Query psy5230
Match_columns 258
No_of_seqs 179 out of 1247
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 21:01:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5230.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5230hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tqq_A Methionyl-tRNA formyltr 100.0 1.8E-62 6.1E-67 433.3 28.7 241 1-257 3-313 (314)
2 3rfo_A Methionyl-tRNA formyltr 100.0 2E-62 7E-67 433.1 26.3 241 1-257 5-314 (317)
3 3q0i_A Methionyl-tRNA formyltr 100.0 6.1E-62 2.1E-66 430.3 28.5 241 1-257 8-318 (318)
4 1fmt_A Methionyl-tRNA FMet for 100.0 3.4E-60 1.2E-64 418.9 29.1 240 1-256 4-313 (314)
5 2bln_A Protein YFBG; transfera 100.0 9.4E-57 3.2E-61 395.7 26.8 236 1-257 1-305 (305)
6 2bw0_A 10-FTHFDH, 10-formyltet 100.0 4.5E-51 1.5E-55 362.8 25.8 226 1-246 23-329 (329)
7 1z7e_A Protein aRNA; rossmann 100.0 6.5E-49 2.2E-53 379.3 24.8 235 1-256 1-304 (660)
8 1zgh_A Methionyl-tRNA formyltr 99.9 2.8E-23 9.5E-28 177.4 12.5 90 94-197 151-243 (260)
9 2ywr_A Phosphoribosylglycinami 99.8 5.9E-18 2E-22 141.6 13.6 136 1-151 2-213 (216)
10 3av3_A Phosphoribosylglycinami 99.7 6.8E-17 2.3E-21 134.7 11.7 133 2-153 5-211 (212)
11 3auf_A Glycinamide ribonucleot 99.7 8.1E-16 2.8E-20 129.5 13.4 116 1-131 23-212 (229)
12 1jkx_A GART;, phosphoribosylgl 99.6 2.2E-14 7.7E-19 119.4 11.7 118 1-133 1-192 (212)
13 1meo_A Phosophoribosylglycinam 99.6 9.1E-14 3.1E-18 115.4 15.1 121 1-136 1-195 (209)
14 3da8_A Probable 5'-phosphoribo 99.5 5.9E-14 2E-18 116.8 12.2 115 1-131 13-200 (215)
15 3tqr_A Phosphoribosylglycinami 99.4 1.1E-12 3.7E-17 109.2 12.9 117 1-132 6-195 (215)
16 3p9x_A Phosphoribosylglycinami 99.4 1.2E-12 4E-17 108.5 12.5 121 1-138 3-199 (211)
17 3kcq_A Phosphoribosylglycinami 99.4 2.2E-12 7.5E-17 107.3 11.5 110 2-131 10-193 (215)
18 4ds3_A Phosphoribosylglycinami 99.3 6.9E-12 2.3E-16 103.9 11.3 114 2-130 9-196 (209)
19 3n0v_A Formyltetrahydrofolate 99.1 3.6E-10 1.2E-14 97.9 10.8 111 1-130 91-276 (286)
20 3o1l_A Formyltetrahydrofolate 99.1 7.2E-10 2.5E-14 96.6 12.2 111 1-130 106-291 (302)
21 3lou_A Formyltetrahydrofolate 99.1 9.2E-10 3.2E-14 95.6 11.0 111 1-130 96-281 (292)
22 3obi_A Formyltetrahydrofolate 98.9 1.9E-09 6.6E-14 93.4 6.6 112 1-130 90-276 (288)
23 3nrb_A Formyltetrahydrofolate 98.9 2.6E-09 8.9E-14 92.6 7.2 112 1-130 89-275 (287)
24 3l4b_C TRKA K+ channel protien 95.9 0.02 6.9E-07 46.6 7.2 72 1-93 1-72 (218)
25 1lss_A TRK system potassium up 95.2 0.074 2.5E-06 39.3 7.7 72 1-93 5-76 (140)
26 3rc1_A Sugar 3-ketoreductase; 95.0 0.041 1.4E-06 48.3 6.4 67 1-93 28-96 (350)
27 3q2i_A Dehydrogenase; rossmann 94.8 0.048 1.6E-06 47.8 6.4 67 1-93 14-82 (354)
28 3db2_A Putative NADPH-dependen 94.7 0.042 1.4E-06 48.2 5.8 67 1-93 6-73 (354)
29 4had_A Probable oxidoreductase 94.6 0.073 2.5E-06 46.4 7.1 67 1-93 24-93 (350)
30 3fwz_A Inner membrane protein 94.6 0.11 3.6E-06 39.2 7.1 71 1-93 8-78 (140)
31 2glx_A 1,5-anhydro-D-fructose 94.6 0.087 3E-06 45.5 7.4 67 1-93 1-69 (332)
32 3euw_A MYO-inositol dehydrogen 94.5 0.08 2.7E-06 46.1 7.0 67 1-93 5-72 (344)
33 4hkt_A Inositol 2-dehydrogenas 94.4 0.1 3.4E-06 45.2 7.4 66 1-93 4-70 (331)
34 3llv_A Exopolyphosphatase-rela 94.2 0.15 5.1E-06 38.1 7.1 71 1-93 7-77 (141)
35 3ohs_X Trans-1,2-dihydrobenzen 93.9 0.1 3.5E-06 45.3 6.5 67 1-93 3-73 (334)
36 3e9m_A Oxidoreductase, GFO/IDH 93.8 0.1 3.6E-06 45.2 6.4 67 1-93 6-74 (330)
37 3ezy_A Dehydrogenase; structur 93.7 0.11 3.6E-06 45.4 6.3 67 1-93 3-71 (344)
38 3ec7_A Putative dehydrogenase; 93.6 0.2 6.8E-06 44.0 7.9 69 1-93 24-94 (357)
39 3nkl_A UDP-D-quinovosamine 4-d 93.5 0.058 2E-06 40.5 3.7 66 2-93 6-72 (141)
40 3mz0_A Inositol 2-dehydrogenas 93.5 0.19 6.6E-06 43.7 7.6 69 1-93 3-73 (344)
41 3evn_A Oxidoreductase, GFO/IDH 93.4 0.073 2.5E-06 46.2 4.7 67 1-93 6-74 (329)
42 3moi_A Probable dehydrogenase; 93.4 0.11 3.8E-06 46.1 5.9 67 1-93 3-71 (387)
43 2p2s_A Putative oxidoreductase 93.4 0.27 9.1E-06 42.6 8.2 67 1-93 5-73 (336)
44 4huj_A Uncharacterized protein 93.0 0.17 5.9E-06 41.1 6.1 49 1-60 24-72 (220)
45 3uuw_A Putative oxidoreductase 93.0 0.14 4.8E-06 43.8 5.8 65 1-93 7-73 (308)
46 4gqa_A NAD binding oxidoreduct 92.5 0.18 6E-06 45.1 5.9 67 1-93 27-103 (412)
47 4egs_A Ribose 5-phosphate isom 92.4 0.92 3.2E-05 35.9 9.4 75 1-93 35-119 (180)
48 2nvw_A Galactose/lactose metab 92.3 0.28 9.6E-06 45.0 7.1 67 1-93 40-115 (479)
49 3ic5_A Putative saccharopine d 92.2 0.28 9.7E-06 34.8 5.7 70 1-93 6-76 (118)
50 1zh8_A Oxidoreductase; TM0312, 92.2 0.26 8.8E-06 42.9 6.4 67 1-93 19-89 (340)
51 3cea_A MYO-inositol 2-dehydrog 92.1 0.29 1E-05 42.4 6.7 67 1-93 9-78 (346)
52 4g65_A TRK system potassium up 91.8 0.21 7.3E-06 45.6 5.6 72 1-93 4-75 (461)
53 4gmf_A Yersiniabactin biosynth 91.8 0.2 6.9E-06 44.5 5.3 49 1-61 8-58 (372)
54 2ho3_A Oxidoreductase, GFO/IDH 91.6 0.32 1.1E-05 41.8 6.4 66 1-93 2-69 (325)
55 3btv_A Galactose/lactose metab 91.6 0.23 7.7E-06 45.0 5.5 67 1-93 21-96 (438)
56 3e18_A Oxidoreductase; dehydro 91.6 0.42 1.4E-05 41.9 7.1 66 1-93 6-72 (359)
57 1ydw_A AX110P-like protein; st 91.5 0.45 1.5E-05 41.6 7.3 71 1-93 7-78 (362)
58 3oj0_A Glutr, glutamyl-tRNA re 91.4 0.23 7.8E-06 37.4 4.6 66 1-93 22-87 (144)
59 3l9w_A Glutathione-regulated p 91.3 0.45 1.5E-05 42.8 7.1 71 1-93 5-75 (413)
60 3d1l_A Putative NADP oxidoredu 91.3 0.65 2.2E-05 38.6 7.8 49 1-60 11-59 (266)
61 3c85_A Putative glutathione-re 91.2 0.38 1.3E-05 37.6 5.9 71 1-93 40-112 (183)
62 3u3x_A Oxidoreductase; structu 91.1 0.55 1.9E-05 41.2 7.4 67 1-93 27-95 (361)
63 4fb5_A Probable oxidoreductase 90.5 0.67 2.3E-05 40.5 7.5 68 1-93 26-101 (393)
64 1tlt_A Putative oxidoreductase 90.5 0.38 1.3E-05 41.2 5.8 48 1-59 6-55 (319)
65 2g1u_A Hypothetical protein TM 89.9 0.39 1.3E-05 36.5 4.8 30 1-30 20-49 (155)
66 4fzr_A SSFS6; structural genom 89.8 0.47 1.6E-05 41.6 5.8 48 1-62 16-68 (398)
67 3otg_A CALG1; calicheamicin, T 89.7 1.2 4.1E-05 38.9 8.4 49 1-63 21-74 (412)
68 2ahr_A Putative pyrroline carb 89.7 0.41 1.4E-05 39.6 5.1 47 1-59 4-50 (259)
69 3gt0_A Pyrroline-5-carboxylate 89.6 0.47 1.6E-05 39.1 5.4 47 1-59 3-53 (247)
70 3m2t_A Probable dehydrogenase; 89.4 0.41 1.4E-05 41.9 5.1 67 1-93 6-75 (359)
71 3i6i_A Putative leucoanthocyan 89.1 1.3 4.5E-05 38.0 8.1 77 1-93 11-90 (346)
72 3tsa_A SPNG, NDP-rhamnosyltran 89.1 1 3.5E-05 39.2 7.4 48 1-62 2-54 (391)
73 1h6d_A Precursor form of gluco 88.9 0.54 1.8E-05 42.4 5.6 69 1-93 84-157 (433)
74 3rsc_A CALG2; TDP, enediyne, s 88.8 1.6 5.5E-05 38.2 8.6 78 1-92 21-124 (415)
75 1id1_A Putative potassium chan 88.6 2 7E-05 32.2 8.0 73 1-93 4-78 (153)
76 3ia7_A CALG4; glycosysltransfe 88.6 2 6.8E-05 37.2 9.0 77 2-92 6-108 (402)
77 3ip3_A Oxidoreductase, putativ 88.3 0.4 1.4E-05 41.5 4.2 72 1-93 3-74 (337)
78 3ruf_A WBGU; rossmann fold, UD 88.3 1.4 4.8E-05 37.7 7.7 75 1-93 26-107 (351)
79 3tri_A Pyrroline-5-carboxylate 88.0 1.1 3.7E-05 37.9 6.6 48 1-60 4-54 (280)
80 3keo_A Redox-sensing transcrip 87.7 0.88 3E-05 37.1 5.6 84 2-112 86-172 (212)
81 3dty_A Oxidoreductase, GFO/IDH 87.5 0.63 2.2E-05 41.3 5.1 48 1-58 13-64 (398)
82 3oti_A CALG3; calicheamicin, T 87.4 1.4 4.8E-05 38.5 7.3 46 1-61 21-71 (398)
83 3v5n_A Oxidoreductase; structu 87.1 0.72 2.5E-05 41.3 5.3 48 1-58 38-89 (417)
84 3i23_A Oxidoreductase, GFO/IDH 87.0 0.94 3.2E-05 39.4 5.8 65 1-93 3-72 (349)
85 1xea_A Oxidoreductase, GFO/IDH 86.7 0.53 1.8E-05 40.4 4.0 47 1-59 3-51 (323)
86 1yqg_A Pyrroline-5-carboxylate 86.6 1.3 4.5E-05 36.5 6.3 48 1-60 1-49 (263)
87 3kux_A Putative oxidoreductase 86.6 2.2 7.4E-05 37.0 7.9 32 1-32 8-41 (352)
88 1rkx_A CDP-glucose-4,6-dehydra 86.4 1.9 6.5E-05 37.0 7.5 77 1-93 10-87 (357)
89 4h3v_A Oxidoreductase domain p 86.4 0.5 1.7E-05 41.3 3.7 68 1-93 7-82 (390)
90 1gy8_A UDP-galactose 4-epimera 85.9 5 0.00017 34.8 10.1 31 1-31 3-35 (397)
91 3ew7_A LMO0794 protein; Q8Y8U8 85.7 1.1 3.8E-05 35.4 5.2 67 1-93 1-68 (221)
92 2xdq_B Light-independent proto 85.4 1.8 6E-05 40.0 7.1 140 2-169 305-476 (511)
93 2ixa_A Alpha-N-acetylgalactosa 85.4 1.8 6.2E-05 38.9 7.0 71 1-93 21-98 (444)
94 3enk_A UDP-glucose 4-epimerase 84.8 4.2 0.00014 34.5 8.8 77 1-93 6-85 (341)
95 3gdo_A Uncharacterized oxidore 84.7 2.9 9.8E-05 36.4 7.8 64 1-93 6-72 (358)
96 4b4o_A Epimerase family protei 84.6 1.4 4.8E-05 36.9 5.6 33 1-33 1-34 (298)
97 3dhn_A NAD-dependent epimerase 84.5 1.7 5.9E-05 34.6 5.9 69 1-93 5-74 (227)
98 2dwc_A PH0318, 433AA long hypo 84.3 2.1 7.2E-05 38.2 6.9 34 1-34 20-53 (433)
99 2r6j_A Eugenol synthase 1; phe 84.2 4.4 0.00015 34.1 8.6 30 2-31 13-43 (318)
100 4id9_A Short-chain dehydrogena 83.7 11 0.00036 32.0 10.9 32 1-32 20-52 (347)
101 3rjz_A N-type ATP pyrophosphat 83.6 5.4 0.00019 32.9 8.5 108 1-112 5-116 (237)
102 3dfz_A SIRC, precorrin-2 dehyd 82.9 7.4 0.00025 31.7 9.1 49 1-60 32-80 (223)
103 3slg_A PBGP3 protein; structur 82.9 1.3 4.3E-05 38.4 4.7 32 1-32 25-58 (372)
104 3qha_A Putative oxidoreductase 82.8 2.1 7.3E-05 36.2 6.0 29 1-29 16-44 (296)
105 3m2p_A UDP-N-acetylglucosamine 82.6 4 0.00014 34.2 7.7 31 1-31 3-34 (311)
106 1nvm_B Acetaldehyde dehydrogen 82.5 3.9 0.00013 35.1 7.6 49 1-59 5-55 (312)
107 3dqp_A Oxidoreductase YLBE; al 82.4 1.2 4.2E-05 35.4 4.1 32 1-32 1-33 (219)
108 1qgu_B Protein (nitrogenase mo 82.4 1.9 6.6E-05 39.9 5.9 76 2-93 362-441 (519)
109 2aef_A Calcium-gated potassium 82.1 2 6.9E-05 34.8 5.4 69 1-93 10-78 (234)
110 1kjq_A GART 2, phosphoribosylg 82.0 1.6 5.6E-05 38.2 5.1 35 1-35 12-46 (391)
111 3f4l_A Putative oxidoreductase 82.0 1 3.4E-05 39.1 3.7 32 1-32 3-37 (345)
112 2dc1_A L-aspartate dehydrogena 82.0 2.2 7.5E-05 34.8 5.6 32 1-32 1-32 (236)
113 1mio_B Nitrogenase molybdenum 81.9 2 7E-05 38.9 5.8 76 2-93 314-392 (458)
114 4ew6_A D-galactose-1-dehydroge 81.4 3.1 0.00011 35.8 6.6 32 1-32 26-59 (330)
115 1orr_A CDP-tyvelose-2-epimeras 81.4 5.3 0.00018 33.8 8.1 78 1-93 2-80 (347)
116 1udb_A Epimerase, UDP-galactos 81.0 9.5 0.00032 32.2 9.6 77 1-93 1-80 (338)
117 3c1a_A Putative oxidoreductase 80.8 0.53 1.8E-05 40.3 1.4 32 1-32 11-43 (315)
118 1rpn_A GDP-mannose 4,6-dehydra 80.6 3 0.0001 35.3 6.2 78 1-93 15-93 (335)
119 2rh8_A Anthocyanidin reductase 80.5 5.7 0.0002 33.6 8.0 33 1-33 10-43 (338)
120 1ek6_A UDP-galactose 4-epimera 80.5 7 0.00024 33.1 8.6 83 1-93 3-88 (348)
121 3oqb_A Oxidoreductase; structu 80.2 1.9 6.6E-05 37.8 4.9 67 1-93 7-90 (383)
122 4ezb_A Uncharacterized conserv 80.2 4.4 0.00015 34.7 7.1 29 1-29 25-54 (317)
123 3r6d_A NAD-dependent epimerase 80.0 1.8 6E-05 34.5 4.3 30 1-30 5-37 (221)
124 1f0k_A MURG, UDP-N-acetylgluco 79.9 4.9 0.00017 34.1 7.4 81 1-93 7-103 (364)
125 2i99_A MU-crystallin homolog; 79.9 5.2 0.00018 34.1 7.5 45 1-56 136-181 (312)
126 1pgj_A 6PGDH, 6-PGDH, 6-phosph 79.7 2.2 7.5E-05 39.0 5.3 30 1-31 2-31 (478)
127 3pdi_A Nitrogenase MOFE cofact 79.7 3.2 0.00011 38.0 6.4 75 2-93 334-408 (483)
128 3e82_A Putative oxidoreductase 79.7 5 0.00017 35.0 7.4 32 1-32 8-41 (364)
129 3gpi_A NAD-dependent epimerase 79.6 2.7 9.2E-05 34.8 5.5 33 1-33 4-36 (286)
130 1p8a_A Protein tyrosine phosph 79.6 7 0.00024 29.4 7.3 75 1-93 5-86 (146)
131 1np3_A Ketol-acid reductoisome 79.6 2.5 8.7E-05 36.6 5.4 47 1-59 17-63 (338)
132 2iuy_A Avigt4, glycosyltransfe 79.4 4.6 0.00016 34.1 7.0 31 1-32 4-55 (342)
133 3o9z_A Lipopolysaccaride biosy 79.3 3.4 0.00012 35.3 6.1 32 1-32 4-36 (312)
134 1qyd_A Pinoresinol-lariciresin 79.3 4.9 0.00017 33.5 7.0 30 1-30 5-35 (313)
135 1qyc_A Phenylcoumaran benzylic 78.9 7.7 0.00026 32.2 8.2 29 1-29 5-34 (308)
136 2q1w_A Putative nucleotide sug 78.9 5.6 0.00019 33.7 7.4 31 1-31 22-53 (333)
137 1ks9_A KPA reductase;, 2-dehyd 78.7 2.7 9.3E-05 34.9 5.2 29 1-29 1-29 (291)
138 2hmt_A YUAA protein; RCK, KTN, 78.6 2.3 7.8E-05 31.0 4.2 28 2-29 8-35 (144)
139 1jay_A Coenzyme F420H2:NADP+ o 78.4 2.5 8.6E-05 33.5 4.7 29 1-29 1-30 (212)
140 2iyf_A OLED, oleandomycin glyc 78.1 11 0.00036 33.0 9.2 79 1-93 8-111 (430)
141 3rh0_A Arsenate reductase; oxi 77.8 11 0.00037 28.6 7.9 72 1-93 21-99 (148)
142 4ina_A Saccharopine dehydrogen 77.7 5.5 0.00019 35.4 7.2 74 1-93 2-83 (405)
143 3oa2_A WBPB; oxidoreductase, s 77.5 4.1 0.00014 34.9 6.1 32 1-32 4-36 (318)
144 3c1o_A Eugenol synthase; pheny 77.4 4.9 0.00017 33.7 6.5 30 1-30 5-35 (321)
145 2gas_A Isoflavone reductase; N 77.4 4 0.00014 34.0 5.9 30 1-30 3-33 (307)
146 3ijp_A DHPR, dihydrodipicolina 77.2 1.6 5.4E-05 37.3 3.3 34 1-34 22-57 (288)
147 2c20_A UDP-glucose 4-epimerase 76.9 3.3 0.00011 34.9 5.3 30 1-30 2-32 (330)
148 2iya_A OLEI, oleandomycin glyc 76.5 13 0.00045 32.4 9.3 47 1-61 13-64 (424)
149 3a06_A 1-deoxy-D-xylulose 5-ph 76.3 5.1 0.00018 35.4 6.3 82 2-93 5-92 (376)
150 4egb_A DTDP-glucose 4,6-dehydr 76.2 6 0.0002 33.6 6.8 78 1-93 25-105 (346)
151 3h2s_A Putative NADH-flavin re 76.1 3.5 0.00012 32.5 5.0 30 1-30 1-31 (224)
152 3u7q_B Nitrogenase molybdenum- 75.9 4.7 0.00016 37.3 6.3 76 2-93 366-445 (523)
153 3ktd_A Prephenate dehydrogenas 75.9 4.4 0.00015 35.3 5.9 46 1-59 9-54 (341)
154 2w70_A Biotin carboxylase; lig 75.8 1.2 3.9E-05 40.1 2.1 33 2-34 4-36 (449)
155 2cwd_A Low molecular weight ph 75.6 9.1 0.00031 29.4 7.0 75 1-93 5-90 (161)
156 3upl_A Oxidoreductase; rossman 75.5 5.1 0.00017 36.3 6.3 32 1-32 24-56 (446)
157 3ius_A Uncharacterized conserv 75.3 2.6 8.9E-05 34.8 4.1 31 1-31 6-36 (286)
158 2f1k_A Prephenate dehydrogenas 75.3 3.3 0.00011 34.3 4.8 28 1-28 1-28 (279)
159 4gx0_A TRKA domain protein; me 75.2 4 0.00014 37.8 5.8 70 1-92 128-198 (565)
160 3h4t_A Glycosyltransferase GTF 75.0 8.7 0.0003 33.6 7.7 48 1-62 1-53 (404)
161 3fhl_A Putative oxidoreductase 74.6 2.3 7.8E-05 37.1 3.7 32 1-32 6-39 (362)
162 2l17_A Synarsc, arsenate reduc 74.6 5.5 0.00019 29.6 5.3 70 2-93 6-82 (134)
163 1i36_A Conserved hypothetical 74.5 3.3 0.00011 34.0 4.6 28 1-28 1-28 (264)
164 4dim_A Phosphoribosylglycinami 74.4 5.7 0.00019 34.8 6.3 33 1-34 8-40 (403)
165 2vsy_A XCC0866; transferase, g 74.3 12 0.0004 34.1 8.6 75 1-93 206-289 (568)
166 2z1m_A GDP-D-mannose dehydrata 74.3 8.3 0.00028 32.4 7.2 30 1-30 4-34 (345)
167 2vt3_A REX, redox-sensing tran 74.0 5.7 0.0002 32.2 5.7 39 1-39 86-126 (215)
168 2vns_A Metalloreductase steap3 74.0 3.9 0.00013 32.8 4.7 28 1-28 29-56 (215)
169 1sb8_A WBPP; epimerase, 4-epim 73.9 12 0.00042 31.7 8.3 31 1-31 28-59 (352)
170 1lnq_A MTHK channels, potassiu 73.6 3.3 0.00011 35.6 4.4 69 1-93 116-184 (336)
171 2x4g_A Nucleoside-diphosphate- 73.2 5 0.00017 33.9 5.5 32 1-32 14-46 (342)
172 3u7q_A Nitrogenase molybdenum- 73.0 3.8 0.00013 37.6 4.9 73 2-93 350-424 (492)
173 2ew2_A 2-dehydropantoate 2-red 72.7 4.1 0.00014 34.1 4.8 29 1-29 4-32 (316)
174 1t2a_A GDP-mannose 4,6 dehydra 72.5 10 0.00034 32.6 7.4 32 2-33 26-58 (375)
175 3qy9_A DHPR, dihydrodipicolina 72.4 5.7 0.0002 32.8 5.4 33 1-33 4-36 (243)
176 1z45_A GAL10 bifunctional prot 72.3 16 0.00056 34.5 9.4 77 1-93 12-91 (699)
177 3phh_A Shikimate dehydrogenase 72.3 17 0.00059 30.4 8.5 47 2-61 120-166 (269)
178 3pef_A 6-phosphogluconate dehy 72.2 4.4 0.00015 33.9 4.8 27 1-27 2-28 (287)
179 2wm3_A NMRA-like family domain 72.2 11 0.00039 31.1 7.4 72 1-93 6-79 (299)
180 1kew_A RMLB;, DTDP-D-glucose 4 71.7 3.7 0.00012 35.1 4.3 31 1-31 1-33 (361)
181 3dtt_A NADP oxidoreductase; st 71.6 4.8 0.00016 32.9 4.8 28 1-28 20-47 (245)
182 2v6g_A Progesterone 5-beta-red 71.6 4.8 0.00016 34.4 5.0 71 1-93 2-79 (364)
183 1xgk_A Nitrogen metabolite rep 71.4 9 0.00031 33.0 6.8 31 1-31 6-37 (352)
184 1z82_A Glycerol-3-phosphate de 71.3 4.5 0.00015 34.7 4.8 30 1-31 15-44 (335)
185 4gwg_A 6-phosphogluconate dehy 71.2 5.1 0.00017 36.7 5.3 28 1-28 5-32 (484)
186 4etm_A LMPTP, low molecular we 70.9 34 0.0012 26.4 11.2 76 1-93 19-105 (173)
187 1db3_A GDP-mannose 4,6-dehydra 70.9 7.3 0.00025 33.4 6.1 30 1-30 2-32 (372)
188 3uw1_A Ribose-5-phosphate isom 70.8 3.8 0.00013 33.9 3.9 48 3-62 35-82 (239)
189 3e48_A Putative nucleoside-dip 70.5 4.8 0.00016 33.2 4.6 33 1-33 1-35 (289)
190 2pzm_A Putative nucleotide sug 70.4 10 0.00034 32.1 6.8 31 1-31 21-52 (330)
191 2pgd_A 6-phosphogluconate dehy 70.2 7.6 0.00026 35.4 6.2 30 1-31 3-32 (482)
192 2dt5_A AT-rich DNA-binding pro 70.0 3.2 0.00011 33.6 3.2 66 1-93 81-147 (211)
193 3doj_A AT3G25530, dehydrogenas 69.8 5.2 0.00018 34.0 4.8 28 1-28 22-49 (310)
194 1txg_A Glycerol-3-phosphate de 69.8 4.1 0.00014 34.6 4.2 29 1-29 1-29 (335)
195 2raf_A Putative dinucleotide-b 69.6 5.8 0.0002 31.6 4.8 29 1-29 20-48 (209)
196 2gi4_A Possible phosphotyrosin 69.4 17 0.00058 27.6 7.2 75 1-93 2-88 (156)
197 2gf2_A Hibadh, 3-hydroxyisobut 69.3 4.6 0.00016 33.7 4.3 27 1-27 1-27 (296)
198 2bll_A Protein YFBG; decarboxy 69.3 7.6 0.00026 32.7 5.7 31 1-31 1-33 (345)
199 1jf8_A Arsenate reductase; ptp 69.3 15 0.0005 27.1 6.6 70 2-93 5-81 (131)
200 3gg2_A Sugar dehydrogenase, UD 69.2 5.1 0.00017 36.3 4.8 30 1-30 3-32 (450)
201 2iw1_A Lipopolysaccharide core 69.1 15 0.0005 31.1 7.6 77 1-93 1-87 (374)
202 3oh8_A Nucleoside-diphosphate 68.8 6.6 0.00023 35.9 5.5 34 1-34 148-182 (516)
203 2p5y_A UDP-glucose 4-epimerase 68.6 14 0.00049 30.6 7.3 29 1-29 1-30 (311)
204 3g0o_A 3-hydroxyisobutyrate de 68.5 5.8 0.0002 33.5 4.8 28 1-28 8-35 (303)
205 2iz1_A 6-phosphogluconate dehy 68.1 7.3 0.00025 35.4 5.6 29 1-30 6-34 (474)
206 1d1q_A Tyrosine phosphatase (E 68.1 14 0.00048 28.2 6.6 78 1-93 8-94 (161)
207 1mv8_A GMD, GDP-mannose 6-dehy 68.0 4.8 0.00016 36.1 4.4 29 1-29 1-29 (436)
208 2yy7_A L-threonine dehydrogena 68.0 12 0.00042 30.9 6.7 70 1-93 3-75 (312)
209 3dm5_A SRP54, signal recogniti 67.9 15 0.00052 33.1 7.6 82 3-93 103-189 (443)
210 2hk9_A Shikimate dehydrogenase 67.8 7.1 0.00024 32.6 5.1 30 1-31 130-159 (275)
211 2i76_A Hypothetical protein; N 67.7 3.4 0.00012 34.5 3.1 45 1-57 3-47 (276)
212 3c24_A Putative oxidoreductase 67.6 6 0.0002 33.0 4.6 27 1-27 12-39 (286)
213 4amg_A Snogd; transferase, pol 67.5 5.5 0.00019 34.4 4.6 32 1-33 23-59 (400)
214 1leh_A Leucine dehydrogenase; 67.4 10 0.00035 33.3 6.3 47 1-59 174-220 (364)
215 2czc_A Glyceraldehyde-3-phosph 67.4 25 0.00087 30.1 8.7 49 1-60 3-52 (334)
216 1jl3_A Arsenate reductase; alp 67.1 18 0.0006 26.8 6.8 70 2-93 5-81 (139)
217 4dll_A 2-hydroxy-3-oxopropiona 67.1 5.4 0.00019 34.1 4.3 27 1-27 32-58 (320)
218 1hdo_A Biliverdin IX beta redu 67.0 7.1 0.00024 30.1 4.7 32 1-32 4-36 (206)
219 1xq6_A Unknown protein; struct 66.9 12 0.0004 29.8 6.2 30 1-30 5-37 (253)
220 1y6j_A L-lactate dehydrogenase 66.8 22 0.00074 30.4 8.1 29 1-29 8-38 (318)
221 2zyd_A 6-phosphogluconate dehy 66.5 8.1 0.00028 35.2 5.6 27 1-27 16-42 (480)
222 3rof_A Low molecular weight pr 66.3 32 0.0011 26.2 8.2 76 1-93 7-90 (158)
223 2gek_A Phosphatidylinositol ma 66.2 6.9 0.00024 33.6 4.9 32 1-32 21-61 (406)
224 2wmy_A WZB, putative acid phos 66.1 24 0.00081 26.6 7.4 72 2-93 10-88 (150)
225 1vpd_A Tartronate semialdehyde 66.0 6 0.00021 33.0 4.4 26 1-26 6-31 (299)
226 3pwz_A Shikimate dehydrogenase 65.7 20 0.00067 30.0 7.5 31 2-32 122-152 (272)
227 2h78_A Hibadh, 3-hydroxyisobut 65.4 6.2 0.00021 33.1 4.4 28 1-28 4-31 (302)
228 2vpq_A Acetyl-COA carboxylase; 65.3 4.8 0.00016 36.0 3.8 34 1-34 2-35 (451)
229 3qsg_A NAD-binding phosphogluc 65.2 5.6 0.00019 33.8 4.1 31 1-31 25-55 (312)
230 1yb4_A Tartronic semialdehyde 65.1 4.7 0.00016 33.6 3.5 27 1-27 4-30 (295)
231 1n7h_A GDP-D-mannose-4,6-dehyd 64.9 8.4 0.00029 33.2 5.2 32 2-33 30-62 (381)
232 2rcy_A Pyrroline carboxylate r 64.8 17 0.00058 29.5 6.9 30 1-31 5-38 (262)
233 2jl1_A Triphenylmethane reduct 64.6 13 0.00044 30.4 6.1 70 1-93 1-73 (287)
234 2py6_A Methyltransferase FKBM; 64.3 8.3 0.00028 34.3 5.1 31 2-32 54-84 (409)
235 3l6d_A Putative oxidoreductase 64.2 7.4 0.00025 33.0 4.6 28 1-28 10-37 (306)
236 2y0c_A BCEC, UDP-glucose dehyd 64.2 7.2 0.00025 35.5 4.8 30 1-30 9-38 (478)
237 3dfu_A Uncharacterized protein 63.9 2.2 7.6E-05 35.2 1.2 29 1-29 7-35 (232)
238 3e8x_A Putative NAD-dependent 63.9 8.4 0.00029 30.7 4.7 31 1-31 22-53 (236)
239 3cky_A 2-hydroxymethyl glutara 63.8 7.1 0.00024 32.6 4.4 27 1-27 5-31 (301)
240 3aek_A Light-independent proto 63.7 7.8 0.00027 34.8 4.8 72 2-93 309-384 (437)
241 3aek_B Light-independent proto 63.5 12 0.00042 34.5 6.2 73 2-92 282-355 (525)
242 3orq_A N5-carboxyaminoimidazol 63.3 27 0.00092 30.3 8.2 36 1-36 13-48 (377)
243 2axq_A Saccharopine dehydrogen 63.2 17 0.00058 33.0 7.0 71 1-93 24-95 (467)
244 3klj_A NAD(FAD)-dependent dehy 63.2 6.8 0.00023 34.4 4.3 78 2-93 148-226 (385)
245 3ajr_A NDP-sugar epimerase; L- 63.0 16 0.00053 30.4 6.4 66 2-93 1-69 (317)
246 4e21_A 6-phosphogluconate dehy 62.9 8.4 0.00029 33.7 4.8 27 1-27 23-49 (358)
247 3sxp_A ADP-L-glycero-D-mannohe 62.9 44 0.0015 28.3 9.5 32 1-32 11-45 (362)
248 3ghy_A Ketopantoate reductase 62.6 8.6 0.00029 32.9 4.8 29 1-29 4-32 (335)
249 1mio_A Nitrogenase molybdenum 62.5 21 0.00074 32.9 7.7 31 2-32 337-367 (533)
250 3k96_A Glycerol-3-phosphate de 62.3 8.3 0.00028 33.7 4.6 29 1-29 30-58 (356)
251 3nzo_A UDP-N-acetylglucosamine 62.3 28 0.00096 30.4 8.2 29 1-29 36-66 (399)
252 1p9l_A Dihydrodipicolinate red 62.1 10 0.00036 31.3 5.0 32 1-32 1-34 (245)
253 1vgv_A UDP-N-acetylglucosamine 62.1 27 0.00093 29.6 8.0 83 1-93 1-93 (384)
254 1v4v_A UDP-N-acetylglucosamine 62.1 15 0.0005 31.4 6.2 83 1-93 6-98 (376)
255 2izz_A Pyrroline-5-carboxylate 61.9 7.7 0.00026 33.1 4.3 27 1-27 23-53 (322)
256 1u2p_A Ptpase, low molecular w 61.5 22 0.00076 27.1 6.5 74 1-93 5-89 (163)
257 1bg6_A N-(1-D-carboxylethyl)-L 61.1 9.5 0.00032 32.6 4.8 28 1-28 5-32 (359)
258 3pdu_A 3-hydroxyisobutyrate de 60.8 6.5 0.00022 32.8 3.6 28 1-28 2-29 (287)
259 3i83_A 2-dehydropantoate 2-red 60.4 10 0.00035 32.2 4.8 29 1-29 3-31 (320)
260 2uyy_A N-PAC protein; long-cha 60.3 9.8 0.00033 32.1 4.7 27 1-27 31-57 (316)
261 3ax6_A Phosphoribosylaminoimid 60.3 13 0.00046 32.1 5.7 34 2-35 3-36 (380)
262 2a35_A Hypothetical protein PA 60.2 8.7 0.0003 29.9 4.1 30 1-30 6-38 (215)
263 3hwr_A 2-dehydropantoate 2-red 60.1 10 0.00035 32.2 4.8 29 1-29 20-48 (318)
264 2fek_A Low molecular weight pr 60.1 36 0.0012 26.1 7.6 72 2-93 24-102 (167)
265 3ing_A Homoserine dehydrogenas 59.9 8 0.00027 33.4 4.0 32 1-32 5-43 (325)
266 1oi7_A Succinyl-COA synthetase 59.8 16 0.00056 30.7 6.0 32 1-32 8-40 (288)
267 3ko8_A NAD-dependent epimerase 59.4 12 0.0004 31.1 5.0 31 1-31 1-32 (312)
268 1dlj_A UDP-glucose dehydrogena 59.3 8 0.00027 34.3 4.1 29 1-30 1-29 (402)
269 3st7_A Capsular polysaccharide 59.2 6.7 0.00023 33.8 3.5 28 1-28 1-30 (369)
270 3g17_A Similar to 2-dehydropan 59.1 7.4 0.00025 32.7 3.7 30 1-30 3-32 (294)
271 2g5c_A Prephenate dehydrogenas 59.1 11 0.00039 31.0 4.8 24 1-24 2-25 (281)
272 2yjn_A ERYCIII, glycosyltransf 58.3 20 0.0007 31.5 6.6 47 1-61 21-72 (441)
273 3bfp_A Acetyltransferase; LEFT 58.1 9.3 0.00032 30.0 3.9 30 2-31 5-34 (194)
274 3sc6_A DTDP-4-dehydrorhamnose 57.7 4.9 0.00017 33.1 2.2 30 1-30 6-36 (287)
275 4ea9_A Perosamine N-acetyltran 57.6 13 0.00045 29.6 4.8 30 2-31 14-43 (220)
276 3hn2_A 2-dehydropantoate 2-red 57.2 9.7 0.00033 32.2 4.1 29 1-29 3-31 (312)
277 1a5z_A L-lactate dehydrogenase 57.1 9.6 0.00033 32.6 4.1 29 1-29 1-31 (319)
278 2qyt_A 2-dehydropantoate 2-red 57.1 6.6 0.00023 33.0 3.0 28 1-28 9-42 (317)
279 2pk3_A GDP-6-deoxy-D-LYXO-4-he 57.1 29 0.00098 28.8 7.1 68 1-93 13-81 (321)
280 3abi_A Putative uncharacterize 56.9 39 0.0013 29.1 8.1 26 1-27 17-42 (365)
281 3cz5_A Two-component response 56.8 51 0.0017 23.6 7.8 31 1-31 6-38 (153)
282 1ff9_A Saccharopine reductase; 56.7 16 0.00053 33.0 5.6 30 1-31 4-33 (450)
283 2cvz_A Dehydrogenase, 3-hydrox 56.5 10 0.00035 31.3 4.1 26 1-27 2-27 (289)
284 1gpj_A Glutamyl-tRNA reductase 56.5 24 0.0008 31.2 6.7 31 1-31 168-198 (404)
285 3ego_A Probable 2-dehydropanto 56.1 13 0.00044 31.5 4.7 28 1-29 3-30 (307)
286 2wja_A Putative acid phosphata 55.9 27 0.00094 26.9 6.2 73 1-93 27-106 (168)
287 3ggo_A Prephenate dehydrogenas 55.9 13 0.00045 31.7 4.7 27 1-27 34-62 (314)
288 2bka_A CC3, TAT-interacting pr 55.7 15 0.00051 29.2 4.9 33 1-33 19-54 (242)
289 2gn4_A FLAA1 protein, UDP-GLCN 55.6 20 0.00068 30.6 5.9 29 1-29 22-53 (344)
290 2dph_A Formaldehyde dismutase; 55.5 22 0.00076 31.0 6.3 48 2-62 188-236 (398)
291 1lld_A L-lactate dehydrogenase 55.4 14 0.00047 31.2 4.8 29 1-29 8-38 (319)
292 3do5_A HOM, homoserine dehydro 55.4 17 0.00057 31.4 5.3 32 1-32 3-43 (327)
293 1evy_A Glycerol-3-phosphate de 54.9 6.7 0.00023 34.0 2.7 27 2-28 17-43 (366)
294 1cyd_A Carbonyl reductase; sho 54.7 38 0.0013 26.8 7.2 73 1-93 8-83 (244)
295 3n8i_A Low molecular weight ph 54.6 47 0.0016 25.1 7.3 58 1-59 6-70 (157)
296 4f3y_A DHPR, dihydrodipicolina 54.4 9.5 0.00033 32.0 3.5 33 1-33 8-42 (272)
297 3o8q_A Shikimate 5-dehydrogena 54.2 27 0.00092 29.3 6.3 31 2-32 128-158 (281)
298 3pp8_A Glyoxylate/hydroxypyruv 54.1 65 0.0022 27.4 8.9 87 1-93 140-227 (315)
299 1omo_A Alanine dehydrogenase; 54.0 35 0.0012 29.0 7.2 32 1-32 126-158 (322)
300 2d5c_A AROE, shikimate 5-dehyd 54.0 27 0.00094 28.5 6.3 28 2-30 118-145 (263)
301 3g79_A NDP-N-acetyl-D-galactos 54.0 12 0.00041 34.2 4.3 34 1-34 19-54 (478)
302 3pid_A UDP-glucose 6-dehydroge 53.9 13 0.00046 33.4 4.6 29 1-30 37-65 (432)
303 1hyh_A L-hicdh, L-2-hydroxyiso 53.8 12 0.0004 31.7 4.0 29 1-29 2-32 (309)
304 3bbn_B Ribosomal protein S2; s 53.5 42 0.0014 27.4 7.1 40 12-60 53-92 (231)
305 1f06_A MESO-diaminopimelate D- 53.4 10 0.00035 32.4 3.6 32 1-32 4-36 (320)
306 2g6t_A Uncharacterized protein 53.2 38 0.0013 28.7 6.9 50 2-66 3-56 (306)
307 3t38_A Arsenate reductase; low 53.2 86 0.003 25.1 12.4 72 1-93 82-160 (213)
308 4gx0_A TRKA domain protein; me 53.1 22 0.00074 32.7 6.1 34 1-34 349-382 (565)
309 3kwm_A Ribose-5-phosphate isom 52.9 28 0.00096 28.3 6.0 48 2-61 28-75 (224)
310 4gbj_A 6-phosphogluconate dehy 52.4 12 0.00042 31.6 4.0 26 2-27 7-32 (297)
311 2xdq_A Light-independent proto 52.4 16 0.00054 32.9 4.9 79 2-93 319-401 (460)
312 1v6s_A Phosphoglycerate kinase 52.2 42 0.0014 29.7 7.3 74 10-93 36-111 (390)
313 1f0y_A HCDH, L-3-hydroxyacyl-C 52.0 17 0.00058 30.4 4.8 29 1-29 16-44 (302)
314 1iir_A Glycosyltransferase GTF 51.9 39 0.0013 29.3 7.3 31 1-31 1-36 (415)
315 3gqv_A Enoyl reductase; medium 51.7 59 0.002 27.9 8.4 43 2-58 167-210 (371)
316 3okp_A GDP-mannose-dependent a 51.4 16 0.00056 30.9 4.7 82 1-93 5-93 (394)
317 3qvo_A NMRA family protein; st 51.0 10 0.00036 30.3 3.2 33 1-33 24-58 (236)
318 2zcu_A Uncharacterized oxidore 51.0 37 0.0013 27.4 6.7 30 2-31 1-33 (286)
319 1b7g_O Protein (glyceraldehyde 50.9 36 0.0012 29.4 6.7 51 1-62 2-53 (340)
320 3vps_A TUNA, NAD-dependent epi 50.9 21 0.0007 29.5 5.1 32 1-32 8-40 (321)
321 2pv7_A T-protein [includes: ch 50.6 18 0.0006 30.4 4.7 29 1-29 22-51 (298)
322 4etn_A LMPTP, low molecular we 50.4 88 0.003 24.4 10.6 74 1-93 35-117 (184)
323 3s2u_A UDP-N-acetylglucosamine 50.4 21 0.00073 30.7 5.3 80 2-93 4-99 (365)
324 2p4q_A 6-phosphogluconate dehy 50.3 25 0.00087 32.1 6.0 27 1-27 11-37 (497)
325 3jvi_A Protein tyrosine phosph 50.0 75 0.0026 24.0 7.8 55 1-59 5-69 (161)
326 3oy2_A Glycosyltransferase B73 49.8 18 0.00062 31.1 4.8 78 1-93 1-88 (413)
327 3f6c_A Positive transcription 49.7 47 0.0016 23.0 6.4 76 1-93 2-79 (134)
328 3hzh_A Chemotaxis response reg 49.7 55 0.0019 23.7 6.9 20 1-20 37-56 (157)
329 1e3i_A Alcohol dehydrogenase, 49.6 41 0.0014 28.9 7.1 44 2-58 198-242 (376)
330 1rrv_A Glycosyltransferase GTF 49.6 28 0.00097 30.2 6.0 47 1-61 1-52 (416)
331 1p0f_A NADP-dependent alcohol 49.4 33 0.0011 29.5 6.4 44 2-58 194-238 (373)
332 2v6b_A L-LDH, L-lactate dehydr 49.2 20 0.00068 30.3 4.8 29 1-29 1-31 (304)
333 3cg0_A Response regulator rece 49.1 64 0.0022 22.4 7.5 27 1-27 10-37 (140)
334 3p7m_A Malate dehydrogenase; p 49.0 28 0.00096 29.8 5.7 28 1-28 6-34 (321)
335 2q1s_A Putative nucleotide sug 48.9 21 0.00072 30.6 5.0 31 1-31 33-65 (377)
336 3uog_A Alcohol dehydrogenase; 48.6 25 0.00086 30.2 5.5 45 2-59 192-236 (363)
337 2r85_A PURP protein PF1517; AT 48.3 19 0.00066 30.1 4.6 31 1-32 3-33 (334)
338 1y81_A Conserved hypothetical 48.2 21 0.00073 26.4 4.3 26 1-26 15-44 (138)
339 1r6d_A TDP-glucose-4,6-dehydra 48.1 20 0.0007 30.0 4.7 30 1-30 1-37 (337)
340 2q3e_A UDP-glucose 6-dehydroge 47.8 13 0.00045 33.5 3.6 29 1-29 6-36 (467)
341 3u9t_A MCC alpha, methylcroton 47.7 25 0.00086 33.4 5.7 61 2-62 30-106 (675)
342 2yjz_A Metalloreductase steap4 53.4 3.9 0.00013 32.6 0.0 27 1-27 20-46 (201)
343 2dpo_A L-gulonate 3-dehydrogen 47.6 24 0.00081 30.2 5.0 29 1-29 7-35 (319)
344 4a7p_A UDP-glucose dehydrogena 47.6 23 0.00078 31.9 5.1 34 1-34 9-42 (446)
345 1r0k_A 1-deoxy-D-xylulose 5-ph 47.5 45 0.0015 29.5 6.9 50 2-61 6-58 (388)
346 2ixd_A LMBE-related protein; h 47.4 60 0.002 26.5 7.3 89 1-93 4-104 (242)
347 2c29_D Dihydroflavonol 4-reduc 47.2 19 0.00066 30.2 4.4 32 1-32 6-38 (337)
348 1kol_A Formaldehyde dehydrogen 47.1 38 0.0013 29.4 6.5 48 2-62 188-236 (398)
349 3eag_A UDP-N-acetylmuramate:L- 46.9 84 0.0029 26.5 8.5 50 1-61 5-55 (326)
350 3b1f_A Putative prephenate deh 46.4 18 0.00062 29.9 4.0 26 1-26 7-34 (290)
351 2p6p_A Glycosyl transferase; X 46.4 58 0.002 27.6 7.5 47 1-61 1-52 (384)
352 3uko_A Alcohol dehydrogenase c 46.3 37 0.0013 29.3 6.2 45 2-59 196-241 (378)
353 3gaz_A Alcohol dehydrogenase s 46.3 25 0.00086 30.0 5.0 45 2-60 153-198 (343)
354 2c5a_A GDP-mannose-3', 5'-epim 46.2 30 0.001 29.7 5.6 32 1-32 30-62 (379)
355 2gqw_A Ferredoxin reductase; f 46.1 40 0.0014 29.4 6.4 60 2-62 147-207 (408)
356 3pdi_B Nitrogenase MOFE cofact 46.0 38 0.0013 30.6 6.3 32 2-33 315-346 (458)
357 2ggs_A 273AA long hypothetical 46.0 23 0.0008 28.5 4.6 30 1-31 1-31 (273)
358 4gmk_A Ribose-5-phosphate isom 45.9 41 0.0014 27.5 5.9 48 4-64 25-76 (228)
359 3bio_A Oxidoreductase, GFO/IDH 45.7 18 0.00063 30.5 4.0 32 1-32 10-42 (304)
360 4e12_A Diketoreductase; oxidor 45.6 25 0.00085 29.2 4.8 28 1-28 5-32 (283)
361 3ouz_A Biotin carboxylase; str 45.6 15 0.00051 32.7 3.6 33 2-34 8-40 (446)
362 1pl8_A Human sorbitol dehydrog 45.5 58 0.002 27.7 7.3 71 2-93 174-249 (356)
363 1uan_A Hypothetical protein TT 45.4 48 0.0016 26.7 6.3 88 1-93 2-102 (227)
364 1yj8_A Glycerol-3-phosphate de 45.4 14 0.00048 32.1 3.3 29 1-29 22-57 (375)
365 1pjq_A CYSG, siroheme synthase 45.4 70 0.0024 28.7 8.0 50 1-61 13-62 (457)
366 1x7d_A Ornithine cyclodeaminas 45.3 53 0.0018 28.4 7.0 31 1-31 130-161 (350)
367 3cnb_A DNA-binding response re 45.3 74 0.0025 22.1 7.8 31 1-31 9-41 (143)
368 3hbl_A Pyruvate carboxylase; T 45.2 23 0.0008 36.0 5.2 36 2-37 6-41 (1150)
369 3gv0_A Transcriptional regulat 45.1 1.2E+02 0.0041 24.4 9.1 87 5-93 106-195 (288)
370 2jhf_A Alcohol dehydrogenase E 45.0 54 0.0019 28.1 7.1 44 2-58 194-238 (374)
371 1cdo_A Alcohol dehydrogenase; 44.8 55 0.0019 28.1 7.1 44 2-58 195-239 (374)
372 1j5p_A Aspartate dehydrogenase 44.7 26 0.00091 29.0 4.7 28 1-31 13-40 (253)
373 3mtj_A Homoserine dehydrogenas 44.7 50 0.0017 29.7 6.9 32 1-32 11-52 (444)
374 3obb_A Probable 3-hydroxyisobu 44.5 21 0.0007 30.3 4.1 28 2-30 5-32 (300)
375 1kyq_A Met8P, siroheme biosynt 44.4 16 0.00056 30.7 3.4 30 1-31 14-43 (274)
376 1e6u_A GDP-fucose synthetase; 44.3 14 0.00049 30.7 3.1 29 1-29 4-33 (321)
377 3d3w_A L-xylulose reductase; u 44.3 78 0.0027 24.9 7.5 72 2-93 9-83 (244)
378 2xw6_A MGS, methylglyoxal synt 44.2 27 0.00093 26.0 4.2 103 1-124 4-126 (134)
379 2nu8_A Succinyl-COA ligase [AD 44.2 53 0.0018 27.5 6.7 32 1-32 8-40 (288)
380 1oju_A MDH, malate dehydrogena 44.0 21 0.00071 30.2 4.1 24 1-24 1-24 (294)
381 2ydy_A Methionine adenosyltran 43.8 27 0.00091 28.9 4.7 30 1-30 3-33 (315)
382 3k5i_A Phosphoribosyl-aminoimi 43.4 28 0.00095 30.6 4.9 36 2-38 26-61 (403)
383 3lp8_A Phosphoribosylamine-gly 43.3 13 0.00046 33.2 2.9 23 1-23 22-44 (442)
384 2eq6_A Pyruvate dehydrogenase 43.2 46 0.0016 29.6 6.5 59 2-61 171-229 (464)
385 2q7x_A UPF0052 protein SP_1565 43.2 28 0.00095 30.1 4.7 36 1-36 5-40 (326)
386 3rft_A Uronate dehydrogenase; 43.1 31 0.001 28.0 4.9 32 2-33 5-37 (267)
387 3beo_A UDP-N-acetylglucosamine 43.0 38 0.0013 28.4 5.7 83 1-93 9-102 (375)
388 1ebd_A E3BD, dihydrolipoamide 42.9 46 0.0016 29.4 6.4 59 2-61 172-230 (455)
389 2hun_A 336AA long hypothetical 42.5 22 0.00077 29.7 4.1 30 1-30 4-36 (336)
