEAGTVQAVPQQHEDASYAPNLTRDDERIDWTRSARQLYDQVRGLSPMAGAFTQW--- 237
Query: 183 QNKKKFLKIWKAHALSIESTKK-----PGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
N + F KIW+ ++ + + PGT+L+ + GI V G+ + LL++Q + K+
Sbjct: 238 -NGEPF-KIWRCQPVAAKGSGAPAAATPGTVLSASAE-GITVQTGEGALLLLDIQPSGKR 294
Query: 238 KISATEFINGC 248
+ A++++ G
Sbjct: 295 AMPASDWLKGA 305
>gi|421483688|ref|ZP_15931261.1| methionyl-tRNA formyltransferase [Achromobacter piechaudii HLE]
gi|400197971|gb|EJO30934.1| methionyl-tRNA formyltransferase [Achromobacter piechaudii HLE]
Length = 313
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A D L + H+I L++T+PD +GRG+KL SPVK+ AL I +
Sbjct: 1 MRLVFAGTPEFARIAFDALRAAGHDIALVMTQPDRPAGRGLKLTPSPVKQAALDAGIPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A E LL ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAEARALLEQVAPDVMVVAAYGLILPQ 101
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 135 QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKA 194
Q G +YA + K EA LD + A+ + R++ AFNP PGA I +K+W+A
Sbjct: 201 QPEAGVTYAAKLDKAEAALDCTQPAELLERRVRAFNPVPGAS---IRLPGLPDPVKVWRA 257
Query: 195 HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
AL+ +T +PG +L + +GI + G V++LLELQK K+ F+ G
Sbjct: 258 QALATPTTAEPGRVLRAD-ASGIDIATGNGVLRLLELQKAGGKRQQVDVFVRG 309
>gi|392547673|ref|ZP_10294810.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas rubra ATCC 29570]
Length = 314
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
++TS +L NKL +L ++ T+ K+ L +PQ + +YA + K EA +DW
Sbjct: 162 DETSASLYNKLAELGPDALVATLDKLA--AGALNAEPQDDAQANYAKKLSKEEANIDWQQ 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNG 216
A+ I R I AFNP+P + Y Q + + +KIW+A +S + T PG +L+ + G
Sbjct: 220 DAQQIERNIRAFNPWP------VCYTQMQGQTVKIWQAKVVSQQGT--PGQVLSAD-KGG 270
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFING 247
I + CG+ + + +LQ KK +SA +F+NG
Sbjct: 271 ITIACGEQALTITQLQPQGKKPMSAQDFLNG 301
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L S H++V + ++PD +GRG KL S VK AL+H + +
Sbjct: 5 LRIVFAGTPDFAAKHLAALIASHHDVVAVYSQPDRPAGRGKKLKASEVKTLALEHDLPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP SLK +++ L + D+M+V+
Sbjct: 65 QPHSLK--------SDDAQAELAALNADVMVVV 89
>gi|54298583|ref|YP_124952.1| hypothetical protein lpp2647 [Legionella pneumophila str. Paris]
gi|73919400|sp|Q5X1U6.1|FMT_LEGPA RecName: Full=Methionyl-tRNA formyltransferase
gi|53752368|emb|CAH13800.1| hypothetical protein lpp2647 [Legionella pneumophila str. Paris]
Length = 314
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 135/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ ++FAGT LD L S H++ + T+PD +GRG KL SPVK++A+ H I +
Sbjct: 4 LTVVFAGTPEFGLPCLDALIQSRHHLKAVYTQPDRPAGRGRKLQESPVKEWAINHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP LN K + +E L+ ++ D+M+V+ ILP+
Sbjct: 64 QP----LNFKNQEAVDE----LSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L L K + + DT + + K+
Sbjct: 116 RWRGASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKATCPVTSSDTAGSLHDKLAKMS 175
Query: 132 FKPQSNIGESYAP-----LIKKNE------------AVLDWSLSAKTIMRKINAFNPFPG 174
KP ++ E+ A ++ NE A ++W SA I RKI AFNP+P
Sbjct: 176 VKPLLDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPV 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T + L+I +A A I ST+ PG +LNV+ NG+LV N + + ++Q
Sbjct: 236 AYTLA-----GELMLRIHQAKATDIMSTEMPGMVLNVD-KNGMLVATNDNALLVEKIQFP 289
Query: 235 NKKKISATEFIN 246
K IS +++N
Sbjct: 290 GAKVISVRDWLN 301
>gi|68249188|ref|YP_248300.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 86-028NP]
gi|378696822|ref|YP_005178780.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (fMet )
N-formyltransferase [Haemophilus influenzae 10810]
gi|81336406|sp|Q4QMV7.1|FMT_HAEI8 RecName: Full=Methionyl-tRNA formyltransferase
gi|68057387|gb|AAX87640.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 86-028NP]
gi|301169341|emb|CBW28940.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (fMet )
N-formyltransferase [Haemophilus influenzae 10810]
Length = 318
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 96/174 (55%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ ++ID + +E +K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSVLIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+ D +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQSDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|319897840|ref|YP_004136037.1| methionyl-tRNA formyltransferase [Haemophilus influenzae F3031]
gi|386266648|ref|YP_005830140.1| Methionyl-tRNA formyltransferase [Haemophilus influenzae R2846]
gi|309973884|gb|ADO97085.1| Methionyl-tRNA formyltransferase [Haemophilus influenzae R2846]
gi|317433346|emb|CBY81724.1| methionyl-tRNA formyltransferase [Haemophilus influenzae F3031]
Length = 318
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 96/174 (55%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ ++ID + +E +K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSVLIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|342903782|ref|ZP_08725587.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M21621]
gi|341954452|gb|EGT80932.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M21621]
Length = 318
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 DSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK ISA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPISAQDLLNG 306
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQFELKALNADVMVVVAYGLILP 95
>gi|147678125|ref|YP_001212340.1| methionyl-tRNA formyltransferase [Pelotomaculum thermopropionicum
SI]
gi|189044570|sp|A5D1B9.1|FMT_PELTS RecName: Full=Methionyl-tRNA formyltransferase
gi|146274222|dbj|BAF59971.1| methionyl-tRNA formyltransferase [Pelotomaculum thermopropionicum
SI]
Length = 313
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ T+ + L L L++ T++ + M PQ I SYAP +K + ++ W
Sbjct: 158 EDTAGTVHDALAVLGARLLVQTLELVGQGMAPRV--PQQGI-PSYAPPLKTEDELIRWDR 214
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-KPGTILNVNFHNG 216
+A+ I +I NP+PGA+TY+ K LKIW+A + E KPG +++ N
Sbjct: 215 TARDIFNQIRGMNPWPGARTYF-----SGKVLKIWRAAVVEEEGAALKPGQVMSAG-RNA 268
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFING 247
I+V G+ I + ELQ +++SA +F+ G
Sbjct: 269 IVVGTGRGRIAVTELQLQGARRLSAGDFLRG 299
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT A L L + H+++ ++T+PD GRG K PVK+ A +I +
Sbjct: 1 MRVVFMGTPDFAVPSLKALVEAGHDVLAVVTQPDRPRGRGRKETPPPVKQAAHALNIPVF 60
Query: 61 QPISLK 66
QP+ +K
Sbjct: 61 QPLKIK 66
>gi|315635056|ref|ZP_07890337.1| methionyl-tRNA formyltransferase [Aggregatibacter segnis ATCC
33393]
gi|315476318|gb|EFU67069.1| methionyl-tRNA formyltransferase [Aggregatibacter segnis ATCC
33393]
Length = 318
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL + + +ID + + K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAEFAPSALIDVLDNL--GTGKFTAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA L+W LSA + R I AFNP+P A + QN + LK+++A
Sbjct: 198 DTQSNYADKLSKEEAKLNWQLSAAQLERNIRAFNPWPMAYLELMDGQNNPQTLKVYQATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L K PGTIL + GI + V+ LL+LQ KK +SA + +NG
Sbjct: 258 LP-HVNKTPGTILAAD-KQGIQIATADGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALLNSSHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E L + D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KPEAQSELCALYADVMVVVAYGLILPQ 96
>gi|428279168|ref|YP_005560903.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. natto
BEST195]
gi|291484125|dbj|BAI85200.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. natto
BEST195]
Length = 317
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHK---------IANETHKLLNKIEFD------IMIVMGILPE-------- 98
P ++L + K + ++L K D I + +LPE
Sbjct: 63 PEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAG---DMISKVEVDIEETDNVGTLHDKLSAAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + +I NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W++ + +PGT++ V GI+V G LL ELQ KK++
Sbjct: 239 NGQN----LKVWESKKTPAPTKAEPGTVVAVE-KEGIIVATGNETALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|417844299|ref|ZP_12490344.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M21639]
gi|341956930|gb|EGT83345.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M21639]
Length = 318
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T LL+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDLLHKVYCDI------LPTETSTSLYNKLAELAPSELIDVLDNLEN--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 DSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDSNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ + KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 306
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVISVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|160939812|ref|ZP_02087159.1| hypothetical protein CLOBOL_04703 [Clostridium bolteae ATCC
BAA-613]
gi|158437246|gb|EDP15011.1| hypothetical protein CLOBOL_04703 [Clostridium bolteae ATCC
BAA-613]
Length = 328
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 132/321 (41%), Gaps = 82/321 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT + L L + H ++ ++T+PD GRG ++ +PVK A+++ I +
Sbjct: 1 MRIVFMGTPDFSVPALKALVEAGHQVIAVVTQPDKPKGRGKEVQMTPVKIQAMEYGIPVY 60
Query: 61 QPISLK-------LNG------------------------------------KYHKIA-- 75
QP ++ L G KY A
Sbjct: 61 QPAKVREASFVEVLKGLEADAYVVIAFGQILPKAVLELPKYGCINIHASLLPKYRGAAPI 120
Query: 76 ------NETHKLLNKIEFDIMIVMGILPEDTSLTLQNKL------EKLSKI---LIIDTI 120
E + + D+ + G + E + ++ K +KLS LI+ T+
Sbjct: 121 QWCVIDGERETGITTMMMDVGLDTGDMLEKAVIPIEEKETGGSLHDKLSMAGGDLILSTL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
KK+E L PQ++ G YA ++ K+ +DW+ A +I R I NP+P A T +
Sbjct: 181 KKLEEG--TLVRTPQTDEGTCYAKMLTKSLGDIDWNQGAVSIERLIRGLNPWPSAYTMW- 237
Query: 181 SYQNKKKFLKIWKAHALS--------------IESTKKPGTILNVNFHNGILVVCGKNVI 226
K +KIW A ++ E+ PGT++ + G++V G ++
Sbjct: 238 ----NGKTIKIWAADVIAGREAAEFLSESGVPAETGTAPGTVVCSD-KRGLVVCTGGGLL 292
Query: 227 KLLELQKNNKKKISATEFING 247
+ ELQ KK++ F+ G
Sbjct: 293 SIRELQMEGKKRMDTPAFLRG 313
>gi|223937553|ref|ZP_03629456.1| methionyl-tRNA formyltransferase [bacterium Ellin514]
gi|223893716|gb|EEF60174.1| methionyl-tRNA formyltransferase [bacterium Ellin514]
Length = 316
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 5/150 (3%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
ED S L ++L ++ L++ TI+ E+ K+ +PQ G SYA I K + LDW+
Sbjct: 162 EDNSQLLHDRLAQIGAALLVPTIR--EFVSGKIIARPQPVEGVSYARKILKEDGKLDWTQ 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + ++ F P+PGA T ++ + K LKIW+A + ++ PG IL+ + GI
Sbjct: 220 PAHVLWNRVRGFTPWPGAFT-HLPAEPKPLLLKIWQAEVIE-GASGNPGEILSAD-KTGI 276
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
++ CG+ +K+ LQ+ ++++A +F+ G
Sbjct: 277 IIACGEKALKVTTLQREGGRRMNAQDFLTG 306
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 1 MKIIFAGTSISAAAILDTL-YNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
++IIF GT+ A A L+ L ++ ++V ++T+PD GR +KL SPVK+ ALKH++ +
Sbjct: 4 LRIIFMGTAELACASLEALTQQTDFSVVAVVTQPDRPKGRDLKLQPSPVKQVALKHALPV 63
Query: 60 IQP 62
+QP
Sbjct: 64 LQP 66
>gi|258622989|ref|ZP_05718004.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM573]
gi|424810975|ref|ZP_18236309.1| methionyl-tRNA formyltransferase [Vibrio mimicus SX-4]
gi|258584772|gb|EEW09506.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM573]
gi|342321986|gb|EGU17782.1| methionyl-tRNA formyltransferase [Vibrio mimicus SX-4]
Length = 315
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K + E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SEESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIESSDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++A+ ++W+ A I R I AFNP+P
Sbjct: 177 PQALLECLQDIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAVHIERCIRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+++ + +N +K+W+A + PGTI+ + +GI V G++V+ L LQ
Sbjct: 236 -MSHFEAAENS---IKVWQARVETRAVNDTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|333374959|ref|ZP_08466789.1| methionyl-tRNA formyltransferase [Kingella kingae ATCC 23330]
gi|332974244|gb|EGK11177.1| methionyl-tRNA formyltransferase [Kingella kingae ATCC 23330]
Length = 309
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ + + L L I+ +++++ + L PQ G +YA + K EA ++W+ +
Sbjct: 160 DTANEVHDALMDLGATAIVRDLQQLQAK-SSLHATPQPETGVTYAQKLSKEEAKINWNEA 218
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ + RKI AFNP P T + +Q K +KIW AHA++ + GT+L V+ NGI+
Sbjct: 219 AEVVARKIRAFNPVP---TVWTEWQGKP--MKIWAAHAVAQNGSA--GTVLAVDA-NGIV 270
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG I + ELQ K+++A F+ G
Sbjct: 271 VACGSGAICITELQVAGSKRMTAAAFLAG 299
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + +I L+LT+PD GRGM+L SPVK+ AL +++
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFDIPLVLTQPDRPKGRGMQLQASPVKQVALDLGLRVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++ D+M+ ILP+D
Sbjct: 61 QPEKLRNNA-------EALQMLRDVDADVMVAAAYGLILPQD 95
>gi|417841176|ref|ZP_12487281.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M19501]
gi|417841948|ref|ZP_12488043.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M19501]
gi|341947728|gb|EGT74369.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M19501]
gi|341949770|gb|EGT76371.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M19501]
Length = 318
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 96/174 (55%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ ++ID + +E +K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSVLIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAVQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+ D +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQSDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|254372757|ref|ZP_04988246.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570484|gb|EDN36138.1| methionyl-tRNA formyltransferase [Francisella novicida GA99-3549]
Length = 313
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 138/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ AL + +
Sbjct: 4 LNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKGRGKKVQFSPVKEVALANHTPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+S K N E + + +++ D+++V+ I+P+
Sbjct: 64 QPLSFKKN-------PEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L + L L +I DT + + KL
Sbjct: 117 KWRGAAPIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLS 176
Query: 132 FKP-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
KP + GE SYA I K E ++D++ SA I I AF P+PGA
Sbjct: 177 IKPLLETLEKIEIIKPEPQQGEPSYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGA-- 234
Query: 178 YYISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y+I + +K+ + L + +K GTI++++ +G + +I+ +LQ NK
Sbjct: 235 YFIL---DDEAIKVGEFEILYQNTDNRKAGTIIDID-RSGFDIATSDKIIRFRQLQFPNK 290
Query: 237 KKISATEFING 247
K ++ + +NG
Sbjct: 291 KMLNIVDILNG 301
>gi|325294266|ref|YP_004280780.1| methionyl-tRNA formyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064714|gb|ADY72721.1| Methionyl-tRNA formyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 311
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 132/308 (42%), Gaps = 72/308 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++F GT A L L+ + I L++T+PD +GRG ++ PVK A K +I +
Sbjct: 5 LKVVFMGTPDFAVPSLKKLFEAGFEIPLVITQPDRPAGRGKRIKPPPVKVLAEKFNIPVY 64
Query: 61 QPISLKLN-----------------GKYHKI-ANE------------------------- 77
QP +K N Y KI NE
Sbjct: 65 QPEKVKGNEELLNKLKEISPDLIVVAAYGKILPNEILDLPKFGCINVHASLLPEYRGASP 124
Query: 78 -THKLLNKIEFDIMIVMGILPE-----------------DTSLTLQNKLEKLSKILIIDT 119
LL+ E + +M I PE D + TL +KL L L+++T
Sbjct: 125 IQSALLDGKEKTGVTIMLISPELDAGDIISQKEVLIDRKDNAQTLHDKLANLGAELLVET 184
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
I Y KL PQ N +Y I K +DW+L A+ I I AF P+P A Y
Sbjct: 185 IPY--YVSGKLKPIPQENSKATYCKPITKEMGKIDWTLPAEKIFNMIRAFTPWPSA---Y 239
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+++ K+ +K+ +A IE + PG ++ + +++ G+ +K+ +L+ KK+I
Sbjct: 240 TTFRGKR--IKLLEAE--PIEGSGNPGEVIKADKE--LVISTGEGALKVKKLRPEGKKEI 293
Query: 240 SATEFING 247
S EFI G
Sbjct: 294 SGEEFIRG 301
>gi|394990078|ref|ZP_10382910.1| hypothetical protein SCD_02504 [Sulfuricella denitrificans skB26]
gi|393790343|dbj|GAB72549.1| hypothetical protein SCD_02504 [Sulfuricella denitrificans skB26]
Length = 309
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 12/161 (7%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M++ LP +DT+ TL +KL L I+ ++++E+ L +PQ + +YA +
Sbjct: 147 MLLRAALPIADDDTAQTLHDKLAVLGASSIVSALQQLEH--GTLHAQPQDDSAATYAAKL 204
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
K E ++DW SA + R + A+N FP A+ + S + +IW+A ++ S PG
Sbjct: 205 SKAEGLIDWHKSAAELARSVRAYNAFPVAQARFQS-----EIWRIWQAQ-VAQRSEGAPG 258
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
IL + GILV CG+ + L ELQK K++ A+ F+ G
Sbjct: 259 EILQAD-KEGILVRCGEGALLLKELQKPGGKRLPASSFLVG 298
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT +AA L L + ++I L+LT+PD +GRGM+L SPVK+ AL+H + ++
Sbjct: 1 MRLIFAGTPEFSAAALAALIEAGYDIALVLTQPDRPAGRGMRLTPSPVKQMALQHELSVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP +LK E L + D M+V
Sbjct: 61 QPAALK--------DAEVQAQLAAVNADAMVV 84
>gi|315583678|pdb|3Q0I|A Chain A, Methionyl-Trna Formyltransferase From Vibrio Cholerae
Length = 318
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 64/305 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+P+ +GRG KL SPVK AL+H++ +
Sbjct: 8 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVY 67
Query: 61 QPISLKLNGKYHKIANETHK---------LLNKIEFD------IMIVMGILPE------- 98
QP + K + ++A LL K+ D I + ILP
Sbjct: 68 QPENFKSDESKQQLAALNADLXVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPI 127
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------PQS----- 136
+T +T+ L L I T+ D + + PQ+
Sbjct: 128 QRSIWAGDSETGVTIXQXDVGLDTGDXLKIATLPIEASDTSASXYDKLAELGPQALLECL 187
Query: 137 -NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+I + A +K+++ + ++WS +A I R I AFNP+P + +
Sbjct: 188 QDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPXSH-----F 242
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
+ + +K+W+A + T+ PGTI+ + +GI V G++V+ L LQ KK +
Sbjct: 243 EVAENSIKVWQARVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIPGKKALPVQ 301
Query: 243 EFING 247
+ +N
Sbjct: 302 DILNA 306
>gi|118497395|ref|YP_898445.1| methionyl-tRNA formyltransferase [Francisella novicida U112]
gi|195536087|ref|ZP_03079094.1| methionyl-tRNA formyltransferase [Francisella novicida FTE]
gi|166214896|sp|A0Q626.1|FMT_FRATN RecName: Full=Methionyl-tRNA formyltransferase
gi|118423301|gb|ABK89691.1| methionyl-tRNA formyltransferase [Francisella novicida U112]
gi|194372564|gb|EDX27275.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
novicida FTE]
Length = 313
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 138/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ AL + +
Sbjct: 4 LNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKGRGKKVQFSPVKEVALANHTPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+S K N E + + +++ D+++V+ I+P+
Sbjct: 64 QPLSFKKN-------PEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIARYGCLNIHVSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L + L L +I DT + + KL
Sbjct: 117 KWRGAAPIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLS 176
Query: 132 FKP-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
KP + GE SYA I K E ++D++ SA I I AF P+PGA
Sbjct: 177 IKPLLETLEKIEIIKPEPQQGEPSYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGA-- 234
Query: 178 YYISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y+I + +K+ + L + +K GTI++++ +G + +I+ +LQ NK
Sbjct: 235 YFIL---DDEAIKVGEFEILYQNTDNRKAGTIIDID-RSGFDIATSDKIIRFRQLQFPNK 290
Query: 237 KKISATEFING 247
K ++ + +NG
Sbjct: 291 KMLNIVDILNG 301
>gi|433446079|ref|ZP_20410210.1| methionyl-tRNA formyltransferase [Anoxybacillus flavithermus
TNO-09.006]
gi|432000824|gb|ELK21716.1| methionyl-tRNA formyltransferase [Anoxybacillus flavithermus
TNO-09.006]
Length = 314
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 134/311 (43%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M I+F GT A IL+ L +N+V ++T+PD GR +L PVK A + I +
Sbjct: 1 MNIVFMGTPDFAVPILEQLIKDGYNVVGVVTQPDKPKGRKQQLTPPPVKVAAESYGIPVF 60
Query: 61 QPISLKLNGKY-HKIANETH--------KLLNKIEFD------IMIVMGILP-------- 97
QP ++ +Y H IA + ++L K D I + +LP
Sbjct: 61 QPTKIREKEQYEHVIALQPDLIVTAAFGQILPKPLLDAPTYGCINVHASLLPELRGGAPI 120
Query: 98 --------EDTSLTLQNKLEKLSKILII----------DTIKKIEYDMTKLFFK------ 133
E T +T+ +EKL I+ DT+ + +++ +
Sbjct: 121 HYAILQGKEKTGITIMYMVEKLDAGDILTQVEVPIDERDTVGTLHDKLSQAGARLLSETL 180
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
Q + ++A IK + +DW+ + + I I NP+P A T Y
Sbjct: 181 PKLLRGDIMPIKQDDEQATFAYNIKPEQERIDWTKTGEDIYNHIRGMNPWPVAYTMY--- 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISA 241
++ KIW + S KPGTI+ V +GI+V G + IK+ ELQ K+K+SA
Sbjct: 238 --GEERWKIWWGEKVPASSQAKPGTIVAVE-QDGIIVATGNETAIKITELQPAGKRKMSA 294
Query: 242 TEFINGCIKNI 252
T+F+ G +I
Sbjct: 295 TDFLRGTTISI 305
>gi|381400644|ref|ZP_09925568.1| methionyl-tRNA formyltransferase [Kingella kingae PYKK081]
gi|380834407|gb|EIC14251.1| methionyl-tRNA formyltransferase [Kingella kingae PYKK081]
Length = 309
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ + + L L I+ +++++ + L PQ G +YA + K EA ++W+ +
Sbjct: 160 DTANEVHDALMDLGATAIVRDLQQLQAK-SSLHVTPQPETGVTYAQKLSKEEAKINWNEA 218
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ + RKI AFNP P T + +Q K +KIW AHA++ + GT+L + NGI+
Sbjct: 219 AEVVARKIRAFNPVP---TAWTEWQGKT--MKIWAAHAVAQNGSA--GTVLAADA-NGIV 270
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG I + ELQ K+++A F+ G
Sbjct: 271 VACGSGAICITELQAAGSKRMTAAAFLAG 299
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL +++
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLQASPVKQAALDLGLRVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++ D+M+V ILP+D
Sbjct: 61 QPEKLRNNA-------EALQMLRDVDADVMVVAAYSLILPQD 95
>gi|337288557|ref|YP_004628029.1| Methionyl-tRNA formyltransferase [Thermodesulfobacterium sp. OPB45]
gi|334902295|gb|AEH23101.1| Methionyl-tRNA formyltransferase [Thermodesulfobacterium geofontis
OPF15]
Length = 311
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 87/149 (58%), Gaps = 8/149 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
D + +L KL +L K I+ I+ + K+ +P+ I SYAP++KK + +
Sbjct: 161 DDANSLSQKLAQLGKETILSAIELHKKGELKIIPQPEEGI--SYAPILKKEDGFFTFEEP 218
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ I +KI AF P+P A TYY K K LK++ A A+ ++ +KPGTIL++N +GIL
Sbjct: 219 AEKIEKKIKAFLPWPSAFTYY-----KNKLLKVFSAKAVPLKHEEKPGTILDIN-KDGIL 272
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V K+ I L E+Q KKKISA EF G
Sbjct: 273 VATSKDAILLKEVQLEGKKKISAYEFACG 301
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+IIF G+ A L+ LY E ++ ++T+PD GRG+K + SPVK +A +K+++
Sbjct: 5 RIIFFGSPEFAIPSLEALYEKEE-VIAVVTQPDKPKGRGLKPSPSPVKAWASSKGLKVLE 63
Query: 62 PISLK 66
PI LK
Sbjct: 64 PIRLK 68
>gi|62259769|gb|AAX77868.1| unknown protein [synthetic construct]
Length = 348
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ AL + +
Sbjct: 30 LNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKGRGKKVQFSPVKEVALANHTPVF 89
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+S K N E + + +++ D+++V+ I+P+
Sbjct: 90 QPLSFKKN-------PEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLP 142
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L + L L +I DT + + KL
Sbjct: 143 KWRGAAPIQRAIQAGDTKTGVCIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLS 202
Query: 132 FKP-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
KP + GE +YA I K E ++D++ SA I I AF P+PGA
Sbjct: 203 IKPLLETLEKIEIIKPEPQQGEPTYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGA-- 260
Query: 178 YYISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y+I + +K+ + L + +K GTI+++ + +G + +I+ +LQ NK
Sbjct: 261 YFIL---DDEAIKVGEFEILYQNTDNRKAGTIIDI-YRSGFDIATSDKIIRFRQLQFPNK 316
Query: 237 KKISATEFING 247
K ++ + +NG
Sbjct: 317 KMLNIVDILNG 327
>gi|145633870|ref|ZP_01789591.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 3655]
gi|145635939|ref|ZP_01791625.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittAA]
gi|229845580|ref|ZP_04465707.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 6P18H1]
gi|144985242|gb|EDJ92085.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 3655]
gi|145266798|gb|EDK06816.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittAA]
gi|229811515|gb|EEP47217.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 6P18H1]
Length = 318
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E +K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|148827777|ref|YP_001292530.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittGG]
gi|166214900|sp|A5UH91.1|FMT_HAEIG RecName: Full=Methionyl-tRNA formyltransferase
gi|148719019|gb|ABR00147.1| hypothetical protein CGSHiGG_06230 [Haemophilus influenzae PittGG]
Length = 318
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E +K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELATSALIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|337281352|ref|YP_004620824.1| methionyl-tRNA formyltransferase [Ramlibacter tataouinensis TTB310]
gi|334732429|gb|AEG94805.1| Candidate methionyl-tRNA formyltransferase [Ramlibacter
tataouinensis TTB310]
Length = 353
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 10/157 (6%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
M + P+DT+ +L +KL L LI++ ++ K PQ G +YA I K EA
Sbjct: 188 MPVAPDDTTGSLHDKLAVLGARLIVEALELAACGGLKPV--PQPAQGVTYAHKIDKGEAQ 245
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA--LSIESTKKPGTILN 210
+DWS A+ I R++ AF+P PGA + +K+W+A + GTIL
Sbjct: 246 VDWSQPAEAIARRVRAFDPSPGASGVL-----NGEAVKLWRAEVDRDAPSPGAAAGTILR 300
Query: 211 VNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V+CG+ V+++ +LQ+ K++ A +F+ G
Sbjct: 301 AD-AAGVSVLCGRGVLRITQLQRAGGKRLQAADFLRG 336
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A A L L+ + +I L+LT+PD +GRG+KL SPVK++AL H + +
Sbjct: 1 MRVVFAGTPEFARAALQRLHAAGFDIPLVLTQPDRPAGRGLKLQASPVKQFALDHGLPVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GK A + L D+M+V ILP+
Sbjct: 61 QPRSLRLDGKCPGDAADARTALEAARADVMVVAAYGLILPQ 101
>gi|416893350|ref|ZP_11924538.1| methionyl-tRNA formyltransferase [Aggregatibacter aphrophilus ATCC
33389]
gi|347813904|gb|EGY30556.1| methionyl-tRNA formyltransferase [Aggregatibacter aphrophilus ATCC
33389]
Length = 318
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI P+DTS L +KL +++ +I+ + + D T +PQ
Sbjct: 146 DTGDMLHKVFCDID------PQDTSADLYHKLAEIALNALIEVLNHLT-DGT-FTAEPQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
++ +YA + K EA LDW LSA + R I AFNP+P A Q + LK+++A
Sbjct: 198 DMQSNYAEKLSKEEAKLDWQLSAAQLERNIRAFNPWPMAYLQLTDEQGNPQTLKVYQATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L ++ PGTI++ + NGI + V+ LL+LQ +KK +SA + +NG
Sbjct: 258 LP-SVSQTPGTIISAD-KNGIQIATADGVLNLLQLQPASKKPMSAQDLLNG 306
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +S HN++ + T+PD +GRG KL S VK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALIDSPHNVIAVYTQPDKPAGRGKKLQASSVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KPETQAELTALQADVMVVVAYGLILPQ 96
>gi|84496643|ref|ZP_00995497.1| methionyl-tRNA formyltransferase [Janibacter sp. HTCC2649]
gi|84383411|gb|EAP99292.1| methionyl-tRNA formyltransferase [Janibacter sp. HTCC2649]
Length = 322
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 63/308 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT +A L+ L S H +V +LT+PD +GRG L+ SPVK A++ I+++
Sbjct: 1 MRLVFAGTPETAVPALEALLASPHEVVAVLTRPDARAGRGRTLHPSPVKALAVERGIEVL 60
Query: 61 QPISLK---LNGKYHKIANET-------------------HKLLN-------------KI 85
P+S + + +IA + H +N +
Sbjct: 61 TPVSPRDPEFQERLREIAPDACPVVAYGALLPPDVLDIPVHGWINLHFSVLPAWRGAAPV 120
Query: 86 EFDIMI--------------------VMGIL-----PEDTSLTLQNKLEKLSKILIIDTI 120
+ IM V+G++ P+DTS L ++L L++ T+
Sbjct: 121 QRAIMAGDEATGATTFVIEAGLDTGPVLGLMTETIRPDDTSGVLLDRLAHAGAGLLVATM 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E L PQ G S+A + +A + W+ A + R + P PGA T +
Sbjct: 181 DGLESG--DLHAVPQPAEGVSHAAKLTTADAEITWTTPAYAVSRHVRGCTPAPGAWTTFR 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNF-HNGILVVCGKNVIKLLELQKNNKKKI 239
+ + A AL + +P + V+ + V V+ L E++ KK +
Sbjct: 239 GERLGIGPFVVAGADALEARESSEPLSPGEVHVTKKAVHVGTASGVVTLGEVRPQGKKPM 298
Query: 240 SATEFING 247
+A ++ G
Sbjct: 299 AAADWARG 306
>gi|407717362|ref|YP_006838642.1| methionyl-tRNA formyltransferase [Cycloclasticus sp. P1]
gi|407257698|gb|AFT68139.1| Methionyl-tRNA formyltransferase [Cycloclasticus sp. P1]
Length = 307
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 11/157 (7%)
Query: 92 VMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEA 151
V+ I PEDTS +L NKL L +ID + + D +L Q+N +YA + K EA
Sbjct: 152 VLPIQPEDTSSSLHNKLSTLGANALIDLLPLV--DAQQLSPSRQNNNEATYAHKLSKQEA 209
Query: 152 VLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNV 211
++DWS A + R I +NP+P A T K L+IW+A + ++ +PG V
Sbjct: 210 LIDWSKPAADVQRSIQGYNPWPVAHTLL-----NNKPLRIWQATVTQLPTSGQPG---EV 261
Query: 212 NFH-NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
N N + V CG I++ ELQ NK+++SA+++++
Sbjct: 262 NTEKNKLFVACGDYFIEVNELQPANKRRMSASDYLSA 298
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M IIFAGT + L L S+H++ + T+PD +GRG K+ SPVK+ AL +I I
Sbjct: 1 MNIIFAGTPDFSVPTLQALMASQHHVCAVYTQPDRPAGRGRKVQLSPVKQCALDANIPIE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP++ K + + L + + D+MIV+ ILP+
Sbjct: 61 QPVNFK--------SAASITTLEQYQADLMIVVAYGIILPD 93
>gi|208779190|ref|ZP_03246536.1| methionyl-tRNA formyltransferase [Francisella novicida FTG]
gi|208744990|gb|EDZ91288.1| methionyl-tRNA formyltransferase [Francisella novicida FTG]
Length = 313
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG ++ FSPVK+ AL + +
Sbjct: 4 LNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKGRGKRVQFSPVKEVALANHTPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+S K N E + + +++ D+++V+ I+P+
Sbjct: 64 QPLSFKKN-------PEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIARYGCLNIHVSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L + L L +I DT + + KL
Sbjct: 117 KWRGAAPIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLS 176
Query: 132 FKP-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
KP + GE SYA I K E ++D++ SA I I AF P+PGA
Sbjct: 177 IKPLLETLEKIEIIKPEPQQGEPSYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGA-- 234
Query: 178 YYISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y+I + +K+ + L + +K GTI++++ +G + +I+ +LQ NK
Sbjct: 235 YFIL---DDEAIKVGEFEILYQNTDNRKAGTIIDID-RSGFDIATSDKIIRFRQLQFPNK 290
Query: 237 KKISATEFING 247
K ++ + +NG
Sbjct: 291 KMLNIVDILNG 301
>gi|323141162|ref|ZP_08076063.1| methionyl-tRNA formyltransferase [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414305|gb|EFY05123.1| methionyl-tRNA formyltransferase [Phascolarctobacterium
succinatutens YIT 12067]
Length = 311
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 130/308 (42%), Gaps = 68/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
M+I+F GT A L L S +H I+ ++T+PD GRG KL +PVK+YAL + +
Sbjct: 1 MRIVFMGTPDFAVGSLQALCESGKHEILAVVTQPDRPKGRGNKLLQTPVKEYALAQGLTV 60
Query: 60 -----------------IQP--------------------------ISLKLNGKYHKIA- 75
+QP + L KY A
Sbjct: 61 YQPQKVKTPEFVELLHELQPELIVVAAFGQFLSKEILELPKYGCINVHASLLPKYRGAAP 120
Query: 76 -------NETHKLLNKIEFDIMIVMG------ILP--EDTSL-TLQNKLEKLSKILIIDT 119
E + ++ DI + G ++P E+T++ L L + L++
Sbjct: 121 IQYAIIKGEKESGVTIMQMDIGMDTGAMLDKVVVPIEENTTMGELHYALREQGAALLLQV 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
I KI +PQ N +YA L+ ++ +DWS +A+ + I FNP P + +
Sbjct: 181 IDKIAAGTA--VAEPQDNEQATYATLLDRSMEHIDWSKTAQEVHNLIRGFNPAP---STF 235
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
N K LKIW + S GT++ H+ V CG+ V+++ E+Q +KK++
Sbjct: 236 TKLPNGKG-LKIWGSKMTDKNSAAAAGTVIETGKHS-FFVACGEGVLEITEVQPESKKRM 293
Query: 240 SATEFING 247
A F+NG
Sbjct: 294 PAQVFLNG 301
>gi|419838556|ref|ZP_14361981.1| methionyl-tRNA formyltransferase [Haemophilus haemolyticus HK386]
gi|386910321|gb|EIJ74978.1| methionyl-tRNA formyltransferase [Haemophilus haemolyticus HK386]
Length = 318
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 DSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|253991651|ref|YP_003043007.1| methionyl-tRNA formyltransferase [Photorhabdus asymbiotica]
gi|253783101|emb|CAQ86266.1| methionyl-tRNA formyltransferase [Photorhabdus asymbiotica]
Length = 316
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
++I+FAGT AA L+TL S+H +V +LT+PD +GRG KL F
Sbjct: 5 LRIVFAGTPDFAARHLETLLTSQHEVVGVLTQPDRPAGRGKKLTPSTVKVLAEEHNITVF 64
Query: 46 SPV-------KKYALKHSIKIIQPIS-----------------LKLNG------------ 69
P +++ LK +I ++ L ++G
Sbjct: 65 QPATLRSEENQQWILKQQPDVIIVVAYGLILPKAVLDIPRLGCLNVHGSLLPRWRGAAPI 124
Query: 70 KYHKIANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
+ A + + ++ DI + G I PEDTS +L KL + ++ T+
Sbjct: 125 QRSLWAGDAETGVTIMQMDIGLDTGDMLYKASCPIAPEDTSASLYEKLANIGPNALLKTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I ++ + + + +YA + K EA ++W LSA + R I AFNP+P +
Sbjct: 185 SLIASGKSQPETQNEKLV--TYAEKLSKEEARINWKLSAAHLERCIRAFNPWPMS----- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ + + +KIWKA + +++ +PGT+L + GI + ++ + +LQ KK +S
Sbjct: 238 FFEIEGQPVKIWKADVIEKQTSAEPGTVLQAD-KKGIHIATANGILNITQLQPAGKKAMS 296
Query: 241 ATEFIN 246
A +N
Sbjct: 297 AENLLN 302
>gi|212639616|ref|YP_002316136.1| methionyl-tRNA formyltransferase [Anoxybacillus flavithermus WK1]
gi|212561096|gb|ACJ34151.1| Methionyl-tRNA formyltransferase [Anoxybacillus flavithermus WK1]
Length = 314
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M I+F GT A IL+ L +N+V ++T+PD GR +L PVK A + I ++
Sbjct: 1 MNIVFMGTPDFAVPILEQLIKDGYNVVGVVTQPDKPKGRKQQLTPPPVKVAAESYGIPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILP-------- 97
QP ++ +Y ++ L+ F I + +LP
Sbjct: 61 QPTKIREKEQYEQVIALQPDLIVTAAFGQILPKPLLDAPTYGCINVHASLLPELRGGAPI 120
Query: 98 --------EDTSLTLQNKLEKLSKILII----------DTIKKIEYDMTKLFFK------ 133
E T +T+ +EKL I+ DT+ + +++ +
Sbjct: 121 HYAILQGKEKTGITIMYMVEKLDAGDILTQVEVPIDERDTVGTLHDKLSQAGARLLSETL 180
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
Q++ ++A IK + +DW+ + + I I NP+P A T Y
Sbjct: 181 PKLLRGDITPMKQNDEQATFAYNIKPEQERIDWTKTGEDIYNHIRGMNPWPVAYTTY--- 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISA 241
++ K+W + S KPGTI+ V +GI+V G + IK+ ELQ K+K+SA
Sbjct: 238 --GEERWKLWWGEKVRASSQAKPGTIVAVE-QDGIIVATGNETAIKITELQPAGKRKMSA 294
Query: 242 TEFINGCIKNI 252
T+F+ G +I
Sbjct: 295 TDFLRGTTISI 305
>gi|193071562|ref|ZP_03052471.1| methionyl-tRNA formyltransferase [Escherichia coli E110019]
gi|192955150|gb|EDV85644.1| methionyl-tRNA formyltransferase [Escherichia coli E110019]
Length = 315
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL KL +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAKLGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|254374217|ref|ZP_04989699.1| methionyl-tRNA formyltransferase [Francisella novicida GA99-3548]
gi|385792744|ref|YP_005825720.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151571937|gb|EDN37591.1| methionyl-tRNA formyltransferase [Francisella novicida GA99-3548]
gi|328676890|gb|AEB27760.1| Methionyl-tRNA formyltransferase [Francisella cf. novicida Fx1]
Length = 313
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 138/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ AL + +
Sbjct: 4 LNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKGRGKKVQFSPVKEVALANHTPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+S K N E + + +++ D+++V+ I+P+
Sbjct: 64 QPLSFKKN-------PEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L + L L +I DT + + KL
Sbjct: 117 KWRGAAPIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLS 176
Query: 132 FKP-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
KP + GE SYA I K E ++D++ SA I I AF P+PGA
Sbjct: 177 IKPLLETLEKIEIIKPEPQQGEPSYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGA-- 234
Query: 178 YYISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y+I + +K+ + L + +K GTI++++ +G + +I+ +LQ NK
Sbjct: 235 YFIL---DDEAIKVGEFEILYQNTDNRKVGTIIDID-RSGFDIATSDKIIRFRQLQFPNK 290
Query: 237 KKISATEFING 247
K ++ + +NG
Sbjct: 291 KMLNIVDILNG 301
>gi|333978752|ref|YP_004516697.1| methionyl-tRNA formyltransferase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822233|gb|AEG14896.1| Methionyl-tRNA formyltransferase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 321
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 135/308 (43%), Gaps = 69/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT A L L ++ + +V ++T+PD GRG K+ SPVK+ AL + ++
Sbjct: 1 MRVVFMGTPDFAVPALKALVDAGYPVVGVVTQPDRPKGRGKKIQPSPVKQAALHMGLPVL 60
Query: 61 QP---------------------------------ISLKLNG---------KYHKIANET 78
QP + L G ++ A
Sbjct: 61 QPVRVRDAAFVEQLKQLEPEVIVVAAFGQILPPSILHLPPRGCINIHASLLPRYRGAAPI 120
Query: 79 HKLLNKIEFDIMIVMGILPE--DTS-LTLQNKL---EKLSKILIIDTIKKIEYDMT---- 128
H+ + E + + + ++ E DT + LQ + E+ + + D + +I D+
Sbjct: 121 HRAIMNGERETGVTIMLMDEGLDTGDILLQQAISIGEEDNAGTVHDRLARIGADLLLKTL 180
Query: 129 ------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++ +PQ + +YAP + + + ++DW A+ + +I +P+PGA+T++
Sbjct: 181 YLLKEGRVQGRPQQDSLATYAPPLTREDEIIDWERPARDLYNQIRGLDPWPGARTWW--- 237
Query: 183 QNKKKFLKIWKAHALSIESTKK---PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
++ LK+W+A + E+ + PG ++ ++V G+ + L E+Q +++
Sbjct: 238 --GEQVLKVWRA-GVKEEAAPRGALPGQVIAGGEE--VVVATGRGCLSLREVQLQGGRRL 292
Query: 240 SATEFING 247
EF+ G
Sbjct: 293 PVAEFLRG 300
>gi|89256594|ref|YP_513956.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica LVS]
gi|115315023|ref|YP_763746.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica OSU18]
gi|156502724|ref|YP_001428789.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254367912|ref|ZP_04983932.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica 257]
gi|290953843|ref|ZP_06558464.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica URFT1]
gi|422938949|ref|YP_007012096.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FSC200]
gi|423050958|ref|YP_007009392.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica F92]
gi|122324966|sp|Q0BLC5.1|FMT_FRATO RecName: Full=Methionyl-tRNA formyltransferase
gi|123094504|sp|Q2A2U6.1|FMT_FRATH RecName: Full=Methionyl-tRNA formyltransferase
gi|166214895|sp|A7NCY0.1|FMT_FRATF RecName: Full=Methionyl-tRNA formyltransferase
gi|89144425|emb|CAJ79724.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica LVS]
gi|115129922|gb|ABI83109.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253722|gb|EBA52816.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica 257]
gi|156253327|gb|ABU61833.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407294100|gb|AFT93006.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FSC200]
gi|421951680|gb|AFX70929.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica F92]
Length = 313
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ AL + +
Sbjct: 4 LNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKGRGKKVQFSPVKEVALANHTPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+S K N E + + +++ D+++V+ I+P+
Sbjct: 64 QPLSFKKN-------PEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L + L L +I DT + + KL
Sbjct: 117 KWRGAAPIQRAIQAGDTKTGVCIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLS 176
Query: 132 FKP-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
KP + GE +YA I K E ++D++ SA I I AF P+PGA
Sbjct: 177 IKPLLETLEKIEIIKPEPQQGEPTYAHKITKQEGLIDFTKSAWRISCHIRAFTPWPGA-- 234
Query: 178 YYISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y+I + +K+ + L + +K GTI+++ + +G + +I+ +LQ NK
Sbjct: 235 YFIL---DDEAIKVGEFEILYQNTDNRKAGTIIDI-YRSGFDIATSDKIIRFRQLQFPNK 290
Query: 237 KKISATEFING 247
K ++ + +NG
Sbjct: 291 KMLNIVDILNG 301
>gi|56708025|ref|YP_169921.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670496|ref|YP_667053.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis FSC198]
gi|134301840|ref|YP_001121808.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|254369419|ref|ZP_04985431.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FSC022]
gi|254370508|ref|ZP_04986513.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis FSC033]
gi|254874825|ref|ZP_05247535.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379717264|ref|YP_005305600.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725868|ref|YP_005318054.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis TI0902]
gi|385794680|ref|YP_005831086.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis NE061598]
gi|421751635|ref|ZP_16188674.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis AS_713]
gi|421753491|ref|ZP_16190482.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 831]
gi|421755563|ref|ZP_16192505.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 80700075]
gi|421757215|ref|ZP_16194097.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 80700103]
gi|421759075|ref|ZP_16195909.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 70102010]
gi|424674395|ref|ZP_18111313.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 70001275]
gi|73919393|sp|Q5NGC1.1|FMT_FRATT RecName: Full=Methionyl-tRNA formyltransferase
gi|123359491|sp|Q14HS3.1|FMT_FRAT1 RecName: Full=Methionyl-tRNA formyltransferase
gi|166214897|sp|A4IXN6.1|FMT_FRATW RecName: Full=Methionyl-tRNA formyltransferase
gi|54114089|gb|AAV29678.1| NT02FT0514 [synthetic construct]
gi|56604517|emb|CAG45558.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320829|emb|CAL08941.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis FSC198]
gi|134049617|gb|ABO46688.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151568751|gb|EDN34405.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis FSC033]
gi|157122369|gb|EDO66509.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FSC022]
gi|254840824|gb|EET19260.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159215|gb|ADA78606.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis NE061598]
gi|377827317|gb|AFB80565.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis TI0902]
gi|377828941|gb|AFB79020.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis TIGB03]
gi|409086757|gb|EKM86870.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 831]
gi|409086972|gb|EKM87082.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis AS_713]
gi|409087721|gb|EKM87809.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 80700075]
gi|409091139|gb|EKM91142.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 70102010]
gi|409092670|gb|EKM92637.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 80700103]
gi|417434873|gb|EKT89805.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis 70001275]
Length = 313
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ AL + +
Sbjct: 4 LNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKGRGKKVQFSPVKEVALANHTPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+S K N E + + +++ D+++V+ I+P+
Sbjct: 64 QPLSFKKN-------PEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L + L L +I DT + + KL
Sbjct: 117 KWRGAAPIQRAIQAGDTKTGVCIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLS 176
Query: 132 FKP-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
KP + GE +YA I K E ++D++ SA I I AF P+PGA
Sbjct: 177 IKPLLETLEKIEIIKPEPQQGEPTYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGA-- 234
Query: 178 YYISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y+I + +K+ + L + +K GTI+++ + +G + +I+ +LQ NK
Sbjct: 235 YFIL---DDEAIKVGEFEILYQNTDNRKAGTIIDI-YRSGFDIATSDKIIRFRQLQFPNK 290
Query: 237 KKISATEFING 247
K ++ + +NG
Sbjct: 291 KMLNIVDILNG 301
>gi|262402049|ref|ZP_06078613.1| methionyl-tRNA formyltransferase [Vibrio sp. RC586]
gi|262351695|gb|EEZ00827.1| methionyl-tRNA formyltransferase [Vibrio sp. RC586]
Length = 315
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 135/313 (43%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK +AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTHALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
DT +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSDTGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKN-------------EAVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ I + A +K++ EA ++W+ A I R I AFNP+P
Sbjct: 177 PQALLECLQEIAQGTAVAVKQDDTLANYAHKLSKEEARINWNDEAVHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W A + T+ GTI+ + +GI V G+ ++ L LQ
Sbjct: 237 SH-----FEVAENSIKVWHARVETRAVTQASGTIIQAD-KSGIYVATGQGILVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|373467155|ref|ZP_09558456.1| methionyl-tRNA formyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371759114|gb|EHO47860.1| methionyl-tRNA formyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 318
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 DSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILRAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL S VK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASLVKQLAEQNNISVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|82545650|ref|YP_409597.1| methionyl-tRNA formyltransferase [Shigella boydii Sb227]
gi|416293273|ref|ZP_11650384.1| Methionyl-tRNA formyltransferase [Shigella flexneri CDC 796-83]
gi|417684231|ref|ZP_12333572.1| methionyl-tRNA formyltransferase [Shigella boydii 3594-74]
gi|420327469|ref|ZP_14829214.1| methionyl-tRNA formyltransferase [Shigella flexneri CCH060]
gi|420354784|ref|ZP_14855863.1| methionyl-tRNA formyltransferase [Shigella boydii 4444-74]
gi|421685420|ref|ZP_16125196.1| methionyl-tRNA formyltransferase [Shigella flexneri 1485-80]
gi|123769392|sp|Q31VY9.1|FMT_SHIBS RecName: Full=Methionyl-tRNA formyltransferase
gi|81247061|gb|ABB67769.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella boydii Sb227]
gi|320187009|gb|EFW61721.1| Methionyl-tRNA formyltransferase [Shigella flexneri CDC 796-83]
gi|332090489|gb|EGI95587.1| methionyl-tRNA formyltransferase [Shigella boydii 3594-74]
gi|391248231|gb|EIQ07475.1| methionyl-tRNA formyltransferase [Shigella flexneri CCH060]
gi|391274471|gb|EIQ33279.1| methionyl-tRNA formyltransferase [Shigella boydii 4444-74]
gi|404334908|gb|EJZ61384.1| methionyl-tRNA formyltransferase [Shigella flexneri 1485-80]
Length = 315
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + +++ +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERYIRAFNPWP------MSWLEIERQPVKVWKASVIDTATNAAPGTILEAN- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 270 KQGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|422784175|ref|ZP_16836958.1| methionyl-tRNA formyltransferase [Escherichia coli TW10509]
gi|323974760|gb|EGB69873.1| methionyl-tRNA formyltransferase [Escherichia coli TW10509]
Length = 315
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEACID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|224826195|ref|ZP_03699298.1| methionyl-tRNA formyltransferase [Pseudogulbenkiania ferrooxidans
2002]
gi|224601832|gb|EEG08012.1| methionyl-tRNA formyltransferase [Pseudogulbenkiania ferrooxidans
2002]
Length = 306
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 21/183 (11%)
Query: 74 IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIE 124
+A ++ + ++ D+ + G I ++T+ TL ++L + I+DT+ ++
Sbjct: 125 LAGDSETGITIMQMDVGLDTGAMLSVHPLSIAADETAATLHDRLAEAGARAIVDTLARL- 183
Query: 125 YDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
D +P+ + +YA + K EA +DWS A I R I A+NP PGA T
Sbjct: 184 -DAITPVAQPEEGV--TYAQKLSKAEAEVDWSQPATDIARAIRAYNPVPGAFTRLAG--- 237
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+ LK+W A A E +PGT+L+ + +G+ V G V++L +LQ K+++A +F
Sbjct: 238 --EPLKLWLASAE--EGRGEPGTVLSADA-DGVRVAAGSGVVRLTQLQAAGGKRLAARDF 292
Query: 245 ING 247
+ G
Sbjct: 293 VAG 295
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L L ++ H+I L+LT+PD +GRGMKL SPVK AL+H +++
Sbjct: 1 MKLIFAGTPEFAAAALQALLDAGHDIPLVLTQPDRPAGRGMKLKPSPVKVLALQHGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP++LK E L+ ++ ++M+V
Sbjct: 61 QPLTLK--------TPEAQALIAEVGAEVMVV 84
>gi|374572312|ref|ZP_09645408.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. WSM471]
gi|374420633|gb|EHR00166.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. WSM471]
Length = 307
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 15/149 (10%)
Query: 100 TSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSA 159
T+L L ++L +L L++ + + D L KPQS G +YA I K EA +DW+ A
Sbjct: 163 TALDLHDRLSRLGADLMVRAMAAL--DRGGLQLKPQSEDGVTYAAKIDKAEARIDWTRPA 220
Query: 160 KTIMRKINAFNPFPGAKTYYISYQNKK-KFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
+ ++R I+ +PFPGA + +N + K L+ A+ T PG +L+ + +
Sbjct: 221 REVLRHIHGLSPFPGA---WAELENARVKILRCELAN-----GTGAPGEVLD----DHLT 268
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG+ I+L+ELQ+ K ++ A +F+ G
Sbjct: 269 VACGEGAIRLIELQREGKARMQAADFLRG 297
>gi|345869607|ref|ZP_08821564.1| Methionyl-tRNA formyltransferase [Thiorhodococcus drewsii AZ1]
gi|343922990|gb|EGV33687.1| Methionyl-tRNA formyltransferase [Thiorhodococcus drewsii AZ1]
Length = 312
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P +T +L ++L L + + I T+ +PQ + +YA + K EA +D
Sbjct: 159 IAPRETGGSLHDRLSTLGAEALTAALPGIADGSTE--PEPQDDTAATYAHKLSKEEAAID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA I R+I AF+P+P A+T Q + L+IW A A + + PGT+L+
Sbjct: 217 WSLSATAIERQIRAFDPWPVAQT-----QLDGETLRIWDAEAENDTDSAPPGTVLDTG-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+GI V G +++ LQ + KK + A +++N
Sbjct: 271 SGIRVATGAGQLRITRLQPSGKKPMRAADYLN 302
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT A L L ++ ++V + T+PD +GRG KL SPVK+ AL SI +
Sbjct: 4 LKVIFAGTPEFAVPSLAALIAADLDVVAVYTQPDRPAGRGRKLQMSPVKELALNASIPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP+SLK + + L ++ D+M+V+ +LP D
Sbjct: 64 QPLSLKRD-------PDAVAQLRSLDADLMVVVAYGLLLPTD 98
>gi|291288642|ref|YP_003505458.1| methionyl-tRNA formyltransferase [Denitrovibrio acetiphilus DSM
12809]
gi|290885802|gb|ADD69502.1| methionyl-tRNA formyltransferase [Denitrovibrio acetiphilus DSM
12809]
Length = 307
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 76/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT A L L +++ ++ L++T+ D GRG ++ PVK++AL+ + +I
Sbjct: 1 MKVVFMGTPEMAVPTLRELVDNDIDVALVITQTDKPKGRGKQMQAPPVKEFALEQGLDVI 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QPISLK N +E + L I D ++V ILP+
Sbjct: 61 QPISLKNN-------DEVLEQLKSIAPDFLVVAAYGKILPQAVLDVPKYAPVNVHFSLLP 113
Query: 99 ------------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT 128
DT LQ + K +D +++
Sbjct: 114 KYRGAAPVNWAVINGEKETGVATMLMDAGLDTGDILQVLKTPIEKKTAVDIAEELSETGA 173
Query: 129 KLF---------FKPQSNIGE--SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
+L KP + E +YAP++KK++ +DWS SA+ I I F P+P T
Sbjct: 174 RLLIKTLNEFENIKPVKQVEEDMTYAPMMKKDDGHIDWSKSAEKIECMIRGFVPWP---T 230
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
Y K +K++ A + + GT+ +V + CG+ +K++ELQ KK
Sbjct: 231 AYSRLNGKT--VKLFSAEVVKANEELEAGTVYDVT-KKSFSIKCGEGGLKVVELQPEGKK 287
Query: 238 KISATEFINGC 248
++ F+ G
Sbjct: 288 RMPVGSFLAGA 298
>gi|145637961|ref|ZP_01793601.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittHH]
gi|145268852|gb|EDK08815.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittHH]
Length = 318
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E +K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + ++ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGILNLLQLQPAGKKPMSAQDLLNG 306
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I++
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIRVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|145642284|ref|ZP_01797849.1| methionyl-tRNA formyltransferase [Haemophilus influenzae R3021]
gi|145273040|gb|EDK12921.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 22.4-21]
Length = 318
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E +K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + ++ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGILNLLQLQPAGKKPMSAQDLLNG 306
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+ D +GRG KL SPVK+ A +++I++
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQSDKPAGRGKKLQASPVKQLAEQNNIRVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|315125136|ref|YP_004067139.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas sp. SM9913]
gi|315013649|gb|ADT66987.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas sp. SM9913]
Length = 317
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 90/150 (60%), Gaps = 12/150 (8%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIE-YDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+TS +L KL +L +IDTI ++ D+T +PQ++ +YA + K+EA +DWS+
Sbjct: 163 ETSASLYTKLAELGPGALIDTINRLANGDITP---EPQNDADANYAKKLSKDEANIDWSM 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A+ I R I AFNP+P T Q + +KI++A+ +E + + GT+L + NGI
Sbjct: 220 DAEQIERNIRAFNPWPVCFT-----QMRGNTVKIYQANV--VEQSGEAGTVLTSD-KNGI 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CGK+ + + ELQ KK ++ +F+NG
Sbjct: 272 VVACGKHALSIGELQPQGKKPMAINDFLNG 301
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L NSEH IV + ++PD +GRG KL S VK AL+H + +
Sbjct: 5 LRIIFAGTPDFAARHLQALINSEHQIVGVYSQPDRPAGRGKKLKASEVKALALEHDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK + + L+ + DIMIV+ ILP
Sbjct: 65 QPQSLKTDDALEE--------LSSLNADIMIVVAYGLILP 96
>gi|30249918|ref|NP_841988.1| formyl transferase N-terminus:methionyl-tRNA formyltransferase
[Nitrosomonas europaea ATCC 19718]
gi|33516851|sp|Q820J7.1|FMT_NITEU RecName: Full=Methionyl-tRNA formyltransferase
gi|30180955|emb|CAD85882.1| Formyl transferase N-terminus:Methionyl-tRNA formyltransferase
[Nitrosomonas europaea ATCC 19718]
Length = 324
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 137/316 (43%), Gaps = 83/316 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AA L+ L + +IVL LT+PD +GRGMK+ SPVK A ++ I ++
Sbjct: 1 MRIIFAGTPDFAARALEELQKAGLDIVLTLTQPDRPAGRGMKMQASPVKILAQQYDIPLL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP +LK +++ L + D+MIV +LPE
Sbjct: 61 QPETLK--------SSDIQAQLATFKPDVMIVAAYGLLLPEAVLRIPRHGCINIHASLLP 112
Query: 99 ---------------DT----SLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIG 139
DT S+ N+ +L+ ++ YD T +++G
Sbjct: 113 RWRGAAPIQRALLEGDTETGISIMQMNQGLDTGAVLLKRSLPIEPYDTTATLHDKLADLG 172
Query: 140 E----------SYAPLIKKNEAVLDWSLSAKT---------------IMRKINAFNPFPG 174
LI + + +D +AK I R I F+P PG
Sbjct: 173 GKCIVEALTLLDQGRLISEPQNEVDACYAAKIRKIEAEIDWTCDAAYIDRMIRTFDPHPG 232
Query: 175 AKTYYISYQNKKKFLKIWKAHALS---IESTKKPGTILNVNFHNGILVVCGKNVIKLLEL 231
A T+ + +K+W+A +S S+ + G I+ V+ +GI+V CG++ + + L
Sbjct: 233 AFTHL-----QGNTIKLWQARIVSHVNHNSSHQAGKIITVD-PDGIVVACGRDALSIDIL 286
Query: 232 QKNNKKKISATEFING 247
QK KK++A +F+ G
Sbjct: 287 QKAGGKKLTAAQFLAG 302
>gi|240138196|ref|YP_002962668.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Methylobacterium extorquens AM1]
gi|418059747|ref|ZP_12697686.1| methionyl-tRNA formyltransferase [Methylobacterium extorquens DSM
13060]
gi|240008165|gb|ACS39391.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Methylobacterium extorquens AM1]
gi|373566689|gb|EHP92679.1| methionyl-tRNA formyltransferase [Methylobacterium extorquens DSM
13060]
Length = 309
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 113/307 (36%), Gaps = 66/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A LD L+ H I + T+ +GRGM L SPV A + ++
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHTIAAVYTRAPARAGRGMALKLSPVHARAEALGLPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGI--LPEDTSLTLQNKL---------- 108
P +LK A ++ + + +++ I LP L L L
Sbjct: 61 TPTTLKSEEAAETFAGHGSEVAVVVAYGMLLPQRILDLPRFGCLNLHGSLLPRWRGAAPI 120
Query: 109 ------------------------------------EKLSKILIIDTIKKIEYDMTKLFF 132
E ++ + D + + D+
Sbjct: 121 QRAVMAGDAESGVGVMRMEAGLDTGPVAMEARVPISEGMNAGELHDALMPLGADLMGRAI 180
Query: 133 KPQSNIGESYAPL----------IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+ G ++ P I EA +DWS A + R IN +PFPGA Y+
Sbjct: 181 RALERDGLTFTPQAEAGVVYAHKITNEEARIDWSRPAAEVARHINGLSPFPGA---YVEA 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI-SA 241
K ++ A++ E + PGT+L+ V CG ++LLEL++ K S
Sbjct: 238 DLGKGLERVKVLRAVTAEGSGAPGTLLDAAG----TVACGTGAVRLLELRRAGKGGTASG 293
Query: 242 TEFINGC 248
EF+ G
Sbjct: 294 EEFLRGA 300
>gi|85705031|ref|ZP_01036131.1| methionyl-tRNA formyltransferase [Roseovarius sp. 217]
gi|85670353|gb|EAQ25214.1| methionyl-tRNA formyltransferase [Roseovarius sp. 217]
Length = 302
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 126/309 (40%), Gaps = 79/309 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKY--------- 51
M++IF GT + +L+ L + H + + +P +GRG K SPV+
Sbjct: 1 MRVIFMGTPDFSVPVLEALVAAGHEVAAVYCQPPRPAGRGKKDRPSPVQARAEALGLPVR 60
Query: 52 ---------------ALKHSIKII-------------QPISLKLNGKYH-------KIAN 76
ALK + ++ P LN H + A
Sbjct: 61 HPVSLKGAEAQAEFAALKADVAVVVAYGLILPQAVLDAPARGCLN--IHASLLPRWRGAA 118
Query: 77 ETHK--LLNKIEFDIMIV----------------MGILPEDTSLTLQNKLEKLSKILIID 118
H+ + +E I I+ M I P++T+ L ++L L LII+
Sbjct: 119 PIHRAIMAGDVETGICIMQMEAGLDTGPVLLRGAMTIGPQETTGELHDRLSGLGARLIIE 178
Query: 119 TIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+ +++ D+ + PQS G +YA I K+EA ++W+ A I R I +PFPGA +
Sbjct: 179 ALGRLD-DLRPV---PQSEAGVTYAAKIDKSEARVEWTRPAAEIDRLIRGLSPFPGA--W 232
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ K L + E PG +L+ +G+ V CG ++LL LQ+ +
Sbjct: 233 CEVGGERIKLL-----CSTVAEGQGAPGVVLD----DGLTVACGTGAVRLLRLQRAGRAA 283
Query: 239 ISATEFING 247
A EF+ G
Sbjct: 284 QDADEFLRG 292
>gi|416272756|ref|ZP_11643239.1| Methionyl-tRNA formyltransferase [Shigella dysenteriae CDC 74-1112]
gi|420382503|ref|ZP_14881938.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 225-75]
gi|320173932|gb|EFW49108.1| Methionyl-tRNA formyltransferase [Shigella dysenteriae CDC 74-1112]
gi|391298650|gb|EIQ56650.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 225-75]
Length = 315
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + +++ +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP------MSWLEIERQPVKVWKASVIDTATNAAPGTILEAN- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 270 KQGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|302389591|ref|YP_003825412.1| methionyl-tRNA formyltransferase [Thermosediminibacter oceani DSM
16646]
gi|302200219|gb|ADL07789.1| methionyl-tRNA formyltransferase [Thermosediminibacter oceani DSM
16646]
Length = 313
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 7/155 (4%)
Query: 97 PEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWS 156
PE TS+ L L +L L+++T+ KI+ L PQ++ +YAP+++K + +DW
Sbjct: 157 PEWTSVELSEVLARLGGELLVETLDKIKS--KNLIRIPQNHAEATYAPMLRKEDGRIDWR 214
Query: 157 LSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNG 216
+ I I P+PGA T + +KIW A SI+ PG IL ++ G
Sbjct: 215 SKTEDIYNLIRGVQPWPGAYTVRSGVE-----VKIWGAKIHSIDRKGDPGKILGIDKTRG 269
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFINGCIKN 251
ILV G ++ + ELQ+ ++++ ATEF+ G + N
Sbjct: 270 ILVGTGDGILMITELQEAGRRRMKATEFLVGHVLN 304
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L+ L HN+ ++T+PD GR PVK A KH I++
Sbjct: 1 MKIVFMGTPEFALPSLNALVERGHNVTAVVTQPDRPKGRKRIPTPPPVKLMAQKHGIRVY 60
Query: 61 QPISLK 66
QP +K
Sbjct: 61 QPEKVK 66
>gi|153855355|ref|ZP_01996504.1| hypothetical protein DORLON_02518 [Dorea longicatena DSM 13814]
gi|149752175|gb|EDM62106.1| methionyl-tRNA formyltransferase [Dorea longicatena DSM 13814]
Length = 322
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 72/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
MK+IF GT + L+ L + H +VL +T+PD GRG K+ F
Sbjct: 7 MKVIFMGTPDFSVGTLEALIEAGHEVVLAVTQPDKPKGRGGKMQYTPVKEAALAHGIPVF 66
Query: 46 SPVK-----------KY-------------------------------ALKHSIKIIQPI 63
PVK KY +L S + PI
Sbjct: 67 QPVKIREAQAVEELRKYNADIMVVIAFGQILPKEILEMTPYGCINVHASLLPSYRGAAPI 126
Query: 64 SLK-LNGKYHKIANETHKLLNK-IEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIID 118
+NG K++ T +N+ ++ MI+ +P ++T +L +KL K L ++
Sbjct: 127 QWAVING--DKVSGVTTMQMNEGLDTGDMIMKTEVPLAEDETGGSLHDKLAKAGAKLCVE 184
Query: 119 TIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
T+K +E D T + + Q +YA ++ K +DWS SAK I I NP+P A T
Sbjct: 185 TLKALE-DKTATW-ETQGESPTAYAKMLDKKLGDIDWSKSAKAIECLIRGLNPWPSAYTD 242
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ K +KIW+A L + PGTI+ V +G V G ++K+L LQ KK+
Sbjct: 243 W-----NGKVMKIWEAKVLDENTDATPGTIVKVE-KDGFSVQTGDGLLKVLVLQIPGKKR 296
Query: 239 ISATEFING 247
+ A F+ G
Sbjct: 297 MEADAFLRG 305
>gi|210622389|ref|ZP_03293142.1| hypothetical protein CLOHIR_01090 [Clostridium hiranonis DSM 13275]
gi|210154271|gb|EEA85277.1| hypothetical protein CLOHIR_01090 [Clostridium hiranonis DSM 13275]
Length = 309
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 136/305 (44%), Gaps = 64/305 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH----- 55
MK++F GT A L L + +H+I+ ++T+PD GRG KL PVK+ A++H
Sbjct: 1 MKVVFMGTPDIAVPCLQKLIDEKHDILAVVTQPDKPKGRGKKLAMPPVKELAVEHDIPVY 60
Query: 56 ------------SIKIIQP--------------------------ISLKLNGKYHKIANE 77
+IK I P + + L KY A
Sbjct: 61 QPVRARDEEFVQTIKEINPDLIVVVAFGQILPKEILEVPKFGCVNVHVSLLPKYRGAAPI 120
Query: 78 THKLLNKIEFDIMIVM----GILPEDTSLTLQNKLE------KLSKILIID--TIKKIEY 125
++N E + M G+ D LT + KL+ +L I++++ + K
Sbjct: 121 NWVIINGEEKTGVTTMYMDEGLDTGDMILTREFKLDDQITAGELHDIMMVEGAEVLKETV 180
Query: 126 DMTKLFFKP--QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
D+ P Q N E +YAP + K +D+S +++ I + NP+P A Y
Sbjct: 181 DLIAEGKAPRIQQNHAEFTYAPTMDKELGHVDFSKTSREIHNLVRGVNPWPSAYAIY--- 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
N+ K +KIWK L+ S K+PGTIL + GI V G VI + E+Q NKK++ +
Sbjct: 238 -NEGK-MKIWKTEVLNETSNKEPGTILGTD-KMGIKVSTGDGVILIKEMQMPNKKRMPVS 294
Query: 243 EFING 247
E+I G
Sbjct: 295 EYIKG 299
>gi|90422326|ref|YP_530696.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
BisB18]
gi|123089810|sp|Q21B59.1|FMT_RHOPB RecName: Full=Methionyl-tRNA formyltransferase
gi|90104340|gb|ABD86377.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
BisB18]
Length = 310
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 69/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IF GT A L TL + H IV + ++ SGRGMKL +PV + A + I ++
Sbjct: 3 LRLIFMGTPDFAVPTLRTLAAAGHQIVAVYSREAKPSGRGMKLQPTPVAQEAERLGIPVL 62
Query: 61 --------------------------------QPI-------SLKLNG----KYHKIANE 77
QPI L+G ++ A
Sbjct: 63 TPKTLRTPEAAAEFAAFQADAAVVVAYGMILPQPILDAPTFGCFNLHGSLLPRWRGAAPI 122
Query: 78 THKLL-NKIEFDIMIV---MGILPEDTSLT-------------LQNKLEKLSKILIIDTI 120
++ E +M++ +G+ D +LT L + L L L+++ +
Sbjct: 123 NRAIMAGDPEAGVMVMKMDIGLDTGDVALTGRIALTDAMTASDLHDALAPLGAELMVEAM 182
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++E +L F Q G +YA I K EA +DW+ A ++R I+ +PFPGA +
Sbjct: 183 AQLERG--ELTFTKQPEQGVTYAAKIDKAEARIDWAKPAHAVLRHIHGLSPFPGAWC-EL 239
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ + +KI + + + +PGT+L+ + + + CG I++L+LQ+ K+ +
Sbjct: 240 PIEGEAVRVKILRCEL--AKGSGEPGTLLD----DRLAIACGDGAIRILQLQRAGKQPMQ 293
Query: 241 ATEFING 247
A +F+ G
Sbjct: 294 AQDFLRG 300
>gi|258626113|ref|ZP_05720964.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM603]
gi|258581639|gb|EEW06537.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM603]
Length = 315
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K + E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SEESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A +K+++A+ ++W+ A I R I AFNP+P
Sbjct: 177 PQALLECLEDIVQGTAVAVKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+ + T+ PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQVRVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|383786966|ref|YP_005471535.1| methionyl-tRNA formyltransferase [Fervidobacterium pennivorans DSM
9078]
gi|383109813|gb|AFG35416.1| methionyl-tRNA formyltransferase [Fervidobacterium pennivorans DSM
9078]
Length = 319
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 134/300 (44%), Gaps = 56/300 (18%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+F GT AA+ L+ L +N+V ++++ D GRG KL +PVK+ ALK++I +
Sbjct: 10 LRILFLGTPEFAASYLEFLLEKGYNVVAVISQADKPRGRGQKLLPTPVKEVALKYNIPVF 69
Query: 61 QPISLKLNG-----KYHK---IANETHKLLNKIEFDIM----IVMGILPE-DTSLTLQNK 107
QP SL G KY I +LL K D + + +LP+ + +Q
Sbjct: 70 QPKSLVREGPQILEKYKPDIGIVVAYGRLLKKPFLDAIPFYNVHASLLPKYRGAAPMQRC 129
Query: 108 LEKLSKILIIDTIKKIEYDM------------------------------TKL---FFK- 133
LE K+ + TI KI M T+L F K
Sbjct: 130 LEAGEKVTGV-TIFKISEGMDDGDIALQKAFEISECETLGELYEKMIIHGTELLDEFLKR 188
Query: 134 ------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKK 187
PQ + SYAP I KN+ +D+S+ A+ + KI A++P PG K + K
Sbjct: 189 YPVPLVPQDHSQASYAPKIDKNDLHVDFSMPAEMVRNKIRAYDPVPGVKARL--NNTEVK 246
Query: 188 FLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ ST KPGTI++++ G L+ CGK + + +Q K KI + NG
Sbjct: 247 LFAACEIEQNDKHSTYKPGTIISIDKSKGGLIACGKGALWIKYIQFPGKNKIGFGDAKNG 306
>gi|416811983|ref|ZP_11890204.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
3256-97]
gi|419122539|ref|ZP_13667481.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5B]
gi|320655926|gb|EFX23846.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|377962607|gb|EHV26059.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5B]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWVEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|269797909|ref|YP_003311809.1| methionyl-tRNA formyltransferase [Veillonella parvula DSM 2008]
gi|269094538|gb|ACZ24529.1| methionyl-tRNA formyltransferase [Veillonella parvula DSM 2008]
Length = 336
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 133/332 (40%), Gaps = 100/332 (30%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+F GT + L+ L + H+IV + +PD GRG ++ PVK AL+H + +
Sbjct: 7 LRIVFMGTPDFSVPTLEALIQAGHSIVGVYCQPDKQKGRGKQVQMPPVKVAALEHDLPVY 66
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP++L+ + L ++ D++IV+ ILP
Sbjct: 67 QPVTLR--------DEQVRAELEALQPDVVIVIAYGKILPPWLIRLPQYGCINVHASILP 118
Query: 98 ----------------EDTSLTLQNKLEKLSKILIIDTIKK--IEYDMTKLFFKPQSNI- 138
T +T+ + + L IID ++ + + T F+ + +
Sbjct: 119 SYRGAAPIHYAILNGDSKTGVTIMHMDDGLDTGDIIDIVETDILPGETTGQLFERIAVLG 178
Query: 139 GESYAPL------------------------IKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
GE+ P+ I K +DWS A I I NP PG
Sbjct: 179 GETIVPVLTRWVNGEIVATPQDDTMATHTTKITKEMGQIDWSKPANEIANLIRGLNPAPG 238
Query: 175 AKTYYISYQNKKKFLKIWKA--------HAL----------SIESTKKPGTILNVNFHNG 216
TY K LK+W H L +I +T PGTI V+ G
Sbjct: 239 CYTYL-----DGKRLKVWSGEVVPSDTTHCLIDVHGKHVPIAISATTVPGTI--VSKIAG 291
Query: 217 ILVVCGK-NVIKLLELQKNNKKKISATEFING 247
+ V CG N+I L E+Q NKK+ISA +FING
Sbjct: 292 LGVFCGDGNIILLTEVQPENKKRISAIDFING 323
>gi|15803815|ref|NP_289849.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EDL933]
gi|15833407|ref|NP_312180.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|168758515|ref|ZP_02783522.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|168764970|ref|ZP_02789977.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|168769149|ref|ZP_02794156.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|168777855|ref|ZP_02802862.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|168783854|ref|ZP_02808861.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|168786177|ref|ZP_02811184.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|168802717|ref|ZP_02827724.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|195939835|ref|ZP_03085217.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4024]
gi|208807557|ref|ZP_03249894.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208812388|ref|ZP_03253717.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208818701|ref|ZP_03259021.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209397164|ref|YP_002272744.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|217324530|ref|ZP_03440614.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254795224|ref|YP_003080061.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|261224592|ref|ZP_05938873.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254514|ref|ZP_05947047.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
FRIK966]
gi|291284646|ref|YP_003501464.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|331654880|ref|ZP_08355879.1| methionyl-tRNA formyltransferase [Escherichia coli M718]
gi|387508679|ref|YP_006160935.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|387884457|ref|YP_006314759.1| methionyl-tRNA formyltransferase [Escherichia coli Xuzhou21]
gi|416311801|ref|ZP_11657198.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
1044]
gi|416320322|ref|ZP_11662874.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC1212]
gi|416326432|ref|ZP_11666641.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
1125]
gi|416777935|ref|ZP_11875507.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
G5101]
gi|416789219|ref|ZP_11880350.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H- str.
493-89]
gi|416801082|ref|ZP_11885255.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H- str. H
2687]
gi|416822288|ref|ZP_11894724.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str. USDA
5905]
gi|416832658|ref|ZP_11899821.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
LSU-61]
gi|419047403|ref|ZP_13594335.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3A]
gi|419053054|ref|ZP_13599921.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3B]
gi|419060198|ref|ZP_13606989.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3C]
gi|419064553|ref|ZP_13611273.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3D]
gi|419072616|ref|ZP_13618206.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3E]
gi|419072793|ref|ZP_13618375.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3F]
gi|419084001|ref|ZP_13629428.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4A]
gi|419088359|ref|ZP_13633710.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4B]
gi|419095245|ref|ZP_13640515.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4C]
gi|419100164|ref|ZP_13645354.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4D]
gi|419105902|ref|ZP_13651026.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4E]
gi|419112056|ref|ZP_13657102.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4F]
gi|419116823|ref|ZP_13661834.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5A]
gi|419127997|ref|ZP_13672871.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5C]
gi|419133391|ref|ZP_13678218.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5D]
gi|419138549|ref|ZP_13683339.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5E]
gi|420271958|ref|ZP_14774309.1| methionyl-tRNA formyltransferase [Escherichia coli PA22]
gi|420277323|ref|ZP_14779603.1| methionyl-tRNA formyltransferase [Escherichia coli PA40]
gi|420282791|ref|ZP_14785023.1| methionyl-tRNA formyltransferase [Escherichia coli TW06591]
gi|420288945|ref|ZP_14791127.1| methionyl-tRNA formyltransferase [Escherichia coli TW10246]
gi|420294431|ref|ZP_14796543.1| methionyl-tRNA formyltransferase [Escherichia coli TW11039]
gi|420300286|ref|ZP_14802329.1| methionyl-tRNA formyltransferase [Escherichia coli TW09109]
gi|420306666|ref|ZP_14808654.1| methionyl-tRNA formyltransferase [Escherichia coli TW10119]
gi|420311720|ref|ZP_14813648.1| methionyl-tRNA formyltransferase [Escherichia coli EC1738]
gi|420317270|ref|ZP_14819142.1| methionyl-tRNA formyltransferase [Escherichia coli EC1734]
gi|421815694|ref|ZP_16251351.1| methionyl-tRNA formyltransferase [Escherichia coli 8.0416]
gi|421820820|ref|ZP_16256299.1| methionyl-tRNA formyltransferase [Escherichia coli 10.0821]
gi|421826124|ref|ZP_16261477.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK920]
gi|421832874|ref|ZP_16268154.1| methionyl-tRNA formyltransferase [Escherichia coli PA7]
gi|423727242|ref|ZP_17701153.1| methionyl-tRNA formyltransferase [Escherichia coli PA31]
gi|424079444|ref|ZP_17816411.1| methionyl-tRNA formyltransferase [Escherichia coli FDA505]
gi|424085900|ref|ZP_17822386.1| methionyl-tRNA formyltransferase [Escherichia coli FDA517]
gi|424092299|ref|ZP_17828228.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1996]
gi|424098972|ref|ZP_17834247.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1985]
gi|424105184|ref|ZP_17839926.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1990]
gi|424111832|ref|ZP_17846061.1| methionyl-tRNA formyltransferase [Escherichia coli 93-001]
gi|424117772|ref|ZP_17851604.1| methionyl-tRNA formyltransferase [Escherichia coli PA3]
gi|424123958|ref|ZP_17857264.1| methionyl-tRNA formyltransferase [Escherichia coli PA5]
gi|424130108|ref|ZP_17863010.1| methionyl-tRNA formyltransferase [Escherichia coli PA9]
gi|424136430|ref|ZP_17868877.1| methionyl-tRNA formyltransferase [Escherichia coli PA10]
gi|424142983|ref|ZP_17874849.1| methionyl-tRNA formyltransferase [Escherichia coli PA14]
gi|424149385|ref|ZP_17880755.1| methionyl-tRNA formyltransferase [Escherichia coli PA15]
gi|424155233|ref|ZP_17886164.1| methionyl-tRNA formyltransferase [Escherichia coli PA24]
gi|424254405|ref|ZP_17891711.1| methionyl-tRNA formyltransferase [Escherichia coli PA25]
gi|424332907|ref|ZP_17897617.1| methionyl-tRNA formyltransferase [Escherichia coli PA28]
gi|424451671|ref|ZP_17903339.1| methionyl-tRNA formyltransferase [Escherichia coli PA32]
gi|424457859|ref|ZP_17908968.1| methionyl-tRNA formyltransferase [Escherichia coli PA33]
gi|424464321|ref|ZP_17914692.1| methionyl-tRNA formyltransferase [Escherichia coli PA39]
gi|424470621|ref|ZP_17920432.1| methionyl-tRNA formyltransferase [Escherichia coli PA41]
gi|424477127|ref|ZP_17926439.1| methionyl-tRNA formyltransferase [Escherichia coli PA42]
gi|424482887|ref|ZP_17931862.1| methionyl-tRNA formyltransferase [Escherichia coli TW07945]
gi|424489067|ref|ZP_17937612.1| methionyl-tRNA formyltransferase [Escherichia coli TW09098]
gi|424495732|ref|ZP_17943343.1| methionyl-tRNA formyltransferase [Escherichia coli TW09195]
gi|424502421|ref|ZP_17949306.1| methionyl-tRNA formyltransferase [Escherichia coli EC4203]
gi|424508673|ref|ZP_17955054.1| methionyl-tRNA formyltransferase [Escherichia coli EC4196]
gi|424516027|ref|ZP_17960659.1| methionyl-tRNA formyltransferase [Escherichia coli TW14313]
gi|424522225|ref|ZP_17966336.1| methionyl-tRNA formyltransferase [Escherichia coli TW14301]
gi|424528101|ref|ZP_17971812.1| methionyl-tRNA formyltransferase [Escherichia coli EC4421]
gi|424534249|ref|ZP_17977592.1| methionyl-tRNA formyltransferase [Escherichia coli EC4422]
gi|424540302|ref|ZP_17983241.1| methionyl-tRNA formyltransferase [Escherichia coli EC4013]
gi|424546433|ref|ZP_17988799.1| methionyl-tRNA formyltransferase [Escherichia coli EC4402]
gi|424552655|ref|ZP_17994494.1| methionyl-tRNA formyltransferase [Escherichia coli EC4439]
gi|424558840|ref|ZP_18000245.1| methionyl-tRNA formyltransferase [Escherichia coli EC4436]
gi|424565180|ref|ZP_18006178.1| methionyl-tRNA formyltransferase [Escherichia coli EC4437]
gi|424571310|ref|ZP_18011853.1| methionyl-tRNA formyltransferase [Escherichia coli EC4448]
gi|424577465|ref|ZP_18017513.1| methionyl-tRNA formyltransferase [Escherichia coli EC1845]
gi|424583284|ref|ZP_18022926.1| methionyl-tRNA formyltransferase [Escherichia coli EC1863]
gi|425099958|ref|ZP_18502686.1| methionyl-tRNA formyltransferase [Escherichia coli 3.4870]
gi|425106055|ref|ZP_18508367.1| methionyl-tRNA formyltransferase [Escherichia coli 5.2239]
gi|425112066|ref|ZP_18513982.1| methionyl-tRNA formyltransferase [Escherichia coli 6.0172]
gi|425127990|ref|ZP_18529153.1| methionyl-tRNA formyltransferase [Escherichia coli 8.0586]
gi|425133734|ref|ZP_18534579.1| methionyl-tRNA formyltransferase [Escherichia coli 8.2524]
gi|425140310|ref|ZP_18540686.1| methionyl-tRNA formyltransferase [Escherichia coli 10.0833]
gi|425146018|ref|ZP_18546006.1| methionyl-tRNA formyltransferase [Escherichia coli 10.0869]
gi|425152137|ref|ZP_18551747.1| methionyl-tRNA formyltransferase [Escherichia coli 88.0221]
gi|425158011|ref|ZP_18557270.1| methionyl-tRNA formyltransferase [Escherichia coli PA34]
gi|425164360|ref|ZP_18563242.1| methionyl-tRNA formyltransferase [Escherichia coli FDA506]
gi|425170104|ref|ZP_18568572.1| methionyl-tRNA formyltransferase [Escherichia coli FDA507]
gi|425176163|ref|ZP_18574278.1| methionyl-tRNA formyltransferase [Escherichia coli FDA504]
gi|425182207|ref|ZP_18579897.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1999]
gi|425188473|ref|ZP_18585741.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1997]
gi|425195240|ref|ZP_18592005.1| methionyl-tRNA formyltransferase [Escherichia coli NE1487]
gi|425201715|ref|ZP_18597917.1| methionyl-tRNA formyltransferase [Escherichia coli NE037]
gi|425208100|ref|ZP_18603892.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK2001]
gi|425213855|ref|ZP_18609250.1| methionyl-tRNA formyltransferase [Escherichia coli PA4]
gi|425219977|ref|ZP_18614935.1| methionyl-tRNA formyltransferase [Escherichia coli PA23]
gi|425226525|ref|ZP_18620987.1| methionyl-tRNA formyltransferase [Escherichia coli PA49]
gi|425232782|ref|ZP_18626817.1| methionyl-tRNA formyltransferase [Escherichia coli PA45]
gi|425238705|ref|ZP_18632420.1| methionyl-tRNA formyltransferase [Escherichia coli TT12B]
gi|425244943|ref|ZP_18638244.1| methionyl-tRNA formyltransferase [Escherichia coli MA6]
gi|425251131|ref|ZP_18644069.1| methionyl-tRNA formyltransferase [Escherichia coli 5905]
gi|425256918|ref|ZP_18649425.1| methionyl-tRNA formyltransferase [Escherichia coli CB7326]
gi|425263170|ref|ZP_18655166.1| methionyl-tRNA formyltransferase [Escherichia coli EC96038]
gi|425269169|ref|ZP_18660794.1| methionyl-tRNA formyltransferase [Escherichia coli 5412]
gi|425296623|ref|ZP_18686786.1| methionyl-tRNA formyltransferase [Escherichia coli PA38]
gi|425313314|ref|ZP_18702488.1| methionyl-tRNA formyltransferase [Escherichia coli EC1735]
gi|425319291|ref|ZP_18708074.1| methionyl-tRNA formyltransferase [Escherichia coli EC1736]
gi|425325390|ref|ZP_18713741.1| methionyl-tRNA formyltransferase [Escherichia coli EC1737]
gi|425331758|ref|ZP_18719589.1| methionyl-tRNA formyltransferase [Escherichia coli EC1846]
gi|425337935|ref|ZP_18725286.1| methionyl-tRNA formyltransferase [Escherichia coli EC1847]
gi|425344248|ref|ZP_18731133.1| methionyl-tRNA formyltransferase [Escherichia coli EC1848]
gi|425350050|ref|ZP_18736512.1| methionyl-tRNA formyltransferase [Escherichia coli EC1849]
gi|425356355|ref|ZP_18742417.1| methionyl-tRNA formyltransferase [Escherichia coli EC1850]
gi|425362316|ref|ZP_18747958.1| methionyl-tRNA formyltransferase [Escherichia coli EC1856]
gi|425368533|ref|ZP_18753651.1| methionyl-tRNA formyltransferase [Escherichia coli EC1862]
gi|425374849|ref|ZP_18759486.1| methionyl-tRNA formyltransferase [Escherichia coli EC1864]
gi|425387737|ref|ZP_18771291.1| methionyl-tRNA formyltransferase [Escherichia coli EC1866]
gi|425394389|ref|ZP_18777493.1| methionyl-tRNA formyltransferase [Escherichia coli EC1868]
gi|425400529|ref|ZP_18783229.1| methionyl-tRNA formyltransferase [Escherichia coli EC1869]
gi|425406618|ref|ZP_18788835.1| methionyl-tRNA formyltransferase [Escherichia coli EC1870]
gi|425413004|ref|ZP_18794762.1| methionyl-tRNA formyltransferase [Escherichia coli NE098]
gi|425419317|ref|ZP_18800581.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK523]
gi|425430591|ref|ZP_18811195.1| methionyl-tRNA formyltransferase [Escherichia coli 0.1304]
gi|428949023|ref|ZP_19021294.1| methionyl-tRNA formyltransferase [Escherichia coli 88.1467]
gi|428955097|ref|ZP_19026887.1| methionyl-tRNA formyltransferase [Escherichia coli 88.1042]
gi|428961085|ref|ZP_19032374.1| methionyl-tRNA formyltransferase [Escherichia coli 89.0511]
gi|428967704|ref|ZP_19038411.1| methionyl-tRNA formyltransferase [Escherichia coli 90.0091]
gi|428973480|ref|ZP_19043801.1| methionyl-tRNA formyltransferase [Escherichia coli 90.0039]
gi|428979903|ref|ZP_19049718.1| methionyl-tRNA formyltransferase [Escherichia coli 90.2281]
gi|428985680|ref|ZP_19055067.1| methionyl-tRNA formyltransferase [Escherichia coli 93.0055]
gi|428991816|ref|ZP_19060799.1| methionyl-tRNA formyltransferase [Escherichia coli 93.0056]
gi|428997703|ref|ZP_19066292.1| methionyl-tRNA formyltransferase [Escherichia coli 94.0618]
gi|429003979|ref|ZP_19072072.1| methionyl-tRNA formyltransferase [Escherichia coli 95.0183]
gi|429010078|ref|ZP_19077528.1| methionyl-tRNA formyltransferase [Escherichia coli 95.1288]
gi|429016593|ref|ZP_19083470.1| methionyl-tRNA formyltransferase [Escherichia coli 95.0943]
gi|429022422|ref|ZP_19088937.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0428]
gi|429028494|ref|ZP_19094482.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0427]
gi|429034667|ref|ZP_19100184.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0939]
gi|429040753|ref|ZP_19105848.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0932]
gi|429046610|ref|ZP_19111317.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0107]
gi|429052800|ref|ZP_19117353.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0003]
gi|429057484|ref|ZP_19121763.1| methionyl-tRNA formyltransferase [Escherichia coli 97.1742]
gi|429062974|ref|ZP_19126958.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0007]
gi|429069209|ref|ZP_19132660.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0672]
gi|429075882|ref|ZP_19139120.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0678]
gi|429080918|ref|ZP_19144042.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0713]
gi|429828393|ref|ZP_19359410.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0109]
gi|429834829|ref|ZP_19365127.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0010]
gi|444926907|ref|ZP_21246180.1| methionyl-tRNA formyltransferase [Escherichia coli 09BKT078844]
gi|444933350|ref|ZP_21252343.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0814]
gi|444939296|ref|ZP_21257992.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0815]
gi|444944310|ref|ZP_21262783.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0816]
gi|444949080|ref|ZP_21267379.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0839]
gi|444954739|ref|ZP_21272814.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0848]
gi|444960929|ref|ZP_21278736.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1753]
gi|444961609|ref|ZP_21279381.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1775]
gi|444972212|ref|ZP_21289537.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1793]
gi|444976629|ref|ZP_21293727.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1805]
gi|444982702|ref|ZP_21299597.1| methionyl-tRNA formyltransferase [Escherichia coli ATCC 700728]
gi|444987511|ref|ZP_21304283.1| methionyl-tRNA formyltransferase [Escherichia coli PA11]
gi|444992727|ref|ZP_21309365.1| methionyl-tRNA formyltransferase [Escherichia coli PA19]
gi|444994079|ref|ZP_21310695.1| methionyl-tRNA formyltransferase [Escherichia coli PA13]
gi|445004353|ref|ZP_21320728.1| methionyl-tRNA formyltransferase [Escherichia coli PA2]
gi|445009502|ref|ZP_21325723.1| methionyl-tRNA formyltransferase [Escherichia coli PA47]
gi|445015554|ref|ZP_21331631.1| methionyl-tRNA formyltransferase [Escherichia coli PA48]
gi|445015778|ref|ZP_21331841.1| methionyl-tRNA formyltransferase [Escherichia coli PA8]
gi|445025998|ref|ZP_21341810.1| methionyl-tRNA formyltransferase [Escherichia coli 7.1982]
gi|445030850|ref|ZP_21346514.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1781]
gi|445036877|ref|ZP_21352393.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1762]
gi|445042682|ref|ZP_21358040.1| methionyl-tRNA formyltransferase [Escherichia coli PA35]
gi|445047160|ref|ZP_21362404.1| methionyl-tRNA formyltransferase [Escherichia coli 3.4880]
gi|445052686|ref|ZP_21367706.1| methionyl-tRNA formyltransferase [Escherichia coli 95.0083]
gi|445054023|ref|ZP_21368992.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0670]
gi|452971241|ref|ZP_21969468.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4009]
gi|21542040|sp|Q8X8F1.3|FMT_ECO57 RecName: Full=Methionyl-tRNA formyltransferase
gi|238065950|sp|B5YT07.1|FMT_ECO5E RecName: Full=Methionyl-tRNA formyltransferase
gi|12517917|gb|AAG58409.1|AE005556_2 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
EDL933]
gi|13363626|dbj|BAB37576.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|187767010|gb|EDU30854.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|188998872|gb|EDU67858.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|189354684|gb|EDU73103.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|189361852|gb|EDU80271.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|189365130|gb|EDU83546.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|189374012|gb|EDU92428.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|189375352|gb|EDU93768.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|208727358|gb|EDZ76959.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208733665|gb|EDZ82352.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208738824|gb|EDZ86506.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209158564|gb|ACI35997.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|209757348|gb|ACI76986.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|209757350|gb|ACI76987.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|209757352|gb|ACI76988.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|209757354|gb|ACI76989.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|209757356|gb|ACI76990.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|217320751|gb|EEC29175.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254594624|gb|ACT73985.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|290764519|gb|ADD58480.1| Methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|320191678|gb|EFW66328.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC1212]
gi|320639592|gb|EFX09186.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
G5101]
gi|320645090|gb|EFX14106.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H- str.
493-89]
gi|320650401|gb|EFX18867.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H- str. H
2687]
gi|320661378|gb|EFX28793.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str. USDA
5905]
gi|320666400|gb|EFX33383.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
LSU-61]
gi|326342536|gb|EGD66310.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
1044]
gi|326344523|gb|EGD68272.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
1125]
gi|331046895|gb|EGI18973.1| methionyl-tRNA formyltransferase [Escherichia coli M718]
gi|374360673|gb|AEZ42380.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|377890111|gb|EHU54569.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3A]
gi|377891901|gb|EHU56353.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3B]
gi|377900282|gb|EHU64616.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3C]
gi|377905440|gb|EHU69709.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3E]
gi|377907051|gb|EHU71287.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3D]
gi|377920555|gb|EHU84572.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4A]
gi|377927421|gb|EHU91336.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4B]
gi|377934569|gb|EHU98397.1| methionyl-tRNA formyltransferase [Escherichia coli DEC3F]
gi|377937054|gb|EHV00842.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4C]
gi|377938823|gb|EHV02586.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4D]
gi|377945405|gb|EHV09100.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4E]
gi|377953417|gb|EHV16995.1| methionyl-tRNA formyltransferase [Escherichia coli DEC4F]
gi|377958170|gb|EHV21690.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5A]
gi|377970735|gb|EHV34093.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5C]
gi|377972114|gb|EHV35464.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5D]
gi|377980673|gb|EHV43933.1| methionyl-tRNA formyltransferase [Escherichia coli DEC5E]
gi|386797915|gb|AFJ30949.1| methionyl-tRNA formyltransferase [Escherichia coli Xuzhou21]
gi|390638794|gb|EIN18288.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1996]
gi|390640467|gb|EIN19925.1| methionyl-tRNA formyltransferase [Escherichia coli FDA517]
gi|390640657|gb|EIN20108.1| methionyl-tRNA formyltransferase [Escherichia coli FDA505]
gi|390658122|gb|EIN35924.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1985]
gi|390658181|gb|EIN35981.1| methionyl-tRNA formyltransferase [Escherichia coli 93-001]
gi|390661208|gb|EIN38870.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1990]
gi|390675242|gb|EIN51399.1| methionyl-tRNA formyltransferase [Escherichia coli PA3]
gi|390678572|gb|EIN54523.1| methionyl-tRNA formyltransferase [Escherichia coli PA5]
gi|390682204|gb|EIN57980.1| methionyl-tRNA formyltransferase [Escherichia coli PA9]
gi|390693636|gb|EIN68255.1| methionyl-tRNA formyltransferase [Escherichia coli PA10]
gi|390698116|gb|EIN72505.1| methionyl-tRNA formyltransferase [Escherichia coli PA14]
gi|390698804|gb|EIN73177.1| methionyl-tRNA formyltransferase [Escherichia coli PA15]
gi|390712416|gb|EIN85373.1| methionyl-tRNA formyltransferase [Escherichia coli PA22]
gi|390719334|gb|EIN92060.1| methionyl-tRNA formyltransferase [Escherichia coli PA25]
gi|390721283|gb|EIN93983.1| methionyl-tRNA formyltransferase [Escherichia coli PA24]
gi|390725360|gb|EIN97869.1| methionyl-tRNA formyltransferase [Escherichia coli PA28]
gi|390738853|gb|EIO10050.1| methionyl-tRNA formyltransferase [Escherichia coli PA31]
gi|390739593|gb|EIO10761.1| methionyl-tRNA formyltransferase [Escherichia coli PA32]
gi|390742864|gb|EIO13853.1| methionyl-tRNA formyltransferase [Escherichia coli PA33]
gi|390756198|gb|EIO25709.1| methionyl-tRNA formyltransferase [Escherichia coli PA40]
gi|390763565|gb|EIO32806.1| methionyl-tRNA formyltransferase [Escherichia coli PA39]
gi|390764768|gb|EIO33965.1| methionyl-tRNA formyltransferase [Escherichia coli PA41]
gi|390766364|gb|EIO35488.1| methionyl-tRNA formyltransferase [Escherichia coli PA42]
gi|390779582|gb|EIO47296.1| methionyl-tRNA formyltransferase [Escherichia coli TW06591]
gi|390787366|gb|EIO54856.1| methionyl-tRNA formyltransferase [Escherichia coli TW07945]
gi|390787897|gb|EIO55370.1| methionyl-tRNA formyltransferase [Escherichia coli TW10246]
gi|390794063|gb|EIO61364.1| methionyl-tRNA formyltransferase [Escherichia coli TW11039]
gi|390802352|gb|EIO69392.1| methionyl-tRNA formyltransferase [Escherichia coli TW09098]
gi|390804657|gb|EIO71605.1| methionyl-tRNA formyltransferase [Escherichia coli TW09109]
gi|390814381|gb|EIO80961.1| methionyl-tRNA formyltransferase [Escherichia coli TW10119]
gi|390823730|gb|EIO89761.1| methionyl-tRNA formyltransferase [Escherichia coli EC4203]
gi|390825632|gb|EIO91549.1| methionyl-tRNA formyltransferase [Escherichia coli TW09195]
gi|390828631|gb|EIO94282.1| methionyl-tRNA formyltransferase [Escherichia coli EC4196]
gi|390843120|gb|EIP06938.1| methionyl-tRNA formyltransferase [Escherichia coli TW14313]
gi|390843958|gb|EIP07725.1| methionyl-tRNA formyltransferase [Escherichia coli TW14301]
gi|390848663|gb|EIP12123.1| methionyl-tRNA formyltransferase [Escherichia coli EC4421]
gi|390859096|gb|EIP21456.1| methionyl-tRNA formyltransferase [Escherichia coli EC4422]
gi|390863494|gb|EIP25628.1| methionyl-tRNA formyltransferase [Escherichia coli EC4013]
gi|390868101|gb|EIP29864.1| methionyl-tRNA formyltransferase [Escherichia coli EC4402]
gi|390876219|gb|EIP37207.1| methionyl-tRNA formyltransferase [Escherichia coli EC4439]
gi|390881597|gb|EIP42172.1| methionyl-tRNA formyltransferase [Escherichia coli EC4436]
gi|390891454|gb|EIP51084.1| methionyl-tRNA formyltransferase [Escherichia coli EC4437]
gi|390893495|gb|EIP53046.1| methionyl-tRNA formyltransferase [Escherichia coli EC4448]
gi|390898273|gb|EIP57546.1| methionyl-tRNA formyltransferase [Escherichia coli EC1738]
gi|390906481|gb|EIP65372.1| methionyl-tRNA formyltransferase [Escherichia coli EC1734]
gi|390916800|gb|EIP75241.1| methionyl-tRNA formyltransferase [Escherichia coli EC1863]
gi|390917543|gb|EIP75961.1| methionyl-tRNA formyltransferase [Escherichia coli EC1845]
gi|408062130|gb|EKG96636.1| methionyl-tRNA formyltransferase [Escherichia coli PA7]
gi|408064508|gb|EKG98989.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK920]
gi|408067591|gb|EKH02024.1| methionyl-tRNA formyltransferase [Escherichia coli PA34]
gi|408077492|gb|EKH11696.1| methionyl-tRNA formyltransferase [Escherichia coli FDA506]
gi|408080967|gb|EKH15006.1| methionyl-tRNA formyltransferase [Escherichia coli FDA507]
gi|408089451|gb|EKH22761.1| methionyl-tRNA formyltransferase [Escherichia coli FDA504]
gi|408095534|gb|EKH28503.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1999]
gi|408101935|gb|EKH34353.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK1997]
gi|408106541|gb|EKH38639.1| methionyl-tRNA formyltransferase [Escherichia coli NE1487]
gi|408113327|gb|EKH44927.1| methionyl-tRNA formyltransferase [Escherichia coli NE037]
gi|408119504|gb|EKH50570.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK2001]
gi|408125661|gb|EKH56257.1| methionyl-tRNA formyltransferase [Escherichia coli PA4]
gi|408135544|gb|EKH65320.1| methionyl-tRNA formyltransferase [Escherichia coli PA23]
gi|408138321|gb|EKH67996.1| methionyl-tRNA formyltransferase [Escherichia coli PA49]
gi|408144732|gb|EKH73952.1| methionyl-tRNA formyltransferase [Escherichia coli PA45]
gi|408153035|gb|EKH81445.1| methionyl-tRNA formyltransferase [Escherichia coli TT12B]
gi|408158134|gb|EKH86262.1| methionyl-tRNA formyltransferase [Escherichia coli MA6]
gi|408162092|gb|EKH90012.1| methionyl-tRNA formyltransferase [Escherichia coli 5905]
gi|408171398|gb|EKH98517.1| methionyl-tRNA formyltransferase [Escherichia coli CB7326]
gi|408178101|gb|EKI04834.1| methionyl-tRNA formyltransferase [Escherichia coli EC96038]
gi|408181313|gb|EKI07874.1| methionyl-tRNA formyltransferase [Escherichia coli 5412]
gi|408214731|gb|EKI39142.1| methionyl-tRNA formyltransferase [Escherichia coli PA38]
gi|408225011|gb|EKI48707.1| methionyl-tRNA formyltransferase [Escherichia coli EC1735]
gi|408236181|gb|EKI59093.1| methionyl-tRNA formyltransferase [Escherichia coli EC1736]
gi|408239909|gb|EKI62634.1| methionyl-tRNA formyltransferase [Escherichia coli EC1737]
gi|408244485|gb|EKI66914.1| methionyl-tRNA formyltransferase [Escherichia coli EC1846]
gi|408253260|gb|EKI74864.1| methionyl-tRNA formyltransferase [Escherichia coli EC1847]
gi|408257111|gb|EKI78455.1| methionyl-tRNA formyltransferase [Escherichia coli EC1848]
gi|408263721|gb|EKI84555.1| methionyl-tRNA formyltransferase [Escherichia coli EC1849]
gi|408272284|gb|EKI92383.1| methionyl-tRNA formyltransferase [Escherichia coli EC1850]
gi|408275194|gb|EKI95168.1| methionyl-tRNA formyltransferase [Escherichia coli EC1856]
gi|408283571|gb|EKJ02728.1| methionyl-tRNA formyltransferase [Escherichia coli EC1862]
gi|408289403|gb|EKJ08164.1| methionyl-tRNA formyltransferase [Escherichia coli EC1864]
gi|408305282|gb|EKJ22681.1| methionyl-tRNA formyltransferase [Escherichia coli EC1868]
gi|408305967|gb|EKJ23347.1| methionyl-tRNA formyltransferase [Escherichia coli EC1866]
gi|408316874|gb|EKJ33127.1| methionyl-tRNA formyltransferase [Escherichia coli EC1869]
gi|408322435|gb|EKJ38421.1| methionyl-tRNA formyltransferase [Escherichia coli EC1870]
gi|408324761|gb|EKJ40686.1| methionyl-tRNA formyltransferase [Escherichia coli NE098]
gi|408334844|gb|EKJ49714.1| methionyl-tRNA formyltransferase [Escherichia coli FRIK523]
gi|408344273|gb|EKJ58648.1| methionyl-tRNA formyltransferase [Escherichia coli 0.1304]
gi|408546784|gb|EKK24191.1| methionyl-tRNA formyltransferase [Escherichia coli 5.2239]
gi|408546912|gb|EKK24313.1| methionyl-tRNA formyltransferase [Escherichia coli 3.4870]
gi|408547903|gb|EKK25289.1| methionyl-tRNA formyltransferase [Escherichia coli 6.0172]
gi|408565192|gb|EKK41280.1| methionyl-tRNA formyltransferase [Escherichia coli 8.0586]
gi|408576816|gb|EKK52401.1| methionyl-tRNA formyltransferase [Escherichia coli 10.0833]
gi|408579449|gb|EKK54909.1| methionyl-tRNA formyltransferase [Escherichia coli 8.2524]
gi|408589319|gb|EKK63840.1| methionyl-tRNA formyltransferase [Escherichia coli 10.0869]
gi|408594903|gb|EKK69176.1| methionyl-tRNA formyltransferase [Escherichia coli 88.0221]
gi|408597148|gb|EKK71221.1| methionyl-tRNA formyltransferase [Escherichia coli 8.0416]
gi|408608299|gb|EKK81698.1| methionyl-tRNA formyltransferase [Escherichia coli 10.0821]
gi|427202338|gb|EKV72670.1| methionyl-tRNA formyltransferase [Escherichia coli 88.1042]
gi|427203575|gb|EKV73878.1| methionyl-tRNA formyltransferase [Escherichia coli 89.0511]
gi|427206249|gb|EKV76466.1| methionyl-tRNA formyltransferase [Escherichia coli 88.1467]
gi|427218769|gb|EKV87756.1| methionyl-tRNA formyltransferase [Escherichia coli 90.0091]
gi|427222344|gb|EKV91134.1| methionyl-tRNA formyltransferase [Escherichia coli 90.2281]
gi|427225584|gb|EKV94215.1| methionyl-tRNA formyltransferase [Escherichia coli 90.0039]
gi|427239379|gb|EKW06863.1| methionyl-tRNA formyltransferase [Escherichia coli 93.0056]
gi|427239786|gb|EKW07260.1| methionyl-tRNA formyltransferase [Escherichia coli 93.0055]
gi|427243823|gb|EKW11178.1| methionyl-tRNA formyltransferase [Escherichia coli 94.0618]
gi|427258160|gb|EKW24262.1| methionyl-tRNA formyltransferase [Escherichia coli 95.0183]
gi|427259192|gb|EKW25256.1| methionyl-tRNA formyltransferase [Escherichia coli 95.0943]
gi|427261501|gb|EKW27432.1| methionyl-tRNA formyltransferase [Escherichia coli 95.1288]
gi|427274448|gb|EKW39100.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0428]
gi|427277109|gb|EKW41658.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0427]
gi|427281437|gb|EKW45754.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0939]
gi|427289863|gb|EKW53369.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0932]
gi|427296629|gb|EKW59678.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0107]
gi|427297081|gb|EKW60122.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0003]
gi|427309475|gb|EKW71792.1| methionyl-tRNA formyltransferase [Escherichia coli 97.1742]
gi|427312719|gb|EKW74869.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0007]
gi|427317154|gb|EKW79064.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0672]
gi|427324537|gb|EKW86009.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0678]
gi|427326267|gb|EKW87690.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0713]
gi|429251852|gb|EKY36420.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0109]
gi|429253127|gb|EKY37621.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0010]
gi|444534740|gb|ELV14936.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0814]
gi|444537597|gb|ELV17515.1| methionyl-tRNA formyltransferase [Escherichia coli 09BKT078844]
gi|444544263|gb|ELV23339.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0815]
gi|444554302|gb|ELV31877.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0816]
gi|444555493|gb|ELV32956.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0839]
gi|444560772|gb|ELV37915.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0848]
gi|444568579|gb|ELV45248.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1753]
gi|444575311|gb|ELV51555.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1793]
gi|444586470|gb|ELV61973.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1775]
gi|444589115|gb|ELV64465.1| methionyl-tRNA formyltransferase [Escherichia coli ATCC 700728]
gi|444590602|gb|ELV65912.1| methionyl-tRNA formyltransferase [Escherichia coli PA11]
gi|444591594|gb|ELV66877.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1805]
gi|444605006|gb|ELV79662.1| methionyl-tRNA formyltransferase [Escherichia coli PA19]
gi|444611922|gb|ELV86239.1| methionyl-tRNA formyltransferase [Escherichia coli PA2]
gi|444616801|gb|ELV90950.1| methionyl-tRNA formyltransferase [Escherichia coli PA13]
gi|444618218|gb|ELV92309.1| methionyl-tRNA formyltransferase [Escherichia coli PA48]
gi|444619210|gb|ELV93261.1| methionyl-tRNA formyltransferase [Escherichia coli PA47]
gi|444635156|gb|ELW08594.1| methionyl-tRNA formyltransferase [Escherichia coli 7.1982]
gi|444638661|gb|ELW11992.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1781]
gi|444639517|gb|ELW12826.1| methionyl-tRNA formyltransferase [Escherichia coli PA8]
gi|444642085|gb|ELW15295.1| methionyl-tRNA formyltransferase [Escherichia coli 99.1762]
gi|444651047|gb|ELW23857.1| methionyl-tRNA formyltransferase [Escherichia coli PA35]
gi|444657796|gb|ELW30262.1| methionyl-tRNA formyltransferase [Escherichia coli 3.4880]
gi|444660866|gb|ELW33211.1| methionyl-tRNA formyltransferase [Escherichia coli 95.0083]
gi|444675313|gb|ELW46767.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0670]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWVEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|293416706|ref|ZP_06659343.1| methionyl-tRNA formyltransferase [Escherichia coli B185]
gi|417627051|ref|ZP_12277302.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_MHI813]
gi|432451519|ref|ZP_19693776.1| methionyl-tRNA formyltransferase [Escherichia coli KTE193]
gi|433035167|ref|ZP_20222865.1| methionyl-tRNA formyltransferase [Escherichia coli KTE112]
gi|291431282|gb|EFF04267.1| methionyl-tRNA formyltransferase [Escherichia coli B185]
gi|345378761|gb|EGX10681.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_MHI813]
gi|430977948|gb|ELC94771.1| methionyl-tRNA formyltransferase [Escherichia coli KTE193]
gi|431547559|gb|ELI21856.1| methionyl-tRNA formyltransferase [Escherichia coli KTE112]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWVEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|326319404|ref|YP_004237076.1| methionyl-tRNA formyltransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376240|gb|ADX48509.1| methionyl-tRNA formyltransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 329
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +T+ TL ++L +L LI++ ++ L PQ G +YA I+K E+ +D
Sbjct: 163 IAARETTATLHDRLAELGGRLIVEAMELAACG--GLPATPQPAEGVTYAHKIEKAESAID 220
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALS--IESTKKPGTILNVN 212
W LSA I R++ AF+PFPGA T Q + +K+W L +PG IL V+
Sbjct: 221 WKLSAAAIDRRVRAFDPFPGAST-----QCGAETIKVWGCEPLQAVAPDGARPGEILQVD 275
Query: 213 FHNGILVVCG-----KNVIKLLELQKNNKKKISATEFING 247
G+ V CG V++L LQ+ K++ +F+ G
Sbjct: 276 -EAGVAVACGGPGAADGVLRLTVLQRAGGKRLPVGDFLRG 314
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL H + +
Sbjct: 1 MKIIFAGTPEFARVALERLLAAGAEVPLVLTQPDRPAGRGMKLQASPVKQCALAHGVAVA 60
Query: 61 QPISLKLNGKY 71
QP L+L+GKY
Sbjct: 61 QPRGLRLDGKY 71
>gi|417134050|ref|ZP_11978835.1| methionyl-tRNA formyltransferase [Escherichia coli 5.0588]
gi|386151904|gb|EIH03193.1| methionyl-tRNA formyltransferase [Escherichia coli 5.0588]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I+T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLINTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|422836855|ref|ZP_16884889.1| methionyl-tRNA formyltransferase [Escherichia coli E101]
gi|371606969|gb|EHN95554.1| methionyl-tRNA formyltransferase [Escherichia coli E101]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWVEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|218529892|ref|YP_002420708.1| methionyl-tRNA formyltransferase [Methylobacterium extorquens CM4]
gi|218522195|gb|ACK82780.1| methionyl-tRNA formyltransferase [Methylobacterium extorquens CM4]
Length = 309
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 115/307 (37%), Gaps = 66/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A LD L+ H I + T+ +GRGM L SPV A + ++
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHTIAAVYTRAPARAGRGMALKLSPVHARAEALGLPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGI--LPEDTSLTLQNKL---------- 108
P +LK A ++ + + +++ I LP L L L
Sbjct: 61 TPTTLKSEEAAETFAGHGSEVAVVVAYGMLLPQRILDLPRFGCLNLHGSLLPRWRGAAPI 120
Query: 109 ------------------------------------EKLSKILIIDTIKKIEYDMTKLFF 132
E ++ + D + + D+
Sbjct: 121 QRAVMAGDAESGVGVMRMEAGLDTGPVAMEARVPISEGMNAGELHDALMPLGADLMGRAI 180
Query: 133 KPQSNIGESYAPL----------IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+ G ++ P I +EA +DWS A + R IN +PFPGA Y+
Sbjct: 181 RALERDGLTFTPQAEAGVVYAHKITNDEARIDWSRPAAEVARHINGLSPFPGA---YVEA 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISAT 242
K ++ A++ E + PGT+L+ V CG ++LLEL++ K ++
Sbjct: 238 DLGKGLERVKVLRAVTAEGSGAPGTLLDAAG----TVACGTGAVRLLELRRAGKGGTASG 293
Query: 243 E-FINGC 248
E F+ G
Sbjct: 294 EAFLRGA 300
>gi|347538124|ref|YP_004845548.1| methionyl-tRNA formyltransferase [Pseudogulbenkiania sp. NH8B]
gi|345641301|dbj|BAK75134.1| methionyl-tRNA formyltransferase [Pseudogulbenkiania sp. NH8B]
Length = 306
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 21/183 (11%)
Query: 74 IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIE 124
+A ++ + ++ D+ + G I ++T+ TL ++L + I+DT+ ++
Sbjct: 125 LAGDSETGITIMQMDVGLDTGAMLSVHPLPIAADETAATLHDRLAEAGARAIVDTLARL- 183
Query: 125 YDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
D +P+ + +YA + K EA +DWS A I R I A+NP PGA T
Sbjct: 184 -DEINPVAQPEEGV--TYAQKLSKAEAEVDWSQPATDIARAIRAYNPVPGAFTRLAG--- 237
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+ LK+W A A E +PGT+L+ + +G+ V G V++L +LQ K+++A +F
Sbjct: 238 --EPLKLWLASAE--EGRGEPGTVLSADA-DGVCVAAGSGVVRLTQLQAAGGKRLAARDF 292
Query: 245 ING 247
+ G
Sbjct: 293 VAG 295
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L L ++ H+I L+LT+PD +GRGMKL SPVK AL+H +++
Sbjct: 1 MKLIFAGTPEFAAAALQALLDAGHDIPLVLTQPDRPAGRGMKLKPSPVKALALQHGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP++LK E L+ ++ ++M+V
Sbjct: 61 QPLTLK--------TPEAQALIAEVGAEVMVV 84
>gi|410471043|ref|YP_006894324.1| methionyl-tRNA formyltransferase [Bordetella parapertussis Bpp5]
gi|408441153|emb|CCJ47576.1| methionyl-tRNA formyltransferase [Bordetella parapertussis Bpp5]
Length = 312
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD L + H++ L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAGRGLKLTSSPVKQAALAAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A L ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAAARAQLERVAPDVMVVAAYGLILPQ 101
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+ T+ L ++L + I+D + + L + Q + G +YA + K EA LD SL
Sbjct: 166 QQTAAQLHDELARAGGQAIVDALAAL--GQGGLAPRRQPDAGVTYAAKLDKAEAALDCSL 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP PGA + +K+W+A AL + PG +L + GI
Sbjct: 224 PAAVLARRVRAFNPVPGATIRLPGLDDP---VKVWRAQALEQAAGGPPGAVLRADAQ-GI 279
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V++LLELQK K+ F+ G
Sbjct: 280 DIATGQGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|417839632|ref|ZP_12485805.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M19107]
gi|341951998|gb|EGT78541.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M19107]
Length = 318
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--GKFIAEEQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDW+L A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 DSQSNYAEKLSKEEAQLDWTLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|418356635|ref|ZP_12959351.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-61A1]
gi|424611808|ref|ZP_18050635.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-41A1]
gi|424620447|ref|ZP_18058994.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-47A1]
gi|424655150|ref|ZP_18092467.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-81A2]
gi|443529008|ref|ZP_21095031.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-7A1]
gi|356450807|gb|EHI03517.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-61A1]
gi|395977468|gb|EJH86877.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-47A1]
gi|408018598|gb|EKG56036.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-41A1]
gi|408058399|gb|EKG93202.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-81A2]
gi|443460271|gb|ELT27659.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-7A1]
Length = 296
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 68/292 (23%)
Query: 16 LDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKI- 74
+ L +SEH I+ + T+P+ +GRG KL SPVK AL+H++ + QP + K + ++
Sbjct: 1 MAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDESKQQLA 60
Query: 75 --------------------------------------------------ANETHKLLNK 84
A ++ +
Sbjct: 61 ALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDSETGVTI 120
Query: 85 IEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQ 135
++ D+ M+ + LP DTS ++ +KL +L +++ ++ I T + K
Sbjct: 121 MQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQG-TAVAVKQD 179
Query: 136 SNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH 195
+ +YA + K EA ++WS +A I R I AFNP+P + ++ + +K+W+A
Sbjct: 180 DGLA-NYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSH-----FEVAENSIKVWQAR 233
Query: 196 ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ T+ PGTI+ + +GI V G++V+ L LQ KK + + +N
Sbjct: 234 VETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIPGKKALPVQDILNA 284
>gi|424779925|ref|ZP_18206811.1| Methionyl-tRNA formyltransferase [Catellicoccus marimammalium
M35/04/3]
gi|422843464|gb|EKU27901.1| Methionyl-tRNA formyltransferase [Catellicoccus marimammalium
M35/04/3]
Length = 313
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 68/312 (21%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KIIF GT + IL+ L ++++ ++T+PD GR L SPVK+ AL H + I Q
Sbjct: 3 KIIFMGTPQFSVPILEGLIEKGYDVIGVVTQPDRPKGRKKVLTPSPVKEAALAHHLPIWQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + +I + L+ F + +L P ++ + L
Sbjct: 63 PEKISGSKEMEEIIAQKPDLIITAAFGQFLPERLLEAPTYGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEYDMTKLFFKPQ-----SNIGE----------------- 140
E+ + + I+ +KK+ D + + + SN+GE
Sbjct: 123 YAIMEGEEKTGVTIMQMVKKM--DAGDILSQAEITIGDSNVGEMFERLSLLGRDLLLDTL 180
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+Y+P I + + +DW AK + ++ NPFP A T
Sbjct: 181 PLYLEGKITPQPQNEEEATYSPNITREQEKMDWHRPAKELAYQVQGMNPFPVAHTT---- 236
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISA 241
+ + KIW A A + K PGTIL + G+ V CGK V+ + ELQ K K+
Sbjct: 237 -KEGQRWKIWAAKAQDKTTDKAPGTILAIA-KEGLEVACGKGTVLAITELQPAGKSKMDI 294
Query: 242 TEFINGCIKNIK 253
F+NG +N++
Sbjct: 295 QSFVNGMGRNMQ 306
>gi|417715255|ref|ZP_12364199.1| methionyl-tRNA formyltransferase [Shigella flexneri K-272]
gi|417719192|ref|ZP_12368081.1| methionyl-tRNA formyltransferase [Shigella flexneri K-227]
gi|332996760|gb|EGK16385.1| methionyl-tRNA formyltransferase [Shigella flexneri K-272]
gi|333014515|gb|EGK33863.1| methionyl-tRNA formyltransferase [Shigella flexneri K-227]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWPMSR-----LEIEGQPVKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEEGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|157692253|ref|YP_001486715.1| methionyl-tRNA formyltransferase [Bacillus pumilus SAFR-032]
gi|166988362|sp|A8FD38.1|FMT_BACP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|157681011|gb|ABV62155.1| methionyl-tRNA formyltransferase [Bacillus pumilus SAFR-032]
Length = 317
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 69/308 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK ALKH I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLQTLITEGYEVVGVVTQPDRPKGRKRVLTPPPVKVEALKHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANE--------------THKLLNKIEFDIMIV-MGILPE-------- 98
P ++L+ + K+ +LL++ +F + V +LPE
Sbjct: 63 PEKVRLDEEIDKVLALKPDLIVTAAFGQILPKRLLDEPQFGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL----------------FFK- 133
T +T+ +E+L D I K+E ++ +L K
Sbjct: 123 YAILQGKKKTGVTIMYMVERLDAG---DMISKVEVEIDELDNVGTLHDKLSVAGAALLKD 179
Query: 134 -------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
PQ+ +YAP IK+ + LDW+ + + + ++ NP+P A T +
Sbjct: 180 TVPNVLSGSISPIPQNEDAATYAPNIKREQERLDWTKTGEELYNQVRGLNPWPVAYTEW- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
LK+W+A + +E ++ G ++ + ++ K + L +Q KKK+S
Sbjct: 239 ----NGAHLKVWEAKKVPLEVQEEAGKVIELQKEGPVIGTGNKQGLLLTGVQPAGKKKMS 294
Query: 241 ATEFINGC 248
+F+ G
Sbjct: 295 GEDFLRGA 302
>gi|412340461|ref|YP_006969216.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica 253]
gi|408770295|emb|CCJ55086.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica 253]
Length = 312
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD L + H++ L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAGRGLKLTPSPVKQAALAAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A L ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAAARAQLERVAPDVMVVAAYGLILPQ 101
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+ T+ L ++L + I+D + + L + Q + G +YA + K EA LD SL
Sbjct: 166 QQTAAQLHDELARAGGQAIVDALAAL--GQGGLAPRRQPDAGVTYAAKLDKAEAALDCSL 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP PGA + +K+W+A AL + PG +L + GI
Sbjct: 224 PAAVLARRVRAFNPVPGATIRLPGLDDP---VKVWRAQALEQAAGGPPGAVLRADAQ-GI 279
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V++LLELQK K+ F+ G
Sbjct: 280 DIATGQGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|168752264|ref|ZP_02777286.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|188013844|gb|EDU51966.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4113]
Length = 320
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWVEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|330827127|ref|YP_004390430.1| methionyl-tRNA formyltransferase [Alicycliphilus denitrificans
K601]
gi|329312499|gb|AEB86914.1| Methionyl-tRNA formyltransferase [Alicycliphilus denitrificans
K601]
Length = 323
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 88 DIMIV--MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPL 145
D+++V I P DT+ TL ++L ++ LI+ ++ L PQ G SYA
Sbjct: 154 DMLLVEKTAIAPMDTTATLHDRLAQIGGRLIVQALEL--AGRGGLEATPQPAEGVSYAHK 211
Query: 146 IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-- 203
I+K E+ +DWSL A+ I R++ AF PFPGA T +K+W + I+S K
Sbjct: 212 IEKAESQIDWSLPAEAIARRVRAFAPFPGAATRL-----GADAIKVW---SCEIDSCKHF 263
Query: 204 --KP-GTILNVNFHNGILVVCGK-NVIKLLELQKNNKKKISATEFING 247
KP G IL+++ GI V CG +V++L LQ+ K++ A +F+ G
Sbjct: 264 PDKPCGQILHID-DAGIAVACGAGSVLRLTVLQRAGGKRLPAADFLRG 310
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL+H +
Sbjct: 1 MKVIFAGTPEFARVALEHLLAAGLTVPLVLTQPDRPAGRGMKLQASPVKQCALEHGTAVA 60
Query: 61 QPISLKLNGKY 71
QP SL+L+GKY
Sbjct: 61 QPRSLRLDGKY 71
>gi|340000947|ref|YP_004731831.1| methionyl-tRNA formyltransferase [Salmonella bongori NCTC 12419]
gi|339514309|emb|CCC32072.1| methionyl-tRNA formyltransferase [Salmonella bongori NCTC 12419]
Length = 315
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDTS +L NKL +L +I+T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITPEDTSGSLYNKLAELGPQGLIETLKQLADGTVKPEVQDEALV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS+SA + R I AFNP+P +I + +K+W A + +PGTIL+
Sbjct: 217 WSMSAAQLERCIRAFNPWP---MSWIEIDGQP--VKVWGASVIDSACQAEPGTILDAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGNGILNLLSLQPAGKKAMSAQDLLN 302
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + I
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLAIF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPASLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|229134674|ref|ZP_04263483.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST196]
gi|228648720|gb|EEL04746.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST196]
Length = 314
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVV 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + ++DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLAG- 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
+ +K+W +SI +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 241 ----QVIKVWWGEKVSITEKTEPGTIVALE-EDGFVVATGNETGVKITELQPSGKKRMSC 295
Query: 242 TEFINGCIKNI 252
++F+ G I
Sbjct: 296 SQFLRGTKPEI 306
>gi|163941604|ref|YP_001646488.1| methionyl-tRNA formyltransferase [Bacillus weihenstephanensis
KBAB4]
gi|229013050|ref|ZP_04170215.1| Methionyl-tRNA formyltransferase [Bacillus mycoides DSM 2048]
gi|229168606|ref|ZP_04296329.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH621]
gi|423367910|ref|ZP_17345342.1| methionyl-tRNA formyltransferase [Bacillus cereus VD142]
gi|423489042|ref|ZP_17465724.1| methionyl-tRNA formyltransferase [Bacillus cereus BtB2-4]
gi|423494767|ref|ZP_17471411.1| methionyl-tRNA formyltransferase [Bacillus cereus CER057]
gi|423498441|ref|ZP_17475058.1| methionyl-tRNA formyltransferase [Bacillus cereus CER074]
gi|423511900|ref|ZP_17488431.1| methionyl-tRNA formyltransferase [Bacillus cereus HuA2-1]
gi|423518556|ref|ZP_17495037.1| methionyl-tRNA formyltransferase [Bacillus cereus HuA2-4]
gi|423592138|ref|ZP_17568169.1| methionyl-tRNA formyltransferase [Bacillus cereus VD048]
gi|423598823|ref|ZP_17574823.1| methionyl-tRNA formyltransferase [Bacillus cereus VD078]
gi|423669440|ref|ZP_17644469.1| methionyl-tRNA formyltransferase [Bacillus cereus VDM034]
gi|423674381|ref|ZP_17649320.1| methionyl-tRNA formyltransferase [Bacillus cereus VDM062]
gi|229487438|sp|A9VTA4.1|FMT_BACWK RecName: Full=Methionyl-tRNA formyltransferase
gi|163863801|gb|ABY44860.1| methionyl-tRNA formyltransferase [Bacillus weihenstephanensis
KBAB4]
gi|228615012|gb|EEK72114.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH621]
gi|228748304|gb|EEL98164.1| Methionyl-tRNA formyltransferase [Bacillus mycoides DSM 2048]
gi|401082771|gb|EJP91036.1| methionyl-tRNA formyltransferase [Bacillus cereus VD142]
gi|401150860|gb|EJQ58312.1| methionyl-tRNA formyltransferase [Bacillus cereus CER057]
gi|401160490|gb|EJQ67868.1| methionyl-tRNA formyltransferase [Bacillus cereus CER074]
gi|401160764|gb|EJQ68139.1| methionyl-tRNA formyltransferase [Bacillus cereus HuA2-4]
gi|401232271|gb|EJR38773.1| methionyl-tRNA formyltransferase [Bacillus cereus VD048]
gi|401237093|gb|EJR43550.1| methionyl-tRNA formyltransferase [Bacillus cereus VD078]
gi|401298567|gb|EJS04167.1| methionyl-tRNA formyltransferase [Bacillus cereus VDM034]
gi|401309932|gb|EJS15265.1| methionyl-tRNA formyltransferase [Bacillus cereus VDM062]
gi|402432290|gb|EJV64349.1| methionyl-tRNA formyltransferase [Bacillus cereus BtB2-4]
gi|402450161|gb|EJV81995.1| methionyl-tRNA formyltransferase [Bacillus cereus HuA2-1]
Length = 314
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVV 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + ++DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLAG- 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
+ +K+W +SI +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 241 ----QVIKVWWGEKVSITEKAEPGTIVALE-EDGFVVATGNETGVKITELQPSGKKRMSC 295
Query: 242 TEFINGCIKNI 252
++F+ G I
Sbjct: 296 SQFLRGTKPEI 306
>gi|423661294|ref|ZP_17636463.1| methionyl-tRNA formyltransferase [Bacillus cereus VDM022]
gi|401301335|gb|EJS06924.1| methionyl-tRNA formyltransferase [Bacillus cereus VDM022]
Length = 314
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVV 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKMV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + ++DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLAG- 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
+ +K+W +SI +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 241 ----QVIKVWWGEKVSITEKAEPGTIVALE-EDGFVVATGNETGVKITELQPSGKKRMSC 295
Query: 242 TEFINGCIKNI 252
++F+ G I
Sbjct: 296 SQFLRGTKPEI 306
>gi|393775077|ref|ZP_10363391.1| methionyl-tRNA formyltransferase [Ralstonia sp. PBA]
gi|392717654|gb|EIZ05214.1| methionyl-tRNA formyltransferase [Ralstonia sp. PBA]
Length = 327
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P T+ L + L L +I+ ++K+E + L PQ G +YA I K+EA LD
Sbjct: 166 IAPGVTTAVLHDTLAVLGAEMIVSALRKLESEGV-LTGTPQPEDGVTYAAKIGKDEARLD 224
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
A + R+I AFNPFPGA + +K+W+ A + PGT+L +
Sbjct: 225 LRRPAAILARQIWAFNPFPGAVVEFDGVA-----VKLWQGEA--VAGKGAPGTVLQADAQ 277
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G+++ CG+ +++ ELQK K++ A F+ G
Sbjct: 278 -GLVIACGEGALRVTELQKPGGKRLPAQAFLQG 309
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A A L ++ + IV +LT+PD +GRGM+L SPVK+YA +H + I
Sbjct: 3 LRVAFAGTPEFARAALAAIHAAGFPIVAVLTQPDRPAGRGMQLQASPVKQYAAQHGLGPI 62
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
+QP SL+L GKY + A L D+M+V
Sbjct: 63 LQPRSLRLQGKYPEDAATAMDALRAAAPDVMVV 95
>gi|124485019|ref|YP_001029635.1| methionyl-tRNA formyltransferase [Methanocorpusculum labreanum Z]
gi|124362560|gb|ABN06368.1| methionyl-tRNA formyltransferase [Methanocorpusculum labreanum Z]
Length = 309
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 67/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS---- 56
M+++F GT A + L ++ ++H IV ILT+ D + RG ++ FSPVK++AL+H
Sbjct: 1 MRVLFMGTPEYALSSLRAVF-AKHEIVGILTRADKPNRRGNRIEFSPVKQFALEHGIPVF 59
Query: 57 -------------IKIIQPI----------------------SLKLNG----KYHKIANE 77
+K + P ++ L+G KY A
Sbjct: 60 QPENMKDPALLEELKALSPDISVVVAYGMMIPDAILELPKHNTINLHGSLLPKYRGAAPM 119
Query: 78 THKLLN---KIEFDIMIVMGIL-----------PEDTSLT---LQNKLEKLSKILIIDTI 120
+ +LN + IM V L P D + + + + L +L +I+ +
Sbjct: 120 QYSVLNGDSETGVSIMYVTARLDAGDVIHAKSIPLDENASYGEVHDLLAELGAEALIEAL 179
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E + PQ ++AP I K E V+DW+L A + +I +P PGA T
Sbjct: 180 DLLES--GRAVRIPQDETKVTFAPSISKEECVIDWTLPATVVHNRIRGLSPIPGANTRL- 236
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K LKI+KA +S + + +PG +++V G +V+ G + +L + K+++
Sbjct: 237 ---PDGKLLKIYKAEKVSGDYSGEPGMVVDVIKKKGPVVMTGDGAVCILSAKPEGKREMP 293
Query: 241 ATEFING 247
E +NG
Sbjct: 294 GFEIVNG 300
>gi|74313806|ref|YP_312225.1| methionyl-tRNA formyltransferase [Shigella sonnei Ss046]
gi|383180461|ref|YP_005458466.1| methionyl-tRNA formyltransferase [Shigella sonnei 53G]
gi|414578068|ref|ZP_11435240.1| methionyl-tRNA formyltransferase [Shigella sonnei 3233-85]
gi|415851175|ref|ZP_11527924.1| methionyl-tRNA formyltransferase [Shigella sonnei 53G]
gi|417127085|ref|ZP_11974576.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0246]
gi|418268754|ref|ZP_12887423.1| methionyl-tRNA formyltransferase [Shigella sonnei str. Moseley]
gi|420360637|ref|ZP_14861591.1| methionyl-tRNA formyltransferase [Shigella sonnei 3226-85]
gi|420365343|ref|ZP_14866210.1| methionyl-tRNA formyltransferase [Shigella sonnei 4822-66]
gi|123732291|sp|Q3YWX2.1|FMT_SHISS RecName: Full=Methionyl-tRNA formyltransferase
gi|73857283|gb|AAZ89990.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella sonnei Ss046]
gi|323164852|gb|EFZ50643.1| methionyl-tRNA formyltransferase [Shigella sonnei 53G]
gi|386144388|gb|EIG90854.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0246]
gi|391278404|gb|EIQ37111.1| methionyl-tRNA formyltransferase [Shigella sonnei 3226-85]
gi|391282216|gb|EIQ40852.1| methionyl-tRNA formyltransferase [Shigella sonnei 3233-85]
gi|391292372|gb|EIQ50708.1| methionyl-tRNA formyltransferase [Shigella sonnei 4822-66]
gi|397896430|gb|EJL12849.1| methionyl-tRNA formyltransferase [Shigella sonnei str. Moseley]
Length = 315
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E+ +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQESQQLVADLQADVMVVVAYGLILP 96
>gi|424634990|ref|ZP_18073026.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-55A1]
gi|408028787|gb|EKG65649.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-55A1]
Length = 296
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 68/292 (23%)
Query: 16 LDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKI- 74
+ L +SEH I+ + T+PD +GRG KL SPVK AL+H++ + QP + K + ++
Sbjct: 1 MAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDESKQQLA 60
Query: 75 --------------------------------------------------ANETHKLLNK 84
A ++ +
Sbjct: 61 ALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDSETGVTI 120
Query: 85 IEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQ 135
++ D+ M+ + LP DTS ++ +KL +L +++ ++ I T + K
Sbjct: 121 MQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQG-TAVAVKQD 179
Query: 136 SNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH 195
+ +YA + K EA ++WS +A I R I AFNP+P + ++ + +K+W+A
Sbjct: 180 DGLA-NYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSH-----FEVAENSIKVWQAR 233
Query: 196 ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ T+ PGTI+ + +GI V G+ + L LQ KK + + +N
Sbjct: 234 VETQAVTQAPGTIVQAD-KSGIYVATGQGALVLESLQIPGKKALPVQDILNA 284
>gi|387130878|ref|YP_006293768.1| Methionyl-tRNA formyltransferase [Methylophaga sp. JAM7]
gi|386272167|gb|AFJ03081.1| Methionyl-tRNA formyltransferase [Methylophaga sp. JAM7]
Length = 309
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 91/157 (57%), Gaps = 8/157 (5%)
Query: 91 IVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNE 150
+ + I E+T+ TL ++L + L++ T+ + D + Q++ YA + K+E
Sbjct: 151 VTLAIDNEETAQTLHDRLAEAGATLLMQTLATL--DDCQQAATEQADEFSCYAEKLHKSE 208
Query: 151 AVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILN 210
A++DW SA+ I R+I AFNP+P A+T + ++ L+IW+A L+ S+ PGT++
Sbjct: 209 AIIDWHQSAEQIDRQIRAFNPWPVAQTLW-----RESLLRIWRATPLAETSSALPGTLIR 263
Query: 211 VNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ + ++V G+ +++ E+Q+ K+++ ++ +N
Sbjct: 264 IE-RDALIVATGEGCLQITEIQRAGKRRMRISDLLNA 299
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT AA L L SEH IV + T+PD +GRG KL SPVK A +H++ +
Sbjct: 1 MRILFAGTPEFAATTLSALITSEHEIVAVYTQPDRPAGRGRKLTASPVKTLAQQHNLTVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP++L+ K+A+ + ++MIV+ ILP+
Sbjct: 61 QPVTLRNTEAQQKLAD--------YQAEVMIVVAYGLILPQ 93
>gi|33599237|ref|NP_886797.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica RB50]
gi|427812498|ref|ZP_18979562.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica 1289]
gi|39931251|sp|Q7WQS8.1|FMT_BORBR RecName: Full=Methionyl-tRNA formyltransferase
gi|33575283|emb|CAE30746.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica RB50]
gi|410563498|emb|CCN21032.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica 1289]
Length = 312
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD L + H++ L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAGRGLKLTPSPVKQAALAAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A L ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAAARAQLERVAPDVMVVAAYGLILPQ 101
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+ T+ L ++L I+D + + L + Q + G +YA + K EA LD SL
Sbjct: 166 QQTAAQLHDELALAGGQAIVDALAAL--GQGGLAPRRQPDAGVTYAAKLDKAEAALDCSL 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP PGA + +K+W+A AL + PG +L + GI
Sbjct: 224 PAAVLARRVRAFNPVPGATIRLPGLDDP---VKVWRAQALEQAAGGPPGAVLRADAQ-GI 279
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V++LLELQK K+ F+ G
Sbjct: 280 DIATGQGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|333917293|ref|YP_004491025.1| methionyl-tRNA formyltransferase [Delftia sp. Cs1-4]
gi|333747493|gb|AEF92670.1| Methionyl-tRNA formyltransferase [Delftia sp. Cs1-4]
Length = 330
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DT+ +L +KL L LI++ ++ L PQ G +YA I+K E+ +D
Sbjct: 163 ITADDTTASLHDKLADLGGRLIVEALEMSA--CGGLPRTPQPAEGVNYAHKIEKAESQID 220
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH-----ALSIESTKKPGTIL 209
W A+ I R++ AFNPFPG T Y + +K+W+AH + PGT+L
Sbjct: 221 WRQDAEAIARRLRAFNPFPGGATQY-----GDEAIKVWEAHADPADPAVAVAAAAPGTVL 275
Query: 210 NVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ +G+ V CG V+ + LQ+ K+++A +F+ G
Sbjct: 276 SAGA-DGVRVACGHGVLCMTLLQRAGGKRLAAGDFLRG 312
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MRVIFAGTPEFARVALERLLAAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALEHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY + A + + D+M+V ILP+
Sbjct: 61 QPRSLRLDGKYPEEAAAARAAIEAAQADVMVVAAYGLILPQ 101
>gi|187730742|ref|YP_001881971.1| methionyl-tRNA formyltransferase [Shigella boydii CDC 3083-94]
gi|238689491|sp|B2U2Q5.1|FMT_SHIB3 RecName: Full=Methionyl-tRNA formyltransferase
gi|187427734|gb|ACD07008.1| methionyl-tRNA formyltransferase [Shigella boydii CDC 3083-94]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDKTLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + +++ +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP------MSWLEIERQPVKVWKASVIDTATNAAPGTILEAN- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 270 KQGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|344943064|ref|ZP_08782351.1| Methionyl-tRNA formyltransferase [Methylobacter tundripaludum SV96]
gi|344260351|gb|EGW20623.1| Methionyl-tRNA formyltransferase [Methylobacter tundripaludum SV96]
Length = 309
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 133/312 (42%), Gaps = 79/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT A L L +SEH I + T+PD +GRG KL SPVK+ AL I +
Sbjct: 1 MKIIFAGTPEFAVPCLQMLLDSEHEICAVYTQPDRPAGRGRKLQPSPVKELALTAGIPVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL---------- 108
QP+++K + +I+ L+ + + +++ +L P+ + + L
Sbjct: 61 QPLTMKTSEDLQQISAFNADLMVVVAYGMILTQAVLDVPKLGCINVHASLLPRWRGAAPI 120
Query: 109 -------EKLSKILIIDTIKKIEYDMTKLFFKPQSNIGES-----------------YAP 144
++ + + I+ ++K+ D + K + IG + A
Sbjct: 121 QRALMAGDEKTGVTIMQIVRKL--DAGDMLHKEECMIGPTDTAVDLHDKLAVLGAIGLAK 178
Query: 145 LIKKNEA------------------------VLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++K+ EA V+DW+ A I RK+ N +P A+T Y
Sbjct: 179 VLKQIEAGTVHPERQDEALVTYAEKLEKSEAVVDWTQPAMDIARKVRGLNAWPVAQTLY- 237
Query: 181 SYQNKKKFLKIWKAH------ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ L+IW+A +L +ES G + + H + V G ++LLE+Q
Sbjct: 238 ----QGNVLRIWQAEPVEDDVSLQLES----GVVRCADKH--MDVATGAGFLRLLEVQLP 287
Query: 235 NKKKISATEFIN 246
K++ F++
Sbjct: 288 GGKRMPVQAFLS 299
>gi|293412706|ref|ZP_06655374.1| methionyl-tRNA formyltransferase [Escherichia coli B354]
gi|291468353|gb|EFF10846.1| methionyl-tRNA formyltransferase [Escherichia coli B354]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAQLGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|262166813|ref|ZP_06034550.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM223]
gi|262026529|gb|EEY45197.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM223]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 135/313 (43%), Gaps = 80/313 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH I+ + T+PD +GRG KL SPVK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K + E+ + L + D+M+V+ ILP
Sbjct: 65 QPENFK--------SEESKQQLVALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILP 116
Query: 98 E----------------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
+T +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKITTLPIEASDTSASMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I + A IK+++A ++W+ A I R I AFNP+P
Sbjct: 177 PQALLECLEDIAQGTAVAIKQDDAQANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPM 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ ++ + +K+W+A + PGTI+ + +GI V G++V+ L LQ
Sbjct: 237 SH-----FEVAENSIKVWQARVETRAVNDTPGTIIQAD-KSGIYVATGQDVLVLESLQIP 290
Query: 235 NKKKISATEFING 247
KK + + +N
Sbjct: 291 GKKALPVQDILNA 303
>gi|311277758|ref|YP_003939989.1| methionyl-tRNA formyltransferase [Enterobacter cloacae SCF1]
gi|308746953|gb|ADO46705.1| methionyl-tRNA formyltransferase [Enterobacter cloacae SCF1]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DTS TL +KL +L +I T+K++ T+ + +S + +YA + K EA +D
Sbjct: 159 ITAQDTSATLYDKLAELGPQGLIATLKQLAEGATRPEVQDESQV--TYAEKLSKEEARVD 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+LSA I R I AFNP+P ++ + +K+W+A AL +PGTIL+ +
Sbjct: 217 WTLSAAQIERCIRAFNPWP---MSWLEIDGQP--VKVWQAAALPGPVNAEPGTILDAS-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V G ++ L LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGDGILSLQSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ A E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------AQENQQLVAALNADVMVVVAYGLILP 96
>gi|260857408|ref|YP_003231299.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
11368]
gi|260870030|ref|YP_003236432.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O111:H- str. 11128]
gi|415787652|ref|ZP_11494199.1| methionyl-tRNA formyltransferase [Escherichia coli EPECa14]
gi|415820328|ref|ZP_11509517.1| methionyl-tRNA formyltransferase [Escherichia coli OK1180]
gi|417197583|ref|ZP_12016517.1| methionyl-tRNA formyltransferase [Escherichia coli 4.0522]
gi|417210815|ref|ZP_12021232.1| methionyl-tRNA formyltransferase [Escherichia coli JB1-95]
gi|417295711|ref|ZP_12082958.1| methionyl-tRNA formyltransferase [Escherichia coli 900105 (10e)]
gi|417593690|ref|ZP_12244379.1| methionyl-tRNA formyltransferase [Escherichia coli 2534-86]
gi|419198993|ref|ZP_13742287.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8A]
gi|419205418|ref|ZP_13748581.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8B]
gi|419211748|ref|ZP_13754815.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8C]
gi|419217688|ref|ZP_13760682.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8D]
gi|419223437|ref|ZP_13766349.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8E]
gi|419228910|ref|ZP_13771751.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9A]
gi|419234484|ref|ZP_13777252.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9B]
gi|419241062|ref|ZP_13783752.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9C]
gi|419245356|ref|ZP_13787989.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9D]
gi|419251217|ref|ZP_13793785.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9E]
gi|419256909|ref|ZP_13799409.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10A]
gi|419263894|ref|ZP_13806296.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10B]
gi|419269318|ref|ZP_13811661.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10C]
gi|419275370|ref|ZP_13817653.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10D]
gi|419286205|ref|ZP_13828368.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10F]
gi|419878379|ref|ZP_14399851.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|419879807|ref|ZP_14401231.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CVM9545]
gi|419891906|ref|ZP_14411946.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CVM9570]
gi|419897528|ref|ZP_14417112.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CVM9574]
gi|419904397|ref|ZP_14423397.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CVM9942]
gi|419906934|ref|ZP_14425791.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O26:H11 str. CVM10026]
gi|420090405|ref|ZP_14602174.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CVM9602]
gi|420096499|ref|ZP_14607868.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CVM9634]
gi|420104544|ref|ZP_14615235.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|420111239|ref|ZP_14621083.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|420117571|ref|ZP_14626927.1| hypothetical protein ECO10021_28892 [Escherichia coli O26:H11 str.
CVM10021]
gi|420123472|ref|ZP_14632362.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CVM10030]
gi|420126554|ref|ZP_14635289.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CVM10224]
gi|420135674|ref|ZP_14643754.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CVM9952]
gi|424748551|ref|ZP_18176691.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424766950|ref|ZP_18194287.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424769952|ref|ZP_18197168.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425381567|ref|ZP_18765564.1| methionyl-tRNA formyltransferase [Escherichia coli EC1865]
gi|257756057|dbj|BAI27559.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O26:H11 str. 11368]
gi|257766386|dbj|BAI37881.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O111:H- str. 11128]
gi|323154125|gb|EFZ40328.1| methionyl-tRNA formyltransferase [Escherichia coli EPECa14]
gi|323179176|gb|EFZ64750.1| methionyl-tRNA formyltransferase [Escherichia coli OK1180]
gi|345333277|gb|EGW65728.1| methionyl-tRNA formyltransferase [Escherichia coli 2534-86]
gi|378044150|gb|EHW06571.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8A]
gi|378044872|gb|EHW07282.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8B]
gi|378049981|gb|EHW12315.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8C]
gi|378058535|gb|EHW20743.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8D]
gi|378061878|gb|EHW24057.1| methionyl-tRNA formyltransferase [Escherichia coli DEC8E]
gi|378069748|gb|EHW31833.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9A]
gi|378074619|gb|EHW36653.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9B]
gi|378076279|gb|EHW38287.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9C]
gi|378087341|gb|EHW49201.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9D]
gi|378091043|gb|EHW52877.1| methionyl-tRNA formyltransferase [Escherichia coli DEC9E]
gi|378097467|gb|EHW59219.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10A]
gi|378101113|gb|EHW62802.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10B]
gi|378107707|gb|EHW69326.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10C]
gi|378112471|gb|EHW74050.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10D]
gi|378126835|gb|EHW88228.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10F]
gi|386188888|gb|EIH77677.1| methionyl-tRNA formyltransferase [Escherichia coli 4.0522]
gi|386195419|gb|EIH89654.1| methionyl-tRNA formyltransferase [Escherichia coli JB1-95]
gi|386259155|gb|EIJ14629.1| methionyl-tRNA formyltransferase [Escherichia coli 900105 (10e)]
gi|388335447|gb|EIL02012.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|388348762|gb|EIL14333.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CVM9570]
gi|388355172|gb|EIL20031.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CVM9574]
gi|388367678|gb|EIL31344.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CVM9942]
gi|388370640|gb|EIL34157.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CVM9545]
gi|388377854|gb|EIL40634.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O26:H11 str. CVM10026]
gi|394385814|gb|EJE63330.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CVM9602]
gi|394388310|gb|EJE65592.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CVM9634]
gi|394392137|gb|EJE68932.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CVM10224]
gi|394398835|gb|EJE74972.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|394401964|gb|EJE77728.1| hypothetical protein ECO10021_28892 [Escherichia coli O26:H11 str.
CVM10021]
gi|394403982|gb|EJE79470.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|394417012|gb|EJE90770.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CVM10030]
gi|394419732|gb|EJE93314.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CVM9952]
gi|408294309|gb|EKJ12709.1| methionyl-tRNA formyltransferase [Escherichia coli EC1865]
gi|421933187|gb|EKT90980.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421943105|gb|EKU00397.1| methionyl-tRNA formyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421944158|gb|EKU01419.1| methionyl-tRNA formyltransferase [Escherichia coli O26:H11 str.
CFSAN001629]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E+ +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQESQQLVADLQADVMVVVAYGLILP 96
>gi|33591755|ref|NP_879399.1| methionyl-tRNA formyltransferase [Bordetella pertussis Tohama I]
gi|384203058|ref|YP_005588797.1| methionyl-tRNA formyltransferase [Bordetella pertussis CS]
gi|408417246|ref|YP_006627953.1| methionyl-tRNA formyltransferase [Bordetella pertussis 18323]
gi|39931241|sp|Q7VS89.1|FMT_BORPE RecName: Full=Methionyl-tRNA formyltransferase
gi|33571398|emb|CAE44879.1| methionyl-tRNA formyltransferase [Bordetella pertussis Tohama I]
gi|332381172|gb|AEE66019.1| methionyl-tRNA formyltransferase [Bordetella pertussis CS]
gi|401779416|emb|CCJ64938.1| methionyl-tRNA formyltransferase [Bordetella pertussis 18323]
Length = 312
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD L + H++ L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAGRGLKLTPSPVKQAALAAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A L ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAAARAQLERVAPDVMVVAAYGLILPQ 101
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+ T+ L ++L ++ I+D + + L + Q + G +YA + K EA LD SL
Sbjct: 166 QQTAAQLHDELARVGGQAIVDALAALA--QGGLAPRRQPDAGVTYAAKLYKAEAALDCSL 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP PGA I +K+W+A AL + G +L + GI
Sbjct: 224 PAAVLARRVRAFNPVPGAT---IRLPGLDDPVKVWRAQALEQAAGGTSGAVLRADAQ-GI 279
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V++LLELQK K+ F+ G
Sbjct: 280 DIATGQGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|432854692|ref|ZP_20082963.1| methionyl-tRNA formyltransferase [Escherichia coli KTE144]
gi|431397774|gb|ELG81206.1| methionyl-tRNA formyltransferase [Escherichia coli KTE144]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + ++ +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKALPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+L E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLRL--------QENQQLVADLQADVMVVVAYGLILP 96
>gi|420338989|ref|ZP_14840541.1| methionyl-tRNA formyltransferase [Shigella flexneri K-315]
gi|391257217|gb|EIQ16337.1| methionyl-tRNA formyltransferase [Shigella flexneri K-315]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|420375831|ref|ZP_14875654.1| methionyl-tRNA formyltransferase, partial [Shigella flexneri
1235-66]
gi|391309265|gb|EIQ66941.1| methionyl-tRNA formyltransferase, partial [Shigella flexneri
1235-66]
Length = 227
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 71 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 128
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 129 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 182
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 183 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 214
>gi|417709369|ref|ZP_12358392.1| methionyl-tRNA formyltransferase [Shigella flexneri VA-6]
gi|417829793|ref|ZP_12476336.1| methionyl-tRNA formyltransferase [Shigella flexneri J1713]
gi|420334116|ref|ZP_14835744.1| methionyl-tRNA formyltransferase [Shigella flexneri K-1770]
gi|332998301|gb|EGK17902.1| methionyl-tRNA formyltransferase [Shigella flexneri VA-6]
gi|335573685|gb|EGM60029.1| methionyl-tRNA formyltransferase [Shigella flexneri J1713]
gi|391243161|gb|EIQ02457.1| methionyl-tRNA formyltransferase [Shigella flexneri K-1770]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEEGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|432949482|ref|ZP_20144263.1| methionyl-tRNA formyltransferase [Escherichia coli KTE196]
gi|433044819|ref|ZP_20232305.1| methionyl-tRNA formyltransferase [Escherichia coli KTE117]
gi|431454029|gb|ELH34407.1| methionyl-tRNA formyltransferase [Escherichia coli KTE196]
gi|431553836|gb|ELI27758.1| methionyl-tRNA formyltransferase [Escherichia coli KTE117]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|82778585|ref|YP_404934.1| methionyl-tRNA formyltransferase [Shigella dysenteriae Sd197]
gi|309785610|ref|ZP_07680241.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 1617]
gi|419921288|ref|ZP_14439344.1| methionyl-tRNA formyltransferase [Escherichia coli 541-15]
gi|123742077|sp|Q32B62.1|FMT_SHIDS RecName: Full=Methionyl-tRNA formyltransferase
gi|81242733|gb|ABB63443.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella dysenteriae Sd197]
gi|308926730|gb|EFP72206.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 1617]
gi|388397898|gb|EIL58855.1| methionyl-tRNA formyltransferase [Escherichia coli 541-15]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|417636377|ref|ZP_12286586.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_S1191]
gi|345385265|gb|EGX15110.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_S1191]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPFF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ +++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVAELQADVMVVVAYGLILP 96
>gi|218706895|ref|YP_002414414.1| methionyl-tRNA formyltransferase [Escherichia coli UMN026]
gi|293406885|ref|ZP_06650809.1| methionyl-tRNA formyltransferase [Escherichia coli FVEC1412]
gi|298382626|ref|ZP_06992221.1| methionyl-tRNA formyltransferase [Escherichia coli FVEC1302]
gi|331664900|ref|ZP_08365801.1| methionyl-tRNA formyltransferase [Escherichia coli TA143]
gi|417141382|ref|ZP_11984295.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0259]
gi|417309804|ref|ZP_12096633.1| Methionyl-tRNA formyltransferase [Escherichia coli PCN033]
gi|417588390|ref|ZP_12239153.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_C165-02]
gi|419933797|ref|ZP_14450947.1| methionyl-tRNA formyltransferase [Escherichia coli 576-1]
gi|422973941|ref|ZP_16976038.1| methionyl-tRNA formyltransferase [Escherichia coli TA124]
gi|432355281|ref|ZP_19598548.1| methionyl-tRNA formyltransferase [Escherichia coli KTE2]
gi|432403656|ref|ZP_19646400.1| methionyl-tRNA formyltransferase [Escherichia coli KTE26]
gi|432427917|ref|ZP_19670400.1| methionyl-tRNA formyltransferase [Escherichia coli KTE181]
gi|432462621|ref|ZP_19704754.1| methionyl-tRNA formyltransferase [Escherichia coli KTE204]
gi|432477613|ref|ZP_19719602.1| methionyl-tRNA formyltransferase [Escherichia coli KTE208]
gi|432491061|ref|ZP_19732924.1| methionyl-tRNA formyltransferase [Escherichia coli KTE213]
gi|432519475|ref|ZP_19756654.1| methionyl-tRNA formyltransferase [Escherichia coli KTE228]
gi|432539633|ref|ZP_19776526.1| methionyl-tRNA formyltransferase [Escherichia coli KTE235]
gi|432545018|ref|ZP_19781852.1| methionyl-tRNA formyltransferase [Escherichia coli KTE236]
gi|432550500|ref|ZP_19787259.1| methionyl-tRNA formyltransferase [Escherichia coli KTE237]
gi|432623642|ref|ZP_19859659.1| methionyl-tRNA formyltransferase [Escherichia coli KTE76]
gi|432633153|ref|ZP_19869073.1| methionyl-tRNA formyltransferase [Escherichia coli KTE80]
gi|432642843|ref|ZP_19878668.1| methionyl-tRNA formyltransferase [Escherichia coli KTE83]
gi|432667840|ref|ZP_19903412.1| methionyl-tRNA formyltransferase [Escherichia coli KTE116]
gi|432767646|ref|ZP_20002039.1| methionyl-tRNA formyltransferase [Escherichia coli KTE50]
gi|432772034|ref|ZP_20006348.1| methionyl-tRNA formyltransferase [Escherichia coli KTE54]
gi|432817049|ref|ZP_20050809.1| methionyl-tRNA formyltransferase [Escherichia coli KTE115]
gi|432841088|ref|ZP_20074547.1| methionyl-tRNA formyltransferase [Escherichia coli KTE140]
gi|432870773|ref|ZP_20091193.1| methionyl-tRNA formyltransferase [Escherichia coli KTE147]
gi|432888619|ref|ZP_20102332.1| methionyl-tRNA formyltransferase [Escherichia coli KTE158]
gi|432914858|ref|ZP_20120185.1| methionyl-tRNA formyltransferase [Escherichia coli KTE190]
gi|432963803|ref|ZP_20153150.1| methionyl-tRNA formyltransferase [Escherichia coli KTE202]
gi|433020418|ref|ZP_20208573.1| methionyl-tRNA formyltransferase [Escherichia coli KTE105]
gi|433054911|ref|ZP_20242077.1| methionyl-tRNA formyltransferase [Escherichia coli KTE122]
gi|433064728|ref|ZP_20251638.1| methionyl-tRNA formyltransferase [Escherichia coli KTE125]
gi|433069602|ref|ZP_20256375.1| methionyl-tRNA formyltransferase [Escherichia coli KTE128]
gi|433160388|ref|ZP_20345214.1| methionyl-tRNA formyltransferase [Escherichia coli KTE177]
gi|433180108|ref|ZP_20364493.1| methionyl-tRNA formyltransferase [Escherichia coli KTE82]
gi|433205004|ref|ZP_20388754.1| methionyl-tRNA formyltransferase [Escherichia coli KTE95]
gi|226704298|sp|B7NDQ9.1|FMT_ECOLU RecName: Full=Methionyl-tRNA formyltransferase
gi|218433992|emb|CAR14909.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli UMN026]
gi|291425696|gb|EFE98730.1| methionyl-tRNA formyltransferase [Escherichia coli FVEC1412]
gi|298276462|gb|EFI17980.1| methionyl-tRNA formyltransferase [Escherichia coli FVEC1302]
gi|331057410|gb|EGI29396.1| methionyl-tRNA formyltransferase [Escherichia coli TA143]
gi|338768586|gb|EGP23377.1| Methionyl-tRNA formyltransferase [Escherichia coli PCN033]
gi|345332463|gb|EGW64919.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_C165-02]
gi|371596152|gb|EHN84992.1| methionyl-tRNA formyltransferase [Escherichia coli TA124]
gi|386155872|gb|EIH12222.1| methionyl-tRNA formyltransferase [Escherichia coli 97.0259]
gi|388410163|gb|EIL70414.1| methionyl-tRNA formyltransferase [Escherichia coli 576-1]
gi|430872752|gb|ELB96332.1| methionyl-tRNA formyltransferase [Escherichia coli KTE2]
gi|430923069|gb|ELC43806.1| methionyl-tRNA formyltransferase [Escherichia coli KTE26]
gi|430951755|gb|ELC70963.1| methionyl-tRNA formyltransferase [Escherichia coli KTE181]
gi|430985884|gb|ELD02467.1| methionyl-tRNA formyltransferase [Escherichia coli KTE204]
gi|431002220|gb|ELD17733.1| methionyl-tRNA formyltransferase [Escherichia coli KTE208]
gi|431018209|gb|ELD31645.1| methionyl-tRNA formyltransferase [Escherichia coli KTE213]
gi|431047727|gb|ELD57712.1| methionyl-tRNA formyltransferase [Escherichia coli KTE228]
gi|431067049|gb|ELD75658.1| methionyl-tRNA formyltransferase [Escherichia coli KTE235]
gi|431071845|gb|ELD79602.1| methionyl-tRNA formyltransferase [Escherichia coli KTE236]
gi|431077402|gb|ELD84653.1| methionyl-tRNA formyltransferase [Escherichia coli KTE237]
gi|431156570|gb|ELE57237.1| methionyl-tRNA formyltransferase [Escherichia coli KTE76]
gi|431167336|gb|ELE67601.1| methionyl-tRNA formyltransferase [Escherichia coli KTE80]
gi|431177609|gb|ELE77523.1| methionyl-tRNA formyltransferase [Escherichia coli KTE83]
gi|431197671|gb|ELE96498.1| methionyl-tRNA formyltransferase [Escherichia coli KTE116]
gi|431322065|gb|ELG09653.1| methionyl-tRNA formyltransferase [Escherichia coli KTE50]
gi|431324025|gb|ELG11481.1| methionyl-tRNA formyltransferase [Escherichia coli KTE54]
gi|431361452|gb|ELG48033.1| methionyl-tRNA formyltransferase [Escherichia coli KTE115]
gi|431386320|gb|ELG70276.1| methionyl-tRNA formyltransferase [Escherichia coli KTE140]
gi|431408758|gb|ELG91940.1| methionyl-tRNA formyltransferase [Escherichia coli KTE147]
gi|431413972|gb|ELG96721.1| methionyl-tRNA formyltransferase [Escherichia coli KTE158]
gi|431435926|gb|ELH17533.1| methionyl-tRNA formyltransferase [Escherichia coli KTE190]
gi|431470330|gb|ELH50252.1| methionyl-tRNA formyltransferase [Escherichia coli KTE202]
gi|431528055|gb|ELI04766.1| methionyl-tRNA formyltransferase [Escherichia coli KTE105]
gi|431567242|gb|ELI40243.1| methionyl-tRNA formyltransferase [Escherichia coli KTE122]
gi|431578774|gb|ELI51364.1| methionyl-tRNA formyltransferase [Escherichia coli KTE125]
gi|431580167|gb|ELI52733.1| methionyl-tRNA formyltransferase [Escherichia coli KTE128]
gi|431674718|gb|ELJ40874.1| methionyl-tRNA formyltransferase [Escherichia coli KTE177]
gi|431698412|gb|ELJ63456.1| methionyl-tRNA formyltransferase [Escherichia coli KTE82]
gi|431716927|gb|ELJ81031.1| methionyl-tRNA formyltransferase [Escherichia coli KTE95]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + ++ +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKALPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|410418045|ref|YP_006898494.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica MO149]
gi|408445340|emb|CCJ56989.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica MO149]
Length = 312
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+ T+ L ++L ++ I+D + + L + Q + G +YA + K EA LD SL
Sbjct: 166 QQTAAQLHDELARVGGQAIVDALAALA--QGGLAPRRQPDAGVTYAAKLDKAEAALDCSL 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP PGA + +K+W+A AL + PG +L + GI
Sbjct: 224 PAAVLARRVRAFNPVPGATIRLPGLDDP---VKVWRAQALEQAAGGTPGAVLRADAQ-GI 279
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V++LLELQK K+ F+ G
Sbjct: 280 DIATGQGVLRLLELQKAGGKRQPVDVFVRG 309
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD L + H++ L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAGRGLKLTPSPVKQAALAAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A L + D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAAARAQLEHVAPDVMVVAAYGLILPQ 101
>gi|295397806|ref|ZP_06807871.1| methionyl-tRNA formyltransferase [Aerococcus viridans ATCC 11563]
gi|294973941|gb|EFG49703.1| methionyl-tRNA formyltransferase [Aerococcus viridans ATCC 11563]
Length = 327
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 68/314 (21%)
Query: 2 KIIFAGTSISAAAILDTL--YNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
+I+F GT + ILD L + ++ +V ++T+PD GR KL SPVK+ ALKH I +
Sbjct: 3 RIVFMGTPAFSVNILDALVAQDDQYEVVAVVTQPDRPVGRKRKLTPSPVKEAALKHDIPV 62
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL--------- 108
QP + + + + E L+ F + IL P+ ++ + L
Sbjct: 63 YQPEKIGRDQEIKDLLAEDIDLIVTAAFGQFLPTSILEAPKYGAVNVHASLLPKYRGGAP 122
Query: 109 --------EKLSKILIIDTIKK-------------IEYDMT------------------- 128
+K + + I+ +KK IE D T
Sbjct: 123 VHYAIWNGDKETGVTIMRMVKKMDAGDILTQVVVPIESDDTVATMFDKLSVAGTDLLIET 182
Query: 129 --KLF---FKPQSNIGE--SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
KLF +PQ+ + E +++P I + +DW A+ I ++ AFN +P A T
Sbjct: 183 LPKLFAGEIEPQAQVEEEATFSPNITSQQEQIDWRKEAQQIDNQVRAFNAWPVAHTKVDG 242
Query: 182 YQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVC--GKNVIKLLELQKNNKKK 238
+ KIW+ + EST +KPGTI+ + L V K V+ + +LQ KKK
Sbjct: 243 QR-----WKIWQVAPVKEESTDEKPGTIIKIQKKPAQLWVATGNKTVLAIEQLQPAGKKK 297
Query: 239 ISATEFINGCIKNI 252
+ FING N+
Sbjct: 298 MDVAAFINGGAGNL 311
>gi|193066482|ref|ZP_03047526.1| methionyl-tRNA formyltransferase [Escherichia coli E22]
gi|194430290|ref|ZP_03062785.1| methionyl-tRNA formyltransferase [Escherichia coli B171]
gi|215488587|ref|YP_002331018.1| methionyl-tRNA formyltransferase [Escherichia coli O127:H6 str.
E2348/69]
gi|218696980|ref|YP_002404647.1| methionyl-tRNA formyltransferase [Escherichia coli 55989]
gi|260846085|ref|YP_003223863.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O103:H2 str. 12009]
gi|300935285|ref|ZP_07150296.1| methionyl-tRNA formyltransferase [Escherichia coli MS 21-1]
gi|312968387|ref|ZP_07782597.1| methionyl-tRNA formyltransferase [Escherichia coli 2362-75]
gi|331670117|ref|ZP_08370956.1| methionyl-tRNA formyltransferase [Escherichia coli TA271]
gi|331679356|ref|ZP_08380026.1| methionyl-tRNA formyltransferase [Escherichia coli H591]
gi|332281842|ref|ZP_08394255.1| methionyl-tRNA formyltransferase [Shigella sp. D9]
gi|387608994|ref|YP_006097850.1| methionyl-tRNA formyltransferase [Escherichia coli 042]
gi|407471250|ref|YP_006782307.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407480094|ref|YP_006777243.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
2011C-3493]
gi|410480655|ref|YP_006768201.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415795751|ref|ZP_11497264.1| methionyl-tRNA formyltransferase [Escherichia coli E128010]
gi|415810456|ref|ZP_11502823.1| methionyl-tRNA formyltransferase [Escherichia coli LT-68]
gi|415839120|ref|ZP_11520938.1| methionyl-tRNA formyltransferase [Escherichia coli RN587/1]
gi|417174995|ref|ZP_12004791.1| methionyl-tRNA formyltransferase [Escherichia coli 3.2608]
gi|417184190|ref|ZP_12009882.1| methionyl-tRNA formyltransferase [Escherichia coli 93.0624]
gi|417228004|ref|ZP_12029762.1| methionyl-tRNA formyltransferase [Escherichia coli 5.0959]
gi|417250321|ref|ZP_12042105.1| methionyl-tRNA formyltransferase [Escherichia coli 4.0967]
gi|417267074|ref|ZP_12054435.1| methionyl-tRNA formyltransferase [Escherichia coli 3.3884]
gi|417281084|ref|ZP_12068384.1| methionyl-tRNA formyltransferase [Escherichia coli 3003]
gi|417625367|ref|ZP_12275658.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_H.1.8]
gi|417641187|ref|ZP_12291319.1| methionyl-tRNA formyltransferase [Escherichia coli TX1999]
gi|417757631|ref|ZP_12405696.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2B]
gi|417806928|ref|ZP_12453860.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
LB226692]
gi|417834674|ref|ZP_12481116.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
01-09591]
gi|417866399|ref|ZP_12511440.1| fmt [Escherichia coli O104:H4 str. C227-11]
gi|418942235|ref|ZP_13495523.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H43 str.
T22]
gi|418998676|ref|ZP_13546260.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1A]
gi|419004006|ref|ZP_13551518.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1B]
gi|419009680|ref|ZP_13557098.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1C]
gi|419015265|ref|ZP_13562604.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1D]
gi|419020310|ref|ZP_13567609.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1E]
gi|419025774|ref|ZP_13572993.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2A]
gi|419030904|ref|ZP_13578052.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2C]
gi|419036548|ref|ZP_13583624.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2D]
gi|419041608|ref|ZP_13588626.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2E]
gi|419172119|ref|ZP_13715998.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7A]
gi|419182681|ref|ZP_13726290.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7C]
gi|419188300|ref|ZP_13731806.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7D]
gi|419193428|ref|ZP_13736873.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7E]
gi|419291478|ref|ZP_13833563.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11A]
gi|419296766|ref|ZP_13838803.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11B]
gi|419302282|ref|ZP_13844274.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11C]
gi|419308294|ref|ZP_13850187.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11D]
gi|419313322|ref|ZP_13855180.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11E]
gi|419318730|ref|ZP_13860528.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12A]
gi|419324996|ref|ZP_13866683.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12B]
gi|419330940|ref|ZP_13872536.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12C]
gi|419336426|ref|ZP_13877943.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12D]
gi|419341836|ref|ZP_13883291.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12E]
gi|419371868|ref|ZP_13912977.1| methionyl-tRNA formyltransferase [Escherichia coli DEC14A]
gi|419806440|ref|ZP_14331547.1| methionyl-tRNA formyltransferase [Escherichia coli AI27]
gi|419872194|ref|ZP_14394235.1| methionyl-tRNA formyltransferase [Escherichia coli O103:H2 str.
CVM9450]
gi|419949212|ref|ZP_14465458.1| methionyl-tRNA formyltransferase [Escherichia coli CUMT8]
gi|420387528|ref|ZP_14886868.1| methionyl-tRNA formyltransferase [Escherichia coli EPECa12]
gi|420393396|ref|ZP_14892641.1| methionyl-tRNA formyltransferase [Escherichia coli EPEC C342-62]
gi|422989478|ref|ZP_16980250.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
C227-11]
gi|422996373|ref|ZP_16987136.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
C236-11]
gi|423001523|ref|ZP_16992276.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
09-7901]
gi|423005182|ref|ZP_16995927.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
04-8351]
gi|423011688|ref|ZP_17002420.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-3677]
gi|423020915|ref|ZP_17011622.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4404]
gi|423026080|ref|ZP_17016775.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4522]
gi|423031899|ref|ZP_17022585.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4623]
gi|423034771|ref|ZP_17025449.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423039899|ref|ZP_17030568.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423046583|ref|ZP_17037242.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423055120|ref|ZP_17043926.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423057112|ref|ZP_17045911.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423707574|ref|ZP_17681954.1| methionyl-tRNA formyltransferase [Escherichia coli B799]
gi|425279675|ref|ZP_18670901.1| methionyl-tRNA formyltransferase [Escherichia coli ARS4.2123]
gi|425290425|ref|ZP_18681247.1| methionyl-tRNA formyltransferase [Escherichia coli 3006]
gi|427811070|ref|ZP_18978135.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet )
N-formyltransferase [Escherichia coli]
gi|429720944|ref|ZP_19255865.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429772841|ref|ZP_19304859.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02030]
gi|429778207|ref|ZP_19310175.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429786513|ref|ZP_19318406.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02092]
gi|429787457|ref|ZP_19319347.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02093]
gi|429793253|ref|ZP_19325099.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02281]
gi|429799833|ref|ZP_19331626.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02318]
gi|429803448|ref|ZP_19335206.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02913]
gi|429808089|ref|ZP_19339809.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-03439]
gi|429813789|ref|ZP_19345465.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-04080]
gi|429818999|ref|ZP_19350631.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-03943]
gi|429905348|ref|ZP_19371324.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429909485|ref|ZP_19375447.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429915355|ref|ZP_19381301.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429920402|ref|ZP_19386329.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429926206|ref|ZP_19392117.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930141|ref|ZP_19396041.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429936679|ref|ZP_19402564.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429942361|ref|ZP_19408233.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429945044|ref|ZP_19410904.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429952599|ref|ZP_19418444.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429955954|ref|ZP_19421784.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432378462|ref|ZP_19621445.1| methionyl-tRNA formyltransferase [Escherichia coli KTE12]
gi|432528141|ref|ZP_19765217.1| methionyl-tRNA formyltransferase [Escherichia coli KTE233]
gi|432535652|ref|ZP_19772611.1| methionyl-tRNA formyltransferase [Escherichia coli KTE234]
gi|432604112|ref|ZP_19840342.1| methionyl-tRNA formyltransferase [Escherichia coli KTE66]
gi|432618524|ref|ZP_19854628.1| methionyl-tRNA formyltransferase [Escherichia coli KTE75]
gi|432682019|ref|ZP_19917377.1| methionyl-tRNA formyltransferase [Escherichia coli KTE143]
gi|432751753|ref|ZP_19986332.1| methionyl-tRNA formyltransferase [Escherichia coli KTE29]
gi|432766681|ref|ZP_20001096.1| methionyl-tRNA formyltransferase [Escherichia coli KTE48]
gi|432807536|ref|ZP_20041450.1| methionyl-tRNA formyltransferase [Escherichia coli KTE91]
gi|432828912|ref|ZP_20062529.1| methionyl-tRNA formyltransferase [Escherichia coli KTE135]
gi|432836236|ref|ZP_20069768.1| methionyl-tRNA formyltransferase [Escherichia coli KTE136]
gi|432930658|ref|ZP_20131066.1| methionyl-tRNA formyltransferase [Escherichia coli KTE184]
gi|432965058|ref|ZP_20153982.1| methionyl-tRNA formyltransferase [Escherichia coli KTE203]
gi|433131835|ref|ZP_20317264.1| methionyl-tRNA formyltransferase [Escherichia coli KTE163]
gi|433136523|ref|ZP_20321855.1| methionyl-tRNA formyltransferase [Escherichia coli KTE166]
gi|433195322|ref|ZP_20379299.1| methionyl-tRNA formyltransferase [Escherichia coli KTE90]
gi|443619350|ref|YP_007383206.1| methionyl-tRNA formyltransferase [Escherichia coli APEC O78]
gi|254789352|sp|B7UK11.1|FMT_ECO27 RecName: Full=Methionyl-tRNA formyltransferase
gi|254789353|sp|B7LHY8.1|FMT_ECO55 RecName: Full=Methionyl-tRNA formyltransferase
gi|192925863|gb|EDV80513.1| methionyl-tRNA formyltransferase [Escherichia coli E22]
gi|194411679|gb|EDX28006.1| methionyl-tRNA formyltransferase [Escherichia coli B171]
gi|215266659|emb|CAS11098.1| 10-formyltetrahydrofolate: L-methionyl-tRNA (fMet)
N-formyltransferase [Escherichia coli O127:H6 str.
E2348/69]
gi|218353712|emb|CAU99983.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli 55989]
gi|257761232|dbj|BAI32729.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O103:H2 str. 12009]
gi|284923294|emb|CBG36388.1| methionyl-tRNA formyltransferase [Escherichia coli 042]
gi|300459488|gb|EFK22981.1| methionyl-tRNA formyltransferase [Escherichia coli MS 21-1]
gi|312287212|gb|EFR15122.1| methionyl-tRNA formyltransferase [Escherichia coli 2362-75]
gi|323162966|gb|EFZ48801.1| methionyl-tRNA formyltransferase [Escherichia coli E128010]
gi|323173924|gb|EFZ59552.1| methionyl-tRNA formyltransferase [Escherichia coli LT-68]
gi|323189107|gb|EFZ74391.1| methionyl-tRNA formyltransferase [Escherichia coli RN587/1]
gi|331062179|gb|EGI34099.1| methionyl-tRNA formyltransferase [Escherichia coli TA271]
gi|331072528|gb|EGI43853.1| methionyl-tRNA formyltransferase [Escherichia coli H591]
gi|332104194|gb|EGJ07540.1| methionyl-tRNA formyltransferase [Shigella sp. D9]
gi|340732818|gb|EGR61954.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
01-09591]
gi|340738385|gb|EGR72634.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
LB226692]
gi|341919688|gb|EGT69298.1| fmt [Escherichia coli O104:H4 str. C227-11]
gi|345373431|gb|EGX05390.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_H.1.8]
gi|345391489|gb|EGX21278.1| methionyl-tRNA formyltransferase [Escherichia coli TX1999]
gi|354858613|gb|EHF19062.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
C236-11]
gi|354863067|gb|EHF23501.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
C227-11]
gi|354863957|gb|EHF24387.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
04-8351]
gi|354871102|gb|EHF31500.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
09-7901]
gi|354877640|gb|EHF37998.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-3677]
gi|354886541|gb|EHF46823.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4404]
gi|354890433|gb|EHF50672.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4522]
gi|354894754|gb|EHF54944.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4623]
gi|354906559|gb|EHF66633.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354909202|gb|EHF69235.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354911187|gb|EHF71192.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354913960|gb|EHF73945.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354921638|gb|EHF81559.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|375322424|gb|EHS68181.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H43 str.
T22]
gi|377840300|gb|EHU05374.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1A]
gi|377840457|gb|EHU05529.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1C]
gi|377843012|gb|EHU08053.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1B]
gi|377854261|gb|EHU19148.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1D]
gi|377857311|gb|EHU22163.1| methionyl-tRNA formyltransferase [Escherichia coli DEC1E]
gi|377860486|gb|EHU25311.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2A]
gi|377871282|gb|EHU35946.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2B]
gi|377874180|gb|EHU38810.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2C]
gi|377876301|gb|EHU40908.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2D]
gi|377886782|gb|EHU51261.1| methionyl-tRNA formyltransferase [Escherichia coli DEC2E]
gi|378012857|gb|EHV75784.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7A]
gi|378021453|gb|EHV84155.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7C]
gi|378025240|gb|EHV87884.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7D]
gi|378035807|gb|EHV98359.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7E]
gi|378126203|gb|EHW87599.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11A]
gi|378138987|gb|EHX00236.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11B]
gi|378145543|gb|EHX06705.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11D]
gi|378146853|gb|EHX08002.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11C]
gi|378155241|gb|EHX16300.1| methionyl-tRNA formyltransferase [Escherichia coli DEC11E]
gi|378162339|gb|EHX23303.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12B]
gi|378166152|gb|EHX27078.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12A]
gi|378166874|gb|EHX27792.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12C]
gi|378179650|gb|EHX40358.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12D]
gi|378183917|gb|EHX44556.1| methionyl-tRNA formyltransferase [Escherichia coli DEC12E]
gi|378213495|gb|EHX73807.1| methionyl-tRNA formyltransferase [Escherichia coli DEC14A]
gi|384470597|gb|EIE54701.1| methionyl-tRNA formyltransferase [Escherichia coli AI27]
gi|385709725|gb|EIG46721.1| methionyl-tRNA formyltransferase [Escherichia coli B799]
gi|386177687|gb|EIH55166.1| methionyl-tRNA formyltransferase [Escherichia coli 3.2608]
gi|386183752|gb|EIH66499.1| methionyl-tRNA formyltransferase [Escherichia coli 93.0624]
gi|386207339|gb|EII11844.1| methionyl-tRNA formyltransferase [Escherichia coli 5.0959]
gi|386220642|gb|EII37106.1| methionyl-tRNA formyltransferase [Escherichia coli 4.0967]
gi|386229432|gb|EII56787.1| methionyl-tRNA formyltransferase [Escherichia coli 3.3884]
gi|386245413|gb|EII87143.1| methionyl-tRNA formyltransferase [Escherichia coli 3003]
gi|388335312|gb|EIL01881.1| methionyl-tRNA formyltransferase [Escherichia coli O103:H2 str.
CVM9450]
gi|388419337|gb|EIL79079.1| methionyl-tRNA formyltransferase [Escherichia coli CUMT8]
gi|391302882|gb|EIQ60728.1| methionyl-tRNA formyltransferase [Escherichia coli EPECa12]
gi|391310237|gb|EIQ67892.1| methionyl-tRNA formyltransferase [Escherichia coli EPEC C342-62]
gi|406775817|gb|AFS55241.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407052391|gb|AFS72442.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
2011C-3493]
gi|407067285|gb|AFS88332.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408198739|gb|EKI23955.1| methionyl-tRNA formyltransferase [Escherichia coli ARS4.2123]
gi|408210421|gb|EKI34985.1| methionyl-tRNA formyltransferase [Escherichia coli 3006]
gi|412971249|emb|CCJ45904.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet )
N-formyltransferase [Escherichia coli]
gi|429346685|gb|EKY83464.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02092]
gi|429356664|gb|EKY93339.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429357539|gb|EKY94212.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02030]
gi|429372831|gb|EKZ09380.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02093]
gi|429374772|gb|EKZ11311.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02281]
gi|429377402|gb|EKZ13923.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02318]
gi|429388634|gb|EKZ25059.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-02913]
gi|429391403|gb|EKZ27807.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-03439]
gi|429392412|gb|EKZ28813.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-03943]
gi|429401933|gb|EKZ38226.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
11-04080]
gi|429402986|gb|EKZ39271.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429406613|gb|EKZ42868.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429414654|gb|EKZ50828.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429418124|gb|EKZ54270.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429424416|gb|EKZ60517.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429428219|gb|EKZ64295.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429433276|gb|EKZ69309.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429440236|gb|EKZ76214.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429445134|gb|EKZ81076.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429449075|gb|EKZ84977.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429454726|gb|EKZ90584.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429458833|gb|EKZ94653.1| methionyl-tRNA formyltransferase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430896096|gb|ELC18340.1| methionyl-tRNA formyltransferase [Escherichia coli KTE12]
gi|431057893|gb|ELD67303.1| methionyl-tRNA formyltransferase [Escherichia coli KTE234]
gi|431060764|gb|ELD70086.1| methionyl-tRNA formyltransferase [Escherichia coli KTE233]
gi|431137492|gb|ELE39337.1| methionyl-tRNA formyltransferase [Escherichia coli KTE66]
gi|431151575|gb|ELE52588.1| methionyl-tRNA formyltransferase [Escherichia coli KTE75]
gi|431217566|gb|ELF15132.1| methionyl-tRNA formyltransferase [Escherichia coli KTE143]
gi|431293693|gb|ELF83976.1| methionyl-tRNA formyltransferase [Escherichia coli KTE29]
gi|431307278|gb|ELF95570.1| methionyl-tRNA formyltransferase [Escherichia coli KTE48]
gi|431352977|gb|ELG39735.1| methionyl-tRNA formyltransferase [Escherichia coli KTE91]
gi|431382337|gb|ELG66675.1| methionyl-tRNA formyltransferase [Escherichia coli KTE136]
gi|431382984|gb|ELG67125.1| methionyl-tRNA formyltransferase [Escherichia coli KTE135]
gi|431460709|gb|ELH40994.1| methionyl-tRNA formyltransferase [Escherichia coli KTE184]
gi|431477173|gb|ELH56943.1| methionyl-tRNA formyltransferase [Escherichia coli KTE203]
gi|431643912|gb|ELJ11600.1| methionyl-tRNA formyltransferase [Escherichia coli KTE163]
gi|431654072|gb|ELJ21143.1| methionyl-tRNA formyltransferase [Escherichia coli KTE166]
gi|431713601|gb|ELJ77828.1| methionyl-tRNA formyltransferase [Escherichia coli KTE90]
gi|443423858|gb|AGC88762.1| methionyl-tRNA formyltransferase [Escherichia coli APEC O78]
Length = 315
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|24114565|ref|NP_709075.1| methionyl-tRNA formyltransferase [Shigella flexneri 2a str. 301]
gi|30064609|ref|NP_838780.1| methionyl-tRNA formyltransferase [Shigella flexneri 2a str. 2457T]
gi|110807135|ref|YP_690655.1| methionyl-tRNA formyltransferase [Shigella flexneri 5 str. 8401]
gi|384544869|ref|YP_005728933.1| Methionyl-tRNA formyltransferase [Shigella flexneri 2002017]
gi|415857093|ref|ZP_11531922.1| methionyl-tRNA formyltransferase [Shigella flexneri 2a str. 2457T]
gi|417704342|ref|ZP_12353440.1| methionyl-tRNA formyltransferase [Shigella flexneri K-218]
gi|417725891|ref|ZP_12374670.1| methionyl-tRNA formyltransferase [Shigella flexneri K-304]
gi|417731221|ref|ZP_12379900.1| methionyl-tRNA formyltransferase [Shigella flexneri K-671]
gi|417735354|ref|ZP_12383999.1| methionyl-tRNA formyltransferase [Shigella flexneri 2747-71]
gi|417741100|ref|ZP_12389664.1| methionyl-tRNA formyltransferase [Shigella flexneri 4343-70]
gi|417743804|ref|ZP_12392333.1| methionyl-tRNA formyltransferase [Shigella flexneri 2930-71]
gi|418252662|ref|ZP_12878215.1| methionyl-tRNA formyltransferase [Shigella flexneri 6603-63]
gi|420344664|ref|ZP_14846120.1| methionyl-tRNA formyltransferase [Shigella flexneri K-404]
gi|424839520|ref|ZP_18264157.1| methionyl-tRNA formyltransferase [Shigella flexneri 5a str. M90T]
gi|39931272|sp|Q83PZ0.1|FMT_SHIFL RecName: Full=Methionyl-tRNA formyltransferase
gi|122957163|sp|Q0T015.1|FMT_SHIF8 RecName: Full=Methionyl-tRNA formyltransferase
gi|24053760|gb|AAN44782.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella flexneri 2a str. 301]
gi|30042868|gb|AAP18591.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella flexneri 2a str. 2457T]
gi|110616683|gb|ABF05350.1| methionyl-tRNA formyltransferase [Shigella flexneri 5 str. 8401]
gi|281602656|gb|ADA75640.1| Methionyl-tRNA formyltransferase [Shigella flexneri 2002017]
gi|313648790|gb|EFS13230.1| methionyl-tRNA formyltransferase [Shigella flexneri 2a str. 2457T]
gi|332749604|gb|EGJ80021.1| methionyl-tRNA formyltransferase [Shigella flexneri K-671]
gi|332749747|gb|EGJ80162.1| methionyl-tRNA formyltransferase [Shigella flexneri 4343-70]
gi|332754002|gb|EGJ84375.1| methionyl-tRNA formyltransferase [Shigella flexneri 2747-71]
gi|332766529|gb|EGJ96736.1| methionyl-tRNA formyltransferase [Shigella flexneri 2930-71]
gi|332998312|gb|EGK17912.1| methionyl-tRNA formyltransferase [Shigella flexneri K-218]
gi|333012484|gb|EGK31865.1| methionyl-tRNA formyltransferase [Shigella flexneri K-304]
gi|383468572|gb|EID63593.1| methionyl-tRNA formyltransferase [Shigella flexneri 5a str. M90T]
gi|391261349|gb|EIQ20398.1| methionyl-tRNA formyltransferase [Shigella flexneri K-404]
gi|397902164|gb|EJL18493.1| methionyl-tRNA formyltransferase [Shigella flexneri 6603-63]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEEGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|194435068|ref|ZP_03067306.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 1012]
gi|416278430|ref|ZP_11644587.1| Methionyl-tRNA formyltransferase [Shigella boydii ATCC 9905]
gi|420349247|ref|ZP_14850627.1| methionyl-tRNA formyltransferase [Shigella boydii 965-58]
gi|194416675|gb|EDX32806.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 1012]
gi|320182715|gb|EFW57601.1| Methionyl-tRNA formyltransferase [Shigella boydii ATCC 9905]
gi|391266854|gb|EIQ25800.1| methionyl-tRNA formyltransferase [Shigella boydii 965-58]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|451944279|ref|YP_007464915.1| methionyl-tRNA formyltransferase [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451903666|gb|AGF72553.1| methionyl-tRNA formyltransferase [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 123/313 (39%), Gaps = 77/313 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A L L +S+H IV ++T+PD GRG L+ SPV A +H I+++
Sbjct: 1 MRLVFAGTPEPAVVALQRLIDSDHEIVAVITRPDARRGRGRTLHPSPVSALAQEHGIEVL 60
Query: 61 QPISLK--------LNGKYHKIANE-------------------THKLLN---------- 83
P +LK L + ++A E TH +N
Sbjct: 61 TPATLKPGTEEGDALRARLTELAPEAVPVVAYGNLITKDLLDLPTHGWVNLHFSLLPAWR 120
Query: 84 ---------------------KIE--FDIMIVMG-----ILPEDTSLTLQNKLEKLSKIL 115
+I+ D ++G I P DT+ L +L L
Sbjct: 121 GAAPVQASIRAGDDITGATTFRIDEGLDTGDILGTVTETIRPTDTADDLLTRLAHSGADL 180
Query: 116 IIDTIKKIEYDMTKLFFKPQSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
+ T+ + PQ GE +YAP I ++A +DW + R I A P PG
Sbjct: 181 LAATMDGLAAGA----IIPQPQTGEVTYAPKITTDDARIDWDTPDFAVDRHIRAHTPGPG 236
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T LK+ E+T PG L V N +LV ++L ++Q
Sbjct: 237 AWTVL-----GDDRLKVGPVTRHDGEATLAPGQ-LGVG-KNDVLVGTATGAVRLGKIQPP 289
Query: 235 NKKKISATEFING 247
KK + A ++ G
Sbjct: 290 GKKMMDAADWARG 302
>gi|331684930|ref|ZP_08385516.1| methionyl-tRNA formyltransferase [Escherichia coli H299]
gi|450193528|ref|ZP_21892035.1| methionyl-tRNA formyltransferase [Escherichia coli SEPT362]
gi|331077301|gb|EGI48513.1| methionyl-tRNA formyltransferase [Escherichia coli H299]
gi|449317421|gb|EMD07510.1| methionyl-tRNA formyltransferase [Escherichia coli SEPT362]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S+HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSDHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|16131167|ref|NP_417746.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|157162761|ref|YP_001460079.1| methionyl-tRNA formyltransferase [Escherichia coli HS]
gi|170018477|ref|YP_001723431.1| methionyl-tRNA formyltransferase [Escherichia coli ATCC 8739]
gi|170082808|ref|YP_001732128.1| methionyl-tRNA formyltransferase [Escherichia coli str. K-12
substr. DH10B]
gi|194439996|ref|ZP_03072054.1| methionyl-tRNA formyltransferase [Escherichia coli 101-1]
gi|238902378|ref|YP_002928174.1| methionyl-tRNA formyltransferase [Escherichia coli BW2952]
gi|251786541|ref|YP_003000845.1| 10-formyltetrahydrofolate:L-methionyl-tRNA[fMet]
N-formyltransferase [Escherichia coli BL21(DE3)]
gi|253771889|ref|YP_003034720.1| methionyl-tRNA formyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163215|ref|YP_003046323.1| methionyl-tRNA formyltransferase [Escherichia coli B str. REL606]
gi|254289965|ref|YP_003055713.1| methionyl-tRNA formyltransferase [Escherichia coli BL21(DE3)]
gi|297517905|ref|ZP_06936291.1| methionyl-tRNA formyltransferase [Escherichia coli OP50]
gi|312972451|ref|ZP_07786625.1| methionyl-tRNA formyltransferase [Escherichia coli 1827-70]
gi|331643983|ref|ZP_08345112.1| methionyl-tRNA formyltransferase [Escherichia coli H736]
gi|386283045|ref|ZP_10060685.1| methionyl-tRNA formyltransferase [Escherichia sp. 4_1_40B]
gi|386594005|ref|YP_006090405.1| methionyl-tRNA formyltransferase [Escherichia coli DH1]
gi|386616066|ref|YP_006135732.1| methionyl-tRNA formyltransferase [Escherichia coli UMNK88]
gi|387613963|ref|YP_006117079.1| methionyl-tRNA formyltransferase [Escherichia coli ETEC H10407]
gi|387622939|ref|YP_006130567.1| methionyl-tRNA formyltransferase [Escherichia coli DH1]
gi|388479951|ref|YP_492145.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
W3110]
gi|404376657|ref|ZP_10981811.1| methionyl-tRNA formyltransferase [Escherichia sp. 1_1_43]
gi|417264387|ref|ZP_12051781.1| methionyl-tRNA formyltransferase [Escherichia coli 2.3916]
gi|417271105|ref|ZP_12058454.1| methionyl-tRNA formyltransferase [Escherichia coli 2.4168]
gi|417276168|ref|ZP_12063500.1| methionyl-tRNA formyltransferase [Escherichia coli 3.2303]
gi|417291137|ref|ZP_12078418.1| methionyl-tRNA formyltransferase [Escherichia coli B41]
gi|417614893|ref|ZP_12265347.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_EH250]
gi|417619891|ref|ZP_12270297.1| methionyl-tRNA formyltransferase [Escherichia coli G58-1]
gi|417946709|ref|ZP_12589920.1| methionyl-tRNA formyltransferase [Escherichia coli XH140A]
gi|417978399|ref|ZP_12619167.1| methionyl-tRNA formyltransferase [Escherichia coli XH001]
gi|418304911|ref|ZP_12916705.1| methionyl-tRNA formyltransferase [Escherichia coli UMNF18]
gi|418956329|ref|ZP_13508257.1| methionyl-tRNA formyltransferase [Escherichia coli J53]
gi|419144364|ref|ZP_13689094.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6A]
gi|419150419|ref|ZP_13695067.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6B]
gi|419155754|ref|ZP_13700310.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6C]
gi|419157196|ref|ZP_13701730.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6D]
gi|419166154|ref|ZP_13710605.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6E]
gi|419176981|ref|ZP_13720792.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7B]
gi|419813384|ref|ZP_14338232.1| methionyl-tRNA formyltransferase [Escherichia coli O32:H37 str. P4]
gi|419940144|ref|ZP_14456898.1| methionyl-tRNA formyltransferase [Escherichia coli 75]
gi|421778034|ref|ZP_16214620.1| methionyl-tRNA formyltransferase [Escherichia coli AD30]
gi|422773592|ref|ZP_16827276.1| methionyl-tRNA formyltransferase [Escherichia coli E482]
gi|422788825|ref|ZP_16841560.1| methionyl-tRNA formyltransferase [Escherichia coli H489]
gi|422793330|ref|ZP_16846026.1| methionyl-tRNA formyltransferase [Escherichia coli TA007]
gi|422818447|ref|ZP_16866659.1| methionyl-tRNA formyltransferase [Escherichia coli M919]
gi|423702789|ref|ZP_17677221.1| methionyl-tRNA formyltransferase [Escherichia coli H730]
gi|425116841|ref|ZP_18518630.1| methionyl-tRNA formyltransferase [Escherichia coli 8.0566]
gi|425121591|ref|ZP_18523276.1| methionyl-tRNA formyltransferase [Escherichia coli 8.0569]
gi|425274478|ref|ZP_18665875.1| methionyl-tRNA formyltransferase [Escherichia coli TW15901]
gi|425285057|ref|ZP_18676086.1| methionyl-tRNA formyltransferase [Escherichia coli TW00353]
gi|425307068|ref|ZP_18696747.1| methionyl-tRNA formyltransferase [Escherichia coli N1]
gi|432366734|ref|ZP_19609851.1| methionyl-tRNA formyltransferase [Escherichia coli KTE10]
gi|432418809|ref|ZP_19661402.1| methionyl-tRNA formyltransferase [Escherichia coli KTE44]
gi|432565653|ref|ZP_19802213.1| methionyl-tRNA formyltransferase [Escherichia coli KTE51]
gi|432577514|ref|ZP_19813963.1| methionyl-tRNA formyltransferase [Escherichia coli KTE56]
gi|432628915|ref|ZP_19864883.1| methionyl-tRNA formyltransferase [Escherichia coli KTE77]
gi|432638488|ref|ZP_19874353.1| methionyl-tRNA formyltransferase [Escherichia coli KTE81]
gi|432662492|ref|ZP_19898126.1| methionyl-tRNA formyltransferase [Escherichia coli KTE111]
gi|432687100|ref|ZP_19922390.1| methionyl-tRNA formyltransferase [Escherichia coli KTE156]
gi|432688557|ref|ZP_19923827.1| methionyl-tRNA formyltransferase [Escherichia coli KTE161]
gi|432706021|ref|ZP_19941116.1| methionyl-tRNA formyltransferase [Escherichia coli KTE171]
gi|432738783|ref|ZP_19973517.1| methionyl-tRNA formyltransferase [Escherichia coli KTE42]
gi|432957138|ref|ZP_20148641.1| methionyl-tRNA formyltransferase [Escherichia coli KTE197]
gi|433049722|ref|ZP_20237056.1| methionyl-tRNA formyltransferase [Escherichia coli KTE120]
gi|442592589|ref|ZP_21010563.1| Methionyl-tRNA formyltransferase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|442599333|ref|ZP_21017053.1| Methionyl-tRNA formyltransferase [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|450251207|ref|ZP_21901755.1| methionyl-tRNA formyltransferase [Escherichia coli S17]
gi|120451|sp|P23882.4|FMT_ECOLI RecName: Full=Methionyl-tRNA formyltransferase
gi|166988365|sp|A8A592.1|FMT_ECOHS RecName: Full=Methionyl-tRNA formyltransferase
gi|189044510|sp|B1IQ12.1|FMT_ECOLC RecName: Full=Methionyl-tRNA formyltransferase
gi|229487523|sp|B1X6E0.1|FMT_ECODH RecName: Full=Methionyl-tRNA formyltransferase
gi|259646029|sp|C4ZUE2.1|FMT_ECOBW RecName: Full=Methionyl-tRNA formyltransferase
gi|581088|emb|CAA45207.1| methionyl-tRNA formyltransferase [Escherichia coli K-12]
gi|581089|emb|CAA54368.1| methionyl-tRNA formyltransferase [Escherichia coli K-12]
gi|1789683|gb|AAC76313.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|85676754|dbj|BAE78004.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K12 substr.