390 1uls_A Putative 3-oxoacyl-acyl 42.4 52 0.0018 26.3 6.2 72 2-93 7-84 (245)
391 1v59_A Dihydrolipoamide dehydr 42.4 49 0.0017 29.4 6.5 59 2-61 185-243 (478)
392 2p4h_X Vestitone reductase; NA 42.3 27 0.00094 28.9 4.6 30 1-30 2-32 (322)
393 2jae_A L-amino acid oxidase; o 42.3 57 0.002 28.9 7.0 38 1-39 12-49 (489)
394 1x0v_A GPD-C, GPDH-C, glycerol 42.3 12 0.00042 32.0 2.3 23 1-23 9-31 (354)
395 3nhm_A Response regulator; pro 42.1 81 0.0028 21.6 7.7 25 1-25 5-29 (133)
396 3c7a_A Octopine dehydrogenase; 41.9 17 0.00057 31.9 3.2 29 1-29 3-32 (404)
397 3d4o_A Dipicolinate synthase s 41.8 24 0.00082 29.5 4.1 27 1-27 6-32 (293)
398 2ewd_A Lactate dehydrogenase,; 41.8 23 0.0008 29.9 4.1 26 1-26 5-31 (317)
399 4hb9_A Similarities with proba 41.8 29 0.001 29.6 4.8 29 1-30 2-30 (412)
400 1xa0_A Putative NADPH dependen 41.8 59 0.002 27.2 6.7 44 2-58 152-196 (328)
401 3qwb_A Probable quinone oxidor 41.5 34 0.0012 28.9 5.1 45 2-59 151-196 (334)
402 3mjf_A Phosphoribosylamine--gl 41.4 43 0.0015 29.7 5.9 23 1-23 4-26 (431)
403 1vj0_A Alcohol dehydrogenase, 41.4 44 0.0015 28.9 5.9 45 2-59 198-243 (380)
404 2ehd_A Oxidoreductase, oxidore 41.1 49 0.0017 26.0 5.8 29 2-30 7-36 (234)
405 3mjd_A Orotate phosphoribosylt 40.9 31 0.0011 28.2 4.5 58 6-65 146-204 (232)
406 3l7o_A Ribose-5-phosphate isom 40.9 31 0.0011 28.1 4.5 47 3-62 21-71 (225)
407 2dzd_A Pyruvate carboxylase; b 40.7 16 0.00055 32.6 3.0 34 2-35 8-41 (461)
408 2o23_A HADH2 protein; HSD17B10 40.7 1.1E+02 0.0038 24.2 8.0 29 2-30 14-43 (265)
409 1ulz_A Pyruvate carboxylase N- 40.7 15 0.0005 32.7 2.7 33 2-34 4-36 (451)
410 1guz_A Malate dehydrogenase; o 40.6 32 0.0011 29.0 4.8 31 1-31 1-33 (310)
411 3q2o_A Phosphoribosylaminoimid 40.3 48 0.0016 28.7 6.0 35 2-36 16-50 (389)
412 1y1p_A ARII, aldehyde reductas 40.3 35 0.0012 28.4 5.0 31 1-31 12-43 (342)
413 3dk9_A Grase, GR, glutathione 40.3 55 0.0019 29.1 6.5 58 2-61 189-247 (478)
414 2o3j_A UDP-glucose 6-dehydroge 40.2 20 0.0007 32.5 3.6 29 1-29 10-40 (481)
415 4ffl_A PYLC; amino acid, biosy 40.1 47 0.0016 28.3 5.9 36 2-37 3-38 (363)
416 2yv3_A Aspartate-semialdehyde 40.0 15 0.00052 31.6 2.6 26 1-26 1-27 (331)
417 2pn1_A Carbamoylphosphate synt 40.0 34 0.0012 28.6 4.8 33 1-34 5-39 (331)
418 2p0y_A Hypothetical protein LP 39.9 27 0.00091 30.4 4.1 35 1-35 11-45 (341)
419 3aw8_A PURK, phosphoribosylami 39.9 29 0.001 29.7 4.5 32 2-33 1-32 (369)
420 2ozp_A N-acetyl-gamma-glutamyl 39.9 27 0.00091 30.2 4.2 32 1-32 5-38 (345)
421 1n2s_A DTDP-4-, DTDP-glucose o 39.8 23 0.00078 29.1 3.6 29 1-30 1-30 (299)
422 2egg_A AROE, shikimate 5-dehyd 39.7 64 0.0022 27.0 6.5 31 1-31 142-172 (297)
423 2cuk_A Glycerate dehydrogenase 39.7 97 0.0033 26.1 7.7 56 1-61 145-200 (311)
424 2b5w_A Glucose dehydrogenase; 39.5 90 0.0031 26.5 7.6 49 2-60 175-226 (357)
425 2pjm_A Ribose-5-phosphate isom 39.5 58 0.002 26.5 5.9 46 3-61 23-72 (226)
426 3iup_A Putative NADPH:quinone 39.4 41 0.0014 29.1 5.4 44 2-58 173-218 (379)
427 1tmy_A CHEY protein, TMY; chem 39.2 85 0.0029 21.0 6.9 30 1-30 3-33 (120)
428 1mld_A Malate dehydrogenase; o 39.1 29 0.001 29.5 4.3 29 1-29 1-32 (314)
429 3gms_A Putative NADPH:quinone 39.0 54 0.0018 27.7 6.0 44 2-58 147-191 (340)
430 3k4h_A Putative transcriptiona 39.0 1.3E+02 0.0045 24.0 8.3 83 5-93 110-199 (292)
431 2qv0_A Protein MRKE; structura 38.9 97 0.0033 21.6 7.4 31 1-31 10-42 (143)
432 2vn8_A Reticulon-4-interacting 38.9 1.2E+02 0.004 26.0 8.2 67 2-93 186-255 (375)
433 2fzw_A Alcohol dehydrogenase c 38.9 49 0.0017 28.4 5.8 44 2-58 193-237 (373)
434 2yv1_A Succinyl-COA ligase [AD 38.8 57 0.0019 27.4 6.0 63 1-93 14-77 (294)
435 2hjs_A USG-1 protein homolog; 38.8 20 0.00069 31.0 3.2 31 1-31 7-41 (340)
436 1onf_A GR, grase, glutathione 38.6 60 0.002 29.2 6.5 60 2-62 178-237 (500)
437 2b69_A UDP-glucuronate decarbo 38.5 46 0.0016 27.9 5.5 31 1-31 28-59 (343)
438 2yv2_A Succinyl-COA synthetase 38.5 78 0.0027 26.6 6.8 63 1-93 14-78 (297)
439 4eqs_A Coenzyme A disulfide re 38.4 76 0.0026 28.0 7.1 62 2-64 149-210 (437)
440 3ip1_A Alcohol dehydrogenase, 38.4 50 0.0017 28.8 5.8 45 2-59 216-261 (404)
441 3tsm_A IGPS, indole-3-glycerol 38.3 1.2E+02 0.004 25.3 7.8 87 15-114 84-171 (272)
442 3ka7_A Oxidoreductase; structu 38.3 43 0.0015 28.9 5.4 58 1-59 1-76 (425)
443 2rir_A Dipicolinate synthase, 38.2 29 0.001 29.0 4.1 27 1-27 8-34 (300)
444 1pzg_A LDH, lactate dehydrogen 38.2 29 0.00098 29.8 4.1 26 1-26 10-36 (331)
445 3n2l_A OPRT, oprtase, orotate 38.2 44 0.0015 27.4 5.0 57 6-65 152-209 (238)
446 4eye_A Probable oxidoreductase 38.1 53 0.0018 27.9 5.8 45 2-59 162-207 (342)
447 3afn_B Carbonyl reductase; alp 38.0 62 0.0021 25.6 6.0 29 2-30 9-38 (258)
448 1xyg_A Putative N-acetyl-gamma 37.9 29 0.001 30.2 4.1 32 1-32 17-50 (359)
449 1zcj_A Peroxisomal bifunctiona 37.8 35 0.0012 30.7 4.8 29 1-29 38-66 (463)
450 1zmd_A Dihydrolipoyl dehydroge 37.8 63 0.0021 28.7 6.5 59 2-61 180-239 (474)
451 1q1r_A Putidaredoxin reductase 37.6 53 0.0018 28.9 5.9 60 2-62 151-211 (431)
452 2yvq_A Carbamoyl-phosphate syn 37.5 61 0.0021 24.0 5.4 45 49-94 60-104 (143)
453 2yqu_A 2-oxoglutarate dehydrog 37.4 55 0.0019 28.9 6.0 60 2-62 169-228 (455)
454 1oc2_A DTDP-glucose 4,6-dehydr 37.3 32 0.0011 28.9 4.2 31 1-31 5-38 (348)
455 3urh_A Dihydrolipoyl dehydroge 37.2 51 0.0018 29.5 5.8 59 2-61 200-258 (491)
456 2duw_A Putative COA-binding pr 37.1 29 0.001 25.8 3.5 25 2-26 15-43 (145)
457 3lad_A Dihydrolipoamide dehydr 36.7 55 0.0019 29.1 5.9 59 2-61 182-240 (476)
458 2r9z_A Glutathione amide reduc 36.7 67 0.0023 28.5 6.5 59 2-62 168-227 (463)
459 2dbq_A Glyoxylate reductase; D 36.7 40 0.0014 28.8 4.8 29 1-29 151-179 (334)
460 3lxd_A FAD-dependent pyridine 36.5 75 0.0026 27.6 6.7 59 2-61 154-213 (415)
461 1smk_A Malate dehydrogenase, g 36.5 24 0.00083 30.2 3.3 29 1-29 9-40 (326)
462 2vdc_G Glutamate synthase [NAD 36.4 1.6E+02 0.0056 26.1 9.0 56 2-61 266-321 (456)
463 2a8x_A Dihydrolipoyl dehydroge 36.3 56 0.0019 28.9 5.9 60 2-62 173-232 (464)
464 2dkn_A 3-alpha-hydroxysteroid 36.1 55 0.0019 25.8 5.3 31 1-31 2-33 (255)
465 3va7_A KLLA0E08119P; carboxyla 36.0 43 0.0015 34.4 5.4 34 2-35 33-66 (1236)
466 3n3f_A Collagen alpha-1(XV) ch 36.0 35 0.0012 21.2 3.1 26 201-226 17-42 (54)
467 2hy5_A Putative sulfurtransfer 35.9 96 0.0033 22.3 6.2 31 1-31 1-39 (130)
468 3cty_A Thioredoxin reductase; 35.8 90 0.0031 25.6 6.8 53 2-61 157-209 (319)
469 2vdc_G Glutamate synthase [NAD 35.7 1E+02 0.0034 27.5 7.5 83 1-93 123-214 (456)
470 2o2z_A Hypothetical protein; s 35.7 29 0.00099 29.9 3.6 35 1-35 5-39 (323)
471 1uuf_A YAHK, zinc-type alcohol 35.7 75 0.0026 27.3 6.5 44 2-58 197-240 (369)
472 2x6t_A ADP-L-glycero-D-manno-h 35.4 48 0.0016 28.0 5.1 31 1-31 47-79 (357)
473 2vvp_A Ribose-5-phosphate isom 35.3 1.5E+02 0.005 22.7 7.2 23 71-93 46-68 (162)
474 2gcg_A Glyoxylate reductase/hy 35.3 50 0.0017 28.2 5.1 30 1-30 156-185 (330)
475 2d8a_A PH0655, probable L-thre 35.3 44 0.0015 28.4 4.8 44 2-58 170-214 (348)
476 1dih_A Dihydrodipicolinate red 35.1 16 0.00054 30.6 1.9 34 1-34 6-41 (273)
477 1vc4_A Indole-3-glycerol phosp 35.1 1.8E+02 0.0063 23.6 9.1 87 13-114 68-156 (254)
478 3fbg_A Putative arginate lyase 35.0 57 0.002 27.6 5.5 45 2-59 153-198 (346)
479 3hg7_A D-isomer specific 2-hyd 35.0 99 0.0034 26.4 7.0 61 1-61 141-201 (324)
480 1qpg_A PGK, 3-phosphoglycerate 34.9 1.8E+02 0.0062 25.8 8.7 75 11-93 41-117 (415)
481 3jvd_A Transcriptional regulat 34.8 28 0.00094 29.3 3.4 83 5-93 153-238 (333)
482 2hqr_A Putative transcriptiona 34.4 1.5E+02 0.0053 22.6 8.0 27 1-27 1-28 (223)
483 2xw6_A MGS, methylglyoxal synt 34.3 98 0.0033 22.9 5.9 48 13-62 63-111 (134)
484 1lu9_A Methylene tetrahydromet 34.3 94 0.0032 25.5 6.6 29 2-31 121-150 (287)
485 3hut_A Putative branched-chain 34.3 38 0.0013 28.4 4.2 75 11-93 126-201 (358)
486 3evt_A Phosphoglycerate dehydr 34.2 98 0.0034 26.4 6.8 61 1-61 138-198 (324)
487 3fr7_A Putative ketol-acid red 34.1 63 0.0021 29.7 5.7 47 1-59 55-107 (525)
488 2hrz_A AGR_C_4963P, nucleoside 34.0 34 0.0012 28.6 3.9 31 1-31 15-53 (342)
489 1iow_A DD-ligase, DDLB, D-ALA\ 34.0 43 0.0015 27.5 4.5 31 1-31 3-42 (306)
490 3fg2_P Putative rubredoxin red 34.0 75 0.0026 27.5 6.2 59 2-61 144-203 (404)
491 1ges_A Glutathione reductase; 33.8 65 0.0022 28.4 5.9 60 2-62 169-228 (450)
492 3k31_A Enoyl-(acyl-carrier-pro 33.8 88 0.003 25.8 6.4 28 2-29 32-62 (296)
493 2hqm_A GR, grase, glutathione 33.7 65 0.0022 28.7 5.9 60 2-62 187-246 (479)
494 1mkz_A Molybdenum cofactor bio 33.7 51 0.0018 25.3 4.5 79 27-108 13-94 (172)
495 1zmt_A Haloalcohol dehalogenas 33.7 38 0.0013 27.2 4.0 29 1-29 1-31 (254)
496 3ntd_A FAD-dependent pyridine 33.6 77 0.0026 28.7 6.5 59 2-61 153-211 (565)
497 1lvl_A Dihydrolipoamide dehydr 33.6 51 0.0018 29.2 5.2 60 2-62 173-232 (458)
498 2v3a_A Rubredoxin reductase; a 33.6 74 0.0025 27.2 6.1 60 2-62 147-207 (384)
499 2z04_A Phosphoribosylaminoimid 33.6 40 0.0014 28.8 4.3 31 2-32 3-33 (365)
500 3nep_X Malate dehydrogenase; h 33.5 39 0.0013 28.9 4.1 24 1-24 1-24 (314)
No 1
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=100.00 E-value=1.8e-62 Score=433.28 Aligned_cols=241 Identities=34% Similarity=0.551 Sum_probs=222.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+||||++||+++|++|++++|+|++|||+||++.|||+++.++||+++|+++|||++++.+++++ ++++
T Consensus 3 mrivf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~--------~~~~ 74 (314)
T 3tqq_A 3 LKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDE--------VEQE 74 (314)
T ss_dssp CEEEEEECSGGGHHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSH--------HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCH--------HHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999877 8999
Q ss_pred HHhcCCCcEEEEE-------------------------------------------------------------------
Q psy5230 81 LLNKIEFDIMIVM------------------------------------------------------------------- 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~------------------------------------------------------------------- 93 (258)
.|++++||++|++
T Consensus 75 ~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~ 154 (314)
T 3tqq_A 75 KLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHASLLPRWRGAAPIQRAILAGDRETGISIMQMNEGLDTGDVLAKSA 154 (314)
T ss_dssp HHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEEEESSCTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEE
T ss_pred HHHhcCCCEEEEcCcccccCHHHHhhCcCCEEEecCccccCCCCccHHHHHHHcCCCeeEEEEEeeecCCCCCCEEEEEE
Confidence 9999999999999
Q ss_pred -eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhcCCC
Q psy5230 94 -GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172 (258)
Q Consensus 94 -~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~~p~ 172 (258)
+|.++||+.+|++|++.++++++.++|+++.+ |.+.+.||++..+||+||++++|+.|||+++|++|+|+|||++||
T Consensus 155 ~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~--g~~~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~I~~~iRa~~P~ 232 (314)
T 3tqq_A 155 CVISSEDTAADLHDRLSLIGADLLLESLAKLEK--GDIKLEKQDEASATYASKIQKQEALIDWRKSAVEIARQVRAFNPT 232 (314)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH--TCCCCBCCCGGGCCBCCCCCGGGGBCCTTSBHHHHHHHHHHTTTT
T ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCCCcCcCCCccccCCCCCCHHHheecccCCHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeccCCCceEEEEEEEEccCCCCCCCcEEEEEeeCCcEEEEecCcEEEEEEEecCCCCccCHHHHhcccc--C
Q psy5230 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCI--K 250 (258)
Q Consensus 173 pga~~~~~~~~~~g~~i~i~~a~~~~~~~~~~pG~i~~~~~~~~l~V~c~dg~l~i~~lq~~gkk~~~a~~f~~g~~--~ 250 (258)
||||+++ + |++++|++++..+......||+|+..+ +++++|+|+||.|+|.++|++|||.|++.+|+||++ +
T Consensus 233 Pga~~~~---~--g~~~ki~~a~~~~~~~~~~pG~v~~~~-~~~l~V~~~dg~l~i~~lq~~gkk~m~~~~f~~g~~~~~ 306 (314)
T 3tqq_A 233 PIAFTYF---E--GQPMRIWRATVVDEKTDFEPGVLVDAD-KKGISIAAGSGILRLHQLQLPGKRVCSAGDFINAHGDKL 306 (314)
T ss_dssp TCCEEEE---T--TEEEEEEEEEEECCCCSSCTTCEEEEE-TTEEEEECSBSEEEEEEEECTTSCCEEHHHHHHHHGGGC
T ss_pred CceEEEE---C--CEEEEEEEEEEecCCCCCCCcEEEEec-CCEEEEEECCCEEEEeEEEcCCCCccCHHHHhccCcccC
Confidence 9999999 8 999999999987665567899999887 899999999999999999999999999999999999 9
Q ss_pred CCccccc
Q psy5230 251 NIKYFIS 257 (258)
Q Consensus 251 ~~g~~~~ 257 (258)
..|+.+.
T Consensus 307 ~~g~~~~ 313 (314)
T 3tqq_A 307 IPGKTVF 313 (314)
T ss_dssp CTTTCCC
T ss_pred CCCCEec
Confidence 9998763
No 2
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=100.00 E-value=2e-62 Score=433.14 Aligned_cols=241 Identities=26% Similarity=0.448 Sum_probs=231.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+||||++||+++|++|++++|+|++|||+||++.|||+++.++||+++|+++|||++++++++++ ++++
T Consensus 5 mrIvf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~~~~--------~~~~ 76 (317)
T 3rfo_A 5 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRIREK--------DEYE 76 (317)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCTTSH--------HHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccCCCH--------HHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999998877 8899
Q ss_pred HHhcCCCcEEEEE-------------------------------------------------------------------
Q psy5230 81 LLNKIEFDIMIVM------------------------------------------------------------------- 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~------------------------------------------------------------------- 93 (258)
.|++++||++|++
T Consensus 77 ~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~DtG~Ii~q~~ 156 (317)
T 3rfo_A 77 KVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVE 156 (317)
T ss_dssp HHHHHCCSEEEESSCCSCCCHHHHHSSTTCEEEEESSCTTSSBSSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEE
T ss_pred HHHhcCCCEEEEcCchhhCCHHHHhhCcCCEEEECCccCcCCCCcCHHHHHHHcCCCceEEEEEEEcccCCCCCEEEEEE
Confidence 9999999999998
Q ss_pred -eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhcCCC
Q psy5230 94 -GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172 (258)
Q Consensus 94 -~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~~p~ 172 (258)
+|.++||+.+|++|++.++++++.++|+++.. |++++.||++..+||+||++++|+.|||+++|++|+|+|||++||
T Consensus 157 ~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~--g~~~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~i~~~iRa~~p~ 234 (317)
T 3rfo_A 157 VEIEERETTGSLFDKLSEAGAHLLSKTVPLLIQ--GKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPW 234 (317)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCBCCCGGGCCBCCCCCHHHHBCCTTSCHHHHHHHHHHTTTT
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCccccCCCCcceECCCCCHHHcccCHHHhHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeccCCCceEEEEEEEEccCCCCCCCcEEEEEeeCCcEEEEecCcE-EEEEEEecCCCCccCHHHHhccccCC
Q psy5230 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNV-IKLLELQKNNKKKISATEFINGCIKN 251 (258)
Q Consensus 173 pga~~~~~~~~~~g~~i~i~~a~~~~~~~~~~pG~i~~~~~~~~l~V~c~dg~-l~i~~lq~~gkk~~~a~~f~~g~~~~ 251 (258)
||||+++ + |++++||+++..+......||+|+..+ +++++|+|+||. |+|.++|++|||.|++.+|+||++++
T Consensus 235 Pga~~~~---~--g~~~ki~~a~~~~~~~~~~pG~i~~~~-~~~l~V~~~dg~~l~i~~lq~~gkk~m~a~~f~~g~~~~ 308 (317)
T 3rfo_A 235 PVAYTTL---A--GQVVKVWWGEKVPVTKSAEAGTIVAIE-EDGFVVATGNETGVKITELQPSGKKRMSCSQFLRGTKPE 308 (317)
T ss_dssp TCCEEEE---T--TEEEEEEEEEEEECSSCCCTTBEEEEC-SSCEEECCSSSEEEEEEEEEETTSCCEEHHHHHHHCCCC
T ss_pred CceEEEE---C--CeEEEEEEEEEecCCCCCCCcEEEEec-CCeEEEEeCCCCEEEEEEEEcCCCCccCHHHHhccCCCC
Confidence 9999999 8 999999999987655557899999888 789999999998 99999999999999999999999999
Q ss_pred Cccccc
Q psy5230 252 IKYFIS 257 (258)
Q Consensus 252 ~g~~~~ 257 (258)
.|+.++
T Consensus 309 ~g~~~~ 314 (317)
T 3rfo_A 309 IGTKLG 314 (317)
T ss_dssp TTCBCC
T ss_pred CCCCCC
Confidence 999875
No 3
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=100.00 E-value=6.1e-62 Score=430.26 Aligned_cols=241 Identities=33% Similarity=0.521 Sum_probs=223.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+||||++||+++|++|++++|+|++|||+||++.|||+++.++||+++|+++|||++++.+++++ ++++
T Consensus 8 mrivf~Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~--------~~~~ 79 (318)
T 3q0i_A 8 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSD--------ESKQ 79 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSH--------HHHH
T ss_pred CEEEEEecCHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCH--------HHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999998876 8999
Q ss_pred HHhcCCCcEEEEE-------------------------------------------------------------------
Q psy5230 81 LLNKIEFDIMIVM------------------------------------------------------------------- 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~------------------------------------------------------------------- 93 (258)
.|++++||++|++
T Consensus 80 ~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~ 159 (318)
T 3q0i_A 80 QLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIAT 159 (318)
T ss_dssp HHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEE
T ss_pred HHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCCccCcCCCCcCHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEEE
Confidence 9999999999998
Q ss_pred -eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhcCCC
Q psy5230 94 -GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172 (258)
Q Consensus 94 -~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~~p~ 172 (258)
+|.++||+.+|++|++.++++++.++|+++.. |.+++.||++..+||+||++++|+.|||+++|++|+|+|||++||
T Consensus 160 ~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~--g~~~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~I~~~iRa~~P~ 237 (318)
T 3q0i_A 160 LPIEASDTSASMYDKLAELGPQALLECLQDIAQ--GTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPW 237 (318)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH--TCCCCBCCCGGGCCBCCCCCHHHHBCCTTSBHHHHHHHHHHTTTT
T ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCCCCCCEECCCCCHHHceeccCCCHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeccCCCceEEEEEEEEccCCCCCCCcEEEEEeeCCcEEEEecCcEEEEEEEecCCCCccCHHHHhcccc--C
Q psy5230 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCI--K 250 (258)
Q Consensus 173 pga~~~~~~~~~~g~~i~i~~a~~~~~~~~~~pG~i~~~~~~~~l~V~c~dg~l~i~~lq~~gkk~~~a~~f~~g~~--~ 250 (258)
||||+++ + |++++|++++..+......||+|+..+ +++++|+|+||.|+|.++|++|||.|++.+|+||++ +
T Consensus 238 Pga~~~~---~--g~~~ki~~a~~~~~~~~~~pG~i~~~~-~~~~~V~~~dg~l~i~~lq~~gkk~m~a~~f~~g~~~~~ 311 (318)
T 3q0i_A 238 PMSHFEV---A--ENSIKVWQARVETRAVTQTPGTIIQAD-KSGIYVATGQDVLVLESLQIPGKKALPVQDILNARADWF 311 (318)
T ss_dssp TCCEEEE---T--TEEEEEEEEEEECCCCCSCTTBEEEEE-TTEEEEECSBSEEEEEEEECTTSCCEEHHHHHHHHTTTT
T ss_pred CceEEEE---C--CEEEEEEEEEEecCCCCCCCcEEEEEc-CCEEEEEECCcEEEEEEEEcCCCCcccHHHHhccCcccC
Confidence 9999999 8 999999999987765567899999887 899999999999999999999999999999999999 9
Q ss_pred CCccccc
Q psy5230 251 NIKYFIS 257 (258)
Q Consensus 251 ~~g~~~~ 257 (258)
..|+.++
T Consensus 312 ~~g~~~~ 318 (318)
T 3q0i_A 312 SVGSQLS 318 (318)
T ss_dssp CTTCBCC
T ss_pred CCCCCcC
Confidence 9999875
No 4
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=100.00 E-value=3.4e-60 Score=418.94 Aligned_cols=240 Identities=38% Similarity=0.542 Sum_probs=223.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+||||++||.++|++|++++++|++|||+||++.|||+++.++|++++|+++|||++++++++++ ++++
T Consensus 4 mrIvf~Gt~~fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~--------~~~~ 75 (314)
T 1fmt_A 4 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQ--------ENQQ 75 (314)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSH--------HHHH
T ss_pred CEEEEEecCHHHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCCCCCH--------HHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999998876 8999
Q ss_pred HHhcCCCcEEEEE-------------------------------------------------------------------
Q psy5230 81 LLNKIEFDIMIVM------------------------------------------------------------------- 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~------------------------------------------------------------------- 93 (258)
.|++++||++|++
T Consensus 76 ~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~ 155 (314)
T 1fmt_A 76 LVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLS 155 (314)
T ss_dssp HHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEE
T ss_pred HHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCCcCcCCCCcCHHHHHHHcCCCceEEEEEEEcccCcCCCEEEEEE
Confidence 9999999999998
Q ss_pred -eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhcCCC
Q psy5230 94 -GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNPF 172 (258)
Q Consensus 94 -~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~~p~ 172 (258)
+|.++||+.+|++|++.++++++.++|+.+.. |.+.+.||++..+||+||++++|+.|||+++|++|+|+|||++||
T Consensus 156 ~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~--g~~~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~i~~~iRa~~p~ 233 (314)
T 1fmt_A 156 CPITAEDTSGTLYDKLAELGPQGLITTLKQLAD--GTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPW 233 (314)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH--TCCCCBCCCGGGCCBCCCCCHHHHBCCTTSBHHHHHHHHHHTTTT
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCCceecCCccccccCCCCCHHHhhhcccccHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeccCCCceEEEEEEEEccCCCCCCCcEEEEEeeCCcEEEEecCcEEEEEEEecCCCCccCHHHHhcccc--C
Q psy5230 173 PGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCI--K 250 (258)
Q Consensus 173 pga~~~~~~~~~~g~~i~i~~a~~~~~~~~~~pG~i~~~~~~~~l~V~c~dg~l~i~~lq~~gkk~~~a~~f~~g~~--~ 250 (258)
||||+++ + |++++|++++..+......||+|+..+ +++++|+|+||.|+|.++|++|||.|++.+|+||++ +
T Consensus 234 Pga~~~~---~--g~~~ki~~a~~~~~~~~~~pG~i~~~~-~~~~~V~~~dg~l~i~~~q~~gkk~m~a~~~~~g~~~~~ 307 (314)
T 1fmt_A 234 PMSWLEI---E--GQPVKVWKASVIDTATNAAPGTILEAN-KQGIQVATGDGILNLLSLQPAGKKAMSAQDLLNSRREWF 307 (314)
T ss_dssp TCEEEEE---T--TEEEEEEEEEEECCCCCSCTTBEEEEE-TTEEEEECSBSEEEEEEEEETTSCCEEHHHHHHHSGGGS
T ss_pred CceEEEE---C--CEEEEEEEEEEccCCCCCCCceEEEec-CCEEEEEeCCCEEEEEEEEcCCCCCCCHHHHhccCCccC
Confidence 9999999 8 999999999987644345899999877 789999999999999999999999999999999999 8
Q ss_pred CCcccc
Q psy5230 251 NIKYFI 256 (258)
Q Consensus 251 ~~g~~~ 256 (258)
..|+.+
T Consensus 308 ~~g~~~ 313 (314)
T 1fmt_A 308 VPGNRL 313 (314)
T ss_dssp CTTCBC
T ss_pred CCCCEe
Confidence 999875
No 5
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=100.00 E-value=9.4e-57 Score=395.70 Aligned_cols=236 Identities=18% Similarity=0.315 Sum_probs=217.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+||||++||.++|++|++++++|++|||+||++.| ++.+++++++|+++|||++++++.+++ ++++
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g---~~~~~~v~~~A~~~gIpv~~~~~~~~~--------~~~~ 69 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGE---KAFYGSVARLAAERGIPVYAPDNVNHP--------LWVE 69 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC---------CCCCHHHHHHHHTCCEECCSCCCSH--------HHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHCCCcEEEEEcCCCCCCC---CcCccHHHHHHHHcCCCEECCCcCCcH--------HHHH
Confidence 99999999999999999999999999999999999887 678899999999999999999998776 8999
Q ss_pred HHhcCCCcEEEEE-------------------------------------------------------------------
Q psy5230 81 LLNKIEFDIMIVM------------------------------------------------------------------- 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~------------------------------------------------------------------- 93 (258)
.|++++||++|++
T Consensus 70 ~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~ 149 (305)
T 2bln_A 70 RIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLR 149 (305)
T ss_dssp HHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEE
T ss_pred HHHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCCcCcCCCCccHHHHHHHcCCCcEEEEEEEECCCccCCCeEEEEE
Confidence 9999999999998
Q ss_pred -eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhcC-C
Q psy5230 94 -GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFN-P 171 (258)
Q Consensus 94 -~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~~-p 171 (258)
+|.++||+.+|++|++.++++++.++|+.+.. |.+.+.||++..+||+||++++|+.|||+++|++|+|+|||++ |
T Consensus 150 ~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~--g~~~~~~Q~~~~~tya~k~~~~d~~Idw~~~a~~i~~~iRa~~~p 227 (305)
T 2bln_A 150 IAIAPDDIAITLHHKLCHAARQLLEQTLPAIKH--GNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADP 227 (305)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCBCCCGGGCCEECCCCGGGGBCCTTSBHHHHHHHHHHTCTT
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCCceecCCccccccCCCCCHHHcEECCcCCHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999 9999999999999999999999999999999999999999996 9
Q ss_pred CCceEEEEEeccCCCceEEEEEEEEccCCCCCCCcEEEEEeeCCcEEEEecCcEEEEEEEecCCCCccCHHHHhccccCC
Q psy5230 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKN 251 (258)
Q Consensus 172 ~pga~~~~~~~~~~g~~i~i~~a~~~~~~~~~~pG~i~~~~~~~~l~V~c~dg~l~i~~lq~~gkk~~~a~~f~~g~~~~ 251 (258)
|||||+++ + |++++|++++..+......||+|+..+ .++|+|+||.|+|.++|++|||.|++.+|+||+++.
T Consensus 228 ~Pga~~~~---~--g~~~ki~~a~~~~~~~~~~pG~i~~~~---~~~V~~~dg~l~i~~~q~~gkk~m~~~~~~~g~~~~ 299 (305)
T 2bln_A 228 WPGAFSYV---G--NQKFTVWSSRVHPHASKAQPGSVISVA---PLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLV 299 (305)
T ss_dssp SCCEEEEE---T--TEEEEEEEEEEECSCCCSCTTBEEEET---TEEEECSBSEEEEEEEEETTSCCEEHHHHHHHHTCC
T ss_pred CCceEEEE---C--CEEEEEEEEEEccCCCCCCCCEEEEEC---CEEEEeCCceEEEEEEecCCCceecHHHHHhcCCCC
Confidence 99999999 8 999999999987654456899998653 399999999999999999999999999999999999
Q ss_pred Cccccc
Q psy5230 252 IKYFIS 257 (258)
Q Consensus 252 ~g~~~~ 257 (258)
.|+.++
T Consensus 300 ~g~~~~ 305 (305)
T 2bln_A 300 QGSRLN 305 (305)
T ss_dssp TTCBCC
T ss_pred CCCCCC
Confidence 998864
No 6
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=100.00 E-value=4.5e-51 Score=362.83 Aligned_cols=226 Identities=22% Similarity=0.339 Sum_probs=205.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+|||+++|++++|++|++.+++|++|||+||++ +| +++++++|+++|||+++++++++..++ ..++++
T Consensus 23 mrIvf~G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~-~~-----~~~v~~~A~~~gIpv~~~~~~~~~~~~---~~~~~~ 93 (329)
T 2bw0_A 23 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKD-GK-----ADPLGLEAEKDGVPVFKYSRWRAKGQA---LPDVVA 93 (329)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEEECCCCS-SC-----CCHHHHHHHHHTCCEEECSCCEETTEE---CHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEEeCCCcC-CC-----CCHHHHHHHHcCCCEEecCcccccccc---cHHHHH
Confidence 899999999999999999999999999999999986 32 679999999999999999877541111 128899
Q ss_pred HHhcCCCcEEEEE-------------------------------------------------------------------
Q psy5230 81 LLNKIEFDIMIVM------------------------------------------------------------------- 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~------------------------------------------------------------------- 93 (258)
.|++++||++|++
T Consensus 94 ~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~Ai~~G~~~tGvTvh~~~~~lDtG~Ii~Q~~ 173 (329)
T 2bw0_A 94 KYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKE 173 (329)
T ss_dssp HHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEEEEE
T ss_pred HHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCcCcCCCCcCHHHHHHHcCCCcEEEEEEEECCcCcCCCEEEEEE
Confidence 9999999999998
Q ss_pred -eeCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhcCC
Q psy5230 94 -GILPEDTSLTLQNK-LEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFNP 171 (258)
Q Consensus 94 -~I~~~dt~~~L~~k-l~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~~p 171 (258)
+|.++||..+|++| ++.++++++.++|+.+.. |.+++.||++..+||+||++++|+.|||+++|++|+|+|||++|
T Consensus 174 v~I~~~dt~~~L~~r~l~~~~~~ll~~~l~~l~~--g~~~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~I~~~iRa~~p 251 (329)
T 2bw0_A 174 CEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAE--GKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDK 251 (329)
T ss_dssp EECCTTCCHHHHHHHTTTHHHHHHHHHHHHHHHH--TCCCCBCCCSTTCCBCCCCCGGGGBCCCSSCHHHHHHHHHTTTT
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCCcccCCccccccccCCCHHHcEEcccCCHHHHHHHHhccCC
Confidence 99999999999999 689999999999999999 99999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEeccCCCceEEEEEEEEccCCC-----------CCCCcEEEEEeeCCcEEEEecCc-EEEEEEEecCCCCcc
Q psy5230 172 FPGAKTYYISYQNKKKFLKIWKAHALSIES-----------TKKPGTILNVNFHNGILVVCGKN-VIKLLELQKNNKKKI 239 (258)
Q Consensus 172 ~pga~~~~~~~~~~g~~i~i~~a~~~~~~~-----------~~~pG~i~~~~~~~~l~V~c~dg-~l~i~~lq~~gkk~~ 239 (258)
|||||+++ + |++++|+++++.+... ...||+| . +++++|+|+|| +|+|.++|++|||.|
T Consensus 252 ~Pga~t~~---~--g~~~ki~~a~~~~~~~~~~g~~~~~~~~~~pG~i---~-~~~~~V~~~dg~~l~i~~lq~~gkk~m 322 (329)
T 2bw0_A 252 VPGAWTEA---C--EQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVV---T-KAGLILFGNDDKMLLVKNIQLEDGKMI 322 (329)
T ss_dssp TTCCEEEE---T--TEEEEEEEEESCCTTCCCCSEEECCTTCSSCEEE---E-TTEEEEECTTSCEEEEEEEECTTSCEE
T ss_pred CCceEEEE---C--CEEEEEEEEEEecccccccccccccccCCCCeEE---E-CCeEEEEeCCCCEEEEeEEECCCCCcC
Confidence 99999999 8 9999999998754321 2479998 3 78899999999 799999999999999
Q ss_pred CHHHHhc
Q psy5230 240 SATEFIN 246 (258)
Q Consensus 240 ~a~~f~~ 246 (258)
+|.+|++
T Consensus 323 ~a~~~~~ 329 (329)
T 2bw0_A 323 LASNFFK 329 (329)
T ss_dssp EGGGTTC
T ss_pred CHHHHhC
Confidence 9999975
No 7
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=6.5e-49 Score=379.32 Aligned_cols=235 Identities=18% Similarity=0.316 Sum_probs=214.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+||||++||.++|++|++++++|++|||+||++.| ++.+++++++|+++|||++++++.+++ ++++
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~~~~i~~v~t~~~~~~~---~~~~~~~~~~a~~~~ip~~~~~~~~~~--------~~~~ 69 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGE---KAFYGSVARLAAERGIPVYAPDNVNHP--------LWVE 69 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC-----------CCHHHHHHHHTCCEECCSCTTSH--------HHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhCCCCEEEEEeCCCCCcc---CcCccHHHHHHHHcCCCEeccCCCCcH--------HHHH
Confidence 89999999999999999999999999999999998875 678899999999999999999988766 8899
Q ss_pred HHhcCCCcEEEEE-------------------------------------------------------------------
Q psy5230 81 LLNKIEFDIMIVM------------------------------------------------------------------- 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~------------------------------------------------------------------- 93 (258)
.|++++||++|++
T Consensus 70 ~l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~slLP~~rG~~p~~~ai~~g~~~~G~t~~~~~~~~D~G~ii~q~~ 149 (660)
T 1z7e_A 70 RIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLR 149 (660)
T ss_dssp HHHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECCSSTTTSCEEEEEE
T ss_pred HHHhcCCCEEEEcCcccccCHHHHhcCCCCeEEecCCcCCCCCCccHHHHHHHcCCCcEEEEEEEECCCccCCCeeEEEE
Confidence 9999999999998
Q ss_pred -eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhcC-C
Q psy5230 94 -GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFN-P 171 (258)
Q Consensus 94 -~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~~-p 171 (258)
+|.++||..+|++|+..++++++.++|+.+.. |.+.+.||++..+||+||++++|+.|||+++|++|+|+|||++ |
T Consensus 150 ~~i~~~dt~~~l~~~~~~~~~~~~~~~l~~~~~--~~~~~~~q~~~~~~~~~~~~~~~~~idw~~~a~~i~~~ira~~~p 227 (660)
T 1z7e_A 150 IAIAPDDIAITLHHKLCHAARQLLEQTLPAIKH--GNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADP 227 (660)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTT--TCCCCBCCCGGGCCCCCCCCGGGGBCCTTSBHHHHHHHHHHTCTT
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCCceeeCCCccCccCCCCCHHHcEeCCCCCHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999 9999999999999999999999999999999999999999996 9
Q ss_pred CCceEEEEEeccCCCceEEEEEEEEccCCCCCCCcEEEEEeeCCcEEEEecCcEEEEEEEecCCCCccCHHHHhccccCC
Q psy5230 172 FPGAKTYYISYQNKKKFLKIWKAHALSIESTKKPGTILNVNFHNGILVVCGKNVIKLLELQKNNKKKISATEFINGCIKN 251 (258)
Q Consensus 172 ~pga~~~~~~~~~~g~~i~i~~a~~~~~~~~~~pG~i~~~~~~~~l~V~c~dg~l~i~~lq~~gkk~~~a~~f~~g~~~~ 251 (258)
|||||+++ + |++++|+++++.+......||+|+..+ . ++|+|+||+|+|.++|++|||.|++.+|++|.++.