W3110]
gi|157068441|gb|ABV07696.1| methionyl-tRNA formyltransferase [Escherichia coli HS]
gi|169753405|gb|ACA76104.1| methionyl-tRNA formyltransferase [Escherichia coli ATCC 8739]
gi|169890643|gb|ACB04350.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|194421048|gb|EDX37077.1| methionyl-tRNA formyltransferase [Escherichia coli 101-1]
gi|226838954|gb|EEH70977.1| methionyl-tRNA formyltransferase [Escherichia sp. 1_1_43]
gi|238859732|gb|ACR61730.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli BW2952]
gi|242378814|emb|CAQ33606.1| 10-formyltetrahydrofolate:L-methionyl-tRNA[fMet]
N-formyltransferase [Escherichia coli BL21(DE3)]
gi|253322933|gb|ACT27535.1| methionyl-tRNA formyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975116|gb|ACT40787.1| methionyl-tRNA formyltransferase [Escherichia coli B str. REL606]
gi|253979272|gb|ACT44942.1| methionyl-tRNA formyltransferase [Escherichia coli BL21(DE3)]
gi|260447694|gb|ACX38116.1| methionyl-tRNA formyltransferase [Escherichia coli DH1]
gi|309703699|emb|CBJ03040.1| methionyl-tRNA formyltransferase [Escherichia coli ETEC H10407]
gi|310334828|gb|EFQ01033.1| methionyl-tRNA formyltransferase [Escherichia coli 1827-70]
gi|315137863|dbj|BAJ45022.1| methionyl-tRNA formyltransferase [Escherichia coli DH1]
gi|323939291|gb|EGB35503.1| methionyl-tRNA formyltransferase [Escherichia coli E482]
gi|323959562|gb|EGB55215.1| methionyl-tRNA formyltransferase [Escherichia coli H489]
gi|323970091|gb|EGB65365.1| methionyl-tRNA formyltransferase [Escherichia coli TA007]
gi|331036277|gb|EGI08503.1| methionyl-tRNA formyltransferase [Escherichia coli H736]
gi|332345235|gb|AEE58569.1| methionyl-tRNA formyltransferase [Escherichia coli UMNK88]
gi|339417009|gb|AEJ58681.1| methionyl-tRNA formyltransferase [Escherichia coli UMNF18]
gi|342361517|gb|EGU25653.1| methionyl-tRNA formyltransferase [Escherichia coli XH140A]
gi|344191996|gb|EGV46098.1| methionyl-tRNA formyltransferase [Escherichia coli XH001]
gi|345359908|gb|EGW92082.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_EH250]
gi|345371982|gb|EGX03950.1| methionyl-tRNA formyltransferase [Escherichia coli G58-1]
gi|359333470|dbj|BAL39917.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Escherichia coli str. K-12 substr. MDS42]
gi|377989710|gb|EHV52876.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6B]
gi|377990609|gb|EHV53767.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6A]
gi|377993431|gb|EHV56563.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6C]
gi|378007638|gb|EHV70606.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6E]
gi|378016300|gb|EHV79186.1| methionyl-tRNA formyltransferase [Escherichia coli DEC6D]
gi|378030416|gb|EHV93017.1| methionyl-tRNA formyltransferase [Escherichia coli DEC7B]
gi|384381089|gb|EIE38952.1| methionyl-tRNA formyltransferase [Escherichia coli J53]
gi|385153726|gb|EIF15754.1| methionyl-tRNA formyltransferase [Escherichia coli O32:H37 str. P4]
gi|385537853|gb|EIF84720.1| methionyl-tRNA formyltransferase [Escherichia coli M919]
gi|385709523|gb|EIG46520.1| methionyl-tRNA formyltransferase [Escherichia coli H730]
gi|386120046|gb|EIG68683.1| methionyl-tRNA formyltransferase [Escherichia sp. 4_1_40B]
gi|386222096|gb|EII44525.1| methionyl-tRNA formyltransferase [Escherichia coli 2.3916]
gi|386234805|gb|EII66781.1| methionyl-tRNA formyltransferase [Escherichia coli 2.4168]
gi|386241419|gb|EII78337.1| methionyl-tRNA formyltransferase [Escherichia coli 3.2303]
gi|386253459|gb|EIJ03149.1| methionyl-tRNA formyltransferase [Escherichia coli B41]
gi|388404236|gb|EIL64723.1| methionyl-tRNA formyltransferase [Escherichia coli 75]
gi|408190911|gb|EKI16538.1| methionyl-tRNA formyltransferase [Escherichia coli TW15901]
gi|408199663|gb|EKI24858.1| methionyl-tRNA formyltransferase [Escherichia coli TW00353]
gi|408226280|gb|EKI49929.1| methionyl-tRNA formyltransferase [Escherichia coli N1]
gi|408456939|gb|EKJ80744.1| methionyl-tRNA formyltransferase [Escherichia coli AD30]
gi|408565131|gb|EKK41222.1| methionyl-tRNA formyltransferase [Escherichia coli 8.0566]
gi|408566361|gb|EKK42433.1| methionyl-tRNA formyltransferase [Escherichia coli 8.0569]
gi|430891537|gb|ELC14063.1| methionyl-tRNA formyltransferase [Escherichia coli KTE10]
gi|430936587|gb|ELC56855.1| methionyl-tRNA formyltransferase [Escherichia coli KTE44]
gi|431090249|gb|ELD96018.1| methionyl-tRNA formyltransferase [Escherichia coli KTE51]
gi|431112608|gb|ELE16290.1| methionyl-tRNA formyltransferase [Escherichia coli KTE56]
gi|431160785|gb|ELE61286.1| methionyl-tRNA formyltransferase [Escherichia coli KTE77]
gi|431168810|gb|ELE69042.1| methionyl-tRNA formyltransferase [Escherichia coli KTE81]
gi|431197074|gb|ELE95940.1| methionyl-tRNA formyltransferase [Escherichia coli KTE111]
gi|431219535|gb|ELF16929.1| methionyl-tRNA formyltransferase [Escherichia coli KTE156]
gi|431235859|gb|ELF31073.1| methionyl-tRNA formyltransferase [Escherichia coli KTE161]
gi|431240701|gb|ELF35149.1| methionyl-tRNA formyltransferase [Escherichia coli KTE171]
gi|431279811|gb|ELF70758.1| methionyl-tRNA formyltransferase [Escherichia coli KTE42]
gi|431464707|gb|ELH44825.1| methionyl-tRNA formyltransferase [Escherichia coli KTE197]
gi|431562557|gb|ELI35856.1| methionyl-tRNA formyltransferase [Escherichia coli KTE120]
gi|441607670|emb|CCP96010.1| Methionyl-tRNA formyltransferase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441651928|emb|CCQ02550.1| Methionyl-tRNA formyltransferase [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|449315683|gb|EMD05820.1| methionyl-tRNA formyltransferase [Escherichia coli S17]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ +++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVAELQADVMVVVAYGLILP 96
>gi|2914332|pdb|1FMT|A Chain A, Methionyl-Trnafmet Formyltransferase From Escherichia Coli
gi|2914333|pdb|1FMT|B Chain B, Methionyl-Trnafmet Formyltransferase From Escherichia Coli
gi|5822477|pdb|2FMT|A Chain A, Methionyl-Trnafmet Formyltransferase Complexed With
Formyl- Methionyl-Trnafmet
gi|5822478|pdb|2FMT|B Chain B, Methionyl-Trnafmet Formyltransferase Complexed With
Formyl- Methionyl-Trnafmet
Length = 314
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 158 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 216 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 269
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 270 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 301
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 4 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ +++ D+M+V+ ILP
Sbjct: 64 QPVSLR--------PQENQQLVAELQADVMVVVAYGLILP 95
>gi|331674795|ref|ZP_08375552.1| methionyl-tRNA formyltransferase [Escherichia coli TA280]
gi|331067704|gb|EGI39102.1| methionyl-tRNA formyltransferase [Escherichia coli TA280]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKILAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|157156687|ref|YP_001464755.1| methionyl-tRNA formyltransferase [Escherichia coli E24377A]
gi|191169306|ref|ZP_03031055.1| methionyl-tRNA formyltransferase [Escherichia coli B7A]
gi|218555845|ref|YP_002388758.1| methionyl-tRNA formyltransferase [Escherichia coli IAI1]
gi|293453606|ref|ZP_06664025.1| methionyl-tRNA formyltransferase [Escherichia coli B088]
gi|307315134|ref|ZP_07594717.1| methionyl-tRNA formyltransferase [Escherichia coli W]
gi|378711273|ref|YP_005276166.1| methionyl-tRNA formyltransferase [Escherichia coli KO11FL]
gi|386610662|ref|YP_006126148.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli W]
gi|386699759|ref|YP_006163596.1| methionyl-tRNA formyltransferase [Escherichia coli KO11FL]
gi|386711180|ref|YP_006174901.1| methionyl-tRNA formyltransferase [Escherichia coli W]
gi|415830870|ref|ZP_11516668.1| methionyl-tRNA formyltransferase [Escherichia coli OK1357]
gi|416344188|ref|ZP_11678062.1| Methionyl-tRNA formyltransferase [Escherichia coli EC4100B]
gi|417147147|ref|ZP_11987994.1| methionyl-tRNA formyltransferase [Escherichia coli 1.2264]
gi|417156866|ref|ZP_11994490.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0497]
gi|417162951|ref|ZP_11998281.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0741]
gi|417222941|ref|ZP_12026381.1| methionyl-tRNA formyltransferase [Escherichia coli 96.154]
gi|417240533|ref|ZP_12036723.1| methionyl-tRNA formyltransferase [Escherichia coli 9.0111]
gi|417582895|ref|ZP_12233695.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_B2F1]
gi|417604161|ref|ZP_12254725.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_94C]
gi|417605414|ref|ZP_12255964.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_DG131-3]
gi|417668766|ref|ZP_12318306.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_O31]
gi|418040826|ref|ZP_12679059.1| methionyl-tRNA formyltransferase [Escherichia coli W26]
gi|419279924|ref|ZP_13822166.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10E]
gi|419347035|ref|ZP_13888405.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13A]
gi|419351496|ref|ZP_13892826.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13B]
gi|419356968|ref|ZP_13898215.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13C]
gi|419363204|ref|ZP_13904397.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13D]
gi|419367094|ref|ZP_13908244.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13E]
gi|419377352|ref|ZP_13918371.1| methionyl-tRNA formyltransferase [Escherichia coli DEC14B]
gi|419382690|ref|ZP_13923632.1| methionyl-tRNA formyltransferase [Escherichia coli DEC14C]
gi|419387994|ref|ZP_13928862.1| methionyl-tRNA formyltransferase [Escherichia coli DEC14D]
gi|419393435|ref|ZP_13934236.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15A]
gi|419398535|ref|ZP_13939297.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15B]
gi|419403817|ref|ZP_13944536.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15C]
gi|419408975|ref|ZP_13949660.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15D]
gi|419414525|ref|ZP_13955161.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15E]
gi|419926680|ref|ZP_14444428.1| methionyl-tRNA formyltransferase [Escherichia coli 541-1]
gi|422778148|ref|ZP_16831799.1| methionyl-tRNA formyltransferase [Escherichia coli H120]
gi|422960833|ref|ZP_16972026.1| methionyl-tRNA formyltransferase [Escherichia coli H494]
gi|425424164|ref|ZP_18805321.1| methionyl-tRNA formyltransferase [Escherichia coli 0.1288]
gi|432482608|ref|ZP_19724558.1| methionyl-tRNA formyltransferase [Escherichia coli KTE210]
gi|432676404|ref|ZP_19911852.1| methionyl-tRNA formyltransferase [Escherichia coli KTE142]
gi|432811009|ref|ZP_20044866.1| methionyl-tRNA formyltransferase [Escherichia coli KTE101]
gi|450222937|ref|ZP_21896996.1| methionyl-tRNA formyltransferase [Escherichia coli O08]
gi|166988364|sp|A7ZSH6.1|FMT_ECO24 RecName: Full=Methionyl-tRNA formyltransferase
gi|226704297|sp|B7M0Z3.1|FMT_ECO8A RecName: Full=Methionyl-tRNA formyltransferase
gi|157078717|gb|ABV18425.1| methionyl-tRNA formyltransferase [Escherichia coli E24377A]
gi|190900661|gb|EDV60461.1| methionyl-tRNA formyltransferase [Escherichia coli B7A]
gi|218362613|emb|CAR00239.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli IAI1]
gi|291321732|gb|EFE61163.1| methionyl-tRNA formyltransferase [Escherichia coli B088]
gi|306905483|gb|EFN36018.1| methionyl-tRNA formyltransferase [Escherichia coli W]
gi|315062579|gb|ADT76906.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli W]
gi|320199475|gb|EFW74065.1| Methionyl-tRNA formyltransferase [Escherichia coli EC4100B]
gi|323182766|gb|EFZ68167.1| methionyl-tRNA formyltransferase [Escherichia coli OK1357]
gi|323376834|gb|ADX49102.1| methionyl-tRNA formyltransferase [Escherichia coli KO11FL]
gi|323944292|gb|EGB40368.1| methionyl-tRNA formyltransferase [Escherichia coli H120]
gi|345334675|gb|EGW67116.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_B2F1]
gi|345347529|gb|EGW79833.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_94C]
gi|345367521|gb|EGW99562.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_DG131-3]
gi|371593612|gb|EHN82490.1| methionyl-tRNA formyltransferase [Escherichia coli H494]
gi|378124837|gb|EHW86240.1| methionyl-tRNA formyltransferase [Escherichia coli DEC10E]
gi|378183747|gb|EHX44388.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13A]
gi|378195249|gb|EHX55749.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13D]
gi|378196456|gb|EHX56942.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13C]
gi|378197340|gb|EHX57821.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13B]
gi|378210286|gb|EHX70649.1| methionyl-tRNA formyltransferase [Escherichia coli DEC13E]
gi|378216065|gb|EHX76353.1| methionyl-tRNA formyltransferase [Escherichia coli DEC14B]
gi|378224631|gb|EHX84832.1| methionyl-tRNA formyltransferase [Escherichia coli DEC14C]
gi|378228549|gb|EHX88700.1| methionyl-tRNA formyltransferase [Escherichia coli DEC14D]
gi|378235101|gb|EHX95173.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15A]
gi|378240437|gb|EHY00407.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15B]
gi|378244908|gb|EHY04849.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15C]
gi|378252771|gb|EHY12657.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15D]
gi|378257301|gb|EHY17141.1| methionyl-tRNA formyltransferase [Escherichia coli DEC15E]
gi|383391286|gb|AFH16244.1| methionyl-tRNA formyltransferase [Escherichia coli KO11FL]
gi|383406872|gb|AFH13115.1| methionyl-tRNA formyltransferase [Escherichia coli W]
gi|383476274|gb|EID68220.1| methionyl-tRNA formyltransferase [Escherichia coli W26]
gi|386163087|gb|EIH24883.1| methionyl-tRNA formyltransferase [Escherichia coli 1.2264]
gi|386165616|gb|EIH32136.1| methionyl-tRNA formyltransferase [Escherichia coli 96.0497]
gi|386173442|gb|EIH45454.1| methionyl-tRNA formyltransferase [Escherichia coli 99.0741]
gi|386202743|gb|EII01734.1| methionyl-tRNA formyltransferase [Escherichia coli 96.154]
gi|386212568|gb|EII23012.1| methionyl-tRNA formyltransferase [Escherichia coli 9.0111]
gi|388408973|gb|EIL69300.1| methionyl-tRNA formyltransferase [Escherichia coli 541-1]
gi|397783632|gb|EJK94490.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_O31]
gi|408341601|gb|EKJ56045.1| methionyl-tRNA formyltransferase [Escherichia coli 0.1288]
gi|431004224|gb|ELD19450.1| methionyl-tRNA formyltransferase [Escherichia coli KTE210]
gi|431211632|gb|ELF09593.1| methionyl-tRNA formyltransferase [Escherichia coli KTE142]
gi|431360171|gb|ELG46782.1| methionyl-tRNA formyltransferase [Escherichia coli KTE101]
gi|449314430|gb|EMD04596.1| methionyl-tRNA formyltransferase [Escherichia coli O08]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|421728648|ref|ZP_16167800.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca M5al]
gi|410370557|gb|EKP25286.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca M5al]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL L +I+T+K++ K + ++ + ++A + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLANLGPQGLIETLKQLAAGTAKPVVQDEALV--THAQKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P +I + +K+W+A A+ + +PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWIEIDGQP--VKVWQASAIDTATKAEPGTILEAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G V+ LL LQ KK +SA + +N
Sbjct: 271 RGIQVATGDGVLNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEQGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP SL+ E +L++ + D+M+V+
Sbjct: 65 QPASLR--------PQENQQLVSDLRADVMVVV 89
>gi|417842406|ref|ZP_12488492.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M21127]
gi|341951697|gb|EGT78255.1| Methionyl-tRNA formyltransferase [Haemophilus haemolyticus M21127]
Length = 318
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPNETSTSLYNKLAELAPSALIDVLDNLES--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDWS A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 DNQSNYAEKLSKEEAQLDWSFPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI V V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQVATVDGVLNLLQLQPAGKKPMSALDLLNG 306
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNITVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|432877350|ref|ZP_20095070.1| methionyl-tRNA formyltransferase [Escherichia coli KTE154]
gi|431418052|gb|ELH00466.1| methionyl-tRNA formyltransferase [Escherichia coli KTE154]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL E +L+ +++ D+M+V+ ILP
Sbjct: 65 QPVSLH--------PQENQQLVAELQADVMVVVAYGLILP 96
>gi|427806480|ref|ZP_18973547.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet )
N-formyltransferase [Escherichia coli chi7122]
gi|412964662|emb|CCK48591.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet )
N-formyltransferase [Escherichia coli chi7122]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|188492657|ref|ZP_02999927.1| methionyl-tRNA formyltransferase [Escherichia coli 53638]
gi|432487044|ref|ZP_19728952.1| methionyl-tRNA formyltransferase [Escherichia coli KTE212]
gi|432672371|ref|ZP_19907894.1| methionyl-tRNA formyltransferase [Escherichia coli KTE119]
gi|433175168|ref|ZP_20359680.1| methionyl-tRNA formyltransferase [Escherichia coli KTE232]
gi|188487856|gb|EDU62959.1| methionyl-tRNA formyltransferase [Escherichia coli 53638]
gi|431013757|gb|ELD27479.1| methionyl-tRNA formyltransferase [Escherichia coli KTE212]
gi|431208157|gb|ELF06379.1| methionyl-tRNA formyltransferase [Escherichia coli KTE119]
gi|431689603|gb|ELJ55106.1| methionyl-tRNA formyltransferase [Escherichia coli KTE232]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ +++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVAELQADVMVVVAYGLILP 96
>gi|304313373|ref|YP_003812971.1| methionyl-tRNA formyltransferase [gamma proteobacterium HdN1]
gi|301799106|emb|CBL47349.1| Methionyl-tRNA formyltransferase [gamma proteobacterium HdN1]
Length = 334
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 134/318 (42%), Gaps = 86/318 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYN---SEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI 57
+KI+FAGT AA IL+ L + + I+ T+PD +GRG KL+ SPVK A H I
Sbjct: 3 LKIVFAGTPDFAATILEALLTQVPASNPIIACYTQPDRPAGRGRKLSASPVKVLAESHQI 62
Query: 58 KIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE---------------- 98
+ QP++ + +A +++ D+MIV+ ILP+
Sbjct: 63 PVFQPLNFRDPAAIDALA--------ELQPDLMIVVAYGLILPQRVLDIPRYGCINVHAS 114
Query: 99 --------------------DTSLTLQNKLEKL----------SKILIIDTIKKIEYDMT 128
+T +TL L + IL DT + +
Sbjct: 115 LLPRWRGAAPIQRALMAGDAETGVTLMQMEAGLDTGPMLSKVHTPILDTDTSASLHDRLA 174
Query: 129 KLFFK---------PQSNI---------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFN 170
L + P+S I YA + K+E++LDW+ A + ++I N
Sbjct: 175 TLGAQAMVDLLKNFPESGIFAATRQNDHEACYAQKLHKDESLLDWTQPASALCQQIRGLN 234
Query: 171 PFPGAKTYYISYQNKKKFLKIWKAHA--LSIESTKKPGTILNVNFHNGILVVCGKNVIKL 228
P+P A + Q + ++IW A A + + + PGTIL + +GI V G+ + L
Sbjct: 235 PWPVAGS-----QLGGETVRIWNATAKPETSRAPQAPGTILQAD-ASGIEVSTGEGSLVL 288
Query: 229 LELQKNNKKKISATEFIN 246
ELQ K +SA + +N
Sbjct: 289 TELQLPGGKALSAAQLLN 306
>gi|218702050|ref|YP_002409679.1| methionyl-tRNA formyltransferase [Escherichia coli IAI39]
gi|386626091|ref|YP_006145819.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O7:K1 str. CE10]
gi|226704296|sp|B7NLK7.1|FMT_ECO7I RecName: Full=Methionyl-tRNA formyltransferase
gi|218372036|emb|CAR19896.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli IAI39]
gi|349739827|gb|AEQ14533.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 315
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|429505124|ref|YP_007186308.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429486714|gb|AFZ90638.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 317
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 69/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK A +H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLF---- 131
T +T+ +EKL +I I ++E D T KL
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSIAGAKLLSETV 181
Query: 132 -------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
KP Q +YAP IK+ + +DW+ + I +I NP+P A T + +
Sbjct: 182 PNVISGNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYTTF-NG 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISA 241
QN +K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++
Sbjct: 241 QN----MKVWASEKVAAKTEAAPGTVIRTE-QNGIVVASGNSTALLITELQPAGKKRMKG 295
Query: 242 TEFINGCIKNIKY 254
+F+ G KN+++
Sbjct: 296 EDFVRG--KNVQH 306
>gi|417674230|ref|ZP_12323665.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 155-74]
gi|332086259|gb|EGI91415.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 155-74]
Length = 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVVDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|218550563|ref|YP_002384354.1| methionyl-tRNA formyltransferase [Escherichia fergusonii ATCC
35469]
gi|422807221|ref|ZP_16855651.1| methionyl-tRNA formyltransferase [Escherichia fergusonii B253]
gi|226704300|sp|B7LRQ4.1|FMT_ESCF3 RecName: Full=Methionyl-tRNA formyltransferase
gi|218358104|emb|CAQ90751.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia fergusonii ATCC 35469]
gi|324111966|gb|EGC05945.1| methionyl-tRNA formyltransferase [Escherichia fergusonii B253]
Length = 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGGGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|209920753|ref|YP_002294837.1| methionyl-tRNA formyltransferase [Escherichia coli SE11]
gi|422763834|ref|ZP_16817588.1| methionyl-tRNA formyltransferase [Escherichia coli E1167]
gi|433093663|ref|ZP_20279919.1| methionyl-tRNA formyltransferase [Escherichia coli KTE138]
gi|238065928|sp|B6I201.1|FMT_ECOSE RecName: Full=Methionyl-tRNA formyltransferase
gi|209914012|dbj|BAG79086.1| methionyl-tRNA formyltransferase [Escherichia coli SE11]
gi|324116323|gb|EGC10243.1| methionyl-tRNA formyltransferase [Escherichia coli E1167]
gi|431608020|gb|ELI77372.1| methionyl-tRNA formyltransferase [Escherichia coli KTE138]
Length = 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVSVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|423470080|ref|ZP_17446824.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG6O-2]
gi|402437332|gb|EJV69356.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG6O-2]
Length = 314
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 129/307 (42%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYRCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + ++DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLAG- 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
+ +K+W +SI +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 241 ----QVIKVWWGEKISITEKAEPGTIVALE-EDGFVVATGNETGVKITELQTSGKKRMSC 295
Query: 242 TEFINGC 248
++F+ G
Sbjct: 296 SQFLRGT 302
>gi|400405858|ref|YP_006588717.1| methionyl-tRNA formyltransferase [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400364221|gb|AFP85289.1| methionyl-tRNA formyltransferase [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 316
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 132/309 (42%), Gaps = 71/309 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVK----------- 49
++IIF+GT AA L L +S+H +V + T+PD +GRG +L S VK
Sbjct: 5 LRIIFSGTPEFAARHLKALIHSKHQVVGVFTQPDRPAGRGNRLTASAVKQLAERYRLSVF 64
Query: 50 ------KYALKHSIK--------------IIQPISLKLN------------GKYHKIANE 77
KY ++ I I+ P+ L L ++ A
Sbjct: 65 QPTLLRKYEVRQFIASLKADIMVVVAYGLILPPVMLNLPRLGCINVHGSLLPRWRGAAPI 124
Query: 78 THKLL---NKIEFDIM--------------IVMGILPEDTSLTLQNKLEKLSKILIIDTI 120
LL ++ IM V I P DTS +L NK + ++ T+
Sbjct: 125 QRALLAGDDQTGVTIMQMDAGLDTGAILHKTVFPIQPNDTSASLYNKCGGVGPAALLSTL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+K+ +++ + Q N +YA I K EA LDW LSA + R I AFNP+P I
Sbjct: 185 EKLAE--SRVVAELQDNALATYADKITKKEARLDWRLSAAQLERYIRAFNPWP------I 236
Query: 181 SY-QNKKKFLKIWKAHALSIESTKK-PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
SY + +K+W A ++ PGTI+ + GI + G+ V+ L +LQ KK
Sbjct: 237 SYFPLSGQPIKVWAASVDDRQTAACIPGTIVAAD-KAGIHIATGEGVLTLTKLQLAGKKV 295
Query: 239 ISATEFING 247
I + +N
Sbjct: 296 IPVQDLLNA 304
>gi|325983532|ref|YP_004295934.1| methionyl-tRNA formyltransferase [Nitrosomonas sp. AL212]
gi|325533051|gb|ADZ27772.1| methionyl-tRNA formyltransferase [Nitrosomonas sp. AL212]
Length = 313
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
M I +D++ +L ++L L + I++ + ++ KL Q+ YA I K EA
Sbjct: 153 MKIASDDSTQSLHDRLSLLGALSIVEAL--VQLQQGKLVSVVQNETEACYANKITKTEAE 210
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
+DW L A+ I R + AFNP PGA Y S+Q +KIW+A ++ ES ++PG I+ VN
Sbjct: 211 IDWRLPAEQIDRVVRAFNPTPGA---YTSFQG--MVIKIWQAKIIAGES-RQPGEIVAVN 264
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI+V CG ++++ LQK +K++ F+ G
Sbjct: 265 -REGIVVACGSGLLQVEMLQKPGGRKMNVANFLTG 298
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKIIFAGT + AA L+ L ++ H IV++LT+PD +GRGMK S VK A + + I+
Sbjct: 1 MKIIFAGTPVFAATALEGLIHAGHQIVMVLTQPDRPAGRGMKTVASAVKVLAQQQHLAIL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QPI+L+ E L + D+MIV ILP+
Sbjct: 61 QPITLR--------TPEIQAQLEALRADVMIVAAYGLILPQ 93
>gi|343511701|ref|ZP_08748856.1| methionyl-tRNA formyltransferase [Vibrio scophthalmi LMG 19158]
gi|343515775|ref|ZP_08752825.1| methionyl-tRNA formyltransferase [Vibrio sp. N418]
gi|342797436|gb|EGU33086.1| methionyl-tRNA formyltransferase [Vibrio scophthalmi LMG 19158]
gi|342797731|gb|EGU33372.1| methionyl-tRNA formyltransferase [Vibrio sp. N418]
Length = 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ T PD +GRG KL S VK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAALHLAALLSSEHEVIAAYTNPDRPAGRGKKLTASAVKNVALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQQLADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L + +++ +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKVATLPIEASDTSSSMYAKLAELGPVALVECL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I T + K + +YA + K EA +DW+ A I R + AFNP+P +
Sbjct: 185 NDIAAG-TAVAVKQDDELA-NYAKKLSKEEARIDWNDDAAHIERCVRAFNPWPMSH---- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ + +K+W++ + GTI+ + GI V G V+ L +LQ KK +S
Sbjct: 239 -FEVAENSIKVWQSRVADQSCDQPAGTIIQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|429111891|ref|ZP_19173661.1| Methionyl-tRNA formyltransferase [Cronobacter malonaticus 507]
gi|426313048|emb|CCJ99774.1| Methionyl-tRNA formyltransferase [Cronobacter malonaticus 507]
Length = 283
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 113/284 (39%), Gaps = 80/284 (28%)
Query: 29 ILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFD 88
+ T+PD +GRG KL PVK A ++ I + QP SL+ E +L+ + D
Sbjct: 1 MFTQPDRPAGRGKKLMPGPVKVLAQENDIPVFQPKSLR--------PAENQELVAALNAD 52
Query: 89 IMIVMG---ILPE---------------------------------------------DT 100
+M+V+ ILPE D
Sbjct: 53 VMVVVAYGLILPEAVLAMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDK 112
Query: 101 SLTLQNKLEKLSKILIIDTIKKIEYD------------------MTKLFFKPQSNIGESY 142
L + L KLS + D YD + + Q ++ +Y
Sbjct: 113 GLDTGDMLRKLSCPITDDDTSASLYDKLAQLGPQGLLATLEDLAAGRAVPEKQDDVQATY 172
Query: 143 APLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIEST 202
A + K EA LDW+LSA + R I AFNP+P + I Q +K+WKA + +S
Sbjct: 173 AEKLSKEEARLDWTLSAVQLERCIRAFNPWP-VSFFMIDEQP----VKVWKASVIHQQSN 227
Query: 203 KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
PGTIL+ GI + ++ L ELQ KK +SA + +N
Sbjct: 228 AAPGTILDAG-KQGIQIATTDGILNLEELQPAGKKPMSAQDLLN 270
>gi|423452833|ref|ZP_17429686.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG5X1-1]
gi|423558571|ref|ZP_17534873.1| methionyl-tRNA formyltransferase [Bacillus cereus MC67]
gi|401139392|gb|EJQ46954.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG5X1-1]
gi|401191839|gb|EJQ98861.1| methionyl-tRNA formyltransferase [Bacillus cereus MC67]
Length = 314
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYRCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + ++DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLAG- 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
+ +K+W +SI +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 241 ----QVIKVWWGEKISITEKAEPGTIVALE-EDGFVVATGNETGVKITELQPSGKKRMSC 295
Query: 242 TEFINGCIKNI 252
++F+ G I
Sbjct: 296 SQFLRGTKPEI 306
>gi|271502214|ref|YP_003335240.1| methionyl-tRNA formyltransferase [Dickeya dadantii Ech586]
gi|270345769|gb|ACZ78534.1| methionyl-tRNA formyltransferase [Dickeya dadantii Ech586]
Length = 313
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 98/170 (57%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KIE I LP+DTS +L +KL KL +++T+ + +++ + Q
Sbjct: 145 DTGAMLHKIECPI------LPDDTSASLYDKLAKLGPQGLLETLAHLSS--SQVTAQVQD 196
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA L+W LSA+ + R I AFNP+P +Y++ +++ +K+WKA A
Sbjct: 197 DSLATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWP--VSYFLV---EEQPVKVWKAKA 251
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L + ++PGT+L + GI V ++ + LQ + KK +SA + +N
Sbjct: 252 LDTQHQQQPGTVLAAD-KEGISVATANGILNIQILQPSGKKAMSAQDLLN 300
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +SEH +V + T+PD +GRG KL SPVK A +H I +
Sbjct: 3 LRIIFAGTPDFAAQHLAALLSSEHEVVGVFTQPDRPAGRGNKLTPSPVKVLAEQHGIPVF 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ +E +++ + D+M+V+ ILP+
Sbjct: 63 QPKSLR--------PSENQQIVAGLNADVMVVVAYGLILPQ 95
>gi|420322255|ref|ZP_14824078.1| methionyl-tRNA formyltransferase [Shigella flexneri 2850-71]
gi|391246045|gb|EIQ05309.1| methionyl-tRNA formyltransferase [Shigella flexneri 2850-71]
Length = 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDRILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEEGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|419918769|ref|ZP_14436947.1| methionyl-tRNA formyltransferase [Escherichia coli KD2]
gi|432393879|ref|ZP_19636701.1| methionyl-tRNA formyltransferase [Escherichia coli KTE21]
gi|388389538|gb|EIL51065.1| methionyl-tRNA formyltransferase [Escherichia coli KD2]
gi|430915091|gb|ELC36175.1| methionyl-tRNA formyltransferase [Escherichia coli KTE21]
Length = 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTTTNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|152994059|ref|YP_001338894.1| methionyl-tRNA formyltransferase [Marinomonas sp. MWYL1]
gi|150834983|gb|ABR68959.1| methionyl-tRNA formyltransferase [Marinomonas sp. MWYL1]
Length = 332
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 134/317 (42%), Gaps = 79/317 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYN--------SEHNIVLILTKPDLHSGRGMKLNFSPVKKYA 52
++IIFAGT AAA L L +++ IV + T+PD +GRG KL SPVK+ A
Sbjct: 6 LRIIFAGTPEFAAASLQALLTKMKDSNAENQYEIVGVYTQPDRPAGRGQKLVQSPVKQLA 65
Query: 53 LKHSIKIIQPISLKLN-------------------------------------------- 68
+ + I + QP++ K +
Sbjct: 66 IVNDIPVYQPLNFKQDEDKAQLAALEADLMIVAAYGIILPKVVLDTPKFGCINVHASLLP 125
Query: 69 -----GKYHK--IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLS 112
H+ IA + + ++ D+ + G I P DTS TL ++L L
Sbjct: 126 RWRGAAPIHRSLIAGDGETGITIMQMDVGLDTGDMLLKAYCDIKPTDTSETLHDRLAVLG 185
Query: 113 KILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172
+I+ ++K + L + Q YA + K E ++WS SA+ I R+I +P+
Sbjct: 186 GSTLIEALEK--FKAGTLVPEQQDESLTCYAAKLTKQEGNVNWSSSAELIERQIRGLSPW 243
Query: 173 PGAKTYYISYQNK-KKFLKIWKAHALSI-ESTKKPGTILNVNFHNGILVVCGKNVIKLLE 230
P ++Y N +KI AH S+ + PG IL V+ GI+V G+ I + E
Sbjct: 244 P------VAYTNSLAGVMKIHAAHIASVSDEASTPGDILVVS-KEGIIVATGQGSILITE 296
Query: 231 LQKNNKKKISATEFING 247
+Q K++ + +NG
Sbjct: 297 IQFAGGKRMKVQDALNG 313
>gi|427823277|ref|ZP_18990339.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica Bbr77]
gi|410588542|emb|CCN03601.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica Bbr77]
Length = 312
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+ T+ L ++L ++ I+D + + L + Q + G +YA + K EA LD SL
Sbjct: 166 QQTAAQLHDELARVGGQAIVDALAALA--QGGLAPRRQPDAGVTYAAKLDKAEAALDCSL 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP PGA + +K+W+A AL + PG +L + GI
Sbjct: 224 PAAVLARRVRAFNPVPGATIRLPGLDDP---VKVWRAQALEQAAGGTPGVVLRADAQ-GI 279
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V++LLELQK K+ F+ G
Sbjct: 280 DIATGQGVLRLLELQKAGGKRQPVDVFVRG 309
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD L + H++ L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAGRGLKLTPSPVKQAALAAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A L + D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAAARAQLEHVAPDVMVVAAYGLILPQ 101
>gi|229098335|ref|ZP_04229282.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-29]
gi|229117352|ref|ZP_04246730.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock1-3]
gi|423378295|ref|ZP_17355579.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG1O-2]
gi|423441403|ref|ZP_17418309.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG4X2-1]
gi|423464477|ref|ZP_17441245.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG6O-1]
gi|423533819|ref|ZP_17510237.1| methionyl-tRNA formyltransferase [Bacillus cereus HuB2-9]
gi|423540912|ref|ZP_17517303.1| methionyl-tRNA formyltransferase [Bacillus cereus HuB4-10]
gi|423547150|ref|ZP_17523508.1| methionyl-tRNA formyltransferase [Bacillus cereus HuB5-5]
gi|423623058|ref|ZP_17598836.1| methionyl-tRNA formyltransferase [Bacillus cereus VD148]
gi|228666252|gb|EEL21716.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock1-3]
gi|228685233|gb|EEL39164.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-29]
gi|401172100|gb|EJQ79321.1| methionyl-tRNA formyltransferase [Bacillus cereus HuB4-10]
gi|401178871|gb|EJQ86044.1| methionyl-tRNA formyltransferase [Bacillus cereus HuB5-5]
gi|401259831|gb|EJR66005.1| methionyl-tRNA formyltransferase [Bacillus cereus VD148]
gi|401636561|gb|EJS54315.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG1O-2]
gi|402418064|gb|EJV50364.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG4X2-1]
gi|402420744|gb|EJV53015.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG6O-1]
gi|402464038|gb|EJV95738.1| methionyl-tRNA formyltransferase [Bacillus cereus HuB2-9]
Length = 314
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEADLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + +DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQNEDEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTL--- 238
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
++ +K+W +S+E+ +PGTI+ + +G +V G + +K+ ELQ + KK++S
Sbjct: 239 --AEQVVKVWWGEKVSLEAKAEPGTIVGLE-EDGFVVATGNEIGVKITELQPSGKKRMSC 295
Query: 242 TEFINGC 248
++F+ G
Sbjct: 296 SQFLRGT 302
>gi|423483456|ref|ZP_17460146.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG6X1-2]
gi|401141007|gb|EJQ48562.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG6X1-2]
Length = 314
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYRCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + ++DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLAG- 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
+ +K+W +SI +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 241 ----QVIKVWWGEKVSITEKAEPGTIVALE-EDGFVVATGNETGVKITELQPSGKKRMSC 295
Query: 242 TEFINGCIKNI 252
++F+ G I
Sbjct: 296 SQFLRGTKPEI 306
>gi|238019377|ref|ZP_04599803.1| hypothetical protein VEIDISOL_01241 [Veillonella dispar ATCC 17748]
gi|237864076|gb|EEP65366.1| hypothetical protein VEIDISOL_01241 [Veillonella dispar ATCC 17748]
Length = 325
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 130/326 (39%), Gaps = 100/326 (30%)
Query: 7 GTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLK 66
GT + L+ L + H+IV + +PD GRG ++ PVK ALKH++ + QP++L+
Sbjct: 2 GTPDFSVPTLEALIKAGHSIVGVYCQPDKQKGRGKQVQMPPVKVAALKHNLPVFQPVTLR 61
Query: 67 LNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILPE----- 98
+ L ++ D+++V+ ILP+
Sbjct: 62 --------DEQVQAELEALQPDVVVVIAYGKILPPWLIRLPQYGCINVHASILPKYRGAA 113
Query: 99 -----------DTSLTLQNKLEKLSKILIIDTIKK--IEYDMTKLFFK------------ 133
T +T+ + + L IID ++ + + T F+
Sbjct: 114 PIHYAILNGDTKTGVTIMHMDDGLDTGDIIDIVETDILPGETTGQLFERMAVLGGETIVP 173
Query: 134 -------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
PQ + ++ I K +DWS A I+ I NP PG TY
Sbjct: 174 VLTRWVNGEIVAIPQDDTMATHTAKITKEMGHIDWSKPANEIVNLIRGLNPTPGCYTYL- 232
Query: 181 SYQNKKKFLKIWKA--------HAL----------SIESTKKPGTILNVNFHNGILVVCG 222
K LK+W H L +I +T PGTI V+ G+ V CG
Sbjct: 233 ----DGKRLKVWSGEVVPSDTTHCLIDVHGKHVPIAISATTVPGTI--VSKTAGLGVFCG 286
Query: 223 K-NVIKLLELQKNNKKKISATEFING 247
N++ L E+Q NKK+ISAT+FING
Sbjct: 287 DGNILLLTEVQPENKKRISATDFING 312
>gi|229846678|ref|ZP_04466786.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 7P49H1]
gi|229810771|gb|EEP46489.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 7P49H1]
Length = 318
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E +K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--SKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPVGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKLMSAQDLLNG 306
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|432720409|ref|ZP_19955373.1| methionyl-tRNA formyltransferase [Escherichia coli KTE9]
gi|431260444|gb|ELF52541.1| methionyl-tRNA formyltransferase [Escherichia coli KTE9]
Length = 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTGTNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|300921904|ref|ZP_07138059.1| methionyl-tRNA formyltransferase [Escherichia coli MS 182-1]
gi|301325147|ref|ZP_07218679.1| methionyl-tRNA formyltransferase [Escherichia coli MS 78-1]
gi|309794563|ref|ZP_07688985.1| methionyl-tRNA formyltransferase [Escherichia coli MS 145-7]
gi|417598682|ref|ZP_12249309.1| methionyl-tRNA formyltransferase [Escherichia coli 3030-1]
gi|300421705|gb|EFK05016.1| methionyl-tRNA formyltransferase [Escherichia coli MS 182-1]
gi|300847979|gb|EFK75739.1| methionyl-tRNA formyltransferase [Escherichia coli MS 78-1]
gi|308121613|gb|EFO58875.1| methionyl-tRNA formyltransferase [Escherichia coli MS 145-7]
gi|345349553|gb|EGW81834.1| methionyl-tRNA formyltransferase [Escherichia coli 3030-1]
Length = 268
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 112 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 170 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 223
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 224 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 255
>gi|161610403|ref|NP_882603.2| methionyl-tRNA formyltransferase [Bordetella parapertussis 12822]
gi|39931246|sp|Q7W1V2.2|FMT_BORPA RecName: Full=Methionyl-tRNA formyltransferase
Length = 312
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD L + H++ L+LT+PD +GRG+KL SPVK+ AL I +
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAGRGLKLTPSPVKQAALAAGIGVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y A L ++ D+M+V ILP+
Sbjct: 61 QPRSLRLDGRYPDEAAAARAQLERVAPDVMVVAAYGLILPQ 101
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+ T+ L ++L I+D + + L + Q + G +YA + K EA LD SL
Sbjct: 166 QQTAAQLHDELALAGGQAIVDALAAL--GQGGLAPRRQPDAGVTYAAKLDKAEAALDCSL 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP PGA + +K+W+A AL + PG +L + GI
Sbjct: 224 PAAVLARRVRAFNPVPGATIRLPGLDDP---VKVWRAQALEQAAGGPPGAVLRADAQ-GI 279
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V++LLELQK K+ F+ G
Sbjct: 280 DIATGQGVLRLLELQKAGGKRQPVDVFVRG 309
>gi|312898701|ref|ZP_07758091.1| methionyl-tRNA formyltransferase [Megasphaera micronuciformis
F0359]
gi|310620620|gb|EFQ04190.1| methionyl-tRNA formyltransferase [Megasphaera micronuciformis
F0359]
Length = 311
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT + L+ + + H +V ++T+PD GRG ++FSPVK+ AL+ + ++
Sbjct: 1 MKILFMGTPDFSVPSLEAVVAAGHEVVAVVTQPDKQRGRGKTVSFSPVKEKALELGLPVL 60
Query: 61 QPISLK-------------------------------------------LNGKYHKIANE 77
QP S++ L KY A
Sbjct: 61 QPESVRDESVIKTLTDLQAQIIVVIAYGKILPSQILTAAPYGCINIHASLLPKYRGAAPI 120
Query: 78 THKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTI 120
+ +LN E+ + +M + P++T+ +L KL L K +++ +
Sbjct: 121 QYAVLNGDEYSGISIMKLDEGMDTGDVLLQEKIRLAPDETTGSLFEKLSLLGKDVLLKVL 180
Query: 121 KKIE-YDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ Y+ + Q++ +Y I K+ A ++W A I R + P PGA T++
Sbjct: 181 ADPDSYEKNAVR---QNHKAATYTQKIDKSMARINWQEDAIVIERTVRTLEPSPGAYTFW 237
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
KK LKI AHA+ + PGT+++V+ + V G +K+ +Q ++K +
Sbjct: 238 -----DKKRLKIHGAHAVQASTDNAPGTVISVS-KSDFTVQTGAGALKVTSVQPESRKTM 291
Query: 240 SATEFIN 246
++ +F+
Sbjct: 292 TSAQFLQ 298
>gi|416899676|ref|ZP_11929082.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_7v]
gi|417117594|ref|ZP_11968455.1| methionyl-tRNA formyltransferase [Escherichia coli 1.2741]
gi|422801225|ref|ZP_16849721.1| methionyl-tRNA formyltransferase [Escherichia coli M863]
gi|323966249|gb|EGB61684.1| methionyl-tRNA formyltransferase [Escherichia coli M863]
gi|327250936|gb|EGE62629.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_7v]
gi|386140138|gb|EIG81293.1| methionyl-tRNA formyltransferase [Escherichia coli 1.2741]
Length = 315
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R + AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCVRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGGGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|300932180|ref|ZP_07147460.1| methionyl-tRNA formyltransferase [Escherichia coli MS 187-1]
gi|300946509|ref|ZP_07160775.1| methionyl-tRNA formyltransferase [Escherichia coli MS 116-1]
gi|300955325|ref|ZP_07167707.1| methionyl-tRNA formyltransferase [Escherichia coli MS 175-1]
gi|301643893|ref|ZP_07243923.1| methionyl-tRNA formyltransferase [Escherichia coli MS 146-1]
gi|386706530|ref|YP_006170377.1| Methionyl-tRNA formyltransferase [Escherichia coli P12b]
gi|300317769|gb|EFJ67553.1| methionyl-tRNA formyltransferase [Escherichia coli MS 175-1]
gi|300453815|gb|EFK17435.1| methionyl-tRNA formyltransferase [Escherichia coli MS 116-1]
gi|300460064|gb|EFK23557.1| methionyl-tRNA formyltransferase [Escherichia coli MS 187-1]
gi|301077736|gb|EFK92542.1| methionyl-tRNA formyltransferase [Escherichia coli MS 146-1]
gi|383104698|gb|AFG42207.1| Methionyl-tRNA formyltransferase [Escherichia coli P12b]
Length = 268
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 112 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 170 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 223
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 224 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 255
>gi|422768925|ref|ZP_16822649.1| methionyl-tRNA formyltransferase [Escherichia coli E1520]
gi|323934514|gb|EGB30922.1| methionyl-tRNA formyltransferase [Escherichia coli E1520]
Length = 315
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKKEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ +++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVAELQADVMVVVAYGLILP 96
>gi|451979962|ref|ZP_21928364.1| Methionyl-tRNA formyltransferase [Nitrospina gracilis 3/211]
gi|451762834|emb|CCQ89582.1| Methionyl-tRNA formyltransferase [Nitrospina gracilis 3/211]
Length = 318
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI--- 57
M ++F GT A L L+ S H + ++T+PD GRG PVK++AL H +
Sbjct: 1 MNLVFLGTPDFAVPTLKALHASRHTVQAVVTQPDRPKGRGRAAQPPPVKEFALAHGLDVL 60
Query: 58 ----------------------------KIIQPISLKLN------------GKYHKIA-- 75
++++P L+L KY A
Sbjct: 61 QPTKASAPDFVEQLRPMKPDLIVVIAYGQLLKPNFLELPKHFCMNIHASILPKYRGAAPI 120
Query: 76 ------NETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
ET + ++ D + G I P+DT+ L + L L +++I
Sbjct: 121 NWAIINGETETGVTTMKIDPGLDSGDMLLIRKVPIGPDDTAQDLHDALADAGAKLALESI 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++E L PQ + ++A +KK + + W+ SA+ + + NP+PGA T+
Sbjct: 181 DQLE--AGTLPIAPQDHDEATFARKLKKEDGFICWTQSAQRLHDLVRGLNPWPGAYTFLN 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ LK++K + + G ++ V H GI V + + L ELQ KKK++
Sbjct: 239 GHR-----LKLYKTETAPRQQKDEAGRVMRVTKH-GIEVATSDDRLILTELQPEGKKKMN 292
Query: 241 ATEFING 247
A +F+ G
Sbjct: 293 AQDFLAG 299
>gi|300815502|ref|ZP_07095727.1| methionyl-tRNA formyltransferase [Escherichia coli MS 107-1]
gi|300822909|ref|ZP_07103045.1| methionyl-tRNA formyltransferase [Escherichia coli MS 119-7]
gi|300903536|ref|ZP_07121458.1| methionyl-tRNA formyltransferase [Escherichia coli MS 84-1]
gi|300918262|ref|ZP_07134866.1| methionyl-tRNA formyltransferase [Escherichia coli MS 115-1]
gi|301305497|ref|ZP_07211589.1| methionyl-tRNA formyltransferase [Escherichia coli MS 124-1]
gi|415862910|ref|ZP_11536271.1| methionyl-tRNA formyltransferase [Escherichia coli MS 85-1]
gi|415879131|ref|ZP_11544591.1| methionyl-tRNA formyltransferase [Escherichia coli MS 79-10]
gi|422354169|ref|ZP_16434912.1| methionyl-tRNA formyltransferase [Escherichia coli MS 117-3]
gi|300404409|gb|EFJ87947.1| methionyl-tRNA formyltransferase [Escherichia coli MS 84-1]
gi|300414523|gb|EFJ97833.1| methionyl-tRNA formyltransferase [Escherichia coli MS 115-1]
gi|300524675|gb|EFK45744.1| methionyl-tRNA formyltransferase [Escherichia coli MS 119-7]
gi|300532394|gb|EFK53456.1| methionyl-tRNA formyltransferase [Escherichia coli MS 107-1]
gi|300839192|gb|EFK66952.1| methionyl-tRNA formyltransferase [Escherichia coli MS 124-1]
gi|315255871|gb|EFU35839.1| methionyl-tRNA formyltransferase [Escherichia coli MS 85-1]
gi|324017856|gb|EGB87075.1| methionyl-tRNA formyltransferase [Escherichia coli MS 117-3]
gi|342927010|gb|EGU95732.1| methionyl-tRNA formyltransferase [Escherichia coli MS 79-10]
Length = 268
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 112 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 170 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 223
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 224 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 255
>gi|300896635|ref|ZP_07115152.1| methionyl-tRNA formyltransferase [Escherichia coli MS 198-1]
gi|300359512|gb|EFJ75382.1| methionyl-tRNA formyltransferase [Escherichia coli MS 198-1]
Length = 268
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 112 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 170 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 223
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 224 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 255
>gi|300781121|ref|ZP_07090975.1| methionyl-tRNA formyltransferase [Corynebacterium genitalium ATCC
33030]
gi|300532828|gb|EFK53889.1| methionyl-tRNA formyltransferase [Corynebacterium genitalium ATCC
33030]
Length = 315
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 69/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L L S+H +V +LT+PD GRG L+ SPVK A++H I+++
Sbjct: 1 MRLIFAGTPEPAVVALQKLIASDHEVVAVLTRPDAKKGRGRTLHPSPVKALAMEHGIEVL 60
Query: 61 QPISLKLNGKYHK-----------------------IANETHKLLNKIEFDIM------- 90
P +L+ N + H +A H +N + F ++
Sbjct: 61 TPETLRGNEEVHARLTELAPDAIPVVAYGNLIPKDFLAIPRHGWIN-LHFSLLPQWRGAA 119
Query: 91 -IVMGILPED-----TSLTLQNKLE-------KLSKILIIDT----IKKIEYDMTKLFFK 133
+ GIL D T+ + L+ + +I DT + ++ YD L +
Sbjct: 120 PVQAGILHGDEFGGATTFRIDQGLDTGDIIGQQREEIRATDTADDLLTRLAYDGADLLVR 179
Query: 134 PQSNI-----------GES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
++ GE+ YAP I K++A +DW SA I R + A P PGA T
Sbjct: 180 TMDDLESGAATFTLQEGEATYAPKITKDDARIDWQSSAAEIDRAVRAHTPGPGAWTTL-- 237
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
+ K I +H PG + + + V G + L +Q KK + A
Sbjct: 238 DDARYKVGPITPSH-----EQLAPGHVAISK--DEVRVGTGDGSVVLGMIQPPGKKMMRA 290
Query: 242 TEFING 247
T++ G
Sbjct: 291 TDWARG 296
>gi|83309341|ref|YP_419605.1| methionyl-tRNA formyltransferase [Magnetospirillum magneticum
AMB-1]
gi|123727054|sp|Q2WAS9.1|FMT_MAGMM RecName: Full=Methionyl-tRNA formyltransferase
gi|82944182|dbj|BAE49046.1| Methionyl-tRNA formyltransferase [Magnetospirillum magneticum
AMB-1]
Length = 305
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 121/314 (38%), Gaps = 86/314 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + ILD+L + H ++ + ++P +GRG K +PV +A + I +
Sbjct: 1 MKLVFMGTPDFSVPILDSLIEAGHQVICVYSQPPRPAGRGHKEQLTPVHAFAHERGIPVR 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
P SLK E +E D+ +V ILP+
Sbjct: 61 TPKSLK--------PAEAQAEFAALEADVAVVAAYGLILPQAVLDAPRLGCLNVHASLLP 112
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF- 131
D L L + S +L DT +DM
Sbjct: 113 RWRGAAPIQRAILAGDAETGITIMQMDAGLDTGAMLSRESILLAPDTTAPWLHDMLAAMG 172
Query: 132 ------------------FKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
PQ G +YA + K E +LDW +A + RK+ A NP+P
Sbjct: 173 ARMIVETLARLEDDEPPAATPQPAEGVTYAHKLAKEEGLLDWRRNAVELDRKVRALNPWP 232
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
G ++ + K L+ A + PGT+L+ + + + CGK ++ L++Q+
Sbjct: 233 G--VWFEMAGERIKVLE-----AAVTPGSGAPGTVLD----DQLTIACGKFALRPLKVQR 281
Query: 234 NNKKKISATEFING 247
K ++A+E + G
Sbjct: 282 AGKAPMTASEMLRG 295
>gi|313199963|ref|YP_004038621.1| methionyl-tRNA formyltransferase [Methylovorus sp. MP688]
gi|312439279|gb|ADQ83385.1| methionyl-tRNA formyltransferase [Methylovorus sp. MP688]
Length = 316
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 14/183 (7%)
Query: 80 KLLNKIEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+++ ++ M+ G+LP DT+ +L + L + L++ + + + L +PQ
Sbjct: 140 EVVPALDAGAMVEKGVLPITGRDTAQSLHDGLSAMGAQLMVKAMDTLATQRS-LPAEPQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+YA ++K EA +DW+ SA+ I R++ AFNPFP A+ + +IW A A
Sbjct: 199 EALVTYAAKLQKAEAGIDWTQSAEAISRQVRAFNPFPVAQAKL-----NEDICRIWMATA 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYF 255
++ +PG +++V + I+V CG+ ++++ ELQ K++ A +F+ G +K F
Sbjct: 254 --VDGNAEPGVVVSVG--DAIVVGCGQGLLRIEELQMPGGKRLQAAQFMAGHALKPGDRF 309
Query: 256 ISV 258
SV
Sbjct: 310 YSV 312
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT A L L S+H +V++LT+PD +GRGMKL SPVK+ AL+H I ++
Sbjct: 4 LKIIFAGTPDFAVPALAALVASQHEVVMVLTQPDRPAGRGMKLKASPVKELALQHQIPVL 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP +LK +IA ++ D+MIV
Sbjct: 64 QPETLKDADIQAQIA--------AVKADVMIV 87
>gi|423448371|ref|ZP_17425250.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG5O-1]
gi|401128965|gb|EJQ36648.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG5O-1]
Length = 314
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKEEYEKVLALEADLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + +DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQNEDEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTL--- 238
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
++ +K+W +S+E+ +PGTI+ + +G +V G + +K+ ELQ + KK++S
Sbjct: 239 --AEQVVKVWWGEKVSLEAKAEPGTIVGLE-EDGFVVATGNEIGVKITELQPSGKKRMSC 295
Query: 242 TEFINGC 248
++F+ G
Sbjct: 296 SQFLRGT 302
>gi|398304098|ref|ZP_10507684.1| methionyl-tRNA formyltransferase [Bacillus vallismortis DV1-F-3]
Length = 316
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEEGYEVVGVVTQPDRPKGRKKVLTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHK---------IANETHKLLNKIEFD------IMIVMGILPE-------- 98
P +++ + K + ++L K D I + +LPE
Sbjct: 63 PEKVRVTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLD---AGDMISKVEVDIEETDNVGTLHDKLSAAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + ++ NP+P A T +
Sbjct: 180 TVPNVISGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQVRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W + +PGT++ + GI+V G LL ELQ KK++
Sbjct: 239 NGQN----LKVWASKKTPAPKKAEPGTVVAIE-KQGIIVATGNETALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|301018855|ref|ZP_07183094.1| methionyl-tRNA formyltransferase [Escherichia coli MS 69-1]
gi|300399512|gb|EFJ83050.1| methionyl-tRNA formyltransferase [Escherichia coli MS 69-1]
Length = 268
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 112 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 170 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTTTNAAPGTILEAN-K 223
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 224 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 255
>gi|53803079|ref|YP_115238.1| methionyl-tRNA formyltransferase [Methylococcus capsulatus str.
Bath]
gi|73919406|sp|Q603G2.1|FMT_METCA RecName: Full=Methionyl-tRNA formyltransferase
gi|53756840|gb|AAU91131.1| methionyl-tRNA formyltransferase [Methylococcus capsulatus str.
Bath]
Length = 308
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 76 NETHKLLNKIE--FDIMIVMG-----ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMT 128
ET L +IE D ++G I +DT+ +L ++L L ++I+ + + D
Sbjct: 129 RETGVTLMRIEPRLDAGPMLGKRSCSIGDDDTTASLHDRLAGLGAEMLIELLPGLAADRL 188
Query: 129 KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKF 188
+ +S + +YA I+K+EA LDW A ++ R++ AFNP+P A+T +
Sbjct: 189 TGEIQDESQV--TYAEKIEKSEARLDWQKDATSLSRRVRAFNPWPVAETTL-----EGTV 241
Query: 189 LKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L+IW A L PG+I+ + V CG+ +++LE+Q K+++SA +F+N
Sbjct: 242 LRIWSAQVLDPAPDAPPGSIIACT--KNLDVACGRGALRILEVQPPGKRRMSAKDFLN 297
>gi|423395833|ref|ZP_17373034.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG2X1-1]
gi|423406709|ref|ZP_17383858.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG2X1-3]
gi|401653575|gb|EJS71119.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG2X1-1]
gi|401659999|gb|EJS77482.1| methionyl-tRNA formyltransferase [Bacillus cereus BAG2X1-3]
Length = 314
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + ++DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLAG- 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
+ +K+W +SI +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 241 ----QVIKVWWGEKVSITKKAEPGTIVALE-EDGFVVATGNETGVKITELQPSGKKRMSC 295
Query: 242 TEFINGCIKNI 252
++F+ G I
Sbjct: 296 SQFLRGTKPEI 306
>gi|225848240|ref|YP_002728403.1| methionyl-tRNA formyltransferase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643886|gb|ACN98936.1| methionyl-tRNA formyltransferase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 311
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 78/313 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT A L L S H +V ++T+PD GRG K+ PVK+ ALKH+I ++
Sbjct: 1 MKVLFWGTPEFAVESLKALIQSNHQVVAVITQPDKPKGRGQKVQPPPVKEEALKHNIPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
QP +K N ++ ET K LN DI +V+ ILPE+
Sbjct: 61 QPEKIKNNQEFV----ETIKQLNP---DISVVVAYGKILPEEIINIPKYKTINVHASLLP 113
Query: 100 ---TSLTLQNKL---EKLSKILIIDTIKKIE----YDMTKLFFKPQSNI----------- 138
+ +Q + E+ + + I++ +K+++ Y TK+ P+ +I
Sbjct: 114 KYRGAAPIQRAIMDGEEETGVCIMEIVKELDAGDVYACTKVKILPEDDIITLHDKLAKEG 173
Query: 139 -------------GE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
G+ +YA I+K E +DW+ AK I ++ A +P
Sbjct: 174 AKLLIEVLDKIEKGQIEKVPQDHSKATYAKPIEKEEGKIDWNKPAKDIFNQVRALKVWPK 233
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A + +Q +KI L KPG IL + GI+V + + +Q
Sbjct: 234 AFANFRDFQ-----VKILNVEVLKECKEGKPGEILKASDKEGIVVKTKDGCLLIRTIQFP 288
Query: 235 NKKKISATEFING 247
N K IS+ E + G
Sbjct: 289 NSKPISSQEAVRG 301
>gi|366161350|ref|ZP_09461212.1| methionyl-tRNA formyltransferase [Escherichia sp. TW09308]
gi|432373857|ref|ZP_19616888.1| methionyl-tRNA formyltransferase [Escherichia coli KTE11]
gi|430893279|gb|ELC15603.1| methionyl-tRNA formyltransferase [Escherichia coli KTE11]
Length = 315
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDTS TL +KL L +I T+K++ K + ++ + +YA + K EA +DWSL
Sbjct: 162 EDTSGTLYDKLAGLGPQGLIATLKQLADGTAKPEVQDETLV--TYAEKLSKEEARIDWSL 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA + R I AFNP+P ++ +++ +K+WKA + + PGTIL N GI
Sbjct: 220 SAAQLERCIRAFNPWP---MSWLEIEDQP--VKVWKASVIDTATKAAPGTILEAN-KQGI 273
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V G ++ LL LQ KK +SA + +N
Sbjct: 274 QVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|148826744|ref|YP_001291497.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittEE]
gi|166214899|sp|A5UEB3.1|FMT_HAEIE RecName: Full=Methionyl-tRNA formyltransferase
gi|148716904|gb|ABQ99114.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittEE]
Length = 318
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLES--GKFTAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+ +YA + K EA LDWSL A + R I AFNP+P A Y S +++ + LK+++
Sbjct: 198 DSQSNYAEKLSKEEAQLDWSLPAVQLERNIRAFNPWPIA---YFSTEDRDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKLMSAQDLLNG 306
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A ++ I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNDIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+++V+ ILP
Sbjct: 64 QPKSLR--------KEEVQSELKALNADVIVVVAYGLILP 95
>gi|170769544|ref|ZP_02903997.1| methionyl-tRNA formyltransferase [Escherichia albertii TW07627]
gi|170121601|gb|EDS90532.1| methionyl-tRNA formyltransferase [Escherichia albertii TW07627]
Length = 315
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +DWSL
Sbjct: 162 EDTSGTLYDKLAELGPQGLITTLKQLADGTVKPEVQDETLV--TYAEKLSKEEARIDWSL 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA + R I AFNP+P ++ + + +K+WKA + + PGTIL N GI
Sbjct: 220 SAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATKAAPGTILEAN-KQGI 273
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V G ++ LL LQ KK +SA + +N
Sbjct: 274 QVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + I
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPIF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|82701527|ref|YP_411093.1| methionyl-tRNA formyltransferase [Nitrosospira multiformis ATCC
25196]
gi|123740793|sp|Q2YC20.1|FMT_NITMU RecName: Full=Methionyl-tRNA formyltransferase
gi|82409592|gb|ABB73701.1| methionyl-tRNA formyltransferase [Nitrosospira multiformis ATCC
25196]
Length = 312
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL KL +L I++ + ++ K+ PQ+++ +YA ++K EA +DW +
Sbjct: 158 DDTAGTLHEKLGQLGAACIVEALALLQQG--KIIATPQNDLAATYASKLEKTEAEIDWRM 215
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A+ I R + AFNP PG + +K+W+ E+ +KPG I+ + +GI
Sbjct: 216 DAENIDRAVRAFNPRPGMHSTVNGIS-----MKVWQTSVDIAETDEKPGEIVAIR-PDGI 269
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CGK+ + L +QK+ KK+ + EF+ G
Sbjct: 270 VVACGKHALILKIVQKSGGKKLRSAEFLLG 299
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AAA L+ L ++ H I L+LT+PD +GRGMK S VK A K ++
Sbjct: 1 MRIIFAGTPPFAAAALEALADAGHEIALVLTQPDRPAGRGMKNASSAVKLLAQKRGFGLL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E H L + DIM+V ILP
Sbjct: 61 QPPSLR--------QPELHMQLEAVRADIMVVAAYGLILP 92
>gi|149201580|ref|ZP_01878554.1| methionyl-tRNA formyltransferase [Roseovarius sp. TM1035]
gi|149144628|gb|EDM32657.1| methionyl-tRNA formyltransferase [Roseovarius sp. TM1035]
Length = 302
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 123/307 (40%), Gaps = 75/307 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKY--------- 51
M++IF GT + +L+ L + H + + +P +GRG K SPV+
Sbjct: 1 MRVIFMGTPDFSVPVLEALVAAGHEVAAVYCQPPRPAGRGKKDRPSPVQARAEALGLPVH 60
Query: 52 ---------------ALKHSIKII-------------QPISLKLN------------GKY 71
ALK + ++ P LN
Sbjct: 61 HPVSLKEATAQAEFAALKAEVAVVVAYGLILPQAVLDAPTRGCLNIHASLLPRWRGAAPI 120
Query: 72 HK--IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
H+ +A +T + ++ + + G I P++T+ L ++L L LI+ +
Sbjct: 121 HRAIMAGDTETGVCIMQMEAGLDTGPVLLREPVAIGPQETTGELHDRLSALGARLIVAAL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++++ L +PQ G +YA I K+EA +DW+ A + R I +PFPGA
Sbjct: 181 ERLD----ALTPEPQPEAGVTYAAKIDKSEARVDWTRPATEVDRLIRGLSPFPGAWCEVG 236
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ K + +AH PG +L +G+ V CG ++LL LQ+ +
Sbjct: 237 GERIKLLCSAMAEAHG-------APGVVLA----DGLTVACGTGSVRLLRLQRAGRAAQD 285
Query: 241 ATEFING 247
A EF+ G
Sbjct: 286 ADEFLRG 292
>gi|291563556|emb|CBL42372.1| methionyl-tRNA formyltransferase [butyrate-producing bacterium
SS3/4]
Length = 308
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 124/307 (40%), Gaps = 69/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS---- 56
M+I+F GT A L L H +V ++T+PD GRG + +PVK+ A+++
Sbjct: 1 MRIVFMGTPDFAVPTLTALIEGGHEVVAVVTQPDKPKGRGKAVLMTPVKEKAIEYEIPVY 60
Query: 57 --IKIIQP-------------------------------------ISLKLNGKYHKIA-- 75
+K+ P + L KY A
Sbjct: 61 QPVKVRDPEFVELLKTMAPDAIVVVAFGQILPKSILDLPKYGCVNVHASLLPKYRGAAPI 120
Query: 76 ------NETHKLLNKIEFDIMIVMGILPE---------DTSLTLQNKLEKLSKILIIDTI 120
E + + D+ + G + E +T +L +KL L +I+ T+
Sbjct: 121 QWAVIDGEKESGVTTMMMDVGLDTGDMLEQKAIPLDEKETGGSLFDKLSALGGSMILSTL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
K +E + PQ G SYA ++ K +DW+ A +I R + NP+P A Y
Sbjct: 181 KGLENGT--ITRTPQGESGTSYAKMLTKEMGHIDWTKDAVSIERLVRGLNPWPSA---YT 235
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
SY K +KIW A + + PG I +V + + V G+ V+ + ELQ KK++
Sbjct: 236 SYAGKT--MKIWAAEVADLPGERAPGKI-HVT-KDRLFVETGEGVLDVKELQLEGKKRMD 291
Query: 241 ATEFING 247
F+ G
Sbjct: 292 TASFLRG 298
>gi|254877133|ref|ZP_05249843.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843154|gb|EET21568.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 312
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 131/308 (42%), Gaps = 72/308 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ I+FAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ A+ ++ ++
Sbjct: 4 LNIVFAGTPDISAQVLKDLYQSQHNIQAVLTQPDRAKGRGKKIQFSPVKEVAIANNTPVL 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-ILPE--------------------- 98
QP+S K KY ++ + +L K + ++I G ILP+
Sbjct: 64 QPLSFK---KYPQVLEQIREL--KPDVIVVIAYGIILPQEFLDIPKYGCLNIHVSLLPKW 118
Query: 99 ------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLFFK 133
D L + L L +I DT + + KL K
Sbjct: 119 RGAAPIQRAIQAGDSKTGICIMQMDAGLDTGDILNTLEVEIQDTDTSQSLHDKFAKLSIK 178
Query: 134 P-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
P Q GE +YA I K E ++D++ SAK I I AF P+P A
Sbjct: 179 PLLETLENIDTIKPQPQQGEPTYAHKITKQEGLIDFTKSAKEISCHIRAFTPWPSAFFML 238
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
Q +K+ L S + I ++ NG + +I+ +LQ NKK +
Sbjct: 239 GGEQ-----VKVGDFEILEKSSNDEVTAITDIT-KNGFDIATNDKIIRFKQLQFPNKKML 292
Query: 240 SATEFING 247
+ + +NG
Sbjct: 293 NIADILNG 300
>gi|424793182|ref|ZP_18219326.1| Methionyl-tRNA formyltransferase [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796756|gb|EKU25210.1| Methionyl-tRNA formyltransferase [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 307
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGT------SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK 54
MKI+FAGT S+ AAA H +V + T+PD +GRG L SPVK A+
Sbjct: 1 MKIVFAGTPDFAVPSLRAAA-------QRHEVVAVYTQPDRPAGRGRGLTPSPVKLEAVA 53
Query: 55 -----------------HSIKIIQP----------------ISLKLNG----------KY 71
+++ +QP +++ +G ++
Sbjct: 54 RGIPVLQPDTLRSPEALQTLRALQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRW 113
Query: 72 HKIA----------NETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKI 114
A +ET L ++E D V+ I DT L ++L L
Sbjct: 114 RGAAPIQRAIEAGDSETGVCLMQMEAGLDTGPVLMSQRTPIGDSDTGGQLHDRLAALGAQ 173
Query: 115 LIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
++ D + + + + +PQ +G +YA + K +A LDW A + ++ AFNP+P
Sbjct: 174 VLADGLGLLRAGI-RPVPQPQPEVGVTYAHKLDKAQARLDWQQPAAQLALRVRAFNPWPI 232
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
+ + ++I A AL + + PGT+L + GI + CG+ ++L LQ+
Sbjct: 233 TEAVLAGER-----VRIHGAVALELAHAQPPGTVLAAS-KQGIDIACGQGALRLRVLQRE 286
Query: 235 NKKKISATEFIN 246
K I+A +++N
Sbjct: 287 GGKAITAADYLN 298
>gi|350265886|ref|YP_004877193.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349598773|gb|AEP86561.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 317
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR L PVK+ A+++ I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVLTPPPVKEEAMRNGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ L+ F I + +LPE
Sbjct: 63 PEKVRLKEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLFFK 133
T +T+ +EKL D I K+E D+ KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLD---AGDMISKVEVDIEETDNVGTLHDKLSVAGAKLLSE 179
Query: 134 PQSNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
N+ +YAP IK+ + +LDWS + + + ++ NP+P A T +
Sbjct: 180 TVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQVRGLNPWPVAYT-TL 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ QN LK+W + + +PGT++ V GI+V G + LL ELQ KK++
Sbjct: 239 NGQN----LKVWASKKTPAPTKAEPGTVVAVE-KEGIIVATGNDTALLLTELQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|365846737|ref|ZP_09387237.1| methionyl-tRNA formyltransferase [Yokenella regensburgei ATCC
43003]
gi|364573467|gb|EHM50963.1| methionyl-tRNA formyltransferase [Yokenella regensburgei ATCC
43003]
Length = 315
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L +KL +L +++T+ ++ + +S + +YA + K EA +D
Sbjct: 159 ITAEDTSASLYDKLAELGPDGLLETLNQLANHRAAPEVQDESLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSL A+ + R I AFNP+P +Y + ++ +KIW+A + E++ PGTI++ N
Sbjct: 217 WSLPAEQLERCIRAFNPWP--MSYVVI---DEQPVKIWQASVIDAETSADPGTIVDAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V GK ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +SEH IV + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSEHQIVGVFTQPDRPAGRGKKLMPSPVKALAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLNADVMVVVAYGLILP 96
>gi|417811128|ref|ZP_12457796.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-49A2]
gi|340046238|gb|EGR07169.1| methionyl-tRNA formyltransferase [Vibrio cholerae HC-49A2]
Length = 292
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 68/287 (23%)
Query: 21 NSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKI------ 74
+SEH I+ + T+P+ +GRG KL SPVK AL+H++ + QP + K + ++
Sbjct: 2 SSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDESKQQLAALNAD 61
Query: 75 ---------------------------------------------ANETHKLLNKIEFDI 89
A ++ + ++ D+
Sbjct: 62 LMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDSETGVTIMQMDV 121
Query: 90 ------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGE 140
M+ + LP DTS ++ +KL +L +++ ++ I T + K +
Sbjct: 122 GLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQG-TAVAVKQDDGLA- 179
Query: 141 SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE 200
+YA + K EA ++WS +A I R I AFNP+P + ++ + +K+W+A +
Sbjct: 180 NYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSH-----FEVAENSIKVWQARVETRA 234
Query: 201 STKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
T+ PGTI+ + +GI V G++V+ L LQ KK + + +N
Sbjct: 235 VTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIPGKKALPVQDILNA 280
>gi|194291226|ref|YP_002007133.1| methionyl-tRNA formyltransferase [Cupriavidus taiwanensis LMG
19424]
gi|193225061|emb|CAQ71072.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Cupriavidus taiwanensis LMG 19424]
Length = 337
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL + L L +I+D +++++ L PQ G +YA I K+EA LD
Sbjct: 173 DDTTGTLHDTLAALGARMIVDALRQLDTGR-PLPATPQPEQGVTYAEKIAKDEAPLDLRR 231
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIEST--KKPGTILNVNFHN 215
A + ++ AFNPFPGA + Q +K W+A L+ S+ PGT+L +
Sbjct: 232 PAAELANQVRAFNPFPGA-----TVQVGDTVIKCWQAVPLAAASSLPHPPGTVLAAD-AA 285
Query: 216 GILVVCGK-NVIKLLELQKNNKKKISATEFIN 246
GIL+ CG+ + +++ ELQK ++ A +F+
Sbjct: 286 GILIACGEGSALQVTELQKPGGRRQPAQQFLQ 317
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
+++ FAGT A L+ ++ + +V +LT+PD +GRGM+L SPVK++A+ + + +
Sbjct: 7 LRVAFAGTPEFARVALEAIHAAGFPVVAVLTQPDRPAGRGMQLQASPVKQFAVANGLAPV 66
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
+QP SL+ GKY + A L I D+M+V ILP +
Sbjct: 67 LQPRSLRRQGKYPEEAAAAIDTLAGIAPDVMVVAAYGLILPAE 109
>gi|148358672|ref|YP_001249879.1| methionyl tRNA formyltransferase [Legionella pneumophila str.
Corby]
gi|166214905|sp|A5IAY3.1|FMT_LEGPC RecName: Full=Methionyl-tRNA formyltransferase
gi|148280445|gb|ABQ54533.1| methionyl tRNA formyltransferase [Legionella pneumophila str.
Corby]
Length = 314
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ ++FAGT + LD L S H++ + T+PD +GRG KL SPVK++A+ + + +
Sbjct: 4 LTVVFAGTPEFGLSCLDALIQSRHHLKAVYTQPDRPAGRGRKLQESPVKEWAINNQVPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP LN K + +E L+ ++ D+M+V+ ILP+
Sbjct: 64 QP----LNFKNQEAIDE----LSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L L K + + DT + + K+
Sbjct: 116 RWRGASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKATCPVTSSDTAGSLHDKLAKMS 175
Query: 132 FKPQSNIGESYAP-----LIKKNE------------AVLDWSLSAKTIMRKINAFNPFPG 174
KP ++ E+ A ++ NE A ++W SA I RKI AFNP+P
Sbjct: 176 VKPLLDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPV 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T ++ L+I +A A I ST+ PG +LN++ NG+LV N + + ++Q
Sbjct: 236 AYTLA-----EELMLRIHQAKATDIMSTEMPGMVLNID-KNGMLVATNDNALLVEKIQFP 289
Query: 235 NKKKISATEFIN 246
K IS +++N
Sbjct: 290 GAKVISVRDWLN 301
>gi|606222|gb|AAA58085.1| methionyl-tRNA formyltransferase [Escherichia coli str. K-12
substr. MG1655]
Length = 315
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVXDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ +++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVAELQADVMVVVAYGLILP 96
>gi|432865343|ref|ZP_20088440.1| methionyl-tRNA formyltransferase [Escherichia coli KTE146]
gi|431402089|gb|ELG85402.1| methionyl-tRNA formyltransferase [Escherichia coli KTE146]
Length = 315
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTVTNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|419800681|ref|ZP_14325950.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
F0449]
gi|385694412|gb|EIG25018.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
F0449]
Length = 311
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 70/312 (22%)
Query: 2 KIIFAGTSISAAAIL-DTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L +S + I+ ++T+PD GR ++ +PVK+ AL+H + ++
Sbjct: 3 KLIFMGTPDFSATVLKGLLADSRYEILAVVTQPDRKVGRKKEIRMTPVKQVALEHQLPVL 62
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP +SL +G KY A
Sbjct: 63 QPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGGAPIH 122
Query: 79 HKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ L+N E + +M IL ED TL KL L + L++DT+
Sbjct: 123 YALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLLDTLP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ PQ +++P I E VLDW+ + + + +I NP+P A T
Sbjct: 183 A--YLAGEIKSSPQDPNLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPVAHTLL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F K+++A E PG ++ ++ +LV G+ + L +Q K K+S
Sbjct: 239 --NGQRF-KVYEAEL--CEGNGNPGEVIGLSKKE-LLVAAGEGSLSLKVVQPAGKPKMSI 292
Query: 242 TEFINGCIKNIK 253
T+F+NG + +K
Sbjct: 293 TDFLNGAGRQLK 304
>gi|422337240|ref|ZP_16418212.1| methionyl-tRNA formyltransferase [Aggregatibacter aphrophilus
F0387]
gi|353345792|gb|EHB90083.1| methionyl-tRNA formyltransferase [Aggregatibacter aphrophilus
F0387]
Length = 318
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + +DTS L +KL +++ +I+ + + D T +PQ
Sbjct: 146 DTGDMLHKVFCDIDL------QDTSADLYHKLAEIAPNALIEVLNHLT-DGT-FIAEPQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDW LSA + R I AFNP+P A Q + LK+++A
Sbjct: 198 DTQSNYAEKLSKEEAKLDWQLSAAQLERNIRAFNPWPMAYLQLTDEQGNPQTLKVYQATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L ++ PGTI++ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 258 LP-SVSQIPGTIISAD-KNGIQIATADGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L +S HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAAQHLQALIDSPHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L + D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KPETQAELTALHADVMVVVAYGLILPQ 96
>gi|260583338|ref|ZP_05851111.1| methionyl-tRNA formyltransferase [Haemophilus influenzae NT127]
gi|260093609|gb|EEW77524.1| methionyl-tRNA formyltransferase [Haemophilus influenzae NT127]
Length = 318
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL + + +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAEFAPSALIDVLDNLEN--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKK---KFLKIWK 193
+YA + K EA LDWSL A + R I AFNP+P A Y S ++K + LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIA---YFSTEDKDGNAQTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AEVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|407706325|ref|YP_006829910.1| phage replication protein [Bacillus thuringiensis MC28]
gi|423615873|ref|ZP_17591707.1| methionyl-tRNA formyltransferase [Bacillus cereus VD115]
gi|401260410|gb|EJR66583.1| methionyl-tRNA formyltransferase [Bacillus cereus VD115]
gi|407384010|gb|AFU14511.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis MC28]
Length = 314
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y K+ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEKVLALEADLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
++A IK+ + +DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQNEDEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTL--- 238
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
++ +K+W +S+E+ +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 239 --AEQVVKVWWGEKVSLEAKAEPGTIVGLE-EDGFVVATGNETGVKITELQPSGKKRMSC 295
Query: 242 TEFINGCIKNI 252
++F+ G I
Sbjct: 296 SQFLRGTKPEI 306
>gi|383188351|ref|YP_005198479.1| methionyl-tRNA formyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371586609|gb|AEX50339.1| methionyl-tRNA formyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 311
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+E DI P DTS +L +KL +L +++T+K++ K + +
Sbjct: 143 DTGNMLHKVECDIS------PADTSASLYDKLAELGPQGLLETLKQLANGTVKPEVQSEE 196
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
++ +YA + K EA LDW+LSA+ + R I AFNP+P + I Q +K+W+A
Sbjct: 197 DV--TYAEKLSKEEARLDWNLSAEQLERCIRAFNPWP-VSFFMIEEQP----VKVWQAEC 249
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L +++ PGTI+ + GI + ++ + +LQ + KK +SA + +N
Sbjct: 250 LPGKNSAAPGTIVAAD-KKGIQIATSDGILNITQLQPSGKKAMSAQDLLN 298
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AA LD L +SEH +V + T+PD +GRG KL SPVK A H I +
Sbjct: 1 MRIIFAGTPDFAARHLDALLSSEHQVVGVFTQPDRPAGRGNKLTASPVKVLAQTHDIPVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L++ ++ D+M+V+ ILP
Sbjct: 61 QPKSLR--------PEENQSLVSALQADVMVVVAYGLILP 92
>gi|337283501|ref|YP_004622972.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis ATCC
15912]
gi|335371094|gb|AEH57044.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis ATCC
15912]
Length = 322
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 70/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLY-NSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L +S + I+ ++T+PD GR ++ +PVK+ AL+H + ++
Sbjct: 14 KLIFMGTPDFSATVLKGLLADSRYEILAVVTQPDRKVGRKKEIRMTPVKQVALEHQLPVL 73
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP +SL +G KY A
Sbjct: 74 QPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGGAPIH 133
Query: 79 HKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ L+N E + +M IL ED TL KL L + L++DT+
Sbjct: 134 YALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLLDTLP 193
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ PQ +++P I E VLDW+ + + + +I NP+P A T
Sbjct: 194 A--YLAGEIKSSPQDPNLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPVAHTLL-- 249
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F K+++A E PG ++ ++ +LV G+ + L +Q K K+S
Sbjct: 250 --NGQRF-KVYEAEL--CEGNGNPGEVIGLSKKE-LLVAAGEGSLSLKVVQPAGKPKMSI 303
Query: 242 TEFINGCIKNIK 253
T+F+NG + +K
Sbjct: 304 TDFLNGAGRQLK 315
>gi|312867817|ref|ZP_07728022.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
F0405]
gi|311096572|gb|EFQ54811.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
F0405]
Length = 311
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 136/312 (43%), Gaps = 70/312 (22%)
Query: 2 KIIFAGTSISAAAIL-DTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L +S + I+ ++T+PD GR ++ +PVK+ AL+H + ++
Sbjct: 3 KLIFMGTPDFSATVLKGLLADSRYKILAVVTQPDRKVGRKKEIRMTPVKQVALEHQLPVL 62
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP +SL +G KY A
Sbjct: 63 QPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGGAPIH 122
Query: 79 HKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ L+N E + +M IL ED TL KL L + L++DT+
Sbjct: 123 YALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLLDTLP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ PQ +++P I E VLDW+ + + + +I NP+P A T
Sbjct: 183 A--YLAGEIKPSPQDPSLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPAAHTLL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F K+++A E PG ++ + ++V G+ + L +Q K K+S
Sbjct: 239 --NGQRF-KVYEAEL--CEGNGNPGEVIALTKKE-LVVAAGEGALSLKVVQPAGKPKMSI 292
Query: 242 TEFINGCIKNIK 253
T+F+NG + +K
Sbjct: 293 TDFLNGAGRQLK 304
>gi|255970685|ref|ZP_05421271.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T1]
gi|255961703|gb|EET94179.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T1]
Length = 314
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH+I ++Q
Sbjct: 4 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNILVLQ 63
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 64 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 123
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 124 YSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLLETLP 183
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 184 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 240
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 241 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 297
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 298 EFLNGVGQNV 307
>gi|251793802|ref|YP_003008534.1| methionyl-tRNA formyltransferase [Aggregatibacter aphrophilus
NJ8700]
gi|247535201|gb|ACS98447.1| methionyl-tRNA formyltransferase [Aggregatibacter aphrophilus
NJ8700]
Length = 318
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + +DTS L +KL +++ +I+ + + D T +PQ
Sbjct: 146 DTGDMLHKVFCDIDL------QDTSADLYHKLAEIAPNALIEVLNHLT-DGT-FIAEPQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDW LSA + R I AFNP+P A Q + LK+++A
Sbjct: 198 DTQSNYAEKLSKEEAKLDWQLSAAQLERNIRAFNPWPMAYLQLTDEQGNPQTLKVYQATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L ++ PGTI++ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 258 LP-SVSQIPGTIISAD-KNGIQIATADGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIF GT AA L L +S HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFVGTPDFAAQHLQALIDSPHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L + D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KPETQAELTALHADVMVVVAYGLILPQ 96
>gi|387878758|ref|YP_006309061.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
FW213]
gi|386792215|gb|AFJ25250.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
FW213]
Length = 324
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 70/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLY-NSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L +S + I+ ++T+PD GR ++ +PVK+ AL+H + ++
Sbjct: 16 KLIFMGTPDFSATVLKGLLADSRYEILAVVTQPDRKVGRKKEIRMTPVKQVALEHQLPVL 75
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP +SL +G KY A
Sbjct: 76 QPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGGAPIH 135
Query: 79 HKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ L+N E + +M IL ED TL KL L + L++DT+
Sbjct: 136 YALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLLDTLP 195
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ PQ +++P I E VLDW+ + + + +I NP+P A T
Sbjct: 196 A--YLAGEIKSSPQDPNLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPVAHTLL-- 251
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F K+++A E PG ++ ++ +LV G+ + L +Q K K+S
Sbjct: 252 --NGQRF-KVYEAEL--CEGNGNPGEVIGLSKKE-LLVAAGEGSLSLKVVQPAGKPKMSI 305
Query: 242 TEFINGCIKNIK 253
T+F+NG + +K
Sbjct: 306 TDFLNGAGRQLK 317
>gi|1772511|emb|CAA71358.1| Met-tRNAi formyl transferase [Escherichia coli str. K-12 substr.
MG1655]
Length = 155
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +DWSL
Sbjct: 2 EDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARIDWSL 59
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA + R I AFNP+P ++ + + +K+WKA + + PGTIL N GI
Sbjct: 60 SAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-KQGI 113
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V G ++ LL LQ KK +SA + +N
Sbjct: 114 QVATGDGILNLLSLQPAGKKAMSAQDLLN 142
>gi|121610997|ref|YP_998804.1| methionyl-tRNA formyltransferase [Verminephrobacter eiseniae
EF01-2]
gi|166215596|sp|A1WQ79.1|FMT_VEREI RecName: Full=Methionyl-tRNA formyltransferase
gi|121555637|gb|ABM59786.1| methionyl-tRNA formyltransferase [Verminephrobacter eiseniae
EF01-2]
Length = 330
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 28/192 (14%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +TH + ++ D + G I P DT+ TL ++L L LI+ ++K+
Sbjct: 134 AGDTHTGVTIMQMDAGLDTGAMLLSQGSAIAPTDTTATLHDRLAALGADLIVQALEKMAA 193
Query: 126 --DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
D+ L Q G +YA I+K+E+ +DWSL A+ I ++I AF+P PGA T
Sbjct: 194 GADLPALA---QPAQGVAYARKIEKSESSIDWSLPAQRIGQRIRAFDPAPGASTTC---- 246
Query: 184 NKKKFLKIW--KAHALSIESTKK-----PGTILNVNFHNGILVVCGKN-VIKLLELQKNN 235
+K+W +I+ + PG IL+ + +GI V CG+ ++L LQ+
Sbjct: 247 -NGTSIKLWGYAIDGATIDGQRGVPRMHPGQILSAD-DSGIAVACGQGTALRLTVLQRAG 304
Query: 236 KKKISATEFING 247
K+++A +F+ G
Sbjct: 305 GKRLAAADFLRG 316
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++FAGT A L L ++ ++ L+LT+PD +GRG++ SPVK+ AL H + +
Sbjct: 1 MKVVFAGTPGFARVALQRLLDAGFSLPLVLTRPDQPAGRGLQWQASPVKQCALAHGLAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+G+Y + A L + ++M+V ILP+
Sbjct: 61 QPRSLRLDGRYPQDAAAARAALLAAQAEVMVVAAYGLILPQ 101
>gi|229104428|ref|ZP_04235097.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-28]
gi|228679126|gb|EEL33334.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-28]
Length = 314
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 65/311 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++F GT + +L L +++V ++T+PD GR L +PVK A KH I ++
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------- 98
QP+ ++ +Y ++ L+ F I + +LPE
Sbjct: 62 QPLKIREKDEYEQVLALEADLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +EKL IL ++ E + T F S G
Sbjct: 122 HYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTV 181
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
S+A IK+ + +DW+ + + + I NP+P A T
Sbjct: 182 PLLIQGKLEPIKQNEDEVSFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTL--- 238
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISA 241
++ +K+W +S+E+ +PGTI+ + +G +V G +K+ ELQ + KK++S
Sbjct: 239 --AEQVVKVWWGEKVSLEAKAEPGTIVGLE-EDGFVVATGNETGVKITELQPSGKKRMSC 295
Query: 242 TEFINGCIKNI 252
++F+ G I
Sbjct: 296 SQFLRGTKPEI 306
>gi|187931618|ref|YP_001891602.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238691560|sp|B2SGG5.1|FMT_FRATM RecName: Full=Methionyl-tRNA formyltransferase
gi|187712527|gb|ACD30824.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 313
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 138/311 (44%), Gaps = 77/311 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S++NI +LT+PD GRG K+ FSPVK+ AL + +
Sbjct: 4 LNIIFAGTPDISAQVLKDLYKSQYNIQAVLTQPDRAKGRGKKVQFSPVKEVALANHTPVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP+S K N E + + +++ D+++V+ I+P+
Sbjct: 64 QPLSFKKN-------PEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLP 116
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L + L L +I DT + + KL
Sbjct: 117 KWRGAAPIQRAIQAGDTKTGVCIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLS 176
Query: 132 FKP-------------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
KP + GE +YA I K E ++D++ SA I I AF P+PGA
Sbjct: 177 IKPLLETLEKIEIIKPEPQQGEPTYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGA-- 234
Query: 178 YYISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y+I + +K+ + L + +K GTI+++ + +G + +I+ +LQ NK
Sbjct: 235 YFIL---DDEAIKVGEFEILYQNTDNRKAGTIIDI-YRSGFDIATSDKIIRFRQLQFPNK 290
Query: 237 KKISATEFING 247
K ++ + +NG
Sbjct: 291 KMLNIVDILNG 301
>gi|415985296|ref|ZP_11559558.1| methionyl-tRNA formyltransferase, partial [Acidithiobacillus sp.
GGI-221]
gi|339834717|gb|EGQ62459.1| methionyl-tRNA formyltransferase [Acidithiobacillus sp. GGI-221]
Length = 175
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DT+ +L ++L +L + + + + K PQ +YA +KK EA+LD
Sbjct: 21 IAADDTAASLHDRLARLGGKALRHVLDDLWAERLKPV--PQDPALVTYAHKLKKEEALLD 78
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W L A T+ R + AFNP P A T + + K L++W+A L + PG+I V
Sbjct: 79 WRLPAATLERLVRAFNPSPVAHTLF-----RDKGLRVWQARVLGAGGDQAPGSISAVE-K 132
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG++ ++LL +Q K +S ++F G
Sbjct: 133 DGVVVTCGEDRLQLLAVQPAGKGVLSGSDFARG 165
>gi|322391002|ref|ZP_08064507.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis ATCC
903]
gi|321142306|gb|EFX37779.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis ATCC
903]
Length = 311
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 70/312 (22%)
Query: 2 KIIFAGTSISAAAIL-DTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L +S + I+ ++T+PD GR ++ +PVK+ AL+H + ++
Sbjct: 3 KLIFMGTPDFSATVLKGLLADSRYEILAVVTQPDRKVGRKKEIRMTPVKQVALEHRLPVL 62
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP +SL +G KY A
Sbjct: 63 QPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGGAPIH 122
Query: 79 HKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ L+N E + +M IL ED TL KL L + L++DT+
Sbjct: 123 YALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLLDTLP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ PQ +++P I E VLDW+ + + + +I NP+P A T
Sbjct: 183 A--YLAGEIKPSPQDPSLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPVAHTLL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F K+++A E PG ++ + +LV G+ + L +Q K K+S
Sbjct: 239 --NGQRF-KVYEAEL--CEGNGNPGEVIALT-KKELLVAAGEGALSLKVVQPAGKPKMSI 292
Query: 242 TEFINGCIKNIK 253
T+F+NG + +K
Sbjct: 293 TDFLNGAGRQLK 304
>gi|312953218|ref|ZP_07772064.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0102]
gi|422692428|ref|ZP_16750449.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0031]
gi|422725674|ref|ZP_16782132.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0312]
gi|310628835|gb|EFQ12118.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0102]
gi|315152787|gb|EFT96803.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0031]
gi|315159378|gb|EFU03395.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0312]
Length = 313
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH+I ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNILVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|304316975|ref|YP_003852120.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433655122|ref|YP_007298830.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778477|gb|ADL69036.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293311|gb|AGB19133.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 311
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 88 DIMIVMGI--LPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPL 145
DI++ M I L ED S T+ +KL L +ID I K+ D + K Q + +YAP+
Sbjct: 147 DILLQMSIPILEEDNSETIHDKLAVLGGNALIDAINKM-VDGALMPVK-QDDSKATYAPI 204
Query: 146 IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKP 205
++K+ +++W A I + P+P A TYY K LKIW A S E +KP
Sbjct: 205 LEKSIGLINWQKDAVEIKNLVRGLRPWPVAYTYY-----KGNMLKIWAAEVYSYEGKEKP 259
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCI 249
GT++ N ++V CGK+ +K+LE+Q ++++ E++ G I
Sbjct: 260 GTVIYAG--NTLVVKCGKDALKILEIQSEGTRRMTVEEYLRGHI 301
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M I+F GT A L+ L S HN++L++T+PD GRG K+++SPVK+ A+K++I++
Sbjct: 1 MNIVFMGTPEFAVPSLEKLIESGHNVMLVITQPDKPKGRGKKISYSPVKECAIKNNIEVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP LK N E L+++ D+++V ILPE+
Sbjct: 61 QPPKLKNN-------KEIFDKLSQLNPDLIVVAAYGKILPEE 95
>gi|312111727|ref|YP_003990043.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y4.1MC1]
gi|311216828|gb|ADP75432.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y4.1MC1]
Length = 318
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 127/305 (41%), Gaps = 65/305 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT + IL L ++I ++T+PD GR +L PVK A KH I ++QP
Sbjct: 4 IVFMGTPDFSVPILKRLIEDGYHIAAVVTQPDKPKGRKRELTPPPVKVEAEKHGIPVLQP 63
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y +I L+ F I + +LPE
Sbjct: 64 TKIREQEQYEQILALEPDLIVTAAFGQILPKALLEAPKYGCINVHASLLPELRGGAPIHY 123
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTI----KKIEYDMTKLFFK--PQ 135
T +T+ EKL I DT+ K+ KL + PQ
Sbjct: 124 AILQGKTKTGVTIMYMAEKLDAGDILTQVEVPITETDTVGTLHDKLSIAGAKLLSETIPQ 183
Query: 136 SNIGE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
G+ +YA IK+ + +DW+ + + I NP+P A T Y Y N
Sbjct: 184 LVAGKLTPVKQEEEKATYAYNIKREQEKIDWTKPGEDVYNHIRGLNPWPVAYTTY--YGN 241
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISATE 243
KIW + +PGTI+++ H+GI+V G + IK+ ELQ + KK++ A +
Sbjct: 242 ---IWKIWWGEKVPAPKNAEPGTIIDIA-HDGIVVATGNETAIKITELQPSGKKRMDAAQ 297
Query: 244 FINGC 248
F+ G
Sbjct: 298 FLRGA 302
>gi|375085579|ref|ZP_09732212.1| methionyl-tRNA formyltransferase [Megamonas funiformis YIT 11815]
gi|374567184|gb|EHR38414.1| methionyl-tRNA formyltransferase [Megamonas funiformis YIT 11815]
Length = 311
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 131/311 (42%), Gaps = 83/311 (26%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT A LD L N +N+ + T+PD GRG KL SPVK+YALKH++ + QP
Sbjct: 6 IVFMGTPEFAVPCLDIL-NQHYNVTAVYTQPDRPKGRGQKLAMSPVKEYALKHNLPVYQP 64
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFDIMIVM----------------------------- 93
+K E L +++ D++IV+
Sbjct: 65 EKIK--------TPECVAELRELKPDLIIVVAFGQILSKEILDIPPLSCVNVHGSLLPRW 116
Query: 94 -GILPEDTSLTLQNKLEKLSKI----------LIIDTIKKIEYDMT-------------K 129
G P S+ +K ++ + +I+ +I DMT
Sbjct: 117 RGAAPIHWSIISGDKQTGITTMYMDVGLDTGDMILKATTEITPDMTTAQLHDKLMVQGAD 176
Query: 130 LFFKPQSNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPGAK 176
L + I E+ AP K+N+ + +DW+ SA+ I + N +P A
Sbjct: 177 LLLQTVQLIEENKAPREKQNDNLSCYAKMLNNDNCRIDWTKSAQDIHNLVRGLNSWPVA- 235
Query: 177 TYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
Y + NKK KIW+ + T PG I+ + I+V G+ I+LLE+Q NK
Sbjct: 236 --YTTLNNKK--FKIWQTKVTT--GTGNPGQIIKLT-KQSIIVATGEGAIELLEIQPPNK 288
Query: 237 KKISATEFING 247
K+ A+ +ING
Sbjct: 289 AKMPASSYING 299
>gi|145629885|ref|ZP_01785677.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 22.1-21]
gi|145639369|ref|ZP_01794974.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittII]
gi|144977739|gb|EDJ87686.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 22.1-21]
gi|145271416|gb|EDK11328.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittII]
Length = 318
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKK---FLKIWK 193
+YA + K EA L+WSLSA + R I AFNP+P A Y S ++K LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLNWSLSAMQLERNIRAFNPWPIA---YFSTEDKDGNAHTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AKVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQSAGKKPMSAQDLLNG 306
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIF+GT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFSGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|423720642|ref|ZP_17694824.1| methionyl-tRNA formyltransferase [Geobacillus thermoglucosidans
TNO-09.020]
gi|383365995|gb|EID43286.1| methionyl-tRNA formyltransferase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 318
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 127/305 (41%), Gaps = 65/305 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT + IL L ++I ++T+PD GR +L PVK A KH I ++QP
Sbjct: 4 IVFMGTPDFSVPILKRLIEDGYHIAAVVTQPDKPKGRKRELTPPPVKVEAEKHGIPVLQP 63
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y +I L+ F I + +LPE
Sbjct: 64 TKIREQEQYEQILALEPDLIVTAAFGQILPKALLEAPKYGCINVHASLLPELRGGAPIHY 123
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTI----KKIEYDMTKLFFK--PQ 135
T +T+ EKL I DT+ K+ KL + PQ
Sbjct: 124 AILQGKTKTGVTIMYMAEKLDAGDILTQVEVPITETDTVGTLHDKLSIAGAKLLSETIPQ 183
Query: 136 SNIGE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
G+ +YA IK+ + +DW+ + + I NP+P A T Y Y N
Sbjct: 184 LVAGKLTPVKQEEEKATYAYNIKREQEKIDWTKPGEDVYNHIRGLNPWPVAYTTY--YGN 241
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISATE 243
KIW ++ +PGTI+++ H+GI+V G + IK+ ELQ KK++ A +
Sbjct: 242 ---IWKIWWGEKVTAPKNAEPGTIIDIA-HDGIVVATGNETAIKITELQPAGKKRMDAAQ 297
Query: 244 FINGC 248
F+ G
Sbjct: 298 FLRGA 302
>gi|296108238|ref|YP_003619939.1| methionyl-tRNA formyltransferase [Legionella pneumophila 2300/99
Alcoy]
gi|295650140|gb|ADG25987.1| methionyl-tRNA formyltransferase [Legionella pneumophila 2300/99
Alcoy]
Length = 314
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 136/312 (43%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ ++FAGT + LD L S H++ + T+PD +GRG KL SPVK++A+ + + +
Sbjct: 4 LTVVFAGTPEFGLSCLDALIQSRHHLKAVYTQPDRPAGRGRKLQESPVKEWAINNQVPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
QP LN K + +E L+ ++ D+M+V+ ILP+
Sbjct: 64 QP----LNFKNQEAIDE----LSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLP 115
Query: 99 --------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLF 131
D L L K + + DT + + K+
Sbjct: 116 RWRGASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKATCPVTSSDTAGSLHDKLAKMS 175
Query: 132 FKPQSNIGESYAP-----LIKKNE------------AVLDWSLSAKTIMRKINAFNPFPG 174
KP ++ E+ A ++ NE A ++W SA I RKI AFNP+P
Sbjct: 176 VKPLLDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPV 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A T + L+I +A A I ST+ PG +LNV+ NG+LV N + + ++Q
Sbjct: 236 AYTLA-----GELMLRIHQAKATDIMSTEMPGMVLNVD-KNGMLVATNDNALLVEKIQFP 289
Query: 235 NKKKISATEFIN 246
K IS +++N
Sbjct: 290 GAKVISVRDWLN 301
>gi|375008140|ref|YP_004981773.1| methionyl-tRNA formyltransferase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359286989|gb|AEV18673.1| Methionyl-tRNA formyltransferase [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 319
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 67/306 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT A IL L + +++ ++T+PD GR + PVK A + I ++QP
Sbjct: 4 IVFMGTPDFAVPILRQLLDDGYHVAAVVTQPDKPKGRKREPVPPPVKVEAERRGIPVLQP 63
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y ++ L+ F I + +LPE
Sbjct: 64 TKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGGAPIHY 123
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKLFFK-------- 133
T +T+ +E+L I DT+ + ++ K
Sbjct: 124 AIWQGKTKTGVTIMYMVERLDAGDMLAQVEVPIAETDTVGTLHDKLSAAGAKLLSETLPL 183
Query: 134 ---------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
PQ +YAP I++ + +DW+ + I I AF+P+P ++Y
Sbjct: 184 LLEGNIAPVPQDEEKATYAPNIRREQERIDWTQPGEAIYNHIRAFHPWP------VTYTT 237
Query: 185 KKKFL-KIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISAT 242
+ + K+W + + PGTIL + NGI+V G + I++ ELQ KK+++A
Sbjct: 238 QDGHIWKVWWGEKVPAPRSAPPGTILALE-ENGIVVATGNETAIRITELQPAGKKRMAAG 296
Query: 243 EFINGC 248
EF+ G
Sbjct: 297 EFLRGA 302
>gi|16272566|ref|NP_438783.1| methionyl-tRNA formyltransferase [Haemophilus influenzae Rd KW20]
gi|260581532|ref|ZP_05849339.1| methionyl-tRNA formyltransferase [Haemophilus influenzae RdAW]
gi|1169712|sp|P44787.1|FMT_HAEIN RecName: Full=Methionyl-tRNA formyltransferase
gi|1573619|gb|AAC22283.1| methionyl-tRNA formyltransferase (fmt) [Haemophilus influenzae Rd
KW20]
gi|260091806|gb|EEW75762.1| methionyl-tRNA formyltransferase [Haemophilus influenzae RdAW]
Length = 318
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 16/174 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI LP +TS +L NKL +L+ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDI------LPTETSTSLYNKLAELAPSALIDVLDNLEN--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKK---FLKIWK 193
+YA + K EA L+WSLSA + R I AFNP+P A Y S ++K LK+++
Sbjct: 198 GSQSNYAEKLSKEEAQLNWSLSAMQLERNIRAFNPWPIA---YFSTEDKDGNAHTLKVYQ 254
Query: 194 AHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
A L K GTIL+ + NGI + V+ LL+LQ KK +SA + +NG
Sbjct: 255 AKVLP-HQDKPAGTILSAD-KNGIQIATVDGVLNLLQLQSAGKKPMSAQDLLNG 306
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L + NS+HN++ + T+PD +GRG KL SPVK+ A +++I +
Sbjct: 4 LNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGKKLQASPVKQLAEQNNIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPKSLR--------KEEAQSELKALNADVMVVVAYGLILP 95
>gi|419863991|ref|ZP_14386485.1| methionyl-tRNA formyltransferase [Escherichia coli O103:H25 str.
CVM9340]
gi|388341139|gb|EIL07282.1| methionyl-tRNA formyltransferase [Escherichia coli O103:H25 str.