T Consensus 228 ~p~a~~~~---~--~~~~~i~~~~~~~~~~~~~pG~i~~~~--~-~~v~~~~g~~~i~~~q~~g~~~m~a~d~l~g~~l~ 299 (660)
T 1z7e_A 228 WPGAFSYV---G--NQKFTVWSSRVHPHASKAQPGSVISVA--P-LLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLV 299 (660)
T ss_dssp SCCEEEEE---T--TEEEEEEECCEECCCCSSCTTSEEEET--T-EEEECSBSEEEECEEEETTSCCEEHHHHHHTTTCS
T ss_pred CCceEEEE---C--CEEEEEEEEEEccccCCCCCcEEEecC--c-EEEEeCCCeEEEEEeccCCCCcccHHHHHhhcCCC
Confidence 99999999 8 999999999887644346899998643 3 99999999999999999999999999999999988
Q ss_pred Ccccc
Q psy5230 252 IKYFI 256 (258)
Q Consensus 252 ~g~~~ 256 (258)
.|..+
T Consensus 300 ~g~~l 304 (660)
T 1z7e_A 300 QGSRL 304 (660)
T ss_dssp SSCCC
T ss_pred CCccc
Confidence 88765
No 8
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=99.90 E-value=2.8e-23 Score=177.44 Aligned_cols=90 Identities=14% Similarity=0.081 Sum_probs=82.3
Q ss_pred eeCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhcC--
Q psy5230 94 GILPEDTSLTLQNKLEKLSK-ILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAFN-- 170 (258)
Q Consensus 94 ~I~~~dt~~~L~~kl~~~g~-~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~~-- 170 (258)
+|. ||..+|++|++.+++ +++.++ .. |++++.||+ ..+||+||++++|+.|||+++|++|+|+|||++
T Consensus 151 ~I~--dt~~~L~~rl~~~~~~~ll~~~----~~--g~~~~~pQ~-~~~ty~~k~~k~d~~Idw~~~a~~I~~~IRa~~~~ 221 (260)
T 1zgh_A 151 DLY--GTAEEIFMRASKIIFNDMIPEL----LT--KRPVPQKQE-GEATVFQRRKPEQSEISPDFDLEKIYDYIRMLDGE 221 (260)
T ss_dssp ECC--SCHHHHHHHHHHHHHHTHHHHH----HH--HCCCCBCCC-SCCCEECCCCGGGGBCCTTSCHHHHHHHHHHTCST
T ss_pred ecc--CCHHHHHHHHHHHHHHHHHHHH----Hc--CCCcceeCC-CCceeeecCCHHHcEECcccCHHHHHHHHHhhCCC
Confidence 777 899999999999999 886554 45 778999999 678999999999999999999999999999997
Q ss_pred CCCceEEEEEeccCCCceEEEEEEEEc
Q psy5230 171 PFPGAKTYYISYQNKKKFLKIWKAHAL 197 (258)
Q Consensus 171 p~pga~~~~~~~~~~g~~i~i~~a~~~ 197 (258)
||||||+++ + |++++|+++++.
T Consensus 222 p~PgA~t~~---~--g~~~ki~~a~~~ 243 (260)
T 1zgh_A 222 GYPRAFIKY---G--KYRLEFSRASMK 243 (260)
T ss_dssp TCCCCEEEE---T--TEEEEEEEEEEE
T ss_pred CCCcEEEEE---C--CEEEEEEEEEEc
Confidence 999999999 8 999999999874
No 9
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=99.76 E-value=5.9e-18 Score=141.59 Aligned_cols=136 Identities=16% Similarity=0.249 Sum_probs=112.6
Q ss_pred CeEEEE--cCCHHHHHHHHHHHhCCC--cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc--cCCCCCCcccccc
Q psy5230 1 MKIIFA--GTSISAAAILDTLYNSEH--NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ--PISLKLNGKYHKI 74 (258)
Q Consensus 1 mrI~f~--Gs~~fa~~~L~~L~~~~~--~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~--~~~~~~~~~~~~~ 74 (258)
|||+|| |+++++.++|++|.+.++ +|++|+|++++. .++++|+++|||++. +.++++..+|
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~----------~~~~~A~~~gIp~~~~~~~~~~~r~~~--- 68 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKA----------YAIERCKKHNVECKVIQRKEFPSKKEF--- 68 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTC----------HHHHHHHHHTCCEEECCGGGSSSHHHH---
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCh----------HHHHHHHHcCCCEEEeCcccccchhhh---
Confidence 499999 999999999999998776 899999987542 478999999999985 5555541111
Q ss_pred hHHHHHHHhcCCCcEEEEE-------------------------------------------------------------
Q psy5230 75 ANETHKLLNKIEFDIMIVM------------------------------------------------------------- 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------- 93 (258)
..++++.|+++++|++|++
T Consensus 69 ~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~ 148 (216)
T 2ywr_A 69 EERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVEFGVKFSGCTVHIVDESVDAGP 148 (216)
T ss_dssp HHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSCTTTTCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSC
T ss_pred hHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCcCcCCCCccHHHHHHHcCCCeEEEEEEEEcccCCCCC
Confidence 1178899999999999998
Q ss_pred -------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCC--CCCCcCCCCCcccc
Q psy5230 94 -------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSN--IGESYAPLIKKNEA 151 (258)
Q Consensus 94 -------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~--~~atya~k~~~~d~ 151 (258)
+|.++||..+|++|+..++.+++.++|+.+.+ |.+....|.- ...+|++..+++|-
T Consensus 149 Ii~q~~~~i~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~--g~~~~~~~~~~~~~~~y~~~P~~~~l 213 (216)
T 2ywr_A 149 VIVQAVVPVLPEDDENTLADRILKWEHKILPQTVQWFAQ--DRIIIDGRKVIVKDATYGTLPVNPAL 213 (216)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCEEEETTEEEETTCCCSCSSEESCC
T ss_pred EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCCeecCCeeEEeCCCCCCCCChHHh
Confidence 99999999999999999999999999999999 8776555531 35789998887764
No 10
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=99.70 E-value=6.8e-17 Score=134.74 Aligned_cols=133 Identities=13% Similarity=0.177 Sum_probs=93.5
Q ss_pred eE--EEEcCCHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc--cCCCCCCcccccch
Q psy5230 2 KI--IFAGTSISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ--PISLKLNGKYHKIA 75 (258)
Q Consensus 2 rI--~f~Gs~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~--~~~~~~~~~~~~~~ 75 (258)
|| +|+|+++++.++|++|.+. +++|++|+|+++. .+++++|+++|||++. +.++++..+| .
T Consensus 5 ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~----------~~v~~~A~~~gIp~~~~~~~~~~~~~~~---~ 71 (212)
T 3av3_A 5 RLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPG----------AKVIERAARENVPAFVFSPKDYPSKAAF---E 71 (212)
T ss_dssp EEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTT----------CHHHHHHHHTTCCEEECCGGGSSSHHHH---H
T ss_pred EEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCC----------cHHHHHHHHcCCCEEEeCcccccchhhh---H
Confidence 55 5669999999999999987 5899999998543 3689999999999985 4444432111 1
Q ss_pred HHHHHHHhcCCCcEEEEE--------------------------------------------------------------
Q psy5230 76 NETHKLLNKIEFDIMIVM-------------------------------------------------------------- 93 (258)
Q Consensus 76 ~~~~~~l~~~~~Dl~vv~-------------------------------------------------------------- 93 (258)
.++++.|++++||++|++
T Consensus 72 ~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~I 151 (212)
T 3av3_A 72 SEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSLLPAFPGKDAIGQAYRAGVSETGVTVHYVDEGMDTGPV 151 (212)
T ss_dssp HHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCE
T ss_pred HHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecCcCCCCCCcCHHHHHHHcCCCeEEEEEEEECCCCCCCCE
Confidence 278899999999999998
Q ss_pred ------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCcCCCCCcccccc
Q psy5230 94 ------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNIGESYAPLIKKNEAVL 153 (258)
Q Consensus 94 ------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~~atya~k~~~~d~~I 153 (258)
+|.++||..+|++|+..++.+++.++|+.+.+ |.+ |.+..++|.+++|..|..+
T Consensus 152 i~Q~~v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~--g~~----~~~~~~~~~~~~t~~~~~~ 211 (212)
T 3av3_A 152 IAQRVVPIVPGEPIEALEERIHQVEHELYPTVLRMLLG--EKE----QQEERIENDGSETSIDQRV 211 (212)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHC----------------------------
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCC----ccccceeecCCcccccccc
Confidence 99999999999999999999999999999998 654 7788899999999888764
No 11
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=99.66 E-value=8.1e-16 Score=129.49 Aligned_cols=116 Identities=14% Similarity=0.204 Sum_probs=98.0
Q ss_pred CeEEEE--cCCHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc--cCCCCCCcccccc
Q psy5230 1 MKIIFA--GTSISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ--PISLKLNGKYHKI 74 (258)
Q Consensus 1 mrI~f~--Gs~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~--~~~~~~~~~~~~~ 74 (258)
|||+|| |+++|+.++|++|.+. +++|++|||+++. .+++++|+++|||++. +.++++..+|
T Consensus 23 ~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~----------~~~~~~A~~~gIp~~~~~~~~~~~r~~~--- 89 (229)
T 3auf_A 23 IRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRAD----------AYGLERARRAGVDALHMDPAAYPSRTAF--- 89 (229)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTT----------CHHHHHHHHTTCEEEECCGGGSSSHHHH---
T ss_pred cEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCc----------hHHHHHHHHcCCCEEEECcccccchhhc---
Confidence 599999 9999999999999986 5799999998543 2478999999999985 5555531111
Q ss_pred hHHHHHHHhcCCCcEEEEE-------------------------------------------------------------
Q psy5230 75 ANETHKLLNKIEFDIMIVM------------------------------------------------------------- 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------- 93 (258)
..++++.|++++||++|++
T Consensus 90 ~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~ 169 (229)
T 3auf_A 90 DAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSLLPAFPGLEAQRQALEHGVKVAGCTVHFVTAGVDEGP 169 (229)
T ss_dssp HHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSC
T ss_pred cHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccCcCcCCCCcCHHHHHHHcCCCeEEEEEEEECCCCcCCC
Confidence 1178899999999999998
Q ss_pred -------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy5230 94 -------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF 131 (258)
Q Consensus 94 -------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~ 131 (258)
+|.++||..+|++|+..++.+++.++|+.+.. |.+.
T Consensus 170 Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~--g~~~ 212 (229)
T 3auf_A 170 IILQAAVPVLEGDTVEDLRRRILAEEHRIYPEAIRLFAE--GRLV 212 (229)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCEE
T ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCcE
Confidence 99999999999999999999999999999998 7654
No 12
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=99.56 E-value=2.2e-14 Score=119.39 Aligned_cols=118 Identities=12% Similarity=0.131 Sum_probs=92.2
Q ss_pred CeEEEEcCCHHH--HHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC--CCCCCcccccc
Q psy5230 1 MKIIFAGTSISA--AAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI--SLKLNGKYHKI 74 (258)
Q Consensus 1 mrI~f~Gs~~fa--~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~--~~~~~~~~~~~ 74 (258)
|||++|+|+.-+ ..+++++.+. +++|++|+|++++. .++++|+++|||+++++ ++++..+|
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~----------~~~~~A~~~gIp~~~~~~~~~~~r~~~--- 67 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADA----------FGLERARQAGIATHTLIASAFDSREAY--- 67 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTC----------HHHHHHHHTTCEEEECCGGGCSSHHHH---
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCch----------HHHHHHHHcCCcEEEeCcccccchhhc---
Confidence 799999777543 3344444333 47899999986543 36899999999999854 44431111
Q ss_pred hHHHHHHHhcCCCcEEEEE-------------------------------------------------------------
Q psy5230 75 ANETHKLLNKIEFDIMIVM------------------------------------------------------------- 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------- 93 (258)
..++++.|++++||++|++
T Consensus 68 ~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSlLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~ 147 (212)
T 1jkx_A 68 DRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGP 147 (212)
T ss_dssp HHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHTTCSEEEEEEEECCSSTTCSC
T ss_pred cHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccCcccCCCCccHHHHHHHcCCCceEEEEEEEcccccCCC
Confidence 1278899999999999998
Q ss_pred -------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy5230 94 -------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFK 133 (258)
Q Consensus 94 -------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~ 133 (258)
+|.++||..+|++|+..++.+++.++|+.+.. |.+...
T Consensus 148 Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~--g~~~~~ 192 (212)
T 1jkx_A 148 VILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFAD--GRLKMH 192 (212)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCEEEE
T ss_pred EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCceEe
Confidence 99999999999999999999999999999998 776443
No 13
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=99.56 E-value=9.1e-14 Score=115.41 Aligned_cols=121 Identities=12% Similarity=0.170 Sum_probs=94.2
Q ss_pred CeEEEE--cCCHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE--ccCCCCCCcccccc
Q psy5230 1 MKIIFA--GTSISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII--QPISLKLNGKYHKI 74 (258)
Q Consensus 1 mrI~f~--Gs~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~--~~~~~~~~~~~~~~ 74 (258)
|||++| |++.....+++++.+. +++|++|||+|+++. ..++|+++|||++ ++.++++..+|
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~----------~~~~A~~~gIp~~~~~~~~~~~r~~~--- 67 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVA----------GLDKAERAGIPTRVINHKLYKNRVEF--- 67 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCH----------HHHHHHHTTCCEEECCGGGSSSHHHH---
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChH----------HHHHHHHcCCCEEEECccccCchhhh---
Confidence 689888 4444333344433332 589999999987654 4699999999997 56556542111
Q ss_pred hHHHHHHHhcCCCcEEEEE-------------------------------------------------------------
Q psy5230 75 ANETHKLLNKIEFDIMIVM------------------------------------------------------------- 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------- 93 (258)
..++.+.|++++||++|++
T Consensus 68 ~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~ 147 (209)
T 1meo_A 68 DSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQ 147 (209)
T ss_dssp HHHHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHHTCSEEEEEEEECCC---CCC
T ss_pred hHHHHHHHHhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEccCcCcCCCCccHHHHHHHcCCCcEEEEEEEECCCCcCCC
Confidence 1177889999999999998
Q ss_pred -------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Q psy5230 94 -------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQS 136 (258)
Q Consensus 94 -------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~ 136 (258)
+|.++||..+|++|+..++.+++.++|+.+.+ |.+...+|.
T Consensus 148 Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~--g~~~~~~~~ 195 (209)
T 1meo_A 148 IILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVAS--GTVQLGENG 195 (209)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH--TSEEECTTS
T ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh--CCceEcCCC
Confidence 99999999999999999999999999999999 888777764
No 14
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=99.53 E-value=5.9e-14 Score=116.82 Aligned_cols=115 Identities=12% Similarity=0.156 Sum_probs=93.5
Q ss_pred CeEEEE--cCCHHHHHHHHHHHh-CCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCC--CCCcccccch
Q psy5230 1 MKIIFA--GTSISAAAILDTLYN-SEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISL--KLNGKYHKIA 75 (258)
Q Consensus 1 mrI~f~--Gs~~fa~~~L~~L~~-~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~--~~~~~~~~~~ 75 (258)
|||+|| |++++...+++++.+ .+++|++|+|+|++ ++.++|+++|||+++++.- .+.. +..
T Consensus 13 ~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a-----------~~~~~A~~~gIp~~~~~~~~~~~r~---~~d 78 (215)
T 3da8_A 13 ARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDREC-----------RAAEIAAEASVPVFTVRLADHPSRD---AWD 78 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCC-----------HHHHHHHHTTCCEEECCGGGSSSHH---HHH
T ss_pred cEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCch-----------HHHHHHHHcCCCEEEeCcccccchh---hhh
Confidence 599999 888888888877744 13589999998752 5789999999999998421 1110 112
Q ss_pred HHHHHHHhcCCCcEEEEE--------------------------------------------------------------
Q psy5230 76 NETHKLLNKIEFDIMIVM-------------------------------------------------------------- 93 (258)
Q Consensus 76 ~~~~~~l~~~~~Dl~vv~-------------------------------------------------------------- 93 (258)
.++.+.|++++||++|++
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~I 158 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPI 158 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCE
T ss_pred HHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcccccCCCCchHHHHHHHcCCCeEEEEEEEEcCCCCCCCE
Confidence 278899999999999999
Q ss_pred ------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy5230 94 ------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF 131 (258)
Q Consensus 94 ------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~ 131 (258)
+|.++||..+|++|+..++.+++.++|+.+.+ |.+.
T Consensus 159 i~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~--g~~~ 200 (215)
T 3da8_A 159 LAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALAT--HGVT 200 (215)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH--HCEE
T ss_pred EEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCcE
Confidence 99999999999999999999999999999999 7653
No 15
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=99.44 E-value=1.1e-12 Score=109.18 Aligned_cols=117 Identities=15% Similarity=0.231 Sum_probs=94.4
Q ss_pred CeEEEE--cCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC--CCCCCcccccch
Q psy5230 1 MKIIFA--GTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI--SLKLNGKYHKIA 75 (258)
Q Consensus 1 mrI~f~--Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~--~~~~~~~~~~~~ 75 (258)
|||++| |+++....+++++.+. +++|++|+|+++.. ...++|+++|||+++.+ ++.+..+ ..
T Consensus 6 ~riavl~SG~Gsnl~all~~~~~~~~~eI~~Vis~~~~a----------~~~~~A~~~gIp~~~~~~~~~~~r~~---~d 72 (215)
T 3tqr_A 6 LPIVVLISGNGTNLQAIIGAIQKGLAIEIRAVISNRADA----------YGLKRAQQADIPTHIIPHEEFPSRTD---FE 72 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHTTCSEEEEEEEESCTTC----------HHHHHHHHTTCCEEECCGGGSSSHHH---HH
T ss_pred cEEEEEEeCCcHHHHHHHHHHHcCCCCEEEEEEeCCcch----------HHHHHHHHcCCCEEEeCccccCchhH---hH
Confidence 689999 8888888888888763 57999999975432 24789999999998743 2322100 11
Q ss_pred HHHHHHHhcCCCcEEEEE--------------------------------------------------------------
Q psy5230 76 NETHKLLNKIEFDIMIVM-------------------------------------------------------------- 93 (258)
Q Consensus 76 ~~~~~~l~~~~~Dl~vv~-------------------------------------------------------------- 93 (258)
.++++.|++++||++|++
T Consensus 73 ~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~I 152 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERALAAGETEHGVSVHYVTEDLDAGPL 152 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECC-CTTCSCE
T ss_pred HHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcccCCCCCChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCE
Confidence 278899999999999998
Q ss_pred ------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy5230 94 ------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFF 132 (258)
Q Consensus 94 ------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~ 132 (258)
+|.++||..+|++|+..++.+++.++|+.+.+ |.+..
T Consensus 153 i~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~--g~~~~ 195 (215)
T 3tqr_A 153 ICQARLSITPQDTPETLKTRVHALEHIIYPEVLSWFAA--GRLNY 195 (215)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCEEE
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCeEe
Confidence 99999999999999999999999999999999 76543
No 16
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=99.43 E-value=1.2e-12 Score=108.55 Aligned_cols=121 Identities=19% Similarity=0.229 Sum_probs=95.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC---C---CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc--cCCCCCCcccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS---E---HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ--PISLKLNGKYH 72 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~--~~~~~~~~~~~ 72 (258)
|||++|.|+.= .+|++|+++ + .+|++|+|..+ . .+++++|+++|||++. +.++++..+|
T Consensus 3 ~riavl~Sg~G--snl~ali~~~~~~~l~~eI~~Visn~~--~--------a~v~~~A~~~gIp~~~~~~~~~~~r~~~- 69 (211)
T 3p9x_A 3 KRVAIFASGSG--TNAEAIIQSQKAGQLPCEVALLITDKP--G--------AKVVERVKVHEIPVCALDPKTYPSKEAY- 69 (211)
T ss_dssp CEEEEECCTTC--HHHHHHHHHHHTTCCSSEEEEEEESCS--S--------SHHHHHHHTTTCCEEECCGGGSSSHHHH-
T ss_pred CEEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEEEEECCC--C--------cHHHHHHHHcCCCEEEeChhhcCchhhh-
Confidence 79999988742 457777753 3 58999999532 1 4799999999999875 4445432111
Q ss_pred cchHHHHHHHhcCCCcEEEEE-----------------------------------------------------------
Q psy5230 73 KIANETHKLLNKIEFDIMIVM----------------------------------------------------------- 93 (258)
Q Consensus 73 ~~~~~~~~~l~~~~~Dl~vv~----------------------------------------------------------- 93 (258)
..++++.|++++||++|++
T Consensus 70 --d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~ 147 (211)
T 3p9x_A 70 --EIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDT 147 (211)
T ss_dssp --HHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSEEEEESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCSSSSC
T ss_pred --HHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCeEEECCccCCCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCC
Confidence 1278899999999999998
Q ss_pred ---------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy5230 94 ---------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLFFKPQSNI 138 (258)
Q Consensus 94 ---------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~~~~Q~~~ 138 (258)
+|.++||..+|++|+..++.+++.++|+.+.. |.....-|.+.
T Consensus 148 G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~--g~~~~~~~~~~ 199 (211)
T 3p9x_A 148 GPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLS--KAENLYFQSHH 199 (211)
T ss_dssp SCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTC--TTTCCSCCC--
T ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCcchhhhhcc
Confidence 99999999999999999999999999999999 88777777654
No 17
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=99.39 E-value=2.2e-12 Score=107.34 Aligned_cols=110 Identities=16% Similarity=0.203 Sum_probs=91.1
Q ss_pred eEE--EEcCCHHHHHHHHHHHhCC--CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC--CCCCCcccccch
Q psy5230 2 KII--FAGTSISAAAILDTLYNSE--HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI--SLKLNGKYHKIA 75 (258)
Q Consensus 2 rI~--f~Gs~~fa~~~L~~L~~~~--~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~--~~~~~~~~~~~~ 75 (258)
||+ +.|++++...+++++.+.+ ++|++|+|+++.. + ..++|+++|||++..+ +++++
T Consensus 10 ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a--~--------~l~~A~~~gIp~~~~~~~~~~~~------- 72 (215)
T 3kcq_A 10 RVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEA--R--------GLLIAQSYGIPTFVVKRKPLDIE------- 72 (215)
T ss_dssp EEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTC--T--------HHHHHHHTTCCEEECCBTTBCHH-------
T ss_pred EEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcch--H--------HHHHHHHcCCCEEEeCcccCChH-------
Confidence 554 4588899999999886643 6899999964321 1 3689999999998643 45444
Q ss_pred HHHHHHHhcCCCcEEEEE--------------------------------------------------------------
Q psy5230 76 NETHKLLNKIEFDIMIVM-------------------------------------------------------------- 93 (258)
Q Consensus 76 ~~~~~~l~~~~~Dl~vv~-------------------------------------------------------------- 93 (258)
++.+.|++++||++|++
T Consensus 73 -~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~I 151 (215)
T 3kcq_A 73 -HISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGPI 151 (215)
T ss_dssp -HHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCE
T ss_pred -HHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcccccCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCCE
Confidence 89999999999999998
Q ss_pred ------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy5230 94 ------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKLF 131 (258)
Q Consensus 94 ------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~~ 131 (258)
+|.++||..+|++|+..++.+++.++|+.+.+ |.+.
T Consensus 152 i~Q~~v~I~~~dt~~~L~~rl~~~e~~ll~~~l~~~~~--g~~~ 193 (215)
T 3kcq_A 152 IMQAAVPVLREDTAESLASRILAAEHVCYPKGVKLIAQ--DKIK 193 (215)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCEE
T ss_pred EEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCeE
Confidence 99999999999999999999999999999999 7653
No 18
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=99.34 E-value=6.9e-12 Score=103.90 Aligned_cols=114 Identities=15% Similarity=0.130 Sum_probs=89.6
Q ss_pred eEE--EEcCCHHHHHHHHHHHhCC--CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCC--CCCCcccccch
Q psy5230 2 KII--FAGTSISAAAILDTLYNSE--HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPIS--LKLNGKYHKIA 75 (258)
Q Consensus 2 rI~--f~Gs~~fa~~~L~~L~~~~--~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~--~~~~~~~~~~~ 75 (258)
||+ +.|++++...+++++.+.+ ++|++|+|+++. .+ ..++|+++|||++.++. +++..+ ..
T Consensus 9 ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~--a~--------~l~~A~~~gIp~~~~~~~~~~~r~~---~d 75 (209)
T 4ds3_A 9 RVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAE--AG--------GLAKAEAAGIATQVFKRKDFASKEA---HE 75 (209)
T ss_dssp EEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTT--CT--------HHHHHHHTTCCEEECCGGGSSSHHH---HH
T ss_pred cEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcc--cH--------HHHHHHHcCCCEEEeCccccCCHHH---HH
Confidence 454 4588889999999987643 689999996432 22 36899999999997543 332110 11
Q ss_pred HHHHHHHhcCCCcEEEEE--------------------------------------------------------------
Q psy5230 76 NETHKLLNKIEFDIMIVM-------------------------------------------------------------- 93 (258)
Q Consensus 76 ~~~~~~l~~~~~Dl~vv~-------------------------------------------------------------- 93 (258)
.++.+.|++++||++|++
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~I 155 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHPSLLPLFPGLHTHQRALDAGMKLAGCTVHLVTEGMDEGPI 155 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCC--CCCCE
T ss_pred HHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECCccccCCCChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCe
Confidence 278899999999999998
Q ss_pred ------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy5230 94 ------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL 130 (258)
Q Consensus 94 ------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~ 130 (258)
+|.++||..+|++|+..++.+++.++|+.+.+ |.+
T Consensus 156 i~Q~~v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~--g~~ 196 (209)
T 4ds3_A 156 LAQAAVPVLDGDTAETLAARVLKAEHRLYPLALQKFAA--GEK 196 (209)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHC--C--
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCC
Confidence 99999999999999999999999999999998 765
No 19
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=99.11 E-value=3.6e-10 Score=97.92 Aligned_cols=111 Identities=10% Similarity=0.081 Sum_probs=88.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC---C---CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC-CCCCCccccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS---E---HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI-SLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~-~~~~~~~~~~ 73 (258)
|||++|+|+.- .+|++|+++ | .+|++|+|..+. ++.+|+++|||++..+ +..+..++
T Consensus 91 ~ri~vl~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~------------~~~~A~~~gIp~~~~~~~~~~r~~~-- 154 (286)
T 3n0v_A 91 PKVVIMVSKAD--HCLNDLLYRQRIGQLGMDVVAVVSNHPD------------LEPLAHWHKIPYYHFALDPKDKPGQ-- 154 (286)
T ss_dssp CEEEEEESSCC--HHHHHHHHHHHTTSSCCEEEEEEESSST------------THHHHHHTTCCEEECCCBTTBHHHH--
T ss_pred cEEEEEEeCCC--CCHHHHHHHHHCCCCCcEEEEEEeCcHH------------HHHHHHHcCCCEEEeCCCcCCHHHH--
Confidence 69999999864 488888763 3 689999996431 5678999999998733 22111001
Q ss_pred chHHHHHHHhcCCCcEEEEE------------------------------------------------------------
Q psy5230 74 IANETHKLLNKIEFDIMIVM------------------------------------------------------------ 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------ 93 (258)
..++++.|+++++|++|++
T Consensus 155 -~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G 233 (286)
T 3n0v_A 155 -ERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHHSLLPGFKGAKPYHQAYNKGVKMVGATAHYINNDLDEG 233 (286)
T ss_dssp -HHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEECSSTTCCCSCHHHHHHHHTCSEEEEEEEECCSSTTCS
T ss_pred -HHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEeccccccCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCC
Confidence 1167899999999999998
Q ss_pred --------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy5230 94 --------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL 130 (258)
Q Consensus 94 --------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~ 130 (258)
+|.++||..+|.+|+..++.+++.++++.+.+ |.+
T Consensus 234 pIi~Q~~~~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~--~~~ 276 (286)
T 3n0v_A 234 PIIAQGVEVVDHSHYPEDLIAKGRDIECLTLARAVGYHIE--RRV 276 (286)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCE
T ss_pred ceeEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh--CCE
Confidence 99999999999999999999999999999998 654
No 20
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=99.10 E-value=7.2e-10 Score=96.61 Aligned_cols=111 Identities=10% Similarity=0.159 Sum_probs=88.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC------CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCC-CCccccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS------EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLK-LNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~------~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~-~~~~~~~ 73 (258)
|||++|+|+.- .+|++|+++ +.+|++|+|..+ .++++|+++|||+++++.-+ +.. +
T Consensus 106 ~ri~vl~Sg~g--~nl~~ll~~~~~g~l~~~I~~Visn~~------------~~~~~A~~~gIp~~~~~~~~~~r~---~ 168 (302)
T 3o1l_A 106 KRVVLMASRES--HCLADLLHRWHSDELDCDIACVISNHQ------------DLRSMVEWHDIPYYHVPVDPKDKE---P 168 (302)
T ss_dssp CEEEEEECSCC--HHHHHHHHHHHTTCSCSEEEEEEESSS------------TTHHHHHTTTCCEEECCCCSSCCH---H
T ss_pred cEEEEEEeCCc--hhHHHHHHHHHCCCCCcEEEEEEECcH------------HHHHHHHHcCCCEEEcCCCcCCHH---H
Confidence 69999999864 378888763 368999999521 15789999999999874211 110 0
Q ss_pred chHHHHHHHhcCCCcEEEEE------------------------------------------------------------
Q psy5230 74 IANETHKLLNKIEFDIMIVM------------------------------------------------------------ 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------ 93 (258)
...++++.|++++||++|++
T Consensus 169 ~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHpSlLP~frG~~p~~~Ai~~G~k~tG~TvH~v~~~lD~G 248 (302)
T 3o1l_A 169 AFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHHSFLPSFVGAKPYHQASLRGVKLIGATCHYVTEELDAG 248 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCS
T ss_pred HHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcccccCCCCccHHHHHHHcCCCeEEEEEEEECCCCcCC
Confidence 11267899999999999998
Q ss_pred --------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy5230 94 --------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL 130 (258)
Q Consensus 94 --------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~ 130 (258)
+|.++||..+|.+|+..++.+++.++++.+.+ +.+
T Consensus 249 pII~Q~~v~I~~~dt~~~L~~r~~~~e~~~l~~av~~~~~--~~v 291 (302)
T 3o1l_A 249 PIIEQDVVRVSHRDSIENMVRFGRDVEKMVLARGLRAHLE--DRV 291 (302)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCE
T ss_pred CeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh--CCE
Confidence 99999999999999999999999999999998 654
No 21
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=99.05 E-value=9.2e-10 Score=95.60 Aligned_cols=111 Identities=11% Similarity=0.101 Sum_probs=87.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC------CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC-CCCCCccccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS------EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI-SLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~------~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~-~~~~~~~~~~ 73 (258)
+||++|.|..- .+|++|+++ +.+|++|+|..+ .++.+|+++|||++..+ +..+..+
T Consensus 96 ~ri~vl~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~------------~~~~~A~~~gIp~~~~~~~~~~r~~--- 158 (292)
T 3lou_A 96 PKVLIMVSKLE--HCLADLLFRWKMGELKMDIVGIVSNHP------------DFAPLAAQHGLPFRHFPITADTKAQ--- 158 (292)
T ss_dssp CEEEEEECSCC--HHHHHHHHHHHHTSSCCEEEEEEESSS------------TTHHHHHHTTCCEEECCCCSSCHHH---
T ss_pred CEEEEEEcCCC--cCHHHHHHHHHcCCCCcEEEEEEeCcH------------HHHHHHHHcCCCEEEeCCCcCCHHH---
Confidence 68999988763 478888763 368999999632 14678999999998733 2221110
Q ss_pred chHHHHHHHhcCCCcEEEEE------------------------------------------------------------
Q psy5230 74 IANETHKLLNKIEFDIMIVM------------------------------------------------------------ 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------ 93 (258)
...++++.|+++++|++|++
T Consensus 159 ~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G 238 (292)
T 3lou_A 159 QEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEG 238 (292)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCS
T ss_pred HHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCCCcCcCCCCccHHHHHHHcCCCeEEEEEEEEcCCCcCC
Confidence 11267899999999999998
Q ss_pred --------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy5230 94 --------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL 130 (258)
Q Consensus 94 --------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~ 130 (258)
+|.++||..+|.+|+.+++.+++.++++.+.+ |.+
T Consensus 239 ~Ii~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~--~~~ 281 (292)
T 3lou_A 239 PIIEQVVERVDHSYRPEQLLAVGRDVECITLARAVKAFIE--RRV 281 (292)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCE
T ss_pred CEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh--CCE
Confidence 99999999999999999999999999999998 654
No 22
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=98.89 E-value=1.9e-09 Score=93.44 Aligned_cols=112 Identities=10% Similarity=0.042 Sum_probs=85.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC---C---CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC-CCCCCccccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS---E---HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI-SLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~-~~~~~~~~~~ 73 (258)
+||++|.|..-+ +|++|+++ | .+|++|+|..+ .+++++|+++|||++..+ +..+..+
T Consensus 90 ~ri~vl~Sg~g~--nl~~ll~~~~~g~l~~~i~~Visn~p-----------~~~~~~A~~~gIp~~~~~~~~~~r~~--- 153 (288)
T 3obi_A 90 RKVMLLVSQSDH--CLADILYRWRVGDLHMIPTAIVSNHP-----------RETFSGFDFGDIPFYHFPVNKDTRRQ--- 153 (288)
T ss_dssp EEEEEEECSCCH--HHHHHHHHHHTTSSCEEEEEEEESSC-----------GGGSCCTTTTTCCEEECCCCTTTHHH---
T ss_pred cEEEEEEcCCCC--CHHHHHHHHHCCCCCeEEEEEEcCCC-----------hhHHHHHHHcCCCEEEeCCCcccHHH---
Confidence 589999887533 67777653 3 58999999521 125577999999998743 2211100
Q ss_pred chHHHHHHHhcCCCcEEEEE------------------------------------------------------------
Q psy5230 74 IANETHKLLNKIEFDIMIVM------------------------------------------------------------ 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------ 93 (258)
...++++.|+++++|++|++
T Consensus 154 ~~~~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~A~~~G~~~~G~Tvh~v~~~~D~G 233 (288)
T 3obi_A 154 QEAAITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHHSFLPGFKGAKPYHQAFDRGVKLIGATAHYVTSALDEG 233 (288)
T ss_dssp HHHHHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCS
T ss_pred HHHHHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcccccCCCCchHHHHHHHcCCCEEEEEEEEECCCCcCC
Confidence 11167899999999999998
Q ss_pred --------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy5230 94 --------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL 130 (258)
Q Consensus 94 --------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~ 130 (258)
+|.++||..+|.+|+.+++.+++.++++.+.+ |.+
T Consensus 234 pIi~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~--~~~ 276 (288)
T 3obi_A 234 PIIDQDVERISHRDTPADLVRKGRDIERRVLSRALHYHLD--DRV 276 (288)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCE
T ss_pred CeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh--CCE
Confidence 99999999999999999999999999999998 654
No 23
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=98.88 E-value=2.6e-09 Score=92.57 Aligned_cols=112 Identities=11% Similarity=0.129 Sum_probs=86.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC---C---CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCC-CCCCccccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS---E---HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPIS-LKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~-~~~~~~~~~ 73 (258)
|||++|.|..- .+|++|+++ | .+|++|+|..+. +++++|+++|||++..+. ..+.. +
T Consensus 89 ~ri~vl~Sg~g--~nl~~ll~~~~~g~l~~~i~~Visn~~~-----------a~~~~A~~~gIp~~~~~~~~~~r~---~ 152 (287)
T 3nrb_A 89 KKVVIMVSKFD--HCLGDLLYRHRLGELDMEVVGIISNHPR-----------EALSVSLVGDIPFHYLPVTPATKA---A 152 (287)
T ss_dssp CEEEEEECSCC--HHHHHHHHHHHHTSSCCEEEEEEESSCG-----------GGCCCCCCTTSCEEECCCCGGGHH---H
T ss_pred cEEEEEEeCCC--cCHHHHHHHHHCCCCCeEEEEEEeCChH-----------HHHHHHHHcCCCEEEEeccCcchh---h
Confidence 68999988753 477777753 3 689999996322 155679999999987432 11110 0
Q ss_pred chHHHHHHHhcCCCcEEEEE------------------------------------------------------------
Q psy5230 74 IANETHKLLNKIEFDIMIVM------------------------------------------------------------ 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~------------------------------------------------------------ 93 (258)
...++++.|+++++|++|++
T Consensus 153 ~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~k~tG~Tvh~v~~~lD~G 232 (287)
T 3nrb_A 153 QESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHSFLPGFKGAKPYHQAHTRGVKLIGATAHFVTADLDEG 232 (287)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSSSCC
T ss_pred HHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECcccccCCCCchHHHHHHHcCCCeEEEEEEEECCCCcCC
Confidence 11267899999999999998
Q ss_pred --------eeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy5230 94 --------GILPEDTSLTLQNKLEKLSKILIIDTIKKIEYDMTKL 130 (258)
Q Consensus 94 --------~I~~~dt~~~L~~kl~~~g~~ll~~~l~~l~~~~g~~ 130 (258)
+|.++||..+|.+|+.+++.+++.++++.+.+ |.+
T Consensus 233 pIi~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~--~~~ 275 (287)
T 3nrb_A 233 PIIAQDVEHVSHRDSAEDLVRKGRDIERRVLSRAVLLFLE--DRL 275 (287)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCE
T ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHc--CCE
Confidence 99999999999999999999999999999998 654
No 24
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.89 E-value=0.02 Score=46.62 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=52.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+++|.+.+|..+.+.|.+.|++++.+-..| ..+.+++.+.|.+++.-+-. +. +.++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~------------~~~~~l~~~~~~~~i~gd~~-~~--------~~l~ 59 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR------------ELCEEFAKKLKATIIHGDGS-HK--------EILR 59 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH------------HHHHHHHHHSSSEEEESCTT-SH--------HHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH------------HHHHHHHHHcCCeEEEcCCC-CH--------HHHH
Confidence 999999999999999999999999886553221 23667777889888765432 33 5555
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
...-.++|++|++
T Consensus 60 ~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 60 DAEVSKNDVVVIL 72 (218)
T ss_dssp HHTCCTTCEEEEC
T ss_pred hcCcccCCEEEEe
Confidence 5444578988765
No 25
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.22 E-value=0.074 Score=39.34 Aligned_cols=72 Identities=24% Similarity=0.188 Sum_probs=46.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|+|+++|.+.+|..+.+.|.+.|++++.+ ... +..+..++.+.|+.++..+ ..+. +.+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~-d~~-----------~~~~~~~~~~~~~~~~~~d-~~~~--------~~l~ 63 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLI-DID-----------KDICKKASAEIDALVINGD-CTKI--------KTLE 63 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-ESC-----------HHHHHHHHHHCSSEEEESC-TTSH--------HHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEE-ECC-----------HHHHHHHHHhcCcEEEEcC-CCCH--------HHHH
Confidence 89999999999999999999998887544 321 1234556666688765432 2222 3333
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
...-.++|++|++
T Consensus 64 ~~~~~~~d~vi~~ 76 (140)
T 1lss_A 64 DAGIEDADMYIAV 76 (140)
T ss_dssp HTTTTTCSEEEEC
T ss_pred HcCcccCCEEEEe
Confidence 2222368988776
No 26
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=94.98 E-value=0.041 Score=48.34 Aligned_cols=67 Identities=15% Similarity=0.197 Sum_probs=51.1
Q ss_pred CeEEEEcCCHHHH-HHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAA-AILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~-~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.++. ..+..|.+. ++++++|+... +...+++|.+.|++.+. ++
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~a~~~g~~~~~---------------~~ 81 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRR-----------WDRAKRFTERFGGEPVE---------------GY 81 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESS-----------HHHHHHHHHHHCSEEEE---------------SH
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCC-----------HHHHHHHHHHcCCCCcC---------------CH
Confidence 5899999999998 688888887 58888888641 12367889999998762 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
-+.+.+-++|+++++
T Consensus 82 ~~ll~~~~~D~V~i~ 96 (350)
T 3rc1_A 82 PALLERDDVDAVYVP 96 (350)
T ss_dssp HHHHTCTTCSEEEEC
T ss_pred HHHhcCCCCCEEEEC
Confidence 355666788998887
No 27
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=94.81 E-value=0.048 Score=47.82 Aligned_cols=67 Identities=13% Similarity=0.191 Sum_probs=50.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+|+|.+.+|...+..|.+. ++++++|+.. + +...++++.++|++++. ++
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~-~----------~~~~~~~~~~~~~~~~~---------------~~ 67 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDI-D----------PAALKAAVERTGARGHA---------------SL 67 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS-S----------HHHHHHHHHHHCCEEES---------------CH
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC-C----------HHHHHHHHHHcCCceeC---------------CH
Confidence 5899999999999999999886 5788888763 1 12367888899986653 23
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+-++|+++++
T Consensus 68 ~~ll~~~~~D~V~i~ 82 (354)
T 3q2i_A 68 TDMLAQTDADIVILT 82 (354)
T ss_dssp HHHHHHCCCSEEEEC
T ss_pred HHHhcCCCCCEEEEC
Confidence 355666788998877
No 28
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=94.73 E-value=0.042 Score=48.17 Aligned_cols=67 Identities=13% Similarity=0.162 Sum_probs=50.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|||+++|.+.++...+..|.+. ++++++|+.. + +...+++|.++|++.+. ++.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~-~----------~~~~~~~~~~~g~~~~~---------------~~~ 59 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR-T----------EDKREKFGKRYNCAGDA---------------TME 59 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS-S----------HHHHHHHHHHHTCCCCS---------------SHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC-C----------HHHHHHHHHHcCCCCcC---------------CHH
Confidence 5899999999999999999876 6788888763 1 12367888888987631 334
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+.+.++|+++++
T Consensus 60 ~~l~~~~~D~V~i~ 73 (354)
T 3db2_A 60 ALLAREDVEMVIIT 73 (354)
T ss_dssp HHHHCSSCCEEEEC
T ss_pred HHhcCCCCCEEEEe
Confidence 55667788988877
No 29
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=94.63 E-value=0.073 Score=46.40 Aligned_cols=67 Identities=10% Similarity=0.197 Sum_probs=50.0
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~~~~~~~~ 77 (258)
|||+++|++.+|.. .+..|.+. +.++++|+.. + +.-.+++|+++|+|- |. +
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~-~----------~~~a~~~a~~~g~~~~y~---------------d 77 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR-D----------LTRAREMADRFSVPHAFG---------------S 77 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS-S----------HHHHHHHHHHHTCSEEES---------------S
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC-C----------HHHHHHHHHHcCCCeeeC---------------C
Confidence 59999999999975 56777765 5788888864 2 123688999999973 32 3
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+-+.|.+-++|+++++
T Consensus 78 ~~ell~~~~iDaV~I~ 93 (350)
T 4had_A 78 YEEMLASDVIDAVYIP 93 (350)
T ss_dssp HHHHHHCSSCSEEEEC
T ss_pred HHHHhcCCCCCEEEEe
Confidence 4466777889999888
No 30
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.57 E-value=0.11 Score=39.16 Aligned_cols=71 Identities=13% Similarity=0.094 Sum_probs=48.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
.+|+++|.+.+|..+.+.|.+.|++++.+-..|+ -.+.+.+.|++++.-+- .+. ++++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~-------------~~~~~~~~g~~~i~gd~-~~~--------~~l~ 65 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT-------------RVDELRERGVRAVLGNA-ANE--------EIMQ 65 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH-------------HHHHHHHTTCEEEESCT-TSH--------HHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH-------------HHHHHHHcCCCEEECCC-CCH--------HHHH
Confidence 3799999999999999999999998876644321 23345568998876433 233 5555
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
...-.++|++|++
T Consensus 66 ~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 66 LAHLECAKWLILT 78 (140)
T ss_dssp HTTGGGCSEEEEC
T ss_pred hcCcccCCEEEEE
Confidence 5444568887654
No 31
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=94.56 E-value=0.087 Score=45.52 Aligned_cols=67 Identities=15% Similarity=0.215 Sum_probs=47.9
Q ss_pred CeEEEEcCCHHHHHH-HHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAI-LDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~-L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.++... +..|.+.++++++|+... +...++++++.|++ ++. ++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~-----------~~~~~~~~~~~g~~~~~~---------------~~ 54 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTS-----------AERGAAYATENGIGKSVT---------------SV 54 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSC-----------HHHHHHHHHHTTCSCCBS---------------CH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCC-----------HHHHHHHHHHcCCCcccC---------------CH
Confidence 899999999999987 788877668888887641 12356788888876 321 22
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+.++|+++++
T Consensus 55 ~~~l~~~~~D~V~i~ 69 (332)
T 2glx_A 55 EELVGDPDVDAVYVS 69 (332)
T ss_dssp HHHHTCTTCCEEEEC
T ss_pred HHHhcCCCCCEEEEe
Confidence 344555578888877
No 32
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=94.49 E-value=0.08 Score=46.13 Aligned_cols=67 Identities=9% Similarity=0.192 Sum_probs=50.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|||+++|.+.++...+..|.+. ++++++|+... +...+++|.+.|++++. ++.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~a~~~g~~~~~---------------~~~ 58 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPF-----------IEGAQRLAEANGAEAVA---------------SPD 58 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS-----------HHHHHHHHHTTTCEEES---------------SHH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCC-----------HHHHHHHHHHcCCceeC---------------CHH
Confidence 5899999999999999999886 57888887631 12367788888876652 333
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+.+.++|+++++
T Consensus 59 ~~l~~~~~D~V~i~ 72 (344)
T 3euw_A 59 EVFARDDIDGIVIG 72 (344)
T ss_dssp HHTTCSCCCEEEEC
T ss_pred HHhcCCCCCEEEEe
Confidence 55666788988877
No 33
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=94.38 E-value=0.1 Score=45.22 Aligned_cols=66 Identities=6% Similarity=0.098 Sum_probs=49.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|||+++|.+.++...+..|.+. ++++++|+.. + +...+++|.+.|++ +. ++-
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~-~----------~~~~~~~~~~~~~~-~~---------------~~~ 56 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADA-F----------PAAAEAIAGAYGCE-VR---------------TID 56 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS-S----------HHHHHHHHHHTTCE-EC---------------CHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC-C----------HHHHHHHHHHhCCC-cC---------------CHH
Confidence 5899999999999999999886 6788888763 1 12367889999988 32 233
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+.+-++|+++++
T Consensus 57 ~~l~~~~~D~V~i~ 70 (331)
T 4hkt_A 57 AIEAAADIDAVVIC 70 (331)
T ss_dssp HHHHCTTCCEEEEC
T ss_pred HHhcCCCCCEEEEe
Confidence 55666678998877
No 34
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.17 E-value=0.15 Score=38.10 Aligned_cols=71 Identities=6% Similarity=0.073 Sum_probs=47.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
++|+++|.+.+|..+.+.|.+.|++++.+-..| . -.+.+.+.|+.++..+ ..++ +.++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~------------~-~~~~~~~~~~~~~~gd-~~~~--------~~l~ 64 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK------------E-KIELLEDEGFDAVIAD-PTDE--------SFYR 64 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH------------H-HHHHHHHTTCEEEECC-TTCH--------HHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH------------H-HHHHHHHCCCcEEECC-CCCH--------HHHH
Confidence 379999999999999999999999886553321 1 2334455688776543 3333 5555
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
...-.++|++|++
T Consensus 65 ~~~~~~~d~vi~~ 77 (141)
T 3llv_A 65 SLDLEGVSAVLIT 77 (141)
T ss_dssp HSCCTTCSEEEEC
T ss_pred hCCcccCCEEEEe
Confidence 5444578887664
No 35
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=93.94 E-value=0.1 Score=45.27 Aligned_cols=67 Identities=18% Similarity=0.283 Sum_probs=49.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC---CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcccccchH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE---HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGKYHKIAN 76 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~---~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~~~~ 76 (258)
|||+++|++.++...++.|.+.+ +++++|+.. + +...+++|.++|+| ++.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~----------~~~a~~~a~~~~~~~~~~--------------- 56 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-D----------LSRAKEFAQKHDIPKAYG--------------- 56 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-S----------HHHHHHHHHHHTCSCEES---------------
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-C----------HHHHHHHHHHcCCCcccC---------------
Confidence 59999999999999999887653 468888763 1 12367899999996 332
Q ss_pred HHHHHHhcCCCcEEEEE
Q psy5230 77 ETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 77 ~~~~~l~~~~~Dl~vv~ 93 (258)
++.+.+.+-++|+++++
T Consensus 57 ~~~~ll~~~~vD~V~i~ 73 (334)
T 3ohs_X 57 SYEELAKDPNVEVAYVG 73 (334)
T ss_dssp SHHHHHHCTTCCEEEEC
T ss_pred CHHHHhcCCCCCEEEEC
Confidence 34456667789998887
No 36
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=93.83 E-value=0.1 Score=45.19 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=50.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.+|...+..|.+. ++++++|+.. + +...+++|.++|++ ++. ++
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~-~----------~~~~~~~~~~~~~~~~~~---------------~~ 59 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR-R----------LENAQKMAKELAIPVAYG---------------SY 59 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS-S----------SHHHHHHHHHTTCCCCBS---------------SH
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC-C----------HHHHHHHHHHcCCCceeC---------------CH
Confidence 5899999999999999999885 5788888753 1 23467889999985 221 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+-++|+++++
T Consensus 60 ~~ll~~~~~D~V~i~ 74 (330)
T 3e9m_A 60 EELCKDETIDIIYIP 74 (330)
T ss_dssp HHHHHCTTCSEEEEC
T ss_pred HHHhcCCCCCEEEEc
Confidence 456666789998877
No 37
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=93.74 E-value=0.11 Score=45.37 Aligned_cols=67 Identities=13% Similarity=0.175 Sum_probs=49.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.++...+..|.+. ++++++|+.. + +...+++|++.|++ ++. ++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~-~----------~~~~~~~~~~~~~~~~~~---------------~~ 56 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV-R----------EDRLREMKEKLGVEKAYK---------------DP 56 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS-C----------HHHHHHHHHHHTCSEEES---------------SH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC-C----------HHHHHHHHHHhCCCceeC---------------CH
Confidence 5999999999999999998875 5788888763 1 12367888898986 432 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+-++|+++++
T Consensus 57 ~~ll~~~~~D~V~i~ 71 (344)
T 3ezy_A 57 HELIEDPNVDAVLVC 71 (344)
T ss_dssp HHHHHCTTCCEEEEC
T ss_pred HHHhcCCCCCEEEEc
Confidence 455666688998877
No 38
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=93.64 E-value=0.2 Score=43.96 Aligned_cols=69 Identities=16% Similarity=0.177 Sum_probs=49.4
Q ss_pred CeEEEEcCCHHHHHHHHHHH-hC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLY-NS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~-~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.+|...+..|. +. ++++++|+.. + +...+++|++.|+++.... ++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~-~----------~~~~~~~a~~~g~~~~~~~-------------~~ 79 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI-V----------AGRAQAALDKYAIEAKDYN-------------DY 79 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS-S----------TTHHHHHHHHHTCCCEEES-------------SH
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC-C----------HHHHHHHHHHhCCCCeeeC-------------CH
Confidence 58999999999999999998 43 5788888764 1 1236788999885321111 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+-++|+++++
T Consensus 80 ~~ll~~~~~D~V~i~ 94 (357)
T 3ec7_A 80 HDLINDKDVEVVIIT 94 (357)
T ss_dssp HHHHHCTTCCEEEEC
T ss_pred HHHhcCCCCCEEEEc
Confidence 455666789998887
No 39
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=93.53 E-value=0.058 Score=40.48 Aligned_cols=66 Identities=14% Similarity=0.257 Sum_probs=44.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|++++|++..|..+++.|.+. ++++++++...+...|+ . -.|+|++..+ ++.+
T Consensus 6 ~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~--~-----------i~g~pV~g~~-------------~l~~ 59 (141)
T 3nkl_A 6 KVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKT--T-----------MQGITIYRPK-------------YLER 59 (141)
T ss_dssp EEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTC--E-----------ETTEEEECGG-------------GHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCC--E-----------ecCeEEECHH-------------HHHH
Confidence 789999999999999999876 68999999743222221 1 1467776411 4445
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
.+++..+|.++++
T Consensus 60 ~~~~~~id~viia 72 (141)
T 3nkl_A 60 LIKKHCISTVLLA 72 (141)
T ss_dssp HHHHHTCCEEEEC
T ss_pred HHHHCCCCEEEEe
Confidence 5666677766554
No 40
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=93.53 E-value=0.19 Score=43.70 Aligned_cols=69 Identities=14% Similarity=0.165 Sum_probs=49.4
Q ss_pred CeEEEEcCCHHHHHHHHHHH-hC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLY-NS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~-~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.+|...+..|. +. ++++++|+.. + +...+++++++|+++.... ++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~-~----------~~~~~~~~~~~g~~~~~~~-------------~~ 58 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV-N----------QEAAQKVVEQYQLNATVYP-------------ND 58 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS-S----------HHHHHHHHHHTTCCCEEES-------------SH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC-C----------HHHHHHHHHHhCCCCeeeC-------------CH
Confidence 58999999999999999998 43 5788888763 1 1236788999996321111 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+-++|+++++
T Consensus 59 ~~ll~~~~~D~V~i~ 73 (344)
T 3mz0_A 59 DSLLADENVDAVLVT 73 (344)
T ss_dssp HHHHHCTTCCEEEEC
T ss_pred HHHhcCCCCCEEEEC
Confidence 455666788998887
No 41
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=93.44 E-value=0.073 Score=46.15 Aligned_cols=67 Identities=15% Similarity=0.251 Sum_probs=44.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.+|...+..|.+. +.++++|+... ... .+++|.+.|++ ++. ++
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~-~~~----------~~~~a~~~~~~~~~~---------------~~ 59 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRT-LES----------AQAFANKYHLPKAYD---------------KL 59 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSC-SST----------TCC---CCCCSCEES---------------CH
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCC-HHH----------HHHHHHHcCCCcccC---------------CH
Confidence 5899999999999988888765 47888887642 111 24567777876 332 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+-++|+++++
T Consensus 60 ~~ll~~~~~D~V~i~ 74 (329)
T 3evn_A 60 EDMLADESIDVIYVA 74 (329)
T ss_dssp HHHHTCTTCCEEEEC
T ss_pred HHHhcCCCCCEEEEC
Confidence 355556678888776
No 42
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=93.41 E-value=0.11 Score=46.13 Aligned_cols=67 Identities=7% Similarity=0.216 Sum_probs=50.1
Q ss_pred CeEEEEcCC-HHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTS-ISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~-~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+ ..+...+..|.+. +.++++|+... +...+++|.++|++++. ++
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~a~~~g~~~~~---------------~~ 56 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPN-----------EDVRERFGKEYGIPVFA---------------TL 56 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSC-----------HHHHHHHHHHHTCCEES---------------SH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCC-----------HHHHHHHHHHcCCCeEC---------------CH
Confidence 699999999 7888888888775 57888888641 12357788999998753 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
-+.+.+-++|+++++
T Consensus 57 ~ell~~~~vD~V~i~ 71 (387)
T 3moi_A 57 AEMMQHVQMDAVYIA 71 (387)
T ss_dssp HHHHHHSCCSEEEEC
T ss_pred HHHHcCCCCCEEEEc
Confidence 355666789999887
No 43
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=93.40 E-value=0.27 Score=42.59 Aligned_cols=67 Identities=7% Similarity=0.191 Sum_probs=45.8
Q ss_pred CeEEEEcCCHHHH-HHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCC-CcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAA-AILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS-IKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~-~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~g-Ipv~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+..+. ..+..|...++++++|+... .. ..+++|++++ .+++. ++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~-~~----------~~~~~a~~~~~~~~~~---------------~~ 58 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESD-SD----------NRAKFTSLFPSVPFAA---------------SA 58 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSC-TT----------SCHHHHHHSTTCCBCS---------------CH
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCC-HH----------HHHHHHHhcCCCcccC---------------CH
Confidence 6999999988775 56677766678999988742 11 1367888884 33321 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+-++|+++++
T Consensus 59 ~~ll~~~~~D~V~i~ 73 (336)
T 2p2s_A 59 EQLITDASIDLIACA 73 (336)
T ss_dssp HHHHTCTTCCEEEEC
T ss_pred HHHhhCCCCCEEEEe
Confidence 455666678988877
No 44
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.05 E-value=0.17 Score=41.15 Aligned_cols=49 Identities=4% Similarity=0.104 Sum_probs=37.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
|||+|+|.+.+|......|.+.|+++..++.+ + +..+.+++++.|+...
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r-~----------~~~~~~l~~~~g~~~~ 72 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSR-G----------PASLSSVTDRFGASVK 72 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTT-C----------GGGGHHHHHHHTTTEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC-C----------HHHHHHHHHHhCCCcc
Confidence 79999999999999999999999988664443 1 1235677888787653
No 45
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=93.05 E-value=0.14 Score=43.78 Aligned_cols=65 Identities=18% Similarity=0.110 Sum_probs=46.5
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.++.. .+..|.+. ++++++|+... +...+++|.++|++.+ . ++
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~a~~~~~~~~--~-------------~~ 60 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPN-----------KVKREKICSDYRIMPF--D-------------SI 60 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSC-----------HHHHHHHHHHHTCCBC--S-------------CH
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCC-----------HHHHHHHHHHcCCCCc--C-------------CH
Confidence 68999999999996 77777764 57888888641 1236788899998762 1 22
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+. ++|+++++
T Consensus 61 ~~ll~--~~D~V~i~ 73 (308)
T 3uuw_A 61 ESLAK--KCDCIFLH 73 (308)
T ss_dssp HHHHT--TCSEEEEC
T ss_pred HHHHh--cCCEEEEe
Confidence 23333 78988877
No 46
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=92.50 E-value=0.18 Score=45.11 Aligned_cols=67 Identities=15% Similarity=0.213 Sum_probs=48.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC---------CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS---------EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGK 70 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~---------~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~ 70 (258)
|||+++|++.+|..-+..|.+. +.++++|+.. + +.-.+++|+++|++ +|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~-~----------~~~a~~~a~~~~~~~~y~--------- 86 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ-D----------QAMAERHAAKLGAEKAYG--------- 86 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS-S----------HHHHHHHHHHHTCSEEES---------
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC-C----------HHHHHHHHHHcCCCeEEC---------
Confidence 6999999999998766666542 3578888763 1 12367899999996 332
Q ss_pred cccchHHHHHHHhcCCCcEEEEE
Q psy5230 71 YHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 71 ~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
++.+.|.+-++|+++++
T Consensus 87 ------d~~~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 87 ------DWRELVNDPQVDVVDIT 103 (412)
T ss_dssp ------SHHHHHHCTTCCEEEEC
T ss_pred ------CHHHHhcCCCCCEEEEC
Confidence 34466777889998877
No 47
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=92.38 E-value=0.92 Score=35.90 Aligned_cols=75 Identities=20% Similarity=0.185 Sum_probs=42.5
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHh-CC--CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE--EccCCCCCCcc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYN-SE--HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI--IQPISLKLNGK 70 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~-~~--~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv--~~~~~~~~~~~ 70 (258)
|||+|..+.+ +|-.+|+.+.+ .+ +++..-=|.+.. +....+..++.+++++||++ +.+..+..
T Consensus 35 mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~~----g~~~~~~a~~~l~~e~Gidis~h~sr~l~~--- 107 (180)
T 4egs_A 35 MRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAPE----GFPASSEAVEVLKKEYGIDISDHRAKSLRE--- 107 (180)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCCT----TCCCCHHHHHHHHHHHCCCCTTCCCCBCCS---
T ss_pred eEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCcC----CCCCChHHHHHHHHHcCcCcccCcccccCh---
Confidence 7999998884 55556665543 23 444333332211 12233345666778899987 33444432
Q ss_pred cccchHHHHHHHhcCCCcEEEEE
Q psy5230 71 YHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 71 ~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+..+ .+|++|++
T Consensus 108 ------~d~~-----~~DlIi~M 119 (180)
T 4egs_A 108 ------EDLK-----GADLVLAM 119 (180)
T ss_dssp ------HHHH-----HCSEEEES
T ss_pred ------hhCc-----CCCEEEEc
Confidence 2222 47999998
No 48
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=92.28 E-value=0.28 Score=44.99 Aligned_cols=67 Identities=13% Similarity=0.197 Sum_probs=47.9
Q ss_pred CeEEEEcC----CHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc---EEccCCCCCCccc
Q psy5230 1 MKIIFAGT----SISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK---IIQPISLKLNGKY 71 (258)
Q Consensus 1 mrI~f~Gs----~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp---v~~~~~~~~~~~~ 71 (258)
|||+++|. ..++...+..|.+. ++++++|+.. + +...+++|+++|+| ++.
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~-~----------~~~a~~~a~~~g~~~~~~~~---------- 98 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP-T----------LKSSLQTIEQLQLKHATGFD---------- 98 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS-C----------HHHHHHHHHHTTCTTCEEES----------
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC-C----------HHHHHHHHHHcCCCcceeeC----------
Confidence 58999999 78888888888875 5788888763 1 12357888999987 332
Q ss_pred ccchHHHHHHHhcCCCcEEEEE
Q psy5230 72 HKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 72 ~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
++.+.+.+-++|+++++
T Consensus 99 -----d~~ell~~~~vD~V~I~ 115 (479)
T 2nvw_A 99 -----SLESFAQYKDIDMIVVS 115 (479)
T ss_dssp -----CHHHHHHCTTCSEEEEC
T ss_pred -----CHHHHhcCCCCCEEEEc
Confidence 23345556678887777
No 49
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.22 E-value=0.28 Score=34.84 Aligned_cols=70 Identities=17% Similarity=0.124 Sum_probs=43.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|+|+++|.+.+|..+.+.|.+.| ++++.+--.+ .....+. +.++.++..+ +.+.. ++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~------------~~~~~~~-~~~~~~~~~d-~~~~~-------~~~ 64 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL------------AALAVLN-RMGVATKQVD-AKDEA-------GLA 64 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH------------HHHHHHH-TTTCEEEECC-TTCHH-------HHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH------------HHHHHHH-hCCCcEEEec-CCCHH-------HHH
Confidence 58999999999999999999998 7764432211 1123332 5677665433 32320 344
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.++ .+|++|.+
T Consensus 65 ~~~~--~~d~vi~~ 76 (118)
T 3ic5_A 65 KALG--GFDAVISA 76 (118)
T ss_dssp HHTT--TCSEEEEC
T ss_pred HHHc--CCCEEEEC
Confidence 4443 68988766
No 50
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=92.19 E-value=0.26 Score=42.92 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=49.0
Q ss_pred CeEEEEcCC-HHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcccccchH
Q psy5230 1 MKIIFAGTS-ISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGKYHKIAN 76 (258)
Q Consensus 1 mrI~f~Gs~-~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~~~~ 76 (258)
|||+++|.+ .++...+..|.+. +.++++|+.. + +...+++|+++|++ ++.
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~-~----------~~~~~~~a~~~~~~~~~~--------------- 72 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR-T----------RSHAEEFAKMVGNPAVFD--------------- 72 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS-S----------HHHHHHHHHHHSSCEEES---------------
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC-C----------HHHHHHHHHHhCCCcccC---------------
Confidence 589999999 6888888888876 4788888763 1 12357888998983 332
Q ss_pred HHHHHHhcCCCcEEEEE
Q psy5230 77 ETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 77 ~~~~~l~~~~~Dl~vv~ 93 (258)
++.+.|.+-++|+++++
T Consensus 73 ~~~~ll~~~~vD~V~i~ 89 (340)
T 1zh8_A 73 SYEELLESGLVDAVDLT 89 (340)
T ss_dssp CHHHHHHSSCCSEEEEC
T ss_pred CHHHHhcCCCCCEEEEe
Confidence 34456667789999887
No 51
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=92.08 E-value=0.29 Score=42.36 Aligned_cols=67 Identities=6% Similarity=0.079 Sum_probs=47.0
Q ss_pred CeEEEEcCCHHHHHHHHHHH-hC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGTSISAAAILDTLY-NS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~-~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~~~~~ 77 (258)
|||+++|.+.+|...++.|. +. ++++++|+... +...+++|.+.|++ ++. +
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~-----------~~~~~~~a~~~g~~~~~~---------------~ 62 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALD-----------SNQLEWAKNELGVETTYT---------------N 62 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSC-----------HHHHHHHHHTTCCSEEES---------------C
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCC-----------HHHHHHHHHHhCCCcccC---------------C
Confidence 58999999999999999988 54 57888887631 12356788888884 331 2
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.+.+.++|+++++
T Consensus 63 ~~~~l~~~~~D~V~i~ 78 (346)
T 3cea_A 63 YKDMIDTENIDAIFIV 78 (346)
T ss_dssp HHHHHTTSCCSEEEEC
T ss_pred HHHHhcCCCCCEEEEe
Confidence 2344555578988877
No 52
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.81 E-value=0.21 Score=45.59 Aligned_cols=72 Identities=13% Similarity=0.260 Sum_probs=54.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+++|.+.+|..+-+.|.+.||+++.|=.. +..+..++.+.+++++.-+. .++ ++++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d------------~~~~~~~~~~~~~~~i~Gd~-~~~--------~~L~ 62 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKD------------GDRLRELQDKYDLRVVNGHA-SHP--------DVLH 62 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESC------------HHHHHHHHHHSSCEEEESCT-TCH--------HHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECC------------HHHHHHHHHhcCcEEEEEcC-CCH--------HHHH
Confidence 99999999999999999998888888644221 23477788889999876433 233 7777
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
...-.++|++|++
T Consensus 63 ~Agi~~ad~~ia~ 75 (461)
T 4g65_A 63 EAGAQDADMLVAV 75 (461)
T ss_dssp HHTTTTCSEEEEC
T ss_pred hcCCCcCCEEEEE
Confidence 7666789988764
No 53
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=91.76 E-value=0.2 Score=44.45 Aligned_cols=49 Identities=12% Similarity=0.248 Sum_probs=38.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
+||+++|++ ||..-++++.+. ++++++|+.+. . .-.+++|+++|+|+|.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~-~----------~~a~~~a~~~gv~~~~ 58 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQG-S----------ARSRELAHAFGIPLYT 58 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCS-S----------HHHHHHHHHTTCCEES
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCC-H----------HHHHHHHHHhCCCEEC
Confidence 589999998 898778888765 47899998742 1 2368999999999864
No 54
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=91.65 E-value=0.32 Score=41.84 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=45.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+.+|...+..|.+. ++++++|+.. + +...+++|+++|++ ++. ++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~-~----------~~~~~~~~~~~~~~~~~~---------------~~ 55 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR-K----------LETAATFASRYQNIQLFD---------------QL 55 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS-S----------HHHHHHHGGGSSSCEEES---------------CH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC-C----------HHHHHHHHHHcCCCeEeC---------------CH
Confidence 6999999999999999999876 4778887753 1 12246777888863 321 22
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+ +.++|+++++
T Consensus 56 ~~~l-~~~~D~V~i~ 69 (325)
T 2ho3_A 56 EVFF-KSSFDLVYIA 69 (325)
T ss_dssp HHHH-TSSCSEEEEC
T ss_pred HHHh-CCCCCEEEEe
Confidence 2345 5578888777
No 55
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=91.60 E-value=0.23 Score=44.99 Aligned_cols=67 Identities=6% Similarity=0.177 Sum_probs=47.6
Q ss_pred CeEEEEcC----CHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc---EEccCCCCCCccc
Q psy5230 1 MKIIFAGT----SISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK---IIQPISLKLNGKY 71 (258)
Q Consensus 1 mrI~f~Gs----~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp---v~~~~~~~~~~~~ 71 (258)
|||+++|. ...+...+..|.+. ++++++|+... +...+++|+++|++ ++.
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~-----------~~~~~~~a~~~g~~~~~~~~---------- 79 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPK-----------IETSIATIQRLKLSNATAFP---------- 79 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSS-----------HHHHHHHHHHTTCTTCEEES----------
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCC-----------HHHHHHHHHHcCCCcceeeC----------
Confidence 48999999 77788888888876 57888887631 12357888999986 332
Q ss_pred ccchHHHHHHHhcCCCcEEEEE
Q psy5230 72 HKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 72 ~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
++.+.+.+-++|+++++
T Consensus 80 -----~~~~ll~~~~vD~V~i~ 96 (438)
T 3btv_A 80 -----TLESFASSSTIDMIVIA 96 (438)
T ss_dssp -----SHHHHHHCSSCSEEEEC
T ss_pred -----CHHHHhcCCCCCEEEEe
Confidence 33355666678888777
No 56
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=91.58 E-value=0.42 Score=41.92 Aligned_cols=66 Identities=9% Similarity=0.145 Sum_probs=47.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|||+++|.+.+|...+..|.+. ++++++|+.... . -.+.|.+.|++++. ++-
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~-----------~-~~~~a~~~g~~~~~---------------~~~ 58 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILA-----------E-KREAAAQKGLKIYE---------------SYE 58 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSH-----------H-HHHHHHTTTCCBCS---------------CHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCH-----------H-HHHHHHhcCCceeC---------------CHH
Confidence 4799999999999888888876 578888876311 1 13467778886542 334
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+.+-++|+++++
T Consensus 59 ~ll~~~~~D~V~i~ 72 (359)
T 3e18_A 59 AVLADEKVDAVLIA 72 (359)
T ss_dssp HHHHCTTCCEEEEC
T ss_pred HHhcCCCCCEEEEc
Confidence 55666788988877
No 57
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=91.54 E-value=0.45 Score=41.61 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=48.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|||+++|.+.++...++.|.+. ++++++|+... +...+++|.++|++. ...... ++.
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~-----------~~~~~~~a~~~~~~~-~~~~~~----------~~~ 64 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRS-----------LEKAKAFATANNYPE-STKIHG----------SYE 64 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSS-----------HHHHHHHHHHTTCCT-TCEEES----------SHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCC-----------HHHHHHHHHHhCCCC-CCeeeC----------CHH
Confidence 6999999999999999998875 47888887631 123578899998730 000011 333
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+.+-++|+++++
T Consensus 65 ~ll~~~~~D~V~i~ 78 (362)
T 1ydw_A 65 SLLEDPEIDALYVP 78 (362)
T ss_dssp HHHHCTTCCEEEEC
T ss_pred HHhcCCCCCEEEEc
Confidence 55666678988877
No 58
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.43 E-value=0.23 Score=37.39 Aligned_cols=66 Identities=18% Similarity=0.280 Sum_probs=46.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
+||+++|++..|....+.|.+.|++ +.|+.+. +....+++++.|+.+...+ ++.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~-----------~~~~~~~a~~~~~~~~~~~-------------~~~~ 76 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYK-VTVAGRN-----------IDHVRAFAEKYEYEYVLIN-------------DIDS 76 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCE-EEEEESC-----------HHHHHHHHHHHTCEEEECS-------------CHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCC-----------HHHHHHHHHHhCCceEeec-------------CHHH
Confidence 5899999999999999999888888 5666531 1235678888887654332 2223
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
.+. ++|++|++
T Consensus 77 ~~~--~~Divi~a 87 (144)
T 3oj0_A 77 LIK--NNDVIITA 87 (144)
T ss_dssp HHH--TCSEEEEC
T ss_pred Hhc--CCCEEEEe
Confidence 343 57988877
No 59
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.29 E-value=0.45 Score=42.83 Aligned_cols=71 Identities=17% Similarity=0.155 Sum_probs=46.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|+|+++|.+.+|..+.+.|.+.|++++.|=..|+ ..+.+.+.|++++.-+-. +. ++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~-------------~v~~~~~~g~~vi~GDat-~~--------~~L~ 62 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD-------------HIETLRKFGMKVFYGDAT-RM--------DLLE 62 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH-------------HHHHHHHTTCCCEESCTT-CH--------HHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH-------------HHHHHHhCCCeEEEcCCC-CH--------HHHH
Confidence 6899999999999999999999999876644332 233445678877653321 22 4444
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
...-.++|++|++
T Consensus 63 ~agi~~A~~viv~ 75 (413)
T 3l9w_A 63 SAGAAKAEVLINA 75 (413)
T ss_dssp HTTTTTCSEEEEC
T ss_pred hcCCCccCEEEEC
Confidence 4433455665555
No 60
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.28 E-value=0.65 Score=38.56 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=37.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
|||+|+|.+.+|......|.+.|++++.++.+. +..+..++.+.|+.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~-----------~~~~~~~~~~~g~~~~ 59 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT-----------EESARELAQKVEAEYT 59 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS-----------HHHHHHHHHHTTCEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC-----------HHHHHHHHHHcCCcee
Confidence 799999999999999999998898866666431 1235667777787654
No 61
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.22 E-value=0.38 Score=37.58 Aligned_cols=71 Identities=7% Similarity=0.061 Sum_probs=45.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
++|+++|.+.+|..+.+.|.+. |++++.+-..+ ..+ +.+.+.|+.++.-+ ..+. +.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~------------~~~-~~~~~~g~~~~~gd-~~~~--------~~l 97 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE------------EAA-QQHRSEGRNVISGD-ATDP--------DFW 97 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH------------HHH-HHHHHTTCCEEECC-TTCH--------HHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH------------HHH-HHHHHCCCCEEEcC-CCCH--------HHH
Confidence 5899999999999999999998 99886553321 112 33556788765432 2222 333
Q ss_pred HHH-hcCCCcEEEEE
Q psy5230 80 KLL-NKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l-~~~~~Dl~vv~ 93 (258)
+.. .-.++|++|++
T Consensus 98 ~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 98 ERILDTGHVKLVLLA 112 (183)
T ss_dssp HTBCSCCCCCEEEEC
T ss_pred HhccCCCCCCEEEEe
Confidence 332 22367887764
No 62
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=91.09 E-value=0.55 Score=41.20 Aligned_cols=67 Identities=7% Similarity=0.136 Sum_probs=47.2
Q ss_pred CeEEEEcCCHHHH-HHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCC-cEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAA-AILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI-KIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~-~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gI-pv~~~~~~~~~~~~~~~~~~~ 78 (258)
|||+++|.+..+. ..+..|...+.++++|+... +...+++|+++|+ ++|. ++
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~-----------~~~a~~~a~~~~~~~~~~---------------~~ 80 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKD-----------DALAAEFSAVYADARRIA---------------TA 80 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSC-----------HHHHHHHHHHSSSCCEES---------------CH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCC-----------HHHHHHHHHHcCCCcccC---------------CH
Confidence 5999999998775 34566666679999998741 1235788999884 3432 34
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
-+.|.+-++|+++++
T Consensus 81 ~~ll~~~~vD~V~I~ 95 (361)
T 3u3x_A 81 EEILEDENIGLIVSA 95 (361)
T ss_dssp HHHHTCTTCCEEEEC
T ss_pred HHHhcCCCCCEEEEe
Confidence 456666789999887
No 63
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=90.55 E-value=0.67 Score=40.49 Aligned_cols=68 Identities=13% Similarity=0.108 Sum_probs=46.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHh--------CCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYN--------SEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYH 72 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~--------~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 72 (258)
+||+++|++.+|..=+.++.. .+.++++|+.. +. .-.+++|+++|++-...
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-~~----------~~a~~~a~~~g~~~~y~---------- 84 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-NA----------GLAEARAGEFGFEKATA---------- 84 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC-------------TTHHHHHHHHTCSEEES----------
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-CH----------HHHHHHHHHhCCCeecC----------
Confidence 489999999998754444322 14689998864 22 12588999999973221
Q ss_pred cchHHHHHHHhcCCCcEEEEE
Q psy5230 73 KIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 73 ~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
++-+.|.+-++|+++++
T Consensus 85 ----d~~ell~~~~iDaV~Ia 101 (393)
T 4fb5_A 85 ----DWRALIADPEVDVVSVT 101 (393)
T ss_dssp ----CHHHHHHCTTCCEEEEC
T ss_pred ----CHHHHhcCCCCcEEEEC
Confidence 34466777889998887
No 64
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=90.53 E-value=0.38 Score=41.23 Aligned_cols=48 Identities=13% Similarity=0.029 Sum_probs=36.0
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||+++|.+.++.. .+..|.+. ++++++|+... . ...+++|++.|+++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~-~----------~~~~~~~~~~g~~~ 55 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT-R----------AKALPICESWRIPY 55 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS-C----------TTHHHHHHHHTCCB
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC-H----------HHHHHHHHHcCCCc
Confidence 58999999999986 78888764 57888887642 1 12567888888873
No 65
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.91 E-value=0.39 Score=36.51 Aligned_cols=30 Identities=20% Similarity=0.245 Sum_probs=26.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|+++|.+.+|..+.+.|.+.|++++.+-
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid 49 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVD 49 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 689999999999999999999998776543
No 66
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=89.76 E-value=0.47 Score=41.59 Aligned_cols=48 Identities=8% Similarity=0.158 Sum_probs=33.4
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
|||+|+..+. ...++.++|.++||++. |+|.++ ..+...+.|++++..
T Consensus 16 MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~-v~~~~~-------------~~~~~~~~G~~~~~~ 68 (398)
T 4fzr_A 16 MRILVIAGCSEGFVMPLVPLSWALRAAGHEVL-VAASEN-------------MGPTVTGAGLPFAPT 68 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEE-EEEEGG-------------GHHHHHHTTCCEEEE
T ss_pred eEEEEEcCCCcchHHHHHHHHHHHHHCCCEEE-EEcCHH-------------HHHHHHhCCCeeEec
Confidence 9999986553 33577889999999985 455321 356667788887653
No 67
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=89.71 E-value=1.2 Score=38.90 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=34.3
Q ss_pred CeEEEEcCCHHH-----HHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC
Q psy5230 1 MKIIFAGTSISA-----AAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI 63 (258)
Q Consensus 1 mrI~f~Gs~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~ 63 (258)
|||+|++.+..+ .++.++|.++||++. |+|.++ ..+...+.|++++...
T Consensus 21 MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~-v~~~~~-------------~~~~~~~~g~~~~~~~ 74 (412)
T 3otg_A 21 MRVLFASLGTHGHTYPLLPLATAARAAGHEVT-FATGEG-------------FAGTLRKLGFEPVATG 74 (412)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEE-EEECGG-------------GHHHHHHTTCEEEECC
T ss_pred eEEEEEcCCCcccHHHHHHHHHHHHHCCCEEE-EEccHH-------------HHHHHHhcCCceeecC
Confidence 999999877444 467788999999985 455321 3556677888887544
No 68
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.71 E-value=0.41 Score=39.63 Aligned_cols=47 Identities=26% Similarity=0.331 Sum_probs=34.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||+|+|.+.++......|.+.|+++ .|+.+ .+.....++.+.|+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v-~~~~~-----------~~~~~~~~~~~~g~~~ 50 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHEL-IISGS-----------SLERSKEIAEQLALPY 50 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEE-EEECS-----------SHHHHHHHHHHHTCCB
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeE-EEECC-----------CHHHHHHHHHHcCCEe
Confidence 89999999999999999998888654 45432 1123556666667654
No 69
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.62 E-value=0.47 Score=39.12 Aligned_cols=47 Identities=19% Similarity=0.209 Sum_probs=34.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC----cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH----NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~----~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||.|+|.+.++......|.++|+ ++. ++.+ .+..+.+++.+.|+.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~-~~~r-----------~~~~~~~~~~~~g~~~ 53 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQII-CSDL-----------NTANLKNASEKYGLTT 53 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEE-EECS-----------CHHHHHHHHHHHCCEE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEE-EEeC-----------CHHHHHHHHHHhCCEE
Confidence 699999999999999999999987 553 4432 1123566666778765
No 70
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=89.41 E-value=0.41 Score=41.92 Aligned_cols=67 Identities=18% Similarity=0.317 Sum_probs=44.7
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCC-CcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS-IKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~g-Ipv~~~~~~~~~~~~~~~~~~ 77 (258)
|||+++|.+.++.. .+..|.+. +.++++|+... . ...+++|++.+ .+++. +
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~----------~~~~~~a~~~~~~~~~~---------------~ 59 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSD-L----------ERARRVHRFISDIPVLD---------------N 59 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSS-H----------HHHGGGGGTSCSCCEES---------------S
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCC-H----------HHHHHHHHhcCCCcccC---------------C
Confidence 48999999999986 78888776 57888887641 1 12345566653 33431 3
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.+.+-++|+++++
T Consensus 60 ~~~ll~~~~vD~V~i~ 75 (359)
T 3m2t_A 60 VPAMLNQVPLDAVVMA 75 (359)
T ss_dssp HHHHHHHSCCSEEEEC
T ss_pred HHHHhcCCCCCEEEEc
Confidence 3455666678888877
No 71
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=89.09 E-value=1.3 Score=38.02 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=50.1
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHH--HHHHHCCCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVK--KYALKHSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~--~~A~~~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|+|+++|. +..|..+++.|++.|+++.++.-.+.. .+.... +.....++.+++.+ +.+.. .
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--------~~~~~~~~~~l~~~~v~~~~~D-l~d~~-------~ 74 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPR--------SPSKAKIFKALEDKGAIIVYGL-INEQE-------A 74 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCC--------CHHHHHHHHHHHHTTCEEEECC-TTCHH-------H
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCC--------ChhHHHHHHHHHhCCcEEEEee-cCCHH-------H
Confidence 58999986 789999999999999988766543211 001111 11235688877653 43331 5
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.+++.++|++|..
T Consensus 75 l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 75 MEKILKEHEIDIVVST 90 (346)
T ss_dssp HHHHHHHTTCCEEEEC
T ss_pred HHHHHhhCCCCEEEEC
Confidence 6667777789998766
No 72
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=89.08 E-value=1 Score=39.17 Aligned_cols=48 Identities=15% Similarity=0.217 Sum_probs=33.3
Q ss_pred CeEEEEcCCHHH-----HHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 1 MKIIFAGTSISA-----AAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 1 mrI~f~Gs~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
|||+|+..+..+ .++.++|.++||++. |++.+ ...+.....|++++..
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~-v~~~~-------------~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVL-IAAPP-------------ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEE-EEECH-------------HHHHHHHHBTCEEEEC
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEE-EecCh-------------hhHHHHHhCCCceeee
Confidence 999998766433 467788999999985 44432 2345667788887654
No 73
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=88.93 E-value=0.54 Score=42.41 Aligned_cols=69 Identities=13% Similarity=0.155 Sum_probs=47.2
Q ss_pred CeEEEEcCCHHHH-HHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE---EccCCCCCCcccccch
Q psy5230 1 MKIIFAGTSISAA-AILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI---IQPISLKLNGKYHKIA 75 (258)
Q Consensus 1 mrI~f~Gs~~fa~-~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv---~~~~~~~~~~~~~~~~ 75 (258)
|||+++|.+.++. ..+..|.+. ++++++|+.. + +...+++++++|++. ....+.
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~-~----------~~~~~~~a~~~g~~~~~~~~~~~~---------- 142 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG-N----------AEKAKIVAAEYGVDPRKIYDYSNF---------- 142 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS-C----------HHHHHHHHHHTTCCGGGEECSSSG----------
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC-C----------HHHHHHHHHHhCCCcccccccCCH----------
Confidence 6899999999997 788888765 4788888763 1 123577889999862 212221
Q ss_pred HHHHHHHhcCCCcEEEEE
Q psy5230 76 NETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 76 ~~~~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+-++|+++++
T Consensus 143 ---~~ll~~~~vD~V~ia 157 (433)
T 1h6d_A 143 ---DKIAKDPKIDAVYII 157 (433)
T ss_dssp ---GGGGGCTTCCEEEEC
T ss_pred ---HHHhcCCCCCEEEEc
Confidence 133455578888877
No 74
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=88.75 E-value=1.6 Score=38.19 Aligned_cols=78 Identities=9% Similarity=0.103 Sum_probs=48.2
Q ss_pred CeEEEEcCCHHH-----HHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCC-CCCCcc----
Q psy5230 1 MKIIFAGTSISA-----AAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPIS-LKLNGK---- 70 (258)
Q Consensus 1 mrI~f~Gs~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~-~~~~~~---- 70 (258)
|||+|+..+..| +++.++|.++||++. ++|.+. ..+...+.|++++.... ......