CVM9340]
Length = 315
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLS+ + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSSAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|424817836|ref|ZP_18242987.1| methionyl-tRNA formyltransferase [Escherichia fergusonii ECD227]
gi|325498856|gb|EGC96715.1| methionyl-tRNA formyltransferase [Escherichia fergusonii ECD227]
Length = 315
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ Q + +K+WKA + + PGTIL +
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIQGQP--VKVWKASVIDTVTKSAPGTILEAS-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKILAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|253997898|ref|YP_003049961.1| methionyl-tRNA formyltransferase [Methylovorus glucosetrophus
SIP3-4]
gi|253984577|gb|ACT49434.1| methionyl-tRNA formyltransferase [Methylovorus glucosetrophus
SIP3-4]
Length = 316
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 14/183 (7%)
Query: 80 KLLNKIEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+++ ++ M+ G+LP DT+ +L + L + L++ + + + L +PQ
Sbjct: 140 EVVPALDAGAMVEKGVLPITERDTAQSLHDGLSAMGAQLMVKAMDTLATQRS-LPAEPQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+YA ++K EA +DW+ SA+ I R++ AFNPFP A+ + +IW A A
Sbjct: 199 EALVTYAAKLQKAEAGIDWTQSAEAISRQVRAFNPFPVAQAKL-----NEDICRIWMATA 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYF 255
+ + +PG +++V + I+V CG+ ++++ ELQ K++ A +F+ G +K F
Sbjct: 254 M--DGNAEPGVVVSVG--DAIVVGCGQGLLRIEELQMPGGKRLQAAQFMAGHALKPGDRF 309
Query: 256 ISV 258
SV
Sbjct: 310 HSV 312
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT A L L S+H +V++LT+PD +GRGMKL SPVK+ AL+H I ++
Sbjct: 4 LKIIFAGTPDFAVPALAALVASQHEVVMVLTQPDRPAGRGMKLKASPVKELALQHQIPVL 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP +LK +IA +E D+MIV
Sbjct: 64 QPETLKDADIQAQIA--------AVEADVMIV 87
>gi|237749121|ref|ZP_04579601.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes OXCC13]
gi|229380483|gb|EEO30574.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes OXCC13]
Length = 314
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT A+ L+ + + H+I L+LT+PD +GRGMK+ S VKK A+++ I +
Sbjct: 1 MKIVFAGTPEFASMALEAVKRNGHDIELVLTQPDRPAGRGMKMQPSAVKKTAMEYGIPVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP+SLK+NGKY + A + + +I D+M+V+ ILP++
Sbjct: 61 QPVSLKINGKYGEEAQRVYDKIRQIAPDVMVVVAYGLILPKE 102
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 104 LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIM 163
L ++L L +I +++++ L PQ+ +YA I K EA LD++L A I
Sbjct: 172 LHDQLAVLGGKMIASALERLD----TLVPVPQNETEANYAAKILKEEATLDFTLDATAIA 227
Query: 164 RKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGK 223
KI AFNPFPG +Y +KIWKA + S G I++ + NGI+V CG
Sbjct: 228 DKIRAFNPFPGCVAHYNDVP-----VKIWKAETANANSGAPAGKIVSAD-ENGIVVACGN 281
Query: 224 NVIKLLELQKNNKKKISATEFING 247
+ +LELQK K++ +EFI G
Sbjct: 282 GTLNILELQKPGAKRLPVSEFIKG 305
>gi|198282169|ref|YP_002218490.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665976|ref|YP_002424534.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|259646021|sp|B7J3C1.1|FMT_ACIF2 RecName: Full=Methionyl-tRNA formyltransferase
gi|259646022|sp|B5EJ84.1|FMT_ACIF5 RecName: Full=Methionyl-tRNA formyltransferase
gi|198246690|gb|ACH82283.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518189|gb|ACK78775.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 313
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DT+ +L ++L +L + + + + K PQ +YA +KK EA+LD
Sbjct: 159 IAADDTAASLHDRLARLGGKALRHVLDDLWAERLKPV--PQDPALVTYAHKLKKEEALLD 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W L A T+ R + AFNP P A T + + K L++W+A L + PG+I V
Sbjct: 217 WRLPAATLERLVRAFNPSPVAHTLF-----RDKGLRVWQARVLGAGGDQAPGSISAVE-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG++ ++LL +Q K +S ++F G
Sbjct: 271 DGVVVTCGEDRLQLLAVQPAGKGVLSGSDFARG 303
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+FAGT A L L +V + T+PD +GRG L SPVK+ AL I + Q
Sbjct: 6 RIVFAGTPEFARITLAELRQGPEAVVGVFTQPDRPAGRGRTLQASPVKQEALAAGIPVFQ 65
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
P S K E +LL + D++IV+ ILP+
Sbjct: 66 PESCK--------TGEALELLRSLAPDLLIVVAYGQILPQ 97
>gi|256823832|ref|YP_003147795.1| methionyl-tRNA formyltransferase [Kangiella koreensis DSM 16069]
gi|256797371|gb|ACV28027.1| methionyl-tRNA formyltransferase [Kangiella koreensis DSM 16069]
Length = 319
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 12/169 (7%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M++ LP +DT +L +KL + L+++ + K+ + +L PQ + +YA +
Sbjct: 151 MLLTASLPITEQDTGSSLHDKLAEQGAQLLVEALDKLSNN--QLSPTPQDDSLATYAHKL 208
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
K EA LDW LSA+ + R I AFN +P A + + ++IW+A+ ++ +PG
Sbjct: 209 SKAEAQLDWQLSAQELERTIRAFNSWPVAYSLI-----DEATVRIWQANVCQSQTKSEPG 263
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYF 255
IL + NGILV CG++ + L ELQ + +SA + +N KN + F
Sbjct: 264 VILQAD-SNGILVACGQDGLLLTELQLPGSRAMSAKDLLN-APKNQQLF 310
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT A L + S H +V + T+PD +GRG K++ SPVK+ AL+H I +
Sbjct: 5 LKVIFAGTPDFATGSLAAVLKSHHQVVAVYTQPDRKAGRGKKISMSPVKELALEHDIPVE 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QPI+ K + E+ L E D+M+V+ +LP+
Sbjct: 65 QPINFK--------SEESLAQLASYEADVMVVVAYGLLLPQ 97
>gi|253575777|ref|ZP_04853112.1| methionyl-tRNA formyltransferase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844820|gb|EES72833.1| methionyl-tRNA formyltransferase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 328
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 133/325 (40%), Gaps = 74/325 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M I+F GT A L+ L +N+V ++T+PD GR L +PVK+ AL+H + ++
Sbjct: 10 MNIVFMGTPAFAVPSLEGLLREGYNVVGVVTQPDRPQGRKKVLTPTPVKEAALRHGLPVL 69
Query: 61 QPISLK----------------LNGKYHKI-------------ANETHKLLNKIEFDIMI 91
QP ++ + Y +I N LL K I
Sbjct: 70 QPARMRAPEAVAEVAALQPDLIVTAAYGQILPKGVLDLPKYGCLNVHGSLLPKYRGGAPI 129
Query: 92 VMGIL--PEDTSLTLQNKLEKL-SKILIIDTIKKIEYDMTK--LFFK------------- 133
I+ ++T +TL E L + +I T+ I+ + T LF K
Sbjct: 130 QRAIMGGEKETGITLMYMAEGLDTGDMIAKTVVPIDDEDTSGTLFEKLSEAGARLLLEQL 189
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
PQ++ +YAP + + + +DWS +++ I ++ PF G T +
Sbjct: 190 PLILEGKAERIPQNDAEATYAPNLTREDERIDWSATSRQIYDRVRGLVPFAGGFTTW--- 246
Query: 183 QNKKKFLKIW----------KAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
N + F K+W A + S PGT+L ++ GI V G + L +Q
Sbjct: 247 -NGEVF-KVWAVAKPAEAGTSAGGAASTSEPAPGTVLELS-SQGIKVKTGDGAVWLTRVQ 303
Query: 233 KNNKKKISATEFINGCIKNIKYFIS 257
KK + A++FI G + + +S
Sbjct: 304 PAGKKAMEASDFIRGGVMQVGTVLS 328
>gi|153809824|ref|ZP_01962492.1| hypothetical protein RUMOBE_00205 [Ruminococcus obeum ATCC 29174]
gi|149834002|gb|EDM89082.1| methionyl-tRNA formyltransferase [Ruminococcus obeum ATCC 29174]
Length = 315
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 128/308 (41%), Gaps = 68/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK------ 54
MKI++ GT A L L + + + ++T+PD GRG L +PVK+ A+K
Sbjct: 1 MKIVYMGTPDFAVPPLAALVQNGYEVTAVVTQPDKPKGRGKTLLPTPVKEEAMKHDIPVY 60
Query: 55 HSIKIIQP-------------------------------------ISLKLNGKYHKIANE 77
+K+ +P I L KY A
Sbjct: 61 QPLKVREPEFVETLKKLEPDMIIVAAFGQIIPKTILDMPKYGCLNIHASLLPKYRGAAPI 120
Query: 78 THKLLNK--------------IEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+++ ++ MI ++P ++T +L +KL + L+I TI
Sbjct: 121 QQAVIDGEKESGVTIMQMGVGLDTGDMISQAVVPLAEDETGGSLFDKLAEEGAALLIRTI 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I D T ++ K YA +I K ++D+S SA + R + NP+P A T+
Sbjct: 181 PSI-VDGTAVYTKQPEESPTPYAAMISKKMGLMDFSKSAVELERLVRGLNPWPSAYTFL- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKK-PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
K LK+WK E K+ PGTI+ V+ +GI V CG + + L E+Q KK++
Sbjct: 239 ----NGKTLKVWKCAVERAECGKEAPGTIIGVD-KSGIHVACGSDTLILKEVQLEGKKRM 293
Query: 240 SATEFING 247
F+ G
Sbjct: 294 ETDAFLRG 301
>gi|392557231|ref|ZP_10304368.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas undina NCIMB
2128]
Length = 317
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
+TS +L KL +L +IDTI ++ ++ +PQ++ +YA + K+EA +DWS+
Sbjct: 163 ETSASLYTKLAELGPDALIDTINRLAN--GEITPEPQNDTDANYAKKLSKDEANIDWSMD 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ I R I AFNP+P T Q +KI++A+ +E + GT+L + NGI+
Sbjct: 221 AEQIERNIRAFNPWPVCFT-----QMSGNTVKIYQANV--VEQSGAAGTVL-ASDKNGIV 272
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CGK+ + + ELQ KK ++ +F+NG
Sbjct: 273 VACGKHALSIGELQPQGKKPMAINDFLNG 301
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L NSEH IV + ++PD +GRG KL S VK AL+H + +
Sbjct: 5 LRIIFAGTPDFAARHLQALINSEHQIVGVYSQPDRPAGRGKKLKASEVKALALEHDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK +E + LN + DIMIV+ ILP
Sbjct: 65 QPQSLK--------TDEALEELNSLNADIMIVVAYGLILP 96
>gi|402843870|ref|ZP_10892254.1| methionyl-tRNA formyltransferase [Klebsiella sp. OBRC7]
gi|423105144|ref|ZP_17092846.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5242]
gi|376381910|gb|EHS94646.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5242]
gi|402276035|gb|EJU25164.1| methionyl-tRNA formyltransferase [Klebsiella sp. OBRC7]
Length = 315
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ D+ + G I EDTS TL +KL L +I+T+K++
Sbjct: 130 AGDTETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGTLYDKLANLGPQGLIETLKQLAA 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
K + ++ + ++A + K EA +DWSL A + R I AFNP+P +I +
Sbjct: 190 GTAKPVVQDEAQV--THAQKLSKEEARIDWSLPAAQLERCIRAFNPWP---MSWIEIDGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+W+A + + +T +PGTI+ GI V V+ LL LQ KK +SA + +
Sbjct: 245 P--VKVWQASVIDVATTAEPGTIIEAT-KQGIQVATSDGVLNLLSLQPAGKKAMSAQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP SL+ E +L++ + D+M+V+
Sbjct: 65 QPASLR--------PQENQQLVSDLRADVMVVV 89
>gi|328545267|ref|YP_004305376.1| methionyl-tRNA formyltransferase [Polymorphum gilvum SL003B-26A1]
gi|326415009|gb|ADZ72072.1| Methionyl-tRNA formyltransferase [Polymorphum gilvum SL003B-26A1]
Length = 320
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 67/311 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+F GT + L + H +V ++P +GRGM L SPV + A I +
Sbjct: 3 LRIVFMGTPEFSVPTLMEIVGQGHEVVACYSQPPRPAGRGMDLRKSPVHEAAETLGIPVF 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL-------EKL 111
P SLK + + A + + + +++ IL P + L L L +
Sbjct: 63 TPTSLKDPQEQERFAALDADVAVVVAYGLLLPKPILEAPREGCLNLHASLLPRWRGAAPI 122
Query: 112 SKILI----------------IDT-------IKKIEYDMT-------------------- 128
++ +I +DT + I DMT
Sbjct: 123 NRAIIAGDRETGVEVMRMEEGLDTGPVCMSEVVPIGPDMTAGDLHDRLSTLGADLMVRAL 182
Query: 129 ------KLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
L PQ+ G +YA I K E +DW+ A + I +PFPGA ++
Sbjct: 183 AALSRGALMQTPQAETGATYAAKISKAECRIDWTKGAAAVHNHIRGLSPFPGAWC-EVAL 241
Query: 183 QNKKKFLKIWKAH------ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
+ + +K+ ++ A S + T GT+L+V+ +V CG ++LL++Q+ K
Sbjct: 242 GGRTERIKVLRSRVEARSEARSEDGTGVAGTVLDVS--EAPVVACGSGAVRLLQVQRAGK 299
Query: 237 KKISATEFING 247
K +S EF G
Sbjct: 300 KPMSGAEFQRG 310
>gi|420377551|ref|ZP_14877139.1| methionyl-tRNA formyltransferase [Shigella flexneri 1235-66]
gi|391295092|gb|EIQ53262.1| methionyl-tRNA formyltransferase [Shigella flexneri 1235-66]
Length = 315
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ D+ + G I EDTS +L +KL L +I+T+K++
Sbjct: 130 AGDTETGVTIMQMDVGLDTGDMLHKLSCPITAEDTSGSLYDKLADLGPQGLIETLKQLAA 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
K + +S + ++A + K EA +DWSLSA + R I AFNP+P ++ + +
Sbjct: 190 GTIKPVVQDESLV--THAEKLSKEEARIDWSLSAAQLERCIRAFNPWP---MSWLEIEGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+WKA +++ + PGTIL GI V G ++ L+ LQ KK +SA + +
Sbjct: 245 P--VKVWKASVIAVNTQSAPGTILEAT-KQGIQVATGDGILNLIALQPAGKKAMSAQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L++ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVSDLHADVMVVVAYGLILP 96
>gi|154685989|ref|YP_001421150.1| hypothetical protein RBAM_015560 [Bacillus amyloliquefaciens FZB42]
gi|166214872|sp|A7Z4J3.1|FMT_BACA2 RecName: Full=Methionyl-tRNA formyltransferase
gi|154351840|gb|ABS73919.1| Fmt [Bacillus amyloliquefaciens FZB42]
Length = 317
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 69/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK A +H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLF---- 131
T +T+ +EKL +I I ++E D T KL
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSIAGAKLLSETV 181
Query: 132 -------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
KP Q +YAP IK+ + +DW+ + I +I NP+P A T ++
Sbjct: 182 PNVISGNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYT-TLNG 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISA 241
QN +K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++
Sbjct: 241 QN----MKVWASEKVAAKTEAAPGTVIRTE-QNGIVVASGNSTALLITELQPAGKKRMKG 295
Query: 242 TEFINGCIKNIK 253
+F+ G KN++
Sbjct: 296 EDFVRG--KNVQ 305
>gi|415886520|ref|ZP_11548300.1| methionyl-tRNA formyltransferase [Bacillus methanolicus MGA3]
gi|387587207|gb|EIJ79530.1| methionyl-tRNA formyltransferase [Bacillus methanolicus MGA3]
Length = 318
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 133/310 (42%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL L + I+ ++T+PD GR L PVK A KH I I Q
Sbjct: 3 KIVFMGTPDFSVPILKQLVQDGYEIIGVVTQPDRPVGRKKILTPPPVKVEAEKHGIPIFQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++ + KI L+ F I + +LPE
Sbjct: 63 PEKIRNPEELEKILALKPDLIVTAAFGQILPKELLEAPKFGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKL--------SKILII--DTIKKIEYDMTKLFFK------- 133
T +T+ +EKL ++++I DT+ + +++ K
Sbjct: 123 YAILQGKKKTGITIMYMVEKLDAGDILTQAEVMITDEDTVGTLHDKLSETGAKLLSETIP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ+ +Y+ IK+ + +DWS + + I I NP+P A T
Sbjct: 183 KLIKGELKPIPQNEEEATYSYNIKREQEKIDWSKNGEDIYNHIRGMNPWPVAYTTM---- 238
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
LKIW+ + ++ T +PGTIL ++ +GI+V G + IK+ ELQ + KK+++A
Sbjct: 239 -NHSVLKIWRGEKVPVKETSEPGTILAIS-KDGIIVSTGDDTAIKITELQPSGKKRMTAE 296
Query: 243 EFINGCIKNI 252
+F+ G I
Sbjct: 297 QFLRGAGSQI 306
>gi|421873664|ref|ZP_16305276.1| methionyl-tRNA formyltransferase [Brevibacillus laterosporus GI-9]
gi|372457451|emb|CCF14825.1| methionyl-tRNA formyltransferase [Brevibacillus laterosporus GI-9]
Length = 317
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 134/315 (42%), Gaps = 74/315 (23%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT A L+ L + + +V ++T+PD GR L PVK+ AL+H + + Q
Sbjct: 5 RILFMGTPDFATQSLEALITNGYQVVGVVTQPDRPVGRKRVLTPPPVKELALRHGLPVYQ 64
Query: 62 -------------------------------PISLKLNGKYHKIANETHKLLNK------ 84
P+SL L H N LL K
Sbjct: 65 PEKIRESESVQSVLDATRPDLIVTAAYGQILPVSL-LEAPKHGCINIHASLLPKYRGGAP 123
Query: 85 ----------------------IEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDT 119
++ MI I+P DT+ ++ KL L+I+T
Sbjct: 124 IHASIINGEKETGVTIMYMVQALDAGDMISKVIVPIEERDTAASMFEKLATAGADLLIET 183
Query: 120 IKKI-EYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+ K+ + ++T +PQ++ ++AP IK+ LDW+ SA+ I ++ N +P A T
Sbjct: 184 LPKLLKGEITP---EPQNHEEATFAPNIKRENERLDWNKSAREIYNQVRGMNSWPVAFTT 240
Query: 179 YISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
+ + K K+W A + + PGTI+ +G+++ CG I L E+Q KK
Sbjct: 241 F-----EGKVWKVWWAEVVELAGQLATPGTIIG-RTEDGLIIACGAGSIILKEIQPEGKK 294
Query: 238 KISATEFINGCIKNI 252
++S +F+ G +I
Sbjct: 295 RMSVYDFLRGAGASI 309
>gi|384516918|ref|YP_005704223.1| methionyl-tRNA formyltransferase [Enterococcus faecalis 62]
gi|323479051|gb|ADX78490.1| methionyl-tRNA formyltransferase [Enterococcus faecalis 62]
Length = 313
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH+I ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNILVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWKKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|301021179|ref|ZP_07185215.1| methionyl-tRNA formyltransferase, partial [Escherichia coli MS
196-1]
gi|299881626|gb|EFI89837.1| methionyl-tRNA formyltransferase [Escherichia coli MS 196-1]
Length = 297
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 141 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 198
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGT L N
Sbjct: 199 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTTLEAN-K 252
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 253 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 284
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 11/85 (12%)
Query: 16 LDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIA 75
L L +S HN+V + T+PD +GRG KL SPVK A + + + QP+SL+
Sbjct: 2 LAALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLR--------P 53
Query: 76 NETHKLLNKIEFDIMIVMG---ILP 97
E +L+ +++ D+M+V+ ILP
Sbjct: 54 QENQQLVAELQADVMVVVAYGLILP 78
>gi|90581175|ref|ZP_01236974.1| methionyl-tRNA formyltransferase [Photobacterium angustum S14]
gi|90437696|gb|EAS62888.1| methionyl-tRNA formyltransferase [Vibrio angustum S14]
Length = 314
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 19/182 (10%)
Query: 75 ANETHKLLNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ DI M+ + LP DTS T+ KL L +ID + I
Sbjct: 130 AGDTETGVTIMQMDIGLDTGDMLKVATLPIEATDTSATMYEKLADLGPDALIDCLSDI-A 188
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY-ISYQN 184
+ T + K + +YA + K EA++DWS+ A I R + AFNP+P +Y+ ++ QN
Sbjct: 189 NGTAVAVKQDDELA-NYAKKLSKEEALIDWSMDAAAIERCVRAFNPWP--MSYFTVAEQN 245
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+K+W+A + K PGTIL+ + GILV G ++LL LQ KK ++A +
Sbjct: 246 ----IKVWQAAVETDNQGKAPGTILSAD-KQGILVATGNGALRLLSLQPPGKKAMTAADL 300
Query: 245 IN 246
+N
Sbjct: 301 LN 302
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +S+H +V + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSQHQVVAVYTQPDRPAGRGKKLTASPVKNIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ E + L IE DIM+V+ +LP++
Sbjct: 65 QPASLR--------NEEAQQELAAIEADIMVVVAYGLLLPQE 98
>gi|419960318|ref|ZP_14476360.1| methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
gi|388604810|gb|EIM34038.1| methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
Length = 315
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL L +I+T++++ + + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSATLYDKLADLGPQGLIETLQQLADNTATPEVQDEAQV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ ++ +K+WKA ++ ++ +PGTI++ +
Sbjct: 217 WSLSAAQLERCIRAFNPWP------MSWMMIDEQPVKVWKASVINGNTSAEPGTIIDAS- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
NGI V G+ ++ L LQ KK +SA + +N ++FI
Sbjct: 270 KNGIQVATGEGILNLESLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H IV + T+PD +GRG KL PVK A H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGKKLMPGPVKVLAETHDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPASLR--------PEENQQLVADLNADVMVVVAYGLILP 96
>gi|255974265|ref|ZP_05424851.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T2]
gi|255967137|gb|EET97759.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T2]
Length = 314
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 4 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 63
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 64 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 123
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 124 YSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLP 183
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 184 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 240
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 241 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 297
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 298 EFLNGVGQNV 307
>gi|365972377|ref|YP_004953938.1| methionyl-tRNA formyltransferase [Enterobacter cloacae EcWSU1]
gi|365751290|gb|AEW75517.1| Methionyl-tRNA formyltransferase [Enterobacter cloacae EcWSU1]
Length = 315
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 93/163 (57%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I+T+++I + K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSATLYDKLAELGPQGLIETLQQIANNTAKPEVQDEALV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ ++ +K+WKA + +T +PGTI++ +
Sbjct: 217 WSLSAAQLERCIRAFNPWP------MSWMVIDEQPVKVWKASLIDGHTTAEPGTIIDAS- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
NGI V + ++ L LQ KK +SA + +N ++FI
Sbjct: 270 KNGIQVATAQGILNLESLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL PVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAGRGKKLMPGPVKVLAEEHGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPASLR--------PQENQQLVADLNADVMVVVAYGLILP 96
>gi|291296559|ref|YP_003507957.1| methionyl-tRNA formyltransferase [Meiothermus ruber DSM 1279]
gi|290471518|gb|ADD28937.1| methionyl-tRNA formyltransferase [Meiothermus ruber DSM 1279]
Length = 318
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 135/308 (43%), Gaps = 74/308 (24%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
++ F G+ A +L+ LY +H +VL++T+PD +GRG+KL PV +A +++ +
Sbjct: 15 RVAFFGSPAWAVPVLEALYQ-QHQVVLVVTQPDKPAGRGLKLTPCPVAAWAEARGLRVEK 73
Query: 62 PISLKLN--------------------------------------------GKYHKIA-- 75
P L+ N KY A
Sbjct: 74 PARLRKNLEFTELFREIAPEVAVTAAYGKILPAELLAIPRFGFLNLHPSDLPKYRGPAPV 133
Query: 76 ------NETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
ET + ++ D+ + G + P++T++ L N+L I+ +
Sbjct: 134 QWTLIHGETETAVCIMQTDVGMDTGPVVARWRTPVGPDETAVELSNRLRDKG----IELL 189
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ D+ L +PQ +G ++AP+++K++ + W SA I + P+PG+
Sbjct: 190 LEALADLEHLQPQPQPALG-THAPMLQKDDGKIVWERSADEIYNRHRGVQPWPGS----- 243
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++++ + +K+ + +E +PGT+L++ +G++V G+ + L E+Q KK +
Sbjct: 244 WFEHRGRRVKVLQMSRGPLEQILEPGTVLHIA--DGLMVAAGQGSLLLKEVQPEGKKPMP 301
Query: 241 ATEFINGC 248
A ++ G
Sbjct: 302 AADWARGA 309
>gi|257420430|ref|ZP_05597420.1| methionyl-tRNA formyltransferase [Enterococcus faecalis X98]
gi|422708018|ref|ZP_16765552.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0043]
gi|257162254|gb|EEU92214.1| methionyl-tRNA formyltransferase [Enterococcus faecalis X98]
gi|315154708|gb|EFT98724.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0043]
Length = 313
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 MLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|336236101|ref|YP_004588717.1| methionyl-tRNA formyltransferase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362956|gb|AEH48636.1| Methionyl-tRNA formyltransferase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 318
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 126/305 (41%), Gaps = 65/305 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT + IL L ++I ++T+PD GR +L PVK A KH I ++QP
Sbjct: 4 IVFMGTPDFSVPILKRLIEDGYHIAAVVTQPDKPKGRKRELTPPPVKVEAEKHGIPVLQP 63
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y +I L+ F I + +LPE
Sbjct: 64 TKIREQEQYEQILALEPDLIVTAAFGQILPKALLEAPKYGCINVHASLLPELRGGAPIHY 123
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTI----KKIEYDMTKLFFK--PQ 135
T +T+ EKL I DT+ K+ KL + PQ
Sbjct: 124 AILQGKTKTGVTIMYMAEKLDAGDILTQVEVPITETDTVGTLHDKLSIAGAKLLSETIPQ 183
Query: 136 SNIGE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
G+ +YA IK+ + +DW+ + + I NP+P A T Y Y N
Sbjct: 184 LVAGKLTPVKQEEEKATYAYNIKREQEKIDWTKPGEDVYNHIRGLNPWPVAYTTY--YGN 241
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISATE 243
KIW + +PGTI+++ H+GI+V G + IK+ ELQ KK++ A +
Sbjct: 242 ---IWKIWWGEKVPAPKNAEPGTIIDIA-HDGIVVATGNETAIKITELQPAGKKRMDAAQ 297
Query: 244 FINGC 248
F+ G
Sbjct: 298 FLRGA 302
>gi|401679003|ref|ZP_10810951.1| Fmt Protein [Enterobacter sp. SST3]
gi|400213723|gb|EJO44661.1| Fmt Protein [Enterobacter sp. SST3]
Length = 315
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DTS TL +KL +L +I+T++++ + K + + + +YA + K EA +D
Sbjct: 159 ITSDDTSATLYDKLAELGPQGLIETLQQLADNTAKPEVQDDALV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + ++ +K+WKA +S +T +PGTI++ +
Sbjct: 217 WSLSAAQLERCIRAFNPWP------MSWLEIDEQPVKVWKASVISGATTAEPGTIIDAS- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
NGI V + ++ L LQ KK +SA + +N ++FI
Sbjct: 270 KNGIQVATAQGILNLESLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAGRGKKLMPSPVKVLAEEHGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPASLR--------PQENQQLVADLNADVMVVVAYGLILP 96
>gi|257088234|ref|ZP_05582595.1| methionyl-tRNA formyltransferase [Enterococcus faecalis D6]
gi|422723542|ref|ZP_16780077.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2137]
gi|256996264|gb|EEU83566.1| methionyl-tRNA formyltransferase [Enterococcus faecalis D6]
gi|315026430|gb|EFT38362.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2137]
Length = 313
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEQILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|229547452|ref|ZP_04436177.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1322]
gi|256854794|ref|ZP_05560158.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T8]
gi|422687000|ref|ZP_16745190.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4000]
gi|229307484|gb|EEN73471.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1322]
gi|256710354|gb|EEU25398.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T8]
gi|315028354|gb|EFT40286.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4000]
Length = 313
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNIAREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|29377579|ref|NP_816733.1| methionyl-tRNA formyltransferase [Enterococcus faecalis V583]
gi|227554543|ref|ZP_03984590.1| methionyl-tRNA formyltransferase [Enterococcus faecalis HH22]
gi|256618122|ref|ZP_05474968.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 4200]
gi|256958400|ref|ZP_05562571.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DS5]
gi|256962962|ref|ZP_05567133.1| methionyl-tRNA formyltransferase [Enterococcus faecalis HIP11704]
gi|257078289|ref|ZP_05572650.1| methionyl-tRNA formyltransferase [Enterococcus faecalis JH1]
gi|257417967|ref|ZP_05594961.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T11]
gi|294779980|ref|ZP_06745360.1| methionyl-tRNA formyltransferase [Enterococcus faecalis PC1.1]
gi|300861569|ref|ZP_07107653.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TUSoD Ef11]
gi|307270562|ref|ZP_07551860.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4248]
gi|307273622|ref|ZP_07554850.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0855]
gi|307284852|ref|ZP_07565008.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0860]
gi|307292140|ref|ZP_07572006.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0411]
gi|384514351|ref|YP_005709444.1| methionyl-tRNA formyltransferase [Enterococcus faecalis OG1RF]
gi|397701268|ref|YP_006539056.1| methionyl-tRNA formyltransferase [Enterococcus faecalis D32]
gi|422696069|ref|ZP_16754046.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4244]
gi|422698513|ref|ZP_16756405.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1346]
gi|422700441|ref|ZP_16758288.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1342]
gi|422711159|ref|ZP_16768092.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0027]
gi|422713872|ref|ZP_16770620.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0309A]
gi|422718503|ref|ZP_16775156.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0309B]
gi|422720859|ref|ZP_16777466.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0017]
gi|422728591|ref|ZP_16784999.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0012]
gi|422740057|ref|ZP_16795214.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2141]
gi|422868040|ref|ZP_16914594.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1467]
gi|424674076|ref|ZP_18111002.1| methionyl-tRNA formyltransferase [Enterococcus faecalis 599]
gi|428768233|ref|YP_007154344.1| methionyl-tRNA formyltransferase [Enterococcus faecalis str.
Symbioflor 1]
gi|430360177|ref|ZP_19426154.1| methionyl-tRNA formyltransferase [Enterococcus faecalis OG1X]
gi|430366207|ref|ZP_19427388.1| methionyl-tRNA formyltransferase [Enterococcus faecalis M7]
gi|33516854|sp|Q82ZD8.1|FMT_ENTFA RecName: Full=Methionyl-tRNA formyltransferase
gi|29345046|gb|AAO82803.1| methionyl-tRNA formyltransferase [Enterococcus faecalis V583]
gi|227176341|gb|EEI57313.1| methionyl-tRNA formyltransferase [Enterococcus faecalis HH22]
gi|256597649|gb|EEU16825.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 4200]
gi|256948896|gb|EEU65528.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DS5]
gi|256953458|gb|EEU70090.1| methionyl-tRNA formyltransferase [Enterococcus faecalis HIP11704]
gi|256986319|gb|EEU73621.1| methionyl-tRNA formyltransferase [Enterococcus faecalis JH1]
gi|257159795|gb|EEU89755.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T11]
gi|294452961|gb|EFG21383.1| methionyl-tRNA formyltransferase [Enterococcus faecalis PC1.1]
gi|295114432|emb|CBL33069.1| methionyl-tRNA formyltransferase [Enterococcus sp. 7L76]
gi|300849030|gb|EFK76783.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TUSoD Ef11]
gi|306496793|gb|EFM66344.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0411]
gi|306503111|gb|EFM72368.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0860]
gi|306509635|gb|EFM78677.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0855]
gi|306513143|gb|EFM81777.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4248]
gi|315031808|gb|EFT43740.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0017]
gi|315034824|gb|EFT46756.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0027]
gi|315144146|gb|EFT88162.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2141]
gi|315146583|gb|EFT90599.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4244]
gi|315150900|gb|EFT94916.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0012]
gi|315171199|gb|EFU15216.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1342]
gi|315172962|gb|EFU16979.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1346]
gi|315573271|gb|EFU85462.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0309B]
gi|315581155|gb|EFU93346.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0309A]
gi|327536240|gb|AEA95074.1| methionyl-tRNA formyltransferase [Enterococcus faecalis OG1RF]
gi|329576775|gb|EGG58268.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1467]
gi|397337907|gb|AFO45579.1| methionyl-tRNA formyltransferase [Enterococcus faecalis D32]
gi|402352020|gb|EJU86885.1| methionyl-tRNA formyltransferase [Enterococcus faecalis 599]
gi|427186406|emb|CCO73630.1| methionyl-tRNA formyltransferase [Enterococcus faecalis str.
Symbioflor 1]
gi|429513089|gb|ELA02682.1| methionyl-tRNA formyltransferase [Enterococcus faecalis OG1X]
gi|429517221|gb|ELA06688.1| methionyl-tRNA formyltransferase [Enterococcus faecalis M7]
Length = 313
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|331659578|ref|ZP_08360516.1| methionyl-tRNA formyltransferase [Escherichia coli TA206]
gi|417285224|ref|ZP_12072515.1| methionyl-tRNA formyltransferase [Escherichia coli TW07793]
gi|422371097|ref|ZP_16451480.1| methionyl-tRNA formyltransferase [Escherichia coli MS 16-3]
gi|425302147|ref|ZP_18692030.1| methionyl-tRNA formyltransferase [Escherichia coli 07798]
gi|432900552|ref|ZP_20110931.1| methionyl-tRNA formyltransferase [Escherichia coli KTE192]
gi|433030198|ref|ZP_20218048.1| methionyl-tRNA formyltransferase [Escherichia coli KTE109]
gi|315297153|gb|EFU56433.1| methionyl-tRNA formyltransferase [Escherichia coli MS 16-3]
gi|331052793|gb|EGI24826.1| methionyl-tRNA formyltransferase [Escherichia coli TA206]
gi|386250465|gb|EII96632.1| methionyl-tRNA formyltransferase [Escherichia coli TW07793]
gi|408211314|gb|EKI35862.1| methionyl-tRNA formyltransferase [Escherichia coli 07798]
gi|431423507|gb|ELH05633.1| methionyl-tRNA formyltransferase [Escherichia coli KTE192]
gi|431540946|gb|ELI16397.1| methionyl-tRNA formyltransferase [Escherichia coli KTE109]
Length = 315
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ DI + G I EDTS TL +KL +L +I T+K++
Sbjct: 130 AGDTETGVTIMQMDIGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLAD 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
K + ++ + +YA + K EA +DWSLSA + R I AFNP+P ++ + +
Sbjct: 190 GTAKPEVQDETLV--TYAEKLSKEEARIDWSLSAAQLERCIRAFNPWP---MSWLEIEGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+WKA + + PGTIL N GI V G ++ LL +Q KK +S + +
Sbjct: 245 P--VKVWKASVIDTTTKAAPGTILEAN-KQGIQVATGDGILNLLSMQPAGKKAMSVQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|19552812|ref|NP_600814.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum ATCC
13032]
gi|62390482|ref|YP_225884.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum ATCC
13032]
gi|145295721|ref|YP_001138542.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum R]
gi|418245826|ref|ZP_12872227.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum ATCC
14067]
gi|23821551|sp|Q8NQ47.1|FMT_CORGL RecName: Full=Methionyl-tRNA formyltransferase
gi|166214891|sp|A4QEH4.1|FMT_CORGB RecName: Full=Methionyl-tRNA formyltransferase
gi|21324369|dbj|BAB98993.1| Methionyl-tRNA formyltransferase [Corynebacterium glutamicum ATCC
13032]
gi|41325819|emb|CAF21608.1| METHIONYL-TRNA FORMYLTRANSFERASE [Corynebacterium glutamicum ATCC
13032]
gi|140845641|dbj|BAF54640.1| hypothetical protein [Corynebacterium glutamicum R]
gi|354510110|gb|EHE83038.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum ATCC
14067]
gi|385143719|emb|CCH24758.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum K051]
Length = 315
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 66/310 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A L L +S+H +V +LT+PD GRG L+ S V + A +H I+++
Sbjct: 1 MRLVFAGTPEPAVVALQKLIDSDHEVVAVLTQPDARRGRGRTLHPSAVAELAQQHGIEVL 60
Query: 61 QPISLKLNGK-----YHKIANETHKLLNKIEFDIMIV----------------------M 93
+P SLK + + ++A L + + +I
Sbjct: 61 KPTSLKADTEDGQAIRQRLAELAPDCLPVVAYGQLITKDLLDVAPHGWVNLHFSLLPAWR 120
Query: 94 GILPEDTSLTLQNKL---------EKLSKILIIDTIK--------------KIEYDMTKL 130
G P S+ +++ E L +I+ TI+ ++ Y L
Sbjct: 121 GAAPVQASIREGDQITGATTFRIDEGLDTGVILSTIEDTIQPTDTADDLLTRLAYSGGDL 180
Query: 131 FFK-----------PQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+ P++ GE+ YA I +A +DWS A+ I R I A P PGA T
Sbjct: 181 LVETMTGLEQGTITPRAQEGEATYASKITTQDAQIDWSKPAEVIDRHIRAHTPGPGAWTT 240
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ + K I + + + + PG IL N ++V G I L +Q KK
Sbjct: 241 LVDA--RLKVGPISHSGEVEVAADLAPGAILAQK--NSVVVGTGTTPIVLGNIQPPGKKM 296
Query: 239 ISATEFINGC 248
++A ++ G
Sbjct: 297 MNAADWARGV 306
>gi|423126057|ref|ZP_17113736.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5250]
gi|376397629|gb|EHT10259.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5250]
Length = 315
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL L +I+T+K++ K + ++ + ++A + K EA ++
Sbjct: 159 ITAEDTSGTLYDKLANLGPQGLIETLKQLATGTAKPVVQDEALV--THAQKLSKEEAHIN 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P +I + +K+W+A +++ +T +PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWIEIDGQP--VKVWQASVINMATTAEPGTILEAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G V+ LL LQ KK +SA + +N
Sbjct: 271 RGIQVATGDGVLNLLSLQPAGKKAMSAQDLLN 302
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP+SL+ E +L++ + DIM+V+
Sbjct: 65 QPVSLR--------PQENQQLVSDLRADIMVVV 89
>gi|417970657|ref|ZP_12611588.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum S9114]
gi|344044953|gb|EGV40627.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum S9114]
Length = 315
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 66/310 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A L L +S+H +V +LT+PD GRG L+ S V + A +H I+++
Sbjct: 1 MRLVFAGTPEPAVVALQKLIDSDHEVVAVLTQPDARRGRGRTLHPSAVAELAQQHGIEVL 60
Query: 61 QPISLKLNGK-----YHKIANETHKLLNKIEFDIMIV----------------------M 93
+P SLK + + ++A L + + +I
Sbjct: 61 KPTSLKADTEDGQAIRQRLAELAPDCLPVVAYGQLITKDLLDVAPHGWVNLHFSLLPAWR 120
Query: 94 GILPEDTSLTLQNKL---------EKLSKILIIDTIK--------------KIEYDMTKL 130
G P S+ +++ E L +I+ TI+ ++ Y L
Sbjct: 121 GAAPVQASIREGDQITGATTFRIDEGLDTGVILSTIEDTIQATDTADDLLTRLAYSGGDL 180
Query: 131 FFK-----------PQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+ P++ GE+ YA I +A +DWS A+ I R I A P PGA T
Sbjct: 181 LVETMTGLEQGTITPRAQEGEATYASKITTQDAQIDWSKPAEVIDRHIRAHTPGPGAWTT 240
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ + K I + + + + PG IL N ++V G I L +Q KK
Sbjct: 241 LVDA--RLKVGPISHSGEVEVAADLAPGAILAQK--NSVVVGTGTTPIVLGNIQPPGKKM 296
Query: 239 ISATEFINGC 248
++A ++ G
Sbjct: 297 MNAADWARGV 306
>gi|256960469|ref|ZP_05564640.1| methionyl-tRNA formyltransferase [Enterococcus faecalis Merz96]
gi|257080478|ref|ZP_05574839.1| methionyl-tRNA formyltransferase [Enterococcus faecalis E1Sol]
gi|293385127|ref|ZP_06630953.1| methionyl-tRNA formyltransferase [Enterococcus faecalis R712]
gi|293389100|ref|ZP_06633572.1| methionyl-tRNA formyltransferase [Enterococcus faecalis S613]
gi|307276656|ref|ZP_07557774.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2134]
gi|312902127|ref|ZP_07761387.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0470]
gi|312906689|ref|ZP_07765689.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DAPTO 512]
gi|312910849|ref|ZP_07769685.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DAPTO 516]
gi|421513183|ref|ZP_15959966.1| Methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 29212]
gi|256950965|gb|EEU67597.1| methionyl-tRNA formyltransferase [Enterococcus faecalis Merz96]
gi|256988508|gb|EEU75810.1| methionyl-tRNA formyltransferase [Enterococcus faecalis E1Sol]
gi|291077604|gb|EFE14968.1| methionyl-tRNA formyltransferase [Enterococcus faecalis R712]
gi|291081568|gb|EFE18531.1| methionyl-tRNA formyltransferase [Enterococcus faecalis S613]
gi|306506766|gb|EFM75918.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2134]
gi|310627337|gb|EFQ10620.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DAPTO 512]
gi|311288872|gb|EFQ67428.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DAPTO 516]
gi|311290791|gb|EFQ69347.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0470]
gi|401673723|gb|EJS80098.1| Methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 29212]
Length = 313
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|452966645|gb|EME71654.1| methionyl-tRNA formyltransferase [Magnetospirillum sp. SO-1]
Length = 309
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 123/314 (39%), Gaps = 86/314 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT + ILD+L + H +V ++P +GRG K +PV +A + I +
Sbjct: 1 MKLVFMGTPDFSVPILDSLIEAGHQVVCTYSQPPRPAGRGHKEQPTPVHAFAHQRGIPVR 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE------------------- 98
P SLK + E ++ D+ +V ILP+
Sbjct: 61 TPKSLK--------SPEACSEFAALDADVAVVAAYGLILPQAVLDAPRLGCLNVHASLLP 112
Query: 99 --------------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDM----- 127
D L L K S +L+ DT +DM
Sbjct: 113 RWRGAAPIQRAILAGDHETGVTIMQMDAGLDTGAMLLKESILLLPDTTASWLHDMLAAMG 172
Query: 128 --------------TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
L PQ G +YA + K E +LDWS A + RK+ A NP+P
Sbjct: 173 ARMIVDAVGRLEAEEPLPATPQPAEGVTYAHKLAKEEGLLDWSRPAVELDRKVRALNPWP 232
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
G + ++ + +K+ +A + PGT+L+ + V CGK ++ L++Q+
Sbjct: 233 G-----VWFEMGGERVKVIEAAV--VPGAGPPGTVLDGQ----LTVACGKFALRPLKVQR 281
Query: 234 NNKKKISATEFING 247
K ++ +E + G
Sbjct: 282 AGKAAMTVSEMLRG 295
>gi|406979211|gb|EKE01043.1| hypothetical protein ACD_21C00232G0003 [uncultured bacterium]
Length = 311
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 133/315 (42%), Gaps = 84/315 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT A L+ L+NS H I + TKPD +GRG K+ S VKK+A H++ +
Sbjct: 1 MRIIFAGTPDFALPALEALFNSPHKICAVYTKPDRPAGRGQKITASAVKKWASAHNLPVY 60
Query: 61 QPISLKLNGKYHKIANETH-KLLNKIEFDIMIVMG---ILPEDT---------------- 100
QP +LK + TH K L + D +I + ILPE
Sbjct: 61 QPETLK---------DLTHQKQLQDLAADALIDVAYGLILPEAVLNMFKCCINIHPSLLP 111
Query: 101 ----SLTLQNKLEKLSK----------------------ILIIDTIK-------KIEYDM 127
+ +Q +E + +L IDT K
Sbjct: 112 RWRGAAPIQRAIEACDRATGVTIMQIDAGLDTGGIYKQEVLPIDTTDTTATLSVKAASLG 171
Query: 128 TKLFFKPQSNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFPG 174
KL + +NI A + +N+A +DW SA I I AFNP+P
Sbjct: 172 AKLLLEVLTNIEAGRAKITVQNDAQSTYAKKITKEEGRIDWQKSALEIDCMIRAFNPWP- 230
Query: 175 AKTYYISYQN-KKKFLKIWKAHALSIES-TKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
++Y + ++IW+A +I+S + GTI+ + NG+ V G V++L+++Q
Sbjct: 231 -----VAYAEIDGQVVRIWQAETQNIDSKSADLGTIIQAS-KNGVDVATGDGVLRLIKIQ 284
Query: 233 KNNKKKISATEFING 247
+ K + + +N
Sbjct: 285 LSGGKPLLIADILNA 299
>gi|257083203|ref|ZP_05577564.1| methionyl-tRNA formyltransferase [Enterococcus faecalis Fly1]
gi|256991233|gb|EEU78535.1| methionyl-tRNA formyltransferase [Enterococcus faecalis Fly1]
Length = 313
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSDPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|343507207|ref|ZP_08744649.1| methionyl-tRNA formyltransferase [Vibrio ichthyoenteri ATCC 700023]
gi|342800227|gb|EGU35767.1| methionyl-tRNA formyltransferase [Vibrio ichthyoenteri ATCC 700023]
Length = 315
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ T PD +GRG KL S VK AL+H+I +
Sbjct: 5 LRIVFAGTPDFAALHLAALLSSEHEVIAAYTNPDRPAGRGKKLTASAVKNVALEHNIPVY 64
Query: 61 QPISLKLNGKYHKIAN--------------------ETHKL------------------- 81
QP + K + ++A+ +T KL
Sbjct: 65 QPENFKSDEAKQQLADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAAPI 124
Query: 82 ------------LNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ ++ DI M+ + LP DTS ++ KL +L + +++ +
Sbjct: 125 QRSIWAGDAETGVTIMQMDIGLDTGDMLKVATLPIEATDTSTSMYAKLAELGPVALVECL 184
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
I T + K + +YA + K EA ++W+ A I R + AFNP+P +
Sbjct: 185 NDIAAG-TAVAVKQDDELA-NYAKKLSKEEARIEWNDDAAHIERCVRAFNPWPMSH---- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ + +K+W++ + GTI+ + GI V G V+ L +LQ KK +S
Sbjct: 239 -FEVAENSIKVWQSRVADQSCDQPAGTIIQAD-KTGIYVATGNGVLVLEQLQVPGKKAMS 296
Query: 241 ATEFIN 246
+ +N
Sbjct: 297 VQDILN 302
>gi|410479885|ref|YP_006767522.1| methionyl-tRNA formyltransferase [Leptospirillum ferriphilum ML-04]
gi|406775137|gb|AFS54562.1| methionyl-tRNA formyltransferase [Leptospirillum ferriphilum ML-04]
Length = 319
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 129/315 (40%), Gaps = 83/315 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++F GT A L+ L + +V + T+PD +GRG L+ SPV++ A I ++
Sbjct: 8 IRVVFMGTPQIAVPFLEALVEKRYAVVGVFTQPDKPAGRGYTLHSSPVRRAAESRGIPVM 67
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
P SLK + ++L + D+++V+ ILP++
Sbjct: 68 TPGSLKTEDDW--------RILREWSPDVIVVVAYGKILPKEMLQLPRFGCLNVHASLLP 119
Query: 100 ------------------TSLTLQNKLEKLSKILIIDTIK-KIEYDMTKLFFK------- 133
+ LTL E + ++D + I D T L
Sbjct: 120 ELRGASPIQWAILKGLAVSGLTLMKMDEGMDTGPVLDQCQIAINPDETSLTLMEKMMDQG 179
Query: 134 -------------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
PQS + APLI+KN LD++ +A+ + R + A NP+PG
Sbjct: 180 PPFLLKTLPDYLLGKIQPVPQSG-NATLAPLIRKNMGKLDFTQTAEQVDRHVRAMNPWPG 238
Query: 175 AKTYYISYQNKKKFL--KIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
T+ S KFL +WK + T+ PG I ILV CG V + E+Q
Sbjct: 239 --TFCDSPLGILKFLSGSVWKDES---GKTETPGMIWE-GPKQEILVRCGSGVYCVREIQ 292
Query: 233 KNNKKKISATEFING 247
K K +SA EF+ G
Sbjct: 293 KAGGKAMSAREFLMG 307
>gi|387126150|ref|YP_006294755.1| methionyl-tRNA formyltransferase [Methylophaga sp. JAM1]
gi|386273212|gb|AFI83110.1| Methionyl-tRNA formyltransferase [Methylophaga sp. JAM1]
Length = 310
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT L +KL L +++T+ E ++ PQ + YA I K EA +DWS S
Sbjct: 159 DTGEQLHDKLALLGANTLLETLNNFEVLQSQSM--PQDDAESCYAAKILKKEANIDWSQS 216
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIES-TKKPGTILNVNFHNGI 217
A+ I R+I AFN +P A+T + + K L+IW+A + ++ KPGTI+ + GI
Sbjct: 217 AQQIDRQIRAFNSWPIAQTLW-----QDKMLRIWQAEVIDSQNHAVKPGTIIQAD-RQGI 270
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYF 255
+ G VI+LL LQ KK + +F+N +K YF
Sbjct: 271 DIATGDGVIRLLSLQAPGKKAVPTNDFLNAHSLKAGDYF 309
>gi|261419370|ref|YP_003253052.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y412MC61]
gi|297530653|ref|YP_003671928.1| methionyl-tRNA formyltransferase [Geobacillus sp. C56-T3]
gi|319766185|ref|YP_004131686.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y412MC52]
gi|261375827|gb|ACX78570.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y412MC61]
gi|297253905|gb|ADI27351.1| methionyl-tRNA formyltransferase [Geobacillus sp. C56-T3]
gi|317111051|gb|ADU93543.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y412MC52]
Length = 319
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 124/306 (40%), Gaps = 67/306 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT A IL L + + + ++T+PD GR + PVK A + I ++QP
Sbjct: 4 IVFMGTPDFAVPILRQLLHDGYRVAAVVTQPDKPKGRKREPVPPPVKVEAERRGIPVLQP 63
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y ++ L+ F I + +LPE
Sbjct: 64 TKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGGAPIHY 123
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKLFFK-------- 133
T +T+ +E+L I DT+ + ++ K
Sbjct: 124 AIWQGKTKTGVTIMYMVERLDAGDMLAQVEVPIAETDTVGTLHDKLSAAGAKLLSETLPL 183
Query: 134 ---------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
PQ +YAP I++ + +DW+ + I I AF+P+P ++Y
Sbjct: 184 LLEGNITPVPQDEEKATYAPNIRREQERIDWTQPGEAIYNHIRAFHPWP------VTYTT 237
Query: 185 KKKFL-KIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISAT 242
+ + K+W + + PGTIL + NGI+V G + I++ ELQ KK+++A
Sbjct: 238 QDGHIWKVWWGEKVPAPRSAPPGTILALE-ENGIVVATGNETAIRITELQPAGKKRMAAG 296
Query: 243 EFINGC 248
EF+ G
Sbjct: 297 EFLRGA 302
>gi|424867578|ref|ZP_18291360.1| Methionyl-tRNA formyltransferase [Leptospirillum sp. Group II
'C75']
gi|124516654|gb|EAY58162.1| Methionyl-tRNA formyltransferase [Leptospirillum rubarum]
gi|387221890|gb|EIJ76397.1| Methionyl-tRNA formyltransferase [Leptospirillum sp. Group II
'C75']
Length = 319
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 129/315 (40%), Gaps = 83/315 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++F GT A L+ L + +V + T+PD +GRG L+ SPV++ A I ++
Sbjct: 8 IRVVFMGTPQIAVPFLEALVEKRYAVVGVFTQPDKPAGRGYTLHSSPVRRAAESRGIPVM 67
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
P SLK + ++L + D+++V+ ILP++
Sbjct: 68 TPGSLKTEDDW--------RILREWSPDVIVVVAYGKILPKEMLQLPRFGCLNVHASLLP 119
Query: 100 ------------------TSLTLQNKLEKLSKILIIDTIK-KIEYDMTKLFFK------- 133
+ LTL E + ++D + I D T L
Sbjct: 120 ELRGASPIQWAILKGLAVSGLTLMKMDEGMDTGPVLDQCQIAINPDETSLTLMEKMMDQG 179
Query: 134 -------------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
PQS + APLI+KN LD++ +A+ + R + A NP+PG
Sbjct: 180 PPFLLKTLPDYLLGKIQPVPQSG-NATLAPLIRKNMGKLDFTQTAEQVDRHVRAMNPWPG 238
Query: 175 AKTYYISYQNKKKFL--KIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQ 232
T+ S KFL +WK + T+ PG I ILV CG V + E+Q
Sbjct: 239 --TFCDSPLGILKFLSGSVWKDES---GKTETPGMIWE-GPKQEILVRCGAGVYCVREIQ 292
Query: 233 KNNKKKISATEFING 247
K K +SA EF+ G
Sbjct: 293 KAGGKAMSAREFLMG 307
>gi|224372364|ref|YP_002606736.1| methionyl-tRNA formyltransferase [Nautilia profundicola AmH]
gi|223588793|gb|ACM92529.1| methionyl-tRNA formyltransferase [Nautilia profundicola AmH]
Length = 294
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 137/306 (44%), Gaps = 81/306 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F G+ A ILD L N ++IV + T+PD GR L +PVKKYAL++S+++
Sbjct: 1 MRIVFMGSPDYAVKILDEL-NKRYDIVALYTQPDKPVGRKKVLTPTPVKKYALENSLEVF 59
Query: 61 QPISLK--------------------------------------LNGKYHKIANETHKLL 82
P SL+ L KY + +L
Sbjct: 60 TPSSLRDDEIIAGLKPDFIVVAAYGLLLPEKILNIAPCINLHASLLPKYRGASPIQSAIL 119
Query: 83 NKIEF--------DIMIVMG-ILPED-------TSLTLQNKLEKLSK---ILIIDTIKKI 123
N E+ D+ + G IL D TS+ L N+L ++ +ID KI
Sbjct: 120 NGDEYTGVTAMLMDVGLDTGDILTWDYTEVGRKTSIDLFNELAVIAAKQTPFVIDNFSKI 179
Query: 124 EYDMTKLFFKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
KP Q + SY+P IKK + + + SA I RK AF P+PG Y +
Sbjct: 180 ---------KPLKQIDAFASYSPKIKKQDGYVTFE-SALIIDRKYRAFQPWPG--IYCDA 227
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
+ KI + + +S K G IL +N +G++V C K IKLL++Q KK++ A
Sbjct: 228 F-------KINEMELVDTDSVNKAGEILEIN--DGVVVGCAKGKIKLLKIQVPGKKEVKA 278
Query: 242 TEFING 247
+++NG
Sbjct: 279 IDYVNG 284
>gi|171464331|ref|YP_001798444.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|238692832|sp|B1XSN1.1|FMT_POLNS RecName: Full=Methionyl-tRNA formyltransferase
gi|171193869|gb|ACB44830.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 332
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 14/167 (8%)
Query: 89 IMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKK 148
+++ + I ++TS +L ++L L LI++ + ++ T + PQ+ G +YA I K
Sbjct: 164 LVVELDIARDETSASLHDRLAGLGADLIVNALDVLQQGKT-MIRSPQAIKGITYAEKILK 222
Query: 149 NEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWK---AHALSIESTKKP 205
+EA +DW+LSA+ I ++I AFNPFPGA + Y +K+W A + +
Sbjct: 223 SEAEIDWTLSAQEIDQRIRAFNPFPGASSKLNGYA-----IKLWNSRLADSQAFSMVGGA 277
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNI 252
G +L +G + CG+ V+++LE+QK KK++A CI+ I
Sbjct: 278 GDVLEFG-RDGAYIQCGEGVLEVLEMQKPGGKKMAA----KACIQPI 319
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT AA + ++ + H IVL T+PD +GRGM L SPVK++AL+ +I I+
Sbjct: 1 MKIVFAGTPEFAAQAVRAIHAAGHEIVLAFTQPDRRAGRGMHLQASPVKEFALQKNIPIL 60
Query: 61 QPISLK---LNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP +L+ + + A E +K L+ IEFD M+V+ ILP++
Sbjct: 61 QPETLRRTSADPQKKAQAEEAYKSLSAIEFDAMVVVAYGLILPQE 105
>gi|422379713|ref|ZP_16459899.1| methionyl-tRNA formyltransferase [Escherichia coli MS 57-2]
gi|432734038|ref|ZP_19968862.1| methionyl-tRNA formyltransferase [Escherichia coli KTE45]
gi|432761123|ref|ZP_19995613.1| methionyl-tRNA formyltransferase [Escherichia coli KTE46]
gi|324009053|gb|EGB78272.1| methionyl-tRNA formyltransferase [Escherichia coli MS 57-2]
gi|431271931|gb|ELF63049.1| methionyl-tRNA formyltransferase [Escherichia coli KTE45]
gi|431306430|gb|ELF94743.1| methionyl-tRNA formyltransferase [Escherichia coli KTE46]
Length = 315
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ D+ + G I EDTS TL +KL +L +I T+K++
Sbjct: 130 AGDTETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLAD 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
K + ++ + +YA + K EA +DWSLSA + R I AFNP+P ++ + +
Sbjct: 190 GTAKPEVQDETLV--TYAEKLSKEEARIDWSLSAAQLERCIRAFNPWP---MSWLEIEGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+WKA + + PGTIL N GI V G ++ LL +Q KK +S + +
Sbjct: 245 P--VKVWKASVIDTTTKAAPGTILEAN-KQGIQVATGDGILNLLSMQPAGKKAMSVQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|34499719|ref|NP_903934.1| methionyl-tRNA formyltransferase [Chromobacterium violaceum ATCC
12472]
gi|39931209|sp|Q7NQ76.1|FMT_CHRVO RecName: Full=Methionyl-tRNA formyltransferase
gi|34105570|gb|AAQ61924.1| methionyl-tRNA formyltransferase [Chromobacterium violaceum ATCC
12472]
Length = 307
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L L + H I L+LT+PD +GRGMKL SPVK+ AL H +++
Sbjct: 1 MKLIFAGTPEFAAAALRELIAAGHEIALVLTQPDRPAGRGMKLKPSPVKEVALAHGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L I+ D+M+V ILP+D
Sbjct: 61 QPEKLRGN-------QEAQQMLRDIQADVMVVAAYGLILPQD 95
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I ++T+ TL +KL I++T+ +++ ++ + Q G +YA + K EA +D
Sbjct: 156 IAADETAATLHDKLAACGAQAIVETLGRLD----RIVPRKQPEDGVTYAQKLSKAEAEVD 211
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+L A+ + R I A+NP PGA T Q + LK+W A A + +PG +++ +
Sbjct: 212 WALPAEQVARAIRAYNPAPGAFT-----QLGGEPLKLWMASAEP--GSAEPGAVVSADA- 263
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G+LV G+ ++++ LQ K+++A +F+ G
Sbjct: 264 DGVLVGAGQGLVRVSVLQAAGGKRLAARDFVAG 296
>gi|347759147|ref|YP_004866709.1| methionyl-tRNA formyltransferase [Micavibrio aeruginosavorus
ARL-13]
gi|347591665|gb|AEP10707.1| methionyl-tRNA formyltransferase [Micavibrio aeruginosavorus
ARL-13]
Length = 318
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 127/326 (38%), Gaps = 83/326 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++F GT + L + NS H ++ + ++P GRG ++ SPV AL I +
Sbjct: 7 LKVVFMGTPDFSVPALKAILNSHHKVIAVYSQPPRPKGRGQQVQPSPVHAAALDAGIPVY 66
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
P+SLK + + + D+ +V ILP D
Sbjct: 67 NPLSLKKD-------DAARAQFKALGADVAVVAAYGLILPRDVLDAPKYGCINIHASLLP 119
Query: 100 ------------------TSLTLQNKLEKLSKILII-----------------DTIKKIE 124
T +++ E L +I D + +
Sbjct: 120 RWRGASPIQRAIWAGDDATGISIMQMGEGLDTGPVIAMRDMKLNGTTTTPQLHDALSAMG 179
Query: 125 YDM-----------TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
DM ++ PQ + +YAP++KK++ +DW+ +A I ++I A NP+P
Sbjct: 180 ADMIVPVLDRLAIDGRIDVTPQDDAQSTYAPMLKKDDGRVDWTKTAAEIDQQIRALNPWP 239
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQ 232
G T + +KI A + S + GT+++ + V CG V++L+++
Sbjct: 240 GVWT----SNGDARRIKIVHAQLEDMRSHESAGTLMDRDGR----VACGDGRVLRLMQVH 291
Query: 233 KNNKKKISATEFINGCIKNIKYFISV 258
N K + + ING I NI +
Sbjct: 292 PENSKVMDSFAAINGGILNIGTVLGA 317
>gi|319764923|ref|YP_004128860.1| methionyl-tRNA formyltransferase [Alicycliphilus denitrificans BC]
gi|317119484|gb|ADV01973.1| methionyl-tRNA formyltransferase [Alicycliphilus denitrificans BC]
Length = 351
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 82 LNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGES 141
L+ + +M I P DT+ TL ++L ++ LI+ ++ K PQ G S
Sbjct: 178 LDTGDMLLMEKTAIAPLDTTATLHDRLAQIGGRLIVLALELAVRGGLKA--TPQPAEGVS 235
Query: 142 YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIES 201
YA I+K E+ +DWSL A+ I R++ AF+PFPGA T +K+W S +
Sbjct: 236 YAHKIEKAESQIDWSLPAEAIARRVRAFDPFPGAATRL-----GADAIKVWSCEIDSCQR 290
Query: 202 -TKKP-GTILNVNFHNGILVVCGK-NVIKLLELQKNNKKKISATEFING 247
KP G IL+++ GI V CG +V++L LQ+ K++ A +F+ G
Sbjct: 291 FPDKPCGHILHID-DAGIAVACGAGSVLRLTVLQRAGGKRLQAADFLRG 338
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL+H +
Sbjct: 1 MKVIFAGTPEFARVALEHLLAAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALEHGTAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY + A + + D M+V ILP+
Sbjct: 61 QPRSLRLDGKYPEDAAAARAAIEATQADAMVVAAYGLILPQ 101
>gi|432794499|ref|ZP_20028580.1| methionyl-tRNA formyltransferase [Escherichia coli KTE78]
gi|432796015|ref|ZP_20030055.1| methionyl-tRNA formyltransferase [Escherichia coli KTE79]
gi|431336983|gb|ELG24077.1| methionyl-tRNA formyltransferase [Escherichia coli KTE78]
gi|431349236|gb|ELG36077.1| methionyl-tRNA formyltransferase [Escherichia coli KTE79]
Length = 315
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDTS L +KL +L +I T+K++ K + ++ + +YA + K EA +DWSL
Sbjct: 162 EDTSGMLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARIDWSL 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA + R I AFNP+P ++ + + +K+WKA + + PGTIL N GI
Sbjct: 220 SAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAAPGTILEAN-KQGI 273
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V G ++ LL LQ KK +SA + +N
Sbjct: 274 QVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|449472091|ref|XP_004153494.1| PREDICTED: methionyl-tRNA formyltransferase-like [Cucumis sativus]
Length = 268
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL L +I+T++++ + + ++ + +YA + K EA +D
Sbjct: 112 ITAEDTSATLYDKLADLGPQGLIETLQQLADNTATPEVQDEAQV--TYAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ ++ +K+WKA ++ ++ +PGTI++ +
Sbjct: 170 WSLSAAQLERCIRAFNPWP------MSWLMIDEQPVKVWKASVINGNASAEPGTIIDAS- 222
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
NGI V G+ ++ L LQ KK +SA + +N ++FI
Sbjct: 223 KNGIQVATGEGILNLESLQPAGKKAMSAQDLLN---SRREWFI 262
>gi|352516236|ref|YP_004885553.1| methionyl-tRNA formyltransferase [Tetragenococcus halophilus NBRC
12172]
gi|348600343|dbj|BAK93389.1| methionyl-tRNA formyltransferase [Tetragenococcus halophilus NBRC
12172]
Length = 317
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL+ L + + ++ ++T+PD GR K+ SPVK+ AL I I+Q
Sbjct: 3 KIVFMGTPEFSVPILEGLVTAGYEVLAVVTQPDRPVGRKKKIIASPVKEKALALGISILQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + +IA ++ F + +L P+ +L + L
Sbjct: 63 PEKISGSKEMEEIARLQPDVIVTAAFGQFLPEKLLQIPQYGALNVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------P 134
E + + I+D +KK++ D+ +F K P
Sbjct: 123 YAIINGEHKTGVSIMDMVKKMDAGGVYAQESIPITSSDDVGTMFTKLSLLGRDLLLEVLP 182
Query: 135 QSNIGE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
Q G ++AP IK E +DW +A I +K+ P+P A Y +YQ
Sbjct: 183 QILDGTLHSVAQDEKQVTFAPNIKPEEEAIDWQQTATEIDQKVRGMRPWPIA---YTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
+ KIWK + + +KP TI+ N + + CG+ V+ + ELQ + K
Sbjct: 240 ENR--WKIWKVSPVEERTNEKPATIVR-NEKAQLWIACGQQTVLAIEELQPAGRSKQKIA 296
Query: 243 EFINGCIKNI 252
F+NG KNI
Sbjct: 297 NFLNGAGKNI 306
>gi|423199140|ref|ZP_17185723.1| methionyl-tRNA formyltransferase [Aeromonas hydrophila SSU]
gi|404629494|gb|EKB26241.1| methionyl-tRNA formyltransferase [Aeromonas hydrophila SSU]
Length = 314
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I ++TS +L +KL +L ++DTI + T + Q + +YA + K EA +D
Sbjct: 158 IAADETSASLYDKLAELGPQALVDTIDAMAAGDTA--AEAQDDALANYAEKLSKEEARID 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WS+ A I R I AFNP+P IS+ + + +K+W+A ++ + ++ GT+L +
Sbjct: 216 WSMDAAAIERCIRAFNPWP------ISWFEVADQTVKVWQAEVITQDHGQRAGTLLKAD- 268
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V GK V++LL LQ KK +S T+ +N
Sbjct: 269 KQGIDVATGKGVLRLLTLQPPGKKAMSVTDLLN 301
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IF+GT AA L L +S+H +V + T+PD +GRG KL SPVK+ AL H + +
Sbjct: 4 LKLIFSGTPDFAARHLAALLSSDHEVVAVYTQPDKPAGRGQKLTASPVKELALAHDLPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPASLR--------KEEAQAELAALGADLMVVVAYGLILP 95
>gi|315646178|ref|ZP_07899298.1| methionyl-tRNA formyltransferase [Paenibacillus vortex V453]
gi|315278377|gb|EFU41693.1| methionyl-tRNA formyltransferase [Paenibacillus vortex V453]
Length = 313
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 68/310 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L+ L ++I ++T+PD GR L +PVK+ AL+H I ++
Sbjct: 1 MKIVFMGTPAFAVPSLEMLIVEGYSIAAVVTQPDRPQGRKKVLTPTPVKEAALRHGIPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL---------- 108
QP L+ ++A L+ + ++ +L P L + L
Sbjct: 61 QPQRLRSPEAVAELAEYKPDLIVTAAYGQILPKSVLDMPSLGCLNVHGSLLPAYRGGAPI 120
Query: 109 -------EKLSKILII---------DTIKKIEY-----DMTKLFFKPQSNIG-------- 139
E ++ I ++ D I K E D F+ S G
Sbjct: 121 QRSIINGEAVTGITLMYMAEGLDTGDMIAKAEVPIEETDTAGTMFEKLSQAGAKLLQQEL 180
Query: 140 -----------------ESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+YAP + +++ +DWS S++ I +I P+ G T +
Sbjct: 181 PRLVKGKVDAEPQDEAKATYAPNLTRDDEKIDWSRSSREIYNQIRGLVPYSGGFTLW--- 237
Query: 183 QNKKKFLKIWKA----HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
N + F K+W A A + S +PGT+L ++ GI+V G + LL +Q + KK
Sbjct: 238 -NGEVF-KVWAAANPSSAQVVSSEAQPGTVLGLH-EEGIVVKTGDGSLTLLTVQPSGKKA 294
Query: 239 ISATEFINGC 248
+ A +F+ G
Sbjct: 295 MDAAQFVRGT 304
>gi|225574497|ref|ZP_03783107.1| hypothetical protein RUMHYD_02574 [Blautia hydrogenotrophica DSM
10507]
gi|225038284|gb|EEG48530.1| methionyl-tRNA formyltransferase [Blautia hydrogenotrophica DSM
10507]
Length = 319
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 7/157 (4%)
Query: 92 VMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEA 151
V+ + P++T +L +KL ++ L+++T+++++ +P+ + +YA +I K
Sbjct: 157 VVSLDPKETGGSLFDKLSQVGAKLLVETLEQVKNGQAVYERQPEQSP-TAYASMIDKKMG 215
Query: 152 VLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNV 211
+DW++ A I R I +P+P A T+ + K LKIW A + E+T +PG I +
Sbjct: 216 NIDWTMPAVKIERLIRGLSPWPSAYTFL-----EGKTLKIWAARVVQEETTARPGEIFHT 270
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+ GI V G+ V+ L E+Q K++++A +F+ GC
Sbjct: 271 D-KRGIYVAAGEGVLCLDEVQLEGKRRMAAADFLRGC 306
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT A L+ L ++H ++ ++T+PD GRG L +PVK+ AL+H + +
Sbjct: 6 MRVIFMGTPDFAVGTLNALVEADHEVLAVVTQPDKPRGRGKNLCCTPVKEEALRHGLAVC 65
Query: 61 QP 62
QP
Sbjct: 66 QP 67
>gi|394993911|ref|ZP_10386650.1| methionyl-tRNA formyltransferase [Bacillus sp. 916]
gi|393805235|gb|EJD66615.1| methionyl-tRNA formyltransferase [Bacillus sp. 916]
Length = 317
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 69/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK A +H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLFFKPQ 135
T +T+ +EKL +I I ++E D T KL +
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSIAGAKLLSETV 181
Query: 136 SNI-------------GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
N+ +YAP IK+ + +DW+ + I +I NP+P A T ++
Sbjct: 182 PNVISGNINPIKQDESKATYAPNIKREQERIDWAKPGEQIYNQIRGLNPWPVAYT-TLNG 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISA 241
QN +K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++
Sbjct: 241 QN----MKVWASEKVAAKTEAAPGTVIRTE-QNGIVVASGNSTALLITELQPAGKKRMKG 295
Query: 242 TEFINGCIKNIK 253
+F+ G KN++
Sbjct: 296 EDFVRG--KNVQ 305
>gi|334134786|ref|ZP_08508288.1| methionyl-tRNA formyltransferase [Paenibacillus sp. HGF7]
gi|333607630|gb|EGL18942.1| methionyl-tRNA formyltransferase [Paenibacillus sp. HGF7]
Length = 323
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 122/318 (38%), Gaps = 77/318 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IF GT A L TL + + ++T PD GR L PVK A KH I +
Sbjct: 1 MKLIFMGTPDFAVPSLRTLIEGGYEVTAVVTPPDRPKGRKRVLTPPPVKVEAEKHGIPVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL---------- 108
QP L+ + +I L+ + ++ +L P + + L
Sbjct: 61 QPEKLRTSDTVDEIRRIAPDLIVTAAYGQILPKAVLDIPRLGCINIHASLLPKYRGGAPI 120
Query: 109 -------EKLSKILII---------DTIKKIEY-----DMTKLFFK-------------- 133
E+++ + I+ D I KIE D T F
Sbjct: 121 HHAIIQGEQVTGVTIMYMAVGLDTGDMISKIEVPIGDDDTTGTMFDKLSLAGADLLKRTL 180
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
PQ + Y+P I + + +DW+ S+K I + NPFPGA T +
Sbjct: 181 PELIAGTVQAVPQDDSQAVYSPNINREDEKIDWNRSSKDIWNLVRGLNPFPGAYTTW--- 237
Query: 183 QNKKKFLKIW----------KAHALSIESTK---KPGTILNVNFHNGILVVCGKNVIKLL 229
+ LK+W A S ST KPGT++ + +GI V G +KLL
Sbjct: 238 --NGEILKVWVCKKPEDLAPSADRTSESSTGAGLKPGTVIGAD-EDGIEVATGDGSLKLL 294
Query: 230 ELQKNNKKKISATEFING 247
+Q KK + A + + G
Sbjct: 295 NVQPAGKKAMEAAQLVRG 312
>gi|427392426|ref|ZP_18886431.1| methionyl-tRNA formyltransferase [Alloiococcus otitis ATCC 51267]
gi|425731387|gb|EKU94205.1| methionyl-tRNA formyltransferase [Alloiococcus otitis ATCC 51267]
Length = 318
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 66/307 (21%)
Query: 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++F GT A IL+ L +E +V ++T+PD GR K+ PVK+ A +I ++
Sbjct: 3 RVVFMGTPQFAVPILEGLLANESLEVVAVVTQPDRKVGRKGKITPPPVKRLAQDQAIPVL 62
Query: 61 QPISLKLNGKYH---KIANE-----------THKLLNKIEF-DIMIVMGILP-------- 97
QP LK + + K+A + ++L+ +F I + +LP
Sbjct: 63 QPERLKGSDQEKDLLKLAPDLIVTAAFGQYLPQEILDLPKFASINVHASLLPRYRGAAPI 122
Query: 98 --------EDTSLTLQNKLEKLSKILIIDTIK-KI-EYDMTKLFFKPQSNIGE------- 140
++T +T+ + +++ II K KI D T + F+ S +G
Sbjct: 123 HYALWNGDQETGVTIMHMTQEIDAGNIISQAKLKIGPEDDTGILFEKLSYLGRDLLEDTL 182
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+YAP+I +N+ + W A+ + KI AF PFPG T++
Sbjct: 183 VKIFKGEGQGVKQDPSQVTYAPMISRNQEEISWQEPAQDLYNKIRAFRPFPGTYTWF--- 239
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISA 241
+ KIW +H + ++ KKPG I+ + +LV CG + ++ L ++Q K ++
Sbjct: 240 --EGDRFKIWDSHLVDQKTDKKPGQIVEAS-KKQLLVACGDQTILALDQVQPAGKSQMPV 296
Query: 242 TEFINGC 248
++ G
Sbjct: 297 KSYLAGA 303
>gi|33565036|emb|CAE39985.1| methionyl-tRNA formyltransferase [Bordetella parapertussis]
Length = 287
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+ T+ L ++L I+D + + L + Q + G +YA + K EA LD SL
Sbjct: 141 QQTAAQLHDELALAGGQAIVDALAAL--GQGGLAPRRQPDAGVTYAAKLDKAEAALDCSL 198
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP PGA + +K+W+A AL + PG +L + GI
Sbjct: 199 PAAVLARRVRAFNPVPGATIRLPGLDDP---VKVWRAQALEQAAGGPPGAVLRADAQ-GI 254
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G+ V++LLELQK K+ F+ G
Sbjct: 255 DIATGQGVLRLLELQKAGGKRQPVDVFVRG 284
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 28 LILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEF 87
L+LT+PD +GRG+KL SPVK+ AL I + QP SL+L+G+Y A L ++
Sbjct: 3 LVLTQPDRPAGRGLKLTPSPVKQAALAAGIGVAQPRSLRLDGRYPDEAAAARAQLERVAP 62
Query: 88 DIMIVMG---ILPE 98
D+M+V ILP+
Sbjct: 63 DVMVVAAYGLILPQ 76
>gi|29655280|ref|NP_820972.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 493]
gi|154706101|ref|YP_001425401.1| methionyl-tRNA formyltransferase [Coxiella burnetii Dugway
5J108-111]
gi|161831370|ref|YP_001595981.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 331]
gi|212213456|ref|YP_002304392.1| methionyl-tRNA formyltransferase [Coxiella burnetii CbuG_Q212]
gi|33516855|sp|Q83AA8.1|FMT_COXBU RecName: Full=Methionyl-tRNA formyltransferase
gi|189044506|sp|A9KH14.1|FMT_COXBN RecName: Full=Methionyl-tRNA formyltransferase
gi|189044507|sp|A9N9H5.1|FMT_COXBR RecName: Full=Methionyl-tRNA formyltransferase
gi|238065948|sp|B6J3C2.1|FMT_COXB2 RecName: Full=Methionyl-tRNA formyltransferase
gi|29542552|gb|AAO91486.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 493]
gi|154355387|gb|ABS76849.1| methionyl-tRNA formyltransferase [Coxiella burnetii Dugway
5J108-111]
gi|161763237|gb|ABX78879.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 331]
gi|212011866|gb|ACJ19247.1| methionyl-tRNA formyltransferase [Coxiella burnetii CbuG_Q212]
Length = 314
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ L ++L + L+++++ K+E KL + Q +YA I+K EA++DW
Sbjct: 160 EDTAADLHDRLSLIGADLLLESLAKLEKGDIKL--EKQDEASATYASKIQKQEALIDWRK 217
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA I R++ AFNP P A TY+ + + ++IW+A + ++ +PG +++ + GI
Sbjct: 218 SAVEIARQVRAFNPTPIAFTYF-----EGQPMRIWRATVVDEKTDFEPGVLVDAD-KKGI 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ G +++L +LQ K+ SA +FIN
Sbjct: 272 SIAAGSGILRLHQLQLPGKRVCSAGDFIN 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT A L L +S H ++ + T+PD SGRG K+ SPVK+ A ++ I II
Sbjct: 3 LKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPII 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ + K L + D+M+V+ ILP
Sbjct: 63 QPFSLRDEVEQEK--------LIAMNADVMVVVAYGLILP 94
>gi|402815958|ref|ZP_10865550.1| methionyl-tRNA formyltransferase Fmt [Paenibacillus alvei DSM 29]
gi|402506998|gb|EJW17521.1| methionyl-tRNA formyltransferase Fmt [Paenibacillus alvei DSM 29]
Length = 316
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 126/310 (40%), Gaps = 70/310 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT A L+ L + + ++T+PD GR L +PVK AL+H I + Q
Sbjct: 3 KIVFMGTPEFAVPCLENLLKEGYEVAAVVTQPDRPVGRKRILTPTPVKAAALEHGITVWQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P L+ + I L+ + ++ +L P + + L
Sbjct: 63 PEKLRTSTTIEDIRALEPDLIVTAAYGQILPKSVLEIPRLGCINVHGSLLPKYRGGAPIQ 122
Query: 109 ------EKLSKILII---------DTIKKIEYDMTK------LFFK-------------- 133
E ++ + I+ D I+ IE +T +F K
Sbjct: 123 RSIMNGESVTGVTIMYMAEGMDTGDMIRPIEVPITDEDNAGTMFQKLSAAGAQLLIDTLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ + +YAP +K+ + +DWS SA+ I ++ PF G T +
Sbjct: 183 DLIAGRIQAVPQPHEEATYAPNLKREDEKIDWSRSARDIFNQVRGLVPFSGGFTLW---- 238
Query: 184 NKKKFLKIWKAHALSIESTK------KPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
N + F K+W A S+ +PGT+L ++ GI V G + L E+Q KK
Sbjct: 239 NDEVF-KVWACEAPSMSEAAVSKGVHEPGTVLTLS-PRGIEVQAGAGTLWLTEVQPAGKK 296
Query: 238 KISATEFING 247
++A+EF+ G
Sbjct: 297 AMAASEFVRG 306
>gi|170682749|ref|YP_001745550.1| methionyl-tRNA formyltransferase [Escherichia coli SMS-3-5]
gi|226704299|sp|B1LGP4.1|FMT_ECOSM RecName: Full=Methionyl-tRNA formyltransferase
gi|170520467|gb|ACB18645.1| methionyl-tRNA formyltransferase [Escherichia coli SMS-3-5]
Length = 315
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL +
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTVTKSAPGTILEAS-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|345301135|ref|YP_004830493.1| methionyl-tRNA formyltransferase [Enterobacter asburiae LF7a]
gi|345095072|gb|AEN66708.1| Methionyl-tRNA formyltransferase [Enterobacter asburiae LF7a]
Length = 315
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I+T++++ + + + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSSTLYDKLAELGPQGLIETLQQLADNTAQPEGQDEALV--TYAEKLSKEEAQID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ ++ +K+WKA + S+ +PGTIL+ N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWVMIDDQP--VKVWKASVIEGHSSAEPGTILDAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V + ++ L LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATAEGILNLESLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAGRGKKLMPSPVKVLAEEHGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ +E +L+ + D+M+V+ ILP
Sbjct: 65 QPASLR--------PHENQQLVADLNADVMVVVAYGLILP 96
>gi|206603586|gb|EDZ40066.1| Methionyl-tRNA formyltransferase [Leptospirillum sp. Group II
'5-way CG']
Length = 319
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 135/314 (42%), Gaps = 81/314 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++F GT A L+ L + +V + T+PD +GRG L+ SPV++ A I ++
Sbjct: 8 IRVVFMGTPQIAVPFLEALVEKNYPVVGVFTQPDKPAGRGYTLHSSPVRRSAESRGIPVM 67
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
P SLK H+ + ++L + D+++V+ ILP++
Sbjct: 68 TPGSLK-----HE---DDWRILREWSPDVIVVVAYGKILPKEMLQLPRFGCLNVHASLLP 119
Query: 100 ------------------TSLTLQNKLEKLSKILIIDTIK-KIEYDMTKLFF-------- 132
+ LTL E + ++D + IE + T L
Sbjct: 120 ELRGASPIQWAILKGLAVSGLTLMKMDEGMDTGPVLDQCQIAIEPNETSLTLMEKMMDQG 179
Query: 133 ----------------KPQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGA 175
+P + G++ APLI+KN LD+S +A+ + R + A NP+PG
Sbjct: 180 PPFLLKTLPEYLLGKIQPVAQSGDATLAPLIRKNMGKLDFSQTAEQVDRHVRAMNPWPG- 238
Query: 176 KTYYISYQNKKKFL--KIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
T+ S KFL IW+ ++ + + PG I ILV CG V + E+QK
Sbjct: 239 -TFCDSPLGILKFLSGSIWEDNSGKVAT---PGMIWE-GPKQEILVRCGSGVYCVREIQK 293
Query: 234 NNKKKISATEFING 247
K +SA EF+ G
Sbjct: 294 AGGKAMSAREFLKG 307
>gi|85713818|ref|ZP_01044808.1| methionyl-tRNA formyltransferase [Nitrobacter sp. Nb-311A]
gi|85699722|gb|EAQ37589.1| methionyl-tRNA formyltransferase [Nitrobacter sp. Nb-311A]
Length = 310
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 126/310 (40%), Gaps = 75/310 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IF GT A L L H I + T+ +GRGMKL +PV + A + I ++
Sbjct: 3 LRLIFMGTPDFAVPTLLQLVAHGHEIAAVYTREARAAGRGMKLRPTPVAREAQRLGIPVL 62
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNK------- 84
P +LK L+ + N LL +
Sbjct: 63 TPKTLKTPEALLEFQSFAADAAVVVAYGMILPQAILDAPRYGCYNLHASLLPRWRGAAPI 122
Query: 85 --------IEFDIMIV---MGILPEDTSLT-------------LQNKLEKLSKILII--- 117
E +M++ G+ D +LT L + L L L++
Sbjct: 123 NRAIMTGDAESGVMVMKMDAGLDTGDVALTSGLPVTDAMTASDLHDALAPLGADLMVRAM 182
Query: 118 DTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
D + + E +T+ QS G +YA I K EA +DW+ A ++R I+ +PFPGA
Sbjct: 183 DALSRGELPLTR-----QSEQGVTYAAKIDKAEARIDWNRPACEVLRHIHGLSPFPGAWC 237
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
+ + +KI + + PG +L+ + + + CG+ I++LELQ+ K
Sbjct: 238 -EMPVDGEPTRVKILRCEV--ADGAGSPGDLLD----DRLTIACGEGAIRVLELQRAGKP 290
Query: 238 KISATEFING 247
+ A F+NG
Sbjct: 291 PMKARAFLNG 300
>gi|345304384|ref|YP_004826286.1| methionyl-tRNA formyltransferase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113617|gb|AEN74449.1| Methionyl-tRNA formyltransferase [Rhodothermus marinus
SG0.5JP17-172]
Length = 320
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 71/307 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRG------------MKLNFSP- 47
++I+F GT A L+ L + + V ++T PD GRG ++L SP
Sbjct: 15 LRIVFMGTPEFAVPSLERLVEAGYRPVAVVTGPDRPRGRGQRVQPTPVKEAALRLGLSPI 74
Query: 48 -----VKKYALKHSIKIIQP-------------------------ISLKLNGKY------ 71
V+ A +I ++P + L +Y
Sbjct: 75 LQPESVRDPAFARAIAELRPDVIVVVAFKILPPEVYTQARLGAFNLHASLLPRYRGAAPI 134
Query: 72 HK--IANETHKLLN----KIEFDIMIVM-----GILPEDTSLTLQNKLEKLSKILIIDTI 120
H+ +A ET + + E D ++ I PE+T+ L ++L L +++T+
Sbjct: 135 HRAIMAGETETGVTTFFLRPEVDTGEIILQKRTPIGPEETAGELHDRLMHLGAEAVLETV 194
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ IE + +PQ + + AP + + EA + W A+ + I +P PGA T +
Sbjct: 195 RLIERG--EAHPRPQDDGQATLAPKLTREEARVPWDRPARVVHNHIRGLSPHPGAWTMH- 251
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ LK++++ E PGT+L + ++V CG+ ++LLELQ+ ++ +
Sbjct: 252 ----GDRLLKLYRSRL--AEGEGPPGTVLEAD--ERLVVACGEGAVELLELQQEGRRVLP 303
Query: 241 ATEFING 247
A F+ G
Sbjct: 304 ADAFLRG 310
>gi|432890733|ref|ZP_20103588.1| methionyl-tRNA formyltransferase [Escherichia coli KTE165]
gi|431431027|gb|ELH12805.1| methionyl-tRNA formyltransferase [Escherichia coli KTE165]
Length = 315
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL +
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTVTKSAPGTILEAS-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|268318094|ref|YP_003291813.1| methionyl-tRNA formyltransferase [Rhodothermus marinus DSM 4252]
gi|262335628|gb|ACY49425.1| methionyl-tRNA formyltransferase [Rhodothermus marinus DSM 4252]
Length = 320
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 71/307 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRG------------MKLNFSP- 47
++I+F GT A L+ L + + V ++T PD GRG ++L SP
Sbjct: 15 LRIVFMGTPEFAVPSLERLVEAGYRPVAVVTGPDRPRGRGQRVQPTPVKEAALRLGLSPI 74
Query: 48 -----VKKYALKHSIKIIQP-------------------------ISLKLNGKY------ 71
V+ A +I ++P + L +Y
Sbjct: 75 LQPESVRDPAFAEAIAELRPDVIVVVAFKILPPEVYTQARLGAFNLHASLLPRYRGAAPI 134
Query: 72 HK--IANETHKLLN----KIEFDIMIVM-----GILPEDTSLTLQNKLEKLSKILIIDTI 120
H+ +A ET + + E D ++ I PE+T+ L ++L L +++T+
Sbjct: 135 HRAIMAGETETGVTTFFLRPEVDTGEIILQKRTPIGPEETAGELHDRLMHLGAEAVLETV 194
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ IE + +PQ + + AP + + EA + W A+ + I +P PGA T +
Sbjct: 195 RLIERG--EAHPRPQDDTQATLAPKLTREEARVPWDRPAQVVHNHIRGLSPHPGAWTMH- 251
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ LK++++ E PGT+L + + ++V CG+ +++LELQ+ ++ +
Sbjct: 252 ----GDRLLKLYRSRL--AEGEGPPGTVLEAD--DRLVVACGEGAVEILELQQEGRRVLP 303
Query: 241 ATEFING 247
A F+ G
Sbjct: 304 ADAFLRG 310
>gi|339009261|ref|ZP_08641833.1| methionyl-tRNA formyltransferase [Brevibacillus laterosporus LMG
15441]
gi|338773739|gb|EGP33270.1| methionyl-tRNA formyltransferase [Brevibacillus laterosporus LMG
15441]
Length = 317
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 74/315 (23%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT A L+ L + +V ++T+PD GR L PVK+ AL+H + + Q
Sbjct: 5 RILFMGTPDFATQSLEALITNGFQVVGVVTQPDRPVGRKRVLTPPPVKELALRHGLPVYQ 64
Query: 62 -------------------------------PISLKLNGKYHKIANETHKLLNK------ 84
P+SL L H N LL K
Sbjct: 65 PEKIRESEAVQSVLDATRPDLIVTAAYGQILPVSL-LEAPKHGCINIHASLLPKYRGGAP 123
Query: 85 ----------------------IEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDT 119
++ MI I+P DT+ ++ KL L+I+T
Sbjct: 124 IHASIINGEKETGVTIMYMVQALDAGDMISKVIVPIEERDTAASMFEKLATAGADLLIET 183
Query: 120 IKKI-EYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+ K+ + ++T +PQ++ ++AP IK+ LDW+ SA+ I ++ N +P A T
Sbjct: 184 LPKLLKGEITP---EPQNHEEATFAPNIKRENERLDWNKSAREIYNQVRGMNSWPVAFTT 240
Query: 179 YISYQNKKKFLKIWKAHALSIEST-KKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
+ + K K+W A + + PGTI+ +G+++ CG I L E+Q KK
Sbjct: 241 F-----EGKVWKVWWAEVVELAGQLATPGTIIG-RTEDGLIIACGAGSIILKEIQPEGKK 294
Query: 238 KISATEFINGCIKNI 252
++S +F+ G +I
Sbjct: 295 RMSVYDFLRGAGASI 309
>gi|319945036|ref|ZP_08019298.1| methionyl-tRNA formyltransferase [Lautropia mirabilis ATCC 51599]
gi|319741606|gb|EFV94031.1| methionyl-tRNA formyltransferase [Lautropia mirabilis ATCC 51599]
Length = 376
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 89/159 (55%), Gaps = 8/159 (5%)
Query: 92 VMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEA 151
V+ IL DT+ TL ++L + I+ + E +L F+PQ+ G +YA + K E
Sbjct: 209 VVPILETDTASTLHDRLADVGAQAIVAALD--ELSAGRLVFEPQAQAGVTYAAKVDKKEL 266
Query: 152 VLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE--STKKPGTIL 209
+DW+ SA + R I AF+P PGA T+ ++++ L+++++ L + +T PGTI+
Sbjct: 267 GIDWARSAVEVSRHIRAFDP-PGAITWLEGHRDEPP-LRVFQSQVLRNDGNATDAPGTIV 324
Query: 210 NVNFHNGILVVCGK-NVIKLLELQKNNKKKISATEFING 247
+G+ V CG+ ++++L LQ+ ++ A F+ G
Sbjct: 325 AAG-PDGVDVACGQGSIVRLAALQRAGGRRQPADAFLRG 362
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++++AGT + AA LD L S H +V +L++PD +GRG KL S VK+ AL ++ ++
Sbjct: 36 LRVVYAGTPVFAAQALDALIGSRHEVVAVLSQPDRPAGRGQKLLPSAVKQRALAANLPVL 95
Query: 61 QPISLKLN 68
QP SL++
Sbjct: 96 QPESLRIR 103
>gi|359446418|ref|ZP_09236095.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. BSi20439]
gi|358039757|dbj|GAA72344.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. BSi20439]
Length = 317
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 12/150 (8%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKI-EYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+TS +L KL +L +I+TI ++ + D+T +PQ++ +YA + K+EA +DWS+
Sbjct: 163 ETSASLYAKLAELGPDALINTINRLAKGDITP---EPQNDADANYAKKLSKDEANIDWSM 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A+ I R I AFNP+P T Q +KI++A+ +E + GT+L + NGI
Sbjct: 220 DAEQIERNIRAFNPWPVCFT-----QMSGNTVKIYQANV--VEQSGAAGTVLTSD-KNGI 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CGK+ + + ELQ KK ++ +F+NG
Sbjct: 272 VVACGKHALSISELQPQGKKPMAINDFLNG 301
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L NSEH IV + ++PD +GRG KL S VK AL+H + +
Sbjct: 5 LRIIFAGTPDFAARHLQALINSEHQIVGVYSQPDRPAGRGKKLKASEVKALALEHDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK +E + LN + DIMIV+ ILP
Sbjct: 65 QPQSLK--------TDEALEELNSLNADIMIVVAYGLILP 96
>gi|91212714|ref|YP_542700.1| methionyl-tRNA formyltransferase [Escherichia coli UTI89]
gi|117625570|ref|YP_858893.1| methionyl-tRNA formyltransferase [Escherichia coli APEC O1]
gi|218560349|ref|YP_002393262.1| methionyl-tRNA formyltransferase [Escherichia coli S88]
gi|218691574|ref|YP_002399786.1| methionyl-tRNA formyltransferase [Escherichia coli ED1a]
gi|222157991|ref|YP_002558130.1| Methionyl-tRNA formyltransferase [Escherichia coli LF82]
gi|237703017|ref|ZP_04533498.1| methionyl-tRNA formyltransferase [Escherichia sp. 3_2_53FAA]
gi|306816370|ref|ZP_07450508.1| methionyl-tRNA formyltransferase [Escherichia coli NC101]
gi|386601306|ref|YP_006102812.1| methionyl-tRNA formyltransferase [Escherichia coli IHE3034]
gi|386605838|ref|YP_006112138.1| methionyl-tRNA formyltransferase [Escherichia coli UM146]
gi|386620895|ref|YP_006140475.1| Methionyl-tRNA formyltransferase [Escherichia coli NA114]
gi|387618577|ref|YP_006121599.1| methionyl-tRNA formyltransferase [Escherichia coli O83:H1 str. NRG
857C]
gi|387831165|ref|YP_003351102.1| methionyl-tRNA formyltransferase [Escherichia coli SE15]
gi|417087032|ref|ZP_11954079.1| methionyl-tRNA formyltransferase [Escherichia coli cloneA_i1]
gi|419702114|ref|ZP_14229710.1| methionyl-tRNA formyltransferase [Escherichia coli SCI-07]
gi|419912483|ref|ZP_14430937.1| methionyl-tRNA formyltransferase [Escherichia coli KD1]
gi|419944198|ref|ZP_14460707.1| methionyl-tRNA formyltransferase [Escherichia coli HM605]
gi|422361613|ref|ZP_16442230.1| methionyl-tRNA formyltransferase [Escherichia coli MS 110-3]
gi|422751128|ref|ZP_16805037.1| methionyl-tRNA formyltransferase [Escherichia coli H252]
gi|422757059|ref|ZP_16810881.1| methionyl-tRNA formyltransferase [Escherichia coli H263]
gi|422841296|ref|ZP_16889265.1| methionyl-tRNA formyltransferase [Escherichia coli H397]
gi|432359735|ref|ZP_19602948.1| methionyl-tRNA formyltransferase [Escherichia coli KTE4]
gi|432364533|ref|ZP_19607688.1| methionyl-tRNA formyltransferase [Escherichia coli KTE5]
gi|432383187|ref|ZP_19626112.1| methionyl-tRNA formyltransferase [Escherichia coli KTE15]
gi|432389041|ref|ZP_19631921.1| methionyl-tRNA formyltransferase [Escherichia coli KTE16]
gi|432423693|ref|ZP_19666231.1| methionyl-tRNA formyltransferase [Escherichia coli KTE178]
gi|432467599|ref|ZP_19709677.1| methionyl-tRNA formyltransferase [Escherichia coli KTE205]
gi|432501842|ref|ZP_19743593.1| methionyl-tRNA formyltransferase [Escherichia coli KTE216]
gi|432515678|ref|ZP_19752893.1| methionyl-tRNA formyltransferase [Escherichia coli KTE224]
gi|432555371|ref|ZP_19792089.1| methionyl-tRNA formyltransferase [Escherichia coli KTE47]
gi|432560555|ref|ZP_19797210.1| methionyl-tRNA formyltransferase [Escherichia coli KTE49]
gi|432575520|ref|ZP_19811991.1| methionyl-tRNA formyltransferase [Escherichia coli KTE55]
gi|432584812|ref|ZP_19821203.1| methionyl-tRNA formyltransferase [Escherichia coli KTE57]
gi|432589665|ref|ZP_19826017.1| methionyl-tRNA formyltransferase [Escherichia coli KTE58]
gi|432599534|ref|ZP_19835804.1| methionyl-tRNA formyltransferase [Escherichia coli KTE62]
gi|432613293|ref|ZP_19849450.1| methionyl-tRNA formyltransferase [Escherichia coli KTE72]
gi|432647960|ref|ZP_19883745.1| methionyl-tRNA formyltransferase [Escherichia coli KTE86]
gi|432657523|ref|ZP_19893219.1| methionyl-tRNA formyltransferase [Escherichia coli KTE93]
gi|432696152|ref|ZP_19931344.1| methionyl-tRNA formyltransferase [Escherichia coli KTE162]
gi|432700804|ref|ZP_19935948.1| methionyl-tRNA formyltransferase [Escherichia coli KTE169]
gi|432707629|ref|ZP_19942705.1| methionyl-tRNA formyltransferase [Escherichia coli KTE6]
gi|432747266|ref|ZP_19981927.1| methionyl-tRNA formyltransferase [Escherichia coli KTE43]
gi|432756215|ref|ZP_19990759.1| methionyl-tRNA formyltransferase [Escherichia coli KTE22]
gi|432780295|ref|ZP_20014515.1| methionyl-tRNA formyltransferase [Escherichia coli KTE59]
gi|432789288|ref|ZP_20023415.1| methionyl-tRNA formyltransferase [Escherichia coli KTE65]
gi|432822723|ref|ZP_20056411.1| methionyl-tRNA formyltransferase [Escherichia coli KTE118]
gi|432824177|ref|ZP_20057847.1| methionyl-tRNA formyltransferase [Escherichia coli KTE123]
gi|432906992|ref|ZP_20115468.1| methionyl-tRNA formyltransferase [Escherichia coli KTE194]
gi|432922419|ref|ZP_20125263.1| methionyl-tRNA formyltransferase [Escherichia coli KTE173]
gi|432929149|ref|ZP_20130199.1| methionyl-tRNA formyltransferase [Escherichia coli KTE175]
gi|432940097|ref|ZP_20138011.1| methionyl-tRNA formyltransferase [Escherichia coli KTE183]
gi|432973563|ref|ZP_20162406.1| methionyl-tRNA formyltransferase [Escherichia coli KTE207]
gi|432982731|ref|ZP_20171501.1| methionyl-tRNA formyltransferase [Escherichia coli KTE211]
gi|432987135|ref|ZP_20175847.1| methionyl-tRNA formyltransferase [Escherichia coli KTE215]
gi|433006868|ref|ZP_20195291.1| methionyl-tRNA formyltransferase [Escherichia coli KTE227]
gi|433009483|ref|ZP_20197895.1| methionyl-tRNA formyltransferase [Escherichia coli KTE229]
gi|433040286|ref|ZP_20227877.1| methionyl-tRNA formyltransferase [Escherichia coli KTE113]
gi|433074538|ref|ZP_20261179.1| methionyl-tRNA formyltransferase [Escherichia coli KTE129]
gi|433084213|ref|ZP_20270660.1| methionyl-tRNA formyltransferase [Escherichia coli KTE133]
gi|433098087|ref|ZP_20284262.1| methionyl-tRNA formyltransferase [Escherichia coli KTE139]
gi|433102873|ref|ZP_20288945.1| methionyl-tRNA formyltransferase [Escherichia coli KTE145]
gi|433107535|ref|ZP_20293499.1| methionyl-tRNA formyltransferase [Escherichia coli KTE148]
gi|433121850|ref|ZP_20307510.1| methionyl-tRNA formyltransferase [Escherichia coli KTE157]
gi|433145891|ref|ZP_20331024.1| methionyl-tRNA formyltransferase [Escherichia coli KTE168]
gi|433155433|ref|ZP_20340365.1| methionyl-tRNA formyltransferase [Escherichia coli KTE176]
gi|433165274|ref|ZP_20350004.1| methionyl-tRNA formyltransferase [Escherichia coli KTE179]
gi|433170273|ref|ZP_20354893.1| methionyl-tRNA formyltransferase [Escherichia coli KTE180]
gi|433185001|ref|ZP_20369238.1| methionyl-tRNA formyltransferase [Escherichia coli KTE85]
gi|433190092|ref|ZP_20374180.1| methionyl-tRNA formyltransferase [Escherichia coli KTE88]
gi|433200031|ref|ZP_20383918.1| methionyl-tRNA formyltransferase [Escherichia coli KTE94]
gi|122990716|sp|Q1R645.1|FMT_ECOUT RecName: Full=Methionyl-tRNA formyltransferase
gi|166214893|sp|A1AGH9.1|FMT_ECOK1 RecName: Full=Methionyl-tRNA formyltransferase
gi|226704295|sp|B7MCQ3.1|FMT_ECO45 RecName: Full=Methionyl-tRNA formyltransferase
gi|254789354|sp|B7N172.1|FMT_ECO81 RecName: Full=Methionyl-tRNA formyltransferase
gi|91074288|gb|ABE09169.1| methionyl-tRNA formyltransferase [Escherichia coli UTI89]
gi|115514694|gb|ABJ02769.1| methionyl-tRNA formyltransferase [Escherichia coli APEC O1]
gi|218367118|emb|CAR04892.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli S88]
gi|218429138|emb|CAR10090.2| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli ED1a]
gi|222034996|emb|CAP77739.1| Methionyl-tRNA formyltransferase [Escherichia coli LF82]
gi|226902281|gb|EEH88540.1| methionyl-tRNA formyltransferase [Escherichia sp. 3_2_53FAA]
gi|281180322|dbj|BAI56652.1| methionyl-tRNA formyltransferase [Escherichia coli SE15]
gi|294493320|gb|ADE92076.1| methionyl-tRNA formyltransferase [Escherichia coli IHE3034]
gi|305850766|gb|EFM51223.1| methionyl-tRNA formyltransferase [Escherichia coli NC101]
gi|307628322|gb|ADN72626.1| methionyl-tRNA formyltransferase [Escherichia coli UM146]
gi|312947838|gb|ADR28665.1| methionyl-tRNA formyltransferase [Escherichia coli O83:H1 str. NRG
857C]
gi|315284578|gb|EFU44023.1| methionyl-tRNA formyltransferase [Escherichia coli MS 110-3]
gi|323950201|gb|EGB46083.1| methionyl-tRNA formyltransferase [Escherichia coli H252]
gi|323954590|gb|EGB50373.1| methionyl-tRNA formyltransferase [Escherichia coli H263]
gi|333971396|gb|AEG38201.1| Methionyl-tRNA formyltransferase [Escherichia coli NA114]
gi|355349952|gb|EHF99153.1| methionyl-tRNA formyltransferase [Escherichia coli cloneA_i1]
gi|371604548|gb|EHN93175.1| methionyl-tRNA formyltransferase [Escherichia coli H397]
gi|380346685|gb|EIA34977.1| methionyl-tRNA formyltransferase [Escherichia coli SCI-07]
gi|388391665|gb|EIL53117.1| methionyl-tRNA formyltransferase [Escherichia coli KD1]
gi|388419538|gb|EIL79267.1| methionyl-tRNA formyltransferase [Escherichia coli HM605]
gi|430874044|gb|ELB97609.1| methionyl-tRNA formyltransferase [Escherichia coli KTE4]
gi|430883384|gb|ELC06378.1| methionyl-tRNA formyltransferase [Escherichia coli KTE5]
gi|430903572|gb|ELC25308.1| methionyl-tRNA formyltransferase [Escherichia coli KTE15]
gi|430904511|gb|ELC26220.1| methionyl-tRNA formyltransferase [Escherichia coli KTE16]
gi|430942037|gb|ELC62175.1| methionyl-tRNA formyltransferase [Escherichia coli KTE178]
gi|430991219|gb|ELD07623.1| methionyl-tRNA formyltransferase [Escherichia coli KTE205]
gi|431026021|gb|ELD39096.1| methionyl-tRNA formyltransferase [Escherichia coli KTE216]
gi|431038373|gb|ELD49269.1| methionyl-tRNA formyltransferase [Escherichia coli KTE224]
gi|431081015|gb|ELD87794.1| methionyl-tRNA formyltransferase [Escherichia coli KTE47]
gi|431088616|gb|ELD94486.1| methionyl-tRNA formyltransferase [Escherichia coli KTE49]
gi|431104801|gb|ELE09165.1| methionyl-tRNA formyltransferase [Escherichia coli KTE55]
gi|431114712|gb|ELE18239.1| methionyl-tRNA formyltransferase [Escherichia coli KTE57]
gi|431117794|gb|ELE21018.1| methionyl-tRNA formyltransferase [Escherichia coli KTE58]
gi|431128350|gb|ELE30534.1| methionyl-tRNA formyltransferase [Escherichia coli KTE62]
gi|431146315|gb|ELE47751.1| methionyl-tRNA formyltransferase [Escherichia coli KTE72]
gi|431177933|gb|ELE77846.1| methionyl-tRNA formyltransferase [Escherichia coli KTE86]
gi|431187634|gb|ELE87133.1| methionyl-tRNA formyltransferase [Escherichia coli KTE93]
gi|431231378|gb|ELF27139.1| methionyl-tRNA formyltransferase [Escherichia coli KTE162]
gi|431239915|gb|ELF34377.1| methionyl-tRNA formyltransferase [Escherichia coli KTE169]
gi|431255163|gb|ELF48417.1| methionyl-tRNA formyltransferase [Escherichia coli KTE6]
gi|431289166|gb|ELF79907.1| methionyl-tRNA formyltransferase [Escherichia coli KTE43]
gi|431299756|gb|ELF89322.1| methionyl-tRNA formyltransferase [Escherichia coli KTE22]
gi|431324687|gb|ELG12103.1| methionyl-tRNA formyltransferase [Escherichia coli KTE59]
gi|431335168|gb|ELG22308.1| methionyl-tRNA formyltransferase [Escherichia coli KTE65]
gi|431365456|gb|ELG51961.1| methionyl-tRNA formyltransferase [Escherichia coli KTE118]
gi|431378702|gb|ELG63693.1| methionyl-tRNA formyltransferase [Escherichia coli KTE123]
gi|431427958|gb|ELH09900.1| methionyl-tRNA formyltransferase [Escherichia coli KTE194]
gi|431435417|gb|ELH17026.1| methionyl-tRNA formyltransferase [Escherichia coli KTE173]
gi|431440557|gb|ELH21885.1| methionyl-tRNA formyltransferase [Escherichia coli KTE175]
gi|431459991|gb|ELH40280.1| methionyl-tRNA formyltransferase [Escherichia coli KTE183]
gi|431478910|gb|ELH58653.1| methionyl-tRNA formyltransferase [Escherichia coli KTE207]
gi|431489329|gb|ELH68956.1| methionyl-tRNA formyltransferase [Escherichia coli KTE211]
gi|431494380|gb|ELH73968.1| methionyl-tRNA formyltransferase [Escherichia coli KTE215]
gi|431510315|gb|ELH88560.1| methionyl-tRNA formyltransferase [Escherichia coli KTE227]
gi|431521409|gb|ELH98654.1| methionyl-tRNA formyltransferase [Escherichia coli KTE229]
gi|431549193|gb|ELI23280.1| methionyl-tRNA formyltransferase [Escherichia coli KTE113]
gi|431584295|gb|ELI56279.1| methionyl-tRNA formyltransferase [Escherichia coli KTE129]
gi|431598484|gb|ELI68276.1| methionyl-tRNA formyltransferase [Escherichia coli KTE133]
gi|431613115|gb|ELI82316.1| methionyl-tRNA formyltransferase [Escherichia coli KTE139]
gi|431616670|gb|ELI85695.1| methionyl-tRNA formyltransferase [Escherichia coli KTE145]
gi|431624660|gb|ELI93258.1| methionyl-tRNA formyltransferase [Escherichia coli KTE148]
gi|431639568|gb|ELJ07423.1| methionyl-tRNA formyltransferase [Escherichia coli KTE157]
gi|431658767|gb|ELJ25677.1| methionyl-tRNA formyltransferase [Escherichia coli KTE168]
gi|431671150|gb|ELJ37436.1| methionyl-tRNA formyltransferase [Escherichia coli KTE176]
gi|431684378|gb|ELJ49986.1| methionyl-tRNA formyltransferase [Escherichia coli KTE179]
gi|431685043|gb|ELJ50646.1| methionyl-tRNA formyltransferase [Escherichia coli KTE180]
gi|431702993|gb|ELJ67685.1| methionyl-tRNA formyltransferase [Escherichia coli KTE88]
gi|431703055|gb|ELJ67746.1| methionyl-tRNA formyltransferase [Escherichia coli KTE85]
gi|431718322|gb|ELJ82401.1| methionyl-tRNA formyltransferase [Escherichia coli KTE94]
Length = 315
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTTTKAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL +Q KK +S + +N
Sbjct: 271 QGIQVATGDGILNLLSMQPAGKKAMSVQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|411011231|ref|ZP_11387560.1| methionyl-tRNA formyltransferase [Aeromonas aquariorum AAK1]
Length = 314
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I ++TS +L +KL +L ++DTI + T + Q + +YA + K EA +D
Sbjct: 158 IAADETSASLYDKLAELGPQALVDTINAMAAGDTA--AEAQDDALANYAEKLSKEEARID 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WS+ A I R I AFNP+P IS+ + + +K+W+A ++ + ++ GT+L +
Sbjct: 216 WSMDAAAIERCIRAFNPWP------ISWFEVADQTVKVWQAEVITQDHGQRAGTLLKAD- 268
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V GK V++LL LQ KK +S T+ +N
Sbjct: 269 KQGIDVATGKGVLRLLTLQPPGKKAMSVTDLLN 301
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L +S+H +V + T+PD +GRG KL SPVK+ AL H + +
Sbjct: 4 LKLIFAGTPDFAARHLAALLSSDHEVVAVYTQPDKPAGRGQKLTASPVKELALAHDLPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPASLR--------KEEAQAELAALGADLMVVVAYGLILP 95
>gi|440730994|ref|ZP_20911044.1| methionyl-tRNA formyltransferase [Xanthomonas translucens DAR61454]
gi|440375618|gb|ELQ12321.1| methionyl-tRNA formyltransferase [Xanthomonas translucens DAR61454]
Length = 307
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 131/312 (41%), Gaps = 80/312 (25%)
Query: 1 MKIIFAGT------SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK 54
MKI+FAGT S+ AAA H +V + T+PD +GRG L SPVK A+
Sbjct: 1 MKIVFAGTPDFAVPSLRAAA-------QRHEVVAVYTQPDRPAGRGRGLTPSPVKLEAVA 53
Query: 55 -----------------HSIKIIQP----------------ISLKLNG----------KY 71
+++ +QP +++ +G ++
Sbjct: 54 RGIPVLQPQTLRSPEALQTLRALQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRW 113
Query: 72 HKIA----------NETHKLLNKIE--FDIMIVM-----GILPEDTSLTLQNKLEKLSKI 114
A +ET L ++E D V+ I DT L ++L L
Sbjct: 114 RGAAPIQRAIEAGDSETGVCLMQMEAGLDTGPVLMSQRTPIGDSDTGGQLHDRLAALGAQ 173
Query: 115 LIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
++ D + + + + +PQ +G +YA + K +A LDW + ++ AFNP+P
Sbjct: 174 VLADGLGLLRAGI-RPVPQPQPEVGVTYAHKLDKAQARLDWQQPTAQLALRVRAFNPWPI 232
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKN 234
A+ + ++I A AL + + PG +L + GI + CG+ ++L LQ+
Sbjct: 233 AEAVLAG-----ERVRIHGAVALELAHAQPPGMVLAAS-KQGIDIACGQGALRLRVLQRE 286
Query: 235 NKKKISATEFIN 246
K I+A +++N
Sbjct: 287 GGKAITAADYLN 298
>gi|26249872|ref|NP_755912.1| methionyl-tRNA formyltransferase [Escherichia coli CFT073]
gi|300979824|ref|ZP_07174726.1| methionyl-tRNA formyltransferase [Escherichia coli MS 45-1]
gi|386631167|ref|YP_006150887.1| methionyl-tRNA formyltransferase [Escherichia coli str. 'clone D
i2']
gi|386636087|ref|YP_006155806.1| methionyl-tRNA formyltransferase [Escherichia coli str. 'clone D
i14']
gi|386640883|ref|YP_006107681.1| methionyl-tRNA formyltransferase [Escherichia coli ABU 83972]
gi|422364952|ref|ZP_16445461.1| methionyl-tRNA formyltransferase [Escherichia coli MS 153-1]
gi|432413509|ref|ZP_19656163.1| methionyl-tRNA formyltransferase [Escherichia coli KTE39]
gi|432433500|ref|ZP_19675924.1| methionyl-tRNA formyltransferase [Escherichia coli KTE187]
gi|432438096|ref|ZP_19680479.1| methionyl-tRNA formyltransferase [Escherichia coli KTE188]
gi|432442772|ref|ZP_19685107.1| methionyl-tRNA formyltransferase [Escherichia coli KTE189]
gi|432447892|ref|ZP_19690188.1| methionyl-tRNA formyltransferase [Escherichia coli KTE191]
gi|432458408|ref|ZP_19700584.1| methionyl-tRNA formyltransferase [Escherichia coli KTE201]
gi|432497401|ref|ZP_19739193.1| methionyl-tRNA formyltransferase [Escherichia coli KTE214]
gi|432506159|ref|ZP_19747878.1| methionyl-tRNA formyltransferase [Escherichia coli KTE220]
gi|432525614|ref|ZP_19762732.1| methionyl-tRNA formyltransferase [Escherichia coli KTE230]
gi|432570515|ref|ZP_19807021.1| methionyl-tRNA formyltransferase [Escherichia coli KTE53]
gi|432594481|ref|ZP_19830793.1| methionyl-tRNA formyltransferase [Escherichia coli KTE60]
gi|432652880|ref|ZP_19888625.1| methionyl-tRNA formyltransferase [Escherichia coli KTE87]
gi|432785253|ref|ZP_20019430.1| methionyl-tRNA formyltransferase [Escherichia coli KTE63]
gi|432846367|ref|ZP_20079009.1| methionyl-tRNA formyltransferase [Escherichia coli KTE141]
gi|432975488|ref|ZP_20164322.1| methionyl-tRNA formyltransferase [Escherichia coli KTE209]
gi|432997048|ref|ZP_20185630.1| methionyl-tRNA formyltransferase [Escherichia coli KTE218]
gi|433001645|ref|ZP_20190163.1| methionyl-tRNA formyltransferase [Escherichia coli KTE223]
gi|433015587|ref|ZP_20203921.1| methionyl-tRNA formyltransferase [Escherichia coli KTE104]
gi|433025152|ref|ZP_20213125.1| methionyl-tRNA formyltransferase [Escherichia coli KTE106]
gi|433059768|ref|ZP_20246804.1| methionyl-tRNA formyltransferase [Escherichia coli KTE124]
gi|433088937|ref|ZP_20275302.1| methionyl-tRNA formyltransferase [Escherichia coli KTE137]
gi|433117163|ref|ZP_20302948.1| methionyl-tRNA formyltransferase [Escherichia coli KTE153]
gi|433126852|ref|ZP_20312398.1| methionyl-tRNA formyltransferase [Escherichia coli KTE160]
gi|433140916|ref|ZP_20326161.1| methionyl-tRNA formyltransferase [Escherichia coli KTE167]
gi|433150921|ref|ZP_20335921.1| methionyl-tRNA formyltransferase [Escherichia coli KTE174]
gi|433209410|ref|ZP_20393077.1| methionyl-tRNA formyltransferase [Escherichia coli KTE97]
gi|433214261|ref|ZP_20397843.1| methionyl-tRNA formyltransferase [Escherichia coli KTE99]
gi|433325904|ref|ZP_20402910.1| methionyl-tRNA formyltransferase [Escherichia coli J96]
gi|442607476|ref|ZP_21022246.1| Methionyl-tRNA formyltransferase [Escherichia coli Nissle 1917]
gi|33301135|sp|Q8FD13.3|FMT_ECOL6 RecName: Full=Methionyl-tRNA formyltransferase
gi|26110300|gb|AAN82486.1|AE016767_246 Methionyl-tRNA formyltransferase [Escherichia coli CFT073]
gi|300409430|gb|EFJ92968.1| methionyl-tRNA formyltransferase [Escherichia coli MS 45-1]
gi|307555375|gb|ADN48150.1| methionyl-tRNA formyltransferase [Escherichia coli ABU 83972]
gi|315292337|gb|EFU51689.1| methionyl-tRNA formyltransferase [Escherichia coli MS 153-1]
gi|355422066|gb|AER86263.1| methionyl-tRNA formyltransferase [Escherichia coli str. 'clone D
i2']
gi|355426986|gb|AER91182.1| methionyl-tRNA formyltransferase [Escherichia coli str. 'clone D
i14']
gi|430933338|gb|ELC53744.1| methionyl-tRNA formyltransferase [Escherichia coli KTE39]
gi|430950675|gb|ELC69903.1| methionyl-tRNA formyltransferase [Escherichia coli KTE187]
gi|430960650|gb|ELC78701.1| methionyl-tRNA formyltransferase [Escherichia coli KTE188]
gi|430963815|gb|ELC81394.1| methionyl-tRNA formyltransferase [Escherichia coli KTE189]
gi|430970972|gb|ELC87994.1| methionyl-tRNA formyltransferase [Escherichia coli KTE191]
gi|430979866|gb|ELC96630.1| methionyl-tRNA formyltransferase [Escherichia coli KTE201]
gi|431020936|gb|ELD34265.1| methionyl-tRNA formyltransferase [Escherichia coli KTE214]
gi|431035507|gb|ELD46890.1| methionyl-tRNA formyltransferase [Escherichia coli KTE220]
gi|431048725|gb|ELD58693.1| methionyl-tRNA formyltransferase [Escherichia coli KTE230]
gi|431097588|gb|ELE02915.1| methionyl-tRNA formyltransferase [Escherichia coli KTE53]
gi|431125938|gb|ELE28292.1| methionyl-tRNA formyltransferase [Escherichia coli KTE60]
gi|431187295|gb|ELE86796.1| methionyl-tRNA formyltransferase [Escherichia coli KTE87]
gi|431326332|gb|ELG13678.1| methionyl-tRNA formyltransferase [Escherichia coli KTE63]
gi|431392602|gb|ELG76173.1| methionyl-tRNA formyltransferase [Escherichia coli KTE141]
gi|431486302|gb|ELH65952.1| methionyl-tRNA formyltransferase [Escherichia coli KTE209]
gi|431502646|gb|ELH81531.1| methionyl-tRNA formyltransferase [Escherichia coli KTE218]
gi|431504627|gb|ELH83251.1| methionyl-tRNA formyltransferase [Escherichia coli KTE223]
gi|431527252|gb|ELI03974.1| methionyl-tRNA formyltransferase [Escherichia coli KTE104]
gi|431532317|gb|ELI08877.1| methionyl-tRNA formyltransferase [Escherichia coli KTE106]
gi|431566708|gb|ELI39728.1| methionyl-tRNA formyltransferase [Escherichia coli KTE124]
gi|431602387|gb|ELI71826.1| methionyl-tRNA formyltransferase [Escherichia coli KTE137]
gi|431631516|gb|ELI99823.1| methionyl-tRNA formyltransferase [Escherichia coli KTE153]
gi|431641421|gb|ELJ09160.1| methionyl-tRNA formyltransferase [Escherichia coli KTE160]
gi|431656977|gb|ELJ23949.1| methionyl-tRNA formyltransferase [Escherichia coli KTE167]
gi|431667787|gb|ELJ34364.1| methionyl-tRNA formyltransferase [Escherichia coli KTE174]
gi|431728546|gb|ELJ92224.1| methionyl-tRNA formyltransferase [Escherichia coli KTE97]
gi|431732556|gb|ELJ96008.1| methionyl-tRNA formyltransferase [Escherichia coli KTE99]
gi|432345918|gb|ELL40410.1| methionyl-tRNA formyltransferase [Escherichia coli J96]
gi|441711333|emb|CCQ08223.1| Methionyl-tRNA formyltransferase [Escherichia coli Nissle 1917]
Length = 315
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTTTKAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL +Q KK +S + +N
Sbjct: 271 QGIQVATGDGILNLLSMQPAGKKAMSVQDLLN 302
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ ++A+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQQRVAD--------LQADVMVVVAYGLILP 96
>gi|452974523|gb|EME74343.1| methionyl-tRNA formyltransferase [Bacillus sonorensis L12]
Length = 317
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 126/309 (40%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L+TL +++V ++T+PD GR L PVK+ AL+H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLNTLIKDGYDVVGVVTQPDRPKGRKKVLTPPPVKEEALRHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++ + KI L+ F I + +LPE
Sbjct: 63 PEKVREEQETDKILELKPDLIVTAAFGQILPKKLLDYPAYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTK--------------------- 129
T +T+ +EKL D + K+E D+ +
Sbjct: 123 YAILEGKQKTGVTIMYMVEKLD---AGDMLSKVEVDIEENDNVGTLHDKLSKAGAALLSE 179
Query: 130 ---------LFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + Q +YAP IK+ + +DWS + + ++ +P+P A T
Sbjct: 180 TVPKVLDGSVTPEKQDEEKATYAPNIKREQERIDWSKPGEVLYNQVRGLHPWPVAYTTLG 239
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKI 239
+ LK+W A + +PG I+ + +GI+V G +KL E+Q KK++
Sbjct: 240 G-----QILKVWAAQKVPAAEQAEPGEIITIE-KDGIVVASGNGTALKLTEVQPAGKKRM 293
Query: 240 SATEFINGC 248
+F+ G
Sbjct: 294 KGEDFVRGA 302
>gi|384085892|ref|ZP_09997067.1| methionyl-tRNA formyltransferase [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 311
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDT+ +L ++L L K + + + + +S + SYA +KK EA+LD
Sbjct: 157 IHPEDTAASLHDRLALLGKAALRQALDALWAGTATALVQDESRV--SYARKLKKEEALLD 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A + R++ AFNP P A T + ++K L++W+ ++ PG+I ++
Sbjct: 215 WQRPAAMLDRQVRAFNPSPIAHTLF-----REKGLRVWQVRPIATTVDIAPGSITTIHKE 269
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ V CG ++LL LQ K K+SA +FI G
Sbjct: 270 S-FTVACGDGQLELLLLQPAGKGKLSAGDFIRG 301
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+FAGT A +L+ L +V +LT+PD +GRG L SPVK+ A + I + Q
Sbjct: 4 RIVFAGTPEFARIVLEELLAGPEVLVGVLTQPDRPAGRGRHLQESPVKQLAREAGIPVFQ 63
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
P S K E LL ++ D++IV+ ILP+
Sbjct: 64 PESCK--------TPEALDLLRSLQPDLLIVVAYGQILPQ 95
>gi|416336395|ref|ZP_11672958.1| Methionyl-tRNA formyltransferase [Escherichia coli WV_060327]
gi|432803469|ref|ZP_20037421.1| methionyl-tRNA formyltransferase [Escherichia coli KTE84]
gi|320195379|gb|EFW70006.1| Methionyl-tRNA formyltransferase [Escherichia coli WV_060327]
gi|431346008|gb|ELG32921.1| methionyl-tRNA formyltransferase [Escherichia coli KTE84]
Length = 315
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTTTKAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL +Q KK +S + +N
Sbjct: 271 QGIQVATGDGILNLLSMQPAGKKAMSVQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|110643526|ref|YP_671256.1| methionyl-tRNA formyltransferase [Escherichia coli 536]
gi|191174466|ref|ZP_03035967.1| methionyl-tRNA formyltransferase [Escherichia coli F11]
gi|300973967|ref|ZP_07172374.1| methionyl-tRNA formyltransferase [Escherichia coli MS 200-1]
gi|422373690|ref|ZP_16453989.1| methionyl-tRNA formyltransferase [Escherichia coli MS 60-1]
gi|432472634|ref|ZP_19714671.1| methionyl-tRNA formyltransferase [Escherichia coli KTE206]
gi|432715134|ref|ZP_19950161.1| methionyl-tRNA formyltransferase [Escherichia coli KTE8]
gi|433079473|ref|ZP_20265992.1| methionyl-tRNA formyltransferase [Escherichia coli KTE131]
gi|123343556|sp|Q0TCH4.1|FMT_ECOL5 RecName: Full=Methionyl-tRNA formyltransferase
gi|110345118|gb|ABG71355.1| methionyl-tRNA formyltransferase [Escherichia coli 536]
gi|190905274|gb|EDV64912.1| methionyl-tRNA formyltransferase [Escherichia coli F11]
gi|300308977|gb|EFJ63497.1| methionyl-tRNA formyltransferase [Escherichia coli MS 200-1]
gi|324014964|gb|EGB84183.1| methionyl-tRNA formyltransferase [Escherichia coli MS 60-1]
gi|430995625|gb|ELD11915.1| methionyl-tRNA formyltransferase [Escherichia coli KTE206]
gi|431253065|gb|ELF46577.1| methionyl-tRNA formyltransferase [Escherichia coli KTE8]
gi|431594310|gb|ELI64592.1| methionyl-tRNA formyltransferase [Escherichia coli KTE131]
Length = 315
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTTTKAAPGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL +Q KK +S + +N
Sbjct: 271 QGIQVATGDGILNLLSMQPAGKKAMSVQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVQAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|452126568|ref|ZP_21939151.1| methionyl-tRNA formyltransferase [Bordetella holmesii F627]
gi|452129944|ref|ZP_21942517.1| methionyl-tRNA formyltransferase [Bordetella holmesii H558]
gi|451921663|gb|EMD71808.1| methionyl-tRNA formyltransferase [Bordetella holmesii F627]
gi|451922804|gb|EMD72948.1| methionyl-tRNA formyltransferase [Bordetella holmesii H558]
Length = 315
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A L L + H+I L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPDFARQALQALLAAGHDIALVLTQPDRPAGRGLKLTPSPVKEAALDAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+L+G+Y A + L I ++M+V ILP
Sbjct: 61 QPRSLRLDGRYPDEARAAQQRLRDIAPEVMVVAAYGLILP 100
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 11/161 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M++ I+P + ++ L ++L I++ + +++ L + Q G +YA +
Sbjct: 155 MLLERIVPIGAQTSAAVLHDELADAGAAAIVEALAQLD----DLRPRKQPAEGVTYAAKL 210
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
+K EA LD+ SAKT+ R+I AFNP PGA + + +K+W+A AL ++ PG
Sbjct: 211 EKAEAALDFEQSAKTLERRIRAFNPVPGAS---LRLPGLAEPVKVWRAQALDEQTCAAPG 267
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
T++ GI + G V++LLELQK K+ F+ G
Sbjct: 268 TVVRAT-QQGIDLATGHGVLRLLELQKAGGKRQEVDVFVRG 307
>gi|397660264|ref|YP_006500966.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca E718]
gi|394348311|gb|AFN34432.1| Methionyl-tRNA formyltransferase [Klebsiella oxytoca E718]
Length = 315
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ D+ + G I EDTS TL +KL L +I+T+K++
Sbjct: 130 AGDTETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGTLYDKLANLGPQGLIETLKQLAA 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
K + ++ + ++A + K EA +DWSL A + R I AFNP+P +I +
Sbjct: 190 GTAKPVVQDEALV--THAQKLSKEEARIDWSLPAAQLERCIRAFNPWP---MSWIEIDGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+W+A + + +T +PGTI+ GI V V+ LL LQ KK +SA + +
Sbjct: 245 P--VKVWQASVIDVATTAEPGTIIEAT-KQGIQVATSDGVLNLLSLQPAGKKAMSAQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLHALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP SL+ E +L++ + D+M+V+
Sbjct: 65 QPASLR--------PQENQQLVSDLRADVMVVV 89
>gi|421731757|ref|ZP_16170880.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451347056|ref|YP_007445687.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens IT-45]
gi|407073970|gb|EKE46960.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449850814|gb|AGF27806.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens IT-45]
Length = 317
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 132/312 (42%), Gaps = 69/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK A +H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLF---- 131
T +T+ +EKL +I I ++E D T KL
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSIAGAKLLSETV 181
Query: 132 -------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
KP Q +YAP IK+ + +DW+ + I +I NP+P A T
Sbjct: 182 PNVISGNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYTTL--- 238
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISA 241
+ +K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++
Sbjct: 239 --NGQTIKVWASEKVAAKTDAAPGTVIRTE-QNGIVVASGNSTALLITELQPAGKKRMKG 295
Query: 242 TEFINGCIKNIK 253
+F+ G KN++
Sbjct: 296 EDFVRG--KNVQ 305
>gi|452855520|ref|YP_007497203.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079780|emb|CCP21537.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 316
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 69/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK A +H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLF---- 131
T +T+ +EKL +I I ++E D T KL
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSIAGAKLLSETV 181
Query: 132 -------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
KP Q +YAP IK+ + +DW+ + I +I NP+P A T ++
Sbjct: 182 PNVISGNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYT-TLNG 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISA 241
QN +K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++
Sbjct: 241 QN----MKVWASEKVAAKTEAAPGTVIRTE-QNGIVVASGNSTALLITELQPAGKKRMKG 295
Query: 242 TEFINGCIKNIK 253
+F G KN++
Sbjct: 296 EDFARG--KNVQ 305
>gi|414157002|ref|ZP_11413303.1| methionyl-tRNA formyltransferase [Streptococcus sp. F0442]
gi|410869995|gb|EKS17955.1| methionyl-tRNA formyltransferase [Streptococcus sp. F0442]
Length = 311
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 136/311 (43%), Gaps = 70/311 (22%)
Query: 2 KIIFAGTSISAAAIL-DTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L +S + I+ ++T+PD GR ++ +PVK+ AL+H + ++
Sbjct: 3 KLIFMGTPDFSATVLKGLLADSRYEILAVVTQPDRKVGRKKEIRMTPVKQVALEHQLPVL 62
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP +SL +G KY A
Sbjct: 63 QPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGGAPIH 122
Query: 79 HKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ L+N E + +M IL ED TL KL L + L++DT+
Sbjct: 123 YALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLLDTLP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ PQ +++P I E VLDW+ + + + +I NP+P A T
Sbjct: 183 A--YLAGEIKPSPQDPSLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPVAHTLL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F K+++A E PG ++ ++ ++V G+ + L +Q K K+S
Sbjct: 239 --NGQRF-KVYEAEL--CEGNGNPGEVIGLSKKE-LVVATGEGALSLKVVQPAGKPKMSI 292
Query: 242 TEFINGCIKNI 252
T+F+NG + +
Sbjct: 293 TDFLNGAGRQL 303
>gi|381209845|ref|ZP_09916916.1| methionyl-tRNA formyltransferase [Lentibacillus sp. Grbi]
Length = 313
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 136/313 (43%), Gaps = 70/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+++F GT + IL+TL ++E+ +VL++T+PD GR + PVKK A K++I ++Q
Sbjct: 3 RLVFMGTPEFSVPILETLVHTEYELVLVVTQPDRPKGRKKTVTPPPVKKTAEKYNIPVLQ 62
Query: 62 PISLKLNGKYHKI-ANETH-------------KLLNKIEFD-IMIVMGILPE-------- 98
P KL +Y KI A E +LL+ EF I + +LPE
Sbjct: 63 P--EKLRDEYKKILAYEPDIIITAAYGQILPKELLDIPEFGCINVHASLLPELRGGAPIH 120
Query: 99 -------------------------------------DTSLTLQNKLEKLSKILIIDTIK 121
D TL +KL ++ L+ DT+
Sbjct: 121 YAILEGKEETGITLMYMAEKLDAGDIIAQQPVKIADTDHVGTLHDKLSQIGADLLADTLP 180
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+I K+ + Q ++A IK+++ +DW I I +P+P + T Y
Sbjct: 181 EIF--ARKITPESQDESKATFAFNIKRDQERIDWQNPHNVIYNHIRGLHPWPVSFTQY-- 236
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKIS 240
+KIW KPG ++++ + +VVCG K I++ E+Q KK+++
Sbjct: 237 ---DGDLMKIWWGEMDDQIYKGKPGEVVDIIDNEAFVVVCGNKKGIRVTEIQPAGKKRMT 293
Query: 241 ATEFINGCIKNIK 253
++++ G +K
Sbjct: 294 VSQYLQGAPDRMK 306
>gi|121606765|ref|YP_984094.1| methionyl-tRNA formyltransferase [Polaromonas naphthalenivorans
CJ2]
gi|166215496|sp|A1VU45.1|FMT_POLNA RecName: Full=Methionyl-tRNA formyltransferase
gi|120595734|gb|ABM39173.1| methionyl-tRNA formyltransferase [Polaromonas naphthalenivorans
CJ2]
Length = 323
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 88 DIMIV--MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPL 145
D+++V + I DT+ TL +KL L +I+ ++ + +P + +YA
Sbjct: 154 DMLLVEKLAIQATDTTATLHDKLAALGGQMIVQALELAAAGQLEPVRQPAEGV--TYAHK 211
Query: 146 IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH--ALSIESTK 203
I+K+EA +DW+ +I R I A PFPGA S Q +K+W + + S
Sbjct: 212 IEKSEAAVDWTQPVASIDRHIRAMTPFPGA-----SAQIGSDTVKLWSSEIDSCSCPPDM 266
Query: 204 KPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ G IL+ N +G+ V CG V+K+ ELQ+ K++ A +F+ G
Sbjct: 267 RKGLILSAN-SDGVRVACGDGVLKVTELQRAGGKRLPAADFLRG 309
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L L+ + I L+LT+PD +GRGMKL S VK++A H+I +
Sbjct: 1 MRVIFAGTPEFARVALAQLHGAGFEIPLVLTQPDRPAGRGMKLQASAVKQWAESHAIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY + A + + D+M+V ILP+
Sbjct: 61 QPRSLRLDGKYPEDAAAARAAIEAAQADVMVVAAYGLILPQ 101
>gi|408374190|ref|ZP_11171879.1| methionyl-tRNA formyltransferase [Alcanivorax hongdengensis A-11-3]
gi|407765851|gb|EKF74299.1| methionyl-tRNA formyltransferase [Alcanivorax hongdengensis A-11-3]
Length = 318
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 131/309 (42%), Gaps = 70/309 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYA-------- 52
+++ FAGT AAA L + +S+H +V +LT+PD +GRG ++ SPVK+ A
Sbjct: 4 LRLAFAGTPDFAAASLQAVLDSDHQVVAVLTQPDRAAGRGKRVQKSPVKQLAEAHGIDVL 63
Query: 53 ---------LKHSIKIIQ----------------------------------------PI 63
++ ++ +Q PI
Sbjct: 64 QPHNLKGDDIRQQLRDLQLDALVVVAYGLIIPRAVLDIPRQGCLNVHGSLLPRWRGAAPI 123
Query: 64 SLKLNGKYHKIANETHKLLNKIEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ + N ++ ++ M++ LP +T L ++L L++ +
Sbjct: 124 QRAITVGDTQTGNTIMQMEAGLDTGPMLLSEALPIGDSETGGQLHDRLAAQGARLLVTVL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+E+ + +P+ + +YA + K EA LD+ L + + ++ AFNP+P A ++
Sbjct: 184 DDLEHYLANATAQPEDGV--TYAHKLSKQEARLDFRLPTRALYNRVRAFNPWPVA---WL 238
Query: 181 SYQNKKKFLKIWKA--HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ +++W+A L + +PGT+L V+ +G+ V G V+ L LQ K+
Sbjct: 239 PLNGQP--MRVWQASESPLPGQPDDEPGTLLQVD-DSGLHVATGDGVLCLETLQLPGKRA 295
Query: 239 ISATEFING 247
++ E G
Sbjct: 296 MTVAEVRRG 304
>gi|384265155|ref|YP_005420862.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380498508|emb|CCG49546.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 317
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 132/312 (42%), Gaps = 69/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK A +H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLF---- 131
T +T+ +EKL +I I ++E D T KL
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSIAGAKLLSETV 181
Query: 132 -------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
KP Q +YAP IK+ + +DW+ + I +I NP+P A T
Sbjct: 182 PNVISGNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYTTL--- 238
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISA 241
+ +K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++
Sbjct: 239 --NGQTIKVWASEKVAAKTEAAPGTVIRTE-QNGIVVASGNSTALLITELQPAGKKRMKG 295
Query: 242 TEFINGCIKNIK 253
+F+ G KN++
Sbjct: 296 EDFVRG--KNVQ 305
>gi|51892482|ref|YP_075173.1| 10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase
[Symbiobacterium thermophilum IAM 14863]
gi|73919421|sp|Q67PR4.1|FMT_SYMTH RecName: Full=Methionyl-tRNA formyltransferase
gi|51856171|dbj|BAD40329.1| 10-Formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase
[Symbiobacterium thermophilum IAM 14863]
Length = 326
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY-DMTKLFFKPQSNIGESYAPLIKKNEAVL 153
I P+ T L ++L ++ L+++T++++E D ++ PQ G +YA ++ + V+
Sbjct: 156 IGPDTTGGELHDELARVGAELLLETVRRVEAGDAPRI---PQPAEGVTYAAKLEPADEVI 212
Query: 154 DWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALS-IESTKKPGTILNVN 212
DW+ A+ + +I A NP+PGA T + LKIW+A + E +PGT++ +
Sbjct: 213 DWARPAEELYNQIRALNPWPGAYT-----NGPRGRLKIWRASVVPNPEPGAEPGTVVALV 267
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G V G + + E+Q + K ++ A F+NG
Sbjct: 268 RREGFTVAAGDGALLVREVQPHGKARMDAQSFVNG 302
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+F GT AA L L + + +V ++T+PD +GRG KL SPVK+ AL H + +
Sbjct: 2 LKILFMGTPEFAAVSLRALLEAGYPVVGVVTQPDKPAGRGGKLRPSPVKEVALAHGLPVF 61
Query: 61 QPISLK 66
QP L+
Sbjct: 62 QPRRLR 67
>gi|307288888|ref|ZP_07568861.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0109]
gi|422704094|ref|ZP_16761909.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1302]
gi|306500160|gb|EFM69504.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0109]
gi|315164415|gb|EFU08432.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1302]
Length = 313
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + ++ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDVIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|344339701|ref|ZP_08770629.1| Methionyl-tRNA formyltransferase [Thiocapsa marina 5811]
gi|343800437|gb|EGV18383.1| Methionyl-tRNA formyltransferase [Thiocapsa marina 5811]
Length = 321
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT L ++L L +ID + I L +PQ+ +YA + K+EA++D
Sbjct: 167 IGPRDTGADLHDRLAALGAGALIDALPGIAD--GSLMPEPQAEDRVTYAHKLTKDEAIID 224
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-KPGTILNVNF 213
W A+ I R I A+NP+P A+T + L+IW A + +T+ PGT++
Sbjct: 225 WHQPAEHIGRMIRAYNPWPVAQTRL-----DAETLRIWSAEIDAERATQAAPGTVIGAG- 278
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+GI V G+ +++++ LQ K+ ++A +F+N
Sbjct: 279 KSGIEVAAGRGIVRIVRLQPPGKRAMAAVDFLN 311
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 1 MKIIFAGTS----ISAAAILDTLYNSEH----NIVLILTKPDLHSGRGMKLNFSPVKKYA 52
++IIFAGT S AA+LD + +V + T+PD +GRG +L SPVK A
Sbjct: 4 LRIIFAGTPDFAVPSLAALLDAPADRAQMPPLEVVAVYTQPDRPAGRGRQLQASPVKALA 63
Query: 53 LKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
L + ++QP SLK + + L E D+M+V+
Sbjct: 64 LTRGLPVVQPESLKKD-------PDAVARLAAFEADLMVVV 97
>gi|227517270|ref|ZP_03947319.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0104]
gi|422736051|ref|ZP_16792316.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1341]
gi|424677376|ref|ZP_18114228.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV103]
gi|424681010|ref|ZP_18117806.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV116]
gi|424685259|ref|ZP_18121959.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV129]
gi|424688621|ref|ZP_18125226.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV25]
gi|424690595|ref|ZP_18127127.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV31]
gi|424694331|ref|ZP_18130734.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV37]
gi|424697941|ref|ZP_18134253.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV41]
gi|424701495|ref|ZP_18137667.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV62]
gi|424704553|ref|ZP_18140648.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV63]
gi|424711681|ref|ZP_18143893.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV65]
gi|424716460|ref|ZP_18145771.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV68]
gi|424721976|ref|ZP_18151043.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV72]
gi|424724706|ref|ZP_18153644.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV73]
gi|424727586|ref|ZP_18156215.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV81]
gi|424744473|ref|ZP_18172767.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV85]
gi|424753884|ref|ZP_18181813.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV93]
gi|424759067|ref|ZP_18186740.1| methionyl-tRNA formyltransferase [Enterococcus faecalis R508]
gi|227075277|gb|EEI13240.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0104]
gi|315167223|gb|EFU11240.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1341]
gi|402352397|gb|EJU87248.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV116]
gi|402354669|gb|EJU89472.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV103]
gi|402359240|gb|EJU93882.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV129]
gi|402360080|gb|EJU94689.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV25]
gi|402363793|gb|EJU98251.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV31]
gi|402370987|gb|EJV05166.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV37]
gi|402371526|gb|EJV05683.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV62]
gi|402374177|gb|EJV08213.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV41]
gi|402381575|gb|EJV15278.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV63]
gi|402383113|gb|EJV16730.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV65]
gi|402387977|gb|EJV21429.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV68]
gi|402389890|gb|EJV23265.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV72]
gi|402394126|gb|EJV27322.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV73]
gi|402396201|gb|EJV29272.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV81]
gi|402398873|gb|EJV31786.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV85]
gi|402403410|gb|EJV36084.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ERV93]
gi|402405243|gb|EJV37841.1| methionyl-tRNA formyltransferase [Enterococcus faecalis R508]
Length = 313
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + ++ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDVIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKALWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|292493780|ref|YP_003529219.1| methionyl-tRNA formyltransferase [Nitrosococcus halophilus Nc4]
gi|291582375|gb|ADE16832.1| methionyl-tRNA formyltransferase [Nitrosococcus halophilus Nc4]
Length = 322
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 16/172 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKI-EYDMTKLFFKPQ 135
+T +L+ + + + P+DT+ T+ ++L +L ++ + I E T Q
Sbjct: 147 DTGPVLHTVRYPLQ------PDDTAATVHDRLAELGAEALLQCLPAIAEGTATPTL---Q 197
Query: 136 SNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH 195
YAP I K EA LDWS A + R++ AFNP+P A+T Q K + L++W A
Sbjct: 198 DENQACYAPKIHKEEAWLDWSQPATFLERQVRAFNPWPVAQT-----QIKDQILRVWSAT 252
Query: 196 ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
AL+ E+ PGT+L N GI V GK V++LL++Q K+ ++ ++N
Sbjct: 253 ALATETAASPGTLLAAN-KTGIDVATGKGVLRLLKVQPAGKRAMAVQAYLNA 303
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA +L L +E++I + T+PD SGRG +L SPVK A H + +
Sbjct: 5 LQIVFAGTPEFAAVVLRRLVETEYSIKAVYTQPDRPSGRGRQLTPSPVKAIATAHQLPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL 96
QP SLK ++A L+ + + +++ +L
Sbjct: 65 QPSSLKDKTSQAQLAALAPDLMVVVAYGLLLPTAVL 100
>gi|260221952|emb|CBA31030.1| Methionyl-tRNA formyltransferase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 342
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT A L L+ + H I L++++PD +GRGMKL S VK++AL+HSI +
Sbjct: 8 LRIIFAGTPEFARLALAELHAAGHTIALVMSQPDRPAGRGMKLQASAVKQFALEHSIPVA 67
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GK+ + A + + + D+M+V ILP+
Sbjct: 68 QPRSLRLDGKFPEDAVAARQAIADAQADVMVVAAYGLILPQ 108
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DT+ TL +K+ + +I+ T+ + +P + +YA I+K EA +
Sbjct: 179 IAADDTTATLHDKVAGMGARMIVQTLGLASQGALQPRRQPDEGV--TYAHKIEKEEAPIR 236
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS A +I+R+I AFNPFPGA + + LK+W A + ++++ G I+ V
Sbjct: 237 WSDDASSIVRRIRAFNPFPGATAVM-----QGETLKVWGAKVGNGVASEEYGRIVAVA-P 290
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI V +++ + ELQ+ K+++ ++F+ G
Sbjct: 291 GGIAVAAMNSIVIITELQRPGGKRMAVSDFLRG 323
>gi|359438232|ref|ZP_09228268.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. BSi20311]
gi|358027071|dbj|GAA64517.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. BSi20311]
Length = 317
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
+TS +L KL +L +I+TI ++ ++ +PQ++ +YA + K+EA +DWS+
Sbjct: 163 ETSASLYTKLAELGPDALINTINRLAK--GEITPEPQNDADANYAKKLSKDEANIDWSMD 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ I R I AFNP+P T Q +KI++A+ +E + GT+L + NGI+
Sbjct: 221 AEQIERNIRAFNPWPVCFT-----QMSGNTVKIYQANV--VEQSGAAGTVLTSD-KNGIV 272
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CGK+ + + ELQ KK ++ +F+NG
Sbjct: 273 VACGKHALSISELQPQGKKPMAINDFLNG 301
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L NSEH IV + ++PD +GRG KL S VK AL+H + +
Sbjct: 5 LRIIFAGTPDFAARHLQALINSEHQIVGVYSQPDRPAGRGKKLKASEVKALALEHDLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK +E + LN + DIMIV+ ILP
Sbjct: 65 QPQSLK--------TDEALEELNSLNADIMIVVAYGLILP 96
>gi|334125892|ref|ZP_08499876.1| methionyl-tRNA formyltransferase [Enterobacter hormaechei ATCC
49162]
gi|333386292|gb|EGK57509.1| methionyl-tRNA formyltransferase [Enterobacter hormaechei ATCC
49162]
Length = 315
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL L +I+T++++ + K + ++++ +YA + K EA +D
Sbjct: 159 ITSEDTSATLYDKLADLGPQGLIETLQQLADNTAKPEVQDEAHV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ ++ +K+WKA ++ ++ +P TI++ +
Sbjct: 217 WSLSAAQLERCIRAFNPWP------MSWLMIDEQPVKVWKASVINGNTSAEPSTIIDAS- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
NGI V G+ ++ L LQ KK +SA + +N ++FI
Sbjct: 270 KNGIQVATGEGILNLESLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H IV + T+PD +GRG KL PVK A H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGKKLMPGPVKVLAETHGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPASLR--------PQENQQLVADLNADVMVVVAYGLILP 96
>gi|56419707|ref|YP_147025.1| methionyl-tRNA formyltransferase [Geobacillus kaustophilus HTA426]
gi|73919394|sp|Q5L0S3.1|FMT_GEOKA RecName: Full=Methionyl-tRNA formyltransferase
gi|56379549|dbj|BAD75457.1| methionyl-tRNA formyltransferase [Geobacillus kaustophilus HTA426]
Length = 319
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 67/306 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT A IL L + +++ ++T+PD GR + PVK A + I ++QP
Sbjct: 4 IVFMGTPDFAVPILRQLLDDGYHVAAVVTQPDKPKGRKREPVPPPVKVEAERRGIPVLQP 63
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y ++ L+ F I + +LPE
Sbjct: 64 TKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGGAPIHY 123
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKLFFK-------- 133
T +T+ +E+L I DT+ + ++ K
Sbjct: 124 AIWQGKTKTGVTIMYMVERLDAGDMLAQVEVPIAETDTVGTLHDKLSAAGAKLLSETLPL 183
Query: 134 ---------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
PQ +YAP I++ + +DW+ + I I AF+P+P ++Y
Sbjct: 184 LLEGNIAPVPQDEEKATYAPNIRREQERIDWTQPGEAIYNHIRAFHPWP------VTYTT 237
Query: 185 KKKFL-KIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISAT 242
+ + K+W + + PGTIL + NGI+V G + I++ ELQ KK+++
Sbjct: 238 QDGHIWKVWWGEKVPAPRSAPPGTILALE-ENGIVVATGNETAIRITELQPAGKKRMAVG 296
Query: 243 EFINGC 248
EF+ G
Sbjct: 297 EFLRGA 302
>gi|418054119|ref|ZP_12692175.1| Methionyl-tRNA formyltransferase [Hyphomicrobium denitrificans
1NES1]
gi|353211744|gb|EHB77144.1| Methionyl-tRNA formyltransferase [Hyphomicrobium denitrificans
1NES1]
Length = 310
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 69/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ I+F GT A +LD + + H IV + ++P +GRG+ SPV + A I +
Sbjct: 3 LDIVFMGTPDFAVPVLDAVAAAGHRIVAVYSQPPRPAGRGLSEVKSPVHRRAEALGIPVR 62
Query: 61 QPISLKLNGKYHKIA--------------------------------------------- 75
P + K + + A
Sbjct: 63 TPKNFKADTDRAEFAALNADAAVVVAYGLLLPATVLDAPRFGCFNVHASKLPRWRGAAPI 122
Query: 76 ------NETHKLLNKIEFDIMIVMGIL------PEDTSLT---LQNKLEKLSKILIIDTI 120
+T +N + D + G + P T +T L +KL L L++D +
Sbjct: 123 QRAIMAGDTVTAVNIMRMDAGLDTGPVCLGRDMPISTDMTAGELHDKLSALGAELMVDAL 182
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++E K +PQ + +YA I K E +D++ A I+ I +PFPGA +
Sbjct: 183 AQLEAGTLKAMPQPQEGV--TYAAKIDKRETRIDFAKPAHEIVNHIRGLSPFPGA-WFEA 239
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+ + +K+ +A A+S +PG +L+ + V CG+ I++ ELQ+ K+ +
Sbjct: 240 NLSGNPERIKVLRASAVS--KNGEPGVLLDSE----LTVACGEGAIRIEELQRAGKQPMK 293
Query: 241 ATEFINGC 248
A +F+ G
Sbjct: 294 AADFLRGA 301
>gi|313672041|ref|YP_004050152.1| methionyl-tRNA formyltransferase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312938797|gb|ADR17989.1| methionyl-tRNA formyltransferase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 307
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 115/213 (53%), Gaps = 17/213 (7%)
Query: 45 FSPVK-KYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGILP---EDT 100
F+P+ ++L + P++ + + T K+ ++ +++M +P +DT
Sbjct: 102 FAPINVHFSLLPKYRGAAPVNWAIINGEKETGVATMKMDEGLDTGDILLMKSIPIEKDDT 161
Query: 101 SLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAK 160
++TL KL KL L+I+T+K +++T PQ + +YAP+IKK + +D++ +A+
Sbjct: 162 TITLSEKLSKLGADLLIETLKNY-HNITP---TPQDHASYTYAPIIKKEDGKIDFTKNAE 217
Query: 161 TIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVV 220
I R I F P+P A +Y K K +K +KA +++ KPG ++ V+ + LV
Sbjct: 218 VIERMIRGFQPWPTAYCFY-----KGKMVKFFKAEV--VKANGKPGEVVGVD-KSSFLVA 269
Query: 221 CGKNV-IKLLELQKNNKKKISATEFINGCIKNI 252
CG++ +++LELQ K ++ A F+ G N+
Sbjct: 270 CGEDSGLRILELQMEGKNRVDAKSFLTGNTINV 302
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++F GT A LD + + L++ +PD GRG KL SPVK++AL H++++
Sbjct: 1 MKLVFMGTPEMAVPTLDMILKEGFEVPLVVCQPDKPKGRGNKLQPSPVKEFALDHNLEVF 60
Query: 61 QPISLKLN 68
QP +K N
Sbjct: 61 QPEKIKNN 68
>gi|357040452|ref|ZP_09102239.1| Methionyl-tRNA formyltransferase [Desulfotomaculum gibsoniae DSM
7213]
gi|355356543|gb|EHG04329.1| Methionyl-tRNA formyltransferase [Desulfotomaculum gibsoniae DSM
7213]
Length = 325
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT + ++L L L+++ ++ ++ + + PQ + SYAP++ +++ ++
Sbjct: 155 IGPDDTVGIVHDRLAMLGGQLLLEVLEIMKTGLPQPV--PQDDSRFSYAPMLTRDDEIVR 212
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALS--IESTKKPGTILNVN 212
W A TI +I NP+PGA+TY K LKIW+ + +PG +L
Sbjct: 213 WERDASTIKNQIRGLNPWPGARTYL-----GDKLLKIWQVSLIRDYPAVAAEPGLVLKAC 267
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GILV G ++ + ELQ KK+++A +F+ G
Sbjct: 268 GDRGILVQTGDGILSIDELQLQGKKRMTAADFLRG 302
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT A L L + +++V ++T+PD GRG K+ SPVK AL + +
Sbjct: 1 MRVIFMGTPDFAVPSLRILLQNNYDVVAVVTQPDKPGGRGKKMRPSPVKAAALAAGLAVY 60
Query: 61 QP 62
QP
Sbjct: 61 QP 62
>gi|319935465|ref|ZP_08009901.1| methionyl-tRNA formyltransferase [Coprobacillus sp. 29_1]
gi|319809564|gb|EFW05978.1| methionyl-tRNA formyltransferase [Coprobacillus sp. 29_1]
Length = 317
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 72/310 (23%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT+ + AIL L++ +N+V ++++PD + GR L VK ALKH + +IQ
Sbjct: 5 RIVFMGTASFSLAILKMLFDENYNVVGVVSQPDRYVGRKKILTMPDVKVEALKHDVPVIQ 64
Query: 62 PISLK--------------LNGKYHKIANET--------------------------HK- 80
P ++ + Y ++ +T H+
Sbjct: 65 PQKIREDYQAILDLKPDLIITAAYGQLVPQTVLDAPTLGCINVHASLLPMYRGGAPVHQC 124
Query: 81 --------------LLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKI---LIIDTIKKI 123
++ K++ +I + P T+ + E+LS++ L+ DT+ I
Sbjct: 125 IIDGQDQTGVTIMYMVKKMDAGNIISQQVTPIHIEDTVGDLYERLSEVGAQLLKDTLPSI 184
Query: 124 EYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
+ PQ +YAP + + + +DW+L A + K+ NP+PG+ Y +YQ
Sbjct: 185 LEGTNQSL--PQDESLVTYAPTLSREDERIDWNLGALQVYNKVRGTNPWPGS---YTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKP------GTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
K +KIW E+ +K GTI+ + F + I V V + E Q KK
Sbjct: 240 G--KVVKIWAGQVHQCENARKHHVHQDNGTIVKI-FKDAIGVKVCDGVYLITEFQLEGKK 296
Query: 238 KISATEFING 247
K+ +++NG
Sbjct: 297 KMFVKDYLNG 306
>gi|227883419|ref|ZP_04001224.1| methionyl-tRNA formyltransferase [Escherichia coli 83972]
gi|301046058|ref|ZP_07193237.1| methionyl-tRNA formyltransferase [Escherichia coli MS 185-1]
gi|227839563|gb|EEJ50029.1| methionyl-tRNA formyltransferase [Escherichia coli 83972]
gi|300301943|gb|EFJ58328.1| methionyl-tRNA formyltransferase [Escherichia coli MS 185-1]
Length = 268
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 112 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL N
Sbjct: 170 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTTTKAAPGTILEAN-K 223
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL +Q KK +S + +N
Sbjct: 224 QGIQVATGDGILNLLSMQPAGKKAMSVQDLLN 255
>gi|157148862|ref|YP_001456181.1| hypothetical protein CKO_04700 [Citrobacter koseri ATCC BAA-895]
gi|157086067|gb|ABV15745.1| hypothetical protein CKO_04700 [Citrobacter koseri ATCC BAA-895]
Length = 268
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 13/159 (8%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS TL +KL L +I+T+K++E K Q N ++A + K EA +DWSLS
Sbjct: 116 DTSGTLYDKLADLGPQGLIETLKQLENGTAKPEV--QDNALATHAEKLSKEEARMDWSLS 173
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R I AFNP+P +S+ + +K+W+A + + +PGTIL+ GI
Sbjct: 174 AAQLERCIRAFNPWP------MSWMEIDGQPVKVWQASVIERVTQAEPGTILDAT-KQGI 226
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
V G ++ LL LQ KK +SA + +N ++FI
Sbjct: 227 QVATGNGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 262
>gi|121596337|ref|YP_988233.1| methionyl-tRNA formyltransferase [Acidovorax sp. JS42]
gi|166214868|sp|A1WD32.1|FMT_ACISJ RecName: Full=Methionyl-tRNA formyltransferase
gi|120608417|gb|ABM44157.1| methionyl-tRNA formyltransferase [Acidovorax sp. JS42]
Length = 323
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ TL ++L +L LI++ ++ K PQ G +YA I K E+ +D
Sbjct: 163 ISPADTTATLHDRLAQLGGRLIVEALEMAACGGLK--PTPQPAEGVTYAHKIDKAESTID 220
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIEST--KKPGTILNVN 212
W+ A+ I R++ AF+PFPGA T +K+W S T G IL+++
Sbjct: 221 WNQPAEVIARRVRAFDPFPGAATTL-----GADAIKVWSCEIDSCSRTLDAACGQILSID 275
Query: 213 FHNGILVVCGK-NVIKLLELQKNNKKKISATEFING 247
+GI V CG ++++L LQ+ K++ A +F+ G
Sbjct: 276 -ADGIGVACGAGSLLRLTVLQRAGGKRLPAADFLRG 310
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MRVIFAGTPEFARVALERLLAAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALQHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L+GKY + A + + D+M+V ILP+
Sbjct: 61 QPLSLRLDGKYPEDAAAAKAAIEAAQADVMVVAAYGLILPQ 101
>gi|256761052|ref|ZP_05501632.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T3]
gi|256682303|gb|EEU21998.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T3]
Length = 314
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 4 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 63
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 64 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 123
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 124 YSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLP 183
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 184 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 240
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 241 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKVLWIACGEGTVLQIDRLQPAGKGQLTIQ 297
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 298 EFLNGVGQNV 307
>gi|99082417|ref|YP_614571.1| methionyl-tRNA formyltransferase [Ruegeria sp. TM1040]
gi|123077454|sp|Q1GDF7.1|FMT_SILST RecName: Full=Methionyl-tRNA formyltransferase
gi|99038697|gb|ABF65309.1| methionyl-tRNA formyltransferase [Ruegeria sp. TM1040]
Length = 308
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 75/307 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYA------LK 54
M++IF GT + +LD L + H I + +P +GRG K +PV A ++
Sbjct: 1 MRVIFMGTPEFSVPVLDALVEAGHEIAAVYCQPPRPAGRGKKDRPTPVHARAEALGLEVR 60
Query: 55 HSIKI-------------------------------IQPISLKLN------------GKY 71
H + + P + LN
Sbjct: 61 HPVSLKGSEEQQAFAALNADVAVVVAYGLILPQAVLDAPRAGCLNIHASLLPRWRGAAPI 120
Query: 72 HK--IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
H+ +A +TH + ++ + + G I E+T+ L ++L + +I+D +
Sbjct: 121 HRAIMAGDTHTGICIMQMEAGLDTGPVLLRKETEIGGEETTAALHDRLSLMGARMIVDAL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ L +PQ G +YA I K EA +DWS++A+ + RKI +PFPGA
Sbjct: 181 AT----LPDLKAEPQPEAGVTYASKIDKAEAQIDWSVAAEEVDRKIRGLSPFPGA----- 231
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ + LK+ + E T GT+L+ + + V CG ++LL LQ+ K
Sbjct: 232 WFEVDGQRLKVLASRL--AEGTGAVGTVLD----DKLTVACGSGAVELLRLQRAGKAAQD 285
Query: 241 ATEFING 247
F+ G
Sbjct: 286 REVFLRG 292
>gi|222112561|ref|YP_002554825.1| methionyl-tRNA formyltransferase [Acidovorax ebreus TPSY]
gi|254789351|sp|B9MI87.1|FMT_DIAST RecName: Full=Methionyl-tRNA formyltransferase
gi|221732005|gb|ACM34825.1| methionyl-tRNA formyltransferase [Acidovorax ebreus TPSY]
Length = 323
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ TL ++L +L LI++ ++ K PQ G +YA I K E+ +D
Sbjct: 163 ISPADTTATLHDRLAQLGGRLIVEALEMAACGGLK--PTPQPAEGVTYAHKIDKAESTID 220
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIEST--KKPGTILNVN 212
W+ A+ I R++ AF+PFPGA T +K+W S T G IL+++
Sbjct: 221 WNQPAEVIARRVRAFDPFPGAATTL-----GADAIKVWSCEIDSCSRTLDAACGQILSID 275
Query: 213 FHNGILVVCGK-NVIKLLELQKNNKKKISATEFING 247
+GI V CG ++++L LQ+ K++ A +F+ G
Sbjct: 276 -ADGIGVACGAGSLLRLTVLQRAGGKRLPAADFLRG 310
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK+ AL+H I +
Sbjct: 1 MRVIFAGTPEFARVALERLLTAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALQHGIAVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L+GKY + A + + D+M+V ILP+
Sbjct: 61 QPLSLRLDGKYPEDAAAAKAAIEAAQADVMVVAAYGLILPQ 101
>gi|422017026|ref|ZP_16363599.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Providencia burhodogranariea DSM
19968]
gi|414091195|gb|EKT52886.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Providencia burhodogranariea DSM
19968]
Length = 315
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I+PEDTS T+ KL + +I TI I + + Q + +YA + K+EA ++
Sbjct: 159 IMPEDTSATIYEKLALVGPEALIHTIDLISNQ--ECIAEKQDDTLANYAEKLSKDEARIN 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W SA+ I R AFNP+P +Y+I +++ +K+W+A +S + +KPGTI++ +
Sbjct: 217 WQQSAEQIERCTRAFNPWP--MSYFIV---QEQLIKVWQAKVISEDHNEKPGTIISAD-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
NGI V G V+ + +LQ KK + A + +N
Sbjct: 271 NGICVATGNGVLNITQLQPPGKKAMGAQDLLN 302
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA L L ++H +V +LT PD +GRG KL SPVK A ++ I I
Sbjct: 5 LKIIFAGTPDFAAGHLAALLKTKHQVVGVLTPPDKPAGRGKKLTPSPVKVLAQENQIPIF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP +LK E+H+ + D+MIV+ ILP
Sbjct: 65 QPTTLK--------NEESHQWIKDQNADLMIVVAYGFILP 96
>gi|345021919|ref|ZP_08785532.1| methionyl-tRNA formyltransferase [Ornithinibacillus scapharcae
TW25]
Length = 313
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 133/310 (42%), Gaps = 64/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + IL L SE+ +VL++T+PD GR + PVK A H I + Q
Sbjct: 3 RIVFMGTPDFSVPILHKLVESEYEVVLVVTQPDRPKGRKKVITPPPVKVAAESHGIPVYQ 62
Query: 62 PISLK---------------------------LNGKYHKIANETHKLLNKIEFDIMIVMG 94
P ++ L+G + N LL ++ I
Sbjct: 63 PEKIRNNFQEILDYNPDIIVTAAYGQILPKDLLDGPKYGCINVHASLLPELRGGAPIHYA 122
Query: 95 ILP--EDTSLTLQNKLEKL--SKILIIDTIKKIEYD---------------------MTK 129
I+ E+T +T+ EKL IL +I IE D + +
Sbjct: 123 IIQGKEETGITIMYMAEKLDAGDILTQKSIP-IEIDDHVGSMHDKLSQIGSELLMETLPR 181
Query: 130 LF---FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
LF P Q + ++A IK+ + ++DW+ +K I +I +P+P A + +YQ
Sbjct: 182 LFAGEITPIKQDDSKATFAANIKREQELIDWNRPSKQIYNQIRGLHPWPVA---FTTYQG 238
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISATE 243
+K+W A + + KPG ++ ++VVCG + ++L E+Q KK+++ E
Sbjct: 239 NN--MKVWWAELTNKQFDGKPGEVVEKEQDEAVIVVCGDKLGLRLTEIQPAGKKRMTVRE 296
Query: 244 FINGCIKNIK 253
++ G I+
Sbjct: 297 YLQGSSDRIQ 306
>gi|383936054|ref|ZP_09989484.1| methionyl-tRNA formyltransferase [Rheinheimera nanhaiensis E407-8]
gi|383702810|dbj|GAB59575.1| methionyl-tRNA formyltransferase [Rheinheimera nanhaiensis E407-8]
Length = 318
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DTS +L +KL +L ++D + ++ Q N +YA + K+EA+L++S
Sbjct: 162 DDTSTSLYDKLAQLGPKALLDALSQLPQLQQAAIA--QDNQLATYAEKLHKDEALLNFSK 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AFNP+P Y+S + +K+W+AH+LS +S K GT+L+ + NGI
Sbjct: 220 DAAALAREVRAFNPWP---VSYLSL--PQGNIKVWQAHSLSSQSGKAAGTVLSAD-KNGI 273
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ C + + +LQ KK ++ +F+NG
Sbjct: 274 AIACTDGIFVITQLQPPGKKPMAVADFLNG 303
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L ++ H +V + T+PD +GRG +L S VK+ AL+H + +
Sbjct: 5 LRIIFAGTPDFAARHLQALLDANHQVVAVYTQPDRPAGRGQQLQPSAVKQLALQHQLPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SLK ++A+ + D+MIV+ ILP+
Sbjct: 65 QPKSLKKPAAQAELAS--------LNADLMIVVAYGLILPQ 97
>gi|229548021|ref|ZP_04436746.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 29200]
gi|257091365|ref|ZP_05585726.1| methionyl-tRNA formyltransferase [Enterococcus faecalis CH188]
gi|257417250|ref|ZP_05594244.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ARO1/DG]
gi|312905429|ref|ZP_07764543.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0635]
gi|422689949|ref|ZP_16748039.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0630]
gi|422732806|ref|ZP_16789135.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0645]
gi|229306897|gb|EEN72893.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 29200]
gi|257000177|gb|EEU86697.1| methionyl-tRNA formyltransferase [Enterococcus faecalis CH188]
gi|257159078|gb|EEU89038.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ARO1/DG]
gi|310631158|gb|EFQ14441.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0635]
gi|315161201|gb|EFU05218.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0645]
gi|315577117|gb|EFU89308.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0630]
Length = 313
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL++L + +++ ++T+PD GR + +PVK+ ALKH++ ++Q
Sbjct: 3 KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + K+ + L+ F + IL P+ ++ + L
Sbjct: 63 PEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ +KK++ D+ +F K
Sbjct: 123 YSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A+ I ++ P+P T + +YQ
Sbjct: 183 KLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP---TAFTTYQ 239
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
KIW L+ +T PGTI+ + + + CG+ V+++ LQ K +++
Sbjct: 240 GTN--WKIWAVTPLTETTTSAPGTIIQRS-KKVLWIACGEGTVLQIDRLQPAGKGQLTIQ 296
Query: 243 EFINGCIKNI 252
EF+NG +N+
Sbjct: 297 EFLNGVGQNV 306
>gi|386398888|ref|ZP_10083666.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739514|gb|EIG59710.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. WSM1253]
Length = 311
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 13/150 (8%)
Query: 100 TSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSA 159
T+L L ++L +L L++ + + D L K QS G +YA I K EA +DW+ A
Sbjct: 163 TALDLHDRLSRLGADLMVRAMAAL--DRGGLQLKKQSEDGVTYAAKIDKAEARIDWTRPA 220
Query: 160 KTIMRKINAFNPFPGAKTYY--ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
+ ++R I+ +PFPGA T +S + K L+ A + + PG +L+ + +
Sbjct: 221 REVLRHIHGLSPFPGAWTELTGVSENARVKILRCELA-----KGSGTPGEVLD----DHL 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ CG+ I+L+ELQ+ K ++ A +F+ G
Sbjct: 272 TIACGEGAIRLIELQREGKARMQAADFLRG 301
>gi|110678660|ref|YP_681667.1| methionyl-tRNA formyltransferase [Roseobacter denitrificans OCh
114]
gi|122972952|sp|Q16AL2.1|FMT_ROSDO RecName: Full=Methionyl-tRNA formyltransferase
gi|109454776|gb|ABG30981.1| methionyl-tRNA formyltransferase, putative [Roseobacter
denitrificans OCh 114]
Length = 305
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 15/153 (9%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PE+T+ L ++L L LI+DT+ +++ +L PQ G +YA I K EA +D
Sbjct: 155 IGPEETTAQLHDRLSALGAALIVDTLARLD----QLEAVPQPEDGVTYAAKIDKAEAQVD 210
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A+ + R I +PFPGA T + K +I E++ PGT+
Sbjct: 211 WDQPAEDVDRLIRGLSPFPGAWTLLGDTRVKLLGSRI-------AEASGVPGTV----RL 259
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
N + VVCG ++L ++Q+ K SA +F+NG
Sbjct: 260 NPLRVVCGTGAVELTQVQRAGKAVQSAADFLNG 292
>gi|52080176|ref|YP_078967.1| methionyl-tRNA formyltransferase Fmt [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|319646044|ref|ZP_08000274.1| methionyl-tRNA formyltransferase [Bacillus sp. BT1B_CT2]
gi|404489064|ref|YP_006713170.1| methionyl-tRNA formyltransferase Fmt [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|423682118|ref|ZP_17656957.1| methionyl-tRNA formyltransferase Fmt [Bacillus licheniformis WX-02]
gi|73919376|sp|Q65JS5.1|FMT_BACLD RecName: Full=Methionyl-tRNA formyltransferase
gi|52003387|gb|AAU23329.1| methionyl-tRNA formyltransferase Fmt [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52348055|gb|AAU40689.1| methionyl-tRNA formyltransferase Fmt [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|317391794|gb|EFV72591.1| methionyl-tRNA formyltransferase [Bacillus sp. BT1B_CT2]
gi|383438892|gb|EID46667.1| methionyl-tRNA formyltransferase Fmt [Bacillus licheniformis WX-02]
Length = 316
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 71/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + + +V ++T+PD GR + PVK+ AL+ I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLGTLIDDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRRGIPVLQ 62
Query: 62 PISLKLNGKYHKI-ANETH-------------KLLNKIEFDIMIV-MGILP--------- 97
P ++ + KI A E KLL+ ++ + V +LP
Sbjct: 63 PEKVREEAETDKILALEPDLIVTAAFGQILPKKLLDYPKYGCINVHASLLPELRGGAPIH 122
Query: 98 -------EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTK--------------------- 129
E T +T+ +EKL D + K+E D+ +
Sbjct: 123 YAILEGKEKTGVTIMYMVEKLD---AGDMLAKVEVDIEETDNVGTLHDKLSKAGAALLSE 179
Query: 130 ---------LFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + Q +YAP IK+ + ++DWS + + ++ NP+P A T
Sbjct: 180 TVPRIIDGSVTPEKQDEQKATYAPNIKREQELIDWSKPGEVLYNQVRGLNPWPVAYTVL- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKI 239
+ LK+W A +PG I+ V +GI+V G + +KL E+Q KK++
Sbjct: 239 ----NGQTLKVWAAKKCQALKQAEPGEIVTVE-KDGIVVATGNDTALKLTEVQPAGKKRM 293
Query: 240 SATEFINGC 248
A +F+ G
Sbjct: 294 KAEDFVRGA 302
>gi|25028275|ref|NP_738329.1| methionyl-tRNA formyltransferase [Corynebacterium efficiens YS-314]
gi|259507333|ref|ZP_05750233.1| methionyl-tRNA formyltransferase [Corynebacterium efficiens YS-314]
gi|33516870|sp|Q8FT52.1|FMT_COREF RecName: Full=Methionyl-tRNA formyltransferase
gi|23493559|dbj|BAC18529.1| putative methionyl-tRNA formyltransferase [Corynebacterium
efficiens YS-314]
gi|259165044|gb|EEW49598.1| methionyl-tRNA formyltransferase [Corynebacterium efficiens YS-314]
Length = 315
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 125/309 (40%), Gaps = 66/309 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A L L +SEH +V +LT+PD GRG L+ S V + A H I++I
Sbjct: 1 MRLVFAGTPEPAVVALQKLIDSEHEVVAVLTQPDARRGRGRTLHPSAVAELAQAHGIEVI 60
Query: 61 QPISLKL---NGK--YHKIANETHKLLNKIEFDIMIV----------------------M 93
+P SLK +G+ ++A L + F +I
Sbjct: 61 KPTSLKADTGDGRLVRQRLAELQPDCLPVVAFGQLITRDLLDVAPHGWVNLHFSLLPAWR 120
Query: 94 GILPEDTSLTLQNKL---------EKLSKILIIDTIK--------------KIEYDMTKL 130
G P ++ ++L E L +I+ T++ ++ Y L
Sbjct: 121 GAAPVQAAIRAGDQLTGATCFRIDEGLDTGVILSTLEETIQPTDTADDLLTRLAYAGADL 180
Query: 131 F-----------FKPQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
P+ GE+ YAP I +A +DW++ A+ I R I A P PGA +
Sbjct: 181 LVDTMTGLEAGTISPREQTGEATYAPKITTVDARIDWTVPAEVIDRHIRAHTPGPGA--W 238
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ + K + L T PG + + + V G + L ++Q KK
Sbjct: 239 TMLDDARLKVGPLVTVTDLPDVPTLNPGALHATR--DAVYVGTGSTPVALGQIQPPGKKM 296
Query: 239 ISATEFING 247
++A ++ G
Sbjct: 297 MNAADWARG 305
>gi|406947235|gb|EKD78196.1| Methionyl-tRNA formyltransferase, partial [uncultured bacterium]
Length = 270
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 12/162 (7%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
+TS LQ++L +L L++ T+ ++ + K+ QS G + A I K+EAV+DW S
Sbjct: 117 ETSDALQDRLSQLGAALLLKTLNQLAEN--KIHATAQSAAGITIADKIDKSEAVIDWKQS 174
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNV--NFHNG 216
A I RKI AF +P A+T +++ + LKIW+A S S + PGT++ + NF +
Sbjct: 175 AIQIERKIRAFYAWPVAQTIFLN-----QPLKIWQARVSSASSNQSPGTLIAIEKNFFS- 228
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFISV 258
+ +++L +Q KK+ISA +FI G + ++ +V
Sbjct: 229 --IAAADGALEILSVQMPGKKRISAADFIRGFSRELQIHQTV 268
>gi|83951628|ref|ZP_00960360.1| methionyl-tRNA formyltransferase [Roseovarius nubinhibens ISM]
gi|83836634|gb|EAP75931.1| methionyl-tRNA formyltransferase [Roseovarius nubinhibens ISM]
Length = 302
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P +T+ L ++L + LIID + +++ +L +PQ G +YA I K EA +D
Sbjct: 155 IGPRETTGQLHDRLSVMGAELIIDALGQLD----ELTPEPQPEAGVTYAAKIDKAEARID 210
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKK-KFLKIWKAHALSIESTKKPGTILNVNF 213
W A + R I +PFPGA ++ ++ K L +A E PG +L+
Sbjct: 211 WGWRAAEVDRTIRGLSPFPGA---WVEVAGERIKLLASEQA-----EGCGAPGEVLD--- 259
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G+ V CG+ ++LL LQ+ + A EF+ G
Sbjct: 260 -DGLRVACGQGAVRLLRLQRAGRGAQDAPEFLRG 292
>gi|77359004|ref|YP_338579.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas haloplanktis
TAC125]
gi|123587109|sp|Q3IDI3.1|FMT_PSEHT RecName: Full=Methionyl-tRNA formyltransferase
gi|76873915|emb|CAI85136.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas haloplanktis
TAC125]
Length = 321
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
+TS +L KL L +IDTI + K+ +PQ++ +YA + K+EA +DWS+S
Sbjct: 163 ETSASLYTKLADLGPGALIDTINNLAN--GKITPEPQNDAAANYAKKLSKDEANIDWSMS 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKP---GTILNVNFHN 215
A I R I AFNP+P T Q + +KI++AH + +S+ +P G +L+ + N
Sbjct: 221 AAQIERNIRAFNPWPVCFT-----QMGGQPVKIYQAHVVE-QSSSQPDNNGRVLSSD-KN 273
Query: 216 GILVVCGKNVIKLLELQKNNKKKISATEFING 247
G++V CG++ + + +LQ KK ++ +F+NG
Sbjct: 274 GVIVGCGEHALCITQLQPQGKKPMAINDFLNG 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L SEH IV + ++PD +GRG KL S VK+ AL+H++ +
Sbjct: 5 LRIIFAGTPDFAARHLQALIQSEHQIVGVYSQPDRPAGRGKKLKASEVKELALEHNLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK ++ L ++ DIMIV+ ILP
Sbjct: 65 QPQSLKTEDALNE--------LTRLNADIMIVVAYGLILP 96
>gi|410610886|ref|ZP_11321991.1| methionyl-tRNA formyltransferase [Glaciecola psychrophila 170]
gi|410169597|dbj|GAC35880.1| methionyl-tRNA formyltransferase [Glaciecola psychrophila 170]
Length = 314
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 136/312 (43%), Gaps = 79/312 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT AA L L +SEH+++ + ++PD +GRG KL S VKK ALK+SI I
Sbjct: 5 LKIVFAGTPEFAALHLQALIDSEHDVIAVYSQPDRPAGRGKKLQASSVKKLALKYSIPIF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP SLK E L +++ DIMIV+ ILP
Sbjct: 65 QPQSLK--------TEEAQLDLAELQADIMIVVAYGLILPSSILGTPKLGCLNVHGSLLP 116
Query: 98 ----------------EDTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIG 139
+T +T+ E L +L ++ + D + ++ + IG
Sbjct: 117 KWRGAAPIQRSIWAGDSETGVTIMQMDEGLDTGAMLFKQSLAITKQDTSDSLYQKLAEIG 176
Query: 140 E-----------SYAPLIKKN------------EAVLDWSLSAKTIMRKINAFNPFPGAK 176
P I+ N EA ++W L A+ + R I AFNP+P A
Sbjct: 177 PKALIETLNALTKLQPQIQDNELATYAKKLSKEEAKINWDLPAEQLERNIRAFNPWPVA- 235
Query: 177 TYYISYQNKKKFLKIWKAHALSIESTKKP-GTILNVNFHNGILVVCGKNVIKLLELQKNN 235
+ I+ N +K++ + + E+ P G I++ + GILV G + L LQ
Sbjct: 236 FFSINDSN----IKVYSSDVVKNENPDIPAGQIIHAD-KKGILVTTGNQSLLLTTLQLPG 290
Query: 236 KKKISATEFING 247
KK + A + +NG
Sbjct: 291 KKPMPAADVLNG 302
>gi|343518429|ref|ZP_08755421.1| methionyl-tRNA formyltransferase [Haemophilus pittmaniae HK 85]
gi|343393717|gb|EGV06270.1| methionyl-tRNA formyltransferase [Haemophilus pittmaniae HK 85]
Length = 318
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI ++TS +L +KL +++ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDIDA------QETSASLYHKLAEIAPSALIDVLDHLEE--RKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P + Q ++ LK++ A
Sbjct: 198 DNQSNYAEKLSKEEAKLDWSLSAAQLERNIRAFNPWPISFLQLTDEQGNEQTLKVYAAGV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L K GTIL+V+ GI + + V+ LL+LQ KK +S +F+NG
Sbjct: 258 LP-HVDKPAGTILSVD-KKGIQIATAEGVLNLLQLQPAGKKPMSVQDFLNG 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HNI+ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAAQHLAALLNSHHNIIAVYTQPDKPAGRGKKLQASPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E + + D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KEEAQAEIKALNADVMVVVAYGLILPQ 96
>gi|260432737|ref|ZP_05786708.1| methionyl-tRNA formyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416565|gb|EEX09824.1| methionyl-tRNA formyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 306
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 121/310 (39%), Gaps = 81/310 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYA-------- 52
M++IF GT + +L+ L + H I + +P +GRG K +PV A
Sbjct: 1 MRVIFMGTPEFSVPVLEALVQAGHEIAAVYCQPPRPAGRGKKDRPTPVHARAEALGLPVR 60
Query: 53 ----------------LKHSIKII--------QPISLKLNGKYHKIANETHKLLNK---- 84
L+ + ++ QPI L+ H N LL +
Sbjct: 61 HPTSLKSPEEQAAFAGLQADVAVVVAYGLILPQPI---LDAPRHGCLNIHASLLPRWRGA 117
Query: 85 -----------IEFDIMIVM----------------GILPEDTSLTLQNKLEKLSKILII 117
E I I+ I PE+T+ L ++L + LI+
Sbjct: 118 APIHRAIMAGDAETGICIMQMEAGLDTGPVLLRQATPIGPEETTAQLHDRLSAMGADLIV 177
Query: 118 DTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
+ + + +L +PQ +G +YA I K EA +DWS A + R+I +PFPGA T
Sbjct: 178 QALDR----LPELTPEPQPEVGVTYAAKIDKAEARVDWSRPAVEVDRQIRGLSPFPGAWT 233
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKK 237
+ K L A LS + PG +L+ + + V CG ++LL LQ+ K
Sbjct: 234 QI--EGERVKLL----ASRLS-DGQGVPGEVLD----DALRVACGTGAVELLRLQRAGKA 282
Query: 238 KISATEFING 247
F+ G
Sbjct: 283 AQDRETFLRG 292
>gi|343496685|ref|ZP_08734777.1| methionyl-tRNA formyltransferase [Vibrio nigripulchritudo ATCC
27043]
gi|342820882|gb|EGU55689.1| methionyl-tRNA formyltransferase [Vibrio nigripulchritudo ATCC
27043]
Length = 315
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 136/314 (43%), Gaps = 82/314 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +SEH ++ + T PD +GRG KL S VK AL+H + +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAGRGKKLTPSAVKSLALEHDLPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILP 97
QP + K ++E + L + DIM+V+ ILP
Sbjct: 65 QPENFK--------SDEAKQALVDLNADIMVVVAYGMLLPQAVLDTPRLGCINVHGSILP 116
Query: 98 ----------------EDTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK------ 133
E+ +T+ L +L I T+ D + +
Sbjct: 117 RWRGAAPIQRSVWAGDEEAGVTIMQMDIGLDTGDMLKIATLPIEATDTSTSMYDKLAELG 176
Query: 134 PQS------NIGESYAPLIKKN-------------EAVLDWSLSAKTIMRKINAFNPFPG 174
PQ+ +I E A +K+N EA ++W+ A I R + AFNP+P
Sbjct: 177 PQALIDCLGDIAEGKAVPVKQNDDEASYAKKLSKEEARINWNDDAAHIERCVRAFNPWP- 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKP-GTILNVNFHNGILVVCGKNVIKLLELQK 233
+++ + N +K+W++ L ++T KP GTIL + GI V G ++ L ++Q
Sbjct: 236 -ISHFDAADNT---IKVWQSR-LDNQTTDKPAGTILQAD-KTGIYVATGNGILVLEQIQV 289
Query: 234 NNKKKISATEFING 247
KK +S + +N
Sbjct: 290 PGKKAMSVQDILNA 303
>gi|124265477|ref|YP_001019481.1| methionyl-tRNA formyltransferase [Methylibium petroleiphilum PM1]
gi|166215481|sp|A2SCF7.1|FMT_METPP RecName: Full=Methionyl-tRNA formyltransferase
gi|124258252|gb|ABM93246.1| methionyl-tRNA formyltransferase [Methylibium petroleiphilum PM1]
Length = 315
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+D++ TL ++L L LI++ ++ L +PQ G +YA I K EA +DWS
Sbjct: 166 DDSTATLHDRLSALGGRLIVEALEAAA--CGGLVRRPQPAEGVTYAHKIDKAEAAIDWSR 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A+ I R++ AF+PFPGA S+Q + +K+W+A PGT+L+ G+
Sbjct: 224 PAEEIERRVRAFDPFPGA-----SFQQAGETVKLWRAAVAPQRGA--PGTVLSAA--EGV 274
Query: 218 L-VVCGKNVIKLLELQKNNKKKISATEFI 245
L V CG + LL+LQ+ +++ A +F+
Sbjct: 275 LRVACGDLSLDLLQLQRPGGRRVGARDFL 303
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I FAGT A L L ++ ++ L+LT+PD +GRG+KL S VK A++ + +
Sbjct: 1 MRIAFAGTPEFARVALRQLLDAGFDVPLVLTQPDRPAGRGLKLQASAVKALAVERGLAVT 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+L+GKY A+ + L + D M+V ILP
Sbjct: 61 QPRSLRLDGKYPDDASAAREALEAAQLDAMVVAAYGLILP 100
>gi|375362217|ref|YP_005130256.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371568211|emb|CCF05061.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 317
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 73/314 (23%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK A +H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDM-----------------TKLF-- 131
T +T+ +EKL D I KIE ++ KL
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDA---GDMISKIEVEIHETDNVGTLHDKLSIAGAKLLSE 179
Query: 132 ---------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
KP Q +YAP IK+ + +DW+ + I +I NP+P A T
Sbjct: 180 TVPNVISGNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYTTL- 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKI 239
+ +K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++
Sbjct: 239 ----NGQTIKVWASEKVAAKTDAAPGTVIRTE-QNGIVVASGNSTALLITELQPAGKKRM 293
Query: 240 SATEFINGCIKNIK 253
+F+ G KN++
Sbjct: 294 KGEDFVRG--KNVQ 305
>gi|385264699|ref|ZP_10042786.1| Formyl transferase [Bacillus sp. 5B6]
gi|385149195|gb|EIF13132.1| Formyl transferase [Bacillus sp. 5B6]
Length = 317
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 69/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + +V ++T+PD GR + PVK A ++ I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERYGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYSCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLF---- 131
T +T+ +EKL +I I ++E D T KL
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSIAGAKLLSETV 181
Query: 132 -------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
KP Q +YAP IK+ + +DW+ + I +I NP+P A T ++
Sbjct: 182 PNVISGNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYT-TLNG 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISA 241
QN +K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++
Sbjct: 241 QN----IKVWASEKVAAKTEAAPGTVIRTE-QNGIVVAAGNSTALLITELQPAGKKRMKG 295
Query: 242 TEFINGCIKNIK 253
+F+ G KN++
Sbjct: 296 EDFVRG--KNVQ 305
>gi|308173536|ref|YP_003920241.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|384159443|ref|YP_005541516.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens TA208]
gi|384164122|ref|YP_005545501.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens LL3]
gi|384168490|ref|YP_005549868.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens XH7]
gi|307606400|emb|CBI42771.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|328553531|gb|AEB24023.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens TA208]
gi|328911677|gb|AEB63273.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens LL3]
gi|341827769|gb|AEK89020.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens XH7]
Length = 317
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 69/312 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT + +L TL + + ++T+PD GR + PVK A +H I ++Q
Sbjct: 3 RIVFMGTPDFSVPVLRTLIEDGYEVAGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++L + K+ + L+ F I + +LPE
Sbjct: 63 PEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLF---- 131
T +T+ +EKL +I I ++E D T KL
Sbjct: 123 YSILQGKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSVAGAKLLSETV 181
Query: 132 -------FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
KP Q +YAP IK+ + +DW+ + I +I NP+P A T ++
Sbjct: 182 PNVISGNIKPIRQDESKATYAPNIKREQERIDWTKPGEDIYNQIRGLNPWPVAYT-TLNG 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISA 241
QN +K+W + ++ + PGT++ NGI+V G L+ ELQ KK++
Sbjct: 241 QN----IKVWASEKVAANTEAAPGTVIRAE-QNGIVVASGNGTALLITELQPAGKKRMKG 295
Query: 242 TEFINGCIKNIK 253
+F+ G KN++
Sbjct: 296 EDFVRG--KNVQ 305
>gi|399117237|emb|CCG20051.1| methionyl-tRNA formyltransferase [Taylorella asinigenitalis 14/45]
Length = 320
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 104 LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIM 163
L +KL +L I I++ + I+ + + Q G +YA I+K+EA LDW++ +
Sbjct: 176 LHDKLAELGGIAIVEALADIKVLLDGA--QKQEEDGVTYAEKIQKSEAQLDWNMGTVQLE 233
Query: 164 RKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE--STKKPGTILNVNFHNGILVVC 221
RKI AFNPFPG ++ N +K+WKA + + S PG IL V +GI V
Sbjct: 234 RKIRAFNPFPG---VTLTLPNIDGVVKVWKADFTNSKRPSDAVPGQILRVG-SDGIDVAT 289
Query: 222 GKNVIKLLELQKNNKKKISATEFING 247
VI+LLELQK KK FING
Sbjct: 290 ADGVIRLLELQKPGGKKQDVASFING 315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT A + + ++ + I L++T+PD +GRGMKL SPVK AL+H K+I
Sbjct: 1 MKIVFAGTPDFARIAYEAIIDAGYEIPLVMTQPDRPAGRGMKLQASPVKVSALEHGAKVI 60
Query: 61 QPISLKLN----GKYHKIANETHKL-LNKIEFDIMIVMG---ILPE 98
QP+SL+L G I E K L + DI++V ILP+
Sbjct: 61 QPVSLRLTQGKLGPDAVIEAENAKAELEALSPDIIVVAAYGLILPQ 106
>gi|312864926|ref|ZP_07725156.1| methionyl-tRNA formyltransferase [Streptococcus downei F0415]
gi|311099546|gb|EFQ57760.1| methionyl-tRNA formyltransferase [Streptococcus downei F0415]
Length = 311
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 70/312 (22%)
Query: 2 KIIFAGTSISAAAILDTL-YNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
KIIF GT AA +L+ L +S++NI+ ++T+PD GR ++ +PVK+ A+ H + +
Sbjct: 3 KIIFMGTPAFAATVLEGLISSSDYNILAVVTQPDRAVGRKKEIRMTPVKELAIGHDLPVY 62
Query: 61 QPISLKLNGKYHKIANE--------------THKLLNKIEFDIMIVMGILP--------- 97
QP L + + + N KLL+ ++F + + +LP
Sbjct: 63 QPEKLAGSQEMADLMNLGADGIITAAYGQFLPSKLLDSMDFALNVHASLLPKYRGGAPIH 122
Query: 98 ------------------------------------EDTSLTLQNKLEKLSKILIIDTIK 121
ED TL KL L + L++ T+
Sbjct: 123 YALIKGDDKAGVTIMEMVKEMDAGDMLAQASLPILDEDNVGTLFEKLAVLGRDLLLQTLP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+Y K+ + Q S++P I + LDW+ SA+ + ++ NP+P A T
Sbjct: 183 --DYLSGKIQPQAQDPDRVSFSPNITPEQERLDWNKSARDLFNQVRGMNPWPVAHTLL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F KI++A ++ G I+ ++V G+ + LLE+Q K K+
Sbjct: 239 --NGQRF-KIYQAK--PVDGQGPAGQIIE-KTKKSLIVATGQGGLSLLEVQPAGKPKMKI 292
Query: 242 TEFINGCIKNIK 253
++F+NG + +K
Sbjct: 293 SDFLNGLGQKLK 304
>gi|148262894|ref|YP_001229600.1| methionyl-tRNA formyltransferase [Geobacter uraniireducens Rf4]
gi|189044512|sp|A5GBL0.1|FMT_GEOUR RecName: Full=Methionyl-tRNA formyltransferase
gi|146396394|gb|ABQ25027.1| methionyl-tRNA formyltransferase [Geobacter uraniireducens Rf4]
Length = 313
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 124/307 (40%), Gaps = 70/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI- 59
M+IIF GT A L L + +++ ++T+PD GRG + PVK A +H I +
Sbjct: 4 MRIIFMGTPEFACPTLQKLLDRGEDVIAVITQPDRPKGRGQQTLPPPVKVLAERHGIPVM 63
Query: 60 -----------------------------IQPISLKLNGKY-----HK------------ 73
I P SL KY H
Sbjct: 64 QPLKVRVPEVVESIRSLAPDLIVVVAFGQILPKSLLDIPKYGCINVHASLLPRWRGAAPL 123
Query: 74 ----IANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTI 120
I ET + + D+ + G I P++ + +L ++L + + +T+
Sbjct: 124 NWCIINGETETGVTTMMMDVGLDTGDMLVKRSTPIDPDENTQSLHDRLSVVGAEALAETL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ KL + Q + YAP++KK + ++DWS +TI + P+PGA ++
Sbjct: 184 DLLTA--GKLVREKQDDALTCYAPMLKKEDGLIDWSKEPQTIKNLVRGMTPWPGAFSFL- 240
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K LKI++ E T PG+++ G+ V C I + ELQ KK++
Sbjct: 241 ----DGKMLKIYRVGTAGGEGT--PGSVIRAG-REGLEVACSGGSIVIEELQLEGKKRLH 293
Query: 241 ATEFING 247
A +F+ G
Sbjct: 294 AGDFLAG 300
>gi|358063775|ref|ZP_09150377.1| methionyl-tRNA formyltransferase [Clostridium hathewayi WAL-18680]
gi|356698023|gb|EHI59581.1| methionyl-tRNA formyltransferase [Clostridium hathewayi WAL-18680]
Length = 319
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 130/307 (42%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK------ 54
M+I+F GT + L+ L + H++V ++T+PD GRG + +PVK+ A++
Sbjct: 1 MRIVFMGTPDFSVPTLEALVKAGHDVVGVVTQPDKPKGRGKAVLMTPVKEKAVELSIPVY 60
Query: 55 -----------HSIKIIQP--------------------------ISLKLNGKYHKIA-- 75
+++ ++P I L KY A
Sbjct: 61 QPVKARDESFIETLRELRPDVCVVIAFGQILPKAVLDIPKYGCVNIHASLLPKYRGAAPL 120
Query: 76 ------NETHKLLNKIEFDI------MIVMGILPED---TSLTLQNKLEKLSKILIIDTI 120
E + + D+ M+ ++P D T ++ +KL L LI+ T+
Sbjct: 121 QWVVLNGEKETGITTMMMDVGMDTGDMLEKAVVPMDDKETYGSIHDKLCVLGGELILSTL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
KKIE D T + PQ + +Y I K+ +DW++ A I R I NP+P A T +
Sbjct: 181 KKIE-DGT-IVRTPQKDEEATYTKKIVKSMGDIDWTMEAAVIERWIRGLNPWPSAYTSW- 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K K LKIW A ++ E G ++ V + IL+ GK + L LQ KK++
Sbjct: 238 ----KGKTLKIWDADVVNEEYPGSCGEVIAVE-KDSILMKTGKGALALKSLQLEGKKRMD 292
Query: 241 ATEFING 247
F+ G
Sbjct: 293 TDAFLRG 299
>gi|365102970|ref|ZP_09333076.1| methionyl-tRNA formyltransferase [Citrobacter freundii 4_7_47CFAA]
gi|363645821|gb|EHL85076.1| methionyl-tRNA formyltransferase [Citrobacter freundii 4_7_47CFAA]
Length = 315
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L +KL L +I+T+K++ K + +S + ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYDKLADLGPQGLIETLKQLAAGTIKPVVQDESLV--THAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A +++ + +PGTIL
Sbjct: 217 WSLSAVQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIAVNTQAEPGTILEAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ L+ LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLISLQPAGKKAMSAQDLLN 302
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQLLVADLHADVMVVVAYGLILP 96
>gi|154247232|ref|YP_001418190.1| methionyl-tRNA formyltransferase [Xanthobacter autotrophicus Py2]
gi|154161317|gb|ABS68533.1| methionyl-tRNA formyltransferase [Xanthobacter autotrophicus Py2]
Length = 307
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 125/306 (40%), Gaps = 68/306 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSG-RGMKLNFSPVKKYALKHSIKI 59
M+I+F GT A L + H +V + T+ +G RG+ L SPV + A + +K+
Sbjct: 1 MRIVFMGTPDFAVPTLSEIVGRGHEVVAVYTRAPAPAGRRGLDLTPSPVHQVAERFGLKV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL--------- 108
+ P SL+ + A + + + +++ + IL P L L L
Sbjct: 61 LTPKSLRTPEAAAEFAAHDADVAVVVAYGLILPLAILEAPRLGCLNLHGSLLPRWRGAAP 120
Query: 109 --------EKLSKILI------IDT-----IKKIEY--DMTK------------------ 129
++ + + + +DT +++I DMT
Sbjct: 121 IQRAIMAGDQATGVCVMQMEQGLDTGPVGLVERIPIGPDMTAGDLHDRMMVLGADLMARA 180
Query: 130 --------LFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
L F Q G +YA I+K E +DWS A+ + +I +PFPGA
Sbjct: 181 LAALERGGLAFTAQPEAGVAYAAKIEKAETRIDWSQPAQVVHDRIRGLSPFPGAWFPLGP 240
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
+ + K L+ A E PG +L+ + + + CG ++L+ELQK K+ A
Sbjct: 241 DETRVKVLRSTLA-----EGAGPPGDVLD----DRLTIACGSGAVRLVELQKAGKQPAGA 291
Query: 242 TEFING 247
+ F+NG
Sbjct: 292 SSFLNG 297
>gi|237728622|ref|ZP_04559103.1| methionyl-tRNA formyltransferase [Citrobacter sp. 30_2]
gi|226909244|gb|EEH95162.1| methionyl-tRNA formyltransferase [Citrobacter sp. 30_2]
Length = 315
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L +KL L +I+T+K++ K + +S + ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYDKLADLGPQGLIETLKQLAAGTIKPVVQDESLV--THAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A +++ + +PGTIL
Sbjct: 217 WSLSAVQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIAVNTQAEPGTILEAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ L+ LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLISLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLHADVMVVVAYGLILP 96
>gi|417917962|ref|ZP_12561516.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
SK236]
gi|342829277|gb|EGU63635.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
SK236]
Length = 311
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 70/312 (22%)
Query: 2 KIIFAGTSISAAAIL-DTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L +S + I+ ++T+PD GR ++ +PVK+ AL+H + ++
Sbjct: 3 KLIFMGTPDFSATVLKGLLADSRYEILAVVTQPDRKVGRKKEIRMTPVKQVALEHQLPVL 62
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP +SL +G KY A
Sbjct: 63 QPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGGAPIH 122
Query: 79 HKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ L+N E + +M IL ED TL KL L + L++D +
Sbjct: 123 YALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLLDALP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ PQ +++P I E VLDW+ + + + +I NP+P A T
Sbjct: 183 A--YLAGEIKPSPQDPSLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPVAHTLL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F K+++A E PG ++ + ++V G+ + L +Q K K+S
Sbjct: 239 --NGQRF-KVYEAEL--CEGNGNPGEVIALT-KKELVVAAGEGALSLKVVQPAGKPKMSI 292
Query: 242 TEFINGCIKNIK 253
T+F+NG + +K
Sbjct: 293 TDFLNGAGRQLK 304
>gi|241766902|ref|ZP_04764710.1| formyl transferase domain protein [Acidovorax delafieldii 2AN]
gi|241362643|gb|EER58481.1| formyl transferase domain protein [Acidovorax delafieldii 2AN]
Length = 296
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ +L ++L +L +I++ ++ +P + +YA I+K E+ +DWSL
Sbjct: 130 DTTASLHDRLAELGGRMIVEALELAACGGLHPVKQPAEGV--TYAHKIEKAESAVDWSLP 187
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIW--KAHALSIESTKKPGTILNVNFHNG 216
A I R I AF+PFPGA T + +K+W + H+ ++ G I+ + G
Sbjct: 188 AAAIGRHIRAFDPFPGASTTL-----GNETIKLWDYEIHSYQRSLDERCGQIVATDG-TG 241
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFING 247
+LV CG++ ++L LQ++ K++ A++F+ G
Sbjct: 242 VLVACGEDALRLTVLQRSGGKRLPASDFLRG 272
>gi|435853622|ref|YP_007314941.1| methionyl-tRNA formyltransferase [Halobacteroides halobius DSM
5150]
gi|433670033|gb|AGB40848.1| methionyl-tRNA formyltransferase [Halobacteroides halobius DSM
5150]
Length = 314
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 9/155 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DT +L +KL L+I T+K+IE K Q++ +YAP IKK E ++
Sbjct: 156 ITDQDTVGSLHDKLATTGANLLITTLKEIEAGTAP--RKKQNDGQATYAPKIKKEEGEIN 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKK--PGTILNVN 212
W+ AK I I NP+PGA TY + LK+W + S + +K+ PGTI+ +
Sbjct: 214 WNQEAKEIWNLIRGMNPWPGAYTYI-----NGERLKLWASQVYSKDQSKEMIPGTIIKTD 268
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI+V G+ + L ++Q +K+++SAT+++ G
Sbjct: 269 TEEGIIVQTGQGQLLLTKVQPASKQRMSATDYLLG 303
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
M+++F GT A LD L SE N++ ++++PD GRG K +PVKK AL++ I++
Sbjct: 1 MEVVFMGTPDFAVPCLDALCQSEVANLIGVVSQPDRKRGRGQKRQPTPVKKKALEYDIEV 60
Query: 60 IQP 62
QP
Sbjct: 61 FQP 63
>gi|417691631|ref|ZP_12340840.1| methionyl-tRNA formyltransferase [Shigella boydii 5216-82]
gi|332085436|gb|EGI90602.1| methionyl-tRNA formyltransferase [Shigella boydii 5216-82]
Length = 315
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ I +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLI--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + GTIL N
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTATNAALGTILEAN-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SP+K A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|340028001|ref|ZP_08664064.1| methionyl-tRNA formyltransferase [Paracoccus sp. TRP]
Length = 297
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDT+ L N+L ++ LI++ ++++ +PQ G +YA I K EA +D
Sbjct: 154 IGPEDTTADLHNRLAEMGAALIVEQLERLPQPA-----RPQPAEGVTYAQKIDKAEARID 208
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS A I R+I +PFPGA + + + K L+ S PG+
Sbjct: 209 WSQPAAQIDRQIRGLSPFPGA--WCLIGDERVKLLR----------SRLAPGSGAPGQVL 256
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G + CG+ +++LE Q+ K+ + A E + G
Sbjct: 257 SGFTIACGEGAVEVLEAQREGKRPMPAIEILRG 289
>gi|402851219|ref|ZP_10899389.1| Methionyl-tRNA formyltransferase [Rhodovulum sp. PH10]
gi|402498511|gb|EJW10253.1| Methionyl-tRNA formyltransferase [Rhodovulum sp. PH10]
Length = 310
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 120/307 (39%), Gaps = 69/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+F GT A + H++ + T+ +GRGM L SP+++ A + + I+
Sbjct: 3 LRIVFMGTPDFAVPTFLDIVGRGHDVAAVYTRAPKPAGRGMALQESPIEREARRFGLPIL 62
Query: 61 QPISLKLN---------------------------------GKYHKIANETHKLLNKIEF 87
P +L+ G Y+ A+ +
Sbjct: 63 TPKTLRSEEAQSVFRAHGADLAVVVAYGLILPKPILTAPPLGCYNLHASALPRWRGAAPI 122
Query: 88 DIMIVMGILPEDTSLTLQNKLEKLSKILII-----------------DTIKKIEYDMTK- 129
+ ++ G L DT + + E L + DT+ KI D+
Sbjct: 123 NRAVMAGDL--DTGVMVMKMDEGLDTGPVAMAAKAPIGPDATAGDMHDTLAKIGADLMAD 180
Query: 130 ---------LFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
L PQ G +YA I+K E +DW+L KT+ +PFPGA +
Sbjct: 181 ALSALERNGLTLTPQPETGVTYAAKIEKAETRIDWTLPWKTVHDHARGLSPFPGA---WF 237
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
K +++ + E + PGT+L+ H + + CG ++LL++Q+ ++ +
Sbjct: 238 ELPEAKGPVRVKVLRSTRGEGSGPPGTVLD---HK-LTIACGDGAVRLLQVQRAGRQPTT 293
Query: 241 ATEFING 247
A EF+ G
Sbjct: 294 ADEFLRG 300
>gi|89074759|ref|ZP_01161217.1| methionyl-tRNA formyltransferase [Photobacterium sp. SKA34]
gi|89049523|gb|EAR55084.1| methionyl-tRNA formyltransferase [Photobacterium sp. SKA34]
Length = 314
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 19/182 (10%)
Query: 75 ANETHKLLNKIEFDI------MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ DI M+ + LP DTS T+ KL L +ID + I
Sbjct: 130 AGDTETGVTIMQMDIGLDTGDMLKVATLPIEATDTSATMYEKLADLGPDALIDCLSDIA- 188
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY-ISYQN 184
+ T + K + +YA + K EA++DW++ A I R + AFNP+P +Y+ ++ QN
Sbjct: 189 NSTAVAVKQDDELA-NYAKKLSKEEALIDWTMDAAAIERCVRAFNPWP--MSYFTVAEQN 245
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+K+W+A K PGTIL+ + GILV G ++LL LQ KK ++A +
Sbjct: 246 ----IKVWQATVEDDNQGKVPGTILSAD-KQGILVATGNGALRLLSLQPPGKKAMTAADL 300
Query: 245 IN 246
+N
Sbjct: 301 LN 302
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA L L +S+H +V + T+PD +GRG KL SPVK AL+H I +
Sbjct: 5 LRIVFAGTPDFAARHLAALLSSQHQVVAVYTQPDRPAGRGKKLTSSPVKNIALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ E + L I+ DIM+V+ +LP++
Sbjct: 65 QPASLR--------NEEAQQELAAIKADIMVVVAYGLLLPQE 98
>gi|91790467|ref|YP_551419.1| methionyl-tRNA formyltransferase [Polaromonas sp. JS666]
gi|91699692|gb|ABE46521.1| methionyl-tRNA formyltransferase [Polaromonas sp. JS666]
Length = 357
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDT+ +L ++L L LI++ ++ + +P I +YA I+KNEA+LD
Sbjct: 195 IGPEDTTASLHDRLAGLGGRLIVNALELAAGGALRPLVQPSEGI--TYAHKIEKNEALLD 252
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKK----PGTILN 210
W+ SA + R+I AFNPFPGA + +K W+A A+ + + PG ++
Sbjct: 253 WTRSAAALERRIRAFNPFPGAAGVL-----DGETIKFWRA-AVPAGALRPVGVLPGQVVA 306
Query: 211 VNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI + ++++ LQK K + A +F+ G
Sbjct: 307 AG-PEGIDICAADALVRVTRLQKAGGKALEAADFLRG 342
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L +L + +I L+LT+PD +GRGMKL S VK++A H + +
Sbjct: 33 MRVIFAGTPEFARVALASLQAAGFDIPLVLTQPDRPAGRGMKLQASAVKQWAQSHQVPVA 92
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY A + D+M+V ILP+
Sbjct: 93 QPRSLRLDGKYPDDAAAARTAIEAARADVMVVAAYGLILPQ 133
>gi|347948733|pdb|3TQQ|A Chain A, Structure Of The Methionyl-Trna Formyltransferase (Fmt)
From Coxiella Burnetii
Length = 314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ L ++L + L+++++ K+E KL + Q +YA I+K EA++DW
Sbjct: 160 EDTAADLHDRLSLIGADLLLESLAKLEKGDIKL--EKQDEASATYASKIQKQEALIDWRK 217
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA I R++ AFNP P A TY+ + + +IW+A + ++ +PG +++ + GI
Sbjct: 218 SAVEIARQVRAFNPTPIAFTYF-----EGQPXRIWRATVVDEKTDFEPGVLVDAD-KKGI 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ G +++L +LQ K+ SA +FIN
Sbjct: 272 SIAAGSGILRLHQLQLPGKRVCSAGDFIN 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT A L L +S H ++ + T+PD SGRG K+ SPVK+ A ++ I II
Sbjct: 3 LKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIXESPVKEIARQNEIPII 62
Query: 61 QPISLK 66
QP SL+
Sbjct: 63 QPFSLR 68
>gi|455737431|ref|YP_007503697.1| Methionyl-tRNA formyltransferase [Morganella morganii subsp.
morganii KT]
gi|455418994|gb|AGG29324.1| Methionyl-tRNA formyltransferase [Morganella morganii subsp.