T Consensus 21 ~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~-v~~~~~-------------~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 86 (415)
T 3rsc_A 21 AHLLIVNVASHGLILPTLTVVTELVRRGHRVS-YVTAGG-------------FAEPVRAAGATVVPYQSEIIDADAAEVF 86 (415)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEE-EEECGG-------------GHHHHHHTTCEEEECCCSTTTCCHHHHH
T ss_pred CEEEEEeCCCccccccHHHHHHHHHHCCCEEE-EEeCHH-------------HHHHHHhcCCEEEeccccccccccchhh
Confidence 799999877544 677889999999875 445321 34566778888765331 110000
Q ss_pred ----------------cccchHHHHHHHhcCCCcEEEE
Q psy5230 71 ----------------YHKIANETHKLLNKIEFDIMIV 92 (258)
Q Consensus 71 ----------------~~~~~~~~~~~l~~~~~Dl~vv 92 (258)
.......+.+.+++.+||++|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~ 124 (415)
T 3rsc_A 87 GSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLY 124 (415)
T ss_dssp HSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEE
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 0001124556778899999885
No 75
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.65 E-value=2 Score=32.24 Aligned_cols=73 Identities=18% Similarity=0.196 Sum_probs=46.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHH--HCCCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYAL--KHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~--~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
.+|+++|.+.+|..+.+.|.+.|++++.|-..|. .....++. ..|+.++.-+- .+. +.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~-----------~~~~~~~~~~~~~~~~i~gd~-~~~--------~~ 63 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPE-----------DDIKQLEQRLGDNADVIPGDS-NDS--------SV 63 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCH-----------HHHHHHHHHHCTTCEEEESCT-TSH--------HH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCCh-----------HHHHHHHHhhcCCCeEEEcCC-CCH--------HH
Confidence 3699999999999999999999998865543221 01223332 44788876432 233 55
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
++...-.++|++|++
T Consensus 64 l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 64 LKKAGIDRCRAILAL 78 (153)
T ss_dssp HHHHTTTTCSEEEEC
T ss_pred HHHcChhhCCEEEEe
Confidence 554433478887665
No 76
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=88.64 E-value=2 Score=37.20 Aligned_cols=77 Identities=16% Similarity=0.169 Sum_probs=46.8
Q ss_pred eEEEEcCCHH-----HHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCC-CCCCc----cc
Q psy5230 2 KIIFAGTSIS-----AAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPIS-LKLNG----KY 71 (258)
Q Consensus 2 rI~f~Gs~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~-~~~~~----~~ 71 (258)
||+|+..+.. ..++.++|.++||++. |+|.+ ...+...+.|++++.... ..... .+
T Consensus 6 ~il~~~~~~~Ghv~~~~~La~~L~~~GheV~-v~~~~-------------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 71 (402)
T 3ia7_A 6 HILFANVQGHGHVYPSLGLVSELARRGHRIT-YVTTP-------------LFADEVKAAGAEVVLYKSEFDTFHVPEVVK 71 (402)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEE-EEECH-------------HHHHHHHHTTCEEEECCCGGGTSSSSSSSC
T ss_pred EEEEEeCCCCcccccHHHHHHHHHhCCCEEE-EEcCH-------------HHHHHHHHcCCEEEeccccccccccccccc
Confidence 9999877633 3456688888999985 45532 245666788988865331 00000 00
Q ss_pred ----------------ccchHHHHHHHhcCCCcEEEE
Q psy5230 72 ----------------HKIANETHKLLNKIEFDIMIV 92 (258)
Q Consensus 72 ----------------~~~~~~~~~~l~~~~~Dl~vv 92 (258)
.....++.+.+++.+||++|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~ 108 (402)
T 3ia7_A 72 QEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVY 108 (402)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 001225567788899999875
No 77
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=88.31 E-value=0.4 Score=41.53 Aligned_cols=72 Identities=24% Similarity=0.207 Sum_probs=47.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|||+++|.+.++...++.| ..+.++++|+...... ....+.+++.++|++.-... ++-+
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~-------~~~~~~~~~~~~~~~~~~~~-------------~~~~ 61 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEE-------DLSKLEKAISEMNIKPKKYN-------------NWWE 61 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTC-------CCHHHHHHHHTTTCCCEECS-------------SHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchh-------hHHHHHHHHHHcCCCCcccC-------------CHHH
Confidence 6999999988887777777 5568999998742211 11235677777887321111 3345
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
.|.+-++|+++++
T Consensus 62 ll~~~~vD~V~I~ 74 (337)
T 3ip3_A 62 MLEKEKPDILVIN 74 (337)
T ss_dssp HHHHHCCSEEEEC
T ss_pred HhcCCCCCEEEEe
Confidence 5666688998887
No 78
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=88.26 E-value=1.4 Score=37.72 Aligned_cols=75 Identities=8% Similarity=0.096 Sum_probs=46.4
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHH------CCCcEEccCCCCCCccccc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK------HSIKIIQPISLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~------~gIpv~~~~~~~~~~~~~~ 73 (258)
|+|++.| |+-.|..+.+.|++.|++|+++.-.+... ...+..+... .++.+++.+ +.+..
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~---- 92 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGH--------QYNLDEVKTLVSTEQWSRFCFIEGD-IRDLT---- 92 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--------HHHHHHHHHTSCHHHHTTEEEEECC-TTCHH----
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCc--------hhhhhhhhhccccccCCceEEEEcc-CCCHH----
Confidence 6899999 57799999999999999987765433211 1122222222 566666543 44441
Q ss_pred chHHHHHHHhcCCCcEEEEE
Q psy5230 74 IANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~ 93 (258)
.+.+.++ ++|++|-.
T Consensus 93 ---~~~~~~~--~~d~Vih~ 107 (351)
T 3ruf_A 93 ---TCEQVMK--GVDHVLHQ 107 (351)
T ss_dssp ---HHHHHTT--TCSEEEEC
T ss_pred ---HHHHHhc--CCCEEEEC
Confidence 3334444 78988755
No 79
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.03 E-value=1.1 Score=37.86 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=35.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC---cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH---NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~---~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
|||.|+|.+.+|......|.++|+ ++ .|+.+ .+..+.+++.+.|+.+.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V-~v~dr-----------~~~~~~~l~~~~gi~~~ 54 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRI-CVTNR-----------SLDKLDFFKEKCGVHTT 54 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGE-EEECS-----------SSHHHHHHHHTTCCEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeE-EEEeC-----------CHHHHHHHHHHcCCEEe
Confidence 689999999999999999999987 55 34332 11235667777787653
No 80
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=87.73 E-value=0.88 Score=37.10 Aligned_cols=84 Identities=13% Similarity=0.206 Sum_probs=53.3
Q ss_pred eEEEEcCCHHHHHHHHHHH--hCCCcEEEEEcCCCC-CCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 2 KIIFAGTSISAAAILDTLY--NSEHNIVLILTKPDL-HSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~--~~~~~i~~Vvt~pd~-~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
|++++|.+..|..+++.+. +.++++++++-..+. ..|+. . -+|+||+..+ ++
T Consensus 86 ~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~-~-----------i~GvpV~~~~-------------dL 140 (212)
T 3keo_A 86 NVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKT-T-----------EDGIPVYGIS-------------TI 140 (212)
T ss_dssp EEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCB-C-----------TTCCBEEEGG-------------GH
T ss_pred EEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCce-e-----------ECCeEEeCHH-------------HH
Confidence 7899999999999888742 235889999975333 33320 1 2478998532 55
Q ss_pred HHHHhcCCCcEEEEEeeCCCCCHHHHHHHHHHHH
Q psy5230 79 HKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLS 112 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~~I~~~dt~~~L~~kl~~~g 112 (258)
-+.+++.+.|.++.+- |.....++.++|.++|
T Consensus 141 ~~~v~~~~Id~vIIAv--Ps~~aq~v~d~lv~~G 172 (212)
T 3keo_A 141 NDHLIDSDIETAILTV--PSTEAQEVADILVKAG 172 (212)
T ss_dssp HHHC-CCSCCEEEECS--CGGGHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEec--CchhHHHHHHHHHHcC
Confidence 5778888899887662 2233444544444444
No 81
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=87.51 E-value=0.63 Score=41.33 Aligned_cols=48 Identities=6% Similarity=-0.047 Sum_probs=35.3
Q ss_pred CeEEEEcCCH---HHHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 1 MKIIFAGTSI---SAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 1 mrI~f~Gs~~---fa~~~L~~L~~~~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
|||+++|.+. ++..-+..+...+ ++++++|+.++. .-.+++|+++|+|
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~----------~~a~~~a~~~g~~ 64 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDP----------IRGSAFGEQLGVD 64 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSH----------HHHHHHHHHTTCC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCH----------HHHHHHHHHhCCC
Confidence 4899999998 8887777777654 778875543322 2367889999995
No 82
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=87.41 E-value=1.4 Score=38.49 Aligned_cols=46 Identities=11% Similarity=0.279 Sum_probs=30.8
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
|||+|+..+. ...++.++|.++||++. |+|. + ........|++++.
T Consensus 21 MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~-v~~~-~-------------~~~~~~~~G~~~~~ 71 (398)
T 3oti_A 21 MRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVL-IAVA-E-------------HADRAAAAGLEVVD 71 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEE-EEES-S-------------CHHHHHTTTCEEEE
T ss_pred CEEEEEcCCCcchHhHHHHHHHHHHHCCCEEE-Eecc-c-------------hHHHHHhCCCeeEe
Confidence 8999997653 34677888999999985 4553 1 13445566776654
No 83
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=87.15 E-value=0.72 Score=41.29 Aligned_cols=48 Identities=6% Similarity=-0.033 Sum_probs=33.9
Q ss_pred CeEEEEcCCH---HHHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 1 MKIIFAGTSI---SAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 1 mrI~f~Gs~~---fa~~~L~~L~~~~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
|||+++|.+. ++..-+..+...+ +++++.|+.++. ...+++|+++|+|
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~----------~~a~~~a~~~g~~ 89 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTP----------EKAEASGRELGLD 89 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSH----------HHHHHHHHHHTCC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCH----------HHHHHHHHHcCCC
Confidence 4899999998 8877777777664 678764443321 2367889999986
No 84
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=86.97 E-value=0.94 Score=39.36 Aligned_cols=65 Identities=18% Similarity=0.215 Sum_probs=44.0
Q ss_pred CeEEEEcCCHHHH-HHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHH---CCCcEEccCCCCCCcccccch
Q psy5230 1 MKIIFAGTSISAA-AILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALK---HSIKIIQPISLKLNGKYHKIA 75 (258)
Q Consensus 1 mrI~f~Gs~~fa~-~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~---~gIpv~~~~~~~~~~~~~~~~ 75 (258)
|||+++|.+.++. ..+..|.+. ++++++|+... + .+++|.+ .+++++.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-----~--------~~~~a~~~~~~~~~~~~-------------- 55 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-----V--------NEKAAAPFKEKGVNFTA-------------- 55 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-----C--------CHHHHHHHHTTTCEEES--------------
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-----H--------HHHHHHhhCCCCCeEEC--------------
Confidence 5899999999998 456666554 57898988742 1 2567777 4555542
Q ss_pred HHHHHHHhcCCCcEEEEE
Q psy5230 76 NETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 76 ~~~~~~l~~~~~Dl~vv~ 93 (258)
++-+.+.+-++|+++++
T Consensus 56 -~~~~ll~~~~~D~V~i~ 72 (349)
T 3i23_A 56 -DLNELLTDPEIELITIC 72 (349)
T ss_dssp -CTHHHHSCTTCCEEEEC
T ss_pred -CHHHHhcCCCCCEEEEe
Confidence 22245556678988877
No 85
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=86.74 E-value=0.53 Score=40.43 Aligned_cols=47 Identities=19% Similarity=0.208 Sum_probs=34.3
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||+|+|.+.++.. .++.|.+. +++++ |+.. + +...+++|.+.|++.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~-~----------~~~~~~~a~~~g~~~ 51 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR-N----------PKVLGTLATRYRVSA 51 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS-C----------HHHHHHHHHHTTCCC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC-C----------HHHHHHHHHHcCCCc
Confidence 59999999999985 78888765 46776 5542 2 123567889999873
No 86
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=86.57 E-value=1.3 Score=36.50 Aligned_cols=48 Identities=19% Similarity=0.234 Sum_probs=35.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
|||+|+|.+.+|......|.+.| +++ .++.+ .+..+.+++.+.|+.+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~r-----------~~~~~~~~~~~~g~~~~ 49 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRI-YIANR-----------GAEKRERLEKELGVETS 49 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEE-EEECS-----------SHHHHHHHHHHTCCEEE
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeE-EEECC-----------CHHHHHHHHHhcCCEEe
Confidence 89999999999999999999888 766 34432 11235566666787754
No 87
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=86.56 E-value=2.2 Score=37.03 Aligned_cols=32 Identities=6% Similarity=0.109 Sum_probs=26.0
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+++|.+.++.. .+..|.+. +.++++|+..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~ 41 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS 41 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 58999999999987 67777765 5788888864
No 88
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=86.40 E-value=1.9 Score=37.01 Aligned_cols=77 Identities=8% Similarity=0.041 Sum_probs=46.5
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|+|++.| ++-.|..+.+.|++.|++|+++.-.+++.. .....+....++.+++. ++.+.. .+.
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~~~~~~~-Dl~d~~-------~~~ 73 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVP--------SLFETARVADGMQSEIG-DIRDQN-------KLL 73 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSS--------CHHHHTTTTTTSEEEEC-CTTCHH-------HHH
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccc--------hhhHhhccCCceEEEEc-cccCHH-------HHH
Confidence 6899998 567999999999999998877654332211 11111111235655544 344431 444
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.++...+|++|-.
T Consensus 74 ~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 74 ESIREFQPEIVFHM 87 (357)
T ss_dssp HHHHHHCCSEEEEC
T ss_pred HHHHhcCCCEEEEC
Confidence 55555578988765
No 89
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=86.35 E-value=0.5 Score=41.30 Aligned_cols=68 Identities=16% Similarity=0.179 Sum_probs=47.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--------CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS--------EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYH 72 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~--------~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 72 (258)
+||+++|.+.+|..-+..|.+. +.++++|+.. + +...+++|+++|++-...
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-~----------~~~a~~~a~~~g~~~~~~---------- 65 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-D----------AEAVRAAAGKLGWSTTET---------- 65 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-S----------HHHHHHHHHHHTCSEEES----------
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-C----------HHHHHHHHHHcCCCcccC----------
Confidence 4899999999987666666543 1367787753 2 123688999999974321
Q ss_pred cchHHHHHHHhcCCCcEEEEE
Q psy5230 73 KIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 73 ~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
++-+.|.+-++|+++++
T Consensus 66 ----d~~~ll~~~~iDaV~I~ 82 (390)
T 4h3v_A 66 ----DWRTLLERDDVQLVDVC 82 (390)
T ss_dssp ----CHHHHTTCTTCSEEEEC
T ss_pred ----CHHHHhcCCCCCEEEEe
Confidence 34466777789998887
No 90
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=85.91 E-value=5 Score=34.80 Aligned_cols=31 Identities=16% Similarity=0.516 Sum_probs=26.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHH-hCCCcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLY-NSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~-~~~~~i~~Vvt 31 (258)
|+|++.| ++-.|..+.+.|+ +.|++|+++.-
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEec
Confidence 8999998 5678999999999 99998876643
No 91
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.68 E-value=1.1 Score=35.38 Aligned_cols=67 Identities=21% Similarity=0.267 Sum_probs=44.5
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|||+++| |+..|..+.+.|+++|++++++.-.+ +....+. .++.+++.+ +.+. +.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~------------~~~~~~~--~~~~~~~~D-~~d~--------~~- 56 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA------------GKITQTH--KDINILQKD-IFDL--------TL- 56 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS------------HHHHHHC--SSSEEEECC-GGGC--------CH-
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc------------hhhhhcc--CCCeEEecc-ccCh--------hh-
Confidence 9999999 67899999999999999887664322 1223322 577776554 3333 22
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+. .+|++|..
T Consensus 57 ~~~~--~~d~vi~~ 68 (221)
T 3ew7_A 57 SDLS--DQNVVVDA 68 (221)
T ss_dssp HHHT--TCSEEEEC
T ss_pred hhhc--CCCEEEEC
Confidence 4443 57988766
No 92
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=85.45 E-value=1.8 Score=39.98 Aligned_cols=140 Identities=13% Similarity=0.056 Sum_probs=59.2
Q ss_pred eEEEEcCCHHHHHHHHHH-HhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 2 KIIFAGTSISAAAILDTL-YNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L-~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|++++|.+..+...-+.| .+.|.+++.+.|.-.. ....+++...+.+-.++-.++ .. ++.+
T Consensus 305 rv~i~gd~~~~~~l~~~L~~elGm~vv~~gt~~~~--------~~~~~~~~l~~~~~~v~~~~D--~~--------el~~ 366 (511)
T 2xdq_B 305 KAVVFGDNTHAAAMTKILSREMGIHVVWAGTYCKY--------DADWFRAEVAGFCDEVLITDD--HT--------VVGD 366 (511)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHCCEEEEEEESCGG--------GHHHHHHHHTTTSSEEEECCC--HH--------HHHH
T ss_pred EEEEEcCChHHHHHHHHHHHhCCCEEEEeecCCCC--------chHHHHHHHHhcCCcEEEeCC--HH--------HHHH
Confidence 789999999999988889 6889999887775211 111233333333322322221 11 7778
Q ss_pred HHhcCCCcEEEEE-------------------eeC--C---C--C-----CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy5230 81 LLNKIEFDIMIVM-------------------GIL--P---E--D-----TSLTLQNKLEKLSKILIIDTIKKIEYDMTK 129 (258)
Q Consensus 81 ~l~~~~~Dl~vv~-------------------~I~--~---~--d-----t~~~L~~kl~~~g~~ll~~~l~~l~~~~g~ 129 (258)
.+++.+||++|.- ||. . . . -+..|.+.+...-..-+.+.|-++-. +.
T Consensus 367 ~i~~~~pDl~ig~~~~r~~a~k~gip~~~i~~Pi~~d~~~~~~~p~~Gy~Ga~~l~~~i~n~l~~~~~~~l~~~f~--~~ 444 (511)
T 2xdq_B 367 AIARVEPAAIFGTQMERHVGKRLNIPCGVIAAPIHIQDFPVGYRPFLGYEGTNQLVDLIYNSFTLGMEDHLLEIFG--GH 444 (511)
T ss_dssp HHHHHCCSEEEECHHHHHHHHHHTCCEEECSSSCCGGGSCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--C-
T ss_pred HHHhcCCCEEEeccchHHHHHhcCCCeEeccCcchhhccccccCCceehHHHHHHHHHHHHHHHhhhhHHHHHHhc--cc
Confidence 8999999999864 332 0 0 0 12234444444333333333433333 31
Q ss_pred ccccCCCCCCCCcCCCCCcccccccccccHHHHHHHHhhc
Q psy5230 130 LFFKPQSNIGESYAPLIKKNEAVLDWSLSAKTIMRKINAF 169 (258)
Q Consensus 130 ~~~~~Q~~~~atya~k~~~~d~~IdW~~~a~~I~~~iRA~ 169 (258)
.--++..+....+..+.|+..|+.-.++++.+
T Consensus 445 --------~~~~~~~~~~~~~~~~~W~~~a~~~l~~~p~~ 476 (511)
T 2xdq_B 445 --------DTKAVIHKGLSADSDLTWTAAGLAELNKIPGF 476 (511)
T ss_dssp ----------------------------------------
T ss_pred --------cchhhccCCcCcCCCCCCCHHHHHHHhhCCHH
Confidence 11133444555677889998888777766554
No 93
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=85.43 E-value=1.8 Score=38.94 Aligned_cols=71 Identities=14% Similarity=0.217 Sum_probs=46.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHH---HCCCc---EEccCCCCCCccccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYAL---KHSIK---IIQPISLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~---~~gIp---v~~~~~~~~~~~~~~ 73 (258)
|||+++|.+.++..-+..|.+. +.++++|+... . ...+++|+ ++|+| ++.. ...
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~-~----------~~~~~~a~~~~~~g~~~~~~~~~---~~~----- 81 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPD-P----------YMVGRAQEILKKNGKKPAKVFGN---GND----- 81 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSC-H----------HHHHHHHHHHHHTTCCCCEEECS---STT-----
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCC-H----------HHHHHHHHHHHhcCCCCCceecc---CCC-----
Confidence 5899999999999888888875 57888887631 1 12345554 56753 3321 011
Q ss_pred chHHHHHHHhcCCCcEEEEE
Q psy5230 74 IANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~ 93 (258)
++.+.|.+-++|+++++
T Consensus 82 ---~~~~ll~~~~vD~V~i~ 98 (444)
T 2ixa_A 82 ---DYKNMLKDKNIDAVFVS 98 (444)
T ss_dssp ---THHHHTTCTTCCEEEEC
T ss_pred ---CHHHHhcCCCCCEEEEc
Confidence 34456666789988887
No 94
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=84.80 E-value=4.2 Score=34.45 Aligned_cols=77 Identities=6% Similarity=0.060 Sum_probs=47.0
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHH--CCCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK--HSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~--~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|+|++.| ++-.|..+.+.|+++|++++++.-.+.+ ....+..+... .++.+++. ++.+.. .
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~-Dl~d~~-------~ 69 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS--------KREAIARIEKITGKTPAFHET-DVSDER-------A 69 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS--------CTHHHHHHHHHHSCCCEEECC-CTTCHH-------H
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc--------hHHHHHHHHhhcCCCceEEEe-ecCCHH-------H
Confidence 6899998 5679999999999999998665432221 11123333322 24555543 344441 4
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.++...+|++|-.
T Consensus 70 ~~~~~~~~~~d~vih~ 85 (341)
T 3enk_A 70 LARIFDAHPITAAIHF 85 (341)
T ss_dssp HHHHHHHSCCCEEEEC
T ss_pred HHHHHhccCCcEEEEC
Confidence 5556666689988765
No 95
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=84.65 E-value=2.9 Score=36.41 Aligned_cols=64 Identities=19% Similarity=0.237 Sum_probs=42.5
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHC-CCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH-SIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~-gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|||+++|.+.++.. .+..|.+. ++++++|+... + ...+.+. +++++. +
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-------------~-~~~~~~~~~~~~~~---------------~ 56 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSR-------------T-EEVKRDFPDAEVVH---------------E 56 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSC-------------H-HHHHHHCTTSEEES---------------S
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCC-------------H-HHHHhhCCCCceEC---------------C
Confidence 48999999999987 56666554 57888887631 1 2355565 455542 2
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+-+.+.+-++|+++++
T Consensus 57 ~~~ll~~~~vD~V~i~ 72 (358)
T 3gdo_A 57 LEEITNDPAIELVIVT 72 (358)
T ss_dssp THHHHTCTTCCEEEEC
T ss_pred HHHHhcCCCCCEEEEc
Confidence 2345666678988877
No 96
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=84.57 E-value=1.4 Score=36.89 Aligned_cols=33 Identities=24% Similarity=0.507 Sum_probs=27.7
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
|||++.|. +-.|..+.+.|+++||+|.++.-.|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 99999997 5679999999999999997765433
No 97
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=84.49 E-value=1.7 Score=34.57 Aligned_cols=69 Identities=16% Similarity=0.265 Sum_probs=43.6
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|||+++| |+-.|..+.+.|++.|++++++.-.+++.. .+ ..++.+++.+ +.+.. ++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~----------~~~~~~~~~D-l~d~~-------~~~ 62 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK----IE----------NEHLKVKKAD-VSSLD-------EVC 62 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC----CC----------CTTEEEECCC-TTCHH-------HHH
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch----hc----------cCceEEEEec-CCCHH-------HHH
Confidence 6899999 567899999999999988876644332211 00 1356665543 33431 444
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.++ ++|++|..
T Consensus 63 ~~~~--~~d~vi~~ 74 (227)
T 3dhn_A 63 EVCK--GADAVISA 74 (227)
T ss_dssp HHHT--TCSEEEEC
T ss_pred HHhc--CCCEEEEe
Confidence 5554 58988766
No 98
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=84.31 E-value=2.1 Score=38.16 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=30.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
|||+++|++..+....+++.+.|++++.+-+.|+
T Consensus 20 ~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 20 QKILLLGSGELGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 5899999999999999999999999988776654
No 99
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=84.19 E-value=4.4 Score=34.09 Aligned_cols=30 Identities=17% Similarity=0.216 Sum_probs=25.7
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 2 KIIFAG-TSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
+|+++| |+..|..+.+.|++.|+++.++.-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R 43 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTR 43 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEEC
Confidence 799998 678999999999999998876543
No 100
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=83.67 E-value=11 Score=32.00 Aligned_cols=32 Identities=13% Similarity=0.165 Sum_probs=26.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|+|++.|. +-.|..+.+.|++.|++|+++.-.
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999986 679999999999999999877543
No 101
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=83.56 E-value=5.4 Score=32.92 Aligned_cols=108 Identities=8% Similarity=0.074 Sum_probs=56.0
Q ss_pred CeEEEEcCC--HHHHHHHHHHHhCCCcEEEEEcC-CCCCCC-CCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchH
Q psy5230 1 MKIIFAGTS--ISAAAILDTLYNSEHNIVLILTK-PDLHSG-RGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIAN 76 (258)
Q Consensus 1 mrI~f~Gs~--~fa~~~L~~L~~~~~~i~~Vvt~-pd~~~g-r~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~ 76 (258)
||++..=|+ +.+. ++-.+.++|++++++++. |....+ +........++..|+..|||.+..+--.... ....
T Consensus 5 MKvvvl~SGGkDSs~-al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~---~e~e 80 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNY-ALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKE---KEVE 80 (237)
T ss_dssp SEEEEECCSSHHHHH-HHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC---------CHH
T ss_pred CEEEEEecCcHHHHH-HHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCch---HHHH
Confidence 677766333 4444 444566779999988653 322110 0011233568899999999987533110000 1122
Q ss_pred HHHHHHhcCCCcEEEEEeeCCCCCHHHHHHHHHHHH
Q psy5230 77 ETHKLLNKIEFDIMIVMGILPEDTSLTLQNKLEKLS 112 (258)
Q Consensus 77 ~~~~~l~~~~~Dl~vv~~I~~~dt~~~L~~kl~~~g 112 (258)
++.+.++....+.+++-+|.-++-..-..+.+..+|
T Consensus 81 ~l~~~l~~~~i~~vv~Gdi~s~yqr~r~e~vc~~~g 116 (237)
T 3rjz_A 81 DLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELG 116 (237)
T ss_dssp HHHHHHTTSCCSEEECC---CCSHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCcEEEECCcchHHHHHHHHHHHHHcC
Confidence 677888888888776667764433333333344443
No 102
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=82.94 E-value=7.4 Score=31.72 Aligned_cols=49 Identities=8% Similarity=0.221 Sum_probs=36.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
++|+++|.+..|....+.|++.|.++. ||.+ + ....+.+++.+.++.++
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~Vt-Vvap-~---------~~~~l~~l~~~~~i~~i 80 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAIT-VVAP-T---------VSAEINEWEAKGQLRVK 80 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEE-EECS-S---------CCHHHHHHHHTTSCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE-EECC-C---------CCHHHHHHHHcCCcEEE
Confidence 589999999999999999999988774 5542 2 11346777777777664
No 103
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=82.90 E-value=1.3 Score=38.43 Aligned_cols=32 Identities=6% Similarity=0.213 Sum_probs=27.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~-~~~i~~Vvt~ 32 (258)
|+|+++| |+-.|..+.+.|+++ |++|+++.-.
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 6899999 678999999999998 8998777543
No 104
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=82.76 E-value=2.1 Score=36.18 Aligned_cols=29 Identities=10% Similarity=0.181 Sum_probs=25.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||.|+|.+.++...-..|.+.||++..+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~ 44 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVY 44 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 58999999999999999999999987544
No 105
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=82.61 E-value=4 Score=34.22 Aligned_cols=31 Identities=16% Similarity=0.388 Sum_probs=26.6
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||++.| |+-.|..+.+.|+++|++|.++.-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTR 34 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeC
Confidence 6899999 678999999999999998876654
No 106
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=82.52 E-value=3.9 Score=35.12 Aligned_cols=49 Identities=8% Similarity=0.074 Sum_probs=36.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-C-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYN-S-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~-~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||+++|++..|...++.|.+ . +.++++|+..... ++.+++|+++|++.
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~----------~~~~~~a~~~g~~~ 55 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAA----------SDGLARAQRMGVTT 55 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTT----------CHHHHHHHHTTCCE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChh----------hhHHHHHHHcCCCc
Confidence 489999999999999999866 3 4677777764211 12467888888874
No 107
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=82.37 E-value=1.2 Score=35.38 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=27.8
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|||+++| ++..|..+.+.|+++|++++++.-.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 9999999 7789999999999999998776543
No 108
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=82.36 E-value=1.9 Score=39.88 Aligned_cols=76 Identities=16% Similarity=0.038 Sum_probs=51.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHC----CCcEEccCCCCCCcccccchHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH----SIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~----gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|++++|.+..+....+.|.+.|.+++.|++.-.. +.....++++.... +..++.-.+. . +
T Consensus 362 rv~i~gd~~~~~~la~~L~ElGm~vv~v~~~~~~------~~~~~~~~~ll~~~~~~~~~~v~~~~d~--~--------~ 425 (519)
T 1qgu_B 362 KFGLYGDPDFVMGLTRFLLELGCEPTVILSHNAN------KRWQKAMNKMLDASPYGRDSEVFINCDL--W--------H 425 (519)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEEEEEEETTCC------HHHHHHHHHHHHHSTTCTTCEEEESCCH--H--------H
T ss_pred EEEEECCchHHHHHHHHHHHCCCEEEEEEeCCCC------HHHHHHHHHHHHhcCCCCCCEEEECCCH--H--------H
Confidence 7899999999999889999999999999985321 11123355556654 3344432221 1 6
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.+++.+||++|.-
T Consensus 426 l~~~i~~~~pDLiig~ 441 (519)
T 1qgu_B 426 FRSLMFTRQPDFMIGN 441 (519)
T ss_dssp HHHHHHHHCCSEEEEC
T ss_pred HHHHHhhcCCCEEEEC
Confidence 7788888899999753
No 109
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=82.12 E-value=2 Score=34.77 Aligned_cols=69 Identities=17% Similarity=0.084 Sum_probs=43.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
++|+++|.+.+|..+.+.|.+.|+ ++ |+.. + +..+..+. .|+.++.-+- .+. +.++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~-vid~-~----------~~~~~~~~--~~~~~i~gd~-~~~--------~~l~ 65 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FV-LAED-E----------NVRKKVLR--SGANFVHGDP-TRV--------SDLE 65 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EE-EESC-G----------GGHHHHHH--TTCEEEESCT-TCH--------HHHH
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EE-EEEC-C----------HHHHHHHh--cCCeEEEcCC-CCH--------HHHH
Confidence 589999999999999999988877 54 4432 1 11233433 7787765432 233 4444
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
...-.++|.+|++
T Consensus 66 ~a~i~~ad~vi~~ 78 (234)
T 2aef_A 66 KANVRGARAVIVD 78 (234)
T ss_dssp HTTCTTCSEEEEC
T ss_pred hcCcchhcEEEEc
Confidence 4433467877665
No 110
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=82.02 E-value=1.6 Score=38.16 Aligned_cols=35 Identities=6% Similarity=0.088 Sum_probs=30.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDL 35 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 35 (258)
|||+++|++..+....+++.+.|++++.+-+.|+.
T Consensus 12 ~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~ 46 (391)
T 1kjq_A 12 TRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADA 46 (391)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCC
Confidence 69999999999999999999999998877766554
No 111
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=82.01 E-value=1 Score=39.09 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=24.0
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC--CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS--EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~--~~~i~~Vvt~ 32 (258)
|||+++|.+.++.. .+..++.. ++++++|+..
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~ 37 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRR 37 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECS
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcC
Confidence 58999999999986 55524332 5789888875
No 112
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=81.98 E-value=2.2 Score=34.79 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=28.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|||+|+|.+.+|....+.|.+.++++++|+..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~ 32 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDV 32 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEec
Confidence 89999999999999999998878999888764
No 113
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=81.92 E-value=2 Score=38.94 Aligned_cols=76 Identities=11% Similarity=0.054 Sum_probs=51.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCC---CcEEccCCCCCCcccccchHHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS---IKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~g---Ipv~~~~~~~~~~~~~~~~~~~ 78 (258)
|++++|.+..+....+.|.+.|.+++.|+|.-.. +.....++++..+.+ ..++.-.+. . ++
T Consensus 314 rv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~------~~~~~~~~~ll~~~~~~~~~v~~~~d~--~--------~l 377 (458)
T 1mio_B 314 KVALLGDPDEIIALSKFIIELGAIPKYVVTGTPG------MKFQKEIDAMLAEAGIEGSKVKVEGDF--F--------DV 377 (458)
T ss_dssp EEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCC------HHHHHHHHHHHHTTTCCSCEEEESCBH--H--------HH
T ss_pred EEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCC------HHHHHHHHHHHHhcCCCCCEEEECCCH--H--------HH
Confidence 7899999999999999999889999999885321 111223455555543 234332121 1 67
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.+++.+||+++.-
T Consensus 378 ~~~i~~~~pDl~ig~ 392 (458)
T 1mio_B 378 HQWIKNEGVDLLISN 392 (458)
T ss_dssp HHHHHHSCCSEEEES
T ss_pred HHHHHhcCCCEEEeC
Confidence 788899999999854
No 114
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=81.42 E-value=3.1 Score=35.81 Aligned_cols=32 Identities=9% Similarity=0.238 Sum_probs=27.1
Q ss_pred CeEEEEcCCHHHH-HHHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAA-AILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~-~~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+++|.+.++. ..+..|.+. +.++++|+..
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~ 59 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKNANFKLVATASR 59 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECS
T ss_pred ceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeC
Confidence 5899999999998 688888876 5889898864
No 115
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=81.39 E-value=5.3 Score=33.78 Aligned_cols=78 Identities=6% Similarity=0.143 Sum_probs=45.7
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|+|++.| |+-.|..+.+.|++.|++|+++.-.. +.. ....+..+....++.++.. ++.+.. .+.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~------~~~~~~~l~~~~~~~~~~~-Dl~d~~-------~~~ 66 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLS-RKG------ATDNLHWLSSLGNFEFVHG-DIRNKN-------DVT 66 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC-STT------HHHHHHHHHTTCCCEEEEC-CTTCHH-------HHH
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCC-ccC------chhhhhhhccCCceEEEEc-CCCCHH-------HHH
Confidence 5899998 67789999999999999887664211 000 0011222222223666544 344431 444
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.++...+|++|-.
T Consensus 67 ~~~~~~~~d~vih~ 80 (347)
T 1orr_A 67 RLITKYMPDSCFHL 80 (347)
T ss_dssp HHHHHHCCSEEEEC
T ss_pred HHHhccCCCEEEEC
Confidence 55655578988765
No 116
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=81.05 E-value=9.5 Score=32.15 Aligned_cols=77 Identities=10% Similarity=0.184 Sum_probs=45.1
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHH--CCCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALK--HSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~--~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|+|++.|. +-.|..+.+.|+++|++++++...... ....+..+... .++.++.. ++.+.. .
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-Dl~~~~-------~ 64 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNS--------KRSVLPVIERLGGKHPTFVEG-DIRNEA-------L 64 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC--------CTTHHHHHHHHHTSCCEEEEC-CTTCHH-------H
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCc--------chhHHHHHHhhcCCcceEEEc-cCCCHH-------H
Confidence 89999975 568999999999999988765321110 11123333221 24555443 344431 3
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.++...+|++|-.
T Consensus 65 ~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 65 MTEILHDHAIDTVIHF 80 (338)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHhhccCCCEEEEC
Confidence 4455555679988754
No 117
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=80.83 E-value=0.53 Score=40.27 Aligned_cols=32 Identities=9% Similarity=0.186 Sum_probs=27.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+|+|.+.++...++.|.+. ++++++|+..
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~ 43 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASS 43 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC
Confidence 6899999999999889999886 5788888764
No 118
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=80.56 E-value=3 Score=35.28 Aligned_cols=78 Identities=6% Similarity=0.065 Sum_probs=46.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|||++.|. +-.|..+.+.|++.|++|+++.-.+++. ....+..+....++.++.. ++.+.. .+.
T Consensus 15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~-Dl~d~~-------~~~ 79 (335)
T 1rpn_A 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD-------TRWRLRELGIEGDIQYEDG-DMADAC-------SVQ 79 (335)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC-------CCHHHHHTTCGGGEEEEEC-CTTCHH-------HHH
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccc-------cccchhhccccCceEEEEC-CCCCHH-------HHH
Confidence 78999985 5689999999999999887765433211 0111222111234555443 343431 444
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.++...+|++|-.
T Consensus 80 ~~~~~~~~d~Vih~ 93 (335)
T 1rpn_A 80 RAVIKAQPQEVYNL 93 (335)
T ss_dssp HHHHHHCCSEEEEC
T ss_pred HHHHHcCCCEEEEC
Confidence 55665678988765
No 119
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=80.55 E-value=5.7 Score=33.56 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=27.5
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
|+|++.| ++-.|..+.+.|++.|++|++++-.+
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 5899999 67789999999999999987765443
No 120
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=80.53 E-value=7 Score=33.11 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=47.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHH--HCCCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYAL--KHSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~--~~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|+|++.| ++-.|..+.+.|++.|++|+++.-.+.. .|........+.++.. ..++.++.. ++.+.. .
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~-------~ 72 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNA--FRGGGSLPESLRRVQELTGRSVEFEEM-DILDQG-------A 72 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSS--CBCSSSSBHHHHHHHHHHTCCCEEEEC-CTTCHH-------H
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcc--cccccccHHHHHHHHhccCCceEEEEC-CCCCHH-------H
Confidence 5899997 5678999999999999998766432211 1110001122333332 235655544 344431 3
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.++...+|++|-.
T Consensus 73 ~~~~~~~~~~d~vih~ 88 (348)
T 1ek6_A 73 LQRLFKKYSFMAVIHF 88 (348)
T ss_dssp HHHHHHHCCEEEEEEC
T ss_pred HHHHHHhcCCCEEEEC
Confidence 4455555578887755
No 121
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=80.22 E-value=1.9 Score=37.77 Aligned_cols=67 Identities=12% Similarity=0.186 Sum_probs=44.6
Q ss_pred CeEEEEc-CCHHHHH-HH----HHHHhCC-CcE-----E----EEEcCCCCCCCCCCccCCcHHHHHHHHCCCc-EEccC
Q psy5230 1 MKIIFAG-TSISAAA-IL----DTLYNSE-HNI-----V----LILTKPDLHSGRGMKLNFSPVKKYALKHSIK-IIQPI 63 (258)
Q Consensus 1 mrI~f~G-s~~fa~~-~L----~~L~~~~-~~i-----~----~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp-v~~~~ 63 (258)
|||+++| .+.++.. .+ .+|.+.+ .++ + +|+.. + +.-.+++|+++|++ ++.
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~-~----------~~~a~~~a~~~~~~~~~~-- 73 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR-S----------AEKVEALAKRFNIARWTT-- 73 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS-S----------SHHHHHHHHHTTCCCEES--
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC-C----------HHHHHHHHHHhCCCcccC--
Confidence 6899999 9998886 56 7776653 221 1 35442 2 12367899999996 432
Q ss_pred CCCCCcccccchHHHHHHHhcCCCcEEEEE
Q psy5230 64 SLKLNGKYHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
++-+.+.+-++|+++++
T Consensus 74 -------------~~~~ll~~~~iD~V~i~ 90 (383)
T 3oqb_A 74 -------------DLDAALADKNDTMFFDA 90 (383)
T ss_dssp -------------CHHHHHHCSSCCEEEEC
T ss_pred -------------CHHHHhcCCCCCEEEEC
Confidence 34456667788988877
No 122
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.18 E-value=4.4 Score=34.66 Aligned_cols=29 Identities=21% Similarity=0.218 Sum_probs=25.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC-CcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE-HNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~-~~i~~V 29 (258)
|||.|+|.+.+|......|.+.| +++.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~ 54 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAY 54 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEE
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEE
Confidence 68999999999999999999999 877533
No 123
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=80.01 E-value=1.8 Score=34.50 Aligned_cols=30 Identities=23% Similarity=0.236 Sum_probs=25.2
Q ss_pred Ce-EEEEc-CCHHHHHHHHHHH-hCCCcEEEEE
Q psy5230 1 MK-IIFAG-TSISAAAILDTLY-NSEHNIVLIL 30 (258)
Q Consensus 1 mr-I~f~G-s~~fa~~~L~~L~-~~~~~i~~Vv 30 (258)
|| |+++| +...|..+.+.|+ +.|++++++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~ 37 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYG 37 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEe
Confidence 56 89999 6789999999999 7899886654
No 124
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=79.92 E-value=4.9 Score=34.13 Aligned_cols=81 Identities=14% Similarity=0.154 Sum_probs=43.9
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCC--CCCc----
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISL--KLNG---- 69 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~--~~~~---- 69 (258)
|||+|+..+. .+....++|.+.||++. |+|..+. .......+.|++++..... ....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~-v~~~~~~-----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 74 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVR-WLGTADR-----------MEADLVPKHGIEIDFIRISGLRGKGIKAL 74 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEE-EEECTTS-----------THHHHGGGGTCEEEECCCCCCTTCCHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEE-EEecCCc-----------chhhhccccCCceEEecCCccCcCccHHH
Confidence 7999986542 22355677878889885 5554221 0123344568887543211 1000
Q ss_pred -----ccccchHHHHHHHhcCCCcEEEEE
Q psy5230 70 -----KYHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 70 -----~~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
........+...+++.+||++++.
T Consensus 75 ~~~~~~~~~~~~~l~~~l~~~~pDvv~~~ 103 (364)
T 1f0k_A 75 IAAPLRIFNAWRQARAIMKAYKPDVVLGM 103 (364)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 000011144567788899999875
No 125
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=79.92 E-value=5.2 Score=34.15 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=33.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS 56 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~g 56 (258)
|+|+|+|.+..|...+..|.+. +++.+.|+.+ .+....+++++.+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr-----------~~~~~~~l~~~~~ 181 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR-----------TKENAEKFADTVQ 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS-----------SHHHHHHHHHHSS
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC-----------CHHHHHHHHHHhh
Confidence 6899999999999999999876 6766666643 1123567777766
No 126
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=79.74 E-value=2.2 Score=38.97 Aligned_cols=30 Identities=10% Similarity=0.246 Sum_probs=26.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||+|+|.+.+|......|.++|++|. |+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~-v~d 31 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVA-VFN 31 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEE-EEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEE-EEe
Confidence 899999999999999999999999864 443
No 127
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=79.68 E-value=3.2 Score=37.97 Aligned_cols=75 Identities=11% Similarity=0.047 Sum_probs=46.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKL 81 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
|++++|.+..+..+.+.|.+.|.+++.+.|... .........+..+-...-.++.+.. ++.+.
T Consensus 334 rv~i~~~~~~~~~l~~~L~ElGmevv~~gt~~~---------~~~d~~~~~~~l~~~~~i~~d~d~~--------el~~~ 396 (483)
T 3pdi_A 334 RVLLYTGGVKSWSVVSALQDLGMKVVATGTKKS---------TEEDKARIRELMGDDVKMLDEGNAR--------VLLKT 396 (483)
T ss_dssp EEEEECSSSCHHHHHHHHHHHTCEEEEECBSSS---------CHHHHHHHHHHSCSSCCBCCSCSHH--------HHHHH
T ss_pred EEEEECCCchHHHHHHHHHHCCCEEEEEecCCC---------CHHHHHHHHHhcCCCCEEEeCCCHH--------HHHHH
Confidence 789999998888888888888999988777421 0111122222333211111111112 77788
Q ss_pred HhcCCCcEEEEE
Q psy5230 82 LNKIEFDIMIVM 93 (258)
Q Consensus 82 l~~~~~Dl~vv~ 93 (258)
+++.+||++|.-
T Consensus 397 i~~~~pDL~ig~ 408 (483)
T 3pdi_A 397 VDEYQADILIAG 408 (483)
T ss_dssp HHHTTCSEEECC
T ss_pred HHhcCCCEEEEC
Confidence 999999999854
No 128
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=79.66 E-value=5 Score=34.95 Aligned_cols=32 Identities=9% Similarity=0.222 Sum_probs=25.3
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+++|.+.++.. .+..|.+. ++++++|+..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~ 41 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR 41 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence 58999999999987 66667665 5788888864
No 129
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=79.65 E-value=2.7 Score=34.83 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=28.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
|||++.|++-.|..+.+.|++.|++|+++.-.+
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 689999998899999999999999998776543
No 130
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=79.62 E-value=7 Score=29.42 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=45.2
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE--ccCCCCCCccccc
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII--QPISLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~--~~~~~~~~~~~~~ 73 (258)
|||+|..++ .+|-.+|+.+....+++..-=|.|. ..| .. ......+.+.++||++- .+..+..