morganii KT]
Length = 314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 16/171 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L K E DI EDTS +L KL + ++ T+ + + L + Q
Sbjct: 147 DTGDMLYKAECDIT------SEDTSASLYEKLAGIGPQALLQTLSLVCQN--ALRPEKQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAH 195
+ +YA + K EA LDWSLSA + R I AFNP+P ISY ++ +K+W+A+
Sbjct: 199 DTLVTYAEKLSKEEARLDWSLSAAQLDRCIRAFNPWP------ISYMVIDEQPVKVWQAN 252
Query: 196 ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
A++ +++ PGT++ + NGI V + ++ + +LQ KK +SA + +N
Sbjct: 253 AIAEQTSAAPGTVIRAD-KNGIQVATAEGILNITQLQPAGKKPMSAADILN 302
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L SEHN+V +LT PD +GRG K+ PVK+ A +H I +
Sbjct: 5 LRIIFAGTPDFAARHLDALIQSEHNVVGVLTMPDRPAGRGKKITAGPVKELAQQHDIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP +L+ E H+ + + DIMIV+ ILP+
Sbjct: 65 QPSTLR--------KEENHQWIRDQQADIMIVVAYGMILPQ 97
>gi|296134590|ref|YP_003641832.1| methionyl-tRNA formyltransferase [Thiomonas intermedia K12]
gi|295794712|gb|ADG29502.1| methionyl-tRNA formyltransferase [Thiomonas intermedia K12]
Length = 327
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL +KL L L++ + +E +L +PQ G +YA I K+E++L W L
Sbjct: 176 DTASTLHDKLAVLGAALVVQGLDALERG--ELRPRPQPEAGVTYAAKISKDESLLQWDLP 233
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ + R++ AF P+PG + + Q+ +K+ A AL+ PG + + G+
Sbjct: 234 AELLARRVRAFTPWPGTQ---FTLQD-GGVVKVGAAEALTAPHVGPPGLVRQMT-AEGLD 288
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
VVCG V+++ LQK S +++ G
Sbjct: 289 VVCGSGVLRITRLQKPGGTMQSVAQWLQG 317
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++ FAGT AA L + ++ + L+LT+PD +GRGMKL SPVK+ A I++I
Sbjct: 10 LRVAFAGTPEFAAVALRAILSAGYTAPLVLTQPDRPAGRGMKLQSSPVKQVASAAQIEVI 69
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP L+L+G+Y + A + H L + D+++V
Sbjct: 70 QPQGLRLDGRYAEQAAQAHAALRAAQADVLVV 101
>gi|348589423|ref|YP_004873885.1| methionyl-tRNA formyltransferase [Taylorella asinigenitalis MCE3]
gi|347973327|gb|AEP35862.1| Methionyl-tRNA formyltransferase [Taylorella asinigenitalis MCE3]
Length = 320
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 104 LQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIM 163
L +KL +L I I++ + I+ + + Q G +YA I+K+EA LDW++ +
Sbjct: 176 LHDKLAELGGIAIVEALADIKVLLDGA--QKQEEDGVTYAEKIQKSEAQLDWNMGTMQLE 233
Query: 164 RKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIE--STKKPGTILNVNFHNGILVVC 221
R I AFNPFPG ++ N LK+WKA + + S PG IL V +GI V
Sbjct: 234 RNIRAFNPFPG---VTLTLPNIDGVLKVWKADFTNSKRPSDAVPGQILRVG-SDGIDVAT 289
Query: 222 GKNVIKLLELQKNNKKKISATEFING 247
VI+LLELQK KK FING
Sbjct: 290 ADGVIRLLELQKPGGKKQDVASFING 315
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT A + + ++ + I L++T+PD +GRGMKL SPVK AL+H K+I
Sbjct: 1 MKIVFAGTPDFARIAYEAIIDAGYEIPLVMTQPDRPAGRGMKLQASPVKVSALEHGAKVI 60
Query: 61 QPISLKLN----GKYHKIANETHKL-LNKIEFDIMIVMG---ILPE 98
QP+SL+L G I E K L + DI++V ILP+
Sbjct: 61 QPVSLRLTLGKLGPDAVIEAENAKAELEALSPDIIVVAAYGLILPQ 106
>gi|304415448|ref|ZP_07396097.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Candidatus Regiella insecticola
LSR1]
gi|304282712|gb|EFL91226.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Candidatus Regiella insecticola
LSR1]
Length = 319
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 8/156 (5%)
Query: 92 VMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEA 151
V I P+DTS+TL N+L + ++ T++ ++ K+ + Q +YA + K EA
Sbjct: 160 VYAIQPDDTSVTLYNELSVIGSEALLLTLQ--QFVDNKVRAEIQDEQQATYAEKLTKKEA 217
Query: 152 VLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNV 211
LDWSLSA + R I AFNP+P +Y+I Q+ +K+W+A L+ KPGTI+
Sbjct: 218 KLDWSLSALQLERCIRAFNPWP--VSYFIVDQH---LIKVWQAQVLTSTDNVKPGTIIQA 272
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ GI V + V+ + +LQ KK +SA + +N
Sbjct: 273 D-KKGIQVATAEGVLNITKLQIAGKKAMSAADVLNA 307
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L S+H +V +LT+PD +GRG SPVK A +H I +
Sbjct: 5 LRIIFAGTPDFAAYHLNRLLFSQHQVVGVLTQPDRPAGRGNNFTASPVKILAQQHEIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H + + L+ + DIM+V+ ILP
Sbjct: 65 QPVSLRSEENQHIVMD----LVTDKQADIMVVVAYGLILP 100
>gi|410088704|ref|ZP_11285393.1| Methionyl-tRNA formyltransferase [Morganella morganii SC01]
gi|421494912|ref|ZP_15942249.1| hypothetical protein MU9_3421 [Morganella morganii subsp. morganii
KT]
gi|400190801|gb|EJO23960.1| hypothetical protein MU9_3421 [Morganella morganii subsp. morganii
KT]
gi|409764839|gb|EKN48967.1| Methionyl-tRNA formyltransferase [Morganella morganii SC01]
Length = 324
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 16/171 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L K E DI EDTS +L KL + ++ T+ + + L + Q
Sbjct: 157 DTGDMLYKAECDIT------SEDTSASLYEKLAGIGPQALLQTLSLVCQN--ALRPEKQD 208
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAH 195
+ +YA + K EA LDWSLSA + R I AFNP+P ISY ++ +K+W+A+
Sbjct: 209 DTLVTYAEKLSKEEARLDWSLSAAQLDRCIRAFNPWP------ISYMVIDEQPVKVWQAN 262
Query: 196 ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
A++ +++ PGT++ + NGI V + ++ + +LQ KK +SA + +N
Sbjct: 263 AIAEQTSAAPGTVIRAD-KNGIQVATAEGILNITQLQPAGKKPMSAADILN 312
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L SEHN+V +LT PD +GRG K+ PVK+ A +H I +
Sbjct: 15 LRIIFAGTPDFAARHLDALIQSEHNVVGVLTMPDRPAGRGKKITAGPVKELAQQHDIPVF 74
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP +L+ E H+ + + DIMIV+ ILP+
Sbjct: 75 QPSTLR--------KEENHQWIRDQQADIMIVVAYGMILPQ 107
>gi|398807801|ref|ZP_10566673.1| methionyl-tRNA formyltransferase [Variovorax sp. CF313]
gi|398088835|gb|EJL79383.1| methionyl-tRNA formyltransferase [Variovorax sp. CF313]
Length = 319
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 10/151 (6%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+D + L ++L +L +I++ + D++ L PQ G +YA ++K+EA++DW+
Sbjct: 168 DDNTARLHDRLAELGARMIVEALA----DISALVRTPQPAEGVTYASKVEKHEALIDWAQ 223
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHAL-SIESTKKPGTILNVNFHNG 216
A I+R+I AF+PFPGA + + +K+W AHA+ S ++ PGTIL V+
Sbjct: 224 PADAIVRRIRAFDPFPGANSPL-----DGETIKLWAAHAVPSPMASAAPGTILAVSDAGV 278
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ +V+ + ELQ+ K+++ +F+ G
Sbjct: 279 AVAAAADSVVAVTELQRPGGKRLAVADFLRG 309
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT A L+ + + H++VL++++PD +GRGMKL SPVK+ A+ ++ +
Sbjct: 4 LRVVFAGTPEFARVALEAIAAAGHDVVLVMSQPDRPAGRGMKLQASPVKQCAVANNWPVA 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY A+ L D+M+V ILP+
Sbjct: 64 QPRSLRLDGKYPDEASAARDTLLAARPDVMVVAAYGLILPQ 104
>gi|344344900|ref|ZP_08775759.1| Methionyl-tRNA formyltransferase [Marichromatium purpuratum 984]
gi|343803594|gb|EGV21501.1| Methionyl-tRNA formyltransferase [Marichromatium purpuratum 984]
Length = 312
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
++T +L ++L +L +++ + I D T+ + Q + +YA + K+EA++DWS
Sbjct: 162 DETGGSLHDRLAELGARALVEALPGI-ADGTR-PAEAQDDEAATYAHKLTKDEALIDWSA 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A I R++ AF+P+P A T Q L++W A AL +T +PG ++ + H GI
Sbjct: 220 PAVAIERQVRAFDPWPVAHTRLDDEQ-----LRVWGARALDEATTAEPGRVVGADKH-GI 273
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V G+ ++ + LQ + K+ + A FIN
Sbjct: 274 RVATGEGLLCITRLQPSGKRPMEAAAFIN 302
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT A L L + H +V + T+PD +GRG KL SPVK+ AL+H+I +
Sbjct: 4 LRIIFAGTPDFACPSLAALIAAGHQVVGVYTQPDRPAGRGRKLQASPVKQLALEHAIPVH 63
Query: 61 QPISLKLN 68
QP SLK +
Sbjct: 64 QPQSLKRD 71
>gi|448237329|ref|YP_007401387.1| methionyl-tRNA formyltransferase [Geobacillus sp. GHH01]
gi|445206171|gb|AGE21636.1| methionyl-tRNA formyltransferase [Geobacillus sp. GHH01]
Length = 319
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 67/306 (21%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT A IL L + + + ++T+PD GR + PVK A + I ++QP
Sbjct: 4 IVFMGTPDFAVPILRQLLHDGYRVAAVVTQPDKPKGRKREPVPPPVKVEAERRGIPVLQP 63
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE--------- 98
++ +Y ++ L+ F I + +LPE
Sbjct: 64 TKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGGAPIHY 123
Query: 99 -------DTSLTLQNKLEKLS----------KILIIDTIKKIEYDMTKLFFK-------- 133
T +T+ +E+L I DT+ + ++ K
Sbjct: 124 AIWQGKTKTGVTIMYMVERLDAGDMLAQVEVPIAETDTVGTLHDKLSAAGAKLLSETLPL 183
Query: 134 ---------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
PQ +YAP I++ + ++W+ + I I AF+P+P ++Y
Sbjct: 184 LLEGNITPVPQDEEKATYAPNIRREQERINWTQPGEAIYNHIRAFHPWP------VTYTT 237
Query: 185 KKKFL-KIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISAT 242
+ + K+W + + PGTIL + NGI+V G + I++ ELQ KK+++A
Sbjct: 238 QDGHIWKVWWGEKVPAPRSAPPGTILALE-ENGIVVATGNETAIRITELQPAGKKRMAAG 296
Query: 243 EFINGC 248
EF+ G
Sbjct: 297 EFLRGA 302
>gi|418021015|ref|ZP_12660186.1| methionyl-tRNA formyltransferase [Candidatus Regiella insecticola
R5.15]
gi|347603633|gb|EGY28427.1| methionyl-tRNA formyltransferase [Candidatus Regiella insecticola
R5.15]
Length = 319
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 8/156 (5%)
Query: 92 VMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEA 151
V I P+DTS+TL N L + ++ T++ ++ K+ + Q+ +YA + K EA
Sbjct: 160 VYAIQPDDTSVTLYNALSVIGSEALLLTLQ--QFADNKVRAEIQNEQQATYAEKLTKKEA 217
Query: 152 VLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNV 211
LDWSLSA + R I AFNP+P +Y+I Q+ +K+W+A L+ KPGTI+
Sbjct: 218 KLDWSLSALQLERCIRAFNPWP--VSYFIVDQH---LIKVWQAQVLTSTDNVKPGTIIQA 272
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ GI V + V+ + +LQ KK +SA + +N
Sbjct: 273 D-KKGIQVATAEGVLNITKLQIAGKKAMSAADVLNA 307
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L +S+H +V +LT+PD +GRG L SPVK A +H I +
Sbjct: 5 LRIIFAGTPDFAAYHLNRLLSSQHQVVGVLTQPDRPAGRGNNLTASPVKILAQQHEIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H + + L+ + DIM+V+ ILP
Sbjct: 65 QPVSLRTEENQHIVMD----LVTDKQADIMVVVAYGLILP 100
>gi|188585960|ref|YP_001917505.1| methionyl-tRNA formyltransferase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229487503|sp|B2A2K2.1|FMT_NATTJ RecName: Full=Methionyl-tRNA formyltransferase
gi|179350647|gb|ACB84917.1| methionyl-tRNA formyltransferase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 313
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 68/309 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+ IF GT + ++ + S HN+ L++T+PD GRG +L P K+ A + I +
Sbjct: 1 MRTIFMGTPDFSVPFIEAIARSTHNLNLVVTQPDRRKGRGKELQPPPAKRKAEELGIDVF 60
Query: 61 QPISLKLNGKYHKIAN-ETH--------KLLNKIEFDIMIVMGI------LPE------- 98
QP S+ N Y +++ E H ++L + D+ + I LPE
Sbjct: 61 QPESIHNNYAYQILSDIEPHLIVTAAYGQILPRKILDLPRIKAINVHASLLPEYRGAAPI 120
Query: 99 ---------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGE------- 140
T +T+ +K+ IL +++ + D T +K +G
Sbjct: 121 HRAVMDGKEQTGVTIMEMCDKMDAGDILNYESVDIGKTDTTGDVYKQIITVGPQLLIETM 180
Query: 141 ------------------SYAPLIKKNEAVLDWSLSAKT-IMRKINAFNPFPGAKTYYIS 181
SYAP +KK + LD+S T + ++ NP+PGA T +
Sbjct: 181 DLLEKNQVTPLKQDENQVSYAPKLKKEDEYLDFSKYTNTEVFNRVRGLNPWPGAFTKF-- 238
Query: 182 YQNKKKFLKIW--KAHALSIESTK-KPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
+ K LKIW K H S ++ KPG I+ +N G +V C + + L ++Q + KK
Sbjct: 239 ---EGKRLKIWETKVHNSSSFNSNSKPGEIIEIN-QQGPVVKCCQGSVILTKIQPSGKKA 294
Query: 239 ISATEFING 247
++ +FI G
Sbjct: 295 MTGEQFIRG 303
>gi|325267953|ref|ZP_08134602.1| methionyl-tRNA formyltransferase [Kingella denitrificans ATCC
33394]
gi|324980639|gb|EGC16302.1| methionyl-tRNA formyltransferase [Kingella denitrificans ATCC
33394]
Length = 342
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ + + L L I+ ++++ L PQS G +YA + K A + W+
Sbjct: 190 DTANEVHDALMHLGAQAIVADLQQLRQ-TGSLHAVPQSEEGVTYAQKLSKEGAKIRWTEP 248
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A T+ RKI AFNP P A T + + LKIW+AH +E + G IL + +GI+
Sbjct: 249 ADTVARKIRAFNPVPAAWTL-----RQGQPLKIWQAH--PVERQGEAGRILAADA-DGIV 300
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFIS 257
V CG+N + + +LQ K++SA F+ G +I S
Sbjct: 301 VACGENALCITQLQPAGSKRMSAQAFLAGRTLDIGAVFS 339
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + +I L+LT+PD GRGM+ SPVK+ AL + +
Sbjct: 31 MKVIFAGTPDFAAAALRAIAAAGFDIPLVLTQPDRPKGRGMQQQASPVKQAALDLGLTVA 90
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N +E LL + D+M+V ILP++
Sbjct: 91 QPAKLRGN-------DEALALLRSADADVMVVAAYGLILPQE 125
>gi|373857267|ref|ZP_09600009.1| methionyl-tRNA formyltransferase [Bacillus sp. 1NLA3E]
gi|372452917|gb|EHP26386.1| methionyl-tRNA formyltransferase [Bacillus sp. 1NLA3E]
Length = 316
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 124/306 (40%), Gaps = 65/306 (21%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + +L +L ++++ ++T+PD GR + PVK A+ I + Q
Sbjct: 3 KIVFMGTPDFSVPVLRSLVEGGYDVIAVVTQPDKPVGRKKVMTPPPVKVEAINQGIPVFQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++ + I L+ F I + +LPE
Sbjct: 63 PEKIRRMEELEPILALKPDLVVTAAFGQILPNELLEAPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFK--------------- 133
T +T+ EKL IL ++ E D F+
Sbjct: 123 YSILQGKKKTGITIMYMAEKLDAGDILTQAEVQITEEDNVGTLFEKLSDAGSKLLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ ++AP IK+ + +DWS S + I I NP+P A T + S
Sbjct: 183 KLLSGEITPIPQDEEKATFAPNIKREQEKIDWSKSGEEIFNHIRGLNPWPVAYTIWNSLP 242
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISAT 242
LK+W+A + + PGT++ + +GI+V G + IK+ ELQ + KK++ A
Sbjct: 243 -----LKVWQAVKFQVTKQEAPGTVIEIQ-KDGIIVATGNQTAIKITELQPSGKKRMLAE 296
Query: 243 EFINGC 248
+F+ G
Sbjct: 297 QFLLGA 302
>gi|416054516|ref|ZP_11579208.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348003502|gb|EGY44095.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 319
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI P++TS L KL +++ +++ + + D T + Q
Sbjct: 147 DTGDMLHKVYCDIT------PQETSAGLYAKLAEVAPAALVEVLDHLT-DGT-FTAERQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 199 DAQSSYAEKLSKEEAKLNWQLSAVQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQATV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI +V V+ LL+LQ + KK +SA + +NG
Sbjct: 259 LP-HTNKAPGTILSADKH-GIQIVTVDGVLNLLQLQPSGKKPMSAQDLLNG 307
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 5 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 65 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 97
>gi|94971254|ref|YP_593302.1| methionyl-tRNA formyltransferase [Candidatus Koribacter versatilis
Ellin345]
gi|123256132|sp|Q1IIS2.1|FMT_ACIBL RecName: Full=Methionyl-tRNA formyltransferase
gi|94553304|gb|ABF43228.1| methionyl-tRNA formyltransferase [Candidatus Koribacter versatilis
Ellin345]
Length = 312
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
M I PEDTS +L +L +L L+++T+ ++E + PQ++ + AP++KK +
Sbjct: 154 MPIAPEDTSESLAPRLAELGAELLVETLARLEGGVIAAV--PQNHAEHTLAPILKKEDGQ 211
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
+D+ SA+ I+ ++ F P+PGA + ++ K F+ A ++ +T +PG L +
Sbjct: 212 IDFHRSAQEILNRLRGFTPWPGA---FTQFRGKGFFIH----QARAVAATLEPGE-LRIE 263
Query: 213 FHNGILVVCGKN-VIKLLELQKNNKKKISATEFINGCIKN 251
N +LV G N ++LLE+Q KK++ A +FING N
Sbjct: 264 GEN-LLVGAGHNTALELLEIQLEGKKRMPARDFINGYRPN 302
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M ++F GT A L+ + + H++ L++T+PD GRGM L FSPVK AL ++ +
Sbjct: 1 MILVFCGTPRFAVPSLEHIVRAGHDVRLVVTQPDRPKGRGMGLAFSPVKDAALALNLPVT 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP +K N E L+ I D +IV+G I+P+
Sbjct: 61 QPEKIKNN-------EEFRAQLSAIAPDAIIVVGYGRIIPQ 94
>gi|297583986|ref|YP_003699766.1| methionyl-tRNA formyltransferase [Bacillus selenitireducens MLS10]
gi|297142443|gb|ADH99200.1| methionyl-tRNA formyltransferase [Bacillus selenitireducens MLS10]
Length = 317
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 137/312 (43%), Gaps = 65/312 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IF GT + +L+ L S +++V+++T+PD GR +L PVK A K + +
Sbjct: 1 MKVIFMGTPDFSVPVLEGLCESGYDVVMVVTQPDRPKGRKKQLTPPPVKVAAEKRGLSVY 60
Query: 61 QPISLKLNGKY-HKIANETHKLLNKIEFDIM--------------IVMGILPE------- 98
QP ++ + H +A + L+ I+ + +LPE
Sbjct: 61 QPEKIRDPKEAEHVLAADADLLVTAAYGQILPKEILESTRLGCINVHASLLPEYRGGAPI 120
Query: 99 ---------DTSLTLQNKLEKLSKILII----------DTIKKIEYDMTKLFFK------ 133
T +T+ +EKL I+ DT + ++++ +
Sbjct: 121 HQAVIDGKNKTGITIMYMVEKLDAGDILTQRETPITDEDTTGTMHDRLSRIGAELLLETI 180
Query: 134 PQSNIGE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
P+ GE ++A IKK + +D+S SA+ + I NP+P A T
Sbjct: 181 PRLAAGELSPRRQDEEKVTFASNIKKEQERVDFSQSARAVFNHIRGLNPWPVAHTLL--- 237
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISA 241
K LK+W + + + PG I+ ++ +G+ V CG +++I+L +LQ KK + A
Sbjct: 238 --DGKRLKLWDSVEVEEHTAAAPGEIVALS-KSGVDVACGNRSIIRLTKLQPQGKKPMDA 294
Query: 242 TEFINGCIKNIK 253
F+ G KN++
Sbjct: 295 ATFLQGAGKNLE 306
>gi|403060218|ref|YP_006648435.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402807544|gb|AFR05182.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 315
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KI ILP+DTS TL +KL +L +++T++++ D + + + Q+
Sbjct: 147 DTGAMLHKIS------CSILPQDTSATLYDKLAELGPRGLLETLEQL-ADGSAVA-ETQN 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA L+W LSA+ + R I AFNP+P +Y+I ++ +K+WKA
Sbjct: 199 DALATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWP--VSYFIV---DEQPVKVWKAEV 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
++ +PGTI+ + GI V ++ + ELQ KK ++A + +N
Sbjct: 254 IAKAHGSQPGTIIQAD-KQGIQVATADGILNIQELQPAGKKVMAAQDLLN 302
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL SPVK A +HSI +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHEVVGVFTQPDRPAGRGNKLTPSPVKVLAEQHSIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E ++ + D+M+V+ ILP+
Sbjct: 65 QPKSLR--------PEENQAMVQALNADVMVVVAYGLILPQ 97
>gi|383817279|ref|ZP_09972656.1| methionyl-tRNA formyltransferase [Serratia sp. M24T3]
gi|383293899|gb|EIC82256.1| methionyl-tRNA formyltransferase [Serratia sp. M24T3]
Length = 312
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 15/171 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KI I EDTS TL KL +L + +++T++++E + +S
Sbjct: 143 DTGDMLHKIHCPIEA------EDTSATLYAKLAELGPVGMLETLQQLEQGTASPEVQDES 196
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P +Y++ + +K+W+A
Sbjct: 197 LV--TYAEKLSKEEARLDWSLSAGQLERCIRAFNPWP--VSYFVI---DDQPVKVWQAQV 249
Query: 197 LSIE-STKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ + S PGTIL + GI + + V+ + +LQ KK +SA + +N
Sbjct: 250 IDADKSGLAPGTILAAD-KKGIQIATAQGVLNITQLQPAGKKPMSAQDLLN 299
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT AA LD L SEH IV + T+PD +GRG KL SPVK AL+H I +
Sbjct: 1 MRIIFAGTPDFAARHLDALLTSEHQIVGVFTQPDRPAGRGNKLTPSPVKTLALQHDIPVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ ++ D+M+V+ ILP
Sbjct: 61 QPKSLRPEENQHLVAD--------LQADVMVVVAYGLILP 92
>gi|331649084|ref|ZP_08350170.1| methionyl-tRNA formyltransferase [Escherichia coli M605]
gi|417663859|ref|ZP_12313439.1| methionyl-tRNA formyltransferase [Escherichia coli AA86]
gi|330909332|gb|EGH37846.1| methionyl-tRNA formyltransferase [Escherichia coli AA86]
gi|331041582|gb|EGI13726.1| methionyl-tRNA formyltransferase [Escherichia coli M605]
Length = 315
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I FNP+P ++ + + +K+WKA + + PGTIL +
Sbjct: 217 WSLSAAQLERCIRTFNPWP---MSWLEIEGQP--VKVWKASVIDTVTKSAPGTILEAS-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|304437065|ref|ZP_07397028.1| methionyl-tRNA formyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370016|gb|EFM23678.1| methionyl-tRNA formyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 315
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 74/311 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLILTKPDLHSGRGMKLNFSPV---------- 48
M+ +F GT A AIL + +IV ++T+PD GRG KL+ SPV
Sbjct: 4 MRTVFMGTPDFAVAILAAMAERRDLTDIVAVVTQPDRPRGRGKKLSPSPVKAWALSHDIP 63
Query: 49 -------KKYALKHSIKIIQP----------------ISLKLNGK----------YHKIA 75
+ A ++ ++P + + ++G Y A
Sbjct: 64 VLQPARARDAAFAEELRALRPDVAVVAAFGQILTQEILDIPVHGCINVHASLLPLYRGAA 123
Query: 76 NETHKLLN--------KIEFDI------MIVMGILP--EDTSL-TLQNKLEKLSKILIID 118
H +++ ++ D M++ +P DT+ TL + L K L+++
Sbjct: 124 PIQHAVMDGAKMTGITTMQMDAGLDTGDMLLRREVPIHRDTTYGTLHDALMKTGAALLVE 183
Query: 119 TIKKIEYDMTKLFFKPQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
T++++ + L PQ+ GES YA I + A +DWS +A+ + + NP P A+T
Sbjct: 184 TLEQLAAGV--LTRTPQT--GESSYAARITRETAQIDWSRTARELDALVRGLNPVPYAET 239
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKP-GTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
+ + K L +L+ E T P GTIL + G+ V G ++++ E+Q K
Sbjct: 240 HLGDARYKIGML------SLTGERTDAPHGTILTADRRAGLRVAAGDEIVQVTEIQAPGK 293
Query: 237 KKISATEFING 247
+ ++A++F+NG
Sbjct: 294 RMMAASDFLNG 304
>gi|238754204|ref|ZP_04615562.1| Methionyl-tRNA formyltransferase [Yersinia ruckeri ATCC 29473]
gi|238707700|gb|EEQ00060.1| Methionyl-tRNA formyltransferase [Yersinia ruckeri ATCC 29473]
Length = 315
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+KI I PEDTS +L +KL +L ++ T++++ K + +
Sbjct: 147 DTGDMLHKIACQIQ------PEDTSASLYSKLAELGPQGMLTTLQQLAVGQAKPEVQDEQ 200
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA+ + R I AFNP+P +Y++ ++ +K+W+A
Sbjct: 201 LV--TYAEKLSKEEAKLDWSLSAQQLERCIRAFNPWP--VSYFVI---DEQPVKVWQAQV 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L +PGTI+ + GI V ++ + +LQ KK +SA + +N
Sbjct: 254 LPAVEDVQPGTIVQAD-KQGIQVGTADGMLNITQLQPAGKKSMSAADLLN 302
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++IFAGT AA LD L S H +V + T+PD +GRG KL SPVK A +H I +
Sbjct: 5 LRVIFAGTPDFAARHLDALTASRHQVVGVFTQPDRPAGRGNKLTPSPVKILAEQHHIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + DIM+V+ ILP
Sbjct: 65 QPKSLRPEENQHLVAD--------LNADIMVVVAYGLILP 96
>gi|163859047|ref|YP_001633345.1| methionyl-tRNA formyltransferase [Bordetella petrii DSM 12804]
gi|229487442|sp|A9IFQ1.1|FMT_BORPD RecName: Full=Methionyl-tRNA formyltransferase
gi|163262775|emb|CAP45078.1| fmt [Bordetella petrii]
Length = 320
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ L + L I+ + ++ L +PQ G +YA + K +A LD +
Sbjct: 167 DTAAQLHDALAAAGGQAIVQALAALQA--GNLPARPQPADGVTYAAKLDKAQAALDCAQP 224
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R++ AFNP PGA + + +K+W+A AL + + PG++L GI
Sbjct: 225 AALLARRVRAFNPVPGA---TLRLPGLDEPVKVWRAQALDASAAQAPGSVLRAG-PEGID 280
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
+ G V++LLELQK K+ F+ G
Sbjct: 281 IATGSGVLRLLELQKAGGKRQPVDVFVRG 309
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD L + H+I L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARVALDALLAAGHDIPLVLTQPDRPAGRGLKLTPSPVKQAALAAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+L+G+Y A + L + ++M+V ILP
Sbjct: 61 QPRSLRLDGRYPDDAAQAQAQLRQAAPEVMVVAAYGLILP 100
>gi|432399234|ref|ZP_19642008.1| methionyl-tRNA formyltransferase [Escherichia coli KTE25]
gi|432408359|ref|ZP_19651062.1| methionyl-tRNA formyltransferase [Escherichia coli KTE28]
gi|432724752|ref|ZP_19959665.1| methionyl-tRNA formyltransferase [Escherichia coli KTE17]
gi|432729335|ref|ZP_19964209.1| methionyl-tRNA formyltransferase [Escherichia coli KTE18]
gi|432743022|ref|ZP_19977736.1| methionyl-tRNA formyltransferase [Escherichia coli KTE23]
gi|432992386|ref|ZP_20181044.1| methionyl-tRNA formyltransferase [Escherichia coli KTE217]
gi|433112518|ref|ZP_20298373.1| methionyl-tRNA formyltransferase [Escherichia coli KTE150]
gi|430913107|gb|ELC34237.1| methionyl-tRNA formyltransferase [Escherichia coli KTE25]
gi|430927230|gb|ELC47794.1| methionyl-tRNA formyltransferase [Escherichia coli KTE28]
gi|431261971|gb|ELF53961.1| methionyl-tRNA formyltransferase [Escherichia coli KTE17]
gi|431271152|gb|ELF62291.1| methionyl-tRNA formyltransferase [Escherichia coli KTE18]
gi|431281179|gb|ELF72082.1| methionyl-tRNA formyltransferase [Escherichia coli KTE23]
gi|431491536|gb|ELH71140.1| methionyl-tRNA formyltransferase [Escherichia coli KTE217]
gi|431625767|gb|ELI94325.1| methionyl-tRNA formyltransferase [Escherichia coli KTE150]
Length = 315
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I E+TS TL +KL +L +I T+K++ K + ++ + +YA + K EA +D
Sbjct: 159 ITAEETSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + + +K+WKA + + PGTIL +
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIEGQP--VKVWKASVIDTVTKSAPGTILEAS-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGDGILNLLSLQPAGKKAMSAQDLLN 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLQADVMVVVAYGLILP 96
>gi|87121017|ref|ZP_01076909.1| methionyl-tRNA formyltransferase [Marinomonas sp. MED121]
gi|86163855|gb|EAQ65128.1| methionyl-tRNA formyltransferase [Marinomonas sp. MED121]
Length = 325
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 139/321 (43%), Gaps = 85/321 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSE----HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS 56
+KI+FAGT AAA L L S H ++ + ++PD +GRG KL SPVK+ AL+H
Sbjct: 8 LKIVFAGTPEFAAASLKALIESSNDENHEVIAVYSQPDRPAGRGQKLVASPVKQLALEHE 67
Query: 57 IKIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE--------------- 98
I + QP++ KL E ++L ++ DIM+V ILP+
Sbjct: 68 IPVYQPLNFKL--------EEDRQVLANLDADIMVVAAYGLILPKSVLDIPKLGCINVHA 119
Query: 99 ------------------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDM 127
D L + L K+S IL DT + +
Sbjct: 120 SLLPRWRGAAPIHRSLIEGDKETGITIMQMDVGLDTGDMLSKVSCDILDEDTSANLHDRL 179
Query: 128 T----KLFFKPQSNIGESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFN 170
L K I E K+++A+ +DW A + RKI +
Sbjct: 180 APLGGALLVKTLEQIKEGKHQAEKQDDALANYASKLTKQEGLIDWHTPAADLARKIRGLS 239
Query: 171 PFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-KPGTILNVNFHNGILVVCGKNVIKLL 229
P+PG+ Y+ + +K +KI +A S+E++ +PGT++ +N + ++V + I L
Sbjct: 240 PWPGS---YL--ETEKGNIKIHQASLHSLEASSFEPGTVIEIN-KDTVIVAAKEGSIALH 293
Query: 230 ELQKNNKKKISATEFINGCIK 250
++Q K+++ + +NG K
Sbjct: 294 KVQFPGGKQLAIRDALNGKFK 314
>gi|374313842|ref|YP_005060271.1| methionyl-tRNA formyltransferase [Serratia symbiotica str. 'Cinara
cedri']
gi|363988068|gb|AEW44259.1| methionyl-tRNA formyltransferase [Serratia symbiotica str. 'Cinara
cedri']
Length = 314
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 93/170 (54%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T ++N+I I DTS +L NKL + ++ T++++ K + ++
Sbjct: 147 DTGDIINRIACPIETT------DTSASLYNKLAECGSNCLLTTLQQLANGAVKRETQNKA 200
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
I +YA + K EA LDW+LSA + R I AFNP+P +Y+I ++ +K+W+A
Sbjct: 201 QI--TYAKKLSKEEARLDWNLSAIQLERCIRAFNPWP--ISYFIMHEQP---VKVWRASV 253
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L+ + KPGTI++ + GI V ++ L++LQ KK +SA E +N
Sbjct: 254 LAKNTDAKPGTIIHAD-KQGIQVATANGILNLIQLQPAGKKPMSAQELLN 302
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT A L L +SEH IV +LTKPD +GRG KL S VK A +H I +
Sbjct: 5 LRIIFAGTPYFATRHLKALLSSEHKIVGVLTKPDRPAGRGNKLTPSLVKVLAEQHQISVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ + + +L+ + D+++V+ ILPE
Sbjct: 65 QPKSLQ--------SKKNQQLIIDLNADVIVVVAYGLILPE 97
>gi|222153509|ref|YP_002562686.1| methionyl-tRNA formyltransferase [Streptococcus uberis 0140J]
gi|254789374|sp|B9DV45.1|FMT_STRU0 RecName: Full=Methionyl-tRNA formyltransferase
gi|222114322|emb|CAR43002.1| methionyl-tRNA formyltransferase [Streptococcus uberis 0140J]
Length = 311
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 73/317 (23%)
Query: 2 KIIFAGTSISAAAILDTL-YNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
KIIF GT +A +L L N + ++ ++T+PD GR ++ SPVK+ AL+H I +
Sbjct: 3 KIIFMGTPDFSATVLKGLIENPSYQLLAVVTQPDRAVGRKKEIKMSPVKEVALEHHIPVY 62
Query: 61 QP------------ISLKLNG------------------------------KYHKIANET 78
QP +SL +G KY A
Sbjct: 63 QPEKLSGSQELESIMSLDADGIVTAAFGQFLPTKLLDSVTFAVNVHASLLPKYRGGAPIH 122
Query: 79 HKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ L+N E + +M IL +D T+ +KL L + L+I T+
Sbjct: 123 YALINGEEEAGVTIMEMVKEMDAGDMIAKASTPILEDDNVGTMFDKLAILGRDLLIKTLP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
+Y +L Q++ +++P I + LD++ SA+ I ++ NP+P A TY+
Sbjct: 183 --DYLSGQLKPVAQNHAEATFSPNITSEQEKLDFTKSARAIFNQVRGMNPWPIAHTYF-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
N ++F KI++ L+IE PG ++ + ++V G + L +Q + K K++
Sbjct: 239 --NGERF-KIYE--LLAIEGQGAPGQVIE-KTKDSLIVATGSGAVSLRVVQPSGKPKMTI 292
Query: 242 TEFINGCIKNIK---YF 255
+++NG ++IK YF
Sbjct: 293 KDYLNGLGRDIKVGDYF 309
>gi|194367356|ref|YP_002029966.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
R551-3]
gi|238693438|sp|B4SKH6.1|FMT_STRM5 RecName: Full=Methionyl-tRNA formyltransferase
gi|194350160|gb|ACF53283.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
R551-3]
Length = 307
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT L +KL +L ++ D + + + K +PQ G +YA + K EA LDW L
Sbjct: 158 DTGGQLHDKLAELGAQVLSDGLGLLRAGI-KPVARPQPEQGVTYAHKLDKAEARLDWVLD 216
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R + AFNP+P A+ + ++I A AL + + PGT+L + +GI
Sbjct: 217 AGALARTVRAFNPWPIAEASLAGER-----VRIHGAVALDLAHGQAPGTVLAAS-RDGID 270
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFIN 246
+ CG+ ++L LQ+ K I+A +++N
Sbjct: 271 IACGQGALRLRVLQREGGKAITAADYLN 298
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT A + L H +V + T+PD +GRG L SPVK A+ I +
Sbjct: 1 MRIVFAGTPEFAVSSLRAAAR-HHEVVAVYTQPDRPAGRGRGLAPSPVKLEAVARGIPVY 59
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK + L ++ D+M+V+ ILP
Sbjct: 60 QPESLK--------DEAAQQQLRDLQPDLMVVVAYGLILP 91
>gi|350552660|ref|ZP_08921856.1| Methionyl-tRNA formyltransferase [Thiorhodospira sibirica ATCC
700588]
gi|349793335|gb|EGZ47171.1| Methionyl-tRNA formyltransferase [Thiorhodospira sibirica ATCC
700588]
Length = 312
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 82 LNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGES 141
L+ E + + I DT+ +L ++L KLS ++ ++ ++ + S + +
Sbjct: 146 LDTGEILLRLPCAIETTDTAQSLHDRLAKLSAQALMQGLEALQAGTLTSVVQDDSLV--T 203
Query: 142 YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIES 201
YA + K EA+LDWSLSA + R + A+NP+P A Y +Q + L+IW++ L ++
Sbjct: 204 YAAKLSKAEALLDWSLSAVELDRCVRAYNPWPVA---YTRWQGEN--LRIWESTVLDTQA 258
Query: 202 TKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ KP + NGI V G+ V+++ LQ K + A+EFI G
Sbjct: 259 SPKPPGQVLTESANGIDVATGQGVLRITRLQLPGAKALDASEFIKG 304
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I++AGT A L L S H +V + T+PD +GRG +L SPVK+ AL H + +
Sbjct: 5 LRIVYAGTPEFALHGLSALLASAHEVVAVYTQPDRPAGRGRQLTPSPVKQMALAHGLTVE 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SLK A L D+M+V ILP
Sbjct: 65 QPVSLK--------AEAAQAQLRAYAPDLMVVAAYGLILP 96
>gi|345429247|ref|YP_004822365.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet )
N-formyltransferase [Haemophilus parainfluenzae T3T1]
gi|301155308|emb|CBW14774.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet )
N-formyltransferase [Haemophilus parainfluenzae T3T1]
Length = 318
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI ++TS +L +KL +++ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDIDA------QETSASLYHKLAEIAPSALIDVLDHLEE--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P + Q ++ LKI+ A
Sbjct: 198 DSQSNYAEKLSKEEAKLDWSLSAVQLERNIRAFNPWPISFLQLTDEQGNEQTLKIYAAAV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L K GTIL+V+ GI + + V+ LL+LQ KK +S +F+NG
Sbjct: 258 LP-HVDKPAGTILSVD-KKGIQIATKEGVLNLLQLQPAGKKPMSVQDFLNG 306
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HNI+ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAAQHLAALLNSHHNIIAVYTQPDKPAGRGKKLQASPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E L + D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KEEAQAELKALNADVMVVVAYGLILPQ 96
>gi|78484537|ref|YP_390462.1| methionyl-tRNA formyltransferase [Thiomicrospira crunogena XCL-2]
gi|123755297|sp|Q31J85.1|FMT_THICR RecName: Full=Methionyl-tRNA formyltransferase
gi|78362823|gb|ABB40788.1| methionyl-tRNA formyltransferase [Thiomicrospira crunogena XCL-2]
Length = 312
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDT+ TL ++L L ++ T+ ++ D + + + +YA + K EA LD
Sbjct: 159 IKPEDTAQTLHDRLSALGCDAMMTTLSNLQTDQLSPVKQDERQV--TYAEKLNKAEAELD 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W SA+T+ R++ AFNP+P A T Y + + L+IW+A + K PG +++V+
Sbjct: 217 WQASAQTLARQVQAFNPWPVAFTQY-----QGQPLRIWQAEVGHASTQKSPGLVISVS-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G+ V GK + + ++Q + KK + A +F
Sbjct: 271 TGMEVATGKGSLLIKQVQPSGKKAMPAYDFAQA 303
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT + L TL +SEH +V + T+PD +GRG KL SPVK+ AL+H I +
Sbjct: 5 LRIIFAGTPDFSVPPLKTLIDSEHEVVAVYTQPDRPAGRGRKLTASPVKQTALEHDIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SLK E L ++ D+MIV+ ILP
Sbjct: 65 QPVSLK--------TPEAQAELEALQADVMIVVAYGLILP 96
>gi|374582949|ref|ZP_09656043.1| methionyl-tRNA formyltransferase [Desulfosporosinus youngiae DSM
17734]
gi|374419031|gb|EHQ91466.1| methionyl-tRNA formyltransferase [Desulfosporosinus youngiae DSM
17734]
Length = 322
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 138/322 (42%), Gaps = 85/322 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
M+I+F GT A L L ++ H++ + T+PD +GRG L F
Sbjct: 1 MRIVFMGTPDFAVPTLRALVSAGHDVAGVFTQPDRPAGRGKNLKPSPVKIAAGELGLPVF 60
Query: 46 SP--VKKYALKHSIKIIQPIS--------------LKLNGK------------YHKIANE 77
P +K +K + P S L+L GK Y A
Sbjct: 61 QPERIKTPESIRQLKDLAPESIIVVAYGQILSREILQLPGKGCINVHASLLPAYRGAAPI 120
Query: 78 THKLLNKIEFDIMIVM-----------------GILPEDTSLTLQNKLEKLSKILIIDTI 120
++N F + +M I E T+ + +KL + L+I+T+
Sbjct: 121 HWAVINGESFTGVTIMLMDEGLDTGDMLLKREIPIAHESTTGEIHDKLAIVGAELLIETL 180
Query: 121 KKIEYDMTKLFFKPQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
++E M + PQ+ G+S YAPL+K+ LDW+ A + +I NP+PGA +
Sbjct: 181 HELE--MGGIIPTPQT--GDSNYAPLLKREHERLDWTRRAAELHDQIRGLNPWPGA---F 233
Query: 180 ISYQNKKKFLKIWK----------AHALSIESTKK----PGTILNVNFHNGILVVCGKNV 225
S++ + LKIW+ A + E ++ PG I+ V + +LV G+ +
Sbjct: 234 SSFRGEN--LKIWRSTPFLQHDGIAPGMEAEDFERVLTDPGQIIQV-VGDSLLVQTGEGI 290
Query: 226 IKLLELQKNNKKKISATEFING 247
+++LE+Q K+ ++A +F NG
Sbjct: 291 LRVLEVQPAGKRVMAARDFFNG 312
>gi|377579902|ref|ZP_09808860.1| methionyl-tRNA formyltransferase [Escherichia hermannii NBRC
105704]
gi|377538769|dbj|GAB54025.1| methionyl-tRNA formyltransferase [Escherichia hermannii NBRC
105704]
Length = 315
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L +KL +L +I+T++ + K Q + ++A + K EA+LD
Sbjct: 159 ITAEDTSASLYDKLAELGPQGLIETLQLLATGAAKPEV--QDDSLATHAEKLSKEEALLD 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R + AFNP+P ++++ + +K+WKA + + +PGTIL + H
Sbjct: 217 WSLSAAQLERCVRAFNPWP--MSFFMM---DGQPVKVWKASVIDTPAHAEPGTILEADKH 271
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V + ++ L+ELQ KK + A + +N
Sbjct: 272 -GIRVATAQGILNLVELQPAGKKAMKAQDLLN 302
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L + +N+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLAALLAARYNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ ++ DIM+V+ ILP
Sbjct: 65 QPSSLR--------PAENQQLVAELNADIMVVVAYGLILP 96
>gi|292489814|ref|YP_003532704.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia amylovora CFBP1430]
gi|292900856|ref|YP_003540225.1| methionyl-tRNA formyltransferase [Erwinia amylovora ATCC 49946]
gi|428786795|ref|ZP_19004272.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia amylovora ACW56400]
gi|291200704|emb|CBJ47837.1| methionyl-tRNA formyltransferase [Erwinia amylovora ATCC 49946]
gi|291555251|emb|CBA23522.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia amylovora CFBP1430]
gi|312173997|emb|CBX82250.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia amylovora ATCC BAA-2158]
gi|426274636|gb|EKV52377.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia amylovora ACW56400]
Length = 315
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS TL +KL L +I T+ ++ + + ++ + SYA + K E+ LDWSLS
Sbjct: 163 DTSATLYDKLADLGPAGLISTLAQLADGSAQPQVQDEAKV--SYADKLSKEESRLDWSLS 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R I AFNP+P +Y++ ++ +K+WKA L S ++PG +L + GI
Sbjct: 221 AAQLERCIRAFNPWP--VSYFVI---DEQPVKVWKASVLPAVSGRQPGEVLQAD-KQGIQ 274
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFIN 246
VV V+ + ELQ KK + A + +N
Sbjct: 275 VVTADGVLNIEELQPAGKKAMKAQDLLN 302
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA LD L +S H +V + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 5 LNIIFAGTPDFAARHLDALLSSGHRVVGVFTQPDRPAGRGNKLTASPVKQLAEQHHIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E + + + D+M+V+ ILP
Sbjct: 65 QPSSLR--------PEENQQRVAALNADVMVVVAYGLILP 96
>gi|261378987|ref|ZP_05983560.1| methionyl-tRNA formyltransferase [Neisseria cinerea ATCC 14685]
gi|269144602|gb|EEZ71020.1| methionyl-tRNA formyltransferase [Neisseria cinerea ATCC 14685]
Length = 308
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 72/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM------------KLNFSPV 48
MK+IFAGT AAA L + + + L+LT+PD GRGM +L + V
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEVPLVLTQPDRPKGRGMQLTASPVKQAALELGLTVV 60
Query: 49 KKYALKHSIKIIQ-------------------PISLKLNGKYHKIANETHKLLNK----- 84
+ L+++ + +Q P + L+ H N LL +
Sbjct: 61 QPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEV-LDTPKHGCLNIHASLLPRWRGAA 119
Query: 85 -----------------IEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIID 118
++ DI + G I DT+ + + L L I+
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQQTDTANEVHDALMGLGAEAIVV 179
Query: 119 TIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
+++++ + +L Q G +YA + K EA +DW+ SA I RKI AFNP P A
Sbjct: 180 DLRRLQAE-GRLNAVKQPEEGVTYAQKLSKEEARIDWNESAAVIERKIRAFNPVPAA--- 235
Query: 179 YISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKK 238
++ YQ K +KIW+A ++ + K G +L+ + +G++V CG+N + + ELQ ++
Sbjct: 236 WVEYQGKP--MKIWRAEVVAQQG--KAGEVLSCS-ADGLVVACGENALNITELQPAGGRR 290
Query: 239 ISATEFING 247
++ F G
Sbjct: 291 MNIAAFAAG 299
>gi|302035776|ref|YP_003796098.1| methionyl-tRNA formyltransferase [Candidatus Nitrospira defluvii]
gi|300603840|emb|CBK40172.1| Methionyl-tRNA formyltransferase [Candidatus Nitrospira defluvii]
Length = 316
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 87/150 (58%), Gaps = 8/150 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ TL +L ++ L+++T++++E L +PQ + + APL+KK + +++W+L
Sbjct: 158 DDTAGTLAPRLAEVGGRLLVETLRRLEAG--TLTPQPQDDAQATMAPLLKKEDGMVEWTL 215
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A I ++ +P+PGA TY N +++ +W+ S PGT+ V+ + +
Sbjct: 216 PATEIANRVRGLSPWPGAYTYV----NGERW-GLWRVAVGEEVSGAAPGTVTKVS-KDRV 269
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
V G+ I+L+++Q +N ++++ +++ G
Sbjct: 270 EVATGEGTIQLIDIQPSNSRRMTMAQYLAG 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A L+ L SEH +V ++T+PD GRG ++ FSPVK + I ++
Sbjct: 1 MRIVFMGTPDFAVPSLEALLKSEHQVVGVVTQPDRPKGRGQEVVFSPVKIVCQREGIPVL 60
Query: 61 QPISLK 66
QP+ +K
Sbjct: 61 QPLKMK 66
>gi|149375619|ref|ZP_01893388.1| methionyl-tRNA formyltransferase [Marinobacter algicola DG893]
gi|149360021|gb|EDM48476.1| methionyl-tRNA formyltransferase [Marinobacter algicola DG893]
Length = 311
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 124/307 (40%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
M+++FAGT AA L +L + H++V + ++PD +GRG KL F
Sbjct: 1 MRLVFAGTPEFAATALKSLLTTHHHVVGVYSQPDRPAGRGRKLTPSPVKQVAVEAGIPVF 60
Query: 46 SP---------------------VKKYAL----------KHSI-----------KIIQPI 63
P V Y L +H + PI
Sbjct: 61 QPESLKSPEAQDELRSLNADVMIVAAYGLILPQVVLDLPRHGCLNIHASLLPRWRGAAPI 120
Query: 64 SLKLNGKYHKIANETHKLLNKIEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTI 120
+ + ++ ++ M++ I P DT +L ++L L I+ +
Sbjct: 121 QRAIAAGDRETGITIMQMDAGLDTGAMLLKAITPIEEADTGGSLHDRLAGLGGEAIVKAL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+++E +L + Q YA + K E +DW+ A I R I AFNP+PG Y
Sbjct: 181 EQLEK--GELQGEIQDEARACYARKLSKEEGHIDWTRDAPAISRLIRAFNPWPGT---YT 235
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ + ++I +A L S K PGT++ + GI + CG +++ LQ + + S
Sbjct: 236 DLEDLR--IRIHQAEILDDTSDKHPGTVIRRD-RTGIDIACGLESLRITRLQLSGSRPQS 292
Query: 241 ATEFING 247
+ ING
Sbjct: 293 VNDLING 299
>gi|375088920|ref|ZP_09735257.1| methionyl-tRNA formyltransferase [Dolosigranulum pigrum ATCC 51524]
gi|374561087|gb|EHR32436.1| methionyl-tRNA formyltransferase [Dolosigranulum pigrum ATCC 51524]
Length = 316
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 70/309 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
KIIF GT + IL+ L + ++T+PD GR L PVK+ A + I ++
Sbjct: 3 KIIFMGTPQFSVPILEALCEQTGIEVQCVVTQPDRKVGRKRVLTAPPVKQCAERFGINVL 62
Query: 61 QPISLK-------------------------------------------LNGKYHKIANE 77
QP +++ L KY A
Sbjct: 63 QPETIRGSEELDIMKELAPDLIITAAFGQFLPKELLDLPTYGAINIHASLLPKYRGAAPI 122
Query: 78 THKLLNKIEFDIMIVMGILPE--------DTSLTLQNK---------LEKLSKILIIDTI 120
+ + N E + +M + P+ +T+Q++ L L + L+IDT+
Sbjct: 123 HYAIKNGDEKTGVTIMYMTPKMDAGDMLAKREMTIQDQHDTGDLFEALSLLGRDLLIDTL 182
Query: 121 KKI-EYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
K+ ++T + PQ +YAP+I E +DW+ SA+ I K+ AF PFP T++
Sbjct: 183 PKLFNNELTPV---PQDESQVTYAPMISSEEEEIDWTESARAIYNKVRAFRPFPSTHTFF 239
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ + K+W+ ++ + PG I++V+ + N I L+ +Q K K+
Sbjct: 240 -----QGERFKLWEVAEVAGNTAASPGEIIHVSPDELHVAAGDGNGIALIRVQPAGKSKM 294
Query: 240 SATEFINGC 248
S T ++ G
Sbjct: 295 SITSYLQGA 303
>gi|337755316|ref|YP_004647827.1| methionyl-tRNA formyltransferase [Francisella sp. TX077308]
gi|336446921|gb|AEI36227.1| Methionyl-tRNA formyltransferase [Francisella sp. TX077308]
Length = 312
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 133/303 (43%), Gaps = 62/303 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ A+ ++ ++
Sbjct: 4 LNIIFAGTPDISAQVLKDLYQSQHNIQAVLTQPDRAKGRGKKIQFSPVKEVAIANNTPVL 63
Query: 61 QPISLKLNGKYHKIANE---------THKLLNKIEF-DIM------IVMGILPE------ 98
QP+S K + + + E + ++ EF DI I + +LP+
Sbjct: 64 QPLSFKKDPQVLEQIRELKPDVIVVIAYGIIVPQEFLDISKYGCLNIHVSLLPKWRGAAP 123
Query: 99 -------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLFFKP---- 134
D L + L L I DT + + KL KP
Sbjct: 124 IQRAIQAGDSKTGICIMQMDAGLDTGDILNTLEIDIQDTDTSQSLHDKFAKLSIKPLLET 183
Query: 135 ---------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
Q GE +YA I K E ++D++ SAK I I AF P+P A + +
Sbjct: 184 LENIDMIKSQPQQGEPTYAHKITKQEGLIDFTKSAKEISCHIRAFTPWPSA---FFMLEG 240
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
++ +K+ L + + I ++ NG + +I+ +LQ NKK ++ +
Sbjct: 241 EQ--VKVGDFEILEKSANDEVTAITDIT-KNGFDIATNDRIIRFKQLQFPNKKMLNIADI 297
Query: 245 ING 247
+NG
Sbjct: 298 LNG 300
>gi|58040266|ref|YP_192230.1| methionyl-tRNA formyltransferase [Gluconobacter oxydans 621H]
gi|73919396|sp|Q5FPX2.1|FMT_GLUOX RecName: Full=Methionyl-tRNA formyltransferase
gi|58002680|gb|AAW61574.1| Methionyl-tRNA formyltransferase [Gluconobacter oxydans 621H]
Length = 304
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 120/306 (39%), Gaps = 71/306 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT + L L ++ H +V + T+P +GRG L SPV + A I++
Sbjct: 1 MRLIFMGTPDFSVPALHALLDAGHEVVAVYTQPPRPAGRGKALRRSPVHEAAEAAGIEVR 60
Query: 61 QPISLKLNGKYHKIANETHK----------LLNKIEFD------IMIVMGILPE------ 98
P ++ + H+ + +L K D + I +LP
Sbjct: 61 TPARVRRDTAEHEAFAALNADAAVVAAYGLILPKAMLDAPRLGCLNIHASLLPRWRGASP 120
Query: 99 -----------------------DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFK-- 133
DT L LE+ + I DT + ++++ +
Sbjct: 121 IQSAIVAGDSQSGVSIMQMDEGLDTGAVL---LEEATPISATDTASTLHDRLSEIGGRLV 177
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
PQ G +YA + ++ +DW+ SA I R+I P+PGA T
Sbjct: 178 VRALAEQPKPVPQPEDGVTYAERLTRDHGRIDWTRSAAEIDRQIRGLTPWPGAFTTL--- 234
Query: 183 QNKKKFLKIWKAHALSIES-TKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
LKI A L ES + PGT L + + CG +++ LQK + +SA
Sbjct: 235 --DDVVLKIGAATPLPAESHSAAPGTTLG----ESLTIACGTGALRIDRLQKPGRSMMSA 288
Query: 242 TEFING 247
++F+ G
Sbjct: 289 SDFLRG 294
>gi|325577100|ref|ZP_08147584.1| methionyl-tRNA formyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325160682|gb|EGC72803.1| methionyl-tRNA formyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 318
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI ++TS +L +KL +++ +ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDID------DQETSASLYHKLAEIAPSALIDVLDHLEE--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P + Q ++ LK++ A
Sbjct: 198 DSQSNYAEKLSKEEAKLDWSLSAAQLERNIRAFNPWPISFLQLTDEQGNEQTLKVYAATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L K GTIL+V+ GI + + V+ LL+LQ KK +S +F+NG
Sbjct: 258 LP-HVDKPAGTILSVD-KKGIQIATKEGVLNLLQLQPAGKKPMSVQDFLNG 306
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HNI+ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAAQHLTALLNSHHNIIAVYTQPDKPAGRGKKLQASPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E L + D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KEEAQAELKALNADVMVVVAYGLILPQ 96
>gi|146313353|ref|YP_001178427.1| methionyl-tRNA formyltransferase [Enterobacter sp. 638]
gi|166988366|sp|A4WF96.1|FMT_ENT38 RecName: Full=Methionyl-tRNA formyltransferase
gi|145320229|gb|ABP62376.1| methionyl-tRNA formyltransferase [Enterobacter sp. 638]
Length = 315
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL L +I+T++++ + + ++ + +YA + K EA LD
Sbjct: 159 ITAEDTSATLYDKLADLGPQGLIETLQQLADGKAQPEVQDEAFV--TYAEKLSKEEAQLD 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ ++ +KIWKA ++ E+ +PGTI+
Sbjct: 217 WSLSAAQLERCIRAFNPWP------MSWMTIDEQPVKIWKASVINREAKAEPGTIIEAT- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V ++ L LQ KK +SA + +N
Sbjct: 270 REGIQVATADGILNLESLQPAGKKAMSAQDLLN 302
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H IV + T+PD +GRG KL PVK A KH++ +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGKKLMPGPVKVLAEKHNLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L++ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVSDLNADVMVVVAYGLILP 96
>gi|429733357|ref|ZP_19267597.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans Y4]
gi|429154959|gb|EKX97664.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans Y4]
Length = 319
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI P++TS L KL +++ +++ + + D T + Q
Sbjct: 147 DTGDMLHKVYCDIT------PQETSAGLYAKLAEVAPAALVEVLDHLT-DGT-FTAERQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 199 DAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQATV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 259 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 307
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 5 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 65 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 97
>gi|415756701|ref|ZP_11481141.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416035792|ref|ZP_11573562.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|416049155|ref|ZP_11576474.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|416068280|ref|ZP_11582715.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|347991971|gb|EGY33409.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|347997200|gb|EGY38224.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|348001178|gb|EGY41932.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|348655723|gb|EGY71163.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 318
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI P++TS L KL +++ +++ + + D T + Q
Sbjct: 146 DTGDMLHKVYCDIT------PQETSAGLYAKLAEVAPAALVEVLDHLT-DGT-FTAERQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 198 DAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 258 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 306
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 96
>gi|134299561|ref|YP_001113057.1| methionyl-tRNA formyltransferase [Desulfotomaculum reducens MI-1]
gi|172044290|sp|A4J579.1|FMT_DESRM RecName: Full=Methionyl-tRNA formyltransferase
gi|134052261|gb|ABO50232.1| methionyl-tRNA formyltransferase [Desulfotomaculum reducens MI-1]
Length = 317
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 81/314 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT AA L L ++ +V ++T+PD GRG ++ PVK A ++ I ++
Sbjct: 1 MRIVFMGTPDFAATSLKALIDAGQQVVAVVTQPDKPKGRGRQVQPPPVKVLANEYKIPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP-------------------- 97
QP S+K+ NE + + +++ + ++V+ ILP
Sbjct: 61 QPTSIKI--------NEFQQTIEELKPECIVVVAYGKILPTEILELPPKGCINVHASLLP 112
Query: 98 ----------------EDTSLT---LQNKLEKLSKIL-------IIDTI----KKIEYDM 127
E+T +T + ++ IL DT+ K+ D
Sbjct: 113 YYRGSAPIHWAIINGEEETGVTTMFMDKGMDTGDMILKSSVSIGPSDTVGAIHDKLASDG 172
Query: 128 TKLFFKPQSNIGESYAPLIKKN-------------EAVLDWSLSAKTIMRKINAFNPFPG 174
KL + + E AP I +N ++ W LSAK I + NP+PG
Sbjct: 173 AKLLIETIHLLEEDCAPRIPQNHKLATYAPMLRKEHELIHWDLSAKDIHNHVRGMNPWPG 232
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIES-TKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
T + K LKIW+ + ++ PGT+L V+ +GILV I + ELQ
Sbjct: 233 TYTIW-----DNKILKIWQTTIPAHQNIDADPGTVLEVS-PSGILVQTAGGQILIKELQL 286
Query: 234 NNKKKISATEFING 247
+++ TEF+ G
Sbjct: 287 QGSRRMEVTEFLRG 300
>gi|347755218|ref|YP_004862782.1| methionyl-tRNA formyltransferase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587736|gb|AEP12266.1| methionyl-tRNA formyltransferase [Candidatus Chloracidobacterium
thermophilum B]
Length = 324
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
E+T+ L +L L L+ D ++++ +L +PQ +YAPL+K+ + +DWSL
Sbjct: 158 EETAPELGARLAHLGAELLSDALRQLAEG--QLPRRPQDATQATYAPLLKREDGWIDWSL 215
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK--KPGTILNVNFHN 215
A I +I AF PFPG+ TY + + W+ ++ + + + PGT+L V N
Sbjct: 216 PATAIAARIRAFQPFPGSHTYLAG-----RRVTFWRGQSVPLPAGEAASPGTLLAVT-DN 269
Query: 216 GILVVCGKNV-IKLLELQKNNKKKISATEFING 247
+L+ CG+ + ELQ + ++SA +F NG
Sbjct: 270 ALLITCGQGTGLSAQELQLEGRARVSARDFANG 302
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A L L+ H++V ++T+PD +GRG +L PVK A + + +
Sbjct: 1 MRIVFMGTPDLAVPTLRRLHQDGHDLVAVVTQPDRPAGRGHRLQPPPVKVAAQELGLPVW 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP +K + H L ++ D+ +V+ ILP
Sbjct: 61 QPTKIK--------TPDFHANLAALDADVGVVVAYGRILP 92
>gi|347522235|ref|YP_004779806.1| methyonyl-tRNA formyltransferase [Lactococcus garvieae ATCC 49156]
gi|385833620|ref|YP_005871395.1| methyonyl-tRNA formyltransferase [Lactococcus garvieae Lg2]
gi|343180803|dbj|BAK59142.1| methyonyl-tRNA formyltransferase [Lactococcus garvieae ATCC 49156]
gi|343182773|dbj|BAK61111.1| methyonyl-tRNA formyltransferase [Lactococcus garvieae Lg2]
Length = 317
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 70/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
KIIF GT + +L L +S+ ++I+ ++T+PD GR +L +PVK+ ALK +KI+
Sbjct: 5 KIIFMGTPQFSQTVLQGLIDSQCYDILAVVTQPDRKVGRKQELRQTPVKELALKADLKIL 64
Query: 61 QPISLKLNGKYHKI----ANET------------HKLLNKIEFDIMIVMGILP------- 97
QP L + + ++ A KLL+ + F + + +LP
Sbjct: 65 QPEKLSGSPEMEELLAFGAQGAGIVTAAFGQFLPGKLLDAMAFAVNVHASLLPKYRGGAP 124
Query: 98 --------------------------------------EDTSLTLQNKLEKLSKILIIDT 119
ED T+ KL + + L+++T
Sbjct: 125 IHYAIMNGEKEAGVTIMEMVRKMDAGDMVAKASTPILEEDNVGTMFEKLAVVGRDLLLET 184
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ Y ++ K Q +++P I E +DW+ S + I +I NPFP A T +
Sbjct: 185 LPL--YVAGEIKPKAQDETQATFSPNISPEEEKIDWTKSNRQIFNQIRGMNPFPVAHTTW 242
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
N+ +F KI+ + + E + G I++ ++V G ++LLE+Q K K+
Sbjct: 243 ----NEGRF-KIYDSRPIDTEKNGQAGEIID-KTKKSLVVETGSGALELLEVQPAGKPKM 296
Query: 240 SATEFINGCIKNI 252
F+NG K +
Sbjct: 297 DIVSFLNGLGKKV 309
>gi|183600720|ref|ZP_02962213.1| hypothetical protein PROSTU_04316 [Providencia stuartii ATCC 25827]
gi|386743664|ref|YP_006216843.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Providencia stuartii MRSN 2154]
gi|188019700|gb|EDU57740.1| methionyl-tRNA formyltransferase [Providencia stuartii ATCC 25827]
gi|384480357|gb|AFH94152.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Providencia stuartii MRSN 2154]
Length = 315
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I+PEDTS TL KL + +I T++ I + + Q + +YA + K EA +D
Sbjct: 159 IMPEDTSATLYEKLAVIGPEALIHTLELISNQ--QCVPEKQDDSLANYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W SA+ I R I AFNP+P Y + Q ++ +K+W+A ++ ++PGTIL+ +
Sbjct: 217 WQQSAEQIERCIRAFNPWP---MSYFTVQ--EQLIKVWQAQVIAENHNEQPGTILSAD-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
NGI V G + + +LQ KK + A + +N
Sbjct: 271 NGICVATGNGKLNITQLQPPGKKAMGAQDLLN 302
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA L L ++H +V +LT PD +GRG KL SPVK A +H I +
Sbjct: 5 LKIIFAGTPDFAAGHLAALLKTKHQVVGVLTPPDKPAGRGKKLTPSPVKVLAQEHQIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP +LK + N H+ + D+MIV+ ILP
Sbjct: 65 QPTTLK------NVDN--HQWIKDHNADLMIVVAYGFILP 96
>gi|153206914|ref|ZP_01945732.1| methionyl-tRNA formyltransferase [Coxiella burnetii 'MSU Goat
Q177']
gi|212219504|ref|YP_002306291.1| methionyl-tRNA formyltransferase [Coxiella burnetii CbuK_Q154]
gi|238065947|sp|B6J655.1|FMT_COXB1 RecName: Full=Methionyl-tRNA formyltransferase
gi|120576987|gb|EAX33611.1| methionyl-tRNA formyltransferase [Coxiella burnetii 'MSU Goat
Q177']
gi|212013766|gb|ACJ21146.1| methionyl-tRNA formyltransferase [Coxiella burnetii CbuK_Q154]
Length = 314
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ L ++L + L+++++ K+E KL + Q +YA I+K EA+++W
Sbjct: 160 EDTAADLHDRLSLIGADLLLESLAKLEKGDIKL--EKQDEASATYASKIQKQEALINWRK 217
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA I R++ AFNP P A TY+ + + ++IW+A + ++ +PG +++ + GI
Sbjct: 218 SAVEIARQVRAFNPTPIAFTYF-----EGQPMRIWRATVVDEKTDFEPGVLVDAD-KKGI 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ G +++L +LQ K+ SA +FIN
Sbjct: 272 SIAAGSGILRLHQLQLPGKRVCSAGDFIN 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT A L L +S H ++ + T+PD SGRG K+ SPVK+ A ++ I II
Sbjct: 3 LKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPII 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ + K L + D+M+V+ ILP
Sbjct: 63 QPFSLRDEVEQEK--------LIAMNADVMVVVAYGLILP 94
>gi|313894884|ref|ZP_07828444.1| methionyl-tRNA formyltransferase [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976565|gb|EFR42020.1| methionyl-tRNA formyltransferase [Selenomonas sp. oral taxon 137
str. F0430]
Length = 316
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 122/308 (39%), Gaps = 68/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58
M+++F GT A I L +V ++T+PD GRG K+ SPVK +AL++ I
Sbjct: 4 MRVVFMGTPDFAVPIAAALAARPDLTEVVAVVTQPDRPRGRGKKVLASPVKAWALENRIP 63
Query: 59 IIQPISLK-----------------------------LNGKYHKIANETHKLLNK----- 84
++QP+ + L+ H N LL +
Sbjct: 64 VLQPVRARDAVFIEEMRALRPDVAVVAAFGQILPQELLDIPAHGCINVHASLLPRWRGAA 123
Query: 85 -IEFDIM---IVMGI--LPEDTSLTLQNKLEKLSKILIIDTIKKIEYD------------ 126
I+ +M V GI + D L + L + + + DT +D
Sbjct: 124 PIQHAVMAGDAVSGITTMQMDAGLDTGDMLLRRAVPITPDTTYGTLHDALMEMGAALIVE 183
Query: 127 ------MTKLFFKPQSNIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+L PQ+ GES YAP I + A +DWS A+ + + NP P Y
Sbjct: 184 TMEQLAAGRLVRTPQT--GESCYAPRITRETAQIDWSRPARQLDALVRGLNPVP-----Y 236
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ KI + H ++ PGTI++ + G++V G + + E+Q KK I
Sbjct: 237 AVTSHAGAVYKIGRLHGTGRPASAVPGTIVSADPKGGLIVAAGDEDVAVTEMQAPGKKMI 296
Query: 240 SATEFING 247
A ++ G
Sbjct: 297 EAAAYLRG 304
>gi|83642942|ref|YP_431377.1| methionyl-tRNA formyltransferase [Hahella chejuensis KCTC 2396]
gi|123753707|sp|Q2SQX2.1|FMT_HAHCH RecName: Full=Methionyl-tRNA formyltransferase
gi|83630985|gb|ABC26952.1| methionyl-tRNA formyltransferase [Hahella chejuensis KCTC 2396]
Length = 318
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 92 VMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEA 151
V I +DT TL ++L ++ I+ + ++ D KL + Q + +YA ++K EA
Sbjct: 156 VTPISADDTGRTLHDRLAQMGGEAIVKALALLQED--KLQAERQQDDLATYAHKLQKEEA 213
Query: 152 VLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNV 211
+DWS A I RKI AFNP+P T ++ + ++IW A A + S KPGTIL
Sbjct: 214 RIDWSEPASLIQRKIAAFNPWPVCFT-----EDNGQTIRIWAASASADMSKAKPGTILER 268
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ + V CG+ V+ + LQ K IS + ING
Sbjct: 269 SAE-AVKVACGEGVLSITSLQLPGGKPISCKDLING 303
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA+ L L ++ + IV + T+PD +GRG KL PVK+ ALKH+I +
Sbjct: 5 LKVIFAGTPDFAASALQALLDANYQIVAVYTQPDRPAGRGNKLLPGPVKQLALKHTIPVE 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP++ K E + L E D+M+V ILP+
Sbjct: 65 QPLNFK--------NEEDRQQLRDYEADVMVVAAYGIILPQ 97
>gi|310815111|ref|YP_003963075.1| methionyl-tRNA formyltransferase [Ketogulonicigenium vulgare Y25]
gi|385232663|ref|YP_005794005.1| methionyl-tRNA formyltransferase [Ketogulonicigenium vulgare
WSH-001]
gi|308753846|gb|ADO41775.1| methionyl-tRNA formyltransferase [Ketogulonicigenium vulgare Y25]
gi|343461574|gb|AEM40009.1| Methionyl-tRNA formyltransferase, putative [Ketogulonicigenium
vulgare WSH-001]
Length = 298
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS L +L ++ +IIDT+++ + L + Q G +YA I K EA++DW+
Sbjct: 159 DTSGDLHQRLSQMGARMIIDTLER----LGGLIPQVQPEDGVTYAAKIDKAEALVDWTRP 214
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A T+ R+IN +PFPGA + + + K L+ A ++ T GT+L +G
Sbjct: 215 APTVARQINGLSPFPGA--WCMIGDERVKLLR-----AEAVPGTAAAGTVL-----DGFT 262
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG +++L++Q+ K+ + + + G
Sbjct: 263 VACGSGALRVLDIQREGKRAMPVADALLG 291
>gi|165918163|ref|ZP_02218249.1| methionyl-tRNA formyltransferase [Coxiella burnetii Q321]
gi|165918023|gb|EDR36627.1| methionyl-tRNA formyltransferase [Coxiella burnetii Q321]
Length = 314
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ L ++L + L+++++ K+E KL + Q +YA I+K EA+++W
Sbjct: 160 EDTAADLHDRLSLIGADLLLESLAKLEKGDIKL--EKQDEASATYASKIQKQEALINWRK 217
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA I R++ AFNP P A TY+ + + ++IW+A + ++ +PG +++ + GI
Sbjct: 218 SAVEIARQVRAFNPTPIAFTYF-----EGQPMRIWRATVVDEKTDFEPGVLVDAD-KKGI 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ G +++L +LQ K+ SA +FIN
Sbjct: 272 SIAAGSGILRLHQLQLPGKRVCSAGDFIN 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+FAGT A L L +S H ++ + T+PD SGRG K+ SPVK+ A ++ I II
Sbjct: 3 LKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPII 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ + K L + D+M+V+ ILP
Sbjct: 63 QPFSLRDEVEQEK--------LIAMNADVMVVVAYGLILP 94
>gi|254447491|ref|ZP_05060957.1| methionyl-tRNA formyltransferase [gamma proteobacterium HTCC5015]
gi|198262834|gb|EDY87113.1| methionyl-tRNA formyltransferase [gamma proteobacterium HTCC5015]
Length = 319
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 128/312 (41%), Gaps = 75/312 (24%)
Query: 2 KIIFAGTSISAAAILDTL--YNSEHNI--VLILTKPDLHSGRGMKLNFSPVKK------- 50
+I++AGT A L+ L EHNI V + T+PD +GRG +L SPVK+
Sbjct: 5 RIVYAGTPDFAVPALEQLIAARDEHNIDIVGVYTQPDRPAGRGRQLKPSPVKQCALDHQL 64
Query: 51 -----------------------------YALKHSIKIIQ-------------------- 61
Y L + ++Q
Sbjct: 65 PVFQPEHFKDSNAQRQLTELAPDLMVVAAYGLLLPLSVLQTPRMGCVNLHASLLPRWRGA 124
Query: 62 -PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGILPEDTSLT---LQNKLEKLSKILII 117
PI + + ++ ++ M+ +P D + T L ++L +L L+
Sbjct: 125 APIQRAIEAGDSETGITLMQMAEGLDTGDMLAKATVPIDETTTGGRLHDQLAELGGQLLK 184
Query: 118 DTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
+ ++ +L + Q + +YA + K EA + WS SA I R+I AFNP+P A T
Sbjct: 185 THLSELLS--GQLNGEAQEDALSNYARKLDKAEANIVWSDSALAIARRIRAFNPWPVAST 242
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL---ELQKN 234
Y L++W A A + PGT+L N H GI+V CG++ + L +LQ+
Sbjct: 243 RY-----SDGALRLWLATAADNGAATTPGTVLQCNKH-GIVVSCGEDGSQRLNISQLQRP 296
Query: 235 NKKKISATEFIN 246
K + A+ F N
Sbjct: 297 GGKPMDASAFAN 308
>gi|310828896|ref|YP_003961253.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308740630|gb|ADO38290.1| hypothetical protein ELI_3328 [Eubacterium limosum KIST612]
Length = 313
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 133/307 (43%), Gaps = 67/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+ GT+ A L+ L + H++ ++ +PD + RG K+ F PVK+ AL+ I ++
Sbjct: 4 LRIVLMGTTDFAVPALNKLVEAGHDVAAVVAQPDRPNQRGKKIKFLPVKQRALELGIPVL 63
Query: 61 QPISLK-------------------------------------------LNGKYHKIA-- 75
QP +K L KY A
Sbjct: 64 QPERIKVPEVVEELRALKADVFVVAAYGQILSEEILFMPPLGSVNIHGSLLPKYRGAAPV 123
Query: 76 ------NETHKLLNKIEFDIMIVMGIL------PEDTSLT---LQNKLEKLSKILIIDTI 120
ET + ++ DI + G + P D T L + L + L++DT+
Sbjct: 124 HHAIIDGETESGVTIMKMDIGMDTGDMLSKVSVPIDAKTTVGYLHDLLAEKGAELLLDTL 183
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + + + + K N+ +YA ++K LDW+ ++ I+R+IN +PFPGA Y
Sbjct: 184 ESLS-NGSAIPEKQDENMA-TYADKVEKTTGKLDWNQTSFKILRRINGTDPFPGA---YT 238
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
+K +K + +L + PGT+L + +G++V G + + E+Q KK++
Sbjct: 239 ELNGEK--IKCFAPESLDYSGEELPGTVLQADTKHGLVVKTGDGALAVGEIQMPGKKRML 296
Query: 241 ATEFING 247
+ + NG
Sbjct: 297 SKVYFNG 303
>gi|407799662|ref|ZP_11146540.1| methionyl-tRNA formyltransferase [Oceaniovalibus guishaninsula
JLT2003]
gi|407058139|gb|EKE44097.1| methionyl-tRNA formyltransferase [Oceaniovalibus guishaninsula
JLT2003]
Length = 299
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+DT+ L ++L L LI+ + + M L PQ G +YA I K EA +D
Sbjct: 155 IGPDDTAGDLHDRLSVLGATLIVTALDR----MGALPDMPQPETGATYAAKIDKAEARID 210
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ A+ + R+I A +P PGA + ++ + K L+ A +++ PG +L
Sbjct: 211 WTRPAQDVARQIRAMSPHPGA--WCMAGDERLKLLR-----ARAVQGQGAPGQVL----- 258
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G + CG I++ E Q+ + + A E + G
Sbjct: 259 DGFRIACGIGAIEVREAQREGRGAMPAAEILRG 291
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT + LD L + H+I + T+P +GRG + SPV++ A + +
Sbjct: 1 MRVVFMGTPAFSVPALDALVQAGHDIAAVYTQPPRPAGRGKRDRPSPVQQRAEALGLPVR 60
Query: 61 QPISLKLNGKYHKIA 75
P +LK + +A
Sbjct: 61 SPATLKTDAAQADMA 75
>gi|409100644|ref|ZP_11220668.1| methionyl-tRNA formyltransferase [Pedobacter agri PB92]
Length = 302
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 72/309 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A A LD L + ++V ++T PD +GRG K+N S VKKYA++ +I ++
Sbjct: 1 MKIVFMGTPDFAVASLDALVQANFDVVAVITAPDKPAGRGQKMNESAVKKYAIEKNIPVL 60
Query: 61 QPISLK--------------------------------------LNG----KYHKIANET 78
QP LK L+G +Y A
Sbjct: 61 QPEKLKNPEFLEQLKAYQADLQVVVAFRMLPEVVWNMPPKGTINLHGSLLPQYRGAAPIN 120
Query: 79 HKLLN--------------KIEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTIK 121
H ++N +I+ +I P E+T+ L +KL + L++ T+
Sbjct: 121 HAVINGEKESGVTTFFLTHEIDTGAIIQSASTPISDEETAGDLHDKLMHIGAELLVKTVT 180
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
IE +PQ+++ +AP I K++ ++W+ S++ I I +P+P A T
Sbjct: 181 AIEKGDYTEQPQPQNDV-LKHAPKIFKDDCKINWNNSSQQIFNLIRGLSPYPTAFTLL-- 237
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNG---ILVVCGKNVIKLLELQKNNKKK 238
K LKI+KA K+P + +G + IKLL++Q KK+
Sbjct: 238 ---NDKTLKIFKAEL----EDKEPAIVAGGFLTDGKTYLKFATKDGFIKLLDIQYEGKKR 290
Query: 239 ISATEFING 247
++ +F+ G
Sbjct: 291 MAIEDFLRG 299
>gi|420143338|ref|ZP_14650839.1| Methionyl-tRNA formyltransferase [Lactococcus garvieae IPLA 31405]
gi|391856857|gb|EIT67393.1| Methionyl-tRNA formyltransferase [Lactococcus garvieae IPLA 31405]
Length = 317
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 70/313 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
KIIF GT + +L L +S+ ++I+ ++T+PD GR +L +PVK+ ALK +KI+
Sbjct: 5 KIIFMGTPQFSQTVLQGLIDSQRYDILAVVTQPDRKVGRKQELRQTPVKELALKADLKIL 64
Query: 61 QPISLKLNGKYHKI----ANET------------HKLLNKIEFDIMIVMGILP------- 97
QP L + + ++ A KLL+++ F + + +LP
Sbjct: 65 QPEKLSGSPEMEELLAFGAQGAGIVTAAFGQFLPGKLLDEMAFAVNVHASLLPKYRGGAP 124
Query: 98 --------------------------------------EDTSLTLQNKLEKLSKILIIDT 119
ED T+ KL + + L+++T
Sbjct: 125 IHYAIMNGEKEAGVTIMEMVRKMDAGDMVAKASTPILEEDNVGTMFEKLAVVGRDLLLET 184
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ Y ++ + Q +++P I E +DW+ S + I +I NPFP A T +
Sbjct: 185 LPL--YVAGEIKPEAQDETQATFSPNISPEEEKIDWTKSNRQIFNQIRGMNPFPVAHTTW 242
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
N+ +F KI+ + + E + G I++ ++V G ++LLE+Q K K+
Sbjct: 243 ----NEGRF-KIYDSRPIDTEKNGQAGEIID-KTKKSLIVATGSGALELLEVQPAGKPKM 296
Query: 240 SATEFINGCIKNI 252
F+NG + +
Sbjct: 297 DIVSFLNGLGQKV 309
>gi|167628042|ref|YP_001678542.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189044511|sp|B0U0T8.1|FMT_FRAP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|167598043|gb|ABZ88041.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 312
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 62/303 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ I+FAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ A+ ++ ++
Sbjct: 4 LNIVFAGTPDISAQVLKDLYQSQHNIQAVLTQPDRAKGRGKKIQFSPVKEVAIANNTLVL 63
Query: 61 QPISLKLNGKYHKIANE---------THKLLNKIEF-DIM------IVMGILPE------ 98
QP+S K + + + E + ++ EF DI I + +LP+
Sbjct: 64 QPLSFKKDPQVLEQIRELKPDVIVVIAYGIIVPQEFLDIPKYGCLNIHVSLLPKWRGAAP 123
Query: 99 -------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLFFKP---- 134
D L + L L +I DT + + KL KP
Sbjct: 124 IQRAIQAGDSKTGICIMQMDAGLDTGDILNTLEVEIQDTDTSQSLHDKFAKLSIKPLLET 183
Query: 135 ---------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
Q GE +YA I K E ++D++ SAK I I AF P+P A + +
Sbjct: 184 LENIDTIKPQPQQGEPTYAHKITKQEGLIDFTKSAKEISCHIRAFTPWPSA---FFMLEG 240
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
++ +K+ L + + I+++ NG + +I+ +LQ NKK ++ +
Sbjct: 241 EQ--VKVGDFEILEKSANDEVTAIIDIT-KNGFDIATNDKIIRFKQLQFPNKKMLNIADI 297
Query: 245 ING 247
+NG
Sbjct: 298 LNG 300
>gi|346991576|ref|ZP_08859648.1| methionyl-tRNA formyltransferase [Ruegeria sp. TW15]
Length = 304
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 119/307 (38%), Gaps = 75/307 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIF GT + +L+ L + H IV + +P +GRG K PV +++
Sbjct: 1 MRIIFMGTPDFSVPVLNALVKAGHEIVAVYCQPPRPAGRGKKDRPPPVHARGEALGLEVR 60
Query: 61 QPISLKLNGKYHKIAN----------------------ETHKLLN--------------- 83
P SLK + + A TH LN
Sbjct: 61 HPTSLKTPEEQDRFATLNADVAVVVAYGLILPQPILDVPTHGCLNIHASLLPRWRGAAPI 120
Query: 84 ----------------KIEFDIMIVMGILPEDTSLTLQ-------NKLEKLSKILIIDTI 120
++E + +L E T + ++ ++L + LI++ +
Sbjct: 121 HRAIMAGDAQTGICIMQMEAGLDTGPVLLREATEIGIEETTAQLHDRLSDMGAALIVEAL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
++ L PQ G +YA I K EA +DWS A + RKI +PFPGA T
Sbjct: 181 AELH----GLTPDPQPEDGVTYAAKIDKAEARIDWSAPAPEVDRKIRGLSPFPGAWTEV- 235
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++ K L A L+ E PG +L+ + + V CG+ ++LL LQ+ K
Sbjct: 236 -EGDRIKLL----ASRLA-EGQGTPGEVLD----DHLCVACGEGAVELLRLQRAGKGAQD 285
Query: 241 ATEFING 247
F+ G
Sbjct: 286 RETFLRG 292
>gi|283797832|ref|ZP_06346985.1| methionyl-tRNA formyltransferase [Clostridium sp. M62/1]
gi|291074520|gb|EFE11884.1| methionyl-tRNA formyltransferase [Clostridium sp. M62/1]
Length = 312
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 123/308 (39%), Gaps = 69/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH----- 55
MK+++ GT A L L + H + ++T+PD GRG + +PVK+ AL +
Sbjct: 1 MKLVYMGTPDFAVPPLTALVEAGHEVAAVVTQPDKPKGRGKAVLMTPVKEKALSYGIPVY 60
Query: 56 -------------SIKIIQP--------------------------ISLKLNGKYHKIA- 75
+++ I P I L KY A
Sbjct: 61 QPARIKKDEEFLKTLREINPDAIVVAAFGQILPKEILELPKYGCVNIHASLLPKYRGAAP 120
Query: 76 -------NETHKLLNKIEFDIMIVMG------ILP---EDTSLTLQNKLEKLSKILIIDT 119
E + + D+ + G ++P ++T +L KL + LI+ T
Sbjct: 121 IQWAVIDGEKESGITTMMMDVGLDTGDMLDRTVIPLAEDETGGSLFEKLSRAGGPLILKT 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
++ +E +P+ G +YA ++ K+ +DW+ SA I R I NP+P A T Y
Sbjct: 181 LEALENGTAVRTKQPEE--GATYAGMLDKSLGNIDWTQSAAKIERLIRGLNPWPSAYTGY 238
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
K K +K+W A L PG I+ V LV G + + ELQ KK++
Sbjct: 239 -----KGKTMKLWAADVLEGTFEGVPGEIIKVEKER-FLVRTGDGALAVKELQLEGKKRM 292
Query: 240 SATEFING 247
A F+ G
Sbjct: 293 DAASFLRG 300
>gi|444334814|ref|ZP_21150261.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype a str.
A160]
gi|443549860|gb|ELT58441.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype a str.
A160]
Length = 769
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI P++TS L KL +++ +++ + + D T + Q
Sbjct: 146 DTGDMLHKVYCDIT------PQETSAGLYAKLAEVAPAALVEVLDHLT-DGT-FTAERQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 198 DAQSSYAEKLSKEEAKLNWQLSAVQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI +V V+ LL+LQ + KK +SA + +NG
Sbjct: 258 LP-HTNKAPGTILSADKH-GIQIVTVDGVLNLLQLQPSGKKPMSAQDLLNG 306
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 96
>gi|440232806|ref|YP_007346599.1| methionyl-tRNA formyltransferase [Serratia marcescens FGI94]
gi|440054511|gb|AGB84414.1| methionyl-tRNA formyltransferase [Serratia marcescens FGI94]
Length = 314
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Query: 88 DIM--IVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPL 145
D+M I I DTS +L +KL +L ++ T++++ + + ++ + +YA
Sbjct: 150 DMMHKIACPIEATDTSASLYDKLAELGPQGLLATLQQMADGTAQREVQDEALV--TYAEK 207
Query: 146 IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKK 204
+ K EA LDW LSA + R + AFNP+P ISY ++ +K+W+A AL+ + +
Sbjct: 208 LSKEEARLDWRLSAAQLERCVRAFNPWP------ISYFTVDEQPVKVWQAQALTGGNGAE 261
Query: 205 PGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
PGTIL + H GI V + ++ L +LQ KK +SA + +N
Sbjct: 262 PGTILQADKH-GIQVATAEGILCLTQLQPAGKKPMSAQDLLN 302
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAGRGNKLTPSPVKVLAQQHQLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ ++ D+M+V+ ILP
Sbjct: 65 QPKSLRPEENQHLVAD--------LQADVMVVVAYGLILP 96
>gi|334702670|ref|ZP_08518536.1| methionyl-tRNA formyltransferase [Aeromonas caviae Ae398]
Length = 314
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I ++TS +L +KL L ++DT+ + T +PQ + +YA + K EA +D
Sbjct: 158 IASDETSASLYDKLAGLGPQALVDTLDAMAAGDTA--AEPQDDALANYAEKLSKEEARID 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNF 213
WS+ A I R I AFNP+P IS+ + + +K+W+A ++ + + GT+L +
Sbjct: 216 WSMDAVAIERCIRAFNPWP------ISWFDVAGQTVKVWQAEVVAQDHGQAAGTLLKAD- 268
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V G+ V++LL LQ KK +S ++ +N
Sbjct: 269 KQGIEVATGQGVLRLLTLQPPGKKAMSVSDLLN 301
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 13/101 (12%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L +S H +V + T+PD +GRG KL SPVK+ AL H + +
Sbjct: 4 LKLIFAGTPDFAARHLAALLSSGHEVVAVYTQPDKPAGRGQKLTASPVKELALAHDLPVY 63
Query: 61 QPISLKLNGKYHKIANETHKL-LNKIEFDIMIVMG---ILP 97
QP SL+ NE + L + D+M+V+ ILP
Sbjct: 64 QPASLR---------NEAAQTELAALGADLMVVVAYGLILP 95
>gi|387927085|ref|ZP_10129764.1| methionyl-tRNA formyltransferase [Bacillus methanolicus PB1]
gi|387589229|gb|EIJ81549.1| methionyl-tRNA formyltransferase [Bacillus methanolicus PB1]
Length = 318
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL L + I+ ++T+PD GR L PVK A KH I + Q
Sbjct: 3 KIVFMGTPDFSVPILQQLIQDGYEIIGVVTQPDRPVGRKKILTPPPVKVEAEKHGIPVFQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P ++ + KI L+ F I + +LPE
Sbjct: 63 PEKIRNPEELEKILALEPDLIVTAAFGQILPKELLEAPKYGCINVHASLLPELRGGAPIH 122
Query: 99 --------DTSLTLQNKLEKL--------SKILII--DTIKKIEYDMTKLFFK------- 133
T +T+ +EKL S+++I DT+ + +++ K
Sbjct: 123 YAILEGKKKTGITIMYMVEKLDAGDILTQSEVMITDEDTVGTLHDKLSETGAKLLSETIP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ+ + A IK+ + +DWS S + I I NP+P A T
Sbjct: 183 KLIKGELKPVPQNEEEATLAYNIKREQERIDWSKSGEEIYNHIRGMNPWPVAYTTM---- 238
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
LKIW+ + + +PGTIL ++ +GI+V G + IK+ ELQ + KK+++A
Sbjct: 239 -NHSVLKIWRGEKVPAKVKSEPGTILAIS-KDGIIVSTGDDTAIKITELQPSGKKRMTAE 296
Query: 243 EFINGCIKNI 252
+F++G I
Sbjct: 297 QFLHGGGSQI 306
>gi|419802855|ref|ZP_14328035.1| methionyl-tRNA formyltransferase [Haemophilus parainfluenzae HK262]
gi|419845527|ref|ZP_14368794.1| methionyl-tRNA formyltransferase [Haemophilus parainfluenzae
HK2019]
gi|385189095|gb|EIF36564.1| methionyl-tRNA formyltransferase [Haemophilus parainfluenzae HK262]
gi|386415395|gb|EIJ29927.1| methionyl-tRNA formyltransferase [Haemophilus parainfluenzae
HK2019]
Length = 318
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI ++TS +L KL +++ ++ID + +E K + Q
Sbjct: 146 DTGDMLHKVYCDID------DQETSASLYYKLAEIAPSVLIDVLDHLEE--GKFIAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDWSLSA + R I AFNP+P + Q ++ LK++ A
Sbjct: 198 DSQSNYAEKLSKEEAKLDWSLSAAQLERNIRAFNPWPISFLQLTDEQGNEQTLKVYAATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L K GTIL+V+ GI + + V+ LL+LQ KK +S +F+NG
Sbjct: 258 LP-HVDKPAGTILSVD-KKGIQIATKEGVLNLLQLQPAGKKPMSVQDFLNG 306
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HNI+ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAAQHLTALLNSHHNIIAVYTQPDKPAGRGKKLQASPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E L + D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KEEAQAELKALNADVMVVVAYGLILPQ 96
>gi|385786293|ref|YP_005817402.1| methionyl-tRNA formyltransferase [Erwinia sp. Ejp617]
gi|310765565|gb|ADP10515.1| methionyl-tRNA formyltransferase [Erwinia sp. Ejp617]
Length = 315
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS TL +KL L ++ T+ ++ + + +S + SYA + K EA LDWSLS
Sbjct: 163 DTSATLYDKLADLGPAGLLTTLAQLAGGSARPQMQDESLV--SYAEKLSKEEARLDWSLS 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ + R I AFNP+P +Y++ ++ +K+WKA L + +PG IL + GI
Sbjct: 221 AEQLERCIRAFNPWP--VSYFVV---DEQPVKVWKASVLPAVNGHQPGEILQAD-KQGIQ 274
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFIN 246
VV V+ + ELQ KK + A + +N
Sbjct: 275 VVTADGVLNIEELQPAGKKAMKAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA LD L +S H +V + T+PD +GRG K+ SPVK+ A +H+I +
Sbjct: 5 LNIIFAGTPDFAARHLDALLSSGHRVVGVFTQPDRPAGRGNKVTASPVKQLAEQHNIAVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ + E +L+ + D+M+V+ ILP
Sbjct: 65 QPASLR--------SEENQQLVAALNADVMVVVAYGLILP 96
>gi|410692112|ref|YP_003622733.1| Methionyl-tRNA formyltransferase [Thiomonas sp. 3As]
gi|294338536|emb|CAZ86865.1| Methionyl-tRNA formyltransferase [Thiomonas sp. 3As]
Length = 331
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL +KL L L++ + +E +L +PQ G +YA I K+E++L W L
Sbjct: 180 DTASTLHDKLAVLGAALVVQGLDALERG--ELRPRPQPEAGVTYAAKISKDESLLQWDLP 237
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ + R++ AF P+PG + +K+ A AL+ PG + + G+
Sbjct: 238 AELLARRVRAFTPWPGTQFTL----PDGGVVKVGAAEALTAPHVGPPGLVRQMT-AEGLD 292
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
VVCG V+++ LQK S +++ G
Sbjct: 293 VVCGSGVLRITRLQKPGGTMQSVAQWLQG 321
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++ FAGT AA L + ++ + + L+LT+PD +GRGMKL SPVK+ A I++I
Sbjct: 14 LRVAFAGTPEFAAVALRAILSAGYTVPLVLTQPDRPAGRGMKLQSSPVKQVASAAQIEVI 73
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP L+L+G+Y + A + H L + D+++V
Sbjct: 74 QPQGLRLDGRYAEQAAQAHAALRAAQADVLVV 105
>gi|167621967|ref|YP_001672261.1| methionyl-tRNA formyltransferase [Shewanella halifaxensis HAW-EB4]
gi|189044559|sp|B0TLC9.1|FMT_SHEHH RecName: Full=Methionyl-tRNA formyltransferase
gi|167351989|gb|ABZ74602.1| methionyl-tRNA formyltransferase [Shewanella halifaxensis HAW-EB4]
Length = 321
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS TL KL + +I+ + I D L + Q +YA + K EA LDWS S
Sbjct: 162 DTSATLYEKLAEQGPSALIEALAGIAQD--SLPAEKQDESLANYAEKLSKEEARLDWSKS 219
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R+I AFNP+P Y+++ +K+W++H S+K PGTIL+ + NGI
Sbjct: 220 ATALWREIRAFNPWP-----VSHYEHEGNTIKVWQSHVSDETSSKLPGTILSAD-KNGIS 273
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFIN 246
+ G+ V+ + ++Q KK +S + +N
Sbjct: 274 IATGEGVLIITQMQLPGKKPLSVADILN 301
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ +IFAGT AA L L +SEHN++ + T+PD +GRG KL SPVK AL++ I +
Sbjct: 4 LNVIFAGTPDFAARHLQALIDSEHNVIAVYTQPDRPAGRGKKLQASPVKALALENGIAVF 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ + L + DIM+V+ ILP
Sbjct: 64 QPKSLR--------DEDAQAELTALNADIMVVVAYGLILP 95
>gi|295091955|emb|CBK78062.1| methionyl-tRNA formyltransferase [Clostridium cf. saccharolyticum
K10]
Length = 312
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 123/308 (39%), Gaps = 69/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH----- 55
MK+++ GT A L L + H + ++T+PD GRG + +PVK+ AL +
Sbjct: 1 MKLVYMGTPDFAVPPLTALVEAGHEVAAVVTQPDKPKGRGKAVLMTPVKEKALSYGIPVY 60
Query: 56 -------------SIKIIQP--------------------------ISLKLNGKYHKIA- 75
+++ I P I L KY A
Sbjct: 61 QPARVKKDEEFLKTLREINPDAIVVAAFGQILPKEILELPKYGCVNIHASLLPKYRGAAP 120
Query: 76 -------NETHKLLNKIEFDIMIVMG------ILP---EDTSLTLQNKLEKLSKILIIDT 119
E + + D+ + G ++P ++T +L KL + LI+ T
Sbjct: 121 IQWAVIDGEKESGITTMMMDVGLDTGDMLDRTVIPLAEDETGGSLFEKLSRAGGPLILKT 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
++ +E +P+ G +YA ++ K+ +DW+ SA I R I NP+P A T Y
Sbjct: 181 LEALENGTAVRTKQPEE--GATYAGMLDKSLGNIDWTQSAAKIERLIRGLNPWPSAYTGY 238
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
K K +K+W A L PG I+ V LV G + + ELQ KK++
Sbjct: 239 -----KGKTMKLWAADVLKGTFEGVPGEIIKVEKER-FLVRTGDGALAVKELQLEGKKRM 292
Query: 240 SATEFING 247
A F+ G
Sbjct: 293 DAASFLRG 300
>gi|429462984|ref|YP_007184447.1| methionyl-tRNA formyltransferase [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451811766|ref|YP_007448221.1| methionyl-tRNA formyltransferase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338498|gb|AFZ82921.1| methionyl-tRNA formyltransferase [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451776924|gb|AGF47923.1| methionyl-tRNA formyltransferase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 322
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
++ +L PQS G SYA I+K+E++L++S A ++ RKI AFNPFPG S+
Sbjct: 186 NINELPVNPQSEDGVSYAKKIEKSESILNFSNDALSLERKIRAFNPFPGVIIRLPSFD-- 243
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
K +K+W+A A++ G I +++ + GI + GK +++L E+QK+ K SA++FI
Sbjct: 244 -KPIKVWQALAINSSFEGPSGVITDISVNQGIDISTGKGILRLKEVQKSGCNKCSASDFI 302
Query: 246 NG 247
G
Sbjct: 303 RG 304
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGTS A L L + ++I + T+PD SGRGM L+ SPVKK AL+ +K+
Sbjct: 1 MRIIFAGTSDFARFHLAHLLSLGYDITSVFTQPDRPSGRGMHLSSSPVKKLALEAGLKVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP +L ++++ L K DI+IV+ ILP
Sbjct: 61 QPSNL----NQECLSDDIRDFLTKEVPDIVIVVAYGLILP 96
>gi|404481893|ref|ZP_11017122.1| methionyl-tRNA formyltransferase [Clostridiales bacterium OBRC5-5]
gi|404344863|gb|EJZ71218.1| methionyl-tRNA formyltransferase [Clostridiales bacterium OBRC5-5]
Length = 312
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 134/313 (42%), Gaps = 77/313 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT + L L + H + L+LT+ D RG +L+ +PVK+ AL +I ++
Sbjct: 1 MKIVFMGTPDFSVEPLKALVKAGHEVSLVLTREDKKRNRG-ELSPTPVKELALSLNIPVL 59
Query: 61 QPISLKLNGKYHKIANET---------HKLLNKIEFDIM------IVMGILPE------- 98
P +K ++ +E K+L K DI I +LPE
Sbjct: 60 TPSKMKEEALIDRLKSENADFFVVVAYGKILPKAVLDIPKFGCINIHASLLPEYRGAAPI 119
Query: 99 --------------------------------------DTSLTLQNKLEKLSKILIIDTI 120
+T +L +KL L I+DTI
Sbjct: 120 QWSIVDGKEKTGITTMLMDEGLDTGDILKQYEINIDKKETGGSLFDKLAVLGGEAIVDTI 179
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + PQ YA +I KN +D++ SA I R I NP+P A T Y
Sbjct: 180 ANFD----SIVPTPQGEATTEYAKMISKNMGEIDFNKSAVEIERLIRGMNPWPSAYTRY- 234
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVN------FHNGILVVCGKNVIKLLELQKN 234
+ K LKIW+A ++ ++ P L+ N F++ I ++C ++++++L LQ
Sbjct: 235 ----QGKVLKIWEAE-VAENISELPNINLSENYGKIYSFNSRIFIICNQSILEVLSLQLE 289
Query: 235 NKKKISATEFING 247
KK++SA +F+ G
Sbjct: 290 GKKRMSAKDFLMG 302
>gi|319780349|ref|YP_004139825.1| methionyl-tRNA formyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166237|gb|ADV09775.1| methionyl-tRNA formyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 317
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 135/318 (42%), Gaps = 82/318 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR-GMKLNFSPVKKYALKHSIKI 59
+++IF GT + L + + H I + T+P +GR G++L SPV++ A + I++
Sbjct: 3 LRVIFMGTPEFSVPTLRAIAEAGHEISAVYTQPPRAAGRRGLELTPSPVQREAERLGIEV 62
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP----EDTSLTLQNKLEKL- 111
P+SLK G+ + A ++ D+ +V+ +LP E T L N L
Sbjct: 63 RTPVSLK--GEAEQAA------FRALQADVAVVVAYGLLLPKAVLEATRLGCVNGHASLL 114
Query: 112 -------------------SKILI------IDT-----IKK--IEYDMTK---------- 129
S +++ +DT ++K IE DMT
Sbjct: 115 PRWRGAAPIQRAIMAGDLESGMMVMRMEEGLDTGPVGLVEKCAIEPDMTAGDLHDRLMSV 174
Query: 130 ----------------LFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFP 173
L F Q+ G +YA I K+E +DW+ SA + I +PFP
Sbjct: 175 GAALMVEALARLEGNTLTFTTQAVDGVTYAKKIDKSETRVDWTRSASEVHNHIRGLSPFP 234
Query: 174 GA--KTYYISYQNKKKFLKIWKAHALSI-ESTKKPGTILNVNFHNGILVVCGKNVIKLLE 230
GA + Q + K L+ + LS E + G IL+ + + V CG I+L+E
Sbjct: 235 GAWSEIGIGGRQERLKLLRSTLSQGLSPSEDLGESGGILD----DRLTVACGAGAIRLVE 290
Query: 231 LQKNNKKKISATEFINGC 248
+Q+ K +A+EF+ G
Sbjct: 291 VQRAGGKPAAASEFLRGA 308
>gi|27383219|ref|NP_774748.1| methionyl-tRNA formyltransferase [Bradyrhizobium japonicum USDA
110]
gi|33516861|sp|Q89BP0.1|FMT_BRAJA RecName: Full=Methionyl-tRNA formyltransferase
gi|27356393|dbj|BAC53373.1| methionyl-tRNA formyl transferase [Bradyrhizobium japonicum USDA
110]
Length = 311
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 13/150 (8%)
Query: 100 TSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSA 159
T+ L ++L +L L++ + + D L K QS G +YA I K EA +DW+ A
Sbjct: 163 TAADLHDRLSRLGADLMVRAMAAL--DRGGLQLKKQSEDGVTYAAKIDKAEARIDWTKPA 220
Query: 160 KTIMRKINAFNPFPG--AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
+ ++R I+ +PFPG A+ +S + K L+ A + + PG +L+ + +
Sbjct: 221 RAVLRHIHGLSPFPGAWAELAGVSENARVKILRCELA-----KGSGAPGEVLD----DQL 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ CG+ I+++ELQ+ K ++ AT+F+ G
Sbjct: 272 TIACGEGAIRIIELQREGKARMQATDFLRG 301
>gi|239826565|ref|YP_002949189.1| methionyl-tRNA formyltransferase [Geobacillus sp. WCH70]
gi|259646036|sp|C5D8R6.1|FMT_GEOSW RecName: Full=Methionyl-tRNA formyltransferase
gi|239806858|gb|ACS23923.1| methionyl-tRNA formyltransferase [Geobacillus sp. WCH70]
Length = 318
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 65/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K++F GT + IL L +NI ++T+PD GR +L PVK A KH I ++
Sbjct: 2 IKVVFMGTPDFSVPILKQLIEDGYNIAAVVTQPDKPKGRKRELTPPPVKVEAEKHGIPVL 61
Query: 61 QPISLKLNGKYHK---------IANETHKLLNKIEFD------IMIVMGILPE------- 98
QP ++ +Y + + ++L K D I + +LPE
Sbjct: 62 QPTKIREKEQYEQVLAFKPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGGAPI 121
Query: 99 ---------DTSLTLQNKLEKLS----------KILIIDTI----KKIEYDMTKLFFK-- 133
T +T+ +EKL I DT+ K+ KL +
Sbjct: 122 HYAILQGKTKTGVTIMYMVEKLDAGDILTQVEVPITETDTVGTLHDKLSIAGAKLLSETI 181
Query: 134 PQSNIGE-----------SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
PQ G+ +YA IK+ + +DW+ + I I +P+P A T +
Sbjct: 182 PQLVAGKLTPIKQDDEKATYAYNIKREQEKIDWTKPGEDIYNHIRGLHPWPVAYTTFAG- 240
Query: 183 QNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCG-KNVIKLLELQKNNKKKISA 241
K+W + +PGTI+++ +GI+V G + IK+ ELQ KK+++A
Sbjct: 241 ----NVWKVWWGEKVPAPKKAEPGTIIDI-VQDGIVVATGNETAIKITELQPAGKKRMNA 295
Query: 242 TEFINGC 248
+F+ G
Sbjct: 296 AQFLRGA 302
>gi|386347803|ref|YP_006046052.1| Methionyl-tRNA formyltransferase [Spirochaeta thermophila DSM 6578]
gi|339412770|gb|AEJ62335.1| Methionyl-tRNA formyltransferase [Spirochaeta thermophila DSM 6578]
Length = 325
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 125/307 (40%), Gaps = 68/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT A L + S +V +LT PD GRG +L PVK+ AL+ +++
Sbjct: 9 LRVLFAGTPAFAVPSLRAV-ASRFPVVGVLTNPDAPRGRGRRLQSPPVKEEALRLGLRVF 67
Query: 61 QPISL------------------------------------------KLNGKYHKIANET 78
QP L L KY A
Sbjct: 68 QPERLDAAFREQVARLAPDILVVVAYGKIFGPKFLALFPKGGINLHPSLLPKYRGPAPIP 127
Query: 79 HKLLNKIE---------FDIMIVMG--ILPEDTSLTLQNKLEKLS-------KILIIDTI 120
+LN +E D+ + G IL E SLT + E LS L+++ +
Sbjct: 128 AAILN-LEPETGITVQKLDLRMDAGDIILQERISLTGRETSESLSLWASERGAELLVEAL 186
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
IE K PQ +Y L+KK + ++ W +A I K+ AF P+P A T
Sbjct: 187 HLIEEG--KATPVPQDETAATYCALLKKEDGLILWEETAVRIDAKVRAFYPWPRAYTSL- 243
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
N+ + + E+ PGT+ V+ GIL+ GK ++ +L+LQ+ + +
Sbjct: 244 ---NQHRLYLLETVPLEDREADASPGTVAGVDKDYGILIQTGKGLLGVLKLQREGRNPLG 300
Query: 241 ATEFING 247
EF+NG
Sbjct: 301 WKEFLNG 307
>gi|154485070|ref|ZP_02027518.1| hypothetical protein EUBVEN_02793 [Eubacterium ventriosum ATCC
27560]
gi|149734023|gb|EDM50142.1| methionyl-tRNA formyltransferase [Eubacterium ventriosum ATCC
27560]
Length = 308
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 131/306 (42%), Gaps = 67/306 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT + L+ L H +V ++T+ D GRG K+ ++PVK+ AL+ +I +
Sbjct: 1 MKIVFMGTPDFSVPALEELAKV-HQVVAVITQQDRPKGRGHKMQYTPVKEKALELNIPVY 59
Query: 61 QPISLKLNGKYHKIANETH----------KLLNKIEFD------IMIVMGILP------- 97
QP +K N ++ I E + ++L+K D I + +LP
Sbjct: 60 QPEKVK-NPEFVDILREINPDVIVVIAFGQILSKEILDLPKYGCINVHASLLPKYRGAAP 118
Query: 98 ---------EDTSLTLQNKLEKLSKILIIDT--------------IKKIEYDMTKLFFK- 133
E+T +T E L +IDT K+ + KL +
Sbjct: 119 IQWAVIDGEEETGVTTMYMAEGLDTGDVIDTAVIKLDEKETGGSLFDKLAIEGGKLIVET 178
Query: 134 ------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
PQ + SYA I K +D++ A TI R I NP+P A T
Sbjct: 179 LSKLENGTATRTPQDDEKSSYAGKITKELGQIDFTKPAVTIERLIRGLNPWPSAYTTL-- 236
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
K +K+W A T++PG I+ + H I V G+N +K+ E+Q KK++
Sbjct: 237 ---DGKAMKVWDATVEEGNVTEQPGEIVEIAKHY-IKVATGENYLKINEIQLAGKKRMPM 292
Query: 242 TEFING 247
F+NG
Sbjct: 293 DAFLNG 298
>gi|338530022|ref|YP_004663356.1| methionyl-tRNA formyltransferase [Myxococcus fulvus HW-1]
gi|337256118|gb|AEI62278.1| methionyl-tRNA formyltransferase [Myxococcus fulvus HW-1]
Length = 304
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
M I P+DTS TL KL L ++ + + Y +L PQ + G AP+I+K++
Sbjct: 147 MPIAPDDTSATLYPKLAALGGEVLREFLPA--YLRGELKPVPQPSEGMVLAPIIEKDQGR 204
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
LD++ A + R++ AF P+PGA T K LK+ +A A + PGT+L
Sbjct: 205 LDFTRPAVELERRLRAFTPWPGAFTTL-----GGKLLKVHRATARG--GSGAPGTVLAAG 257
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+GI V CG+ + LL+LQ K+ + A +F+ G
Sbjct: 258 -PDGIEVACGEGSLVLLDLQPEGKRVMRAADFLQG 291
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 7 GTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLK 66
GT A A L ++ +V ++T+PD GRG + PVK+ AL + ++QP L+
Sbjct: 2 GTPDFAVASLAACFDL-GEVVAVVTQPDKPKGRGNTVTAPPVKELALSRGVPVLQPTKLR 60
>gi|83814411|ref|YP_446276.1| methionyl-tRNA formyltransferase [Salinibacter ruber DSM 13855]
gi|294508207|ref|YP_003572265.1| methionyl-tRNA formyltransferase [Salinibacter ruber M8]
gi|83755805|gb|ABC43918.1| methionyl-tRNA formyltransferase [Salinibacter ruber DSM 13855]
gi|294344535|emb|CBH25313.1| methionyl-tRNA formyltransferase [Salinibacter ruber M8]
Length = 307
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
M I P +T+ + +++ +L +++T+++I D + +PQ + + AP I +
Sbjct: 153 MSIGPNETAGEVHDRMAELGAEAVVETVRQI--DAGTVETRPQDDEKATPAPKIHDEDGE 210
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
+ W SA+ + + +P+PGA T + + LKI++ E T PGT+L+ +
Sbjct: 211 IPWDASAEAVHNHVRGLSPYPGAWTLHDDTR-----LKIYRTR--RAEGTGAPGTVLDAD 263
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+LV CG ++++ LQ+ ++++ A +F+NG
Sbjct: 264 GR--LLVACGTGAVEVVVLQQPGRQRLDAADFLNG 296
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KI 59
M+++F GT A L L ++ + V + T PD GRG ++ +PVK+ A I +I
Sbjct: 1 MRVVFMGTPEFAVPSLTALVDAGYPPVAVATGPDRPRGRGQEVTPTPVKETAQAAGIDRI 60
Query: 60 IQP 62
+QP
Sbjct: 61 LQP 63
>gi|254522701|ref|ZP_05134756.1| methionyl-tRNA formyltransferase [Stenotrophomonas sp. SKA14]
gi|219720292|gb|EED38817.1| methionyl-tRNA formyltransferase [Stenotrophomonas sp. SKA14]
Length = 307
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT L +KL +L ++ D + + + K +PQ G +YA + K EA LDW+
Sbjct: 158 DTGGQLHDKLAELGAQVLSDGLGLLRAGI-KPIARPQPEQGVTYAHKLDKAEAKLDWAQD 216
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R + AFNP+P A+ + ++I A AL + PGT+L +GI
Sbjct: 217 AAALARTVRAFNPWPIAEATLAGER-----VRIHGAVALDEAHGQAPGTVLAAG-RDGID 270
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFIN 246
+ CG+ V++L LQ+ K I+A +++N
Sbjct: 271 IACGQGVLRLRVLQREGGKAITAADYLN 298
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT A + L H +V + T+PD +GRG L SPVK A+ I +
Sbjct: 1 MRIVFAGTPEFAVSSLRAAAR-HHEVVAVYTQPDRPAGRGRGLAPSPVKLEAVARGIPVY 59
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK + + L ++ D+M+V+ ILP
Sbjct: 60 QPESLK--------GDAAQQQLRDLQPDLMVVVAYGLILP 91
>gi|387121464|ref|YP_006287347.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|385875956|gb|AFI87515.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 770
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI P++TS L KL +++ +++ + + D T + Q
Sbjct: 147 DTGDMLHKVYCDIT------PQETSAGLYAKLAEVAPAALVEVLDHLT-DGT-FTAERQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 199 DAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQATV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 259 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 307
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 5 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 65 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 97
>gi|381150290|ref|ZP_09862159.1| methionyl-tRNA formyltransferase [Methylomicrobium album BG8]
gi|380882262|gb|EIC28139.1| methionyl-tRNA formyltransferase [Methylomicrobium album BG8]
Length = 307
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ L +KL L I + ++++E + +PQ+ +YA ++K+EA LDW+
Sbjct: 158 EDTAGDLHDKLAALGPIGLEKVLRQVEAGTVR--AEPQNEAQVTYAAKLEKSEAELDWTK 215
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ NP+P A+T Y +++ L+IW+A L ++ +PG + + H +
Sbjct: 216 PADELDRRVRGLNPWPVAQTLY-----REEALRIWRAQPLLEQTGTEPGQVKCTHKH--L 268
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V G ++LLE+Q K++ A F+N
Sbjct: 269 DVATGSGWLRLLEVQLPGGKRMPAQAFLN 297
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIFAGT A L+ L S H + + T+PD +GRG KL SPVK+ AL I ++
Sbjct: 1 MRIIFAGTPEFAVPTLNMLLASGHEVCAVYTQPDRPAGRGRKLQPSPVKETALAAGIPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SLK + E LL E D+M+V+ ILP+
Sbjct: 61 QPDSLK--------SAEAIALLAAFEPDLMVVVAYGMILPQ 93
>gi|401765476|ref|YP_006580483.1| methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400177010|gb|AFP71859.1| methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 315
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS TL +KL L +I T++++ + K + +S + +YA + K EA +D
Sbjct: 159 ITAEDTSATLYDKLADLGPEGLIKTLQQLADNTAKPEVQDESLV--TYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ ++ +K+WKA ++ + +PGTI++ +
Sbjct: 217 WSLSAAQLERCIRAFNPWP------MSWLMIDEQPVKVWKASVINSVTAAEPGTIIDAS- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
NGI V + ++ L LQ KK +SA + +N ++FI
Sbjct: 270 KNGIQVATAEGILNLESLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H +V + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAGRGKKLMPSPVKVLAEEHGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ ++ D+M+V+ ILP
Sbjct: 65 QPASLR--------PQENQQLVADLDADVMVVVAYGLILP 96
>gi|319796455|ref|YP_004158095.1| methionyL-tRNA formyltransferase [Variovorax paradoxus EPS]
gi|315598918|gb|ADU39984.1| methionyl-tRNA formyltransferase [Variovorax paradoxus EPS]
Length = 317
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
K+ FAGT A L+ + + H++VL+L++PD +GRGMKL SPVK++A+ ++ + Q
Sbjct: 5 KVAFAGTPEFARVALEAIAAAGHDVVLVLSQPDRPAGRGMKLQASPVKQFAVANNWPVAQ 64
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
P SL+L+GKY A L K + D+M+V ILP+
Sbjct: 65 PRSLRLDGKYPDEAAIGRDALQKAQPDVMVVAAYGLILPQ 104
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
D + L ++L +L +I++ ++ I L PQ G +YA ++K+EA++DW+
Sbjct: 169 DNTARLHDRLAELGGRMIVEALENI----GSLTRTPQPAEGVTYANKVEKHEALIDWAQP 224
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A I+R+I AF+PFPGA + + +K+W AHA+ ++ PGTIL V+ + +
Sbjct: 225 ADAIVRRIRAFDPFPGANSPL-----DGETVKLWTAHAVPASASAAPGTILAVSDAS-VE 278
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V G + L ELQ+ K++ +F+ G
Sbjct: 279 VAAGDAGVMLTELQRPGGKRLPVADFLRG 307
>gi|383453318|ref|YP_005367307.1| methionyl-tRNA formyltransferase [Corallococcus coralloides DSM
2259]
gi|380732802|gb|AFE08804.1| methionyl-tRNA formyltransferase [Corallococcus coralloides DSM
2259]
Length = 312
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P++TS TL KL L ++ +++ + Y +L +PQ + G AP+I K LD
Sbjct: 158 IAPDETSATLHAKLSALGGDILRESLPR--YLNGELTPQPQPSEGMVLAPIIDKENGKLD 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHAL-SIESTKKPGTILNVNF 213
+S A + R++ AF P+PGA T K++K H + E PGT+L+
Sbjct: 216 FSKPAVELDRRLRAFTPWPGAYTLLGG--------KVFKVHRMRPAEGKGAPGTVLSAG- 266
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI V CG+ + LLE+Q K+ + A +F++G
Sbjct: 267 PEGIEVACGEGSVVLLEVQPEGKRVMRAADFLSG 300
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT A A L+ ++ ++V ++T+PD GRG + PVK+ AL+ I ++Q
Sbjct: 6 RIVFMGTPEFAVASLEACFDV-GDVVAVVTQPDKPKGRGNAVTAPPVKERALEKGIPVLQ 64
Query: 62 PISLK 66
P L+
Sbjct: 65 PQKLR 69
>gi|259909967|ref|YP_002650323.1| methionyl-tRNA formyltransferase [Erwinia pyrifoliae Ep1/96]
gi|387872967|ref|YP_005804354.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia pyrifoliae DSM 12163]
gi|224965589|emb|CAX57121.1| methionyl-tRNA formyltransferase [Erwinia pyrifoliae Ep1/96]
gi|283480067|emb|CAY75983.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia pyrifoliae DSM 12163]
Length = 315
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS TL +KL L ++ T+ ++ + + +S + SYA + K EA LDWSLS
Sbjct: 163 DTSATLYDKLADLGPAGLLTTLAQLAGGSARPQVQDESLV--SYAEKLSKEEARLDWSLS 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ + R I AFNP+P +Y++ ++ +K+WKA L + +PG IL + GI
Sbjct: 221 AEQLGRCIRAFNPWP--VSYFVI---DEQPVKVWKASVLPAVNGHQPGEILQAD-KQGIQ 274
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFIN 246
VV V+ + ELQ KK + A + +N
Sbjct: 275 VVTADGVLNIEELQPAGKKAMKAQDLLN 302
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA LD L +S H +V + T+PD +GRG K+ SPVK+ A +H+I +
Sbjct: 5 LNIIFAGTPDFAARHLDALLSSGHRVVGVFTQPDRPAGRGNKVTASPVKQLAEQHNIAVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ + E +L+ + D+M+V+ ILP
Sbjct: 65 QPASLR--------SEENQQLVAALNADVMVVVAYGLILP 96
>gi|403386880|ref|ZP_10928937.1| methionyl-tRNA formyltransferase [Clostridium sp. JC122]
Length = 310
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 143/308 (46%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS---- 56
MKI+F GT A L+ L E + ++T+PD GRG L SPVK+ ALKH+
Sbjct: 1 MKIVFMGTPDFAVPSLEALI-KEFEVKAVVTQPDRPKGRGKSLAMSPVKEVALKHNIEVY 59
Query: 57 --------------IKIIQPI----------------------SLKLNG----KYHKIAN 76
IK I+P + L+G ++ A
Sbjct: 60 QPEKIRKNQETIDKIKAIEPDFIVVVAFGQILPKEVLEIPRYGCINLHGSLLPRFRGAAP 119
Query: 77 ETHKLL--NKIEFDIMIVMGILPEDTSLTLQNKLEKLSKI---------------LIIDT 119
+ ++ +K+ + ++M + + + L+N +E K+ L+I+T
Sbjct: 120 IHYSIMAGDKVSGNTTMLMDVGLDTGDMLLKNTVEITEKMTAGELYEILKETGAPLLIET 179
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+KK+ Y+ ++ + Q++ YA ++ ++ A +DW+ SA+ + I NPFP A +YY
Sbjct: 180 LKKL-YN-NEVIPEKQNDDLSCYAHMLNRDMANIDWNKSAQEVHNFIRGLNPFPIAYSYY 237
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ K +K+ ++ L+ +STK PGTIL V+ G+ + ++ ++Q NKK +
Sbjct: 238 -----EDKMMKVLESEVLTEKSTKTPGTILKVD-KKGMRISTKDGILLAKKIQFPNKKAM 291
Query: 240 SATEFING 247
+E+I G
Sbjct: 292 KVSEYIKG 299
>gi|386720124|ref|YP_006186450.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
D457]
gi|384079686|emb|CCH14288.1| Methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
D457]
Length = 307
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT L +KL +L ++ D + + + K +PQ G +YA + K EA LDW+
Sbjct: 158 DTGGQLHDKLAELGAQVLSDGLGLLRAGI-KPIARPQPEQGVTYAHKLDKAEARLDWAQD 216
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R + AFNP+P A+ + ++I A AL + + PG +L + +GI
Sbjct: 217 ADALARTVRAFNPWPIAEATLAG-----ERVRIHGAVALDLAHGQAPGAVLAAS-RDGID 270
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFIN 246
+ CG+ ++L LQ+ K I+A +++N
Sbjct: 271 IACGQGALRLRTLQREGGKAITAADYLN 298
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT A + L H +V + T+PD +GRG L SPVK A+ I +
Sbjct: 1 MRIVFAGTPEFAVSSLRAAAR-HHEVVAVYTQPDRPAGRGRGLAPSPVKLEAVARGIPVY 59
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SLK + L ++ D+M+V+ ILP
Sbjct: 60 QPESLK--------DEAAQRQLRDLQPDLMVVVAYGLILPR 92
>gi|418464034|ref|ZP_13034976.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359757375|gb|EHK91529.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 318
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI P++TS L KL +++ +++ + + D T + Q
Sbjct: 146 DTGDMLHKVYCDIT------PQETSAGLYTKLAEIAPAALVEVLDHLT-DGT-FIAERQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 198 DAQSNYAEKLSKEEAKLNWRLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQAAV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ KK +SA + +NG
Sbjct: 258 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPAGKKPMSAQDLLNG 306
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL PVK+ A +H I +
Sbjct: 4 LDIIFAGTPNFAAQHLQVLLNSSHNVIAVYTQPDKPAGRGKKLQAGPVKQLAEQHHIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 96
>gi|374333833|ref|YP_005090520.1| methionyl-tRNA formyltransferase [Oceanimonas sp. GK1]
gi|372983520|gb|AEX99769.1| methionyl-tRNA formyltransferase [Oceanimonas sp. GK1]
Length = 314
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS +L KL L ++ T+ ++ D + + +PQ++ +YA + K EA +DW+L
Sbjct: 162 DTSASLYEKLAVLGPRALLHTLGQLA-DGSAVA-EPQNDALANYAEKLSKEEARIDWTLP 219
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R + AFNP+P +Y++ ++ +K+W+A L S PGTI+ NGI
Sbjct: 220 AAQLERCVRAFNPWP--VSYFLVGEHN---IKLWQAEVLDEASAAAPGTIIAAG-KNGID 273
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFIN 246
V G+ V++LL LQ KK +S + +N
Sbjct: 274 VATGQGVLRLLSLQPPGKKAMSCQDLLN 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 13/102 (12%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ ++FAGT AA L L ++ H+++ + T+PD +GRG KL SPVK A + + +
Sbjct: 4 LNLVFAGTPDFAARHLQALLDAGHHVIAVYTQPDRPAGRGKKLTPSPVKVTAEQAGLPVY 63
Query: 61 QPISLKLNGKYHKIANETHKL-LNKIEFDIMIVMG---ILPE 98
QP SL+ +ET + L + D+M+V+ ILP+
Sbjct: 64 QPQSLR---------DETAQAELAALGADLMVVVAYGLILPQ 96
>gi|307943160|ref|ZP_07658505.1| methionyl-tRNA formyltransferase [Roseibium sp. TrichSKD4]
gi|307773956|gb|EFO33172.1| methionyl-tRNA formyltransferase [Roseibium sp. TrichSKD4]
Length = 313
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P T+ L ++L L L++ + + L F PQ G +YA + K+E +D
Sbjct: 157 IDPNMTAGELHDRLSALGGDLMVRALAALSRG--ALGFTPQDAEGVTYASKLAKSETRID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ SA + I +PFPGA +S NK + LKI ++ A+ ++ PGTI V+
Sbjct: 215 WTQSASNVHNHIRGLSPFPGAWC-ELSVGNKTERLKILRS-AMVEGASGAPGTI--VSLD 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G +V C ++L+++Q+ KK ++A EF+ G
Sbjct: 271 QGPVVACADGSVRLVQVQRAGKKPMTAEEFLRG 303
>gi|453330527|dbj|GAC87273.1| methionyl-tRNA formyl transferase [Gluconobacter thailandicus NBRC
3255]
Length = 303
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 126/308 (40%), Gaps = 76/308 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT A L L + H IV + T+P +GRG + SPV + A I++
Sbjct: 1 MRLIFMGTPDFAVPALHALMAAGHEIVAVYTQPPRPAGRGKAVRRSPVHEAAEAAGIEVR 60
Query: 61 QPISLKLNGKYHK----------------------------------------------- 73
P ++ + H+
Sbjct: 61 TPARVRKDEAEHEAFAALNADAAVVAAYGLILPKAMLNAPRLGCLNIHASLLPRWRGASP 120
Query: 74 -----IANETHKLLNKIEFDIMIVMG--ILPEDTSLT-------LQNKLEKLSKILIIDT 119
+A ++ ++ ++ D + G +L E T ++ L ++L ++ LI+
Sbjct: 121 IQSSIVAGDSQSGVSIMQMDEGLDTGAVLLEEATPISASDTASTLHDRLAEIGGRLIVRA 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++ + PQ G +YA ++K+ + +DWS S + I R+I P+PGA T
Sbjct: 181 LQE------QPVAVPQPEEGVTYAHMLKREDGRIDWSRSCEDIDRQIRGLTPWPGAFTML 234
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ LKI A L +S G ++ + + + CGK +++ +QK + +
Sbjct: 235 -----NEVVLKIGAATPLPEQSGPDAGMAID----DALTIACGKGALRIDRIQKPGRSMM 285
Query: 240 SATEFING 247
+A++F+ G
Sbjct: 286 NASDFVRG 293
>gi|400406430|ref|YP_006589178.1| methionyl-tRNA formyltransferase [secondary endosymbiont of
Heteropsylla cubana]
gi|400364683|gb|AFP85750.1| methionyl-tRNA formyltransferase [secondary endosymbiont of
Heteropsylla cubana]
Length = 316
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 15/171 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +LN++ + I +DTS +L KLEK+ +I T+++I + ++ +PQ
Sbjct: 147 DTGSILNRVVYKIQ------KDDTSASLYKKLEKIGSDALICTLEQIARN--QIIREPQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
N +YA + K EA L+WSLSA + R + AFNP+P + Y +K+ +K+W A
Sbjct: 199 NTFATYATKLTKEEAKLNWSLSATQLERCVRAFNPWPVSYFYL-----EKQMIKVWSAGV 253
Query: 197 -LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ + KPGTIL I V GK+++ L +LQ KK +S +F+N
Sbjct: 254 NKELFLSYKPGTILATK-KKEIHVATGKDILILRQLQPQGKKIMSVQDFLN 303
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L ++H ++ + T+PD GRG L SPVK+ A +++I +
Sbjct: 5 LRIIFAGTPNFAAHHLNALICTKHKVIGVFTQPDRLGGRGKHLKSSPVKQLAKQYNIPLF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QPIS L E + L ++ DI++V+ ILP+D
Sbjct: 65 QPISFSL--------IEEKENLIQLNPDIIVVVAYGLILPQD 98
>gi|423116639|ref|ZP_17104330.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5245]
gi|376377607|gb|EHS90375.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5245]
Length = 315
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ D+ + G I EDTS TL +KL L +I+T+K++
Sbjct: 130 AGDTETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGTLYDKLANLGPQGLIETLKQLAA 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
K + ++ + ++A + K EA +DWSLSA + R I AFNP+P +I +
Sbjct: 190 GTAKPVVQDEALV--THAQKLSKEEARIDWSLSAAQLERCIRAFNPWP---MSWIEIDGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+W+A ++ + PGTI+ GI V ++ LL LQ KK +SA + +
Sbjct: 245 P--IKVWQASVINTATAAVPGTIIEAT-KQGIQVATSDGILNLLSLQPAGKKAMSAQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HNIV + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAQEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP SL+ + +L++ + D+M+V+
Sbjct: 65 QPASLR--------PQDNQQLVSDLHADVMVVV 89
>gi|402312266|ref|ZP_10831195.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium ICM7]
gi|400370325|gb|EJP23313.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium ICM7]
Length = 313
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 135/313 (43%), Gaps = 77/313 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT + L L + H++ L+LT+ D RG +L+ +PVK+ AL +I ++
Sbjct: 1 MKIVFMGTPDFSVEPLKELVKAGHDVSLVLTREDKKRNRG-ELSPTPVKELALSLNIPVL 59
Query: 61 QPISLKLNGKYHKIANET---------HKLLNKIEFDIM------IVMGILPE------- 98
P +K ++ +E K+L K+ DI I +LPE
Sbjct: 60 TPSKMKDEALIERLKSENADFFVVVAYGKILPKVILDIPKFGCINIHASLLPEYRGAAPI 119
Query: 99 --------------------------------------DTSLTLQNKLEKLSKILIIDTI 120
+T +L +KL L I+DTI
Sbjct: 120 QWSIVDGKEKTGITTMLMDEGLDTGDILKQYEIEIDKKETGGSLFDKLAVLGGEAIVDTI 179
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
E + PQ YA +I K+ +D++ A I R I NP+P A T Y
Sbjct: 180 ANFE----SIVPTPQGEATTEYAKMISKSMGEIDFNKPAVEIERLIRGMNPWPSAYTRY- 234
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVN------FHNGILVVCGKNVIKLLELQKN 234
+ K LKIW+A ++ ++ P L+ N F++ I ++C ++++++L LQ
Sbjct: 235 ----QGKVLKIWEAD-VAENISELPNINLSENYGKIYSFNSRIFIICNQSILEVLSLQLE 289
Query: 235 NKKKISATEFING 247
KK++SA +F+ G
Sbjct: 290 GKKRMSAKDFLMG 302
>gi|284006132|emb|CBA71373.1| methionyl-tRNA formyltransferase [Arsenophonus nasoniae]
Length = 323
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L K+ I + +DTS TL KL K+ ++ T+ + K + Q+
Sbjct: 149 DTGDMLYKVSCPIEL------KDTSATLYQKLAKIGPTALLHTLDLVASAQAKP--EKQN 200
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
N +YA + K+EA++DW+LSA+ I R I AFNP+P +Y+I N +K+W A
Sbjct: 201 NTFATYAEKLSKDEALIDWTLSAEQIERCIRAFNPWP--VSYFIFADNP---IKVWYAEV 255
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ + PGTIL+ + GI V GK ++ +L++Q KK + +F+N
Sbjct: 256 IYHQIDSSPGTILSAD-KTGIKVATGKGILNILKIQPAGKKIMLVCDFLN 304
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 1 MKIIFAGTSISAAAILDTL--YNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58
++IIFAGT AA L L + ++ IV +LT+PD +GRG KL SPVK A K +I
Sbjct: 5 LRIIFAGTPDFAAQHLAALLSFKDKYQIVGVLTQPDKPAGRGRKLASSPVKILAEKANIA 64
Query: 59 IIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
+ QP +LK E+ + + D+M+V+ ILPE
Sbjct: 65 VFQPTTLK--------TAESQRWIENKHADVMVVVAYGLILPE 99
>gi|257877735|ref|ZP_05657388.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC20]
gi|257811901|gb|EEV40721.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC20]
Length = 317
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 65/311 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL+ L + + + ++T+PD GR + +PVK+ A+KH + ++Q
Sbjct: 3 KIVFMGTPAFSVPILEGLLEAGYEVAAVVTQPDRPVGRKKTITPTPVKEAAMKHGLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + +I LL F + +L P+ ++ + L
Sbjct: 63 PEKISGSPEMEQIQALAPDLLITAAFGQFLPSALLEVPKHGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
E+ + + I++ IKK++ D+ +F K
Sbjct: 123 YAIMEGEQETGVTIMEMIKKMDAGGIFAQARLPITAQDDVGTMFDKLSLLGKDLLLETVP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A I ++ P+P A + Q
Sbjct: 183 KILSGELQPVPQEEAKVTFSPNISREQEAIDWQKTAVQIDAQVRGMRPWPIA----FTTQ 238
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
N ++ K+W+ L +T +PGTI+ +L+ CG+ V+ + ELQ K +
Sbjct: 239 NGNRW-KLWQVTPLEQTTTAQPGTIIE-RTKKTLLIACGEGTVLAIDELQPAGKGRQDIA 296
Query: 243 EFINGCIKNIK 253
F+NG + I+
Sbjct: 297 AFLNGSGQQIQ 307
>gi|388565891|ref|ZP_10152371.1| methionyl-tRNA formyltransferase [Hydrogenophaga sp. PBC]
gi|388266876|gb|EIK92386.1| methionyl-tRNA formyltransferase [Hydrogenophaga sp. PBC]
Length = 318
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL ++L L LI++ ++ L +PQ G +YA I+K EA +DW+
Sbjct: 167 DTTDTLHDRLAVLGGRLIVEALEMAA--CGGLHAEPQPQEGVTYAHKIEKAEAAIDWTQP 224
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A I R++ AF+PFPGA T + ++ +K+W A AL + G L V GI
Sbjct: 225 AAAIARRVRAFDPFPGAHTTH-----ARETIKVWAAEALP--GNGRAGEALAVE-PEGIT 276
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG+ ++L LQ+ K++ A +F+ G
Sbjct: 277 VACGEGALRLTVLQRAGGKRLPAADFLRG 305
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT A L+ L + + L+LT+PD +GRGMKL SPVK AL+ I +
Sbjct: 1 MKLIFAGTPAFARVALERLLAAGFGVPLVLTQPDRPAGRGMKLQASPVKALALERGIAVS 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+L+GKY + A ++ + D+M+V ILP
Sbjct: 61 QPRSLRLDGKYPEDAMAARAAIDAAQADVMVVAAYGLILP 100
>gi|420264394|ref|ZP_14767025.1| methionyl-tRNA formyltransferase [Enterococcus sp. C1]
gi|394768367|gb|EJF48295.1| methionyl-tRNA formyltransferase [Enterococcus sp. C1]
Length = 317
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 131/311 (42%), Gaps = 65/311 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL+ L + + + ++T+PD GR + +PVK+ ALKH + ++Q
Sbjct: 3 KIVFMGTPAFSVPILEGLLEAGYEVAAVVTQPDRPVGRKKTITPTPVKEAALKHGLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + +I LL F + +L P+ ++ + L
Sbjct: 63 PEKISGSPEMEQIQALAPDLLITAAFGQFLPSALLEVPKYGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
E+ + + I++ IKK++ D+ +F K
Sbjct: 123 YAIMEGEQETGVTIMEMIKKMDAGGIFAQAHLPITAQDDVGTMFDKLSLLGKDLLLETLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A I ++ P+P A + Q
Sbjct: 183 KILSGELQPVPQEEAKVTFSPNISREQEAIDWQKTAVQIDAQVRGMRPWPIA----FTTQ 238
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
N ++ K+W+ L +T +PGTI+ +L+ CG+ V+ + ELQ K +
Sbjct: 239 NGNRW-KLWQVTPLEQTTTAQPGTIIE-RTKKTLLIACGEGTVLAIDELQPAGKGRQDIA 296
Query: 243 EFINGCIKNIK 253
F+NG + I+
Sbjct: 297 AFLNGSGQQIQ 307
>gi|171057042|ref|YP_001789391.1| methionyl-tRNA formyltransferase [Leptothrix cholodnii SP-6]
gi|259646039|sp|B1XW99.1|FMT_LEPCP RecName: Full=Methionyl-tRNA formyltransferase
gi|170774487|gb|ACB32626.1| methionyl-tRNA formyltransferase [Leptothrix cholodnii SP-6]
Length = 322
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ +L ++L L L++ + + +P + +YA I K EA +D
Sbjct: 166 IGPADTTASLHDRLAVLGAELVLQALDAAAAGTLQPVVQPLEGV--TYAHKIDKREAPID 223
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSL A I R++ AF+PFPGA ++ LK+W A + + + ++
Sbjct: 224 WSLPAAVIERRVRAFDPFPGA-----TFSLGGDTLKLWSAQVVDLPAGHGHAAGEVISTE 278
Query: 215 NGI-LVVCGKNVIKLLELQKNNKKKISATEFIN 246
G LV CG+ + L +LQ+ K++S +++
Sbjct: 279 GGTPLVACGEGALALTQLQRAGGKRLSGRDYLQ 311
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++ FAGT A A L ++ + H++ L+LT+PD +GRGMKL SPVK+ AL + +
Sbjct: 4 LRVAFAGTPEFARAALARIHAAGHDVPLVLTQPDRPAGRGMKLQASPVKQLALDLGVPVA 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92
QP+SL+L+GKY A L + D+M+V
Sbjct: 64 QPMSLRLDGKYPAEAAAAQAALLAAQIDVMVV 95
>gi|257868126|ref|ZP_05647779.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC30]
gi|257874599|ref|ZP_05654252.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC10]
gi|257802240|gb|EEV31112.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC30]
gi|257808763|gb|EEV37585.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC10]
Length = 317
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 65/311 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL+ L + + + ++T+PD GR + +PVK+ A+KH + ++Q
Sbjct: 3 KIVFMGTPAFSVPILEGLLEAGYEVAAVVTQPDRPVGRKKTITPTPVKEAAMKHGLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + +I LL F + +L P+ ++ + L
Sbjct: 63 PEKISGSPEMEQIQALAPDLLITAAFGQFLPSALLEVPKHGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
E+ + + I++ IKK++ D+ +F K
Sbjct: 123 YAIMKGEQETGVTIMEMIKKMDAGGIFAQARLPITAQDDVGTMFDKLSLLGKDLLLETVP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A I ++ P+P A + Q
Sbjct: 183 KILSGELQPVPQEEAKVTFSPNISREQEAIDWQKTAVQIDAQVRGMRPWPIA----FTTQ 238
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
N ++ K+W+ L +T +PGTI+ +L+ CG+ V+ + ELQ K +
Sbjct: 239 NGNRW-KLWQVTPLEQTTTAQPGTIIE-RTKKTLLIACGEGTVLAIDELQPAGKGRQDIA 296
Query: 243 EFINGCIKNIK 253
F+NG + I+
Sbjct: 297 AFLNGSGQQIQ 307
>gi|338980959|ref|ZP_08632201.1| Methionyl-tRNA formyltransferase [Acidiphilium sp. PM]
gi|338208133|gb|EGO96023.1| Methionyl-tRNA formyltransferase [Acidiphilium sp. PM]
Length = 301
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 17/153 (11%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDT++ L ++L L L+I K ++ + + PQ G +YAP + K +A +D
Sbjct: 156 IGPEDTTVDLLDRLADLGAALVI---KVLDGNFPPV---PQPEGGVTYAPKLSKADAEID 209
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I+R+I AF P+PG +T + LKI +A + + +PGT+L+
Sbjct: 210 WSASAAVILRRIRAFRPWPGTETRL-----DGEALKIIRAEPAAGQG--EPGTVLD---- 258
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ + + CG I+ +Q+ + + A F+ G
Sbjct: 259 DRLAIACGDAAIRPTLVQRAGRAAMPAEAFLRG 291
>gi|404378557|ref|ZP_10983646.1| methionyl-tRNA formyltransferase [Simonsiella muelleri ATCC 29453]
gi|294483685|gb|EFG31369.1| methionyl-tRNA formyltransferase [Simonsiella muelleri ATCC 29453]
Length = 309
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ + ++L KL + I+ ++++ + L PQ G +YA + K EA ++W
Sbjct: 160 DTANEVHDELMKLGAMAIVSDLQELARSGS-LKATPQPENGVTYAQKLSKEEAQINWQEP 218
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ I RKI AFNP P T + ++Q K +KIW+AH ++ + G +L N +GI+
Sbjct: 219 AELITRKIRAFNPVP---TAWTNWQGKP--MKIWQAHFVA--QSGAVGEVLAAN-GDGIV 270
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG I + ELQ + K+++ F+ G
Sbjct: 271 VACGNGAICITELQASGSKRMTVQAFLAG 299
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL + +
Sbjct: 1 MRVIFAGTPDFAAAALRAIAEAGFEIPLVLTQPDRPKGRGMQLQASPVKQTALDLGLHVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E +L + D+M+V ILP +
Sbjct: 61 QPEKLRNN-------TEALAMLRDVNADVMVVAAYGLILPPE 95
>gi|56459129|ref|YP_154410.1| methionyl-tRNA formyltransferase [Idiomarina loihiensis L2TR]
gi|73919397|sp|Q5QXI6.1|FMT_IDILO RecName: Full=Methionyl-tRNA formyltransferase
gi|56178139|gb|AAV80861.1| Methionyl-tRNA formyltransferase [Idiomarina loihiensis L2TR]
Length = 316
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P++TS +L +KLE L + +K + D + KPQS+ +YA + K E +D
Sbjct: 155 ISPDETSASLYHKLESLGPEALTKVLKDL--DGYQSQAKPQSDANATYAKKLTKQEGKID 212
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ A I R + AFNP+P + + + +KI A + S K PGTI+N + H
Sbjct: 213 WTQPAAFIERCVRAFNPWPMSWCQSEHLKAGQNTVKIHAAELIQGASNKGPGTIIN-STH 271
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI VV G ++++ + Q KK A+ +NG
Sbjct: 272 EGIDVVTGDGILRITQAQMPGKKAQPASTLVNG 304
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT AA L L + H +V + T+PD +GRG K S VKK AL+H + +
Sbjct: 1 MRIVFAGTPDFAAQHLQQLLDESHQVVGVYTQPDRPAGRGKKPQPSAVKKLALEHQLPVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SLK + E L ++ D+M+V+ +LP+
Sbjct: 61 QPESLK--------SEEDQAALADLKPDVMVVVAYGLLLPQ 93
>gi|429083007|ref|ZP_19146058.1| Methionyl-tRNA formyltransferase [Cronobacter condimenti 1330]
gi|426548194|emb|CCJ72099.1| Methionyl-tRNA formyltransferase [Cronobacter condimenti 1330]
Length = 315
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 12/154 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKP--QSNIGESYAPLIKKNEAV 152
I EDTS +L +KL +L +++T++ D+ P Q + +YA + K EA
Sbjct: 159 ITSEDTSASLYDKLARLGPQGLLETLR----DLANGNIAPEKQDDAQATYAEKLSKEEAR 214
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
LDWSLSA + R I AFNP+P +Y++ + +K+WKA ++ +S PGT+L+ +
Sbjct: 215 LDWSLSAAQLERCIRAFNPWP--VSYFMI---DDQPVKVWKASVMTNQSDAAPGTVLDAS 269
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI + + ++ L LQ KK ++A + +N
Sbjct: 270 -KQGIQIATAEGMLNLEMLQPAGKKAMTAQDLLN 302
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L +S H +V + T+PD +GRG KL PVK A ++ I +
Sbjct: 5 LRIIFAGTPDFAARHLEALLSSSHQVVGVFTQPDRPAGRGKKLMPGPVKILAQENGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E L+ + D+M+V+ ILPE
Sbjct: 65 QPKSLR--------PAENQALVAGLNADVMVVVAYGLILPE 97
>gi|225686788|ref|YP_002734760.1| methionyl-tRNA formyltransferase [Brucella melitensis ATCC 23457]
gi|256262078|ref|ZP_05464610.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 2 str.