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~-~~g--~~-~~p~a~~~l~e~Gid~s~~~sr~l~~------ 74 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF-HVG--QS-PDTRSQKVCKSNGVDISKQRARQITK------ 74 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT-SCS--CS-CTHHHHHHHHHHSCCCCCCCCCCCCS------
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc-ccC--CC-CCHHHHHHHHHcCCChhcCeeccCCH------
Confidence 579999776 5788888888876555543333331 011 11 22335677788899873 3444432
Q ss_pred chHHHHHHHhcCCCcEEEEE
Q psy5230 74 IANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+.. ..+|++|++
T Consensus 75 ---~~~-----~~~DlIi~m 86 (146)
T 1p8a_A 75 ---ADF-----SKFDVIAAL 86 (146)
T ss_dssp ---HHH-----HSCSEEEES
T ss_pred ---hHh-----hcCCEEEEe
Confidence 221 268999987
No 131
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=79.58 E-value=2.5 Score=36.61 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=34.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||+|+|.+.+|......|.+.|++++ ++.+. +....+.+.+.|+.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~-~~~~~-----------~~~~~~~a~~~G~~~ 63 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVT-VGLRS-----------GSATVAKAEAHGLKV 63 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEE-EECCT-----------TCHHHHHHHHTTCEE
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEE-EEECC-----------hHHHHHHHHHCCCEE
Confidence 789999999999999999999998764 33221 112356778888854
No 132
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=79.39 E-value=4.6 Score=34.12 Aligned_cols=31 Identities=19% Similarity=0.395 Sum_probs=22.1
Q ss_pred CeEEEEcCC---------------------HHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGTS---------------------ISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~---------------------~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|||+|+... .+.....+.|.+.||++. |++.
T Consensus 4 mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~-v~~~ 55 (342)
T 2iuy_A 4 LKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVF-LLGA 55 (342)
T ss_dssp CEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEE-EESC
T ss_pred cEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEE-EEec
Confidence 899999876 144566778888889885 4553
No 133
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=79.29 E-value=3.4 Score=35.31 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=27.6
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|||+++|. +.++..-+..|.+.+.++++|+..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~ 36 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDP 36 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECS
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcC
Confidence 69999999 678988899998888899998864
No 134
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=79.27 E-value=4.9 Score=33.54 Aligned_cols=30 Identities=13% Similarity=0.319 Sum_probs=25.6
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|+++| |+..|..+.+.|++.|+++.++.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~ 35 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLF 35 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEE
Confidence 5799998 67899999999999999886553
No 135
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=78.94 E-value=7.7 Score=32.18 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=24.8
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~V 29 (258)
|+|+++| |+..|..+.+.|++.|+++.++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l 34 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLL 34 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEE
Confidence 5799998 5789999999999999888654
No 136
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=78.93 E-value=5.6 Score=33.73 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=26.3
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|+|++.| ++-.|..+.+.|++.|++|+++.-
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 6899998 677999999999999998876643
No 137
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=78.72 E-value=2.7 Score=34.85 Aligned_cols=29 Identities=24% Similarity=0.247 Sum_probs=26.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.+|......|.++|+++..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~ 29 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGW 29 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence 89999999999999999999999887544
No 138
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=78.59 E-value=2.3 Score=31.01 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=24.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
+|+++|.+.+|..+.+.|.+.|++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~ 35 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAV 35 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 5999999999999999999999887544
No 139
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=78.43 E-value=2.5 Score=33.45 Aligned_cols=29 Identities=24% Similarity=0.274 Sum_probs=25.9
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+++| ++.++..+...|.+.|+++..+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~ 30 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVG 30 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEE
Confidence 8999999 9999999999999998886543
No 140
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=78.13 E-value=11 Score=33.01 Aligned_cols=79 Identities=8% Similarity=-0.008 Sum_probs=45.1
Q ss_pred CeEEEEcCCHH-----HHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCC-C----CC--
Q psy5230 1 MKIIFAGTSIS-----AAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISL-K----LN-- 68 (258)
Q Consensus 1 mrI~f~Gs~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~-~----~~-- 68 (258)
|||+|+..+.. ..++.++|.++||++..+ |.+. ..+...+.|++++..+.. . ..
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~-~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 73 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYA-IPPV-------------FADKVAATGPRPVLYHSTLPGPDADPEA 73 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEE-ECGG-------------GHHHHHTTSCEEEECCCCSCCTTSCGGG
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCCCeEEEE-eCHH-------------HHHHHHhCCCEEEEcCCcCccccccccc
Confidence 59999876543 356778888889998644 4321 123445567777643221 0 00
Q ss_pred --cc-----------cccchHHHHHHHhcCCCcEEEEE
Q psy5230 69 --GK-----------YHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 69 --~~-----------~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
.. .......+.+.+++.+||++|+-
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d 111 (430)
T 2iyf_A 74 WGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHD 111 (430)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEC
Confidence 00 00111245566788899999874
No 141
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=77.83 E-value=11 Score=28.61 Aligned_cols=72 Identities=18% Similarity=0.186 Sum_probs=41.5
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE--EccCCCCCCccccc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI--IQPISLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv--~~~~~~~~~~~~~~ 73 (258)
+||+|..+.+ +|-.+|+.+...++++..-=|.| | .... ....+.+.++||++ +.+..+..
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~----g--~~~d-p~a~~vl~e~Gidis~h~ar~l~~------ 87 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTKP----A--QGLN-QLSVESIAEVGADMSQGIPKAIDP------ 87 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESSC----C--SSCC-HHHHHHHHHTTCCCTTCCCCBCCH------
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccCC----C--CCCC-HHHHHHHHHcCCCcCCCeeeECCH------
Confidence 4899998874 55556666654445554333443 1 1122 33567778899986 23333321
Q ss_pred chHHHHHHHhcCCCcEEEEE
Q psy5230 74 IANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+..+ .+|++|++
T Consensus 88 ---~~~~-----~~DlIitM 99 (148)
T 3rh0_A 88 ---ELLR-----TVDRVVIL 99 (148)
T ss_dssp ---HHHH-----HCSEEEEE
T ss_pred ---HHhc-----CCCEEEEe
Confidence 2222 48999998
No 142
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=77.67 E-value=5.5 Score=35.36 Aligned_cols=74 Identities=14% Similarity=0.179 Sum_probs=46.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC--cEEEEEcCCCCCCCCCCccCCcHHHHHHHHC------CCcEEccCCCCCCcccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLILTKPDLHSGRGMKLNFSPVKKYALKH------SIKIIQPISLKLNGKYH 72 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~--~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~------gIpv~~~~~~~~~~~~~ 72 (258)
|||+++|.+..|..+.+.|.+.+. ..+.|+.+. .....+++.+. ++..+..+ +.+..
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~-----------~~~~~~la~~l~~~~~~~~~~~~~D-~~d~~--- 66 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT-----------LSKCQEIAQSIKAKGYGEIDITTVD-ADSIE--- 66 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC-----------HHHHHHHHHHHHHTTCCCCEEEECC-TTCHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC-----------HHHHHHHHHHhhhhcCCceEEEEec-CCCHH---
Confidence 589999999999999999998873 344555431 12244455443 35544433 22221
Q ss_pred cchHHHHHHHhcCCCcEEEEE
Q psy5230 73 KIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 73 ~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
++.+.+++.++|++|.+
T Consensus 67 ----~l~~~l~~~~~DvVin~ 83 (405)
T 4ina_A 67 ----ELVALINEVKPQIVLNI 83 (405)
T ss_dssp ----HHHHHHHHHCCSEEEEC
T ss_pred ----HHHHHHHhhCCCEEEEC
Confidence 55566666678988866
No 143
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=77.52 E-value=4.1 Score=34.88 Aligned_cols=32 Identities=9% Similarity=0.138 Sum_probs=27.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|||+++|. +.++..-+..|.+.+.++++|+..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~ 36 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDI 36 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECS
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcC
Confidence 79999999 678988999998888899998864
No 144
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=77.44 E-value=4.9 Score=33.75 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=25.8
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|+++| |+..|..+.+.|++.|+++.++.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~ 35 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYA 35 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEE
Confidence 6899999 57899999999999999886554
No 145
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=77.38 E-value=4 Score=34.00 Aligned_cols=30 Identities=17% Similarity=0.170 Sum_probs=25.4
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|+++| |+..|..+.+.|++.|+++.++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 33 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGNPTYALV 33 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTCCEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCCCcEEEEE
Confidence 6899998 57899999999999999886554
No 146
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=77.20 E-value=1.6 Score=37.29 Aligned_cols=34 Identities=9% Similarity=0.324 Sum_probs=29.6
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC-CCcEEEEEcCCC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS-EHNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~-~~~i~~Vvt~pd 34 (258)
|||++.| ++.++..+++.+.+. +.++++++.+++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKG 57 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 5899999 999999999999876 589999998753
No 147
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=76.94 E-value=3.3 Score=34.90 Aligned_cols=30 Identities=13% Similarity=0.275 Sum_probs=25.4
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|++.| ++-.|..+.+.|++.|++|+++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEe
Confidence 6899997 56789999999999999887654
No 148
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=76.54 E-value=13 Score=32.41 Aligned_cols=47 Identities=11% Similarity=0.084 Sum_probs=30.7
Q ss_pred CeEEEEcCCHHH-----HHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSISA-----AAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
|||+|+..+..| +++.++|.++||+|..+ |.+. ..+...+.|++++.
T Consensus 13 ~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~-~~~~-------------~~~~~~~~g~~~~~ 64 (424)
T 2iya_A 13 RHISFFNIPGHGHVNPSLGIVQELVARGHRVSYA-ITDE-------------FAAQVKAAGATPVV 64 (424)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEE-ECGG-------------GHHHHHHHTCEEEE
T ss_pred ceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEE-eCHH-------------HHHHHHhCCCEEEe
Confidence 689999876433 56778888899998644 4321 12344556777654
No 149
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=76.32 E-value=5.1 Score=35.36 Aligned_cols=82 Identities=16% Similarity=0.124 Sum_probs=52.0
Q ss_pred eEEEEc-CCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCc-ccc--cchH
Q psy5230 2 KIIFAG-TSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNG-KYH--KIAN 76 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~-~~~--~~~~ 76 (258)
||+++| |++.|...|+-+.+. +++++++.+.. ...-+.+.|++++..++...+-.+.. +.. -...
T Consensus 5 ~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~----------n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~ 74 (376)
T 3a06_A 5 TLVILGATGSIGTQTLDVLKKVKGIRLIGISFHS----------NLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGS 74 (376)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESS----------CHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEEST
T ss_pred eEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccC----------CHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCH
Confidence 799999 699999999998876 47888887642 12347888999998876321111000 000 0000
Q ss_pred -HHHHHHhcCCCcEEEEE
Q psy5230 77 -ETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 77 -~~~~~l~~~~~Dl~vv~ 93 (258)
.+.+.+..-+.|+++.+
T Consensus 75 ~~l~el~~~~~~D~Vv~A 92 (376)
T 3a06_A 75 HSIEEMLEALKPDITMVA 92 (376)
T ss_dssp THHHHHHHHHCCSEEEEC
T ss_pred HHHHHHhcCCCCCEEEEE
Confidence 44555555678998877
No 150
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=76.23 E-value=6 Score=33.56 Aligned_cols=78 Identities=12% Similarity=0.203 Sum_probs=44.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCC--cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEH--NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~--~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|||++.|. +-.|..+.+.|++.|+ +++++-..+. ... ...+..+....++.+++.+ +.+.. .
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~--~~~-----~~~l~~~~~~~~~~~~~~D-l~d~~-------~ 89 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTY--SGN-----LNNVKSIQDHPNYYFVKGE-IQNGE-------L 89 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCT--TCC-----GGGGTTTTTCTTEEEEECC-TTCHH-------H
T ss_pred CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccc--ccc-----hhhhhhhccCCCeEEEEcC-CCCHH-------H
Confidence 68999986 6789999999999884 4443322211 110 0112222222356665543 43431 4
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.++..++|++|-.
T Consensus 90 ~~~~~~~~~~d~Vih~ 105 (346)
T 4egb_A 90 LEHVIKERDVQVIVNF 105 (346)
T ss_dssp HHHHHHHHTCCEEEEC
T ss_pred HHHHHhhcCCCEEEEC
Confidence 5556666679998866
No 151
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.06 E-value=3.5 Score=32.53 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=26.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||+++|. +..|..+.+.|+++|++++++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~ 31 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVV 31 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 99999986 6799999999999999887664
No 152
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=75.89 E-value=4.7 Score=37.30 Aligned_cols=76 Identities=16% Similarity=0.030 Sum_probs=49.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHC----CCcEEccCCCCCCcccccchHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH----SIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~----gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|++++|.+..+....+.|.+.|.+++.++|.... +.....+++...+. +..++.-.+ .. +
T Consensus 366 rvaI~gd~~~~~~la~fL~elGm~vv~v~~~~~~------~~~~~~~~~~l~~~~~~~~~~v~~~~D--~~--------~ 429 (523)
T 3u7q_B 366 RFALWGDPDFVMGLVKFLLELGCEPVHILCHNGN------KRWKKAVDAILAASPYGKNATVYIGKD--LW--------H 429 (523)
T ss_dssp EEEEECSHHHHHHHHHHHHHTTCEEEEEEETTCC------HHHHHHHHHHHHTSGGGTTCEEEESCC--HH--------H
T ss_pred EEEEECCchHHHHHHHHHHHcCCEEEEEEeCCCC------HHHHHHHHHHHhhccCCCCcEEEECCC--HH--------H
Confidence 7899998889999999999999999999985211 00112244444431 222322111 11 7
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.+++.+||++|.-
T Consensus 430 l~~~i~~~~pDLlig~ 445 (523)
T 3u7q_B 430 LRSLVFTDKPDFMIGN 445 (523)
T ss_dssp HHHHHHHTCCSEEEEC
T ss_pred HHHHHHhcCCCEEEEC
Confidence 7788899999999863
No 153
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=75.87 E-value=4.4 Score=35.27 Aligned_cols=46 Identities=13% Similarity=0.255 Sum_probs=34.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||+|+|.+.+|......|.+.|++|.+. .+ + ..-.+.|.+.|+.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~-dr-~-----------~~~~~~a~~~G~~~ 54 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGY-NR-S-----------RSGAKSAVDEGFDV 54 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEE-CS-C-----------HHHHHHHHHTTCCE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEE-eC-C-----------HHHHHHHHHcCCee
Confidence 68999999999999999999999887543 21 1 11245577888744
No 154
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=75.78 E-value=1.2 Score=40.10 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=29.4
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
||+++|.+..+..+.+++.+.|++++.|.+.++
T Consensus 4 ~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~ 36 (449)
T 2w70_A 4 KIVIANRGEIALRILRACKELGIKTVAVHSSAD 36 (449)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred eEEEeCCcHHHHHHHHHHHHcCCeEEEEecccc
Confidence 799999999999999999999999988877554
No 155
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=75.59 E-value=9.1 Score=29.35 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=41.8
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhC-C----CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCc
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNS-E----HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNG 69 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~-~----~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~ 69 (258)
|||+|..++ .+|-.+|+.+... | +++..-=|.|. ..| .. ......+.+.++||++ +.+..+..
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~-~~g--~~-~~p~a~~~l~e~Gid~s~~ar~l~~-- 78 (161)
T 2cwd_A 5 VRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAW-HVG--EP-MDPRARRVLEEEGAYFPHVARRLTR-- 78 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCT-TTT--CC-CCHHHHHHHHHHTCCCCCCCCBCCH--
T ss_pred CEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCC-ccC--CC-CCHHHHHHHHHcCcCccccccCCCH--
Confidence 589999887 4666777777652 3 23332222321 111 12 2233567778889987 33434432
Q ss_pred ccccchHHHHHHHhcCCCcEEEEE
Q psy5230 70 KYHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 70 ~~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+..+ .+|++|++
T Consensus 79 -------~~~~-----~~DlIi~M 90 (161)
T 2cwd_A 79 -------EDVL-----AYDHILVM 90 (161)
T ss_dssp -------HHHH-----HCSEEEES
T ss_pred -------hHhc-----cCCEEEEC
Confidence 2221 48999987
No 156
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=75.54 E-value=5.1 Score=36.33 Aligned_cols=32 Identities=9% Similarity=0.158 Sum_probs=26.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+++|.+.+|...++.+.+. +.++++|+..
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~ 56 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR 56 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC
Confidence 5999999999999999888664 5788888764
No 157
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=75.32 E-value=2.6 Score=34.82 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=27.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||++.|.+-.|..+.+.|+++|++|.++.-
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 36 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSR 36 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEES
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEc
Confidence 7999999988999999999999999877653
No 158
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=75.27 E-value=3.3 Score=34.32 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=25.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||+|+|.+.+|......|.+.|+++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~ 28 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIG 28 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEE
Confidence 8999999999999999999999887643
No 159
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=75.24 E-value=4 Score=37.76 Aligned_cols=70 Identities=13% Similarity=0.094 Sum_probs=49.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHC-CCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH-SIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~-gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
++|+++|.+.++..+.+.|.+.+++++.|=..|+ .+ +.+.+. |++++.-+.. ++ +.+
T Consensus 128 ~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~------------~~-~~~~~~~~~~~i~Gd~~-~~--------~~L 185 (565)
T 4gx0_A 128 GHILIFGIDPITRTLIRKLESRNHLFVVVTDNYD------------QA-LHLEEQEGFKVVYGSPT-DA--------HVL 185 (565)
T ss_dssp SCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHH------------HH-HHHHHSCSSEEEESCTT-CH--------HHH
T ss_pred CeEEEECCChHHHHHHHHHHHCCCCEEEEECCHH------------HH-HHHHHhcCCeEEEeCCC-CH--------HHH
Confidence 4699999999999999999998888765543221 23 334555 9998875443 33 666
Q ss_pred HHHhcCCCcEEEE
Q psy5230 80 KLLNKIEFDIMIV 92 (258)
Q Consensus 80 ~~l~~~~~Dl~vv 92 (258)
+...-.++|.+|+
T Consensus 186 ~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 186 AGLRVAAARSIIA 198 (565)
T ss_dssp HHTTGGGCSEEEE
T ss_pred HhcCcccCCEEEE
Confidence 6666667787765
No 160
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=75.01 E-value=8.7 Score=33.62 Aligned_cols=48 Identities=13% Similarity=0.210 Sum_probs=31.6
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
|||+|+..+. -..++.++|.++||++. |+|.++ ..++.++.|++++..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~-v~~~~~-------------~~~~v~~~g~~~~~l 53 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADAR-MCLPPD-------------YVERCAEVGVPMVPV 53 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEE-EEECGG-------------GHHHHHHTTCCEEEC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEE-EEeCHH-------------HHHHHHHcCCceeec
Confidence 8999874332 23455678888999985 455431 467778889988753
No 161
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=74.60 E-value=2.3 Score=37.07 Aligned_cols=32 Identities=13% Similarity=0.148 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHH-HHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAA-ILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~-~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+++|.+.++.. .+..|.+. +.++++|+..
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~ 39 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER 39 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence 48999999999986 67777665 5889898864
No 162
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=74.58 E-value=5.5 Score=29.61 Aligned_cols=70 Identities=14% Similarity=0.114 Sum_probs=38.3
Q ss_pred eEEEEcCCHH-----HHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE--EccCCCCCCcccccc
Q psy5230 2 KIIFAGTSIS-----AAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI--IQPISLKLNGKYHKI 74 (258)
Q Consensus 2 rI~f~Gs~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv--~~~~~~~~~~~~~~~ 74 (258)
||+|..+++. |-.+|+.+...++ .|.+---. |.. ......+.+.++||++ +.+..+...
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~---~v~SAGt~----g~~-~~~~a~~~l~e~Gid~s~~~sr~l~~~------ 71 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKI---AVTSCGLE----SSR-VHPTAIAMMEEVGIDISGQTSDPIENF------ 71 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTE---EEEEECCT----TSS-CCHHHHHHHHTTTCCCSSCCCCCGGGC------
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCE---EEEcccCC----CCC-CCHHHHHHHHHcCCCcccCccccCChH------
Confidence 8999998854 4445555543322 33332111 222 2234567888999987 333334321
Q ss_pred hHHHHHHHhcCCCcEEEEE
Q psy5230 75 ANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~ 93 (258)
+ -..+|++|++
T Consensus 72 --~------~~~~DlIi~m 82 (134)
T 2l17_A 72 --N------ADDYDVVISL 82 (134)
T ss_dssp --C------GGGCSEEEEC
T ss_pred --H------hccCCEEEEe
Confidence 1 1258999998
No 163
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.51 E-value=3.3 Score=34.01 Aligned_cols=28 Identities=18% Similarity=0.267 Sum_probs=25.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||.|+|.+.++......|.+.|+++..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~ 28 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVT 28 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEE
Confidence 8999999999999999999999987644
No 164
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=74.45 E-value=5.7 Score=34.80 Aligned_cols=33 Identities=9% Similarity=0.171 Sum_probs=28.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
+||+++|.+..+..+++++.+.|+++++| +.++
T Consensus 8 ~~ilI~g~g~~~~~~~~a~~~~G~~~v~v-~~~~ 40 (403)
T 4dim_A 8 KRLLILGAGRGQLGLYKAAKELGIHTIAG-TMPN 40 (403)
T ss_dssp CEEEEECCCGGGHHHHHHHHHHTCEEEEE-ECSS
T ss_pred CEEEEECCcHhHHHHHHHHHHCCCEEEEE-cCCC
Confidence 48999999999999999999999999877 4443
No 165
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=74.35 E-value=12 Score=34.14 Aligned_cols=75 Identities=15% Similarity=0.196 Sum_probs=43.7
Q ss_pred CeEEEEcCC-------HHHHHHHHH--HHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCccc
Q psy5230 1 MKIIFAGTS-------ISAAAILDT--LYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKY 71 (258)
Q Consensus 1 mrI~f~Gs~-------~fa~~~L~~--L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~ 71 (258)
|||+|+.++ .+....++. |.+.++++..+.+.++. ..++.......+ +++........
T Consensus 206 ~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~--- 272 (568)
T 2vsy_A 206 LRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDD---------GSTLRTRLAQAS-TLHDVTALGHL--- 272 (568)
T ss_dssp EEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCC---------SCHHHHHHHHTS-EEEECTTCCHH---
T ss_pred eEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCC---------ccHHHHHHHhcC-eEEECCCCCHH---
Confidence 799998654 234556677 44557888654443321 123344445555 54433222222
Q ss_pred ccchHHHHHHHhcCCCcEEEEE
Q psy5230 72 HKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 72 ~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
.+...+++.+||+++..
T Consensus 273 -----~l~~~i~~~~~Div~~~ 289 (568)
T 2vsy_A 273 -----ATAKHIRHHGIDLLFDL 289 (568)
T ss_dssp -----HHHHHHHHTTCSEEEEC
T ss_pred -----HHHHHHHhCCCCEEEEC
Confidence 77788999999999764
No 166
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=74.35 E-value=8.3 Score=32.44 Aligned_cols=30 Identities=10% Similarity=0.081 Sum_probs=25.3
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|++.|. +-.|..+.+.|++.|++++++.
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~ 34 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGAD 34 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEE
Confidence 68999986 6789999999999999887654
No 167
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=74.03 E-value=5.7 Score=32.19 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=27.4
Q ss_pred CeEEEEcCCHHHHHHHHHH--HhCCCcEEEEEcCCCCCCCC
Q psy5230 1 MKIIFAGTSISAAAILDTL--YNSEHNIVLILTKPDLHSGR 39 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L--~~~~~~i~~Vvt~pd~~~gr 39 (258)
+||+++|.+..|...++.+ ...++++++++...+...|+
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~ 126 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGT 126 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTC
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHh
Confidence 5899999999999988852 23468999999865444544
No 168
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=74.00 E-value=3.9 Score=32.78 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=25.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||+|+|.+.+|......|.+.|+++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~ 56 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVV 56 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEE
Confidence 7899999999999999999999988754
No 169
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=73.94 E-value=12 Score=31.72 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=25.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|+|++.|. +-.|..+.+.|++.|++|+++.-
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 68999987 56899999999999998876653
No 170
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=73.59 E-value=3.3 Score=35.56 Aligned_cols=69 Identities=19% Similarity=0.121 Sum_probs=44.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
++|+++|.+.++..+.+.|.+.|+ ++ ++.. |. .-+. +.+.|++++.-+.. ++ +.++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~-vid~-~~----------~~~~--~~~~~~~~i~gd~~-~~--------~~L~ 171 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FV-LAED-EN----------VRKK--VLRSGANFVHGDPT-RV--------SDLE 171 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EE-EESC-GG----------GHHH--HHHTTCEEEESCTT-SH--------HHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EE-EEeC-Ch----------hhhh--HHhCCcEEEEeCCC-CH--------HHHH
Confidence 379999999999999999998887 43 3332 11 1233 55688888765432 33 4554
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
...-.++|.++++
T Consensus 172 ~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 172 KANVRGARAVIVD 184 (336)
T ss_dssp HTCSTTEEEEEEC
T ss_pred hcChhhccEEEEc
Confidence 4434456666554
No 171
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=73.17 E-value=5 Score=33.89 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=27.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|||++.| ++-.|..+.+.|++.|++++++.-.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 7899999 5778999999999999998776543
No 172
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=73.02 E-value=3.8 Score=37.57 Aligned_cols=73 Identities=5% Similarity=0.024 Sum_probs=47.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCC--CcEEccCCCCCCcccccchHHHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHS--IKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~g--Ipv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|++++|.+..+....+.|.+.|.+++++.|.-. ......+.....+ ..++. ..+.. ++.
T Consensus 350 rv~i~g~~~~~~~la~~L~ElGm~vv~~gt~~~---------~~~d~~~l~~~~~~~~~i~~--~~d~~--------el~ 410 (492)
T 3u7q_A 350 RVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFA---------HNDDYDRTMKEMGDSTLLYD--DVTGY--------EFE 410 (492)
T ss_dssp EEEECBSSSHHHHTHHHHHTTTCEEEEEEESSC---------CHHHHHHHHTTSCTTCEEEE--SCBHH--------HHH
T ss_pred EEEEECCCchHHHHHHHHHHCCCEEEEEeCCCC---------CHHHHHHHHHhCCCCcEEEc--CCCHH--------HHH
Confidence 788999998888888889888999998877421 1112333322222 12222 11112 777
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+++.+||++|.-
T Consensus 411 ~~i~~~~pDL~ig~ 424 (492)
T 3u7q_A 411 EFVKRIKPDLIGSG 424 (492)
T ss_dssp HHHHHHCCSEEEEC
T ss_pred HHHHhcCCcEEEeC
Confidence 88899999999875
No 173
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=72.72 E-value=4.1 Score=34.11 Aligned_cols=29 Identities=28% Similarity=0.359 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.+|......|.++|+++..+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~ 32 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLI 32 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEE
Confidence 79999999999999999999999887543
No 174
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=72.53 E-value=10 Score=32.63 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=26.3
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 2 KIIFAG-TSISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
+|++.| ++-.|..+.+.|++.|++|+++.-.+
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 58 (375)
T 1t2a_A 26 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 58 (375)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCc
Confidence 799998 56789999999999999887765443
No 175
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=72.44 E-value=5.7 Score=32.83 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=29.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
|||+++|.+.+|..+.+.+.++++++++++.++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~ 36 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENT 36 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecC
Confidence 799999999999999999998866888888753
No 176
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=72.33 E-value=16 Score=34.49 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=46.5
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHH--HHCCCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYA--LKHSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A--~~~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|+|++.| ++-.|..+.+.|++.|++|+++.-.+... ...+..+. ...++.++.. ++.+.. .
T Consensus 12 ~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~--------~~~~~~l~~~~~~~v~~v~~-Dl~d~~-------~ 75 (699)
T 1z45_A 12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST--------YDSVARLEVLTKHHIPFYEV-DLCDRK-------G 75 (699)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--------THHHHHHHHHHTSCCCEEEC-CTTCHH-------H
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcch--------HHHHHHHhhccCCceEEEEc-CCCCHH-------H
Confidence 5799998 56789999999999999887654322110 11122222 1346666554 344431 4
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.++...+|++|-.
T Consensus 76 l~~~~~~~~~D~Vih~ 91 (699)
T 1z45_A 76 LEKVFKEYKIDSVIHF 91 (699)
T ss_dssp HHHHHHHSCCCEEEEC
T ss_pred HHHHHHhCCCCEEEEC
Confidence 4455555678988765
No 177
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=72.31 E-value=17 Score=30.41 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=34.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
|++++|++..|..+...|.+.| .-+.|+.+.. ....++| +.|+.+..
T Consensus 120 ~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~-----------~ka~~la-~~~~~~~~ 166 (269)
T 3phh_A 120 NALILGAGGSAKALACELKKQG-LQVSVLNRSS-----------RGLDFFQ-RLGCDCFM 166 (269)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSSC-----------TTHHHHH-HHTCEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH-----------HHHHHHH-HCCCeEec
Confidence 7999999999999999999999 4445665421 1256777 77766543
No 178
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=72.22 E-value=4.4 Score=33.91 Aligned_cols=27 Identities=22% Similarity=0.325 Sum_probs=25.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||.|+|.+.++......|.+.|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~ 28 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVT 28 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEE
Confidence 899999999999999999999998875
No 179
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=72.20 E-value=11 Score=31.10 Aligned_cols=72 Identities=11% Similarity=0.146 Sum_probs=44.1
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
|+|+++|. +..|..+.+.|++.| +++.++.-.|++. ....+ ...|+.+++. ++.+.. .+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~----------~~~~l-~~~~~~~~~~-D~~d~~-------~l 66 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK----------AAKEL-RLQGAEVVQG-DQDDQV-------IM 66 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH----------HHHHH-HHTTCEEEEC-CTTCHH-------HH
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH----------HHHHH-HHCCCEEEEe-cCCCHH-------HH
Confidence 47999986 679999999999988 8887664333210 11222 2457777654 344431 33
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.++ .+|.+|.+
T Consensus 67 ~~~~~--~~d~vi~~ 79 (299)
T 2wm3_A 67 ELALN--GAYATFIV 79 (299)
T ss_dssp HHHHT--TCSEEEEC
T ss_pred HHHHh--cCCEEEEe
Confidence 34444 47887765
No 180
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=71.67 E-value=3.7 Score=35.14 Aligned_cols=31 Identities=23% Similarity=0.424 Sum_probs=25.5
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhC-CCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNS-EHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~-~~~i~~Vvt 31 (258)
|||++.|. +-.|..+.+.|++. +++++++.-
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 89999984 67899999999997 688876643
No 181
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=71.59 E-value=4.8 Score=32.94 Aligned_cols=28 Identities=25% Similarity=0.405 Sum_probs=25.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||.|+|.+.++......|.++|+++..
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~ 47 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTI 47 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 7999999999999999999999998753
No 182
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=71.58 E-value=4.8 Score=34.35 Aligned_cols=71 Identities=10% Similarity=0.136 Sum_probs=45.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC-----CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE-----HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKI 74 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~-----~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~ 74 (258)
|||++.| |+-.|..+.+.|+++| ++|+++.-.++... ....++.++.. ++.+..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------------~~~~~~~~~~~-Dl~d~~----- 61 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------------HEDNPINYVQC-DISDPD----- 61 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------------CCSSCCEEEEC-CTTSHH-----
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------------cccCceEEEEe-ecCCHH-----
Confidence 7899998 5678999999999988 88876654432211 01235666543 344431
Q ss_pred hHHHHHHHhcCC-CcEEEEE
Q psy5230 75 ANETHKLLNKIE-FDIMIVM 93 (258)
Q Consensus 75 ~~~~~~~l~~~~-~Dl~vv~ 93 (258)
.+.+.++... +|.+|-.
T Consensus 62 --~~~~~~~~~~~~d~vih~ 79 (364)
T 2v6g_A 62 --DSQAKLSPLTDVTHVFYV 79 (364)
T ss_dssp --HHHHHHTTCTTCCEEEEC
T ss_pred --HHHHHHhcCCCCCEEEEC
Confidence 4445666555 8988765
No 183
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=71.42 E-value=9 Score=33.03 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=26.0
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|+|+++| |+..|..+.+.|++.|++++++.-
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R 37 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVH 37 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC
Confidence 5799998 577999999999999999876653
No 184
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=71.35 E-value=4.5 Score=34.68 Aligned_cols=30 Identities=10% Similarity=0.276 Sum_probs=26.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||.|+|.+.+|......|.++|+++. ++.
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~-~~~ 44 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVI-LWA 44 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEE-EEe
Confidence 899999999999999999999998874 443
No 185
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=71.20 E-value=5.1 Score=36.70 Aligned_cols=28 Identities=7% Similarity=0.199 Sum_probs=25.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|+|.|+|.+.+|......|.+.|+++.+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v 32 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCA 32 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999999998753
No 186
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=70.93 E-value=34 Score=26.45 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=40.8
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhC-CCc-EEEEEcCC--CCCCCCCCccCCcHHHHHHHHCCCcEE--ccCCCCCCc
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNS-EHN-IVLILTKP--DLHSGRGMKLNFSPVKKYALKHSIKII--QPISLKLNG 69 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~-~~~-i~~Vvt~p--d~~~gr~~~~~~~~v~~~A~~~gIpv~--~~~~~~~~~ 69 (258)
|||+|..++ .+|-.+|+.+++. |.. -+.|-+-- .-+.| .. ......+.++++||++- .+..+..
T Consensus 19 ~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G--~~-~d~~a~~~l~~~Gid~s~h~ar~l~~-- 93 (173)
T 4etm_A 19 ISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIG--NP-PHEGTQEILRREGISFDGMLARQVSE-- 93 (173)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTT--CC-CCHHHHHHHHHTTCCCTTCCCCBCCH--
T ss_pred cEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCCCC--CC-CCHHHHHHHHHCCccccCCccccCCH--
Confidence 589999877 4666777777643 321 12222210 01112 11 12236778889999872 2333322
Q ss_pred ccccchHHHHHHHhcCCCcEEEEE
Q psy5230 70 KYHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 70 ~~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+..+ .+|++|++
T Consensus 94 -------~d~~-----~~DlIl~M 105 (173)
T 4etm_A 94 -------QDLD-----DFDYIIAM 105 (173)
T ss_dssp -------HHHH-----HCSEEEES
T ss_pred -------hhcC-----CCCEEEEe
Confidence 2222 37999998
No 187
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=70.88 E-value=7.3 Score=33.36 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=24.9
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|++.| ++-.|..+.+.|++.|++|+++.
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 32 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIK 32 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEE
Confidence 5788898 56789999999999998876654
No 188
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=70.85 E-value=3.8 Score=33.93 Aligned_cols=48 Identities=17% Similarity=0.228 Sum_probs=36.8
Q ss_pred EEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 3 IIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 3 I~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
++++||++-+....+.|.+...++.++||.. ....+.|.++|||++..
T Consensus 35 vIGLGtGST~~~~i~~L~~~~~~i~~~V~tS------------~~t~~~~~~~Gi~l~~l 82 (239)
T 3uw1_A 35 VIGVGTGSTANCFIDALAAVKDRYRGAVSSS------------VATTERLKSHGIRVFDL 82 (239)
T ss_dssp EEEECCSHHHHHHHHHHHTTGGGSCEEEESS------------HHHHHHHHHTTCCBCCG
T ss_pred EEEECccHHHHHHHHHHHhhhccceEEeCCc------------HHHHHHHHHcCCcEEec
Confidence 7899999999999999977544565566642 23578899999999754
No 189
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=70.48 E-value=4.8 Score=33.24 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=27.9
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC-CCcEEEEEcCC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS-EHNIVLILTKP 33 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~-~~~i~~Vvt~p 33 (258)
|||++.| |+..|..+++.|.+. ++++.++.-.+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNV 35 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSG
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCH
Confidence 8999999 578999999999987 89988776544
No 190
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=70.40 E-value=10 Score=32.06 Aligned_cols=31 Identities=19% Similarity=0.433 Sum_probs=26.3
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|+|++.|. +-.|..+.+.|++.|++|+++.-
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 78999986 67899999999999998877654
No 191
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=70.21 E-value=7.6 Score=35.35 Aligned_cols=30 Identities=7% Similarity=0.218 Sum_probs=26.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||.|+|.+.+|......|.+.|++|. |+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~-v~d 32 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVC-AFN 32 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEE-EEC
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEE-EEe
Confidence 799999999999999999999999864 443
No 192
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=69.98 E-value=3.2 Score=33.65 Aligned_cols=66 Identities=11% Similarity=0.013 Sum_probs=43.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
+||+++|.+..|...++.+... ++++++++-..+...|+ . -.|+|++..+ ++.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~--~-----------i~gv~V~~~~-------------dl~ 134 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGR--P-----------VRGGVIEHVD-------------LLP 134 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTC--E-----------ETTEEEEEGG-------------GHH
T ss_pred CEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhh--h-----------hcCCeeecHH-------------hHH
Confidence 4899999999999888753222 67899999753333332 1 2367776432 444
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+++ ++|.++.+
T Consensus 135 ell~~-~ID~ViIA 147 (211)
T 2dt5_A 135 QRVPG-RIEIALLT 147 (211)
T ss_dssp HHSTT-TCCEEEEC
T ss_pred HHHHc-CCCEEEEe
Confidence 66677 88887665
No 193
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=69.80 E-value=5.2 Score=33.97 Aligned_cols=28 Identities=21% Similarity=0.348 Sum_probs=25.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||.|+|.+.+|...-..|.+.|+++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~ 49 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTV 49 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEE
Confidence 7999999999999999999999987643
No 194
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=69.79 E-value=4.1 Score=34.61 Aligned_cols=29 Identities=14% Similarity=0.232 Sum_probs=25.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.+|......|.++|+++..+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~ 29 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIW 29 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEE
Confidence 89999999999999999999988877543
No 195
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=69.59 E-value=5.8 Score=31.60 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=25.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.++......|.+.|+++..+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~ 48 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYY 48 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 79999999999999999999999887543
No 196
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=69.42 E-value=17 Score=27.64 Aligned_cols=75 Identities=23% Similarity=0.150 Sum_probs=41.8
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhC-C----CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE--ccCCCCCC
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNS-E----HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII--QPISLKLN 68 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~-~----~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~--~~~~~~~~ 68 (258)
+||+|..++ .+|-.+|+.+... | +++..-=|.+. ..| .. ......+.+.++||++- .+..+..
T Consensus 2 ~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~-~~g--~~-~~~~a~~~l~~~Gid~s~~~ar~l~~- 76 (156)
T 2gi4_A 2 KKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE-HDG--EG-MHYGTKNKLAQLNIEHKNFTSKKLTQ- 76 (156)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS-STT--CC-CCHHHHHHHHHTSCSCCCCCCCBCCH-
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc-ccC--CC-CCHHHHHHHHHcCCCccCCccccCCH-
Confidence 389999887 4666777777643 2 33332222221 112 11 22345678889999873 2333321
Q ss_pred cccccchHHHHHHHhcCCCcEEEEE
Q psy5230 69 GKYHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+. + ..+|++|++
T Consensus 77 --------~d---~--~~~DlIi~M 88 (156)
T 2gi4_A 77 --------KL---C--DESDFLITM 88 (156)
T ss_dssp --------HH---H--TTCSEEECC
T ss_pred --------HH---h--ccCCEEEEE
Confidence 21 1 368999987
No 197
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=69.28 E-value=4.6 Score=33.72 Aligned_cols=27 Identities=15% Similarity=0.239 Sum_probs=25.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|.+.+|......|.+.|+++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~ 27 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLI 27 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEE
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEE
Confidence 899999999999999999999998864
No 198
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=69.26 E-value=7.6 Score=32.74 Aligned_cols=31 Identities=10% Similarity=0.235 Sum_probs=26.1
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhC-CCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNS-EHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~-~~~i~~Vvt 31 (258)
|||++.|. +-.|..+.+.|++. |++|+++.-
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 89999986 56899999999998 788876654
No 199
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=69.25 E-value=15 Score=27.07 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=39.6
Q ss_pred eEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE--ccCCCCCCcccccc
Q psy5230 2 KIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII--QPISLKLNGKYHKI 74 (258)
Q Consensus 2 rI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~--~~~~~~~~~~~~~~ 74 (258)
||+|..+++ +|-.+|+.+...++++..-=|.|. . ......+.+.++||++- .+..+..
T Consensus 5 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~~-------~-~~p~a~~~l~~~Gid~s~~~ar~l~~------- 69 (131)
T 1jf8_A 5 TIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETH-------G-VNPKAIEAMKEVDIDISNHTSDLIDN------- 69 (131)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSCC-------C-CCHHHHHHHHHTTCCCTTCCCCBCCH-------
T ss_pred EEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCCC-------C-CCHHHHHHHHHcCCCcccCccccCCh-------
Confidence 699998874 555566666543344433333331 1 22336678889999872 3333432
Q ss_pred hHHHHHHHhcCCCcEEEEE
Q psy5230 75 ANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~ 93 (258)
+..+ .+|++|++
T Consensus 70 --~~~~-----~~D~Ii~m 81 (131)
T 1jf8_A 70 --DILK-----QSDLVVTL 81 (131)
T ss_dssp --HHHH-----HCSEEEEC
T ss_pred --HHhc-----cCCEEEEc
Confidence 2221 48999987
No 200
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=69.20 E-value=5.1 Score=36.25 Aligned_cols=30 Identities=13% Similarity=0.088 Sum_probs=27.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||+|+|.+.+|.++-..|.++|++++++-
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D 32 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCID 32 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEE
Confidence 799999999999999999999999887553
No 201
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=69.10 E-value=15 Score=31.05 Aligned_cols=77 Identities=13% Similarity=0.065 Sum_probs=40.7
Q ss_pred CeEEEEcCC--------HHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCC--cc
Q psy5230 1 MKIIFAGTS--------ISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLN--GK 70 (258)
Q Consensus 1 mrI~f~Gs~--------~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~--~~ 70 (258)
|||+|+... .......+.|.+.||++..+...++... + .|++++..+..... ..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-------~---------~~~~v~~~~~~~~~~~~~ 64 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC-------P---------KAFELIQVPVKSHTNHGR 64 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC-------C---------TTCEEEECCCCCSSHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC-------C---------CCcEEEEEccCcccchhh
Confidence 899998653 2345667788888999854443211100 0 26666543211100 00
Q ss_pred cccchHHHHHHHhcCCCcEEEEE
Q psy5230 71 YHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 71 ~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+......+...+++.+||++++.
T Consensus 65 ~~~~~~~l~~~i~~~~~Dvv~~~ 87 (374)
T 2iw1_A 65 NAEYYAWVQNHLKEHPADRVVGF 87 (374)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEES
T ss_pred HHHHHHHHHHHHhccCCCEEEEe
Confidence 00111144566788899999865
No 202
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=68.75 E-value=6.6 Score=35.87 Aligned_cols=34 Identities=15% Similarity=0.386 Sum_probs=29.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
|||++.| |+-.|..+++.|++.|++|+++.-.+.
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~ 182 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP 182 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 8999999 678999999999999999887765543
No 203
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=68.58 E-value=14 Score=30.61 Aligned_cols=29 Identities=14% Similarity=0.432 Sum_probs=25.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||++.|. +-.|..+.+.|++.|++++++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~ 30 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVL 30 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEE
Confidence 89999986 568999999999999988655
No 204
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=68.50 E-value=5.8 Score=33.48 Aligned_cols=28 Identities=4% Similarity=-0.064 Sum_probs=25.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||.|+|.+.++......|.+.|+++..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~ 35 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWG 35 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 7899999999999999999999987643
No 205
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=68.14 E-value=7.3 Score=35.38 Aligned_cols=29 Identities=7% Similarity=0.079 Sum_probs=25.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||+|+|.+.+|......|.++|+++ .|+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V-~v~ 34 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTV-AIY 34 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEE
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEE-EEE
Confidence 58999999999999999999999886 344
No 206
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=68.12 E-value=14 Score=28.20 Aligned_cols=78 Identities=18% Similarity=0.135 Sum_probs=42.0
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhC-CCc-E-EEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCccc
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNS-EHN-I-VLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNGKY 71 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~-~~~-i-~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~~ 71 (258)
|||+|..++ .+|-.+|+.+... |.. - +.|.+---.+...|.. ......+.+.++||++ +.+..+...
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~-~~p~a~~~l~~~Gid~s~~ar~l~~~--- 83 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGES-PDHRTVSICKQHGVKINHKGKQIKTK--- 83 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCC-CCHHHHHHHHHTTCCCCCCBCBCCGG---
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCC-CCHHHHHHHHHcCcCCCceEeECCHH---
Confidence 579999887 4666777777652 322 1 2333311011001112 2234567788899987 344444322
Q ss_pred ccchHHHHHHHhcCCCcEEEEE
Q psy5230 72 HKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 72 ~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+ + ..+|++|++
T Consensus 84 -----~----~--~~~DlIl~M 94 (161)
T 1d1q_A 84 -----H----F--DEYDYIIGM 94 (161)
T ss_dssp -----G----G--GTCSEEEES
T ss_pred -----H----H--hhCCEEEEe
Confidence 1 1 268999987
No 207
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=68.03 E-value=4.8 Score=36.09 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=26.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.+|.+....|.+.|++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~ 29 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGV 29 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 89999999999999999999999987554
No 208
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=68.00 E-value=12 Score=30.95 Aligned_cols=70 Identities=13% Similarity=0.059 Sum_probs=44.7
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|+|++.|. +-.|..+.+.|++. |++++++.-.+.+ ..+ ..++.++.. ++.+.. .
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~----------~~~-----~~~~~~~~~-D~~d~~-------~ 59 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN----------TDV-----VNSGPFEVV-NALDFN-------Q 59 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS----------CHH-----HHSSCEEEC-CTTCHH-------H
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc----------ccc-----cCCCceEEe-cCCCHH-------H
Confidence 68999987 56899999999998 7888766533211 111 125555544 343331 4
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.++...+|++|-.
T Consensus 60 ~~~~~~~~~~d~vih~ 75 (312)
T 2yy7_A 60 IEHLVEVHKITDIYLM 75 (312)
T ss_dssp HHHHHHHTTCCEEEEC
T ss_pred HHHHHhhcCCCEEEEC
Confidence 4556666689988765
No 209
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=67.92 E-value=15 Score=33.15 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=47.8
Q ss_pred EEEEcCCHHHHHH-----HHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHH
Q psy5230 3 IIFAGTSISAAAI-----LDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 3 I~f~Gs~~fa~~~-----L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|+|.|.+..|..+ ...|.+.|..++.|-+.+-++. -...++.++...|+|++......++. .++.+
T Consensus 103 IlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~a------a~eqL~~~~~~~gvpv~~~~~~~dp~---~i~~~ 173 (443)
T 3dm5_A 103 LLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG------AYHQLRQLLDRYHIEVFGNPQEKDAI---KLAKE 173 (443)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTH------HHHHHHHHHGGGTCEEECCTTCCCHH---HHHHH
T ss_pred EEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchh------HHHHHHHHHHhcCCcEEecCCCCCHH---HHHHH
Confidence 6677776554443 3445556777765554433221 11246788999999998754433321 12224
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
.++.++...+|++|+=
T Consensus 174 al~~a~~~~~DvVIID 189 (443)
T 3dm5_A 174 GVDYFKSKGVDIIIVD 189 (443)
T ss_dssp HHHHHHHTTCSEEEEE
T ss_pred HHHHHHhCCCCEEEEE
Confidence 4556666789998764
No 210
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=67.76 E-value=7.1 Score=32.56 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=25.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
+||+|+|.+..|..+...|.+.|++ +.|+.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~-V~v~~ 159 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAK-VFLWN 159 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCE-EEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHcCCE-EEEEE
Confidence 6899999999999999999998874 34443
No 211
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=67.65 E-value=3.4 Score=34.50 Aligned_cols=45 Identities=20% Similarity=0.239 Sum_probs=28.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSI 57 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gI 57 (258)
|||+|+|.+.+|....+.|.+. ++++.|+.+ .+....+++.+.|.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~-----------~~~~~~~~~~~~g~ 47 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSR-----------SIDRARNLAEVYGG 47 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECS-----------SHHHHHHHHHHTCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeC-----------CHHHHHHHHHHcCC
Confidence 6899999999999999988776 666445532 11235666667776
No 212
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=67.58 E-value=6 Score=33.02 Aligned_cols=27 Identities=19% Similarity=0.308 Sum_probs=24.9
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|. +.+|..+...|.+.|+++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~ 39 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA 39 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE
Confidence 69999999 9999999999999998775
No 213
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=67.45 E-value=5.5 Score=34.36 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=24.6
Q ss_pred CeEEEEcCCHH-----HHHHHHHHHhCCCcEEEEEcCC
Q psy5230 1 MKIIFAGTSIS-----AAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 1 mrI~f~Gs~~f-----a~~~L~~L~~~~~~i~~Vvt~p 33 (258)
|||+|+..+.. .+++-++|.++||+|. |+|.+
T Consensus 23 MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt-~~t~~ 59 (400)
T 4amg_A 23 MRALFITSPGLSHILPTVPLAQALRALGHEVR-YATGG 59 (400)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEE-EEECS
T ss_pred CeEEEECCCchhHHHHHHHHHHHHHHCCCEEE-EEeCc
Confidence 99999988754 3567788999999985 55644
No 214
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=67.37 E-value=10 Score=33.26 Aligned_cols=47 Identities=15% Similarity=0.176 Sum_probs=35.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
++|++.|.+.++..+.+.|.+.|.+|+ ++.++ +..+.+++.+.|...
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVv--v~D~~----------~~~l~~~a~~~ga~~ 220 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLV--VTDVN----------KAAVSAAVAEEGADA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE--EECSC----------HHHHHHHHHHHCCEE
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEE--EEcCC----------HHHHHHHHHHcCCEE
Confidence 479999999999999999999998875 44322 234677888766543
No 215
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=67.36 E-value=25 Score=30.14 Aligned_cols=49 Identities=10% Similarity=0.034 Sum_probs=37.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
|||+++|.+..|...++.|.+. +.++++|.... +.....++++.|++++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~-----------~~~~~~~~~~~g~~~~ 52 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK-----------PDFEAYRAKELGIPVY 52 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS-----------CSHHHHHHHHTTCCEE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC-----------HHHHHHHHHhcCcccc
Confidence 3899999999999999999876 36788877531 1235677888888765
No 216
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=67.08 E-value=18 Score=26.83 Aligned_cols=70 Identities=14% Similarity=0.063 Sum_probs=39.5
Q ss_pred eEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE--ccCCCCCCcccccc
Q psy5230 2 KIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII--QPISLKLNGKYHKI 74 (258)
Q Consensus 2 rI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~--~~~~~~~~~~~~~~ 74 (258)
||+|..+++ +|-.+|+.+...++++..-=|.|. . ......+.+.++||++- .+..+..
T Consensus 5 ~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~~-------~-~~p~a~~~l~~~Gid~s~~~sr~l~~------- 69 (139)
T 1jl3_A 5 IIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAH-------G-LNPNAVKAMKEVGIDISNQTSDIIDS------- 69 (139)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSCC-------C-CCHHHHHHHHHTTCCCTTCCCCBCCH-------
T ss_pred eEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCCC-------C-CCHHHHHHHHHcCCCcccCccCcCCH-------
Confidence 699998884 555566666443333333333331 1 12235678889999872 2333321
Q ss_pred hHHHHHHHhcCCCcEEEEE
Q psy5230 75 ANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~ 93 (258)
+. + ..+|++|++
T Consensus 70 --~~---~--~~~D~Ii~m 81 (139)
T 1jl3_A 70 --DI---L--NNADLVVTL 81 (139)
T ss_dssp --HH---H--TTCSEEEEC
T ss_pred --HH---h--hcCCEEEEe
Confidence 11 1 368999987
No 217
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=67.05 E-value=5.4 Score=34.06 Aligned_cols=27 Identities=22% Similarity=0.260 Sum_probs=25.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|.+.+|......|.+.|+++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~ 58 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQ 58 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEE
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEE
Confidence 799999999999999999999998864
No 218
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=66.95 E-value=7.1 Score=30.09 Aligned_cols=32 Identities=13% Similarity=0.222 Sum_probs=26.7
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|+|+++|. +..|..+.+.|++.|++++++.-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 68999986 679999999999999988766543
No 219
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=66.94 E-value=12 Score=29.81 Aligned_cols=30 Identities=7% Similarity=0.167 Sum_probs=25.0
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC--CCcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS--EHNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~--~~~i~~Vv 30 (258)
|+|++.| ++..|..+.+.|++. +++++++.
T Consensus 5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6789998 567899999999998 78887654
No 220
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=66.82 E-value=22 Score=30.39 Aligned_cols=29 Identities=24% Similarity=0.298 Sum_probs=24.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC--cEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~--~i~~V 29 (258)
|||+++|.+..+.++.-.|...++ +++.+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~ 38 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLI 38 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 689999999999999988888775 55444
No 221
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=66.53 E-value=8.1 Score=35.20 Aligned_cols=27 Identities=7% Similarity=0.090 Sum_probs=24.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|+|.|+|.+.+|......|.++|++|.
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G~~V~ 42 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRGYTVS 42 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTTCCEE
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCeEE
Confidence 689999999999999999999999874
No 222
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=66.25 E-value=32 Score=26.25 Aligned_cols=76 Identities=16% Similarity=0.169 Sum_probs=40.9
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHh-CCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE--ccCCCCCCcccc
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYN-SEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII--QPISLKLNGKYH 72 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~-~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~--~~~~~~~~~~~~ 72 (258)
|||+|..++ .+|-.+|+.+.+ .|..-+.|.+.--.+..-|.. ......+.+.++||++- .+..+...
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~~G~~-~~~~a~~~l~~~Gid~~~~~ar~l~~~---- 81 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEP-PHEGTQKILNKHNIPFDGMISELFEAT---- 81 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCSTTCC-CCHHHHHHHHHTTCCCTTCCCCBCCTT----
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcccCCC-CCHHHHHHHHHcCCCcCCCcceECChh----
Confidence 489999887 466667777664 232113344321111100111 22345677888999873 33334321
Q ss_pred cchHHHHHHHhcCCCcEEEEE
Q psy5230 73 KIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 73 ~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
. .+|++|++
T Consensus 82 -----------~-~~DlIi~M 90 (158)
T 3rof_A 82 -----------D-DFDYIVAM 90 (158)
T ss_dssp -----------C-CCSEEEES
T ss_pred -----------h-cCCEEEEc
Confidence 1 79999988
No 223
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=66.21 E-value=6.9 Score=33.60 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=23.0
Q ss_pred CeEEEEcCC---------HHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGTS---------ISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~---------~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|||+|+... .+.....+.|.+.||++..+...
T Consensus 21 MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 61 (406)
T 2gek_A 21 MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPA 61 (406)
T ss_dssp CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 899999853 24556778888889998655443
No 224
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=66.14 E-value=24 Score=26.56 Aligned_cols=72 Identities=14% Similarity=0.121 Sum_probs=40.2
Q ss_pred eEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE--EccCCCCCCcccccc
Q psy5230 2 KIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI--IQPISLKLNGKYHKI 74 (258)
Q Consensus 2 rI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv--~~~~~~~~~~~~~~~ 74 (258)
||+|..+++ +|-.+|+.+.. ++++..-=|.+ ..| .. ......+.+.++||++ +.+..+..
T Consensus 10 ~VLFVC~gN~cRSpmAEal~r~~~~-~~~v~SAGt~~--~~g--~~-~~p~a~~~l~e~Gid~~~~~ar~l~~------- 76 (150)
T 2wmy_A 10 SILVICTGNICRSPIGERLLRRLLP-SKKINSAGVGA--LVD--HT-ADESAIRVAEKNGLCLKGHRGTKFTS------- 76 (150)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHCT-TSEEEEEETTC--CTT--CC-CCHHHHHHHHHTTCCCTTCCCCBCCH-------
T ss_pred EEEEEcCCchHHHHHHHHHHHHhcC-CCEEEeccccC--CCC--CC-CCHHHHHHHHHcCCCccCCcccCCCH-------
Confidence 899998885 45555555543 35543333322 111 11 2234667888999987 23333321
Q ss_pred hHHHHHHHhcCCCcEEEEE
Q psy5230 75 ANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~ 93 (258)
+. + ..+|++|++
T Consensus 77 --~~---~--~~~DlIi~m 88 (150)
T 2wmy_A 77 --AL---A--RQYDLLLVM 88 (150)
T ss_dssp --HH---H--TTCSEEEES
T ss_pred --HH---h--ccCCEEEEc
Confidence 11 1 368999987
No 225
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=65.95 E-value=6 Score=33.04 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=24.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNI 26 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i 26 (258)
|||+|+|.+.+|......|.+.|+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V 31 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSL 31 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEE
Confidence 69999999999999999999988876
No 226
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=65.71 E-value=20 Score=29.99 Aligned_cols=31 Identities=10% Similarity=0.245 Sum_probs=25.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
+++++|++..|..+...|.+.|..-+.|+.+
T Consensus 122 ~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R 152 (272)
T 3pwz_A 122 RVLLLGAGGAVRGALLPFLQAGPSELVIANR 152 (272)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCCSEEEEECS
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEEeC
Confidence 6899999999999999999998755566653
No 227
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=65.37 E-value=6.2 Score=33.11 Aligned_cols=28 Identities=18% Similarity=0.227 Sum_probs=25.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||+|+|.+.++......|.+.|+++..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~ 31 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNV 31 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEE
Confidence 7999999999999999999999987643
No 228
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=65.25 E-value=4.8 Score=35.99 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=29.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
.||+++|....+..+.+++.+.|++++.|.+.++
T Consensus 2 k~ilI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~ 35 (451)
T 2vpq_A 2 KKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGD 35 (451)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred ceEEEeCCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 3799999999999999999999999988877554
No 229
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=65.17 E-value=5.6 Score=33.84 Aligned_cols=31 Identities=26% Similarity=0.203 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||.|+|.+.+|......|.+.|++-+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~d 55 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYD 55 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEc
Confidence 7999999999999999999999983334544
No 230
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=65.14 E-value=4.7 Score=33.61 Aligned_cols=27 Identities=26% Similarity=0.373 Sum_probs=24.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|.+.+|......|.+.|+++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~ 30 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLH 30 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEE
Confidence 799999999999999999999898874
No 231
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=64.86 E-value=8.4 Score=33.20 Aligned_cols=32 Identities=6% Similarity=0.163 Sum_probs=26.1
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 2 KIIFAGT-SISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
+|++.|. +-.|..+.+.|++.|++|+++.-.+
T Consensus 30 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 30 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred eEEEEcCCchHHHHHHHHHHHCCCEEEEEecCC
Confidence 7899986 6689999999999999887765443
No 232
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=64.80 E-value=17 Score=29.49 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=25.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC----CcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE----HNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~----~~i~~Vvt 31 (258)
|||.|+|.+.++......|.++| +++ .++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v-~~~~ 38 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENL-FYYG 38 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGE-EEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeE-EEEe
Confidence 79999999999999999999888 565 4444
No 233
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=64.57 E-value=13 Score=30.41 Aligned_cols=70 Identities=9% Similarity=0.218 Sum_probs=43.9
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|+|++.|. +..|..+.+.|++. |+++.++.-.+++ ...+ ...++.++.. ++.+.. .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~------------~~~l-~~~~~~~~~~-D~~d~~-------~ 59 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK------------ASTL-ADQGVEVRHG-DYNQPE-------S 59 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT------------THHH-HHTTCEEEEC-CTTCHH-------H
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH------------HhHH-hhcCCeEEEe-ccCCHH-------H
Confidence 78999985 67899999999998 8998776543211 1222 2356766554 344431 3
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.++ ++|.+|-.
T Consensus 60 l~~~~~--~~d~vi~~ 73 (287)
T 2jl1_A 60 LQKAFA--GVSKLLFI 73 (287)
T ss_dssp HHHHTT--TCSEEEEC
T ss_pred HHHHHh--cCCEEEEc
Confidence 334444 57887755
No 234
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=64.32 E-value=8.3 Score=34.31 Aligned_cols=31 Identities=10% Similarity=0.239 Sum_probs=27.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
+++++|.+.+|..+++.|.+.++++++++-.
T Consensus 54 ~v~IiGAG~~G~~l~~~l~~~g~~ivgfiDd 84 (409)
T 2py6_A 54 RLVILGTKGFGAHLMNVRHERPCEVIAAVDD 84 (409)
T ss_dssp EEEEECSSSTHHHHHSCSSSCSSEEEEEECT
T ss_pred eEEEEeCCHHHHHHHHHHHHCCCEEEEEEeC
Confidence 6899999999999999887778999999875
No 235
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=64.24 E-value=7.4 Score=32.97 Aligned_cols=28 Identities=7% Similarity=0.237 Sum_probs=25.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||.|+|.+.++......|.+.|+++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~ 37 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAI 37 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999999998753
No 236
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=64.20 E-value=7.2 Score=35.52 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=27.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||.++|.+.+|.+.-..|.+.|++++++=
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d 38 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLD 38 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEE
Confidence 899999999999999999999999886663
No 237
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=63.92 E-value=2.2 Score=35.15 Aligned_cols=29 Identities=10% Similarity=0.241 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||.|+|.+.+|...-..|.++||++.++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~ 35 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVL 35 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEEC
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEe
Confidence 89999999999999999999999887653
No 238
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=63.92 E-value=8.4 Score=30.73 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=26.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|+|++.|. +..|..+.+.|++.|++++++.-
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEEC
Confidence 78999996 67999999999999998876643
No 239
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=63.79 E-value=7.1 Score=32.61 Aligned_cols=27 Identities=19% Similarity=0.224 Sum_probs=24.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|.+.++......|.+.|+++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~ 31 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVY 31 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEE
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEE
Confidence 799999999999999999999888764
No 240
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=63.66 E-value=7.8 Score=34.84 Aligned_cols=72 Identities=10% Similarity=-0.008 Sum_probs=46.3
Q ss_pred eEEEEcCCHHHHHHHHHH-HhCCCcEEEEEcC-CCCCCCCCCccCCcHHHHHHHH--CCCcEEccCCCCCCcccccchHH
Q psy5230 2 KIIFAGTSISAAAILDTL-YNSEHNIVLILTK-PDLHSGRGMKLNFSPVKKYALK--HSIKIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L-~~~~~~i~~Vvt~-pd~~~gr~~~~~~~~v~~~A~~--~gIpv~~~~~~~~~~~~~~~~~~ 77 (258)
|++++|.+..+....+.| .+.|.+++.+.|. .++ ...++.... .+..+..- .+.. +
T Consensus 309 rv~i~g~~~~~~~l~~~L~~elG~~vv~~~~~~~~~----------~~~~~~l~~l~~~~~v~~~--~d~~--------e 368 (437)
T 3aek_A 309 SLFMFPDSQLEIPLARFLARECGMKTTEIATPFLHK----------AIMAPDLALLPSNTALTEG--QDLE--------A 368 (437)
T ss_dssp EEEECSSSSCHHHHHHHHHHTTCCEEEEEEESCCCH----------HHHHHHHTTSBTTCEEEEE--CCHH--------H
T ss_pred EEEEEcCchHHHHHHHHHHHHcCCEEEEEEecCCCH----------HHHHHHHHhcCCCCEEEeC--CCHH--------H
Confidence 789999999999999999 8889999999884 211 001111111 12233211 1111 6
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
..+++++.+||++|.-
T Consensus 369 ~~~~i~~~~pDliig~ 384 (437)
T 3aek_A 369 QLDRHEAINPDLTVCG 384 (437)
T ss_dssp HHHHHHHHCCSEEEEC
T ss_pred HHHHHhccCCCEEEeC
Confidence 6788999999999753
No 241
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=63.51 E-value=12 Score=34.47 Aligned_cols=73 Identities=10% Similarity=0.092 Sum_probs=49.0
Q ss_pred eEEEEcCCHHHHHHHHHH-HhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 2 KIIFAGTSISAAAILDTL-YNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L-~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
|++++|.+..+...-+.| .+.|.+++.+.|.. +.....+++...+.+-.+.-.++. . ++.+
T Consensus 282 rv~i~gd~~~~~~la~~L~~ElGm~vv~~gt~~--------~~~~~~~~~~~~~~~~~v~i~~D~--~--------el~~ 343 (525)
T 3aek_B 282 RVFIFGDGTHVIAAARIAAKEVGFEVVGMGCYN--------REMARPLRTAAAEYGLEALITDDY--L--------EVEK 343 (525)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCEEEEEEESC--------GGGHHHHHHHHHHTTCCCEECSCH--H--------HHHH
T ss_pred EEEEEcCchHHHHHHHHHHHHcCCeeEEEecCc--------hhHHHHHHHHHHhcCCcEEEeCCH--H--------HHHH
Confidence 788899889999888889 68899998777641 111223455555554333222211 1 7778
Q ss_pred HHhcCCCcEEEE
Q psy5230 81 LLNKIEFDIMIV 92 (258)
Q Consensus 81 ~l~~~~~Dl~vv 92 (258)
.+++.+||++|.
T Consensus 344 ~i~~~~pDL~ig 355 (525)
T 3aek_B 344 AIEAAAPELILG 355 (525)
T ss_dssp HHHHHCCSEEEE
T ss_pred HHhhcCCCEEEe
Confidence 888999999986
No 242
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=63.27 E-value=27 Score=30.34 Aligned_cols=36 Identities=11% Similarity=0.070 Sum_probs=29.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLH 36 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~ 36 (258)
++|+++|.+..+..+.+++.+.|++++.+-..|+.+
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p 48 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP 48 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh
Confidence 479999999999999999999999987765444443
No 243
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=63.22 E-value=17 Score=32.98 Aligned_cols=71 Identities=18% Similarity=0.321 Sum_probs=43.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
+||+++|.+..|..++..|.+. ++++ .|+.+. .+...+++.+.++.++..+ +.+.. ++.
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V-~v~~R~-----------~~ka~~la~~~~~~~~~~D-~~d~~-------~l~ 83 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINV-TVACRT-----------LANAQALAKPSGSKAISLD-VTDDS-------ALD 83 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEE-EEEESS-----------HHHHHHHHGGGTCEEEECC-TTCHH-------HHH
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeE-EEEECC-----------HHHHHHHHHhcCCcEEEEe-cCCHH-------HHH
Confidence 3799999999999999999987 5653 454431 1224555555566544322 22220 333
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.++ ++|++|.+
T Consensus 84 ~~l~--~~DvVIn~ 95 (467)
T 2axq_A 84 KVLA--DNDVVISL 95 (467)
T ss_dssp HHHH--TSSEEEEC
T ss_pred HHHc--CCCEEEEC
Confidence 4454 68988877
No 244
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=63.16 E-value=6.8 Score=34.40 Aligned_cols=78 Identities=17% Similarity=0.090 Sum_probs=51.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
||+++|.+..++++...|.+.|.++. |+...+....|.. ......+.+..+++|+.++.-..+. ++
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vt-vv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~----------~i-- 214 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPAS-IGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFE----------EM-- 214 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEE-EECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGG----------GC--
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEE-EEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEE----------Ec--
Confidence 68999999999999999999888875 6665444443311 0111235667788999997644432 11
Q ss_pred HHhcCCCcEEEEE
Q psy5230 81 LLNKIEFDIMIVM 93 (258)
Q Consensus 81 ~l~~~~~Dl~vv~ 93 (258)
-..+.+|++|++
T Consensus 215 -g~~~~~D~vv~a 226 (385)
T 3klj_A 215 -GDLIRSSCVITA 226 (385)
T ss_dssp -HHHHHHSEEEEC
T ss_pred -CeEEecCeEEEC
Confidence 122357988877
No 245
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=63.04 E-value=16 Score=30.40 Aligned_cols=66 Identities=15% Similarity=0.216 Sum_probs=41.9
Q ss_pred eEEEEc-CCHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHH
Q psy5230 2 KIIFAG-TSISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
||++.| ++-.|..+.+.|++. +++++++...++.. . ++.++.. ++.+.. .+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------~--------~~~~~~~-D~~d~~-------~~ 54 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------G--------GIKFITL-DVSNRD-------EI 54 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------T--------TCCEEEC-CTTCHH-------HH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------c--------CceEEEe-cCCCHH-------HH
Confidence 688898 567899999999998 68887664332210 0 4455443 343431 44
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
.+.++...+|++|-.
T Consensus 55 ~~~~~~~~~d~vih~ 69 (317)
T 3ajr_A 55 DRAVEKYSIDAIFHL 69 (317)
T ss_dssp HHHHHHTTCCEEEEC
T ss_pred HHHHhhcCCcEEEEC
Confidence 455665689988765
No 246
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=62.90 E-value=8.4 Score=33.69 Aligned_cols=27 Identities=26% Similarity=0.325 Sum_probs=25.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|.+.++......|.+.|+++.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~ 49 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECV 49 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEE
Confidence 799999999999999999999998774
No 247
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=62.89 E-value=44 Score=28.29 Aligned_cols=32 Identities=9% Similarity=0.209 Sum_probs=26.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHHh--CCCcEEEEEcC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYN--SEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~--~~~~i~~Vvt~ 32 (258)
|+|++.| ++-.|..+.+.|++ .|++|+++.-.
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECC
Confidence 6889995 56789999999999 89998776543
No 248
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=62.61 E-value=8.6 Score=32.93 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+++|.+.+|......|.++|+++..+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~ 32 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVL 32 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEE
Confidence 79999999999999999999999887544
No 249
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=62.50 E-value=21 Score=32.92 Aligned_cols=31 Identities=3% Similarity=-0.088 Sum_probs=26.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|++++|.+..+....+.|.+.|.+++.+.|.
T Consensus 337 rv~i~~~~~~~~~l~~~l~ElGm~vv~~~t~ 367 (533)
T 1mio_A 337 TACLYVGGSRSHTYMNMLKSFGVDSLVAGFE 367 (533)
T ss_dssp EEEEEESSSHHHHHHHHHHHHTCEEEEEEES
T ss_pred EEEEECCchHHHHHHHHHHHCCCEEEEEEec
Confidence 7888888888888888888889999999874
No 250
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=62.33 E-value=8.3 Score=33.65 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.+|...-..|.++|+++..+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~ 58 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLW 58 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEE
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEE
Confidence 79999999999999999999999987543
No 251
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=62.30 E-value=28 Score=30.44 Aligned_cols=29 Identities=7% Similarity=0.346 Sum_probs=23.9
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC-CcEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE-HNIVLI 29 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~-~~i~~V 29 (258)
|+|++.| ++..|..+.+.|++.| ++++++
T Consensus 36 k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~ 66 (399)
T 3nzo_A 36 SRFLVLGGAGSIGQAVTKEIFKRNPQKLHVV 66 (399)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCCEEEEE
Confidence 6899998 6789999999999998 566544
No 252
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=62.14 E-value=10 Score=31.26 Aligned_cols=32 Identities=9% Similarity=0.189 Sum_probs=28.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+++| ++.++..+.+.+.+. ++++++++..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 8999999 699999999998876 7999988854
No 253
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=62.12 E-value=27 Score=29.59 Aligned_cols=83 Identities=16% Similarity=0.177 Sum_probs=44.2
Q ss_pred CeEEEE-cCC-HH--HHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCccc---
Q psy5230 1 MKIIFA-GTS-IS--AAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNGKY--- 71 (258)
Q Consensus 1 mrI~f~-Gs~-~f--a~~~L~~L~~~~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~~--- 71 (258)
|||+|+ |+. ++ ..+++++|.+++ +++..+++.... ....+.....|+++ +...-.......
T Consensus 1 mkIl~v~~~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 1vgv_A 1 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHR----------EMLDQVLKLFSIVPDYDLNIMQPGQGLTEI 70 (384)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHSTTCEEEEEECCSSG----------GGGHHHHHHHTCCCSEECCCCSTTSCHHHH
T ss_pred CeEEEEecccHHHHHHHHHHHHHHhCCCCceEEEEcCCCH----------HHHHHHHHHcCCCCCcceecCCCCccHHHH
Confidence 899998 443 23 457888898887 476555553211 11234444567654 221110000000
Q ss_pred -ccchHHHHHHHhcCCCcEEEEE
Q psy5230 72 -HKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 72 -~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
......+...+++.+||++++.
T Consensus 71 ~~~~~~~l~~~l~~~~pDvv~~~ 93 (384)
T 1vgv_A 71 TCRILEGLKPILAEFKPDVVLVH 93 (384)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEe
Confidence 0001255677888899999884
No 254
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=62.06 E-value=15 Score=31.35 Aligned_cols=83 Identities=12% Similarity=0.121 Sum_probs=44.0
Q ss_pred CeEEEEcCCH--H--HHHHHHHHHhC-CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCccc-c-
Q psy5230 1 MKIIFAGTSI--S--AAAILDTLYNS-EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNGKY-H- 72 (258)
Q Consensus 1 mrI~f~Gs~~--f--a~~~L~~L~~~-~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~~-~- 72 (258)
|||+++.... + ..+.+++|.+. +|++..++|.+. .....+.....|+++ +...-....... .
T Consensus 6 mkIl~v~~~~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (376)
T 1v4v_A 6 KRVVLAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQH----------REQLRQALSLFGIQEDRNLDVMQERQALPDL 75 (376)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSC----------HHHHHHHHHTTTCCCSEECCCCSSCCCHHHH
T ss_pred eEEEEEEeccHHHHHHHHHHHHHHhCCCCceEEEEcCCc----------HHHHHHHHHHcCCCcccccccCCCCccHHHH
Confidence 6999886442 2 44677888877 678766666321 012334445567654 221100000000 0
Q ss_pred --cchHHHHHHHhcCCCcEEEEE
Q psy5230 73 --KIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 73 --~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
.....+...+++.+||++++.
T Consensus 76 ~~~~~~~l~~~l~~~~pDvv~~~ 98 (376)
T 1v4v_A 76 AARILPQAARALKEMGADYVLVH 98 (376)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEe
Confidence 011145567888999999884
No 255
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=61.90 E-value=7.7 Score=33.10 Aligned_cols=27 Identities=26% Similarity=0.357 Sum_probs=24.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC----CcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE----HNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~----~~i~ 27 (258)
|||.|+|.+.+|......|.++| +++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~ 53 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIM 53 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEE
Confidence 79999999999999999999988 6663
No 256
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=61.46 E-value=22 Score=27.09 Aligned_cols=74 Identities=14% Similarity=0.105 Sum_probs=40.5
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhC-C----CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCc
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNS-E----HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNG 69 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~-~----~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~ 69 (258)
|||+|..++ .+|-.+|+.+++. | +++..-=|.+. ..| .. ......+.+.++||++ +.+..+..
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~-~~G--~~-~~p~a~~~l~~~Gid~s~~ar~l~~-- 78 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW-HVG--SC-ADERAAGVLRAHGYPTDHRAAQVGT-- 78 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT-TTT--CC-CCHHHHHHHHHTTCCCCCCCCBCCH--
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC-cCC--CC-CCHHHHHHHHHcCcCCCceeeECCh--
Confidence 589999887 4667777777542 2 22322222221 111 11 2233567888999987 33333321
Q ss_pred ccccchHHHHHHHhcCCCcEEEEE
Q psy5230 70 KYHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 70 ~~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+ .+ .. |++|++
T Consensus 79 -------~---~~--~~-DlIi~M 89 (163)
T 1u2p_A 79 -------E---HL--AA-DLLVAL 89 (163)
T ss_dssp -------H---HH--TS-SEEEES
T ss_pred -------h---hc--cC-CEEEEe
Confidence 1 12 25 999988
No 257
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=61.05 E-value=9.5 Score=32.61 Aligned_cols=28 Identities=11% Similarity=0.038 Sum_probs=24.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||+|+|.+.+|......|.+.|+++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~ 32 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLA 32 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 7999999999999999999998988643
No 258
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=60.82 E-value=6.5 Score=32.81 Aligned_cols=28 Identities=14% Similarity=0.260 Sum_probs=25.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
|||.|+|.+.++......|.+.||++..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~ 29 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTV 29 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEE
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEE
Confidence 6899999999999999999999998753
No 259
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=60.41 E-value=10 Score=32.21 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=25.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+++|.+.+|...-..|.++|+++..+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~ 31 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVV 31 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEE
Confidence 79999999999999999999988877543
No 260
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=60.31 E-value=9.8 Score=32.11 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=24.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|.+.+|......|.+.|+++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~ 57 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVT 57 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEE
Confidence 689999999999999999999898864
No 261
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=60.31 E-value=13 Score=32.12 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=28.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDL 35 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 35 (258)
||+++|.+..+....+++.+.|++++.+-..++.
T Consensus 3 ~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~~ 36 (380)
T 3ax6_A 3 KIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRS 36 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 7999999999999999999999988766554443
No 262
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=60.20 E-value=8.7 Score=29.88 Aligned_cols=30 Identities=17% Similarity=0.462 Sum_probs=24.5
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCC--cEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEH--NIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~--~i~~Vv 30 (258)
|+|+++| ++..|..+.+.|+++|+ +++++.
T Consensus 6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 5899998 67789999999999987 665443
No 263
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=60.13 E-value=10 Score=32.24 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=26.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.+|...-..|.++|+++..+
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 79999999999999999999999988665
No 264
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=60.10 E-value=36 Score=26.14 Aligned_cols=72 Identities=13% Similarity=0.147 Sum_probs=39.8
Q ss_pred eEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE--EccCCCCCCcccccc
Q psy5230 2 KIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI--IQPISLKLNGKYHKI 74 (258)
Q Consensus 2 rI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv--~~~~~~~~~~~~~~~ 74 (258)
||+|..+.+ +|-.+|+.+.. ++++..-=|.+ ..| .. ......+.++++||++ +.+..+..
T Consensus 24 ~VLFVCtgN~cRSpmAEal~r~~~~-~~~v~SAGt~~--~~g--~~-~~p~a~~vl~e~Gid~s~~~sr~l~~------- 90 (167)
T 2fek_A 24 NILVVCVGNICRSPTAERLLQRYHP-ELKVESAGLGA--LVG--KG-ADPTAISVAAEHQLSLEGHCARQISR------- 90 (167)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHCT-TCEEEEEETTC--CTT--CC-CCHHHHHHHHHTTCCCTTCCCCBCCH-------
T ss_pred eEEEEcCCcHHHHHHHHHHHHHhcC-CeEEEeeecCC--CCC--CC-CCHHHHHHHHHcCCCccCCcCccCCH-------
Confidence 899998885 45555555543 35443333322 111 11 2234567788999987 23333431
Q ss_pred hHHHHHHHhcCCCcEEEEE
Q psy5230 75 ANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~ 93 (258)
+..+ .+|++|++
T Consensus 91 --~~~~-----~~DlIitM 102 (167)
T 2fek_A 91 --RLCR-----NYDLILTM 102 (167)
T ss_dssp --HHHH-----HSSEEEES
T ss_pred --HHhc-----cCCEEEEc
Confidence 2221 48999987
No 265
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=59.87 E-value=8 Score=33.41 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=26.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-------CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-------EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-------~~~i~~Vvt~ 32 (258)
|||+++|.+..|...++.|.+. +.++++|+..
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 4899999999999999999873 3678888764
No 266
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=59.81 E-value=16 Score=30.75 Aligned_cols=32 Identities=13% Similarity=0.144 Sum_probs=26.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
+||++.|- +..+...++.|.+.++++++-|.+
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP 40 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTYGTKIVAGVTP 40 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred CEEEEECCCCCHHHHHHHHHHHcCCeEEEEECC
Confidence 58999996 788999999998888887666653
No 267
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=59.45 E-value=12 Score=31.07 Aligned_cols=31 Identities=19% Similarity=0.405 Sum_probs=26.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||++.|. +-.|..+.+.|+++|++++++.-
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeC
Confidence 89999987 56899999999999998876643
No 268
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=59.32 E-value=8 Score=34.27 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=25.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||+|+|.+.+|.+.-..|.+ |+++.++-
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEE
Confidence 899999999999999999988 88876653
No 269
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=59.20 E-value=6.7 Score=33.77 Aligned_cols=28 Identities=18% Similarity=0.340 Sum_probs=24.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCC-cEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEH-NIVL 28 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~-~i~~ 28 (258)
|||+++| |+-.|..+.+.|+++|+ +++.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~ 30 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFE 30 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence 9999999 67899999999999887 6543
No 270
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=59.09 E-value=7.4 Score=32.67 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=26.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||+|+|.+.+|......|.++|+++..+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~ 32 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIG 32 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 799999999999988888988888886554
No 271
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=59.05 E-value=11 Score=31.05 Aligned_cols=24 Identities=13% Similarity=0.295 Sum_probs=22.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH 24 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~ 24 (258)
|||+|+|.+.+|......|.+.|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~ 25 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF 25 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC
Confidence 599999999999999999999887
No 272
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=58.35 E-value=20 Score=31.48 Aligned_cols=47 Identities=9% Similarity=0.287 Sum_probs=32.1
Q ss_pred CeEEEEcCCHH-----HHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSIS-----AAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
|||+|++.+.. .+++.++|.++||+|..+ +.++ ..+...+.|++++.
T Consensus 21 mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~-~~~~-------------~~~~v~~~G~~~~~ 72 (441)
T 2yjn_A 21 MRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVV-ASPA-------------LTEDITAAGLTAVP 72 (441)
T ss_dssp CEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEE-ECGG-------------GHHHHHTTTCCEEE
T ss_pred cEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEE-eCch-------------hHHHHHhCCCceee
Confidence 89999977744 468889999999998544 4321 23445566776654
No 273
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=58.12 E-value=9.3 Score=29.96 Aligned_cols=30 Identities=23% Similarity=0.138 Sum_probs=24.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|++++|...|+..+++.+.++++++++.+-
T Consensus 5 ~~~I~Gagg~gk~v~~~~~~~~~~v~~f~D 34 (194)
T 3bfp_A 5 KIYIYGASGHGLVCEDVAKNMGYKECIFLD 34 (194)
T ss_dssp EEEEEC--CHHHHHHHHHHHHTCSEEEEEC
T ss_pred cEEEEeCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 699999999999999988776799888764
No 274
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=57.71 E-value=4.9 Score=33.12 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=25.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||++.| |+-.|..+.+.|+++|++|.++.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~ 36 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFD 36 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEec
Confidence 5899999 57899999999999998876653
No 275
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=57.64 E-value=13 Score=29.57 Aligned_cols=30 Identities=13% Similarity=0.319 Sum_probs=27.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|++++|...++..+++.|.+.++++++.+-
T Consensus 14 ~v~IiGAGg~g~~v~~~l~~~~~~~vgfiD 43 (220)
T 4ea9_A 14 GVVIIGGGGHAKVVIESLRACGETVAAIVD 43 (220)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCEEEEEEe
Confidence 689999999999999999988899999886
No 276
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=57.24 E-value=9.7 Score=32.24 Aligned_cols=29 Identities=14% Similarity=0.202 Sum_probs=24.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+++|.+.+|......|.++|+++..+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~ 31 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFL 31 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 79999999999999999999999887543
No 277
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=57.11 E-value=9.6 Score=32.55 Aligned_cols=29 Identities=28% Similarity=0.268 Sum_probs=25.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC--cEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~--~i~~V 29 (258)
|||+++|.+.++..+...|...|+ +++.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~ 31 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLI 31 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEE
Confidence 899999999999999999988887 66544
No 278
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=57.10 E-value=6.6 Score=32.95 Aligned_cols=28 Identities=14% Similarity=-0.022 Sum_probs=24.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-----C-CcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-----E-HNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-----~-~~i~~ 28 (258)
|||+|+|.+.+|......|.++ | +++..
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~ 42 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSW 42 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 7999999999999999999988 8 77653
No 279
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=57.05 E-value=29 Score=28.77 Aligned_cols=68 Identities=10% Similarity=0.214 Sum_probs=43.3
Q ss_pred CeEEEEcCC-HHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGTS-ISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~-~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
|+|++.|.. -.|..+.+.|++.|++|+++.-.++. . .+ ++.++.. ++.+.. .+.
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~---------~l-------~~~~~~~-Dl~d~~-------~~~ 67 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K---------LP-------NVEMISL-DIMDSQ-------RVK 67 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C---------CT-------TEEEEEC-CTTCHH-------HHH
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c---------cc-------eeeEEEC-CCCCHH-------HHH
Confidence 678888754 68999999999999998776543221 1 01 5555543 344431 444
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.++...+|++|-.
T Consensus 68 ~~~~~~~~d~vih~ 81 (321)
T 2pk3_A 68 KVISDIKPDYIFHL 81 (321)
T ss_dssp HHHHHHCCSEEEEC
T ss_pred HHHHhcCCCEEEEc
Confidence 55555578988766
No 280
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=56.91 E-value=39 Score=29.11 Aligned_cols=26 Identities=27% Similarity=0.359 Sum_probs=21.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+++|.+..|..+.+.|.+ .+++.
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~ 42 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVY 42 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEE
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeE
Confidence 899999999999999888865 46653
No 281
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=56.78 E-value=51 Score=23.60 Aligned_cols=31 Identities=10% Similarity=0.038 Sum_probs=22.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS--EHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~--~~~i~~Vvt 31 (258)
|||+++..+......|+.+++. +++++..++
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~ 38 (153)
T 3cz5_A 6 ARIMLVDDHPIVREGYRRLIERRPGYAVVAEAA 38 (153)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTSTTEEEEEEES
T ss_pred cEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeC
Confidence 5788999988888888888775 455544443
No 282
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=56.75 E-value=16 Score=32.98 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=24.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
++|+++|++..|..+.+.|.+.|+++ .|+.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V-~v~~ 33 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKV-TVAC 33 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEE-EEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEE-EEEE
Confidence 47999999999999999999988774 4443
No 283
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=56.52 E-value=10 Score=31.31 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=23.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|.+.+|......|.+ |+++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~ 27 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTL 27 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEE
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEE
Confidence 699999999999999999999 99863
No 284
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=56.48 E-value=24 Score=31.19 Aligned_cols=31 Identities=13% Similarity=0.263 Sum_probs=24.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
.+|+++|.+..|..+.+.|...|..-+.++.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~ 198 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVAN 198 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4799999999999999999988874334443
No 285
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=56.07 E-value=13 Score=31.49 Aligned_cols=28 Identities=18% Similarity=0.162 Sum_probs=24.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.+|......|. +|+++..+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~ 30 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVV 30 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEE
Confidence 89999999999998888888 88877544
No 286
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=55.92 E-value=27 Score=26.89 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=37.7
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE--EccCCCCCCccccc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI--IQPISLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv--~~~~~~~~~~~~~~ 73 (258)
+||+|..+++ +|-.+|+.+.. ++++..-=|.+ ..| .. ......+.+.++||++ +.+..+..
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~~-~~~v~SAGt~~--~~g--~~-~~p~a~~vl~e~Gid~s~~~sr~l~~------ 94 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLLP-SKKINSAGVGA--LVD--HA-ADESAIRVAEKNGLCLKGHRGTKFTS------ 94 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHST-TSEEEEEETTC--CTT--CC-CCHHHHHC---CCCCCTTCCCCBCCH------
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcC-CeEEEeeecCC--CCC--CC-CCHHHHHHHHHcCCCcccCccCCCCh------
Confidence 3899998885 55555565543 35543333322 111 11 2233567788999987 23333321
Q ss_pred chHHHHHHHhcCCCcEEEEE
Q psy5230 74 IANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+. + ..+|++|++
T Consensus 95 ---~~---~--~~~DlIitM 106 (168)
T 2wja_A 95 ---AL---A--RQYDLLLVM 106 (168)
T ss_dssp ---HH---H--TTCSEEEES
T ss_pred ---hH---h--ccCCEEEEc
Confidence 11 1 368999987
No 287
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=55.91 E-value=13 Score=31.65 Aligned_cols=27 Identities=15% Similarity=0.308 Sum_probs=24.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC--cEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH--NIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~--~i~ 27 (258)
|||+|+|.+.+|......|.+.|+ +|.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~ 62 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIY 62 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEE
Confidence 689999999999999999999998 553
No 288
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=55.74 E-value=15 Score=29.16 Aligned_cols=33 Identities=12% Similarity=0.281 Sum_probs=26.5
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCC--cEEEEEcCC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEH--NIVLILTKP 33 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~--~i~~Vvt~p 33 (258)
|+|++.| ++..|..+.+.|++.|+ +++++.-.+
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC
Confidence 5799998 67899999999999998 776654433
No 289
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=55.63 E-value=20 Score=30.62 Aligned_cols=29 Identities=14% Similarity=0.348 Sum_probs=24.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC-CC-cEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS-EH-NIVLI 29 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~-~~-~i~~V 29 (258)
|+|++.| |+.+|..+.+.|++. |+ +++++
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~ 53 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVY 53 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEE
Confidence 6899998 678999999999998 87 66544
No 290
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=55.54 E-value=22 Score=31.03 Aligned_cols=48 Identities=10% Similarity=0.048 Sum_probs=33.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+|+++|.+..+..+.+.+...|. .|+++...++ =.++|++.|..++.+
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-------------~~~~a~~lGa~~i~~ 236 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPE-------------RLKLLSDAGFETIDL 236 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHH-------------HHHHHHTTTCEEEET
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-------------HHHHHHHcCCcEEcC
Confidence 68899998888888877766676 6666554322 247788899865544
No 291
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=55.43 E-value=14 Score=31.20 Aligned_cols=29 Identities=17% Similarity=0.155 Sum_probs=25.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC--cEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~--~i~~V 29 (258)
|||+++|.+..+..+...|...|+ ++..+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~ 38 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 899999999999999999998887 66544
No 292
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=55.42 E-value=17 Score=31.35 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=27.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC---------CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS---------EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~---------~~~i~~Vvt~ 32 (258)
|||+++|.+..+...++.|.+. +.++++|+..