63/9]
gi|384213547|ref|YP_005602630.1| methionyl-tRNA formyltransferase [Brucella melitensis M5-90]
gi|384410649|ref|YP_005599269.1| methionyl-tRNA formyltransferase [Brucella melitensis M28]
gi|384447146|ref|YP_005661364.1| methionyl-tRNA formyltransferase [Brucella melitensis NI]
gi|254789341|sp|C0RMH3.1|FMT_BRUMB RecName: Full=Methionyl-tRNA formyltransferase
gi|225642893|gb|ACO02806.1| methionyl-tRNA formyltransferase [Brucella melitensis ATCC 23457]
gi|263091767|gb|EEZ16098.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 2 str.
63/9]
gi|326411196|gb|ADZ68260.1| methionyl-tRNA formyltransferase [Brucella melitensis M28]
gi|326554487|gb|ADZ89126.1| methionyl-tRNA formyltransferase [Brucella melitensis M5-90]
gi|349745143|gb|AEQ10685.1| methionyl-tRNA formyltransferase [Brucella melitensis NI]
Length = 306
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR-GMKLNFSPVKKYA------- 52
M+++F GT + IL + + +V T+P +GR G++L SPV + A
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 53 -----------------LKHSIKIIQPISLKLN---------GKYHKIAN---------- 76
LK + I+ L L G Y+ A+
Sbjct: 61 FTPKSLKGAEEQDVFASLKADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 77 ----------ETHKLLNKIE--FDIMIV-----MGILPEDTSLTLQNKLEKLSKILIIDT 119
ET ++ K++ D V + I P+ T+ L ++L + L+I
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ +E + L +PQ+ G +YA I K EA +DWS AK + I +PFPGA +
Sbjct: 181 LGALERE--SLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGA---W 235
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ ++ + E + PGT+L+ + + + CG+ ++L LQ++ K +
Sbjct: 236 CEMEINGAVERVKLQRSTLGEGSGAPGTVLD----DRLTIACGEGAVRLATLQRSGGKPL 291
Query: 240 SATEFING 247
A EF+ G
Sbjct: 292 PAQEFLRG 299
>gi|408356909|ref|YP_006845440.1| methionyl-tRNA formyltransferase [Amphibacillus xylanus NBRC 15112]
gi|407727680|dbj|BAM47678.1| methionyl-tRNA formyltransferase [Amphibacillus xylanus NBRC 15112]
Length = 317
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 75/310 (24%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + +L ++ + + +VL++T+PD GR L+ PVK+ A+KH+I + Q
Sbjct: 3 KIVFMGTPDFSVPVLQSIISEGYEVVLVVTQPDRPKGRKRILSAPPVKEEAIKHNIPVFQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE-------- 98
P K+ Y +I + L+ F I + +LPE
Sbjct: 63 P--EKIRQSYQEILDYQPDLIVTAAFGQILPKELLDAPKYGCINVHASLLPELRGGAPIH 120
Query: 99 --------DTSLTLQNKLE--------------------------KLSKI---LIIDTIK 121
+T +++ +E KLS+ L+I+T+
Sbjct: 121 YAIMQGKKETGISIMYMVEALDAGAVLSQVSVPIDVKDHVGSLHDKLSEAGAKLLIETLP 180
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
K+ +D + + + +YAP IK+ E +LDW+ SA+ + + +P+P A T
Sbjct: 181 KL-FDQSIEAVEQDDELA-TYAPNIKREEEMLDWTRSAEELYNHVRGLHPWPVASTTL-- 236
Query: 182 YQNKKKFLKIWKAHALS--IESTKKPGTILNVNFHNG-ILVVCGK-NVIKLLELQKNNKK 237
K LK+W A S +PG I+ + NG I V CG +++KL+++Q +
Sbjct: 237 ---DDKNLKVWWAEPGEDKAPSDSQPGEIIAI--ENGTIDVACGNGDILKLVDIQLAGNR 291
Query: 238 KISATEFING 247
++ +F+NG
Sbjct: 292 RMLVKDFLNG 301
>gi|392543419|ref|ZP_10290556.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas piscicida JCM
20779]
Length = 315
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 12/150 (8%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS L NKL +L +IDT+ ++ ++ + Q + +YA + K EA +DW +
Sbjct: 163 DTSADLYNKLAELGPDALIDTLARLS--AGEITPEKQDDTLANYAKKLSKEEADIDWQME 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A I R I AFNP+P + + N +KIW+A I+ G +L + H GI
Sbjct: 221 AAQIERNIRAFNPWP------VCFTNMAGNSVKIWQAKV--IDEQGDAGHVLRADKH-GI 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
++ CG +++ LQ KK +SA +F+NG
Sbjct: 272 VIACGTQALEIHTLQPQGKKPMSAQDFLNG 301
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA LD L S+H++V + PD +GRG KL VK A +H++ ++
Sbjct: 5 LRIVFAGTPDFAARHLDALIQSQHDVVAVYCPPDRPAGRGKKLKACEVKVLAQEHNLPVL 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM--GIL 96
QP SLK E L + D+M+V+ G+L
Sbjct: 65 QPQSLK--------TPEAQAELAALGADVMVVVAYGVL 94
>gi|337287493|ref|YP_004626966.1| methionyl-tRNA formyltransferase [Thermodesulfatator indicus DSM
15286]
gi|335360321|gb|AEH46002.1| methionyl-tRNA formyltransferase [Thermodesulfatator indicus DSM
15286]
Length = 316
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 91/162 (56%), Gaps = 11/162 (6%)
Query: 88 DIMIV--MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPL 145
DI+++ + ILPEDT+ TL +KL +L LI + + +++ KLF + Q + G SYAP+
Sbjct: 150 DILLMEKIPILPEDTAGTLHDKLAQLGAKLINEALDRLKE--GKLFPQKQPDEGVSYAPM 207
Query: 146 IKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKP 205
++K + ++D++ A+ + I +P+P A Y+ + K +K + P
Sbjct: 208 LRKEDGLIDFNKPARELANLIRGLDPWPTAYAYF-----RGKLVKFFSPE-FDERDYGPP 261
Query: 206 GTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G IL ++ +LV GK ++K+ ELQ KK+I+A EF G
Sbjct: 262 GEILGLS-QGKLLVGTGKGLLKIGELQLEGKKRITAQEFWRG 302
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIF GT A IL L E +V ++T+PD +GRG +L PVK A + + +
Sbjct: 5 LRIIFMGTPTFAVPILKALLTREDEVVAVVTQPDKPAGRGKRLTPPPVKLVAQEKGVPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP +K E + L K+ D+++V ILP++
Sbjct: 65 QPAKIK--------DQEFLETLKKLLPDVIVVAAYGKILPKE 98
>gi|300718673|ref|YP_003743476.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (FMet)
N-formyltransferase [Erwinia billingiae Eb661]
gi|299064509|emb|CAX61629.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (FMet)
N-formyltransferase [Erwinia billingiae Eb661]
Length = 314
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDTS TL +KL +L ++ T+ ++ K Q + SYA + K EA LD
Sbjct: 159 IGPEDTSATLYSKLAELGPEGMLVTLSQLADGTAKPEV--QDEVQVSYAEKLSKEEAKLD 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P Y + ++ +K+WKA L S + PG I+ +
Sbjct: 217 WSLSATQLERCIRAFNPWP---VSYFTVDDQP--VKVWKATVLP-HSDQHPGKIVQAD-K 269
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
NGI V V+ + ELQ KK + A + +N
Sbjct: 270 NGIQVATADGVLNIEELQPAGKKPMKAQDLLN 301
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK+ A +H++ +
Sbjct: 5 LNIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGNKLTASPVKQLAEQHNLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPKSLR--------PEENQQLVADLRADVMVVVAYGLILP 96
>gi|157372745|ref|YP_001480734.1| methionyl-tRNA formyltransferase [Serratia proteamaculans 568]
gi|166988370|sp|A8GKG6.1|FMT_SERP5 RecName: Full=Methionyl-tRNA formyltransferase
gi|157324509|gb|ABV43606.1| methionyl-tRNA formyltransferase [Serratia proteamaculans 568]
Length = 314
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 18/168 (10%)
Query: 79 HKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNI 138
HK+ IE D DTS +L +KL +L ++ T++++ K + +S +
Sbjct: 153 HKIACPIEAD----------DTSASLYDKLAQLGPQGMLTTLQQMAAGTAKREVQDESLV 202
Query: 139 GESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALS 198
+YA + K EA LDW+L A + R + AFNP+P Y + ++ +K+W+A L+
Sbjct: 203 --TYAEKLSKEEARLDWNLPAVQLERCVRAFNPWP---VSYFTIDDQP--VKVWQATVLA 255
Query: 199 IESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ +PGTI++ + H GI V + ++ L +LQ KK +SA + +N
Sbjct: 256 QNADAEPGTIIHADKH-GIQVATAEGILNLTQLQPAGKKPMSAQDLLN 302
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H IV + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHHLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPKSLRPEENQHLVAD--------LNADVMVVVAYGLILP 96
>gi|423110641|ref|ZP_17098336.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5243]
gi|376378705|gb|EHS91463.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5243]
Length = 315
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ D+ + G I EDTS TL +KL L +I+T+K++
Sbjct: 130 AGDTETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGTLYDKLANLGPQGLIETLKQLAA 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
K + ++ + ++A + K EA +DWSLSA + R I AFNP+P +I +
Sbjct: 190 GTAKPVVQDEALV--THAQKLSKEEARIDWSLSAAQLERCIRAFNPWP---MSWIEIDGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+W+A ++ + PGTI+ GI V ++ LL LQ KK +SA + +
Sbjct: 245 P--IKVWQASVINTATAAVPGTIIEAT-KQGIQVATNDGILNLLSLQPAGKKAMSAQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAQEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP SL+ + +L++ + D+M+V+
Sbjct: 65 QPASLR--------PQDNQQLVSDLHADVMVVV 89
>gi|376254401|ref|YP_005142860.1| methionyl-tRNA formyltransferase [Corynebacterium diphtheriae PW8]
gi|372117485|gb|AEX69955.1| methionyl-tRNA formyltransferase [Corynebacterium diphtheriae PW8]
Length = 311
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 75/320 (23%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L L SEH +V +LT+PD GRG L+ SPV + A +H I+++
Sbjct: 1 MRLIFAGTPEPAVVALSRLLESEHEVVAVLTRPDARRGRGRTLHPSPVSELAQQHGIEVL 60
Query: 61 QPISLKLN--------GKYHKIANE-----------THKLLNKIEFD-IMIVMGILPE-- 98
P ++K N + ++A + T LL + I + +LP
Sbjct: 61 TPATIKPNTPDGDAFRARLAELAPDCVPVVAYGNLITEDLLQAVPHGWINLHFSLLPRWR 120
Query: 99 ------------DTSLTLQN-KLEK---LSKILII------------DTIKKIEYDMTKL 130
DTS +++K +IL + D + ++ Y L
Sbjct: 121 GAAPAQAAIAAGDTSTGATTFRIDKGLDTGQILGVIHEPIQSTDTAGDLLTRLAYSGADL 180
Query: 131 FFKPQSNIGES------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTY 178
N+ + YAP I +A + W+ SA+ + + I A P PGA
Sbjct: 181 LVNTMDNLAQGIATYSEQIGTATYAPKITTEDARIQWTHSAEAVDKHIRAVTPGPGA--- 237
Query: 179 YISYQNKKKFLKIWKAHALSI--ESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNK 236
S ++F K +S+ ES +PG + N +LV G I+L ++Q K
Sbjct: 238 -WSLLGDQRF----KIGPVSVEEESDLQPGHMRIEK--NRVLVGTGDLNIELDQIQPQGK 290
Query: 237 KKISATEFINGCIKNIKYFI 256
K++ A+++ G ++N + +
Sbjct: 291 KRMKASDWARG-LQNTEGLV 309
>gi|385854289|ref|YP_005900802.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240355]
gi|325203230|gb|ADY98683.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240355]
Length = 308
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ + + L ++ ++ +++++ +L Q G +YA ++K EA +D
Sbjct: 156 IQPTDTANEVHDALMEIGAAAVVADLQQLQSK-GRLNAVKQPEEGVTYAQKLRKEEARID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I RKI AFNP P A ++ YQ K +KI +A ++ + T G +L+ +
Sbjct: 215 WSESAAVIERKIRAFNPVPAA---WVEYQGKP--MKIRRADVVAQQGTA--GEVLSCSA- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG+N +K+ ELQ ++++ F G
Sbjct: 267 DGLVVACGENALKITELQPAGGRRMNIAAFAAG 299
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++E D+M+V ILP+D
Sbjct: 61 QPEKLRNNA-------EALQMLKEVEADVMVVAAYGLILPQD 95
>gi|261866824|ref|YP_003254746.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415770730|ref|ZP_11484999.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416075606|ref|ZP_11585097.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|261412156|gb|ACX81527.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348006091|gb|EGY46555.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|348656636|gb|EGY74245.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D17P-2]
Length = 318
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + ++TS L KL +++ +++ + + D T + Q
Sbjct: 146 DTGDMLHKVYCDITL------QETSAGLYAKLAEIAPAALVEVLDHLT-DGT-FTAERQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 198 DAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQAAV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 258 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 306
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 96
>gi|73543089|ref|YP_297609.1| methionyl-tRNA formyltransferase [Ralstonia eutropha JMP134]
gi|72120502|gb|AAZ62765.1| methionyl-tRNA formyltransferase [Ralstonia eutropha JMP134]
Length = 331
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+D++ +L +KL L +I++ ++K+ T L PQ G +YA I K+EA LD
Sbjct: 173 DDSTGSLHDKLAALGGRMIVEALRKLAAGET-LPATPQPEAGITYAEKIGKDEAPLDLRR 231
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIEST--KKPGTILNVNFHN 215
A + ++ AFNPFPGA + Q +K W+A LS ++ GT+L + +
Sbjct: 232 PAAELASQVRAFNPFPGA-----TLQLDNTVIKCWQAVPLSAGTSLPHPAGTVLASD-AS 285
Query: 216 GILVVCG-KNVIKLLELQKNNKKKISATEFING 247
G+++ CG + +++ ELQK ++ A +F+ G
Sbjct: 286 GVIIACGNGSALQVTELQKPGGRRQPAQQFLQG 318
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-I 59
+++ FAGT A L+ ++ + + +V +L++PD +GRGM+L SPVK+YA+ ++++ +
Sbjct: 7 LRVAFAGTPEFARVALEAIHAAGYPVVAVLSQPDRPAGRGMQLQASPVKQYAVANALEPV 66
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDTSLTL 104
+QP SL+ GKY + A L + D+M+V ILP + LTL
Sbjct: 67 LQPRSLRRTGKYPEDAATAIDALAQTAPDVMVVAAYGLILPAEV-LTL 113
>gi|167760431|ref|ZP_02432558.1| hypothetical protein CLOSCI_02805 [Clostridium scindens ATCC 35704]
gi|336422123|ref|ZP_08602277.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
5_1_57FAA]
gi|167661930|gb|EDS06060.1| methionyl-tRNA formyltransferase [Clostridium scindens ATCC 35704]
gi|336009413|gb|EGN39407.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
5_1_57FAA]
Length = 312
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
E+T +L +KL + L + T+K +E D + + K Q YA ++ K +DW+
Sbjct: 158 EETGGSLHDKLAEAGARLCVRTLKALE-DGSAVREK-QGESPTEYARMLTKELGSIDWTQ 215
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A +I R + NP+P A T + K +KIW+A + E+ K PGTI+ + +G
Sbjct: 216 DALSIERLVRGLNPWPSAYTDW-----NGKVMKIWEAKVMEGETGKAPGTIVKIE-KDGF 269
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
LV G ++K+LELQ KK++ A F+ G
Sbjct: 270 LVQAGAGLLKILELQIPGKKRMKADAFLRG 299
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IF GT + L L + H +VL +T+PD GRG ++ + PVK+ AL++ I +
Sbjct: 1 MKVIFMGTPEFSVGTLKALAEAGHEVVLAVTQPDKPKGRGGRMQYPPVKEMALEYGIPVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP ++ A E + L K E DIM+V+ ILP++
Sbjct: 61 QPKKIR--------APECVEELRKYEADIMVVIAFGQILPKE 94
>gi|410658820|ref|YP_006911191.1| Methionyl-tRNA formyltransferase [Dehalobacter sp. DCA]
gi|410661806|ref|YP_006914177.1| Methionyl-tRNA formyltransferase [Dehalobacter sp. CF]
gi|409021175|gb|AFV03206.1| Methionyl-tRNA formyltransferase [Dehalobacter sp. DCA]
gi|409024162|gb|AFV06192.1| Methionyl-tRNA formyltransferase [Dehalobacter sp. CF]
Length = 315
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I+PE T+ + + L ++ +I+T++ ++ + +P+ SYAPL+K+ +D
Sbjct: 155 IVPEATTGEVYDALAQIGAKALINTLEGLQNGTVRPVPQPKVF---SYAPLLKREHEQVD 211
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKK--PGTILNVN 212
WS A I +I NP+PGA T + Q K ++ ALS ++ + PG+IL++
Sbjct: 212 WSWDAAKIHNRIRGLNPWPGAFTLFRGEQVKIWLSELSGKPALSGQTAQNALPGSILSLA 271
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
G+LV G+ ++K+ ELQ KKK+ A +F NG
Sbjct: 272 -KGGLLVQTGEGILKISELQPAGKKKMRAQDFYNG 305
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT A +L+ LY S H I + T+PD +GRG KL SPVK A K+ + +
Sbjct: 1 MRLVFMGTPDFAVPVLEALYASGHQIGGVFTQPDKPAGRGNKLKASPVKVLAEKYGLAVF 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP +K A E + ++ D ++V+
Sbjct: 61 QPARIK--------APEAVDQIRDLQPDCIVVV 85
>gi|416094612|ref|ZP_11588552.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|348008646|gb|EGY48900.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
Length = 290
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + ++TS L KL +++ +++ + + D T + Q
Sbjct: 118 DTGDMLHKVYCDITL------QETSAGLYAKLAEIAPAALVEVLDHLT-DGT-FTAERQD 169
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 170 DAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQAAV 229
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 230 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 278
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 11/76 (14%)
Query: 26 IVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKI 85
++ + T+PD +GRG KL SPVK+ A +H I + QP SL+ ET L +
Sbjct: 1 MIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVYQPKSLR--------KAETQAELTAL 52
Query: 86 EFDIMIVMG---ILPE 98
+ D+M+V+ ILP+
Sbjct: 53 QADVMVVVAYGLILPQ 68
>gi|416525275|ref|ZP_11741537.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416539548|ref|ZP_11750008.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416552263|ref|ZP_11756986.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|417352644|ref|ZP_12129803.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353565975|gb|EHC31599.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|363559192|gb|EHL43367.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363559898|gb|EHL44047.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363564749|gb|EHL48791.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
Length = 315
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ + ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEVLVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|402574143|ref|YP_006623486.1| methionyl-tRNA formyltransferase [Desulfosporosinus meridiei DSM
13257]
gi|402255340|gb|AFQ45615.1| methionyl-tRNA formyltransferase [Desulfosporosinus meridiei DSM
13257]
Length = 323
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 26/169 (15%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGES-YAPLIKKNEAVL 153
I PE T+ + ++L + L++DT+ IE + ++ PQ+ GES YAPL+K+ L
Sbjct: 155 ITPESTTGEIHDELATIGAELLVDTLNLIE--VGRVIPTPQT--GESNYAPLLKREHEGL 210
Query: 154 DWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKA---------------HALS 198
DWS A + +I NP+PGA + + + LK+W++ H S
Sbjct: 211 DWSRRAVDLHDQIRGLNPWPGAFAMF-----RGENLKVWQSLPFFPPDEVVGTEIEHPES 265
Query: 199 IESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ +PG I+ V + +LV G+ +++++E+Q K+ + A +F+NG
Sbjct: 266 KAAVYRPGQIIQV-LGDSLLVQTGEGILRVIEVQPAGKRSMPARDFLNG 313
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT A L L S H+IV + T+PD +GRG L SPVK A + + I
Sbjct: 1 MRVVFMGTPDFAVPTLKALAESGHDIVGVFTQPDRPAGRGKNLKPSPVKVAAEELGLSIY 60
Query: 61 QPISLK 66
QPIS+K
Sbjct: 61 QPISIK 66
>gi|374851127|dbj|BAL54096.1| methionyl-tRNA formyltransferase [uncultured gamma proteobacterium]
Length = 307
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 80 KLLNKIEFDIMIV---MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+++ K++ M++ + ILP++T+ L +L +L +++ + I + +KPQ
Sbjct: 137 QIVEKLDAGPMLLQKAVPILPDETAGALCERLARLGAEALLEALAAIAKGTVE--WKPQD 194
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+YA I K+EA LDWS SA + RK+ AFNP+P A T + + LKIW+A A
Sbjct: 195 ESQATYADKIAKDEAYLDWSQSAGQLARKVRAFNPWPVAFTQFGGQR-----LKIWRAEA 249
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ + + PGTI V + V G+ ++LLE+Q + ++A F+N
Sbjct: 250 VECSAHEAPGTI--VRAKKTLEVATGEGCLRLLEVQLPGGRIMAAEAFLN 297
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+FAGT A L L + ++ + T+PD +GRG +L PVK+ AL + + +
Sbjct: 1 MRIVFAGTPAFAVPSLKALLAAGQKVIAVYTQPDRPAGRGHQLKPCPVKEAALSYGLAVR 60
Query: 61 QPISLK 66
QP +L+
Sbjct: 61 QPPTLR 66
>gi|288550485|ref|ZP_05970615.2| methionyl-tRNA formyltransferase [Enterobacter cancerogenus ATCC
35316]
gi|288314936|gb|EFC53874.1| methionyl-tRNA formyltransferase [Enterobacter cancerogenus ATCC
35316]
Length = 268
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDTS TL +KL +L +I T++++ K + ++ + +YA + K+EA+LD
Sbjct: 112 ITPEDTSATLYDKLAELGPQGLIKTLEQLAEGTAKPEVQDEALV--TYAEKLSKDEALLD 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+L A + R I AFNP+P ++ ++ +K+WKA + PGTI+ N
Sbjct: 170 WALPAAQLERCIRAFNPWP---MSWMVIDDQP--VKVWKASVIESHVQAAPGTIVEAN-K 223
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V + ++ L LQ KK +S + +N ++FI
Sbjct: 224 QGIQVATAEGILNLESLQPAGKKAMSVQDLLN---SRREWFI 262
>gi|94499927|ref|ZP_01306463.1| methionyl-tRNA formyltransferase [Bermanella marisrubri]
gi|94428128|gb|EAT13102.1| methionyl-tRNA formyltransferase [Oceanobacter sp. RED65]
Length = 313
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T ++ K+E IM P DT +L ++L ++ ++D + ++ ++ + Q
Sbjct: 143 DTGPMIKKVETPIM------PSDTGGSLHDRLMEMGSQAVVDVVA--QFANGQVVAEVQD 194
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ YA + K+EA++DW SA+ + RKI AFNPFP T ++ +++ +A
Sbjct: 195 DSLSCYAKKLTKDEALVDWRSSAEEVARKIRAFNPFPCCYTLLGDHR-----IRLLQAQI 249
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
PGTI+++N GI+V CG+ + L ++Q +KK ++ + +NG
Sbjct: 250 FPQNHNALPGTIMSIN-KQGIMVACGEFAVVLEKIQLPSKKPMNVADVLNG 299
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK++FAGT AA+ L L N+ ++V + T+PD +GRG KL SPVK+ AL++ I +
Sbjct: 1 MKVVFAGTPDFAASHLQALLNNHVDVVAVYTQPDRPAGRGKKLTPSPVKRLALENQIPVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP + K E L+ ++ D+M+V+ +LP+
Sbjct: 61 QPENFK--------QQEDRDALSALQPDLMVVVAYGLLLPQ 93
>gi|325567767|ref|ZP_08144378.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus ATCC
12755]
gi|325158540|gb|EGC70687.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus ATCC
12755]
Length = 319
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 131/311 (42%), Gaps = 65/311 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + IL+ L + + + ++T+PD GR + +PVK+ ALKH + ++Q
Sbjct: 5 KIVFMGTPAFSVPILEGLLEAGYEVAAVVTQPDRPVGRKKTITPTPVKEAALKHRLLVLQ 64
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + +I LL F + +L P+ ++ + L
Sbjct: 65 PEKITGSPEMEQIQALAPDLLITAAFGQFLPSALLEVPKYGAINVHASLLPKYRGGAPVH 124
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
E+ + + I++ IKK++ D+ +F K
Sbjct: 125 YAIMEGEQETGVTIMEMIKKMDAGGIFAQAHLPITAQDDVGTMFDKLSLLGKDLLLETLP 184
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW +A I ++ P+P A + Q
Sbjct: 185 KILSGELQPVPQEEAKVTFSPNISREQEAIDWQKTAVQIDAQVRGMRPWPIA----FTTQ 240
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
N ++ K+W+ L +T +PGTI+ +L+ CG+ V+ + ELQ K +
Sbjct: 241 NGNRW-KLWQVTPLEQTTTAQPGTIIE-RTKKTLLIACGEGTVLAIDELQPAGKGRQDIA 298
Query: 243 EFINGCIKNIK 253
F+NG + I+
Sbjct: 299 AFLNGSGQQIQ 309
>gi|319954833|ref|YP_004166100.1| methionyl-tRNA formyltransferase [Cellulophaga algicola DSM 14237]
gi|319423493|gb|ADV50602.1| methionyl-tRNA formyltransferase [Cellulophaga algicola DSM 14237]
Length = 315
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 135/316 (42%), Gaps = 63/316 (19%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYA-------- 52
++I+F GT A ILDTL + ++IV ++T PD +GRG KLN S VKKYA
Sbjct: 4 LRIVFMGTPDFAVGILDTLVQNSYDIVGVITAPDKPAGRGRKLNESAVKKYAVEHNLKVM 63
Query: 53 ----------------LKHSIKII--------------------------------QPIS 64
LK +++II PI+
Sbjct: 64 QPTNLKSEEFLDELKSLKPNLQIIVAFRMLPKVVWEIPALGTFNLHASLLPDYRGAAPIN 123
Query: 65 LKLNGKYHKIANETHKLLNKIEFDIMIV---MGILPEDTSLTLQNKLEKLSKILIIDTIK 121
+ K T + NKI+ +++ + I PED + +L +KL L ++++T+K
Sbjct: 124 WAVINGETKTGVTTFFIDNKIDTGEILLQQEIAITPEDNAGSLHDKLMSLGAGVVVETVK 183
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
IE D +P + I E A I K+ ++W + I I +P+P A T +
Sbjct: 184 AIEADTISPKKQPTTPI-EKVAYKIHKDTCEINWDTTIDKIYNHIRGLSPYPAAWTTLYT 242
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
+ + FLKI+ A L K TI+ I V G + LLE+Q K+K+
Sbjct: 243 -GDDELFLKIYDAVILKEPHHLKLKTIVFDKKTMKIAVAGG--FVALLEIQLPGKRKMKT 299
Query: 242 TEFINGCIKNIKYFIS 257
E +NG + K ++
Sbjct: 300 HEVLNGLKLDEKAYVG 315
>gi|429106390|ref|ZP_19168259.1| Methionyl-tRNA formyltransferase [Cronobacter malonaticus 681]
gi|426293113|emb|CCJ94372.1| Methionyl-tRNA formyltransferase [Cronobacter malonaticus 681]
Length = 283
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDTS +L +KL +L ++ T++ + + + Q ++ +YA + K EA LDW+L
Sbjct: 130 EDTSASLYDKLAQLGPQGLLATLEDLAA--GRAVPEKQDDVQATYAEKLSKEEARLDWTL 187
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA + R I AFNP+P + I Q +K+WKA + +S PGTIL+ GI
Sbjct: 188 SAVRLERCIRAFNPWP-VSFFMIDEQP----VKVWKASVIHQQSNAAPGTILDAG-KQGI 241
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ ++ L ELQ KK +SA + +N
Sbjct: 242 QIATTDGILNLEELQPAGKKPMSAQDILN 270
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 29 ILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFD 88
+ T+PD +GRG KL PVK A ++ I + QP SL+ E +L+ + D
Sbjct: 1 MFTQPDRPAGRGKKLMPGPVKVLAQENDIPVFQPKSLR--------PAENQELVAALNAD 52
Query: 89 IMIVMG---ILPE 98
+M+V+ ILPE
Sbjct: 53 VMVVVAYGLILPE 65
>gi|326402653|ref|YP_004282734.1| methionyl-tRNA formyltransferase [Acidiphilium multivorum AIU301]
gi|325049514|dbj|BAJ79852.1| methionyl-tRNA formyltransferase [Acidiphilium multivorum AIU301]
Length = 301
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 17/153 (11%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDT++ L ++L L L+I K ++ + + PQ G +YAP + K +A +D
Sbjct: 156 IGPEDTTVDLLDRLADLGAALVI---KVLDGNFPPV---PQPEAGVTYAPKLSKADAEID 209
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I+R+I AF P+PG +T + LKI +A + + +PGT+L+
Sbjct: 210 WSASAAVILRRIRAFWPWPGTETRL-----DGEALKIIRAEPAAGQG--EPGTVLD---- 258
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ + + CG I+ +Q+ + + A F+ G
Sbjct: 259 DRLAIACGDAAIRPTLVQRAGRAAMPAEAFLRG 291
>gi|409204030|ref|ZP_11232230.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas flavipulchra JG1]
Length = 315
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 12/150 (8%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS L NKL +L +IDT+ ++ ++ + Q + +YA + K EA +DW +
Sbjct: 163 DTSADLYNKLAELGPDALIDTLARLS--AGEITPEKQDDTLANYAKKLSKEEAEIDWQME 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A I R I AFNP+P + + N +KIW+A ++ G +L + H GI
Sbjct: 221 AAQIERNIRAFNPWP------VCFTNMAGNSVKIWQAKV--VDEQGDAGHVLRADKH-GI 271
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
++ CG +++ LQ KK +SA +F+NG
Sbjct: 272 VIACGTQSLEIQTLQPQGKKPMSAQDFLNG 301
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I+FAGT AA LD L S+H++V + PD +GRG KL VK A +H++ ++
Sbjct: 5 LRIVFAGTPDFAARHLDALIQSQHDVVAVYCPPDRPAGRGKKLKACEVKVLAQEHNLPVL 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM--GIL 96
QP SLK ++ L I+ D+MIV+ G+L
Sbjct: 65 QPQSLK--------TSDAQAELAAIDADVMIVVAYGVL 94
>gi|254455875|ref|ZP_05069304.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082877|gb|EDZ60303.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 307
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 133/315 (42%), Gaps = 87/315 (27%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
KI+F GT + A IL +LY + + I + T+P S RG ++N SP++ A ++
Sbjct: 4 KIVFMGTPMFAVPILKSLYQNGYPISNVYTQPPQKSQRGQRINKSPIQGIAETLNLDFKT 63
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------ILPE 98
P SLK N NE ++ KIE D+++V+ ILP
Sbjct: 64 PKSLKDN-------NEEYESFKKIEADLVVVVAYGQIIPKEFLSLSKKGFINIHASILPR 116
Query: 99 ----------------DTSLTLQNKLEKLSKILIIDTIKKIEYD---------------- 126
+T +++ EKL + +T K I+ D
Sbjct: 117 WRGAAPIQRSIMNLDKETGVSIMKIAEKLDTGPVCNTYK-IDLDNNLNAQDIGEKLSLLA 175
Query: 127 ------------MTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPG 174
K F Q + +YA I+K+E +DW+ SAK I+ KIN P PG
Sbjct: 176 AEKILDNIDDILDDKATFIEQDHSKVTYASKIQKSEGEIDWTESAKNIIGKINGLYPTPG 235
Query: 175 AKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQK 233
A ++I + K LK + + PG +++ + + +VCGKN IK+ E+Q+
Sbjct: 236 A--FFIYNGERYKILKAEIGNGIG-----NPGEVIS----DYLEIVCGKNQSIKITEIQR 284
Query: 234 NNKKKISATEFINGC 248
KK + EFI G
Sbjct: 285 QGKKPQNIGEFILGS 299
>gi|335040152|ref|ZP_08533288.1| Methionyl-tRNA formyltransferase [Caldalkalibacillus thermarum
TA2.A1]
gi|334179977|gb|EGL82606.1| Methionyl-tRNA formyltransferase [Caldalkalibacillus thermarum
TA2.A1]
Length = 314
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 128/308 (41%), Gaps = 66/308 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L L + +++ ++T+PD GR +L PVK+ AL++ + ++
Sbjct: 1 MKIVFMGTPDFAVPSLSMLIENGYHVAGVVTQPDRPKGRKRQLAPPPVKQAALRYHLPVL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFD---------------IMIVMGILP-------- 97
Q +LK +++ L+ F I + +LP
Sbjct: 61 QSETLKDRDVLNQLKEWAPDLIVTAAFGQLLPPEVLQLPPLGCINVHASLLPKYRGGAPI 120
Query: 98 --------EDTSLTLQNKLEKLSKILIIDTIK--------------KIEYDMTKLFFK-- 133
++T +T+ +EKL I+ ++ K+ +L +
Sbjct: 121 HRAIMNGEKETGVTIMYMVEKLDAGDILTQVRVPIDDHDDVGTLHDKLSQAGAELLIQTL 180
Query: 134 -----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
PQ + +YAP+IK+ + +DWS + I PFP A T
Sbjct: 181 PRLERGEISPIPQDDALATYAPVIKREDERIDWSKPHHAVYNHIRGLRPFPVAFTTV--- 237
Query: 183 QNKKKFLKIWKAHALSIESTK-KPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKIS 240
+ LK+WKA E GTI ++ GI VVCG V + L E+Q + KK++S
Sbjct: 238 --NGQPLKVWKAIKTDQEQQNFASGTIYRLD-ETGIGVVCGDGVGLILTEIQPSGKKRMS 294
Query: 241 ATEFINGC 248
A +F+ G
Sbjct: 295 AADFLRGA 302
>gi|429098213|ref|ZP_19160319.1| Methionyl-tRNA formyltransferase [Cronobacter dublinensis 582]
gi|426284553|emb|CCJ86432.1| Methionyl-tRNA formyltransferase [Cronobacter dublinensis 582]
Length = 320
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L K+ I +DTS +L +KL +L ++ T+ + + Q
Sbjct: 152 DTGDMLRKLSCPITA------DDTSASLYDKLAQLGPQGMLATLTDLASGAA--VPEKQD 203
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDW+LSA + R I AFNP+P +Y++ + +K+WKA
Sbjct: 204 DTNATYAEKLSKEEARLDWTLSAAQLERCIRAFNPWP--VSYFMI---DDQPVKVWKASV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
L +S PGT+L GI + V+ L ELQ KK +SA + +N
Sbjct: 259 LDQQSKATPGTVLEAG-KTGIQIATADGVLNLEELQPAGKKAMSAQDLLN 307
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L +S H IV + T+PD +GRG KL PVK A ++ + +
Sbjct: 5 LRIIFAGTPDFAARHLEALLSSSHEIVGVFTQPDRPAGRGKKLMPGPVKVLAEENGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L+ + D+M+V+ ILP
Sbjct: 65 QPKSLR--------PAENQALVAALNADVMVVVAYGLILP 96
>gi|116328326|ref|YP_798046.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116331052|ref|YP_800770.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122281198|sp|Q04SV8.1|FMT_LEPBJ RecName: Full=Methionyl-tRNA formyltransferase
gi|122283885|sp|Q050Y2.1|FMT_LEPBL RecName: Full=Methionyl-tRNA formyltransferase
gi|116121070|gb|ABJ79113.1| Methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124741|gb|ABJ76012.1| Methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 315
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 132/318 (41%), Gaps = 84/318 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
MKI + GT +A +L L +S ++ ++T PD GR K PVKK AL+H I +
Sbjct: 1 MKIGYFGTPEHSAKLLKALIDSTLAEVLFVVTNPDRPKGRNKKTEAGPVKKTALEHHIPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNK---IEFDIMIVMG---ILPED-------------- 99
Q Y I E K L+ D+ +V ILP++
Sbjct: 61 FQ---------YESIKREKEKALSDFGSFPADLYVVFAYGSILPKEVYECPPLSSINLHG 111
Query: 100 ----------------------TSLTLQNKLEKLSK--ILIIDTIKKIEYDMTKLFFK-- 133
+ +T+Q EK+ + IL+ I I D T+
Sbjct: 112 SLLPDLRGASPVQTALWKGYSASGITIQYIGEKMDEGDILLSQKIDIIPEDNTETLMNKI 171
Query: 134 -----------------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFN 170
PQ++ +Y IK + +LDWSL A+ + +I A
Sbjct: 172 TDAGTESILRLLKAYDGKPFPAIPQNHAKATYCGKIKSEDRILDWSLGAEELHNRIRALY 231
Query: 171 PFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLL 229
P A T ++ K+ + K +LSIES +PG + ++ G+L CG +++L
Sbjct: 232 PDAIATT---RFREKRIGILKTKLSSLSIESNPEPGKLKRLD-KKGLLTQCGDGRFLEIL 287
Query: 230 ELQKNNKKKISATEFING 247
ELQ NK ++SA++F+NG
Sbjct: 288 ELQPENKNRMSASDFLNG 305
>gi|300088798|ref|YP_003759320.1| methionyl-tRNA formyltransferase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299528531|gb|ADJ26999.1| methionyl-tRNA formyltransferase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 318
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ +L +L + L +D + +I K +P N+ SYAP++ K ++DWS
Sbjct: 165 DTTGSLTGRLAIIGAALTLDVLPQILSGTIKPHPQPTDNV--SYAPMLTKKAGLIDWSEP 222
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI- 217
A+ I R+I A P+PGA T + + +K+ + L+I + K PGTI+ N +
Sbjct: 223 AEVIWRRIRALQPWPGATTRW-----GDRPIKLLETIPLNIPADKPPGTIVTGNPDMAVP 277
Query: 218 -LVVCGKNVIKLLELQKNNKKKISATEFING 247
V G ++ ++ LQ K+ + EF+ G
Sbjct: 278 WAVSTGAGLLGIVRLQSAGKRPATGAEFLRG 308
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62
I+F GT A L+ L +++V + T+PD SGRG L SPVK A + + QP
Sbjct: 9 IVFMGTPDFAVPALEGLAGEGYDVVAVYTRPDAPSGRGRNLTASPVKHRAESLRLAVRQP 68
Query: 63 ISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL 96
SL+ + ++A+ L+ + +++ +L
Sbjct: 69 GSLRSPEELERLADLQPDLVVVAAYGLILPSPVL 102
>gi|119383394|ref|YP_914450.1| methionyl-tRNA formyltransferase [Paracoccus denitrificans PD1222]
gi|166215494|sp|A1AZR0.1|FMT_PARDP RecName: Full=Methionyl-tRNA formyltransferase
gi|119373161|gb|ABL68754.1| methionyl-tRNA formyltransferase [Paracoccus denitrificans PD1222]
Length = 297
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ L ++L ++ LI++T+ ++ L +PQ G +YA I K EA +DW
Sbjct: 157 EDTTADLHDRLAEMGAALIVETLHRL-----PLPAEPQPAEGVTYAQKIDKAEARIDWGR 211
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R+I +PFPGA + + + K L+ A + PG +L +G
Sbjct: 212 PAAQVDRQIRGLSPFPGA--WCLIGGERVKLLRSRLA-----AGSGAPGRVL-----SGF 259
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ CG+ +++LE Q+ K+ + A E + G
Sbjct: 260 TIACGEGAVEVLEAQREGKRPMPAAEILRG 289
>gi|220933383|ref|YP_002512282.1| methionyl-tRNA formyltransferase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219994693|gb|ACL71295.1| methionyl-tRNA formyltransferase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 318
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 92 VMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEA 151
V I P DT+ L ++L + L++D ++ ++ +L +PQ +YA + K EA
Sbjct: 158 VTPIGPGDTAQELHDRLAEQGAQLLLDCLEDLQ--AGRLRPEPQDEALATYAEKLSKAEA 215
Query: 152 VLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNV 211
LDW LSA + R++ AFNP+P A T+ + L+IW A ++ T PGT++
Sbjct: 216 ELDWFLSAAALDRQVRAFNPWPVAFTHL-----DGETLRIWAAAPVASTVTATPGTVV-A 269
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
GI V G+ +++L +Q + ++A + + G
Sbjct: 270 EGPQGIDVATGEGLLRLTRIQFPGGRPLTAEQVVAG 305
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++I++AGT A L L +S H++V + T+PD +GRG KL SP+K AL+H I +
Sbjct: 7 LRIVYAGTPEFAVPALQALIDSPHDVVAVYTQPDRPAGRGRKLTPSPIKHLALEHGIPVE 66
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP LK E L D+M+V ILP
Sbjct: 67 QPERLK--------PPEVQARLRAYAPDVMVVAAYGLILP 98
>gi|319778866|ref|YP_004129779.1| methionyl-tRNA formyltransferase [Taylorella equigenitalis MCE9]
gi|317108890|gb|ADU91636.1| Methionyl-tRNA formyltransferase [Taylorella equigenitalis MCE9]
gi|399115576|emb|CCG18379.1| methionyl-tRNA formyltransferase [Taylorella equigenitalis 14/56]
Length = 318
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT A + L S H I L++T+PD +GRGMKL SPVK AL H+ K+I
Sbjct: 1 MKIVFAGTPDFARVAYEALLESGHEIPLVMTQPDRPAGRGMKLQSSPVKVSALNHNSKVI 60
Query: 61 QPISLKLN-GKYH----KIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L GK + A E + L I+ D+M+V ILP+
Sbjct: 61 QPVSLRLTVGKLGPQAVEQATEAKRELENIKPDVMVVAAYGLILPQ 106
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 101 SLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAK 160
S L +KL L I + + IE + K Q G +YA I K+E +LDW+ +
Sbjct: 173 SSQLHDKLAVLGGDAITEVMSNIES--FRRTPKKQPEEGITYAEKIAKSEGLLDWNEETE 230
Query: 161 TIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKK--PGTILNVNFHNGIL 218
+ RKI AFNPFPG + + +K+WK+ ++ PG +L ++ GI
Sbjct: 231 ILERKIRAFNPFPGVTLALPNLE-----VKVWKSAVSDLKKPADAIPGQVLKIS-SEGIE 284
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V V++LLELQK KK FING
Sbjct: 285 VATKDGVLRLLELQKAGAKKQDVATFING 313
>gi|220931833|ref|YP_002508741.1| methionyl-tRNA formyltransferase [Halothermothrix orenii H 168]
gi|254789357|sp|B8CWS7.1|FMT_HALOH RecName: Full=Methionyl-tRNA formyltransferase
gi|219993143|gb|ACL69746.1| methionyl-tRNA formyltransferase [Halothermothrix orenii H 168]
Length = 316
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ TL +KL + L++ T+ IE + + QS SYA I + LDWS
Sbjct: 159 EDTAGTLHDKLASIGGDLLVKTLNDIEKGVAPR--EKQSEDKASYAYKIDRKIGELDWSR 216
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTK-----KPGTILNVN 212
S++ I + NP+PGA T + K K LKIW L + T+ + G ++ +
Sbjct: 217 SSEDIFNLVRGVNPWPGAYTTW-----KGKLLKIWWVEPLKLTVTENDKKMEAGEVITAS 271
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+GI+V G + +K++ELQ +KKI+A +F+ G
Sbjct: 272 QEDGIIVKTGDDAVKIIELQLAGRKKITADKFVLG 306
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
M I+F G+ A L+ LYN I ++T+PD GRG KL +PVK+ A K +K+
Sbjct: 1 MNIVFMGSPDFAVPGLEKLYNEPGITIKAVVTQPDRKKGRGHKLRPTPVKQMAHKLGLKV 60
Query: 60 IQ 61
+Q
Sbjct: 61 LQ 62
>gi|167772293|ref|ZP_02444346.1| hypothetical protein ANACOL_03670 [Anaerotruncus colihominis DSM
17241]
gi|167665396|gb|EDS09526.1| methionyl-tRNA formyltransferase [Anaerotruncus colihominis DSM
17241]
Length = 306
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 129/314 (41%), Gaps = 85/314 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A L L + H + + T+PD GRG KL PVK AL++ + +
Sbjct: 1 MRIVFMGTPEFAVPCLSRLISDGHAVAGVFTQPDKPQGRGYKLMPPPVKVCALENGLSVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED------------------ 99
QP ++ + LL ++ ++++V+ ILP D
Sbjct: 61 QPAKMR--------DGQALALLKELSPELIVVVAYGKILPPDILELPPLGCVNVHGSLLP 112
Query: 100 ---------------------TSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNI 138
T++ + L+ IL +T + +L+ + + +
Sbjct: 113 KYRGAAPIQWSVLNGDRTAGVTTMYMAEGLDTGDMILKRETPLGPDETSGELYGR-LAGL 171
Query: 139 G------------ESYAPLIKKNEAV-------------LDWSLSAKTIMRKINAFNPFP 173
G E AP + ++ A+ +DW+ A + I NP+P
Sbjct: 172 GAQALSETVRLIGEGCAPRVPQDGALATHAPMLTKELARIDWTKPAAEVHNLIRGMNPWP 231
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQK 233
A T + LK++++ L+ + T PGT+ G +V CG+ ++LLE+Q+
Sbjct: 232 VAHTSL-----DGRPLKVYRSR-LAPDGTGAPGTLAK---SGGFVVACGQGAVELLEIQE 282
Query: 234 NNKKKISATEFING 247
KK+++A +++ G
Sbjct: 283 AGKKRMAAADYLRG 296
>gi|444348295|ref|ZP_21155991.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
gi|443547349|gb|ELT56863.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
Length = 770
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + ++TS L KL +++ +++ + + D T + Q
Sbjct: 147 DTGDMLHKVYCDITL------QETSAGLYAKLAEIAPAALVEVLDHLT-DGT-FTAERQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 199 DAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQAAV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 259 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 307
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 5 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 65 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 97
>gi|365966642|ref|YP_004948204.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans ANH9381]
gi|365745555|gb|AEW76460.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans ANH9381]
Length = 769
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + ++TS L KL +++ +++ + + D T + Q
Sbjct: 146 DTGDMLHKVYCDITL------QETSAGLYAKLAEIAPAALVEVLDHLT-DGT-FTAERQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 198 DAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQAAV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 258 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 306
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 96
>gi|444337068|ref|ZP_21151100.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|443547680|gb|ELT57132.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 770
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + ++TS L KL +++ +++ + + D T + Q
Sbjct: 147 DTGDMLHKVYCDITL------QETSAGLYAKLAEIAPAALVEVLDHLT-DGT-FTAERQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 199 DAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQAAV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 259 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 307
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 5 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 65 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 97
>gi|161870944|ref|YP_001600124.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 053442]
gi|189044571|sp|A9M463.1|FMT_NEIM0 RecName: Full=Methionyl-tRNA formyltransferase
gi|161596497|gb|ABX74157.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 053442]
Length = 308
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ + + L ++ ++ +++++ +L Q G +YA + K EA +D
Sbjct: 156 IRPTDTANEVHDALMEIGAAAVVADLQQLQSK-GRLNAVKQPKEGVTYAQKLSKEEARID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I RKI AFNP P A ++ YQ K +KI +A ++ + G +L+ +
Sbjct: 215 WSESAAVIERKIRAFNPVPAA---WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSCS-A 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG+N +K+ ELQ K++S F G
Sbjct: 267 DGLVVACGENALKITELQPAGGKRMSIQAFAAG 299
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++E D+M+V ILP+D
Sbjct: 61 QPEKLRNNA-------EALQMLKEVEADVMVVAAYGLILPQD 95
>gi|397661082|ref|YP_006501782.1| methionyl-tRNA formyltransferase [Taylorella equigenitalis ATCC
35865]
gi|394349261|gb|AFN35175.1| methionyl-tRNA formyltransferase [Taylorella equigenitalis ATCC
35865]
Length = 318
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+FAGT A + L S H I L++T+PD +GRGMKL SPVK AL H+ K+I
Sbjct: 1 MKIVFAGTPDFARVAYEALLESGHEIPLVMTQPDRPAGRGMKLQSSPVKVSALNHNSKVI 60
Query: 61 QPISLKLN-GKYH----KIANETHKLLNKIEFDIMIVMG---ILPE 98
QP+SL+L GK + A E + L I+ D+M+V ILP+
Sbjct: 61 QPVSLRLTVGKLGPQAVEQATEAKRELENIKPDVMVVAAYGLILPQ 106
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 101 SLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAK 160
S L +KL L I + + IE + K Q G +YA I K+E +LDW+ +
Sbjct: 173 SSQLHDKLAVLGGDAITEVMSNIES--FRRTPKKQPEEGITYAEKIAKSEGLLDWNEETE 230
Query: 161 TIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKK--PGTILNVNFHNGIL 218
+ RKI AFNPFPG + + +K+WK+ ++ PG +L ++ GI
Sbjct: 231 ILERKIRAFNPFPGVTLALPNLE-----VKVWKSAVSDLKKPADAIPGQVLKIS-SEGIE 284
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V V++LLELQK KK FING
Sbjct: 285 VATKDGVLRLLELQKAGAKKQDVATFING 313
>gi|352090156|ref|ZP_08954328.1| methionyl-tRNA formyltransferase [Rhodanobacter sp. 2APBS1]
gi|351677534|gb|EHA60682.1| methionyl-tRNA formyltransferase [Rhodanobacter sp. 2APBS1]
Length = 312
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT +L ++L L ++ + +++ T L PQ G +YA + K EA LD+S
Sbjct: 163 DDTGGSLHDRLATLGAEVLAEGLRRTLAGET-LAATPQPETGVTYAHKLDKAEAKLDFSR 221
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
SA + R++ AF+P+P + + + L+IW A A+ + PG++L +GI
Sbjct: 222 SAIELERQVRAFDPWP-----VAAGEIAGEPLRIWAARAIEADHHAAPGSVLAAG-RDGI 275
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ CG+ +++ +Q+ ++I A +++N
Sbjct: 276 DLACGQGALRVTTVQRAGGRRIGAADYLN 304
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT + L+ S +V + T+PD +GRG +L SPVK+ AL + +
Sbjct: 6 LRVVFAGTPEFSVPCLEACRASGAEVVAVYTQPDRPAGRGRQLAESPVKRAALATGLAVE 65
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL 96
QP SLK ++A+ LL + + +++ +L
Sbjct: 66 QPESLKPAEVQQRLADYRPDLLVVVAYGLILPRKVL 101
>gi|387824565|ref|YP_005824036.1| Methionyl-tRNA formyltransferase [Francisella cf. novicida 3523]
gi|332184031|gb|AEE26285.1| Methionyl-tRNA formyltransferase [Francisella cf. novicida 3523]
Length = 313
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 132/304 (43%), Gaps = 63/304 (20%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT +A +L LY S+HNI +LT+PD GRG K+ FSPVK+ AL + +
Sbjct: 4 LNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKGRGKKVQFSPVKEVALANHTPVF 63
Query: 61 QPISLKLNGKY-HKIANETHKLLNKIEFDIMIV---------------MGILPE------ 98
QP+S K + + KI ++ I + I++ + +LP+
Sbjct: 64 QPLSFKKDPQVLEKIRELKPDVIVVIAYGIIVPQEFLDIPKYGCLNIHVSLLPKWRGAAP 123
Query: 99 -------------------DTSLTLQNKLEKLS-KILIIDTIKKIEYDMTKLFFKP---- 134
D L + L L I DT + + KL KP
Sbjct: 124 IQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIDIQDTDTSQTLHDKFAKLSIKPLLQT 183
Query: 135 ---------QSNIGE-SYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
Q G+ +YA I K E ++D++ SA I I AF P+P A Y+I
Sbjct: 184 LEKIEIIKPQPQRGKPTYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPVA--YFIL--- 238
Query: 185 KKKFLKIWKAHALSIE-STKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATE 243
+ +K+ L + GTI++++ +G + +I+ +LQ NKK ++ +
Sbjct: 239 DGEAVKVGDFEILDQNVDNSQAGTIIDID-RDGFDIATSDKIIRFKQLQFPNKKMLNIID 297
Query: 244 FING 247
+NG
Sbjct: 298 ILNG 301
>gi|294638021|ref|ZP_06716281.1| methionyl-tRNA formyltransferase [Edwardsiella tarda ATCC 23685]
gi|451967544|ref|ZP_21920783.1| methionyl-tRNA formyltransferase [Edwardsiella tarda NBRC 105688]
gi|291088813|gb|EFE21374.1| methionyl-tRNA formyltransferase [Edwardsiella tarda ATCC 23685]
gi|451313643|dbj|GAC66145.1| methionyl-tRNA formyltransferase [Edwardsiella tarda NBRC 105688]
Length = 315
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDTS TL +KL +L ++ T+ ++ + + Q + YA + K EA LDW L
Sbjct: 162 EDTSATLYDKLAELGPQGLLTTLAQLADGRAQ--AQQQDDALACYAEKLSKEEARLDWQL 219
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A+ + R + AFNP+P ++++ + + +K+W A+ L ES +PGTI+ + GI
Sbjct: 220 PAEQLARCVRAFNPWP--VSFFML---EGQPVKVWGANVLHQESDAQPGTIVGAD-KQGI 273
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V + ++ L +LQ KK ++A + +N
Sbjct: 274 AVATAQGILLLTQLQPAGKKSMAARDLLN 302
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L SEH IV + T+PD +GRG KL SPVK A +H++ +
Sbjct: 5 LRIIFAGTPDFAARHLAALLGSEHQIVGVFTQPDRPAGRGNKLTPSPVKALAEQHALPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E +L+ ++ D+M+V+ ILP+
Sbjct: 65 QPASLR--------PAENQQLVADLQADVMVVVAYGLILPQ 97
>gi|339504930|ref|YP_004692350.1| methionyl-tRNA formyltransferase Fmt [Roseobacter litoralis Och
149]
gi|338758923|gb|AEI95387.1| methionyl-tRNA formyltransferase Fmt [Roseobacter litoralis Och
149]
Length = 305
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PE+T+ L ++L L + I+DT+ +++ +L PQ+ YA I K EA +D
Sbjct: 155 IGPEETTAQLHDRLSALGAVCIVDTLARLD----QLEAVPQTEDSVIYAAKIDKAEAQVD 210
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A+ + R I +PFPGA T + K +I +A + PGT+
Sbjct: 211 WEQPAEDVDRLIRGLSPFPGAWTLLGDTRVKLLGSRISEASGV-------PGTV----RL 259
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
N + VVCG ++L ++Q+ K SA +F+NG
Sbjct: 260 NPLRVVCGTGAVELTQVQRAGKAAQSAADFLNG 292
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT + +L+ L + H I + ++P +GRG K SPV+ A + +
Sbjct: 1 MRLVFMGTPDFSVPVLEALVAAGHEIACVYSQPPRPAGRGKKDRPSPVQARAEALGLPVR 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL 96
P+SL+ A ++ + + +++ IL
Sbjct: 61 HPVSLRSEEALADFAGLEAEVAVVVAYGLILPQAIL 96
>gi|418721373|ref|ZP_13280550.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii str. UI
09149]
gi|418736597|ref|ZP_13292996.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|421096032|ref|ZP_15556739.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii str.
200801926]
gi|410360933|gb|EKP11979.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii str.
200801926]
gi|410742065|gb|EKQ90815.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii str. UI
09149]
gi|410747483|gb|EKR00388.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 132/318 (41%), Gaps = 84/318 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
MKI + GT +A +L L +S ++ ++T PD GR K PVKK AL+H I +
Sbjct: 1 MKIGYFGTPEHSAKLLKALIDSTLAEVLFVVTNPDRPKGRNKKTEAGPVKKTALEHHIPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNK---IEFDIMIVMG---ILPED-------------- 99
Q Y I E K L+ D+ +V ILP++
Sbjct: 61 FQ---------YESIKREKEKALSDFGSFPADLYVVFAYGSILPKEVYECPPLSSINLHG 111
Query: 100 ----------------------TSLTLQNKLEKLSK--ILIIDTIKKIEYDMTKLFFK-- 133
+ +T+Q EK+ + IL+ I I D T+
Sbjct: 112 SLLPDLRGASPVQTALWKGYSASGITIQYIGEKMDEGDILLSQKIDIIPEDNTETLMNKI 171
Query: 134 -----------------------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFN 170
PQ++ +Y IK + +LDWSL A+ + +I A
Sbjct: 172 TDAGIESILRLLKAYDGKPFPAIPQNHAKATYCGKIKSEDRILDWSLGAEELHNRIRALY 231
Query: 171 PFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLL 229
P A T ++ K+ + K +LSIES +PG + ++ G+L CG +++L
Sbjct: 232 PNAIATT---RFREKRIGILKTKLSSLSIESNPEPGKLKRLD-KKGLLTQCGDGRFLEIL 287
Query: 230 ELQKNNKKKISATEFING 247
ELQ NK ++SA++F+NG
Sbjct: 288 ELQPENKNRMSASDFLNG 305
>gi|295691223|ref|YP_003594916.1| methionyl-tRNA formyltransferase [Caulobacter segnis ATCC 21756]
gi|295433126|gb|ADG12298.1| methionyl-tRNA formyltransferase [Caulobacter segnis ATCC 21756]
Length = 308
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 114/307 (37%), Gaps = 69/307 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I F GT A L L S H IV + ++P GRG +L SPV +A + +
Sbjct: 1 MRIAFLGTPDFAVTCLAELVASGHEIVAVYSQPPAPRGRGQELKPSPVHAFAEGLGLPVR 60
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNKIEFDIMI 91
P+S+K L H N LL + I
Sbjct: 61 TPVSMKTPEEIEAFKALDLDAAVVVAFGQILVKDVLEAPRHGCFNLHASLLPRWRGAAPI 120
Query: 92 VMGILPEDTSLTLQ-------------------------------NKLEKLSKILIIDTI 120
I+ D +Q +KL + L+ +
Sbjct: 121 QRAIMAGDPVTGVQVMRMSEGLDEGPILMSEQVAIAADDTAATLHDKLATVGARLLPVAL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
IE ++ + PQS G +YA IK EA +DW+ A + R I +PFPGA +
Sbjct: 181 AAIEREVVR--ETPQSEDGVTYAKKIKSAEARIDWTRPAAEVDRHIRGLSPFPGA---WF 235
Query: 181 SYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKIS 240
++K +++ KA +E+ + + +L+ CG+ I+LL+ Q+ K
Sbjct: 236 EAPSEKGPVRV-KALLSRVEAASG---VAGTALDDALLIACGEASIRLLKAQREGKGVQD 291
Query: 241 ATEFING 247
A F G
Sbjct: 292 AETFTRG 298
>gi|254483297|ref|ZP_05096528.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2148]
gi|214036392|gb|EEB77068.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2148]
Length = 321
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PE T+ L +KL L++ + +E + N +YA I K EA LD
Sbjct: 158 IGPETTAAALHDKLASQGAPLLVKVLSDLERYQANATAQNDENA--NYASKILKGEAELD 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALS-IESTKKPGTILNVNF 213
W+ +A T+ R I AFNPFP + Q ++ +K+W+A A T+ GTIL +
Sbjct: 216 WTQAATTLDRAIRAFNPFP---VCFTHLQGQR--IKVWQAQAAGNAPLTEAAGTILRAD- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
NGILV CG+ + + LQ K ++A + +NG
Sbjct: 270 RNGILVNCGEGQLNIQRLQLPGGKPLTADQVLNG 303
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT +A L L SEH ++ + T+PD +GRG KL SPVKK AL+ I +
Sbjct: 4 LKLIFAGTPDFSAIHLGALIESEHQLIAVYTQPDRPAGRGKKLQASPVKKLALEQGIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP SL+ + L + D+M+V+ ILP +
Sbjct: 64 QPQSLR--------DPQEQACLAALGADVMVVVAYGLILPAE 97
>gi|338737487|ref|YP_004674449.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase
[Hyphomicrobium sp. MC1]
gi|337758050|emb|CCB63873.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Hyphomicrobium sp. MC1]
Length = 338
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+ T+ L + L KL L+++ + K+E +P G +YA I K+EA +D
Sbjct: 184 ISPDMTAGELHDILSKLGAELMVEALGKLEAGTLACVRQPDE--GATYAAKIDKSEARID 241
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
+S SAK + I +PFPGA + IS K + +K+ A ++ + PGT+++
Sbjct: 242 FSRSAKEVADHIRGLSPFPGA-WFEISLGGKPERIKVLLAAV--VDGSGAPGTLID---- 294
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ + + CG I++++LQ+ K+ ++A++F+ G
Sbjct: 295 DRLTIACGSGAIRIVKLQRAGKQPMAASDFLRG 327
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+F GT + +LD + + H +V + ++P +GRGM SPV + A I +
Sbjct: 30 LKIVFMGTPDFSVPVLDAVVAAGHEVVAVYSQPPRPAGRGMAEAKSPVHRRAEALGIPVR 89
Query: 61 QPISLKLN 68
P++ K N
Sbjct: 90 TPVNFKSN 97
>gi|163845147|ref|YP_001622802.1| methionyl-tRNA formyltransferase [Brucella suis ATCC 23445]
gi|189044502|sp|A9WW44.1|FMT_BRUSI RecName: Full=Methionyl-tRNA formyltransferase
gi|163675870|gb|ABY39980.1| methionyl-tRNA formyltransferase [Brucella suis ATCC 23445]
Length = 306
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 128/308 (41%), Gaps = 70/308 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR-GMKLNFSPVKKYA------- 52
M+++F GT + IL + + +V T+P +GR G++L SPV + A
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 53 -----------------LKHSIKIIQPISLKLN---------GKYHKIAN---------- 76
L+ + I+ L L G Y+ A+
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 77 ----------ETHKLLNKIE--FDIMIV-----MGILPEDTSLTLQNKLEKLSKILIIDT 119
ET ++ K++ D +V + I P+ T+ L ++L + L+I
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGLVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+ +E + L +PQ+ G +YA I K EA +DWS AK + I +PFPGA +
Sbjct: 181 LGALERE--SLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGA---W 235
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
+ ++ + E + PGT+L+ + + + CG+ ++L LQ + K +
Sbjct: 236 CEMEINGAVERVKLQRSTLGEGSGAPGTVLD----DRLTIACGEGAVRLATLQHSGGKPL 291
Query: 240 SATEFING 247
A EF+ G
Sbjct: 292 PAQEFLRG 299
>gi|148259427|ref|YP_001233554.1| methionyl-tRNA formyltransferase [Acidiphilium cryptum JF-5]
gi|166214867|sp|A5FVK3.1|FMT_ACICJ RecName: Full=Methionyl-tRNA formyltransferase
gi|146401108|gb|ABQ29635.1| formyltetrahydrofolate deformylase [Acidiphilium cryptum JF-5]
Length = 301
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 17/153 (11%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I PEDT + L ++L L L+I K ++ + + PQ G +YAP + K +A +D
Sbjct: 156 IGPEDTMVDLLDRLADLGAALVI---KVLDGNFPPV---PQPEGGVTYAPKLSKADAEID 209
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I+R+I AF P+PG +T + LKI +A + + +PGT+L+
Sbjct: 210 WSASAAVILRRIRAFRPWPGTETRL-----DGEALKIIRAEPAAGQG--EPGTVLD---- 258
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ + + CG I+ +Q+ + + A F+ G
Sbjct: 259 DRLAIACGDAAIRPTLVQRAGRAAMQAEAFLRG 291
>gi|448236292|ref|YP_001573151.2| hypothetical protein SARI_04220 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
Length = 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEGATQSPPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAHDLLN---SRREWFI 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVMAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|410943114|ref|ZP_11374855.1| methionyl-tRNA formyltransferase [Gluconobacter frateurii NBRC
101659]
Length = 303
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 125/308 (40%), Gaps = 76/308 (24%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT A L L + H IV + T+P +GRG + SPV + A I++
Sbjct: 1 MRLIFMGTPDFAVPALHALMAAGHEIVAVYTQPPRPAGRGKAVRRSPVHEAAEAAGIEVR 60
Query: 61 QPISLKLNGKYHK----------------------------------------------- 73
P ++ + H+
Sbjct: 61 TPARVRKDVAEHEAFAALNADAAVVAAYGLILPKAMLDAPRLGCLNIHASLLPRWRGASP 120
Query: 74 -----IANETHKLLNKIEFDIMIVMG--ILPEDTSLT-------LQNKLEKLSKILIIDT 119
+A ++ ++ ++ D + G +L E T ++ L ++L ++ LI+
Sbjct: 121 IQSSIVAGDSQSGVSIMQMDEGLDTGAVLLEEATPISASDTASTLHDRLAEIGGRLIVRA 180
Query: 120 IKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYY 179
+++ + PQ G +YA ++K+ + +DWS S + I R+I P+PGA T
Sbjct: 181 LQE------QPVAVPQPEEGVTYAHMLKREDGRIDWSRSCEEIDRQIRGLTPWPGAFTTL 234
Query: 180 ISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKI 239
LKI A + +S GT ++ + + + CG +++ +QK + +
Sbjct: 235 -----DDVVLKIGAATPVPEQSGSDAGTAID----DALTIACGTGALRIERIQKPGRSMM 285
Query: 240 SATEFING 247
+A++F+ G
Sbjct: 286 NASDFVRG 293
>gi|417520977|ref|ZP_12182775.1| Methionyl-tRNA formyltransferase, partial [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|353642568|gb|EHC86984.1| Methionyl-tRNA formyltransferase, partial [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
Length = 199
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 43 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-TPEAQNEALVTHAEKLSKEEARID 100
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + + +K+W+A + + PGTIL
Sbjct: 101 WSLSAAQLERCIRAFNPWP------MSWLEIDGQPVKVWQASVIEDATQSLPGTILAAT- 153
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 154 KQGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 193
>gi|389799085|ref|ZP_10202089.1| methionyl-tRNA formyltransferase [Rhodanobacter sp. 116-2]
gi|388443710|gb|EIL99847.1| methionyl-tRNA formyltransferase [Rhodanobacter sp. 116-2]
Length = 312
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT +L ++L L ++ + +++ T L PQ G +YA + K EA LD+S
Sbjct: 163 DDTGGSLHDRLATLGAEVLAEGLRRTLAGET-LAATPQPETGVTYAHKLDKAEAKLDFSR 221
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AF+P+P + + + L+IW A A+ + PG++L +GI
Sbjct: 222 PAIELERQVRAFDPWP-----VAAGEIAGEPLRIWAARAIEADHHAAPGSVLAAG-RDGI 275
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ CG+ +++ +Q+ ++I AT+++N
Sbjct: 276 DLACGQGALRVSAVQRAGGRRIGATDYLN 304
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT + L+ S +V + T+PD +GRG +L SPVK+ AL + +
Sbjct: 6 LRVVFAGTPEFSVPCLEACRASGAEVVAVYTQPDRPAGRGRQLAESPVKRAALATGLAVE 65
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL 96
QP SLK ++A+ LL + + +++ +L
Sbjct: 66 QPESLKPAEVQQRLADYRPDLLVVVAYGLILPRKVL 101
>gi|385323262|ref|YP_005877701.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 8013]
gi|261391649|emb|CAX49097.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 8013]
Length = 308
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ + + L ++ ++ +++++ +L Q G +YA ++K EA +D
Sbjct: 156 IRPTDTANEVHDALMEIGAAAVVADLQQLQSK-GRLNAVKQPEEGVTYAQKLRKEEARID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I RKI AFNP P A ++ YQ K +KI +A ++ + G +L+ +
Sbjct: 215 WSESAAVIERKIRAFNPVPAA---WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG+N +K+ ELQ ++++ F G
Sbjct: 267 DGLVVACGENALKITELQPAGGRRMNIAAFAAG 299
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++E D+M+V ILP+D
Sbjct: 61 QPEKLRNNA-------EALQMLKEVEADVMVVAAYGLILPQD 95
>gi|158422421|ref|YP_001523713.1| methionyl-tRNA formyltransferase [Azorhizobium caulinodans ORS 571]
gi|158329310|dbj|BAF86795.1| methionyl-tRNA formyltransferase [Azorhizobium caulinodans ORS 571]
Length = 307
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+ T+ L ++L + L+ + +E L F PQ + G YA I+K EA +D
Sbjct: 156 IGPDMTAGELHDRLSYIGADLMGRALSALERG--GLDFTPQPDEGIVYASKIEKAEARID 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS A + I +PFPGA + + + + K L+ A + T PGT L+
Sbjct: 214 WSRPAAEVHNTIRGLSPFPGAWFPFGADEARVKVLR-----ASLADGTGAPGTALD---- 264
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ + + CG ++L ELQK K+ +SA F+NG
Sbjct: 265 DQLTIACGTGAVRLTELQKAGKQPMSAATFLNG 297
>gi|213622809|ref|ZP_03375592.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 212
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 56 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-TPEAQNEALVTHAEKLSKEEARID 113
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + + +K+W+A + + PGTIL
Sbjct: 114 WSLSAAQLERCIRAFNPWP------MSWLEIDGQPVKVWQASVIEDATQSLPGTILAAT- 166
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 167 KQGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 206
>gi|198245996|ref|YP_002217371.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|375120885|ref|ZP_09766052.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|445144551|ref|ZP_21387148.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445155493|ref|ZP_21392323.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|238690318|sp|B5FJI3.1|FMT_SALDC RecName: Full=Methionyl-tRNA formyltransferase
gi|197940512|gb|ACH77845.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326625152|gb|EGE31497.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|444846718|gb|ELX71874.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444848967|gb|ELX74085.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
Length = 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-APEAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLHADVMVVVAYGLILP 96
>gi|89902618|ref|YP_525089.1| methionyl-tRNA formyltransferase [Rhodoferax ferrireducens T118]
gi|123091052|sp|Q21RP5.1|FMT_RHOFD RecName: Full=Methionyl-tRNA formyltransferase
gi|89347355|gb|ABD71558.1| methionyl-tRNA formyltransferase [Rhodoferax ferrireducens T118]
Length = 323
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IFAGT A L L+ H I L+LT+PD +GRGMKL S VK++AL H + +
Sbjct: 1 MRLIFAGTPEFARVALAQLHAGGHEIALVLTQPDRPAGRGMKLQASAVKQFALDHGLALA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+L+GKY + A + L + D M+V ILP+
Sbjct: 61 QPRSLRLDGKYPEDAAAAREALVAAQADAMVVAAYGLILPQ 101
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ +L ++L +L L++ + + + + Q+ G +YAP I+K+EA +DW+
Sbjct: 167 DTTGSLHDRLAELGAQLMLQVLAQAVHGSLQPVA--QAAQGVTYAPKIEKHEAAIDWTQP 224
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH-ALSIESTKKP-GTILNVNFHNG 216
A I ++I AFNPFPGA + LKIW A A + K G+IL V G
Sbjct: 225 AAVIAQRIRAFNPFPGATAVL-----NGETLKIWLADVAPGVPPVSKEFGSILAVA-PVG 278
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFING 247
I VV K+++ + +LQ+ K++ EF+ G
Sbjct: 279 IEVVAMKSIVNITQLQRPGGKRLGVAEFLRG 309
>gi|456358367|dbj|BAM92812.1| methionyl-tRNA formyltransferase [Agromonas oligotrophica S58]
Length = 311
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
+GI T+ L +KL ++ L++ + +E L Q+ G +YA I+K EA
Sbjct: 156 LGITDAMTASDLHDKLARIGADLMVRAMAALERG--GLTLTKQAEDGVTYAAKIEKAEAR 213
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
+DW+ A ++R I+ +PFPGA + ++ + LKI + + +PGT+L+
Sbjct: 214 IDWARPAHAVLRHIHGLSPFPGAWS-EVALDGEAVRLKILRCQ--QVTGAGEPGTVLDEQ 270
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ + CG I+++ELQ+ K + A +F+ G
Sbjct: 271 ----LTIACGDGAIRIVELQRAGKAPMKAGDFLRG 301
>gi|437822754|ref|ZP_20843464.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435306472|gb|ELO81762.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-APEAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|433466228|ref|ZP_20423691.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 87255]
gi|432205016|gb|ELK61047.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 87255]
Length = 308
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ + + L ++ ++ +++++ +L Q G +YA ++K EA +D
Sbjct: 156 IQPTDTANEVHDALMEIGAAAVVADLQQLQSK-GRLNAVKQPEEGVTYAQKLRKEEARID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I RKI AFNP P A ++ YQ K +KI +A ++ + G +L+ +
Sbjct: 215 WSESAAVIERKIRAFNPVPAA---WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG+N +K+ ELQ ++++ F G
Sbjct: 267 DGLVVACGENALKITELQPAGGRRMNIAAFAAG 299
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++E D+M+V ILP+D
Sbjct: 61 QPEKLRNNA-------EALQMLKEVEADVMVVAAYGLILPQD 95
>gi|417361078|ref|ZP_12135050.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|417534326|ref|ZP_12188121.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|353585029|gb|EHC44989.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353658972|gb|EHC99011.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
Length = 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL S VK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSQVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|385339156|ref|YP_005893028.1| methionyl-tRNA formyltransferase [Neisseria meningitidis G2136]
gi|416199748|ref|ZP_11619457.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 961-5945]
gi|421558186|ref|ZP_16004070.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 92045]
gi|421560263|ref|ZP_16006122.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2657]
gi|254671148|emb|CBA08203.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha153]
gi|325143272|gb|EGC65610.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 961-5945]
gi|325197400|gb|ADY92856.1| methionyl-tRNA formyltransferase [Neisseria meningitidis G2136]
gi|402338580|gb|EJU73811.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 92045]
gi|402340436|gb|EJU75636.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2657]
Length = 308
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ + + L ++ ++ +++++ +L Q G +YA ++K EA +D
Sbjct: 156 IQPTDTANEVHDALMEIGAAAVVADLQQLQSK-GRLNAVKQPEEGVTYAQKLRKEEARID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I RKI AFNP P A ++ YQ K +KI +A ++ + G +L+ +
Sbjct: 215 WSESAAVIERKIRAFNPVPAA---WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG+N +K+ ELQ ++++ F G
Sbjct: 267 DGLVVACGENALKITELQPAGGRRMNIAAFAAG 299
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++E D+M+V ILP+D
Sbjct: 61 QPEKLRNNA-------EALQMLKEVEADVMVVAAYGLILPQD 95
>gi|160867386|gb|ABX24009.1| hypothetical protein SARI_04220 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 268
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 112 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-TPEAQNEALVTHAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + + +K+W+A + + PGTIL
Sbjct: 170 WSLSAAQLERCIRAFNPWP------MSWLEIDGQPVKVWQASVIEGATQSPPGTILAAT- 222
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 223 KQGIQVATGKGILNLLSLQPAGKKAMSAHDLLN---SRREWFI 262
>gi|423141923|ref|ZP_17129561.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379049852|gb|EHY67745.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPASLRPQENRHLVAD--------LHADVMVVVAYGLILP 96
>gi|417344166|ref|ZP_12124569.1| Methionyl-tRNA formyltransferase, partial [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|357954502|gb|EHJ80667.1| Methionyl-tRNA formyltransferase, partial [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 207
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 51 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 108
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + + +K+W+A + + PGTIL
Sbjct: 109 WSLSAAQLERCIRAFNPWP------MSWLEIDGQPVKVWQASVIEDATQSLPGTILAAT- 161
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 162 KQGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 201
>gi|455644207|gb|EMF23312.1| methionyl-tRNA formyltransferase [Citrobacter freundii GTC 09479]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ D+ + G I EDTS +L +KL L +I+T+K++
Sbjct: 130 AGDTETGVTIMQMDVGLDTGDMLLKLSCPITAEDTSGSLYDKLADLGPQGLIETLKQLAA 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
+ +S + ++A + K EA +DWSLSA + R I AFNP+P ++ +
Sbjct: 190 GTINPVVQDESLV--THAEKLSKEEARIDWSLSAVQLERCIRAFNPWP---MSWLEIDGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+W+A ++ + PGTIL GI V G ++ L+ LQ KK +SA + +
Sbjct: 245 P--VKVWQASVIAENTQAAPGTILEAT-KQGIQVATGDGILNLVSLQPAGKKAMSAQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLRADVMVVVAYGLILP 96
>gi|416106944|ref|ZP_11590136.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348005841|gb|EGY46310.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
Length = 319
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + ++TS L KL +++ +++ + + D T + Q
Sbjct: 147 DTGDMLHKVYCDITL------QETSAGLYAKLAEIAPAALVEVLDHLT-DGT-FTAERQD 198
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 199 AAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQATV 258
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 259 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 307
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 5 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 65 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 97
>gi|168264712|ref|ZP_02686685.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205346876|gb|EDZ33507.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLHADVMVVVAYGLILP 96
>gi|255657699|ref|ZP_05403108.1| methionyl-tRNA formyltransferase [Mitsuokella multacida DSM 20544]
gi|260849887|gb|EEX69894.1| methionyl-tRNA formyltransferase [Mitsuokella multacida DSM 20544]
Length = 312
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 16/172 (9%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L K EF I P+ T + + L +L ++I+T++ + K PQ+
Sbjct: 145 DTGDMLLKAEFPIG------PDTTLEEVHDGLMELGAKVLIETLEALSAGTLKRI--PQT 196
Query: 137 NIGES-YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAH 195
GES YAP++ K + W+ AK I + + +PGA T+ KK+ KIW+
Sbjct: 197 --GESNYAPMLTKETGHIHWAEPAKKIHDLVRGLDSWPGAYTFL----GGKKY-KIWRTR 249
Query: 196 ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ ++ ++PGTIL + G+ V G V+++ ELQ KK+++A +++NG
Sbjct: 250 CTAEKTAEQPGTILRADKKEGLFVAAGDGVLEVTELQAPGKKRMAARDYLNG 301
>gi|300773586|ref|ZP_07083455.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300759757|gb|EFK56584.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 325
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 130/319 (40%), Gaps = 89/319 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIF GT A A L L +S N+V ++T PD +GRG KL+ S VKK+A++H I ++
Sbjct: 18 MRIIFMGTPDFAVASLKALLDSGENVVAVVTVPDKPAGRGQKLHESAVKKFAVEHQIPVL 77
Query: 61 QPISLK------------------------------------------LNGKYHKIANET 78
QP+ LK L +Y A
Sbjct: 78 QPVRLKDPEFLKELKAFNADLQVVVAFRMLPELVWDMPAKGTINVHGSLLPQYRGAAPIN 137
Query: 79 HKLLN--------------KIEFDIMIVMGILP---EDTSLTLQNKLEKLSKILIIDTIK 121
H ++N +I+ ++ G +P D + T+ +KL +++ TIK
Sbjct: 138 HAIINGEEKTGVTTFLLQHEIDTGNILFKGEVPITENDNAGTIHDKLMHKGAEVLLQTIK 197
Query: 122 KIEYDMTKLFFKPQSNIGES----YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKT 177
++ D L PQ + E +AP I K + +++W S T+ I +P+P A T
Sbjct: 198 AMKAD--SLTPVPQDTLIEGTTLKHAPKIFKEDCLINWDKSTATVFNLIRGLSPYPAAFT 255
Query: 178 YYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIK---------L 228
Y K LKI++ + KP + G V GK +K L
Sbjct: 256 YL-----DGKVLKIYEVQ----KEIAKP------DIQAGRYVTDGKTYLKYATQDGYIHL 300
Query: 229 LELQKNNKKKISATEFING 247
LQ KK++ EF+ G
Sbjct: 301 KALQIEGKKRMLTDEFLRG 319
>gi|260756223|ref|ZP_05868571.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 6 str. 870]
gi|260882047|ref|ZP_05893661.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 9 str. C68]
gi|297249203|ref|ZP_06932904.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260676331|gb|EEX63152.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 6 str. 870]
gi|260871575|gb|EEX78644.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 9 str. C68]
gi|297173072|gb|EFH32436.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 306
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+ T+ L ++L + L+I + +E + L +PQ+ G +YA I K EA +D
Sbjct: 156 ITPDMTAGELHDRLSMIGADLMIRALGALERE--SLALQPQAEEGVTYAAKIDKAEARID 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS AK + I +PFPGA + + ++ + E + PGT+L+
Sbjct: 214 WSKPAKDVHNSIRGLSPFPGA---WCEMEINGAVERVKLQRSTLGEGSGAPGTVLD---- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNI 252
+ + + CG+ ++L LQ++ K + A EF+ G C+ +
Sbjct: 267 DRLTIACGEGAVRLATLQRSGGKPLPAQEFLRGQCVTKV 305
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSG-RGMKLNFSPVKKYALKHSIKI 59
M+++F GT + IL + + +V T+P +G RG++L SPV + A + I +
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
P SLK E + +E D+ IV+
Sbjct: 61 FTPTSLK--------GAEEQDVFASLEADVAIVV 86
>gi|404491797|ref|YP_006715903.1| methionyl-tRNA formyltransferase [Pelobacter carbinolicus DSM 2380]
gi|77543943|gb|ABA87505.1| methionyl-tRNA formyltransferase [Pelobacter carbinolicus DSM 2380]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
E+T+ L ++L L + + +T++++ D T L + Q + YAP++KK + +DWS
Sbjct: 164 EETAGELHDRLALLGREAMEETLRRL-CDGT-LRSEAQDDAQSCYAPMMKKEDGCIDWSR 221
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A I + +P+PGA T + + LK+ + A S +PGT+++ + G+
Sbjct: 222 PAGVIHNLVRGLSPWPGAYTRW-----NGQTLKLGRTVAEE-GSEAEPGTVVSAD-ETGV 274
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+ CG+ V+++ ELQ KKK+ A +F+ G
Sbjct: 275 CIACGEGVLRVRELQLAGKKKLPAGDFLRG 304
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++ IF GT A L L + ++ + T+PD GRG L PVK+ AL+H++ ++
Sbjct: 7 IRTIFMGTPEFALPTLQGLLEAGVDLCGVFTQPDRRKGRGKVLAPPPVKELALRHNLPVL 66
Query: 61 QPISLK 66
QP L+
Sbjct: 67 QPEKLR 72
>gi|414071412|ref|ZP_11407381.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. Bsw20308]
gi|410806132|gb|EKS12129.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. Bsw20308]
Length = 317
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
+TS +L KL +L +I+TI K+ ++ +PQ++ +YA + K EA +DWS+S
Sbjct: 163 ETSASLYTKLAELGPDALIETINKLANG--EITPEPQNDELANYAKKLSKEEANIDWSMS 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A I R I +FNP+P T Q + +KI++A S + PG IL+ + NG++
Sbjct: 221 ALQIERNIRSFNPWPVCFT-----QMSGQTVKIYQAQVTS--QSGNPGQILSSD-KNGVI 272
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG++ + + +LQ KK ++ +F+NG
Sbjct: 273 VACGEHALCITQLQPQGKKPMAINDFLNG 301
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L SEH IV + ++PD +GRG KL S VK AL+H++ +
Sbjct: 5 LRIIFAGTPDFAARHLQALIQSEHQIVGVYSQPDRPAGRGKKLKASEVKALALEHNLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK +E L + DIMIV+ ILP
Sbjct: 65 QPQSLK--------NDEALAELTSLNADIMIVVAYGLILP 96
>gi|417937621|ref|ZP_12580921.1| methionyl-tRNA formyltransferase [Streptococcus infantis SK970]
gi|343391885|gb|EGV04458.1| methionyl-tRNA formyltransferase [Streptococcus infantis SK970]
Length = 311
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 70/311 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L + + + IV ++T+PD GR + +PVK+ A + + I
Sbjct: 3 KLIFMGTPDFSATVLKGLLSDDRYEIVAVVTQPDRAVGRKKVIQETPVKQAAKEAGLPIY 62
Query: 61 QPISLKLNGKYHKIANE--------------THKLLNKIEFDIMIVMGILP--------- 97
QP L + + I N KLL+ ++F + + +LP
Sbjct: 63 QPEKLSGSPEMEAIMNLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGGAPIH 122
Query: 98 ------------------------------------EDTSLTLQNKLEKLSKILIIDTIK 121
ED TL KL + + L++DT+
Sbjct: 123 YALIQGDKEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAVVGRDLLLDTLP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ +PQ +++P IK E LDW+++ + + +I NP+P A T+
Sbjct: 183 A--YIAGEIQPQPQDPNQVTFSPNIKPEEEKLDWNMTNRQLFNQIRGMNPWPVAHTFL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
K KI++ AL +E PG IL++ ++V + + L ++Q K K+
Sbjct: 239 ---KGDRFKIYE--ALPVEGQGNPGEILSIGKKE-LIVATAEGALSLKQVQPAGKPKMDI 292
Query: 242 TEFINGCIKNI 252
F+NG +++
Sbjct: 293 VSFLNGVGRSL 303
>gi|167554204|ref|ZP_02347945.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205321536|gb|EDZ09375.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD + S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDAMLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|16766696|ref|NP_462311.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56415327|ref|YP_152402.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62181913|ref|YP_218330.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161616433|ref|YP_001590398.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167995182|ref|ZP_02576272.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234464|ref|ZP_02659522.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168239760|ref|ZP_02664818.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168245234|ref|ZP_02670166.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194442945|ref|YP_002042659.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451913|ref|YP_002047432.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194471458|ref|ZP_03077442.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736618|ref|YP_002116351.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250647|ref|YP_002148328.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262838|ref|ZP_03162912.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197364257|ref|YP_002143894.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|204931414|ref|ZP_03222083.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|224585202|ref|YP_002639001.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|374978045|ref|ZP_09719388.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|375116253|ref|ZP_09761423.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|378446785|ref|YP_005234417.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378452237|ref|YP_005239597.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378701301|ref|YP_005183259.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378986001|ref|YP_005249157.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378990712|ref|YP_005253876.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379702666|ref|YP_005244394.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383498053|ref|YP_005398742.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386593084|ref|YP_006089484.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|416424234|ref|ZP_11691491.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416435014|ref|ZP_11697984.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416437075|ref|ZP_11698600.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416448821|ref|ZP_11706525.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416453440|ref|ZP_11709586.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416461761|ref|ZP_11715463.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416462972|ref|ZP_11715743.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416476111|ref|ZP_11720955.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416489901|ref|ZP_11726503.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416502488|ref|ZP_11732800.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416510252|ref|ZP_11736927.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416516403|ref|ZP_11739085.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416543701|ref|ZP_11752426.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416559523|ref|ZP_11760748.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416567100|ref|ZP_11764183.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416575690|ref|ZP_11768506.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416582084|ref|ZP_11772422.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416595300|ref|ZP_11781113.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416602553|ref|ZP_11785349.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416606255|ref|ZP_11787629.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416613522|ref|ZP_11792076.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416618638|ref|ZP_11794651.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416634991|ref|ZP_11802842.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416641508|ref|ZP_11805500.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416647708|ref|ZP_11808538.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416659334|ref|ZP_11814771.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416668368|ref|ZP_11818865.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416672430|ref|ZP_11820692.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416692149|ref|ZP_11826349.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416704456|ref|ZP_11830278.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416714221|ref|ZP_11837613.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416720710|ref|ZP_11842311.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416721773|ref|ZP_11842894.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416729762|ref|ZP_11848247.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416741934|ref|ZP_11855460.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416747465|ref|ZP_11858239.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416754115|ref|ZP_11861134.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416763311|ref|ZP_11867000.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416766415|ref|ZP_11869110.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|417430424|ref|ZP_12161121.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|417513914|ref|ZP_12177845.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|417536781|ref|ZP_12189837.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|418482261|ref|ZP_13051283.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418489968|ref|ZP_13056526.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418495172|ref|ZP_13061616.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418498825|ref|ZP_13065238.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418503542|ref|ZP_13069902.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418510119|ref|ZP_13076407.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418515109|ref|ZP_13081297.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|418525412|ref|ZP_13091393.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418789937|ref|ZP_13345719.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418792628|ref|ZP_13348369.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418800387|ref|ZP_13356045.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418806610|ref|ZP_13362180.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418810772|ref|ZP_13366309.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418818465|ref|ZP_13373937.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418823797|ref|ZP_13379198.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418827008|ref|ZP_13382175.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418829207|ref|ZP_13384194.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418837897|ref|ZP_13392755.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418841709|ref|ZP_13396526.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418846623|ref|ZP_13401390.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418851535|ref|ZP_13406246.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418854708|ref|ZP_13409374.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418861139|ref|ZP_13415708.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418870619|ref|ZP_13425033.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419730651|ref|ZP_14257586.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419734816|ref|ZP_14261700.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419741485|ref|ZP_14268177.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419743266|ref|ZP_14269931.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419750257|ref|ZP_14276721.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421571759|ref|ZP_16017427.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421575476|ref|ZP_16021089.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421578887|ref|ZP_16024457.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421586044|ref|ZP_16031527.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|421882971|ref|ZP_16314219.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|422027636|ref|ZP_16373968.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422032678|ref|ZP_16378777.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427554652|ref|ZP_18929270.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427572289|ref|ZP_18933880.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427593804|ref|ZP_18938788.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427617902|ref|ZP_18943699.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427641324|ref|ZP_18948553.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427657664|ref|ZP_18953300.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427662882|ref|ZP_18958172.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427678039|ref|ZP_18963079.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|440763489|ref|ZP_20942528.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440766153|ref|ZP_20945153.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440772258|ref|ZP_20951164.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|452122780|ref|YP_007473028.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|21542048|sp|Q8ZLM6.3|FMT_SALTY RecName: Full=Methionyl-tRNA formyltransferase
gi|73919416|sp|Q57J63.3|FMT_SALCH RecName: Full=Methionyl-tRNA formyltransferase
gi|73919417|sp|Q5PIT7.3|FMT_SALPA RecName: Full=Methionyl-tRNA formyltransferase
gi|189044562|sp|A9N8B2.1|FMT_SALPB RecName: Full=Methionyl-tRNA formyltransferase
gi|238690059|sp|B5F7R4.1|FMT_SALA4 RecName: Full=Methionyl-tRNA formyltransferase
gi|238690673|sp|B4TJX8.1|FMT_SALHS RecName: Full=Methionyl-tRNA formyltransferase
gi|238690739|sp|B5BGV4.1|FMT_SALPK RecName: Full=Methionyl-tRNA formyltransferase
gi|238693519|sp|B4SUQ9.1|FMT_SALNS RecName: Full=Methionyl-tRNA formyltransferase
gi|238693719|sp|B4TXB1.1|FMT_SALSV RecName: Full=Methionyl-tRNA formyltransferase
gi|254789368|sp|C0PZV0.1|FMT_SALPC RecName: Full=Methionyl-tRNA formyltransferase
gi|16421963|gb|AAL22270.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56129584|gb|AAV79090.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129546|gb|AAX67249.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161365797|gb|ABX69565.1| hypothetical protein SPAB_04248 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401608|gb|ACF61830.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194410217|gb|ACF70436.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457822|gb|EDX46661.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712120|gb|ACF91341.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197095734|emb|CAR61304.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197214350|gb|ACH51747.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197241093|gb|EDY23713.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197287580|gb|EDY26972.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|204319842|gb|EDZ05052.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205327099|gb|EDZ13863.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331623|gb|EDZ18387.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336018|gb|EDZ22782.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|224469730|gb|ACN47560.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261248564|emb|CBG26402.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995616|gb|ACY90501.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159950|emb|CBW19469.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914430|dbj|BAJ38404.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226459|gb|EFX51509.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322615052|gb|EFY11976.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617339|gb|EFY14240.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625561|gb|EFY22386.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626403|gb|EFY23212.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632085|gb|EFY28838.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635036|gb|EFY31759.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643263|gb|EFY39830.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646653|gb|EFY43160.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649999|gb|EFY46418.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322652716|gb|EFY49056.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659527|gb|EFY55771.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322665531|gb|EFY61718.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670425|gb|EFY66564.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670498|gb|EFY66632.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675074|gb|EFY71157.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681611|gb|EFY77640.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685955|gb|EFY81944.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322716399|gb|EFZ07970.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323131765|gb|ADX19195.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|323195825|gb|EFZ80998.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196419|gb|EFZ81570.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202704|gb|EFZ87743.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323211255|gb|EFZ96100.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216036|gb|EGA00767.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323223473|gb|EGA07801.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226797|gb|EGA10987.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231841|gb|EGA15951.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233206|gb|EGA17301.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237273|gb|EGA21338.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245508|gb|EGA29507.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249014|gb|EGA32936.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250637|gb|EGA34518.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256866|gb|EGA40580.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323263015|gb|EGA46562.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266015|gb|EGA49510.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272772|gb|EGA56175.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|332990259|gb|AEF09242.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353615127|gb|EHC66748.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|353635368|gb|EHC81700.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|353669634|gb|EHD06479.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|363549376|gb|EHL33730.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363562420|gb|EHL46518.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363575878|gb|EHL59724.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363579114|gb|EHL62908.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366059721|gb|EHN23989.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366064234|gb|EHN28435.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366068339|gb|EHN32483.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366072630|gb|EHN36719.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366073068|gb|EHN37146.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366077148|gb|EHN41168.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366077223|gb|EHN41242.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366830143|gb|EHN57016.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372206677|gb|EHP20180.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|379987479|emb|CCF86492.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|380464874|gb|AFD60277.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381291395|gb|EIC32637.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381293041|gb|EIC34213.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381295637|gb|EIC36746.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381307325|gb|EIC48183.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|381311751|gb|EIC52561.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|383800125|gb|AFH47207.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392759539|gb|EJA16390.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392761212|gb|EJA18041.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392767408|gb|EJA24177.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392780458|gb|EJA37110.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392781768|gb|EJA38406.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392784633|gb|EJA41221.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392785462|gb|EJA42038.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392797443|gb|EJA53750.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392802473|gb|EJA58686.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392804887|gb|EJA61026.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392808070|gb|EJA64125.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392809832|gb|EJA65861.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392817424|gb|EJA73338.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392823743|gb|EJA79537.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392825301|gb|EJA81053.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392830206|gb|EJA85862.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|402519314|gb|EJW26676.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402522516|gb|EJW29840.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402522858|gb|EJW30177.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402528769|gb|EJW36018.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414013917|gb|EKS97779.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414015180|gb|EKS99006.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414015491|gb|EKS99305.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414028657|gb|EKT11834.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414030035|gb|EKT13177.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414032161|gb|EKT15173.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414043520|gb|EKT26019.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414043738|gb|EKT26222.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414048733|gb|EKT30968.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414056582|gb|EKT38394.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|436419225|gb|ELP17104.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436419714|gb|ELP17588.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436423660|gb|ELP21467.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|451911784|gb|AGF83590.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|56698048|ref|YP_168419.1| methionyl-tRNA formyltransferase [Ruegeria pomeroyi DSS-3]
gi|73919418|sp|Q5LNI8.1|FMT_SILPO RecName: Full=Methionyl-tRNA formyltransferase
gi|56679785|gb|AAV96451.1| methionyl-tRNA formyltransferase [Ruegeria pomeroyi DSS-3]
Length = 301
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 117/303 (38%), Gaps = 67/303 (22%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++F GT + +L+ L + H I + +P +GRG K +PV AL +++
Sbjct: 1 MRVVFMGTPDFSVPVLEALVAAGHEIAAVYCQPPRPAGRGKKDRPTPVHARALDLGLEVR 60
Query: 61 QPISLK-----------------------------LNGKYHKIANETHKLLNKIEFDIMI 91
P+SLK L+ H N LL + I
Sbjct: 61 HPVSLKGAEAQADFAALGADVAVVVAYGLILPQAVLDAPRHGCLNIHASLLPRWRGAAPI 120
Query: 92 VMGILPEDTS-----LTLQNKLEKLSKIL--------------IIDTIKKIEYDM----- 127
I+ D + + ++ L+ +L + D + + D+
Sbjct: 121 HRAIMAGDEATGICIMQMEAGLDTGPVLLRSRTPIRAEETTGALHDRLSAMGADLIVEAL 180
Query: 128 ---TKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQN 184
+L +PQ G +YA I K EA +DW+ A I R+I +PFPGA T
Sbjct: 181 ARLPELTPEPQPEDGVTYAAKIDKAEARVDWTRPAVAIDRQIRGLSPFPGAWTEIAG--E 238
Query: 185 KKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+ K L A L E PG +L+ + + + CG I L+ LQ+ K A F
Sbjct: 239 RVKLL----ASRLD-EGQGTPGEVLD----DALTIACGTGAISLIRLQRAGKAAQDADIF 289
Query: 245 ING 247
+ G
Sbjct: 290 LRG 292
>gi|395231846|ref|ZP_10410123.1| methionyl-tRNA formyltransferase [Citrobacter sp. A1]
gi|421847961|ref|ZP_16281087.1| methionyl-tRNA formyltransferase [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424734279|ref|ZP_18162821.1| peptide deformylase [Citrobacter sp. L17]
gi|394714309|gb|EJF20288.1| methionyl-tRNA formyltransferase [Citrobacter sp. A1]
gi|411770646|gb|EKS54408.1| methionyl-tRNA formyltransferase [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422892093|gb|EKU31970.1| peptide deformylase [Citrobacter sp. L17]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 75 ANETHKLLNKIEFDIMIVMG---------ILPEDTSLTLQNKLEKLSKILIIDTIKKIEY 125
A +T + ++ D+ + G I EDTS +L +KL L +I+T+K++
Sbjct: 130 AGDTETGVTIMQMDVGLDTGDMLLKLSCPITAEDTSGSLYDKLADLGPQGLIETLKQLAA 189
Query: 126 DMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNK 185
+ +S + ++A + K EA +DWSLSA + R I AFNP+P ++ +
Sbjct: 190 GTINPVVQDESLV--THAEKLSKEEARIDWSLSAVQLERCIRAFNPWP---MSWLEIDGQ 244
Query: 186 KKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFI 245
+K+W+A ++ + PGTIL GI V G ++ L+ LQ KK +SA + +
Sbjct: 245 P--VKVWQASVIAENTQAAPGTILEAT-KQGIQVATGDGILNLVSLQPAGKKAMSAQDLL 301
Query: 246 N 246
N
Sbjct: 302 N 302
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S HN+V + T+PD +GRG KL SPVK A + I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLRADVMVVVAYGLILP 96
>gi|168468036|ref|ZP_02701873.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|200388391|ref|ZP_03215003.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|418760134|ref|ZP_13316295.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418767910|ref|ZP_13323966.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418768862|ref|ZP_13324904.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418774076|ref|ZP_13330047.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418782103|ref|ZP_13337970.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418784161|ref|ZP_13339999.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418802083|ref|ZP_13357714.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419787945|ref|ZP_14313646.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419794885|ref|ZP_14320491.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|195628883|gb|EDX48293.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|199605489|gb|EDZ04034.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|392613593|gb|EIW96048.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392618643|gb|EIX01038.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392732700|gb|EIZ89907.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392741483|gb|EIZ98583.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392743803|gb|EJA00869.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392744701|gb|EJA01745.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392751578|gb|EJA08526.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392754505|gb|EJA11421.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392778586|gb|EJA35258.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLHADVMVVVAYGLILP 96
>gi|16762875|ref|NP_458492.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144362|ref|NP_807704.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161459|ref|ZP_03347169.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213418737|ref|ZP_03351803.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
gi|213425784|ref|ZP_03358534.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213650880|ref|ZP_03380933.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|289824192|ref|ZP_06543787.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|378962279|ref|YP_005219765.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|21542046|sp|Q8Z1X0.3|FMT_SALTI RecName: Full=Methionyl-tRNA formyltransferase
gi|25320691|pir||AI1009 methionyl-tRNA formyltransferase (EC 2.1.2.9) [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16505182|emb|CAD09178.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29140000|gb|AAO71564.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|374356151|gb|AEZ47912.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HNIV + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|417368585|ref|ZP_12140074.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353586247|gb|EHC45880.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
Length = 174
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 18 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-APEAQNEALVTHAEKLSKEEARID 75
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + + +K+W+A + + PGTIL
Sbjct: 76 WSLSAAQLERCIRAFNPWP------MSWLEIDGQPVKVWQASVIEDATQSLPGTILAAT- 128
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 129 KQGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 168
>gi|429088356|ref|ZP_19151088.1| Methionyl-tRNA formyltransferase [Cronobacter universalis NCTC
9529]
gi|426508159|emb|CCK16200.1| Methionyl-tRNA formyltransferase [Cronobacter universalis NCTC
9529]
Length = 179
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DTS +L +KL +L ++ T++ + + + Q + +YA + K EA LD
Sbjct: 23 ITADDTSASLYDKLAQLGPQGLLATLEDLA--TGRAVPEKQDDAQATYAEKLSKEEARLD 80
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+LSA + R I AFNP+P ++++ + + +K+WKA + +S PG IL+
Sbjct: 81 WTLSAAQLERCIRAFNPWP--VSFFMV---EDQPVKVWKASVIRQQSNATPGAILDAG-R 134
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI + ++ L ELQ KK +SA + +N
Sbjct: 135 QGIQIATADGILNLEELQPAGKKPMSAQDLLN 166
>gi|423122394|ref|ZP_17110078.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5246]
gi|376392211|gb|EHT04876.1| methionyl-tRNA formyltransferase [Klebsiella oxytoca 10-5246]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 19/181 (10%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ I +DTS +L +KL +L +++T+ ++ T+ + ++
Sbjct: 147 DTGDMLHKLSCPIAA------QDTSASLYDKLAELGPQGLLETLTQLADGSTQPEVQDEA 200
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAH 195
+ +YA + K EA +DWSLSA + R I AFNP+P +S+ + ++ +K+W+A
Sbjct: 201 LV--TYAEKLSKEEARIDWSLSAAQLERCIRAFNPWP------MSWLEIDEQPVKVWQAS 252
Query: 196 ALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYF 255
++ S +PGTI+ GI V G ++ L LQ KK +SA + +N ++F
Sbjct: 253 VIAETSGAEPGTIVAAG-KQGIQVATGNGILNLESLQPAGKKAMSAQDLLN---SRREWF 308
Query: 256 I 256
I
Sbjct: 309 I 309
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +S H IV + T+PD +GRG KL SPVK A +++ +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGKKLMPSPVKVLAEANNLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L++ + D+M+V+ ILP
Sbjct: 65 QPASLR--------PQENQLLVSSLNADVMVVVAYGLILP 96
>gi|372267038|ref|ZP_09503086.1| methionyl-tRNA formyltransferase [Alteromonas sp. S89]
Length = 322
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
+T +L +KL L +++ + +E K + Q + +YA I K EA LDWS
Sbjct: 161 ETGGSLHDKLAGLGGPALLEALAMLESGTAK--PQVQDDALANYAGKITKEEARLDWSRP 218
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A + R + AFNPFP T Y + + L+++ A PGTIL+ + GIL
Sbjct: 219 ATELERLVRAFNPFPVCWTEYRDNKGMPQRLRVYAAKLEQGCHNDSPGTILSAD-DEGIL 277
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG+ ++L +LQ KK + E + G
Sbjct: 278 VACGREALRLTQLQLPGKKALPVAELLKG 306
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L TL ++EHN++ + ++PD +GRG KL SPVK+ AL+H I +
Sbjct: 3 LNIIFAGTPDFAAVHLQTLLDNEHNVIAVYSQPDRPAGRGKKLLASPVKQLALEHEIPVY 62
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL 96
QP+SL+ ++A +L+ + + +++ +L
Sbjct: 63 QPLSLRDEQAQQELAALNAELMVVVAYGLILPQVVL 98
>gi|359455368|ref|ZP_09244600.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. BSi20495]
gi|358047598|dbj|GAA80849.1| methionyl-tRNA formyltransferase [Pseudoalteromonas sp. BSi20495]
Length = 317
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
+TS +L KL +L +I+TI K+ ++ +PQ++ +YA + K EA +DWS+S
Sbjct: 163 ETSASLYTKLAELGPDALIETINKLANG--EITPEPQNDELANYAKKLSKEEANIDWSMS 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A I R I +FNP+P T Q + +KI++A S + PG IL+ + NG++
Sbjct: 221 ALQIERNIRSFNPWPVCFT-----QMSGQTVKIYQAQVTS--QSGNPGQILSSD-KNGVV 272
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG++ + + +LQ KK ++ +F+NG
Sbjct: 273 VACGEHALCITQLQPQGKKPMAINDFLNG 301
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L L SEH IV + ++PD +GRG KL S VK AL+H++ +
Sbjct: 5 LRIIFAGTPDFAARHLQALIQSEHQIVGVYSQPDRPAGRGKKLKASEVKALALEHNLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SLK +E L + DIMIV+ ILP
Sbjct: 65 QPQSLK--------NDEALAELTSLNADIMIVVAYGLILP 96
>gi|114568997|ref|YP_755677.1| methionyl-tRNA formyltransferase [Maricaulis maris MCS10]
gi|114339459|gb|ABI64739.1| methionyl-tRNA formyltransferase [Maricaulis maris MCS10]
Length = 311
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ +L ++L + ++ + +E L QS+ G +YA I +EA +DWS S
Sbjct: 161 DTAASLHDRLMEAGALMWPRALAALERG--SLEAVSQSSDGVTYARKISSDEARIDWSRS 218
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ + + +PFPGA + + + + +K+ A +S E+ PGT++ G+
Sbjct: 219 AEELSNHVRGLSPFPGA-WFEMPGEKRPVRVKVLLAEPVSGEAAAGPGTVI-----EGLT 272
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG+ ++L+ LQ+ K + A F+NG
Sbjct: 273 VACGEGALRLVRLQREGKGAMDAATFLNG 301
>gi|108761879|ref|YP_629656.1| methionyl-tRNA formyltransferase [Myxococcus xanthus DK 1622]
gi|123374766|sp|Q1DCG7.1|FMT_MYXXD RecName: Full=Methionyl-tRNA formyltransferase
gi|108465759|gb|ABF90944.1| methionyl-tRNA formyltransferase [Myxococcus xanthus DK 1622]
Length = 312
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 93 MGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAV 152
M I P++TS +L KL L ++ + + Y +L PQ + G AP+I+K++
Sbjct: 155 MAIAPDETSASLYPKLAALGGEVLREFLPA--YLSGELKPVPQPSEGMVLAPIIEKDQGR 212
Query: 153 LDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVN 212
LD++ A + R++ AF P+PGA T K LK+ +A A + PGT+L +
Sbjct: 213 LDFTKPAVELERRLRAFTPWPGAFTTL-----GGKLLKVHRAQARG--GSGAPGTVL-AS 264
Query: 213 FHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+GI V CG+ + LL+LQ K+ + A +F+ G
Sbjct: 265 GPDGIEVACGEGSLVLLDLQPEGKRVMRAADFLQG 299
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
+I+F GT A + L + ++V ++T+PD GRG + PVK+ AL + ++Q
Sbjct: 5 RIVFMGTPEFAVSSLAACFEL-GDVVAVVTQPDKPKGRGNTVTAPPVKELALSRGVPVLQ 63
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
P L + A E L + D+ +V ILP+D
Sbjct: 64 PTKL----RTPPFAEE----LRQYAPDVCVVTAYGRILPKD 96
>gi|213859536|ref|ZP_03385240.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|375003268|ref|ZP_09727607.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|418865699|ref|ZP_13420172.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|353074183|gb|EHB39944.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|392827296|gb|EJA83006.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
Length = 268
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 112 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-TPEAQNEALVTHAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + + +K+W+A + + PGTIL
Sbjct: 170 WSLSAAQLERCIRAFNPWP------MSWLEIDGQPVKVWQASVIEDATQSLPGTILAAT- 222
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 223 KQGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 262
>gi|238913878|ref|ZP_04657715.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI V GK ++ LL LQ KK +SA + +N
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN 302
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|254479561|ref|ZP_05092876.1| methionyl-tRNA formyltransferase [Carboxydibrachium pacificum DSM
12653]
gi|214034499|gb|EEB75258.1| methionyl-tRNA formyltransferase [Carboxydibrachium pacificum DSM
12653]
Length = 280
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+D + TL +KL L ++ +T+KK++ KL + Q + +YAP+I K +DW
Sbjct: 130 DDDAQTLHDKLANLGAEVLSETLKKLKE--GKLIPEKQKDEEATYAPIITKEMGHIDWKS 187
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A I I P+PG T+Y K LKIWKA + + PG++L + +
Sbjct: 188 PACRIRNLIRGLKPWPGCYTFYDG-----KMLKIWKAEVVEHFGNEPPGSVLKSK--DEL 240
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CG+N +++LE+Q+ +K+ E++ G
Sbjct: 241 IVKCGENALRILEIQQEGSRKMGIREYLIG 270
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 30 LTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKY 71
+T+PD GRGMK++FSPVK+ AL+ +K++QP S+K N ++
Sbjct: 1 MTQPDKQRGRGMKVSFSPVKELALQKGVKVLQPESVKNNPEF 42
>gi|20807949|ref|NP_623120.1| methionyl-tRNA formyltransferase [Thermoanaerobacter tengcongensis
MB4]
gi|23821557|sp|Q8R9T1.1|FMT_THETN RecName: Full=Methionyl-tRNA formyltransferase
gi|20516519|gb|AAM24724.1| Methionyl-tRNA formyltransferase [Thermoanaerobacter tengcongensis
MB4]
Length = 309
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+D + TL +KL L ++ +T+KK++ KL + Q + +YAP+I K +DW
Sbjct: 159 DDDAQTLHDKLANLGAEVLSETLKKLKE--GKLIPEKQKDEEATYAPIITKEMGHIDWKS 216
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A I I P+PG T+Y K LKIWKA + + PG++L + +
Sbjct: 217 PACRIRNLIRGLKPWPGCYTFY-----DGKMLKIWKAEVVEHFGNEPPGSVLKSK--DEL 269
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
+V CG+N +++LE+Q+ +K+ E++ G
Sbjct: 270 IVKCGENALRILEIQQEGSRKMGIREYLIG 299
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 49/71 (69%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A L L+ ++++ ++T+PD GRGMK++FSPVK+ AL+ +K++
Sbjct: 1 MRIVFMGTPEFAVPSLKRLFEEGYDVLAVVTQPDKQRGRGMKVSFSPVKELALQKGVKVL 60
Query: 61 QPISLKLNGKY 71
QP S+K N ++
Sbjct: 61 QPESVKNNPEF 71
>gi|417390027|ref|ZP_12153635.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353620011|gb|EHC70247.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
Length = 174
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 18 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-TPEAQNEALVTHAEKLSKEEARID 75
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA + R I AFNP+P +S+ + + +K+W+A + + PGTIL
Sbjct: 76 WSLSAAQLERCIRAFNPWP------MSWLEIDGQPVKVWQASVIEDATQSLPGTILAAT- 128
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 129 KQGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 168
>gi|88705379|ref|ZP_01103090.1| Methionyl-tRNA formyltransferase [Congregibacter litoralis KT71]
gi|88700469|gb|EAQ97577.1| Methionyl-tRNA formyltransferase [Congregibacter litoralis KT71]
Length = 319
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 90 MIVMGILP---EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLI 146
M+ G+ P +S L +L + L+++ + + ++ Q + YA I
Sbjct: 150 MLAKGLCPITAHTSSADLYEELATIGPSLLLEVLDDLPALLSAATV--QEDDEACYAAKI 207
Query: 147 KKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPG 206
K+EA++DW+ A + R+I AFNP PG ++ + +K+W A + + ST PG
Sbjct: 208 SKDEALIDWTQPAAVVARRIRAFNPAPGCYSFL-----DGQRVKVWAAQSATSPSTVPPG 262
Query: 207 TILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
TIL + H GI V CG + L LQ K + A + + G
Sbjct: 263 TILKSSEH-GIAVRCGDGAVILERLQMAGSKAMDARDLLRG 302
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+++ FAGT AA LD L +S H++ +LT+PD +GRG K SPVK A H + ++
Sbjct: 4 LRLAFAGTPDFAARHLDALIHSPHDLQAVLTQPDRPAGRGKKDRASPVKVLAETHDLPLL 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E + ++ D +IV+ ILP+
Sbjct: 64 QPASLR--------DPEAVAEIQELNLDALIVVAYGLILPQ 96
>gi|453066262|gb|EMF07211.1| methionyl-tRNA formyltransferase [Serratia marcescens VGH107]
Length = 314
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DTS +L KL +L ++ T++++ + ++ + +YA + K EA LDW+LS
Sbjct: 163 DTSASLYGKLAQLGPQGMLTTLRQMADGSATREVQDEALV--TYAEKLSKEEARLDWNLS 220
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQN-KKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R I AFNP+P ISY + +K+W+A L+ + +PGT+++ + H GI
Sbjct: 221 AAQLERCIRAFNPWP------ISYFTIDDQPVKVWQASVLAQSANAEPGTVVHADKH-GI 273
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V ++ L++LQ KK +SA + +N
Sbjct: 274 QVATADGILNLIQLQPAGKKPMSAQDLLN 302
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +SEH IV + T+PD +GRG KL SPVK A +H + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSEHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHQLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E +L+ + D+M+V+ ILP+
Sbjct: 65 QPKSLR--------PEENQRLVADLNADVMVVVAYGLILPQ 97
>gi|407784411|ref|ZP_11131560.1| methionyl-tRNA formyltransferase [Celeribacter baekdonensis B30]
gi|407204113|gb|EKE74094.1| methionyl-tRNA formyltransferase [Celeribacter baekdonensis B30]
Length = 301
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 18/151 (11%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT+ +L ++L K+ I++ + + D+T + PQ G +YA I K+EA +DW+
Sbjct: 158 EDTTASLHDRLSKMGAAAIVEALSTL-ADLTAV---PQPEEGVTYAKKIDKSEAKIDWTR 213
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKK-KFLKIWKAHALSIESTKKPGTILNVNFHNG 216
SA I R+I +PFPGA + YQ ++ KFL + ++ +PG ++
Sbjct: 214 SATEIDRQIRGLSPFPGA---WADYQGERIKFLS-----SRLVDGAGQPGEVMGT----- 260
Query: 217 ILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ CG +++L Q+ K+ ++ +E + G
Sbjct: 261 FTIACGDGSVEILTAQREGKRAMAVSEILKG 291
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF G+ + +L+ L ++ H I + +P +GRG K +PV+ A + +
Sbjct: 1 MRVIFMGSPEFSVPVLEALVDAGHEIACVYCQPPRPAGRGKKDRPTPVQARAEAMGLPVR 60
Query: 61 QPISLK 66
P++ K
Sbjct: 61 HPVNFK 66
>gi|325290450|ref|YP_004266631.1| methionyl-tRNA formyltransferase [Syntrophobotulus glycolicus DSM
8271]
gi|324965851|gb|ADY56630.1| methionyl-tRNA formyltransferase [Syntrophobotulus glycolicus DSM
8271]
Length = 328
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 134/326 (41%), Gaps = 88/326 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRG------------MKLN---F 45
M+I+F GT A L+ L+ + + I + T+PD +GRG MKL F
Sbjct: 1 MRIVFMGTPDFAVPTLEILHRTGYEITGVFTQPDKPAGRGNKLKAGPVKEAAMKLGLSVF 60
Query: 46 SPVKKYA-----------------------LKHSIKIIQP-----ISLKLNGKYHKIANE 77
PV+ A L I I P + L +Y A
Sbjct: 61 QPVRIKAPEAVALLRELRPDCIVVVAFGQILSAEILHIPPFGCINVHASLLPQYRGAAPI 120
Query: 78 THKLLNKIEF---------------DIMIVMGILPE--DTSLTLQNKLEKLSKILIIDTI 120
+LN + DI++ I E D+ + ++L + L++DT+
Sbjct: 121 HRAVLNGDKMTGITTMFMDEGLDTGDILLQAEIPIEQNDSVGVVHDQLAQTGAQLLLDTL 180
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
KKI+ L PQS +YAP++ K + LDW A I +I NP+PGA T
Sbjct: 181 KKIKEKT--LRRTPQSQ-DFTYAPMLTKEDEYLDWKGEATQIHNQIRGLNPWPGACT--- 234
Query: 181 SYQNKKKFLKIWKAHALS------IESTKK-------------PGTILNVNFHNGILVVC 221
S++ +K +KIW + + E T K PGTIL + G +
Sbjct: 235 SFRGEK--VKIWSSEIVGEWRPELAEQTAKEEALKENRAEATIPGTILAMT-AKGFICST 291
Query: 222 GKNVIKLLELQKNNKKKISATEFING 247
G+ I++LE+Q K ++ A +FING
Sbjct: 292 GRGYIEILEIQPAGKTRMKARDFING 317
>gi|261856666|ref|YP_003263949.1| methionyl-tRNA formyltransferase [Halothiobacillus neapolitanus c2]
gi|261837135|gb|ACX96902.1| methionyl-tRNA formyltransferase [Halothiobacillus neapolitanus c2]
Length = 311
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+E + I P DT+ TL ++L +L ++ + I + +PQ
Sbjct: 146 DTGDMLHKVE------LAIRPTDTAATLHDRLAELGAQALMAALPGIV--AGSITPEPQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ YA + K E LDW A + R++ AF+P+P A T + K L+IW A
Sbjct: 198 DTQACYAAKLNKAEGRLDWREPADLLARRVRAFDPWPVAYTEF-----KSAPLRIWSAEV 252
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEF 244
+PGT++ V+ +G +V +++L Q+ K+ISA +F
Sbjct: 253 EPSSPQAQPGTVVTVD-ASGFVVSTVAGGLRVLACQQAGGKRISAADF 299
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
++II+AGT A L L + +V + T+PD SGRG KL SPVK+ AL I +
Sbjct: 3 VRIIYAGTPFFAVPALQALAADDSVELVAVYTQPDRPSGRGQKLTPSPVKEAALALGIPV 62
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL 96
QP++L+ +A L+ + +++ + +L
Sbjct: 63 EQPLTLRDESAQTALAGYRPDLMVVAAYGLILPVPVL 99
>gi|197117032|ref|YP_002137459.1| methionyl-tRNA formyltransferase [Geobacter bemidjiensis Bem]
gi|229487495|sp|B5ED77.1|FMT_GEOBB RecName: Full=Methionyl-tRNA formyltransferase
gi|197086392|gb|ACH37663.1| methionyl-tRNA formyltransferase [Geobacter bemidjiensis Bem]
Length = 318
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
EDT +L +++ +L L+ +T+ ++ +L + Q + YAP++KK + ++DWS
Sbjct: 162 EDTQ-SLHDRMSQLGAELLAETLDRLAR--GELVPEKQDDALTCYAPMMKKEDGLIDWSR 218
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A+ I ++ P+PGA ++ K LK+++ S + PG IL+ +GI
Sbjct: 219 DAQAIKNQVRGMTPWPGAYSFL-----DDKLLKVFRVQTAS--GSGAPGEILSCG-RDGI 270
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
V CG + + ELQ KK++ A +F+ G
Sbjct: 271 EVACGTGSLVIAELQLEGKKRLPAGDFLAG 300
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+I+F GT A L TL +V ++T+PD GRG + PVK A +H I ++
Sbjct: 4 MRIVFMGTPEFACPTLRTLIERGEKVVAVVTQPDRPKGRGQQTLPPPVKVVAEQHGIPVL 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEF 87
QP+ ++L +I L+ I F
Sbjct: 64 QPVKVRLPESIEEIRGLNPDLIVVIAF 90
>gi|387898152|ref|YP_006328448.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens Y2]
gi|387172262|gb|AFJ61723.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens Y2]
Length = 311
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 69/307 (22%)
Query: 7 GTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLK 66
GT + +L TL + +V ++T+PD GR + PVK A +H I ++QP ++
Sbjct: 2 GTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIPVLQPEKVR 61
Query: 67 LNGKYHKIANETHKLLNKIEFD---------------IMIVMGILPE------------- 98
L + K+ + L+ F I + +LPE
Sbjct: 62 LEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIHYSILQ 121
Query: 99 ---DTSLTLQNKLEKLSKILIIDTIKKIEYDMT---------------KLF--------- 131
T +T+ +EKL +I I ++E D T KL
Sbjct: 122 GKKKTGVTIMYMVEKLDAGDMISKI-EVEIDETDNVGTLHDKLSIAGAKLLSETVPNVIS 180
Query: 132 --FKP--QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKK 187
KP Q +YAP IK+ + +DW+ + I +I NP+P A T +
Sbjct: 181 GNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYTTL-----NGQ 235
Query: 188 FLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLL-ELQKNNKKKISATEFIN 246
+K+W + ++ ++ PGT++ NGI+V G + L+ ELQ KK++ +F+
Sbjct: 236 TIKVWASEKVAAKTEAAPGTVIRTE-QNGIVVASGNSTALLITELQPAGKKRMKGEDFVR 294
Query: 247 GCIKNIK 253
G KN++
Sbjct: 295 G--KNVQ 299
>gi|392988386|ref|YP_006486979.1| methionyl-tRNA formyltransferase [Enterococcus hirae ATCC 9790]
gi|392335806|gb|AFM70088.1| methionyl-tRNA formyltransferase [Enterococcus hirae ATCC 9790]
Length = 313
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 65/310 (20%)
Query: 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61
K++F GT + IL+ L + +V ++T+PD GR + +PVK+ A+KH + ++Q
Sbjct: 3 KLVFMGTPAFSVPILEGLLEEGYEVVAVVTQPDRPVGRKKIITPTPVKEAAVKHGLLVLQ 62
Query: 62 PISLKLNGKYHKIANETHKLLNKIEFDIMIVMGIL--PEDTSLTLQNKL----------- 108
P + + + KI ++ F + +L P ++ + L
Sbjct: 63 PEKISGSEEMEKIIALQPDVIITAAFGQFLPEKLLQAPVHGAINVHASLLPKYRGGAPVH 122
Query: 109 ------EKLSKILIIDTIKKIEY---------------DMTKLFFK-------------- 133
EK + + I++ IKK++ D+ +F K
Sbjct: 123 YSIINGEKETGVTIMEMIKKMDAGGIYAQESLPITKQDDVGTMFEKLSALGKQLLLKTLP 182
Query: 134 ----------PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQ 183
PQ +++P I + + +DW+ +A+ I ++ P+P A T Y Q
Sbjct: 183 DILNGNLSPRPQDESKVTFSPNITREQEAIDWNKTAEEIDNQVRGMRPWPIAFTTY--EQ 240
Query: 184 NKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKISAT 242
+ K L + AL+ ++T +PGTI+ + N + + CGK V+ + ELQ K K +
Sbjct: 241 TRWKLLNV---EALAEKTTAEPGTIIKKDKKN-LWIACGKQTVLAIKELQPAGKGKQAIN 296
Query: 243 EFINGCIKNI 252
EF+NG + +
Sbjct: 297 EFLNGSGQQV 306
>gi|153008676|ref|YP_001369891.1| methionyl-tRNA formyltransferase [Ochrobactrum anthropi ATCC 49188]
gi|166215491|sp|A6WYK8.1|FMT_OCHA4 RecName: Full=Methionyl-tRNA formyltransferase
gi|151560564|gb|ABS14062.1| methionyl-tRNA formyltransferase [Ochrobactrum anthropi ATCC 49188]
Length = 306
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+ T+ L ++L + L+I + +E + L +PQ+ G +YA I K EA +D
Sbjct: 156 ITPDMTAGELHDRLSMIGADLMIRALGALERE--SLALQPQAEEGVTYAAKIDKAEARID 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS A+ + I +PFPGA + + +K+ ++ AL E + +PGT+L+
Sbjct: 214 WSKPAQDVHNTIRGLSPFPGAWC-EMEINGAVERVKLQRS-ALG-EGSGEPGTVLD---- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+ + V CG+ ++L+ LQ++ K + A EF+ G
Sbjct: 267 DRLTVACGEGAVRLVTLQRSGGKPLPAQEFLRGA 300
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSG-RGMKLNFSPVKKYALKHSIKI 59
M+++F GT + IL + + +V T+P +G RG++L SPV + A + I +
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTKSPVHEKAEQFGIPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
P SLK E + +E D+ IV+ +LP+
Sbjct: 61 FTPKSLK--------GAEEQDVFASLEADVAIVVAYGLLLPQ 94
>gi|373464419|ref|ZP_09555958.1| methionyl-tRNA formyltransferase [Lactobacillus kisonensis F0435]
gi|371762621|gb|EHO51150.1| methionyl-tRNA formyltransferase [Lactobacillus kisonensis F0435]
Length = 308
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 63/305 (20%)
Query: 7 GTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLK 66
GT A IL L + ++++ +T+PD GR ++ +PVK+ A+K I + QP L
Sbjct: 2 GTPAFAVPILQGLVDDHYDVLAAVTQPDRPVGRKHRIQQTPVKQLAVKLKIPVFQPDKLG 61
Query: 67 LNGKYHKIANE--------------THKLLNKIEFDIMIVMG-ILPE------------- 98
+ + ++ + KLLN ++ + V G +LP+
Sbjct: 62 GSPEMQRVIDLHPDFIVTAAYGQFLPTKLLNAVKIAAVNVHGSLLPKYRGGAPVQYAIMN 121
Query: 99 ---DTSLTLQNKLEKL--SKILIIDTIKKIEYDMTKLFFKPQSNIGES------------ 141
+T ++L ++K+ IL I + D T+ F+ S +G
Sbjct: 122 GDKETGISLIYMVKKMDAGDILAQKAIPIEKTDDTESMFEKLSLVGRDVLLTTLPKIISG 181
Query: 142 -------------YAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKF 188
++P IK E LD++ SA + K+ A P PGA Y K+
Sbjct: 182 EVQPIKQAENEVVFSPTIKPGEEALDFNQSAFLVDAKVRALRPDPGA---YAILNGKRT- 237
Query: 189 LKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
KIWK ++++++ GT++ H L G V+ LLE+Q K K + T+++NG
Sbjct: 238 -KIWKTAVSDLQTSQETGTVVQRTKHQLSLAAGGGTVVTLLEVQPAGKPKQTITDYLNGS 296
Query: 249 IKNIK 253
+++K
Sbjct: 297 GQSLK 301
>gi|354595949|ref|ZP_09013966.1| Methionyl-tRNA formyltransferase [Brenneria sp. EniD312]
gi|353673884|gb|EHD19917.1| Methionyl-tRNA formyltransferase [Brenneria sp. EniD312]
Length = 315
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 91 IVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNE 150
I IL +DTS TL +KL ++ +++T+ ++ K + Q + +YA + K E
Sbjct: 155 IACPILADDTSATLYSKLAEIGPRGLLETLAQLAD--GKAAPETQDDALATYAEKLSKEE 212
Query: 151 AVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILN 210
+ LDW LSA + R + AFNP+P +Y++ ++ +K+WK+ A++ + PGTIL+
Sbjct: 213 SRLDWQLSALQLERCVRAFNPWP--VSYFVV---DEQPVKVWKSAAIASDHHALPGTILH 267
Query: 211 VNFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ NGI V V +LELQ KK + + +N
Sbjct: 268 AD-KNGIQVATSDGVFTILELQPAGKKVMKVQDLLN 302
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA L+ L +S H +V + T+PD +GRG KL SPVK A +H I +
Sbjct: 5 LRIIFAGTPDFAARHLEALLSSGHQVVGVFTQPDRPAGRGNKLTASPVKALAEQHDIPVY 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ E +++ ++ D+M+V+ ILP+
Sbjct: 65 QPKSLR--------QAEGQEMVETLQADVMVVVAYGLILPQ 97
>gi|326389545|ref|ZP_08211112.1| methionyl-tRNA formyltransferase [Thermoanaerobacter ethanolicus JW
200]
gi|325994550|gb|EGD52975.1| methionyl-tRNA formyltransferase [Thermoanaerobacter ethanolicus JW
200]
Length = 310
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
IL +D + TL +KL +L ++I+T+K +E L Q SY+P++ K +D
Sbjct: 157 ILDKDDAETLHDKLSRLGAEVLIETLKALE--QGTLIPVKQREEEASYSPILTKEMGHID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ +A+ I I P+PG T+Y K LKIWK + ++ GT+L
Sbjct: 215 WNKTAEEIRNLIRGMKPWPGCYTFY-----GDKMLKIWKGEIVEYNGNEENGTVLKSK-- 267
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
++V CGK+ +K++E+Q+ KK+ E++ G
Sbjct: 268 GDLIVKCGKDALKIVEIQQEGSKKMGIREYLIG 300
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 11/107 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+F GT A L L+ +++ ++T+PD GRGMKL+FSPVK+ AL+ ++I+
Sbjct: 2 LKIVFMGTPDFAVPSLQKLFEEGYDVAAVVTQPDKQKGRGMKLSFSPVKEVALQKGVEIL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDTSLTL 104
QP +K N ++ L +I D+++V ILPE+ LTL
Sbjct: 62 QPEKIKNNPEF-------LNRLKEINPDVIVVAAYGKILPEEV-LTL 100
>gi|240147076|ref|ZP_04745677.1| methionyl-tRNA formyltransferase [Roseburia intestinalis L1-82]
gi|257200761|gb|EEU99045.1| methionyl-tRNA formyltransferase [Roseburia intestinalis L1-82]
gi|291536617|emb|CBL09729.1| methionyl-tRNA formyltransferase [Roseburia intestinalis M50/1]
Length = 311
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P++T +L ++L ++ L + TI+ IE + PQ N ++ I K +D
Sbjct: 155 IRPDETGGSLFDRLAEVGAELCVKTIEAIENGTA--VYTPQDNSKATHTAKIHKELGSID 212
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ SAK I I NP+P A T + K LKIW+A+ L E PG I+
Sbjct: 213 WTKSAKEIECLIRGLNPWPSAYT-----RLDGKTLKIWRANVLPDEKKAAPGCIIKAE-K 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYF 255
LV G V++LLE+Q KK+++ F+NG ++ YF
Sbjct: 267 GSFLVQTGDGVLELLEVQLEGKKRMTTDAFLNGYTVEEGTYF 308
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT + L+ + + H +VL++++PD GR L ++PVK+ A+ H I++
Sbjct: 1 MRVIFMGTPDFSVGTLEEIIKAGHEVVLVVSQPDKAVGRSKALKYTPVKECAIAHGIEVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP ++ + + L DIMIV+
Sbjct: 61 QPERVR--------DSACIEYLKSFHADIMIVV 85
>gi|168823235|ref|ZP_02835235.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|409247119|ref|YP_006887819.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|205340496|gb|EDZ27260.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320087853|emb|CBY97616.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
Length = 315
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTATP-EAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAAQLERCIRAFNPWP---MSWLKIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ H +A+ + D+M+V+ ILP
Sbjct: 65 QPVSLRPQENQHLVAD--------LHADVMVVVAYGLILP 96
>gi|384214926|ref|YP_005606090.1| methionyl-tRNA formyl transferase [Bradyrhizobium japonicum USDA 6]
gi|354953823|dbj|BAL06502.1| methionyl-tRNA formyl transferase [Bradyrhizobium japonicum USDA 6]
Length = 307
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 81/149 (54%), Gaps = 15/149 (10%)
Query: 100 TSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSA 159
T++ L ++L +L L++ + + L K QS G +YA I K EA +DW+ A
Sbjct: 163 TAVDLHDRLSRLGADLMVRAMAALAR--GGLQLKKQSEDGVTYAAKIDKAEARIDWTRPA 220
Query: 160 KTIMRKINAFNPFPGAKTYYISYQNKK-KFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
+ ++R I+ +PFPGA + +N + K L+ A + + +PG +L+ + +
Sbjct: 221 RAVLRHIHGLSPFPGA---WAELENARVKILRCELA-----KGSGEPGAVLD----DQLT 268
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
+ CG+ I+++ELQ+ K ++ A +F+ G
Sbjct: 269 IACGEEAIRIVELQREGKGRMQAADFLRG 297
>gi|387769758|ref|ZP_10125958.1| methionyl-tRNA formyltransferase [Pasteurella bettyae CCUG 2042]
gi|386906147|gb|EIJ70891.1| methionyl-tRNA formyltransferase [Pasteurella bettyae CCUG 2042]
Length = 318
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI ++TS +L NKL +L+ +I+ + +E K + Q
Sbjct: 146 DTGDMLHKVYCDIS------KDETSTSLYNKLAELAPNALINVLDGLE--TGKFPAEKQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
+ +YA + K EA LDW+LSA+ + R I AFNP+P + Q + LK+++A
Sbjct: 198 DAQSNYADKLSKEEAKLDWNLSAEQLERCIRAFNPWPMSYFSTTDAQGHSQTLKVYQASI 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L K GTIL + GI + + V+ LL+LQ KK +S + +NG
Sbjct: 258 LP-HVEKPAGTILQAD-KKGIQITTAEGVLNLLQLQPAGKKPMSVQDLLNG 306
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KIIFAGT AA L L +S H ++ + T+ D +GRG KL S VK+ A ++ I +
Sbjct: 4 LKIIFAGTPDFAARHLQALLDSHHEVIAVYTQSDKPAGRGKKLQASAVKQLAEQYHIAVY 63
Query: 61 QPISLK 66
QP SL+
Sbjct: 64 QPKSLR 69
>gi|404318474|ref|ZP_10966407.1| methionyl-tRNA formyltransferase [Ochrobactrum anthropi CTS-325]
Length = 306
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+ T+ L ++L + L+I + +E + L +PQ+ G +YA I K EA +D
Sbjct: 156 ITPDMTAGELHDRLSMIGADLMIRALGALERE--SLALQPQAEEGVTYAAKIDKAEARID 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS A+ + I +PFPGA + + +K+ ++ AL E + +PGT+L+
Sbjct: 214 WSKPAQDVHNTIRGLSPFPGAWC-EMEINGAVERVKLQRS-ALG-EGSGEPGTVLD---- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGC 248
+ + V CG+ ++L+ LQ++ K + A EF+ G
Sbjct: 267 DRLTVACGERAVRLVTLQRSGGKPLPAQEFLRGA 300
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSG-RGMKLNFSPVKKYALKHSIKI 59
M+++F GT + IL + + +V T+P +G RG++L SPV + A + I +
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTKSPVHEKAEQFGIPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
P SLK E + +E D+ IV+ +LP+
Sbjct: 61 FTPKSLK--------GVEEQDVFASLEADVAIVVAYGLLLPQ 94
>gi|374850910|dbj|BAL53886.1| hypothetical conserved protein [uncultured Acidobacteria bacterium]
gi|374851662|dbj|BAL54615.1| hypothetical conserved protein [uncultured Acidobacteria bacterium]
Length = 324
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P++T+ L +L +L L+++T+ ++ ++ +PQ S+APL+++ +D
Sbjct: 156 IGPDETAPELTERLARLGAELLLETLAGLQAG--RIEPRPQDETQASHAPLLRREHGWVD 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKK-----PGTIL 209
W LSA I +I F P+PGA T + L +W+A A +E ++ PGTI
Sbjct: 214 WRLSAVEIRNRIRGFQPWPGAWTLLGGAR-----LILWRAEA-EVERFEEDAHVAPGTIC 267
Query: 210 NVNFHNGILVVC-GKNVIKLLELQKNNKKKISATEFINGC 248
+ + +VVC G + +++ E+Q ++++ EF+ G
Sbjct: 268 AIE-RDAFVVVCGGPSRLRITEVQLEGRRRLPTREFLKGA 306
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M++IF GT +A L L ++ H+++ + T+PD GR L PVK A I +
Sbjct: 1 MRVIFMGTPEAAVPTLLGLLDAGHDVLAVFTQPDRPVGRHQVLTPPPVKGVAQAKGIPVY 60
Query: 61 QPISLKLNGKYHKIANE 77
QP L+ N + E
Sbjct: 61 QPEKLRTNESVRALIQE 77
>gi|288941788|ref|YP_003444028.1| methionyl-tRNA formyltransferase [Allochromatium vinosum DSM 180]
gi|288897160|gb|ADC62996.1| methionyl-tRNA formyltransferase [Allochromatium vinosum DSM 180]
Length = 315
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P +T TL ++L +L ++D + I Q + +YA + K+EA +D
Sbjct: 159 IDPRETGGTLHDRLAELGARALVDALPGIAE--GSRAPDAQDDALATYAHKLSKDEATID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIES---TKKPGTILNV 211
WS A I R++ AF+P+P A+T + L+IW A A S ++ + PGT++
Sbjct: 217 WSAPADAIERQVRAFDPWPVAQTTL-----EGATLRIWSAEAESEDAAGDSAAPGTVIGA 271
Query: 212 NFHNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
+ GI V G + + LQ KK +SA +++N
Sbjct: 272 D-RTGIRVATGAGRLCVTRLQPAGKKPMSAADYLN 305
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++++FAGT A L L ++ H ++ + T+PD +GRG KL SPVK AL + +
Sbjct: 4 LRLLFAGTPDFAVPCLAALLDAGHEVIGVYTQPDRPAGRGRKLQMSPVKALALDRGLAVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
QP SLK + E + L + D+M+V+
Sbjct: 64 QPESLKRD-------PEAVEQLRALGADLMVVV 89
>gi|291541041|emb|CBL14152.1| methionyl-tRNA formyltransferase [Roseburia intestinalis XB6B4]
Length = 306
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P++T +L ++L ++ L + TI+ IE + PQ N ++ I K +D
Sbjct: 150 IRPDETGGSLFDRLAEVGAELCVKTIEAIENGTA--VYTPQDNSKATHTAKIHKELGSID 207
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ SAK I I NP+P A T + K LKIW+A+ L E PG I+
Sbjct: 208 WTKSAKEIECLIRGLNPWPSAYT-----RLDGKTLKIWRANVLPDEKKAAPGCIIKAE-K 261
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING-CIKNIKYF 255
LV G V++LLE+Q KK+++ F+NG ++ YF
Sbjct: 262 GSFLVQTGDGVLELLEVQLEGKKRMTTDAFLNGYTVEEGTYF 303
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 7 GTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLK 66
GT + L+ + + H +VL++++PD GR L ++PVK+ A+ H I++ QP ++
Sbjct: 2 GTPDFSVGTLEEIIKAGHEVVLVVSQPDKAVGRSKALKYTPVKECAIAHGIEVYQPERVR 61
Query: 67 LNGKYHKIANETHKLLNKIEFDIMIVM 93
+ + L DIMIV+
Sbjct: 62 --------DSACIEYLKSFHADIMIVV 80
>gi|444354433|ref|YP_007390577.1| Methionyl-tRNA formyltransferase (EC 2.1.2.9) [Enterobacter
aerogenes EA1509E]
gi|443905263|emb|CCG33037.1| Methionyl-tRNA formyltransferase (EC 2.1.2.9) [Enterobacter
aerogenes EA1509E]
Length = 315
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L +KL L ++ T+ ++ + + +S + SYA + K EA +D
Sbjct: 159 ITAEDTSGSLYDKLANLGPEGLLATLAQLADGSAEPEVQDESRV--SYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA+ + R I AFNP+P +S+ + ++ +K+W+A ++ + +PGTI+
Sbjct: 217 WSLSAEQLERCIRAFNPWP------MSWLEIDEQPVKVWRASVITESANAEPGTIVAAT- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V G ++ L LQ KK +SA + +N ++FI
Sbjct: 270 KQGIQVATGNGILNLESLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +SEH +V + T+PD +GRG KL SPVK A ++I +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSEHQVVGVFTQPDRPAGRGKKLMPSPVKVLAEANNIPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPSSLR--------PQENQQLVADLNADVMVVVAYGLILP 96
>gi|313893395|ref|ZP_07826967.1| methionyl-tRNA formyltransferase [Veillonella sp. oral taxon 158
str. F0412]
gi|313442036|gb|EFR60456.1| methionyl-tRNA formyltransferase [Veillonella sp. oral taxon 158
str. F0412]
Length = 336
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 132/326 (40%), Gaps = 88/326 (26%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLN---------------F 45
++I+F GT + L+ L ++ H IV + +PD GRG ++ +
Sbjct: 7 LRIVFMGTPDFSVPTLEALIHAGHTIVGVYCQPDKQKGRGKQVQMPPVKVAALKHNLPVY 66
Query: 46 SPV---------KKYALKHSI-------KIIQPISLKLN------------GKYHKIANE 77
PV + AL+ + KI+ P ++L KY A
Sbjct: 67 QPVTLRDEQVQAELEALRPDVVVVIAYGKILPPWLIRLPQYGCINVHASVLPKYRGAAPI 126
Query: 78 THKLLN---KIEFDIM--------------IVMGILPEDTSLTLQNKLEKLSKILIIDTI 120
+ +LN K IM + ILP +T+ L ++ L I+ +
Sbjct: 127 HYAILNGDTKTGVTIMHMDDGLDTGDIIDIVETDILPGETTGQLFERIAVLGGETIVPVL 186
Query: 121 KKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYI 180
+ + ++ PQ + ++ I K +DWS A I+ I NP PG TY
Sbjct: 187 TR--WVNGEIVATPQDDTMATHTAKITKEMGQIDWSKPANEIVNLIRGLNPAPGCYTYL- 243
Query: 181 SYQNKKKFLKIWKA--------HAL----------SIESTKKPGTILNVNFHNGILVVCG 222
K LKIW H L +I +T PGTI V+ +G+ V CG
Sbjct: 244 ----DGKRLKIWSGEVVPSDTTHCLIDIRGKHVPIAISATTVPGTI--VSKIDGLGVFCG 297
Query: 223 K-NVIKLLELQKNNKKKISATEFING 247
N+I L E+Q NKK+ISAT+FING
Sbjct: 298 DGNIILLTEVQPENKKRISATDFING 323
>gi|421276665|ref|ZP_15727486.1| methionyl-tRNA formyltransferase [Streptococcus mitis SPAR10]
gi|395876871|gb|EJG87943.1| methionyl-tRNA formyltransferase [Streptococcus mitis SPAR10]
Length = 311
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 131/311 (42%), Gaps = 70/311 (22%)
Query: 2 KIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
K+IF GT +A +L L + E + IV ++T+PD GR + +PVK+ A + + I
Sbjct: 3 KLIFMGTPNFSATVLKGLLSDERYEIVAVVTQPDRAVGRKKVIQETPVKQAAKEAGLPIY 62
Query: 61 QPISLKLNGKYHKIANE--------------THKLLNKIEFDIMIVMGILP--------- 97
QP L + + I N KLL+ ++F + + +LP
Sbjct: 63 QPEKLSGSPEMEAIMNLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGGAPIH 122
Query: 98 ------------------------------------EDTSLTLQNKLEKLSKILIIDTIK 121
ED TL KL + + L++DT+
Sbjct: 123 YALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLLDTLP 182
Query: 122 KIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
Y ++ +PQ +++P IK E LDW+ + + + +I NP+P A T+
Sbjct: 183 A--YIAGEIQPQPQDPSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL-- 238
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISA 241
K + KI++ AL +E PG IL++ ++V + + L ++Q K K+
Sbjct: 239 ---KGERFKIYE--ALPVEGQGNPGEILSIGKKE-LIVATAEGALSLKQVQPAGKPKMDI 292
Query: 242 TEFINGCIKNI 252
F+NG +++
Sbjct: 293 ASFLNGVGRSL 303
>gi|336247454|ref|YP_004591164.1| methionyl-tRNA formyltransferase [Enterobacter aerogenes KCTC 2190]
gi|334733510|gb|AEG95885.1| methionyl-tRNA formyltransferase [Enterobacter aerogenes KCTC 2190]
Length = 315
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L +KL L ++ T+ ++ + + +S + SYA + K EA +D
Sbjct: 159 ITAEDTSGSLYDKLANLGPEGLLATLAQLADGSAEPEVQDESRV--SYAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WSLSA+ + R I AFNP+P +S+ + ++ +K+W+A ++ + +PGTI+
Sbjct: 217 WSLSAEQLERCIRAFNPWP------MSWLEIDEQPVKVWRASVITESANAEPGTIVAAT- 269
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V G ++ L LQ KK +SA + +N ++FI
Sbjct: 270 KQGIQVATGNGILNLESLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L +SEH +V + T+PD +GRG KL SPVK A +++ +
Sbjct: 5 LRIIFAGTPDFAARHLDALLSSEHQVVGVFTQPDRPAGRGKKLMPSPVKVLAEANNLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPSSLR--------PQENQQLVADLNADVMVVVAYGLILP 96
>gi|330831511|ref|YP_004394463.1| methionyl-tRNA formyltransferase [Aeromonas veronii B565]
gi|423211838|ref|ZP_17198371.1| methionyl-tRNA formyltransferase [Aeromonas veronii AER397]
gi|328806647|gb|AEB51846.1| Methionyl-tRNA formyltransferase [Aeromonas veronii B565]
gi|404612639|gb|EKB09697.1| methionyl-tRNA formyltransferase [Aeromonas veronii AER397]
Length = 314
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I ++TS +L +KL +L ++DTI + T + Q + +YA + K EA +D
Sbjct: 158 IAADETSASLYDKLAELGPQALVDTINAMAAGETA--AEAQDDTLANYAEKLSKEEARID 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WS+ A I R I +FNP+P IS+ + + +K+W+A + + + GT+L +
Sbjct: 216 WSMDAVAIERCIRSFNPWP------ISWFEVADQTVKVWQAAVIDSDHGQPAGTLLKAD- 268
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI + GK V++LL LQ KK +S ++ +N
Sbjct: 269 KQGIDIATGKGVLRLLTLQPPGKKAMSVSDLLN 301
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L +S+H +V + T+PD +GRG KL SPVK+ AL H++ +
Sbjct: 4 LKLIFAGTPDFAARHLAALLSSDHEVVAVYTQPDKPAGRGQKLTASPVKELALAHNLPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPASLR--------KEEAQAELAALGADLMVVVAYGLILP 95
>gi|427736042|ref|YP_007055586.1| methionyl-tRNA formyltransferase [Rivularia sp. PCC 7116]
gi|427371083|gb|AFY55039.1| methionyl-tRNA formyltransferase [Rivularia sp. PCC 7116]
Length = 332
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 133/330 (40%), Gaps = 92/330 (27%)
Query: 1 MKIIFAGTSISAAAILDTLYN-SEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
MK+IF GT A L+ L N E ++ ++T+PD GRG K+ SPVK AL H++ +
Sbjct: 1 MKVIFFGTPQFAVPTLEKLLNHPEFEVLAVVTQPDKVRGRGKKVTPSPVKSVALMHNLPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------IL 96
QP +K + T K L +I D +V+ IL
Sbjct: 61 WQPQRIKKD-------EATLKQLKEINADAFVVIAYGQILSQEILDMPRIACVNVHGSIL 113
Query: 97 PE-----------------------------DTSLTL-------------QNKLEKLSKI 114
PE DT L Q+ EKL+ I
Sbjct: 114 PEYRGAAPIQWCLHNGEEETGITTMMMDAGMDTGAMLLKATTPIGLLDNSQDLAEKLASI 173
Query: 115 ---LIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171
L+++T+ K++ + + PQ N +YAPLIKK + LDWS SA + KI F P
Sbjct: 174 GADLLVETLIKLQNEEIEPI--PQDNSQATYAPLIKKEDYRLDWSKSAIQLHNKIRGFYP 231
Query: 172 FPGAK--------------TYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A T SYQ K +I + KPG ++++ G
Sbjct: 232 NCVATFRDRPIKIIGTVPLTADNSYQLPKLLQEIETKLPELSNLSGKPGEVVSIVKGIGA 291
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
++ GK ++ L E+Q K+ S +F+NG
Sbjct: 292 IIQTGKGLLLLQEVQLAGKRPQSGWDFVNG 321
>gi|374857390|dbj|BAL60243.1| methionyl-tRNA formyltransferase [uncultured candidate division OP1
bacterium]
Length = 304
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLS 158
DT+ TL +KL L L++ T++ +E L PQ + ++AP I + +DW+
Sbjct: 156 DTAGTLHDKLAALGPDLVLRTLEGLEKG--ALAPIPQDHSQATFAPKITNSLGQIDWAQP 213
Query: 159 AKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
A+ I I NP PGA T++ + LKI+ + + S PG +++ +L
Sbjct: 214 ARKIFNLIRGLNPQPGAYTFWAGIR-----LKIYASRVVPSTSILPPGCVIDPER---LL 265
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
V CG++ ++L+E+Q K+++S +F+NG
Sbjct: 266 VRCGEDALELIEVQPAGKRRMSGRDFVNG 294
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M +IF GT+ L L +H+++ + T+PD +GRG+ P+K+ AL+ + +
Sbjct: 1 MNVIFVGTASLGIPTLRALAQ-KHSVLAVFTQPDRPAGRGLVPMPPPIKQTALELGLPVY 59
Query: 61 QP 62
QP
Sbjct: 60 QP 61
>gi|226942062|ref|YP_002797136.1| Fmt [Laribacter hongkongensis HLHK9]
gi|226716989|gb|ACO76127.1| Fmt [Laribacter hongkongensis HLHK9]
Length = 266
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 98 EDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
+DT+ +L ++L L I+D + D +P++ + +YA + K EA LDW+L
Sbjct: 119 DDTAASLHDRLMALGASAIVDVLAT--PDRYPPVIQPEAGV--TYAQKLSKEEAGLDWNL 174
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ + P PGA T + LK+W A + + PG ++ + H G+
Sbjct: 175 PAAELDRRVRGYCPVPGAWTRL-----GGETLKVWA--ATPVAGSGMPGMVIAADRH-GL 226
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFING 247
V CG+ + + LQ K++ A+ F+ G
Sbjct: 227 TVACGEGALCITSLQPAGGKRLEASAFVAG 256
>gi|444347193|ref|ZP_21155138.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|443540761|gb|ELT51288.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
Length = 769
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136
+T +L+K+ DI + ++TS L KL +++ +++ + + D T + Q
Sbjct: 146 DTGDMLHKVYCDITL------QETSAGLYAKLAEIAPAALVEVLDHLT-DGT-FTAERQD 197
Query: 137 NIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHA 196
SYA + K EA L+W LSA + R I AFNP+P A + LK+++A
Sbjct: 198 AAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELTDGAGNPQTLKVYQATV 257
Query: 197 LSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
L + K PGTIL+ + H GI + V+ LL+LQ + KK +SA + +NG
Sbjct: 258 LP-HTNKAPGTILSADKH-GIQIATVDGVLNLLQLQPSGKKPMSAQDLLNG 306
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+ IIFAGT AA L L NS HN++ + T+PD +GRG KL SPVK+ A +H I +
Sbjct: 4 LNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAGRGKKLQSSPVKQLAEQHQIPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPE 98
QP SL+ ET L ++ D+M+V+ ILP+
Sbjct: 64 QPKSLR--------KAETQAELTALQADVMVVVAYGLILPQ 96
>gi|207858649|ref|YP_002245300.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|378957744|ref|YP_005215231.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|421356756|ref|ZP_15807075.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421365473|ref|ZP_15815694.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421365562|ref|ZP_15815779.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421374527|ref|ZP_15824657.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421374609|ref|ZP_15824736.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421383203|ref|ZP_15833243.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421387342|ref|ZP_15837344.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421388562|ref|ZP_15838551.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421392759|ref|ZP_15842709.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421400249|ref|ZP_15850138.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403430|ref|ZP_15853278.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421408080|ref|ZP_15857883.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412277|ref|ZP_15862035.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421418308|ref|ZP_15868012.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421419692|ref|ZP_15869380.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421428045|ref|ZP_15877661.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421432546|ref|ZP_15882116.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421437140|ref|ZP_15886663.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441583|ref|ZP_15891050.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421445489|ref|ZP_15894914.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421450097|ref|ZP_15899475.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|436592461|ref|ZP_20512219.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436793003|ref|ZP_20521623.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436796410|ref|ZP_20522835.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436810103|ref|ZP_20529320.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812096|ref|ZP_20530753.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436846463|ref|ZP_20539300.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436848344|ref|ZP_20540051.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436854764|ref|ZP_20544228.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436861648|ref|ZP_20548663.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436874393|ref|ZP_20556946.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436883848|ref|ZP_20562092.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436890478|ref|ZP_20565807.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436892217|ref|ZP_20566645.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436903381|ref|ZP_20573803.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436907862|ref|ZP_20575618.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436921645|ref|ZP_20583916.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436929884|ref|ZP_20588453.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436931788|ref|ZP_20589229.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436939624|ref|ZP_20593904.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436949830|ref|ZP_20599604.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436965071|ref|ZP_20606466.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436975469|ref|ZP_20611606.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436984154|ref|ZP_20614367.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436988812|ref|ZP_20616321.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437011585|ref|ZP_20624553.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437019117|ref|ZP_20626988.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437034168|ref|ZP_20632908.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437046799|ref|ZP_20638592.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437052919|ref|ZP_20642200.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437055214|ref|ZP_20643420.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437062839|ref|ZP_20647727.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437077274|ref|ZP_20655430.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437085886|ref|ZP_20660310.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437096195|ref|ZP_20664813.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437102112|ref|ZP_20666429.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437121913|ref|ZP_20671999.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437130191|ref|ZP_20676485.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437138298|ref|ZP_20680908.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437147453|ref|ZP_20686843.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437156076|ref|ZP_20692034.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437160447|ref|ZP_20694632.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437164665|ref|ZP_20697247.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437179348|ref|ZP_20705327.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437180965|ref|ZP_20706284.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437263675|ref|ZP_20719621.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437268879|ref|ZP_20722193.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437289695|ref|ZP_20731128.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437305336|ref|ZP_20734211.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437324950|ref|ZP_20739969.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437343419|ref|ZP_20745783.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437412486|ref|ZP_20753376.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437442481|ref|ZP_20757867.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437462135|ref|ZP_20762528.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437471822|ref|ZP_20765327.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437496226|ref|ZP_20773166.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437501621|ref|ZP_20774377.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437544069|ref|ZP_20782787.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437560369|ref|ZP_20786014.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437574284|ref|ZP_20789689.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437585628|ref|ZP_20792985.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437599167|ref|ZP_20796814.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437618308|ref|ZP_20803109.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437635201|ref|ZP_20807097.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437664881|ref|ZP_20814456.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437686062|ref|ZP_20819276.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437700769|ref|ZP_20823941.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437717809|ref|ZP_20828407.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437737174|ref|ZP_20832906.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437796277|ref|ZP_20837579.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437803236|ref|ZP_20838525.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|438044396|ref|ZP_20855945.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438094310|ref|ZP_20861645.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438104926|ref|ZP_20866081.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438113845|ref|ZP_20869784.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438140300|ref|ZP_20874902.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445174211|ref|ZP_21396996.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445181042|ref|ZP_21398226.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445232940|ref|ZP_21406219.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445250377|ref|ZP_21408808.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445336418|ref|ZP_21415709.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445348656|ref|ZP_21419685.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445364222|ref|ZP_21424886.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|238690439|sp|B5R1E4.1|FMT_SALEP RecName: Full=Methionyl-tRNA formyltransferase
gi|206710452|emb|CAR34810.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|357208355|gb|AET56401.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|395980540|gb|EJH89764.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395993170|gb|EJI02270.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395993264|gb|EJI02360.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395994045|gb|EJI03127.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|395995963|gb|EJI05020.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396007729|gb|EJI16673.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396009568|gb|EJI18493.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396020061|gb|EJI28910.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396020081|gb|EJI28929.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396024171|gb|EJI32959.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396028929|gb|EJI37681.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396028992|gb|EJI37742.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396038532|gb|EJI47168.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396043169|gb|EJI51782.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396048000|gb|EJI56566.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396049540|gb|EJI58079.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396050075|gb|EJI58608.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396050752|gb|EJI59273.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396063457|gb|EJI71849.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396065082|gb|EJI73461.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396067916|gb|EJI76269.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|434939887|gb|ELL46623.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434955825|gb|ELL49624.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|434961542|gb|ELL54823.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434965788|gb|ELL58706.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434976583|gb|ELL68807.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434977774|gb|ELL69866.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434978406|gb|ELL70440.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434990715|gb|ELL82252.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434993781|gb|ELL85179.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434997007|gb|ELL88289.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435000436|gb|ELL91583.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435001207|gb|ELL92327.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435006516|gb|ELL97404.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435018780|gb|ELM09237.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435021393|gb|ELM11767.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435025054|gb|ELM15235.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435030727|gb|ELM20734.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435032913|gb|ELM22831.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435044615|gb|ELM34291.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435047402|gb|ELM36990.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435047463|gb|ELM37045.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435049700|gb|ELM39216.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435053029|gb|ELM42502.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435064360|gb|ELM53493.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435064696|gb|ELM53817.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435071969|gb|ELM60903.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435076253|gb|ELM65039.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435077205|gb|ELM65963.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435080592|gb|ELM69268.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435089817|gb|ELM78231.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435098985|gb|ELM87209.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435103563|gb|ELM91643.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435103615|gb|ELM91692.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435104140|gb|ELM92211.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435108146|gb|ELM96114.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435123137|gb|ELN10634.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435124381|gb|ELN11840.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435125889|gb|ELN13316.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435133295|gb|ELN20463.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435133888|gb|ELN21034.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435137333|gb|ELN24399.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435147261|gb|ELN34034.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435151135|gb|ELN37789.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435154763|gb|ELN41327.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435160588|gb|ELN46857.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435166962|gb|ELN52909.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435173463|gb|ELN58972.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435182284|gb|ELN67310.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435187391|gb|ELN72158.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435192146|gb|ELN76697.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435193201|gb|ELN77683.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435203298|gb|ELN87059.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435211440|gb|ELN94554.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435219626|gb|ELO01971.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435226174|gb|ELO07759.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435226747|gb|ELO08303.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435234478|gb|ELO15335.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435238494|gb|ELO19127.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435238513|gb|ELO19145.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435245933|gb|ELO25960.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435259396|gb|ELO38621.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435261338|gb|ELO40494.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435263561|gb|ELO42606.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435265431|gb|ELO44284.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435266837|gb|ELO45565.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435273497|gb|ELO51764.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435280680|gb|ELO58375.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435284154|gb|ELO61657.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435284883|gb|ELO62301.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435290680|gb|ELO67585.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435303501|gb|ELO79375.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435314651|gb|ELO88045.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435320165|gb|ELO92831.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435321883|gb|ELO94231.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435329261|gb|ELP00707.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|444859295|gb|ELX84246.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444861824|gb|ELX86695.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444871865|gb|ELX96255.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444873962|gb|ELX98232.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444876036|gb|ELY00225.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444883294|gb|ELY07186.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|444889738|gb|ELY13141.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 315
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-APEAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAVQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLHADVMVVVAYGLILP 96
>gi|148558246|ref|YP_001257945.1| methionyl-tRNA formyltransferase [Brucella ovis ATCC 25840]
gi|166214879|sp|A5VVU0.1|FMT_BRUO2 RecName: Full=Methionyl-tRNA formyltransferase
gi|148369531|gb|ABQ62403.1| methionyl-tRNA formyltransferase [Brucella ovis ATCC 25840]
Length = 306
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P+ T+ L ++L + L+I + +E + L +PQ+ G +YA I K EA +D
Sbjct: 156 ITPDMTAGELHDRLSVIGADLMIRALGALERE--SLALQPQAEEGVTYAAKIDKAEARID 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS AK + I +PFPGA + + ++ + E + PGT+L+
Sbjct: 214 WSKPAKDVHNSIRGLSPFPGA---WCEMEINGAVERVKLQRSTLGEGSGAPGTVLD---- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ +++ CG+ ++L LQ++ K + A EF+ G
Sbjct: 267 DRLMIACGEGAVRLATLQRSGGKPLPAQEFLRG 299
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSG-RGMKLNFSPVKKYALKHSIKI 59
M+++F GT + IL + + +V T+P +G RG++L SPV + A + I +
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVM 93
P SLK E + +E D+ IV+
Sbjct: 61 FTPKSLK--------GAEEQDVFASLEADVAIVV 86
>gi|333897223|ref|YP_004471097.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112488|gb|AEF17425.1| Methionyl-tRNA formyltransferase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 313
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
IL ED + T+ +KL L ++ID I + + T + K Q + +YAP+++K+ +++
Sbjct: 156 ILEEDNAETIHDKLAILGGDVLIDAINMM-CNGTLMSLK-QDDSKATYAPMLEKSMGLIN 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A I I P+PGA TYY LKIW A +KPGTI+ +
Sbjct: 214 WEKDAIEIRNLIRGLRPWPGAYTYY-----NGSMLKIWSADVYHYSGDEKPGTIIESD-- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ +++ CGK +K++E+Q +K++ +++ G
Sbjct: 267 DTLIIKCGKEALKVIEIQGEGTRKMNVEDYLRG 299
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M I+F GT A L L HN++L +T+PD GRG KL+F PVK++A+KH I++
Sbjct: 1 MNIVFMGTPEFAVPSLKKLVEFGHNVMLAITQPDKPKGRGKKLSFPPVKEFAIKHGIEVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP+ LK N E + + +++ ++++V ILPE+
Sbjct: 61 QPLKLKNN-------EEVFEKIRRLKPELIVVAAYGKILPEE 95
>gi|345017812|ref|YP_004820165.1| methionyl-tRNA formyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033155|gb|AEM78881.1| Methionyl-tRNA formyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 310
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
IL +D + TL KL +L ++I+T+K +E L Q SY+P++ K +D
Sbjct: 157 ILDKDDAETLHYKLSRLGAEVLIETLKALE--QGTLLPVKQREEEASYSPILTKEMGHID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ +A+ I I P+PG T+Y K LKIWK + ++ GT+L
Sbjct: 215 WNKTAEEIRNLIRGMKPWPGCYTFY-----GDKMLKIWKGEIVEYNGNEENGTVLKSK-- 267
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
++V CGK+ +K++E+Q+ KK+ +E++ G
Sbjct: 268 GDLIVKCGKDALKIVEIQQEGSKKMGISEYLIG 300
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 11/107 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+KI+F GT A L L+ +++ ++T+PD GRGMKL+FSPVK+ AL+ ++I+
Sbjct: 2 LKIVFMGTPDFAVPSLQKLFEEGYDVAAVVTQPDKQKGRGMKLSFSPVKEVALQKGVEIL 61
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDTSLTL 104
QP +K N ++ L +I D+++V ILPE+ LTL
Sbjct: 62 QPEKIKNNPEF-------LNRLKEINPDVIVVAAYGKILPEEV-LTL 100
>gi|418289572|ref|ZP_12901841.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM220]
gi|372203327|gb|EHP17026.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM220]
Length = 308
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ + + L ++ ++ +++++ +L Q G +YA + K EA +D
Sbjct: 156 IRPTDTANEVHDALMEIGAAAVVADLQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I RKI AFNP P A ++ YQ K +KI +A ++ + G +L+ +
Sbjct: 215 WSESAAVIERKIRAFNPVPAA---WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG+N +K+ ELQ ++++ F G
Sbjct: 267 DGLVVACGENALKITELQPAGGRRMNIAAFAAG 299
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L SPVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELGLRVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++E D+M+V ILP++
Sbjct: 61 QPEKLRNNA-------EALQMLKEVEADVMVVAAYGLILPQE 95
>gi|254805843|ref|YP_003084064.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha14]
gi|254669385|emb|CBA08532.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha14]
Length = 308
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ + + L ++ ++ +++++ +L Q G +YA + K EA +D
Sbjct: 156 IRPTDTANEVHDALMEIGAAAVVADLQQLQSK-GRLNAVKQPEEGVTYAQKLSKEEARID 214
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I RKI AFNP P A ++ YQ K +KI +A ++ + G +L+ +
Sbjct: 215 WSESAAVIERKIRAFNPVPAA---WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSCSA- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG+N +K+ ELQ ++++ F G
Sbjct: 267 DGLVVACGENALKITELQPAGGRRMNIAAFAAG 299
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++E D+M+V ILP+D
Sbjct: 61 QPEKLRNNA-------EALQMLKEVEADVMVVAAYGLILPQD 95
>gi|423203175|ref|ZP_17189753.1| methionyl-tRNA formyltransferase [Aeromonas veronii AER39]
gi|404613404|gb|EKB10426.1| methionyl-tRNA formyltransferase [Aeromonas veronii AER39]
Length = 314
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I ++TS +L +KL +L ++DTI + T + Q + +YA + K EA +D
Sbjct: 158 IAADETSASLYDKLAELGPQALVDTINAMAAGETA--AEAQDDALANYAEKLSKEEARID 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WS+ A I R I +FNP+P IS+ + + +K+W+A + + + GT+L +
Sbjct: 216 WSMEAVAIERCIRSFNPWP------ISWFEVADQTVKVWQAAVIDSDHGQPAGTLLKAD- 268
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI + GK V++LL LQ KK +S ++ +N
Sbjct: 269 KQGIDIATGKGVLRLLTLQPPGKKAMSVSDLLN 301
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L +S+H +V + T+PD +GRG KL SPVK+ AL H++ +
Sbjct: 4 LKLIFAGTPDFAARHLAALLSSDHEVVAVYTQPDKPAGRGQKLTASPVKELALAHNLPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPASLR--------KEEAQAELAALGADLMVVVAYGLILP 95
>gi|392940844|ref|ZP_10306488.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Thermoanaerobacter siderophilus SR4]
gi|392292594|gb|EIW01038.1| LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase
[Thermoanaerobacter siderophilus SR4]
Length = 309
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
IL +D + TL +KL +L ++I+T+K +E L Q SY+P++ K +D
Sbjct: 156 ILDKDDAETLHDKLSRLGAEVLIETLKALEKGT--LIPVKQREEEASYSPILTKEMGHID 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ +A+ I I P+PG T+Y K LKIWK + ++ GT+L
Sbjct: 214 WNKTAEEIRNLIRGMKPWPGCYTFY-----GDKMLKIWKGEIVEYNGNEENGTVLKSK-- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
++V CGK+ +K++E+Q+ KK+ E++ G
Sbjct: 267 GDLIVKCGKDALKIVEIQQEGSKKMGIREYLIG 299
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 11/107 (10%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MKI+F GT A L L+ +++ ++T+PD GRGMKL+FSPVK+ AL+ ++I+
Sbjct: 1 MKIVFMGTPDFAVPSLQKLFEEGYDVAAVVTQPDKQKGRGMKLSFSPVKEVALQKGVEIL 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDTSLTL 104
QP +K N ++ L +I D+++V ILPE+ LTL
Sbjct: 61 QPEKIKNNPEF-------LNRLKEINPDVIVVAAYGKILPEEV-LTL 99
>gi|205354965|ref|YP_002228766.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|375125864|ref|ZP_09771028.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|238690544|sp|B5RH48.1|FMT_SALG2 RecName: Full=Methionyl-tRNA formyltransferase
gi|205274746|emb|CAR39802.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326630114|gb|EGE36457.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
Length = 315
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-APEAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAVQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GRG KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLHADVMVVVAYGLILP 96
>gi|187476717|ref|YP_784741.1| methionyl-tRNA formyltransferase [Bordetella avium 197N]
gi|123725123|sp|Q2L0K7.1|FMT_BORA1 RecName: Full=Methionyl-tRNA formyltransferase
gi|115421303|emb|CAJ47808.1| methionyl-tRNA formyltransferase [Bordetella avium 197N]
Length = 311
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 135 QSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKA 194
Q G +YA + K EA L SA+ + R+I AFNP PGA + + +K+W+A
Sbjct: 199 QPEQGVTYAAKLDKAEAALKLDESAELLARRIRAFNPVPGAS---LRLPGLNEPVKVWQA 255
Query: 195 HALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFING 247
AL S PGT+L + G+ + G+ V++LLELQK K+ SA F+ G
Sbjct: 256 EALPESSPAAPGTVLRASAQ-GVDIATGQGVLRLLELQKAGGKRQSAEVFVRG 307
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A L+ L + H I L+LT+PD +GRG+KL SPVK+ AL I++
Sbjct: 1 MRLVFAGTPEFARLALEALLAAGHEIPLVLTQPDRPAGRGLKLTPSPVKEAALAAGIEVA 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPEDT 100
QP SL+L+G+Y A L + ++M+V ILP T
Sbjct: 61 QPRSLRLDGRYPDEALAAQARLVAVAPEVMVVAAYGLILPRWT 103
>gi|406675259|ref|ZP_11082448.1| methionyl-tRNA formyltransferase [Aeromonas veronii AMC35]
gi|404627591|gb|EKB24391.1| methionyl-tRNA formyltransferase [Aeromonas veronii AMC35]
Length = 314
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I ++TS +L +KL +L ++DTI + T + Q + +YA + K EA +D
Sbjct: 158 IAADETSASLYDKLAELGPQALVDTINAMAAGETA--AEAQDDALANYAEKLSKEEARID 215
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISY-QNKKKFLKIWKAHALSIESTKKPGTILNVNF 213
WS+ A I R I +FNP+P IS+ + + +K+W+A + + + GT+L +
Sbjct: 216 WSMEAVAIERCIRSFNPWP------ISWFEVADQTVKVWQAAVIDSDHGQPAGTLLKAD- 268
Query: 214 HNGILVVCGKNVIKLLELQKNNKKKISATEFIN 246
GI + GK V++LL LQ KK +S ++ +N
Sbjct: 269 KQGIDIATGKGVLRLLTLQPPGKKAMSVSDLLN 301
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
+K+IFAGT AA L L +S+H +V + T+PD +GRG KL SPVK+ AL H++ +
Sbjct: 4 LKLIFAGTPDFAARHLAALLSSDHEVVAVYTQPDKPAGRGQKLTASPVKELALAHNLPVY 63
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP SL+ E L + D+M+V+ ILP
Sbjct: 64 QPASLR--------KEEAQAELAALGADLMVVVAYGLILP 95
>gi|385799658|ref|YP_005836062.1| methionyl-tRNA formyltransferase [Halanaerobium praevalens DSM
2228]
gi|309389022|gb|ADO76902.1| methionyl-tRNA formyltransferase [Halanaerobium praevalens DSM
2228]
Length = 314
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 129/315 (40%), Gaps = 81/315 (25%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
MKIIF GT A L L N E I ++T+PD SGRG K+N+S +K+ AL ++I
Sbjct: 1 MKIIFMGTPEFAVPALVELENDEEIEIKAVVTQPDRKSGRGQKINYSDIKEKALALDLEI 60
Query: 60 IQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-----------------------IL 96
+Q S +N K + + L +IE D ++V+ +L
Sbjct: 61 LQ--SENVNQK------DFLEKLKEIEPDFIVVVAFGQKLSPELLAIPKFGCINLHASLL 112
Query: 97 P------------------------------EDTSLTLQNKLEKLSKILIIDTIKKIEYD 126
P +D + Q ++E + D K+
Sbjct: 113 PKYRGSSPIHKAIIDGKSKTGNTTMYMAEGWDDGDIIYQQEIEIKRDDTVGDLHDKMAKK 172
Query: 127 MTKLFFKPQSNIGESYAPLIKKNEA-------------VLDWSLSAKTIMRKINAFNPFP 173
L K +I + AP I +N++ +DW+ A+ I I NP+P
Sbjct: 173 GANLLLKTLKDIKTAEAPKISQNDSEATFAYKIDKSLGSIDWNQKAENIYNLIRGVNPWP 232
Query: 174 GAKTYYISYQNKKKFLKIWKAHALSIESTK-KPGTILNVNFHNGILVVCGKNVIKLLELQ 232
GA S N +K +KIW++ T KPGTI+ N +GILV VI + +LQ
Sbjct: 233 GA----YSVLNGEK-IKIWESKISDYPDTNLKPGTIIKANQKDGILVQTASGVISIEKLQ 287
Query: 233 KNNKKKISATEFING 247
KKI F+NG
Sbjct: 288 LPGGKKIDYYSFLNG 302
>gi|437279822|ref|ZP_20727808.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435170790|gb|ELN56521.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
Length = 315
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 159 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-APEAQNEALVTHAEKLSKEEARID 216
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 217 WSLSAVQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 270
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 271 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 309
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
++IIFAGT AA LD L S HN+V + T+PD +GR KL SPVK A + + +
Sbjct: 5 LRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRSKKLMPSPVKVLAEEKGLPVF 64
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILP 97
QP+SL+ E +L+ + D+M+V+ ILP
Sbjct: 65 QPVSLR--------PQENQQLVADLHADVMVVVAYGLILP 96
>gi|390934820|ref|YP_006392325.1| Methionyl-tRNA formyltransferase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570321|gb|AFK86726.1| Methionyl-tRNA formyltransferase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 313
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
IL ED + T+ +KL L ++ID I + + T + K Q + +YAP+++K+ +++
Sbjct: 156 ILEEDNAETVHDKLAVLGGDVLIDAISMMS-NGTLMSVK-QDDSKATYAPMLEKSMGLIN 213
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W A I I P+PGA TYY LKIW A +KPGTI++ +
Sbjct: 214 WEKDAVEIRNLIRGLRPWPGAYTYY-----NGSMLKIWSADVYHYFGDEKPGTIIDSD-- 266
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+ +++ CGK +K++E+Q ++++ +++ G
Sbjct: 267 DTLVIKCGKEALKVIEIQGEGTRRMNVEDYLRG 299
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M I+F GT A L L S HN++L +T+PD GRG K++F PVK++A+K+ I++
Sbjct: 1 MNIVFMGTPEFAVPSLKRLVESGHNVMLAITQPDKPKGRGKKMSFPPVKEFAIKYGIEVY 60
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG-ILPED 99
QP LK N + A E + LN E ++ G ILPE+
Sbjct: 61 QPFKLKNNEE----AFEKIRGLNP-ELIVVAAYGKILPEE 95
>gi|84514538|ref|ZP_01001902.1| methionyl-tRNA formyltransferase [Loktanella vestfoldensis SKA53]
gi|84511589|gb|EAQ08042.1| methionyl-tRNA formyltransferase [Loktanella vestfoldensis SKA53]
Length = 299
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I +DT+ L ++L + L+++ ++++ D+T +PQ + G +YA I K E +D
Sbjct: 155 IAADDTTGALHDRLSAMGARLVVEALRRLP-DLTP---EPQPDEGVTYAAKIDKAEGRVD 210
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
W+ A T+ R+IN +PFPGA + + K L A + + PGT+L
Sbjct: 211 WAQPAATVARQINGLSPFPGA--WCDVAGERVKLLG-----AETADGNAAPGTVL----- 258
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G + C + + Q+ K+ + A + +NG
Sbjct: 259 DGFTIACATGAVTITTAQREGKRAMPAADVLNG 291
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+IIF GT + +LD L + H+IV + T+P +GRG K V AL+ + +
Sbjct: 1 MRIIFMGTPEFSVPVLDALVAAGHDIVTVYTQPPRPAGRGKKDRPQAVHLRALELGLPVR 60
Query: 61 QPISLK 66
P+ L+
Sbjct: 61 HPVGLR 66
>gi|332653343|ref|ZP_08419088.1| methionyl-tRNA formyltransferase [Ruminococcaceae bacterium D16]
gi|332518489|gb|EGJ48092.1| methionyl-tRNA formyltransferase [Ruminococcaceae bacterium D16]
Length = 307
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 66/307 (21%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKI 59
M+I+F GT A L+ L + H + + +PD GR KL VK A H I +
Sbjct: 1 MRIVFMGTPDFAVPSLEALVAAGHEVCGVFCQPDKPVGRHQNKLQPPAVKVCAQSHDIPV 60
Query: 60 IQPISLKLNGKYHKIANETHKLL-----NKIEFDIMIVM-----------------GILP 97
QP L+ ++ +L+ +I D ++ + G P
Sbjct: 61 FQPTKLRDGTALAQLQELNPELIVVAAYGRILPDDILALPPKGCINVHSSLLPKYRGAAP 120
Query: 98 ---------EDTSLTLQNKLEKLSKILIIDTIK-------------------------KI 123
++T +T+ + +L IID +K K+
Sbjct: 121 INWAVVNGDKETGVTIMHMATELDAGDIIDQVKTPIDPDENVEAVHDRLAQLGGELLVKV 180
Query: 124 EYDMTKLFFK--PQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYIS 181
D+ K PQ + + AP++ + + +DWS SAK I ++ P+P T +
Sbjct: 181 VADIAAGTAKRTPQDHSQATLAPMLSRALSPIDWSRSAKEIHNQVRGLTPWPATSTDILG 240
Query: 182 YQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKIS 240
+K++ IE+ K PGT++ N GI V CG VI+L E+Q +++S
Sbjct: 241 -----DTIKVFAVEEPGIETGKAPGTVIAAN-KAGIDVACGDGKVIRLTEIQAPGSRRMS 294
Query: 241 ATEFING 247
A ++ G
Sbjct: 295 AANYLAG 301
>gi|383790311|ref|YP_005474885.1| methionyl-tRNA formyltransferase [Spirochaeta africana DSM 8902]
gi|383106845|gb|AFG37178.1| methionyl-tRNA formyltransferase [Spirochaeta africana DSM 8902]
Length = 324
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 126/319 (39%), Gaps = 76/319 (23%)
Query: 1 MKIIFAGTSISAAAILDTL-YNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59
M+I+FAGT A L L ++ +V +LT P +GRG +L SPV A + + +
Sbjct: 1 MRILFAGTPEFAVPSLRALARRADIELVGVLTAPARPAGRGRRLQPSPVAAAAAELGLPV 60
Query: 60 IQPISLKLNGKYHKIA----------------------------NETHKLLNKIEFDIMI 91
+ P L + A N LL + I
Sbjct: 61 LTPQRLGREAREQAAALGADLLVVVAYGRIFGPKFLELFAHGGINLHPSLLPRHRGPAPI 120
Query: 92 VMGILPEDT--SLTLQN-KLEKLSKILIIDTIKKIEYDMTKLFF---------------- 132
IL D LT+Q LE + +++ +++E T
Sbjct: 121 PATILSGDAEAGLTVQQLALEMDAGDILLQERRRLEGSETTAVLYPWAAETGAELVVQAV 180
Query: 133 ----------KPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPFPGAKTYYISY 182
+PQ + +Y L++K++ +DW A+ I R I A+NP+PGA + S
Sbjct: 181 QGIADGTVRPQPQDHDLATYCGLLQKDDGAIDWFRPAEEIDRLIRAYNPYPGA---FTSL 237
Query: 183 QNKKKFLKIWKA---HAL----------SIESTKKPGTILNVNFHNGILVVCGKNVIKLL 229
+K L +W++ H L + + +PG +L ++ +GILV G + +
Sbjct: 238 DGQK--LTLWESSGVHPLPAGDPGEDSSTASAACRPGQVLQIDRQHGILVQTGTQALGIT 295
Query: 230 ELQKNNKKKISATEFINGC 248
+LQ +KK + F NG
Sbjct: 296 QLQLAHKKNLDWRSFCNGA 314
>gi|398819146|ref|ZP_10577707.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. YR681]
gi|398230149|gb|EJN16210.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. YR681]
Length = 307
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 15/149 (10%)
Query: 100 TSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSA 159
T+L L ++L +L L++ + + D L K QS G +YA I K EA + W+ A
Sbjct: 163 TALDLHDRLSRLGADLMVRAMAAL--DRGGLQLKKQSEDGVTYAAKIDKAEARIHWTKPA 220
Query: 160 KTIMRKINAFNPFPGAKTYYISYQNKK-KFLKIWKAHALSIESTKKPGTILNVNFHNGIL 218
+ ++R I+ +PFPGA + +N + K L+ A + + PG +L+ + +
Sbjct: 221 RDVLRHIHGLSPFPGA---WAELENARVKILRCELA-----KGSGTPGEVLD----DQLT 268
Query: 219 VVCGKNVIKLLELQKNNKKKISATEFING 247
+ CG I++LELQ+ K ++ A +F+ G
Sbjct: 269 IACGDGAIRILELQREGKARMQAVDFLRG 297
>gi|437384627|ref|ZP_20750611.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435201728|gb|ELN85613.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
Length = 268
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I EDTS +L NKL +L +I T+K++ D T + Q+ ++A + K EA +D
Sbjct: 112 ITAEDTSGSLYNKLAELGPQGLITTLKQL-ADGTA-APEAQNEALVTHAEKLSKEEARID 169
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WSLSA + R I AFNP+P ++ + +K+W+A + + PGTIL
Sbjct: 170 WSLSAVQLERCIRAFNPWP---MSWLEIDGQP--VKVWQASVIEDATQSLPGTILAAT-K 223
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKNIKYFI 256
GI V GK ++ LL LQ KK +SA + +N ++FI
Sbjct: 224 QGIQVATGKGILNLLSLQPAGKKAMSAQDLLN---SRREWFI 262
>gi|389795254|ref|ZP_10198384.1| methionyl-tRNA formyltransferase [Rhodanobacter fulvus Jip2]
gi|388431031|gb|EIL88135.1| methionyl-tRNA formyltransferase [Rhodanobacter fulvus Jip2]
Length = 308
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 99 DTSLTLQNKLEKLSKILIIDTIKKIE-YDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSL 157
DT TL ++L L ++ + ++++ DM PQ++ G +YA + K EA LD+
Sbjct: 159 DTGGTLHDRLSALGADVLAEGLQRLRARDMPAAV--PQADDGVTYAHKLDKAEAKLDFQR 216
Query: 158 SAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGI 217
A + R++ AF+P+P A+ + L+IW A A+ I PG+++ +GI
Sbjct: 217 PAIELERQVRAFDPWPVAEGEIAGER-----LRIWAAQAIDIVHHAVPGSVIAAG-RDGI 270
Query: 218 LVVCGKNVIKLLELQKNNKKKISATEFIN 246
V CG+ +++L +Q+ K+I +++N
Sbjct: 271 DVACGQGALRVLAVQRAGGKRIGVMDYLN 299
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
M+++FAGT A LD S +V + T+PD +GRG KL SPVK+ AL I +
Sbjct: 1 MRLVFAGTPDFAVPCLDACRGSGAEVVAVYTQPDRPAGRGRKLTPSPVKQAALAAGIAVY 60
Query: 61 QPISLK 66
QP SLK
Sbjct: 61 QPDSLK 66
>gi|422110717|ref|ZP_16380631.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378545|emb|CBX22817.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 338
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 95 ILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLD 154
I P DT+ + + L ++ ++ +++++ +L Q G +YA + K EA +D
Sbjct: 186 IRPTDTANEVHDALMEIGAAAVVADLQQLQ-SKGRLNAVKQPEEGVTYAQKLSKEEARID 244
Query: 155 WSLSAKTIMRKINAFNPFPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFH 214
WS SA I RKI AFNP P A ++ YQ K +KI +A ++ + G +L+ +
Sbjct: 245 WSESAAVIERKIRAFNPVPAA---WVEYQGKP--MKIRRAEVVAQQGAA--GEVLSYSA- 296
Query: 215 NGILVVCGKNVIKLLELQKNNKKKISATEFING 247
+G++V CG+N +K+ ELQ K+++ F G
Sbjct: 297 DGLVVACGENALKITELQPAGGKRMNIAAFAAG 329
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60
MK+IFAGT AAA L + + I L+LT+PD GRGM+L PVK+ AL+ +++
Sbjct: 31 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVA 90
Query: 61 QPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG---ILPED 99
QP L+ N E ++L ++E D+M+V ILP+D
Sbjct: 91 QPEKLRNNA-------EALQMLKEVEADVMVVAAYGLILPQD 125
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,794,693,632
Number of Sequences: 23463169
Number of extensions: 151174841
Number of successful extensions: 418927
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3175
Number of HSP's successfully gapped in prelim test: 1302
Number of HSP's that attempted gapping in prelim test: 408038
Number of HSP's gapped (non-prelim): 8276
length of query: 258
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 119
effective length of database: 9,097,814,876
effective search space: 1082639970244
effective search space used: 1082639970244
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)