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 6999999999999999999875 4678888864
No 293
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=54.89 E-value=6.7 Score=33.99 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=24.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
||+|+|.+.+|......|.++|+++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~ 43 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCV 43 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 899999999999999999988887643
No 294
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=54.68 E-value=38 Score=26.77 Aligned_cols=73 Identities=18% Similarity=0.211 Sum_probs=43.6
Q ss_pred CeEEEEcCC-HHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHC-CCcEEccCCCCCCcccccchHHH
Q psy5230 1 MKIIFAGTS-ISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH-SIKIIQPISLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~-~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~-gIpv~~~~~~~~~~~~~~~~~~~ 78 (258)
++|++.|.. ..+..+.+.|.+.|++++.+.-.+ ....+.+.+. ++.++. -++.+.. ++
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~------------~~~~~~~~~~~~~~~~~-~D~~~~~-------~~ 67 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN------------SDLVSLAKECPGIEPVC-VDLGDWD-------AT 67 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------------HHHHHHHHHSTTCEEEE-CCTTCHH-------HH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH------------HHHHHHHHhccCCCcEE-ecCCCHH-------HH
Confidence 467888764 689999999999999876543211 1234444433 566653 3444441 34
Q ss_pred HHHHhcC-CCcEEEEE
Q psy5230 79 HKLLNKI-EFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~-~~Dl~vv~ 93 (258)
.+.++.+ .+|++|-.
T Consensus 68 ~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 68 EKALGGIGPVDLLVNN 83 (244)
T ss_dssp HHHHTTCCCCSEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 4444443 47988765
No 295
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=54.59 E-value=47 Score=25.15 Aligned_cols=58 Identities=12% Similarity=0.045 Sum_probs=31.0
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhC-CCc-EEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNS-EHN-IVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~-~~~-i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||+|..++ .+|-.+|+.+... |.. -+.|.+.--.+..-|.. ......+.+.++||++
T Consensus 6 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~-~~~~a~~~l~~~Gid~ 70 (157)
T 3n8i_A 6 KSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNP-PDYRGQSCMKRHGIPM 70 (157)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCC-CCHHHHHHHHHTTCCC
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCC-CCHHHHHHHHHcCcCC
Confidence 589999876 4666677776643 322 12333311111101111 1233567788999997
No 296
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=54.37 E-value=9.5 Score=32.04 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=29.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC-CCcEEEEEcCC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS-EHNIVLILTKP 33 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~-~~~i~~Vvt~p 33 (258)
|||+++| ++.++..+++.+.+. ++++++++.++
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~ 42 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRT 42 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCT
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEec
Confidence 6899999 999999999999876 58999998864
No 297
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=54.18 E-value=27 Score=29.30 Aligned_cols=31 Identities=16% Similarity=0.367 Sum_probs=25.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
+++++|.+..|..+...|.+.|..-+.|+.+
T Consensus 128 ~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R 158 (281)
T 3o8q_A 128 TILLIGAGGAARGVLKPLLDQQPASITVTNR 158 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCCSEEEEEES
T ss_pred EEEEECchHHHHHHHHHHHhcCCCeEEEEEC
Confidence 7899999999999999999998755556653
No 298
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=54.06 E-value=65 Score=27.40 Aligned_cols=87 Identities=9% Similarity=0.071 Sum_probs=50.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCC-CCCcccccchHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISL-KLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~-~~~~~~~~~~~~~~ 79 (258)
|+|+|+|.+.+|..+-+.|...|+++++.=..+....+-........+.+++.+..+=++..+.- ... +.+. .
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~---~li~---~ 213 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTV---GIIN---S 213 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGT---TCBS---H
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhh---hhcc---H
Confidence 68999999999999999999889988665333322111000011246788888877765543211 111 0011 1
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+.+...+++.+++-
T Consensus 214 ~~l~~mk~gailIN 227 (315)
T 3pp8_A 214 ELLDQLPDGAYVLN 227 (315)
T ss_dssp HHHTTSCTTEEEEE
T ss_pred HHHhhCCCCCEEEE
Confidence 45566677766654
No 299
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=54.02 E-value=35 Score=29.03 Aligned_cols=32 Identities=19% Similarity=0.080 Sum_probs=26.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~ 32 (258)
.+|+++|++..|...+++|.+. +.+.+.|+.+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r 158 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV 158 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC
Confidence 4799999999999999999873 5677777653
No 300
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=53.98 E-value=27 Score=28.53 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=23.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
||+++|.+..|..+...|.+.|+++ .|+
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v-~v~ 145 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEV-WVW 145 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCE-EEE
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEE-EEE
Confidence 6899999999999999999988754 444
No 301
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=53.98 E-value=12 Score=34.17 Aligned_cols=34 Identities=9% Similarity=0.011 Sum_probs=29.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CC-cEEEEEcCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EH-NIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~-~i~~Vvt~pd 34 (258)
|||+|+|.+.+|.+.-..|.++ || +++++=..++
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 8999999999999999999999 99 8876644444
No 302
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=53.89 E-value=13 Score=33.38 Aligned_cols=29 Identities=24% Similarity=0.266 Sum_probs=25.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||+|+|.+.+|.+.-..|.+ |++++++=
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D 65 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALD 65 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEe
Confidence 899999999999998888877 88886653
No 303
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=53.76 E-value=12 Score=31.75 Aligned_cols=29 Identities=28% Similarity=0.269 Sum_probs=24.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC--CcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE--HNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~--~~i~~V 29 (258)
|||+|+|.+.++..+...|.++| ++++.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~ 32 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFI 32 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 79999999999999999999887 555433
No 304
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=53.47 E-value=42 Score=27.42 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=26.5
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 12 AAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 12 a~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
|...+..+.++|-.|+.|-|.+ . ....|+++|+..|.+++
T Consensus 53 A~~~i~~~~~~~~~iLfVgTk~---~------~~~~V~~~A~~~g~~yv 92 (231)
T 3bbn_B 53 ACDLVFDASSRGKQFLIVGTKN---K------AADSVARAAIRARCHYV 92 (231)
T ss_dssp HHHHSHHHHTTTCCEEEECCCT---T------THHHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHhCCCEEEEEeCcH---H------HHHHHHHHHHHhCCccc
Confidence 4445555666677887776643 2 22468999999998775
No 305
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=53.38 E-value=10 Score=32.43 Aligned_cols=32 Identities=9% Similarity=0.278 Sum_probs=27.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+++|.+.+|...++.|.+. +.++++|+..
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~ 36 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSR 36 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEES
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 6999999999999999999876 4788888874
No 306
>2g6t_A Uncharacterized protein, homolog HI1244 from haemophilus influenzae; hypothetical protein, structural genomics, PSI; 3.00A {Clostridium acetobutylicum} SCOP: c.147.1.1
Probab=53.22 E-value=38 Score=28.69 Aligned_cols=50 Identities=14% Similarity=0.134 Sum_probs=36.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhC---C-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNS---E-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLK 66 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~---~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~ 66 (258)
++++||+++++...|..|..+ | ..|+++.+ +|+.. .. =.|+||+.++.+.
T Consensus 3 ~~~I~g~~~~~~~a~n~~~~~~~~~~~~i~~~~~-~dk~a---~~-----------idg~~v~s~~~i~ 56 (306)
T 2g6t_A 3 KCLIWGVNDEYTLAYDKLLFEISKGNLSIEALIS-KDKYA---KY-----------IDGKEVIDKTEIS 56 (306)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHTTSEEEEEEEC-SSCSC---SB-----------SSSCBEECGGGGG
T ss_pred eEEEEeccHHHHHHHHHHHHHhhcccceEEEEec-chhhh---hh-----------hCCeeccCHHHHh
Confidence 789999999999999998764 3 78999984 34332 11 2388998876543
No 307
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=53.20 E-value=86 Score=25.11 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=41.6
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE--ccCCCCCCccccc
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII--QPISLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~--~~~~~~~~~~~~~ 73 (258)
+||+|..++ .+|-.+++.+...++++..--|.|.. . ......+.+.++||++- .+..+..
T Consensus 82 ~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt~~g~------~-~dp~a~~vl~e~Gidis~~~sr~l~~------ 148 (213)
T 3t38_A 82 PQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGSLPAS------E-IHPLVLEILSERGVNISDAFPKPLTD------ 148 (213)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEESSCCS------S-CCHHHHHHHHHTTCCCTTCCCCBCCH------
T ss_pred CEEEEECCCchhHHHHHHHHHHHhccCceEEEecccCCCC------C-CCHHHHHHHHHcCCCcccCcCCcCCH------
Confidence 589999876 45666677776544554333333321 1 12335677888999862 2333321
Q ss_pred chHHHHHHHhcCCCcEEEEE
Q psy5230 74 IANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+..+ .+|++|++
T Consensus 149 ---~~~~-----~~DlIitM 160 (213)
T 3t38_A 149 ---DVIR-----ASDYVITM 160 (213)
T ss_dssp ---HHHH-----HCSEEEES
T ss_pred ---HHhc-----cCCEEEEe
Confidence 2222 48999998
No 308
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=53.05 E-value=22 Score=32.75 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=29.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
++|+++|.+.+|..+.+.|.+.|++++.|=..|+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 5799999999999999999999999876655544
No 309
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=52.93 E-value=28 Score=28.31 Aligned_cols=48 Identities=10% Similarity=0.194 Sum_probs=36.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
.++++||++-.....+.|.+...++...||.. ....+.+.++|||++.
T Consensus 28 ~~IglgsGST~~~~i~~L~~~~~~itv~VtnS------------~~~a~~l~~~gi~l~~ 75 (224)
T 3kwm_A 28 ITLGVGTGSTVGFLIEELVNYRDKIKTVVSSS------------EDSTRKLKALGFDVVD 75 (224)
T ss_dssp EEEEECCSHHHHHHHHHGGGCTTTEEEEEESC------------HHHHHHHHHTTCCBCC
T ss_pred CEEEECCcHHHHHHHHHHHhhcCceEEEECCc------------HHHHHHHHHcCCeEEe
Confidence 37899999999999999977544665436642 2367889999999864
No 310
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=52.44 E-value=12 Score=31.55 Aligned_cols=26 Identities=27% Similarity=0.378 Sum_probs=24.4
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
||.|+|-+.++.+.-..|+++||++.
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~ 32 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELV 32 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEE
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEE
Confidence 89999999999999999999999874
No 311
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=52.42 E-value=16 Score=32.88 Aligned_cols=79 Identities=10% Similarity=0.133 Sum_probs=48.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcC-CCCCCCCCCccCCcHHHHHHHHCCC---cEEccCCCCCCcccccchHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTK-PDLHSGRGMKLNFSPVKKYALKHSI---KIIQPISLKLNGKYHKIANE 77 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~-pd~~~gr~~~~~~~~v~~~A~~~gI---pv~~~~~~~~~~~~~~~~~~ 77 (258)
|++++|.+..+....+.|.+.|.+++.+.|+ .++.. .+.....+++.+.+.+. .++.-.+ .. +
T Consensus 319 rv~i~g~~~~~~~la~~L~elGm~vv~~gt~~~~~~~---~~~~~~~l~~~~~~~~~~~~~v~~~~d--~~--------e 385 (460)
T 2xdq_A 319 SVFFMGDNLLEISLARFLIRCGMRVLEIGIPYMDKRY---QAAELALLSQTCAEMGHPLPTIVEKPD--NY--------N 385 (460)
T ss_dssp EEEECCCSSCHHHHHHHHHHTTCEEEEEEESCCCHHH---HHHHHHHHHHHHHHTTCCCCEEEESCC--HH--------H
T ss_pred EEEEECCchHHHHHHHHHHHCCCEEEEeCCCCCChhH---HHHHHHHHHHHHHhhCCCCcEEEECCC--HH--------H
Confidence 7889999999999999999999999988773 11100 00001123333444443 3332111 11 6
Q ss_pred HHHHHhcCCCcEEEEE
Q psy5230 78 THKLLNKIEFDIMIVM 93 (258)
Q Consensus 78 ~~~~l~~~~~Dl~vv~ 93 (258)
+.+.+++.+||++|.-
T Consensus 386 l~~~i~~~~pDL~ig~ 401 (460)
T 2xdq_A 386 QLQRIKALQPDLVITG 401 (460)
T ss_dssp HHHHHHHHCCSEEEEC
T ss_pred HHHHHhccCCCEEEeC
Confidence 7788888999999843
No 312
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=52.22 E-value=42 Score=29.69 Aligned_cols=74 Identities=11% Similarity=0.141 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHH-HHHHHHCCCcEEccCCCCC-CcccccchHHHHHHHhcCCC
Q psy5230 10 ISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPV-KKYALKHSIKIIQPISLKL-NGKYHKIANETHKLLNKIEF 87 (258)
Q Consensus 10 ~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v-~~~A~~~gIpv~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 87 (258)
.-++|+++.|+++|-.+ -+++|=.+|.|+..+..-.|+ ..+.+-.| ||.-.+..-. + +..+.++++++
T Consensus 36 ~aalpTI~~ll~~gakv-il~SHlGRPkg~~~~~SL~pva~~L~~lLg-~V~f~~d~~G~~--------~~~~~v~~l~~ 105 (390)
T 1v6s_A 36 LESLPTLRHLLAGGASL-VLLSHLGRPKGPDPKYSLAPVGEALRAHLP-EARFAPFPPGSE--------EARREAEALRP 105 (390)
T ss_dssp HHHHHHHHHHHHTTCEE-EEECCCSCCSSCCGGGCSHHHHHHHHHHCT-TEEECCSCTTSH--------HHHHHHHTCCT
T ss_pred HHHHHHHHHHHHCCCEE-EEECCCCCCCCCCCCcCHHHHHHHHHHHhC-CceeccccCCcH--------HHHHHHhcCCC
Confidence 35789999999998764 577776777663223333455 45677779 9855444434 4 66666777655
Q ss_pred cEEEEE
Q psy5230 88 DIMIVM 93 (258)
Q Consensus 88 Dl~vv~ 93 (258)
-=++..
T Consensus 106 G~VlLL 111 (390)
T 1v6s_A 106 GEVLLL 111 (390)
T ss_dssp TCEEEC
T ss_pred CeEEEE
Confidence 333343
No 313
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=51.99 E-value=17 Score=30.44 Aligned_cols=29 Identities=21% Similarity=0.375 Sum_probs=25.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
+||+|+|.+.++..+-..|.++|+++..+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~ 44 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLV 44 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 47999999999999999999999887533
No 314
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=51.90 E-value=39 Score=29.32 Aligned_cols=31 Identities=10% Similarity=0.184 Sum_probs=23.2
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||+|++.+. ..+++.++|.++||+|..+.+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~ 36 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP 36 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcC
Confidence 9999987764 345677888889999865544
No 315
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=51.71 E-value=59 Score=27.94 Aligned_cols=43 Identities=14% Similarity=0.094 Sum_probs=32.6
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|++.|. +..+..+.+.+...|.++++++ .+.+ .++|++.|..
T Consensus 167 ~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~-------------~~~~~~lGa~ 210 (371)
T 3gqv_A 167 YVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHN-------------FDLAKSRGAE 210 (371)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-------------HHHHHHTTCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH-------------HHHHHHcCCc
Confidence 5888888 6899988888888888887764 3321 5788999975
No 316
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=51.38 E-value=16 Score=30.93 Aligned_cols=82 Identities=11% Similarity=0.125 Sum_probs=43.0
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHh--CCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCccccc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYN--SEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHK 73 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~--~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~ 73 (258)
|||+|+...- =....+..|.+ +||++..+...... .....+....+++++........ ..+.
T Consensus 5 mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 73 (394)
T 3okp_A 5 RKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNA----------EEAHAYDKTLDYEVIRWPRSVML-PTPT 73 (394)
T ss_dssp CCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSH----------HHHHHHHTTCSSEEEEESSSSCC-SCHH
T ss_pred ceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCc----------cchhhhccccceEEEEccccccc-cchh
Confidence 8999997621 11123333333 37887544332210 11245566778888764432110 0001
Q ss_pred chHHHHHHHhcCCCcEEEEE
Q psy5230 74 IANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 74 ~~~~~~~~l~~~~~Dl~vv~ 93 (258)
....+...+++.+||++++.
T Consensus 74 ~~~~l~~~~~~~~~Dvv~~~ 93 (394)
T 3okp_A 74 TAHAMAEIIREREIDNVWFG 93 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEES
T ss_pred hHHHHHHHHHhcCCCEEEEC
Confidence 12256677888899999864
No 317
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=51.04 E-value=10 Score=30.27 Aligned_cols=33 Identities=15% Similarity=0.321 Sum_probs=26.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC-CcEEEEEcCC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE-HNIVLILTKP 33 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~-~~i~~Vvt~p 33 (258)
|+|++.| +...|..+.+.|++.| ++++++.-.+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 3688888 7789999999999998 7776665443
No 318
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=51.01 E-value=37 Score=27.43 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=24.7
Q ss_pred eEEEEcC-CHHHHHHHHHHHhC--CCcEEEEEc
Q psy5230 2 KIIFAGT-SISAAAILDTLYNS--EHNIVLILT 31 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~--~~~i~~Vvt 31 (258)
||++.|. +..|..+.+.|++. |++++++.-
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence 5788885 67899999999998 899877654
No 319
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=50.87 E-value=36 Score=29.38 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=38.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
|||++.|.+..|...++.|.+.. .++++|.... +......+.+.|++++..
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~-----------~~~~~~~a~~~g~~~~~~ 53 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTS-----------PNYEAFIAHRRGIRIYVP 53 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSS-----------CSHHHHHHHHTTCCEECC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCC-----------hHHHHHHHHhcCcceecC
Confidence 49999999999999999998763 6788876531 123456777788888743
No 320
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=50.86 E-value=21 Score=29.53 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=26.5
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|+|++.|. +-.|..+.+.|++.|++|+++.-.
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 58999987 568999999999999998766543
No 321
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=50.62 E-value=18 Score=30.41 Aligned_cols=29 Identities=21% Similarity=0.199 Sum_probs=25.3
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~V 29 (258)
+||+|+| .+.+|..+...|.+.|+++..+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~ 51 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISIL 51 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEE
Confidence 4899999 9999999999999999887543
No 322
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=50.43 E-value=88 Score=24.37 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=40.6
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHhC---CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE-ccCCCCCCccc
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYNS---EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII-QPISLKLNGKY 71 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~~---~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~-~~~~~~~~~~~ 71 (258)
|||+|..+. .+|-.+|+.+... ++++..-=|.+. + | .. ......+.+.++||++- .+..+..
T Consensus 35 ~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~-~-G--~~-~dp~a~~vl~e~Gidishrar~lt~---- 105 (184)
T 4etn_A 35 MDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFAS-P-N--GK-ATPHAVEALFEKHIALNHVSSPLTE---- 105 (184)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCC-T-T--CB-CCHHHHHHHHHTTCCCCCBCCBCCH----
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCc-C-C--CC-CCHHHHHHHHHcCCCchhccCcCCH----
Confidence 589999887 4666677777653 333322222221 1 2 11 22235677788999863 2222321
Q ss_pred ccchHHHHHHHhcCCCcEEEEE
Q psy5230 72 HKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 72 ~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
+..+ .+|++|++
T Consensus 106 -----~d~~-----~~DlIltM 117 (184)
T 4etn_A 106 -----ELME-----SADLVLAM 117 (184)
T ss_dssp -----HHHH-----HCSEEEES
T ss_pred -----HHcC-----CCCEEEEc
Confidence 2222 48999998
No 323
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=50.38 E-value=21 Score=30.73 Aligned_cols=80 Identities=11% Similarity=0.177 Sum_probs=43.8
Q ss_pred eEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC--CCCCCc--c--
Q psy5230 2 KIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI--SLKLNG--K-- 70 (258)
Q Consensus 2 rI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~--~~~~~~--~-- 70 (258)
||+|.|.+. -++.+.++|.++||+|..|-+ + ||.+ .++..+.|++++..+ .+.... +
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~-~-----~g~e------~~~v~~~g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGT-P-----RGIE------NDLVPKAGLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEC-S-----SSTH------HHHTGGGTCCEEECC-------------
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEEC-C-----chHh------hchhhhcCCcEEEEECCCcCCCCHHHHH
Confidence 799987653 256677899999999865543 2 1211 234456677765422 111000 0
Q ss_pred -cc-cch---HHHHHHHhcCCCcEEEEE
Q psy5230 71 -YH-KIA---NETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 71 -~~-~~~---~~~~~~l~~~~~Dl~vv~ 93 (258)
.+ ... ......+++.+||++|+.
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~~PDvVi~~ 99 (365)
T 3s2u_A 72 KAPLELLKSLFQALRVIRQLRPVCVLGL 99 (365)
T ss_dssp -CHHHHHHHHHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEc
Confidence 00 000 123456788999999876
No 324
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=50.30 E-value=25 Score=32.06 Aligned_cols=27 Identities=4% Similarity=0.113 Sum_probs=24.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
.+|.|+|.+.+|......|.++|++|.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~ 37 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVC 37 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEE
Confidence 479999999999999999999999874
No 325
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=49.95 E-value=75 Score=24.04 Aligned_cols=55 Identities=18% Similarity=0.182 Sum_probs=30.5
Q ss_pred CeEEEEcCC-----HHHHHHHHHHHh-CC----CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTS-----ISAAAILDTLYN-SE----HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~-----~fa~~~L~~L~~-~~----~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
|||+|..++ .+|-.+|+.+.+ .| +++..-=|.+- ..| .. ......+.+.++||++
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~-~~G--~~-~~~~a~~~l~~~Gid~ 69 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSY-HEG--QQ-ADSRMRKVGKSRGYQV 69 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCT-TTT--CB-CCHHHHHHHHHTTCCC
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCc-ccC--CC-CCHHHHHHHHHcCcCC
Confidence 589999886 466677777764 23 22322222221 111 11 1233567788899987
No 326
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=49.80 E-value=18 Score=31.13 Aligned_cols=78 Identities=15% Similarity=0.264 Sum_probs=39.7
Q ss_pred CeEEEEcCC--------HHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCc--HHHHHHHHCCCcEEccCCCCCCcc
Q psy5230 1 MKIIFAGTS--------ISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFS--PVKKYALKHSIKIIQPISLKLNGK 70 (258)
Q Consensus 1 mrI~f~Gs~--------~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~--~v~~~A~~~gIpv~~~~~~~~~~~ 70 (258)
|||+|+++. .+.....+.|.+. |++..+...+. |+....... +........ .+.+..+...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~---g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-- 71 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF---GRSVHANIEEFDAQTAEHVR---GLNEQGFYYS-- 71 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC---SCCSCSSSEEEEHHHHHHHT---TCCSTTCCHH--
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC---CcccccccccCCcccccccc---ccccccchHH--
Confidence 999999752 3455666777777 87754433322 332111111 222222111 1111112111
Q ss_pred cccchHHHHHHHhcCCCcEEEEE
Q psy5230 71 YHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 71 ~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
.+...++..+||++++.
T Consensus 72 ------~l~~~l~~~~~Div~~~ 88 (413)
T 3oy2_A 72 ------GLSEFIDVHKPDIVMIY 88 (413)
T ss_dssp ------HHHHHHHHHCCSEEEEE
T ss_pred ------HHHHHHHhcCCCEEEEc
Confidence 45677888899999876
No 327
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=49.74 E-value=47 Score=23.01 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=42.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-CCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccC-CCCCCcccccchHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLYN-SEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPI-SLKLNGKYHKIANET 78 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~-~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~-~~~~~~~~~~~~~~~ 78 (258)
|||+++..+......++.+++ .|++++..++... ...+...+....++-.+ .+.+. -..++
T Consensus 2 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~------------~a~~~~~~~~~dlii~d~~l~~~-----~g~~~ 64 (134)
T 3f6c_A 2 LNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGG------------SAVQRVETLKPDIVIIDVDIPGV-----NGIQV 64 (134)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTEEEEEEESSST------------THHHHHHHHCCSEEEEETTCSSS-----CHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHH------------HHHHHHHhcCCCEEEEecCCCCC-----ChHHH
Confidence 689999999888888877765 4566654444321 13334444443332211 11111 01277
Q ss_pred HHHHhcCCCcEEEEE
Q psy5230 79 HKLLNKIEFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~~~Dl~vv~ 93 (258)
+..+++..++.-|++
T Consensus 65 ~~~l~~~~~~~~ii~ 79 (134)
T 3f6c_A 65 LETLRKRQYSGIIII 79 (134)
T ss_dssp HHHHHHTTCCSEEEE
T ss_pred HHHHHhcCCCCeEEE
Confidence 888888777754443
No 328
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=49.73 E-value=55 Score=23.69 Aligned_cols=20 Identities=10% Similarity=0.373 Sum_probs=10.2
Q ss_pred CeEEEEcCCHHHHHHHHHHH
Q psy5230 1 MKIIFAGTSISAAAILDTLY 20 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~ 20 (258)
|||+++..+......|+.++
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L 56 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIF 56 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHH
Confidence 35555555555555554443
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=49.64 E-value=41 Score=28.92 Aligned_cols=44 Identities=9% Similarity=-0.090 Sum_probs=31.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|+++|.+..+..+++.+...|. .++++...++ =.++|++.|..
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-------------~~~~a~~lGa~ 242 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGE-------------KFPKAKALGAT 242 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG-------------GHHHHHHTTCS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH-------------HHHHHHHhCCc
Confidence 68889998888888887777787 5655433322 15678888875
No 330
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=49.58 E-value=28 Score=30.21 Aligned_cols=47 Identities=11% Similarity=0.174 Sum_probs=31.2
Q ss_pred CeEEEEcCCH-----HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSI-----SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
|||+|++.+. ..+++.++|.++||+|..+ +.+. ......+.|++++.
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~-~~~~-------------~~~~v~~~g~~~~~ 52 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMC-APPA-------------AEERLAEVGVPHVP 52 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEE-ECGG-------------GHHHHHHHTCCEEE
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEE-eCHH-------------HHHHHHHcCCeeee
Confidence 8999986664 4456778899999998654 4321 23444556777754
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=49.36 E-value=33 Score=29.53 Aligned_cols=44 Identities=11% Similarity=-0.039 Sum_probs=30.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|+++|.+..+..+.+.+...|. .|+++...++ =.++|++.|..
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-------------~~~~a~~lGa~ 238 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKD-------------KFPKAIELGAT 238 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGG-------------GHHHHHHTTCS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHH-------------HHHHHHHcCCc
Confidence 68899998888888877766676 4555433222 15678888975
No 332
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=49.24 E-value=20 Score=30.31 Aligned_cols=29 Identities=24% Similarity=0.289 Sum_probs=25.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC--cEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH--NIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~--~i~~V 29 (258)
|||+++|.+..+..+...|...++ +++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 899999999999999999988887 66544
No 333
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=49.09 E-value=64 Score=22.41 Aligned_cols=27 Identities=19% Similarity=0.174 Sum_probs=13.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~ 27 (258)
|||+++..+......|+.+++. |++++
T Consensus 10 ~~iLivdd~~~~~~~l~~~L~~~g~~v~ 37 (140)
T 3cg0_A 10 PGVLIVEDGRLAAATLRIQLESLGYDVL 37 (140)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHHTCEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHCCCeeE
Confidence 3555665555555555444432 44443
No 334
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=48.96 E-value=28 Score=29.80 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=23.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC-cEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH-NIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~-~i~~ 28 (258)
|||+++|.+..+..+...|...++ +++.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l 34 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVL 34 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 699999999999999988888776 5433
No 335
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=48.91 E-value=21 Score=30.65 Aligned_cols=31 Identities=6% Similarity=0.283 Sum_probs=26.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC-CcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE-HNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~-~~i~~Vvt 31 (258)
|+|++.| ++-.|..+.+.|++.| ++|+++.-
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 6899998 5678999999999999 98877643
No 336
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=48.59 E-value=25 Score=30.22 Aligned_cols=45 Identities=11% Similarity=0.093 Sum_probs=33.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
+|+++|++..+..+.+.+...|.+++++...+. =.++|++.|...
T Consensus 192 ~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~-------------~~~~~~~lGa~~ 236 (363)
T 3uog_A 192 RVVVQGTGGVALFGLQIAKATGAEVIVTSSSRE-------------KLDRAFALGADH 236 (363)
T ss_dssp EEEEESSBHHHHHHHHHHHHTTCEEEEEESCHH-------------HHHHHHHHTCSE
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEecCch-------------hHHHHHHcCCCE
Confidence 688999999999888888888888766543321 246788888753
No 337
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=48.32 E-value=19 Score=30.14 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=26.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|||+++|.. .+..+.+++.+.|++++.+-..
T Consensus 3 m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 3 VRIATYASH-SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp SEEEEESST-THHHHHHHHHHTTCCEEEESCG
T ss_pred eEEEEECCh-hHHHHHHHHHhCCCEEEEEECC
Confidence 799999999 8899999999999998766443
No 338
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=48.17 E-value=21 Score=26.38 Aligned_cols=26 Identities=23% Similarity=0.349 Sum_probs=23.1
Q ss_pred CeEEEEcC----CHHHHHHHHHHHhCCCcE
Q psy5230 1 MKIIFAGT----SISAAAILDTLYNSEHNI 26 (258)
Q Consensus 1 mrI~f~Gs----~~fa~~~L~~L~~~~~~i 26 (258)
.+|+|+|- +.++...++.|.+.|+++
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~G~~V 44 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSKGFEV 44 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEE
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHCCCEE
Confidence 37999999 789999999999999974
No 339
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=48.10 E-value=20 Score=30.00 Aligned_cols=30 Identities=10% Similarity=0.427 Sum_probs=25.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC---C---CcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS---E---HNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~---~---~~i~~Vv 30 (258)
|||++.| ++-.|..+.+.|++. | ++++++.
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~ 37 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLD 37 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEE
Confidence 8999998 678999999999996 6 7776654
No 340
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=47.82 E-value=13 Score=33.53 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=25.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS--EHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~--~~~i~~V 29 (258)
|||+|+|.+.+|.+.-..|.+. |++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~ 36 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVV 36 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEE
Confidence 7999999999999999999988 6887554
No 341
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=47.74 E-value=25 Score=33.44 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=43.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCC------------C----CccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR------------G----MKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr------------~----~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
||+++|.++.++.+++++.+.|+++++|-+.+|...-. . .-+....+.++|++.++..+.|
T Consensus 30 kILI~g~Geia~~iiraar~lGi~~vav~s~~d~~a~~~~~AD~~~~i~~~~~~~syld~~~i~~~a~~~~~daI~p 106 (675)
T 3u9t_A 30 RLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGAKPADSYLRGDRIIAAALASGAQAIHP 106 (675)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHTCSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCchhHhhCCEEEEcCCCccccCccCHHHHHHHHHHhCcCEEEe
Confidence 79999999999999999999999999988766544310 0 0011134666777777766554
No 342
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=53.44 E-value=3.9 Score=32.60 Aligned_cols=27 Identities=11% Similarity=0.028 Sum_probs=24.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|.+.++......|.+.|+++.
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~ 46 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVV 46 (201)
Confidence 799999999999999999998888764
No 343
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=47.60 E-value=24 Score=30.21 Aligned_cols=29 Identities=7% Similarity=0.154 Sum_probs=25.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
+||+|+|.+.+|...-..|.++|+++...
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~ 35 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLY 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEE
Confidence 48999999999999999999999987543
No 344
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=47.56 E-value=23 Score=31.95 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=29.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
.||+|+|.+.+|.+.-..|.++||+++++=..+.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4899999999999999999999999877655443
No 345
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=47.52 E-value=45 Score=29.50 Aligned_cols=50 Identities=10% Similarity=0.134 Sum_probs=37.1
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCC--CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGT-SISAAAILDTLYNSE--HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~~--~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
||+++|+ +.+|..+|+.+.++. ++++++.+..+ ..-+.+.|.+.++.++.
T Consensus 6 rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~n----------i~~l~~~~~~f~~~~v~ 58 (388)
T 1r0k_A 6 TVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRN----------VKDLADAAKRTNAKRAV 58 (388)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC----------HHHHHHHHHHTTCSEEE
T ss_pred EEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCC----------HHHHHHHHHHcCCcEEE
Confidence 7999999 999999999998863 66777755321 12367788888887653
No 346
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=47.35 E-value=60 Score=26.45 Aligned_cols=89 Identities=13% Similarity=0.123 Sum_probs=49.0
Q ss_pred CeEEEEcCC--H--HH-HHHHHHHHhCCCcEEEEEcCCCCCCCC-CC-ccCCcHHHHHHHHCCCcEE---c-cCC-CCCC
Q psy5230 1 MKIIFAGTS--I--SA-AAILDTLYNSEHNIVLILTKPDLHSGR-GM-KLNFSPVKKYALKHSIKII---Q-PIS-LKLN 68 (258)
Q Consensus 1 mrI~f~Gs~--~--fa-~~~L~~L~~~~~~i~~Vvt~pd~~~gr-~~-~~~~~~v~~~A~~~gIpv~---~-~~~-~~~~ 68 (258)
+||++++-. + ++ -.+|..+.++|+++..|+.. +-..|. +. ........+-|...|++.. . ++. +...
T Consensus 4 ~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~lT-~G~~g~~~~~~~R~~E~~~A~~~LGv~~~~~L~~~D~~~~~~ 82 (242)
T 2ixd_A 4 LHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICDLT-EADLSSNGTIELRKEEAKVAARIMGVKTRLNLAMPDRGLYMK 82 (242)
T ss_dssp CSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEEEE-CCTTCSSSCHHHHHHHHHHHHHHHTCCEEEEEEECTTCCCCC
T ss_pred ccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHcCCCeEEECCCCCCCCCCh
Confidence 467777654 2 33 36777788889887444332 111221 11 1222345667888899832 1 221 1111
Q ss_pred cccccchHHHHHHHhcCCCcEEEEE
Q psy5230 69 GKYHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
.+....+.+.+++.+||++++.
T Consensus 83 ---~~~~~~l~~~ir~~~PdvV~t~ 104 (242)
T 2ixd_A 83 ---EEYIREIVKVIRTYKPKLVFAP 104 (242)
T ss_dssp ---HHHHHHHHHHHHHHCCSEEEEE
T ss_pred ---HHHHHHHHHHHHHcCCCEEEEC
Confidence 1233366678899999999876
No 347
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=47.15 E-value=19 Score=30.18 Aligned_cols=32 Identities=6% Similarity=0.122 Sum_probs=26.4
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
++|++.| ++-.|..+.+.|++.|++|++++-.
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 38 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRD 38 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 4788888 6778999999999999998776543
No 348
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=47.05 E-value=38 Score=29.40 Aligned_cols=48 Identities=13% Similarity=0.037 Sum_probs=33.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCc-EEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHN-IVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~-i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+|+++|.+..+...++.+...|.. |+++-..+. =.++|++.|..++.+
T Consensus 188 ~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~-------------~~~~a~~lGa~~i~~ 236 (398)
T 1kol_A 188 TVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPA-------------RLAHAKAQGFEIADL 236 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH-------------HHHHHHHTTCEEEET
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHH-------------HHHHHHHcCCcEEcc
Confidence 688999998999888877777874 554433221 257889999876544
No 349
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=46.86 E-value=84 Score=26.55 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=33.8
Q ss_pred CeEEEEcCCHHHHHHH-HHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSISAAAIL-DTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L-~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
|||.|+|-...++..+ +.|++.|+++.+. |... ..+..+..++.|++++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~----D~~~-------~~~~~~~L~~~gi~v~~ 55 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGC----DAKM-------YPPMSTQLEALGIDVYE 55 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEE----ESSC-------CTTHHHHHHHTTCEEEE
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEE----cCCC-------CcHHHHHHHhCCCEEEC
Confidence 6899999999999755 5677888887543 2211 12344555677999874
No 350
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=46.45 E-value=18 Score=29.93 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=22.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC--CcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE--HNI 26 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~--~~i 26 (258)
|||+|+|.+.+|......|.+.+ +++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V 34 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKI 34 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEE
Confidence 68999999999999999998874 554
No 351
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=46.37 E-value=58 Score=27.63 Aligned_cols=47 Identities=17% Similarity=0.323 Sum_probs=30.1
Q ss_pred CeEEEEcCCHH-----HHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSIS-----AAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
|||+|+..+.. ...+.++|.++||++. ++|.+. ......+.|++++.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~-~~~~~~-------------~~~~~~~~g~~~~~ 52 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVV-MAANQD-------------MGPVVTGVGLPAVA 52 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEE-EEECGG-------------GHHHHHHTTCCEEE
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEE-EEeCHH-------------HHHHHHhCCCEEEE
Confidence 89999866643 3456678888899885 445321 23444556776654
No 352
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=46.30 E-value=37 Score=29.29 Aligned_cols=45 Identities=13% Similarity=0.092 Sum_probs=32.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
+|+++|.+..+.-+++.+...|. .|+++-..+. =.++|++.|...
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~-------------~~~~a~~lGa~~ 241 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK-------------KYETAKKFGVNE 241 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTT-------------HHHHHHTTTCCE
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH-------------HHHHHHHcCCcE
Confidence 58889998888888887777787 5655533322 156888999764
No 353
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=46.28 E-value=25 Score=29.96 Aligned_cols=45 Identities=7% Similarity=0.087 Sum_probs=33.9
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 2 KIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
+|++.| ++..+..+.+.+...|.+++++ ..++ =.+++++.|...+
T Consensus 153 ~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~-------------~~~~~~~lGa~~i 198 (343)
T 3gaz_A 153 TVLIQGGGGGVGHVAIQIALARGARVFAT-ARGS-------------DLEYVRDLGATPI 198 (343)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHH-------------HHHHHHHHTSEEE
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHH-------------HHHHHHHcCCCEe
Confidence 688999 8899999998888888887766 4322 1467788887763
No 354
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=46.17 E-value=30 Score=29.70 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=26.5
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
|+|++.|. +-.|..+.+.|++.|++|+++.-.
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCccHHHHHHHHHHHHCCCeEEEEECC
Confidence 68999987 568999999999999998776543
No 355
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=46.11 E-value=40 Score=29.44 Aligned_cols=60 Identities=8% Similarity=0.142 Sum_probs=41.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~~ 62 (258)
||+++|.+..++++-..|.+.|.++. ++...+....|.. ......+.+..+++||.++.-
T Consensus 147 ~vvViGgG~~g~E~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~ 207 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATARTAGVHVS-LVETQPRLMSRAAPATLADFVARYHAAQGVDLRFE 207 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEE-EEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeC
Confidence 78999999999999999999888764 5555444433211 001123566788899998754
No 356
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=46.03 E-value=38 Score=30.56 Aligned_cols=32 Identities=9% Similarity=-0.031 Sum_probs=28.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
|++++|.++.+....+.|.+.|.+++.++|.-
T Consensus 315 rv~i~~~~~~~~~l~~~L~elGm~vv~~~~~~ 346 (458)
T 3pdi_B 315 RTAIAADPDLLLGFDALLRSMGAHTVAAVVPA 346 (458)
T ss_dssp EEEEECCHHHHHHHHHHHHTTTCEEEEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEEECC
Confidence 78999999999999999988999999999853
No 357
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=46.00 E-value=23 Score=28.47 Aligned_cols=30 Identities=13% Similarity=0.358 Sum_probs=24.9
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||++.| ++..|..+.+.|++ |++++++.-
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r 31 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYN 31 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEES
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecC
Confidence 8999999 56789999999985 788876654
No 358
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=45.94 E-value=41 Score=27.46 Aligned_cols=48 Identities=21% Similarity=0.104 Sum_probs=33.9
Q ss_pred EEEcCCHHHHHHHHHHHhC----CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCC
Q psy5230 4 IFAGTSISAAAILDTLYNS----EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPIS 64 (258)
Q Consensus 4 ~f~Gs~~fa~~~L~~L~~~----~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~ 64 (258)
+=+||++-+....+.|.+. +.++.+|-|. ..-.+.|+++|||+...+.
T Consensus 25 vGlGTGSTv~~~i~~L~~~~~~~~l~i~~V~tS-------------~~t~~~a~~~Gi~l~~l~~ 76 (228)
T 4gmk_A 25 VGLGTGSTVKYMVDALGKRVNEEGLDIVGVTTS-------------IRTAEQAKSLGIVIKDIDE 76 (228)
T ss_dssp EEECCSHHHHHHHHHHHHHHHHHCCCCEEEESS-------------HHHHHHHHHTTCCBCCGGG
T ss_pred EEECchHHHHHHHHHHHHHHhhcCCcEEEEeCc-------------HHHHHHHHHcCCceeChHH
Confidence 4469998777777777542 5678777653 2357899999999976543
No 359
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=45.72 E-value=18 Score=30.50 Aligned_cols=32 Identities=16% Similarity=0.244 Sum_probs=26.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~~Vvt~ 32 (258)
|||+++|.+.+|...++.|.+. ++++++|+..
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~ 42 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRR 42 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 5899999999999999999875 5788888753
No 360
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=45.65 E-value=25 Score=29.18 Aligned_cols=28 Identities=11% Similarity=0.070 Sum_probs=25.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVL 28 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~ 28 (258)
+||+|+|.+.++..+...|.++|++++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l 32 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTA 32 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 3899999999999999999999998754
No 361
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=45.64 E-value=15 Score=32.68 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=29.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
||+++|.++.+..+.+++.+.|+++++|.+.++
T Consensus 8 kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~~~~ 40 (446)
T 3ouz_A 8 SILIANRGEIALRALRTIKEMGKKAICVYSEAD 40 (446)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEEcCcc
Confidence 799999999999999999999999988877654
No 362
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=45.46 E-value=58 Score=27.74 Aligned_cols=71 Identities=11% Similarity=0.046 Sum_probs=43.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCcccccchHHHH
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~~~~~~~~~~ 79 (258)
+|+++|.+..+..+.+.+...|. +++++...+. =.++|++.|... +.+...++. ++.
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-------------~~~~a~~lGa~~vi~~~~~~~~--------~~~ 232 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSAT-------------RLSKAKEIGADLVLQISKESPQ--------EIA 232 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH-------------HHHHHHHTTCSEEEECSSCCHH--------HHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-------------HHHHHHHhCCCEEEcCcccccc--------hHH
Confidence 68889998888888887777787 5655543221 257888888753 333210012 444
Q ss_pred HHHhc---CCCcEEEEE
Q psy5230 80 KLLNK---IEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~---~~~Dl~vv~ 93 (258)
+.+++ ..+|++|-+
T Consensus 233 ~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 233 RKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp HHHHHHHTSCCSEEEEC
T ss_pred HHHHHHhCCCCCEEEEC
Confidence 44433 468988643
No 363
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=45.43 E-value=48 Score=26.66 Aligned_cols=88 Identities=11% Similarity=0.071 Sum_probs=49.1
Q ss_pred CeEEEEcCC--H--H-HHHHHHHHHhCCCcEE-EEEcCCCCCCCC-CC-ccCCcHHHHHHHHCCCcEEc----cCC-CCC
Q psy5230 1 MKIIFAGTS--I--S-AAAILDTLYNSEHNIV-LILTKPDLHSGR-GM-KLNFSPVKKYALKHSIKIIQ----PIS-LKL 67 (258)
Q Consensus 1 mrI~f~Gs~--~--f-a~~~L~~L~~~~~~i~-~Vvt~pd~~~gr-~~-~~~~~~v~~~A~~~gIpv~~----~~~-~~~ 67 (258)
|||++++-. + + +-.+|..+.++|+++. .++|.-+ .|. +. ........+-|...|++.+. ++. +..
T Consensus 2 ~~vL~v~aHPDDe~l~~ggtia~~~~~G~~v~vv~lT~G~--~g~~~~~~~R~~E~~~A~~~lG~~~~~~l~~~D~~l~~ 79 (227)
T 1uan_A 2 LDLLVVAPHPDDGELGCGGTLARAKAEGLSTGILDLTRGE--MGSKGTPEEREKEVAEASRILGLDFRGNLGFPDGGLAD 79 (227)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEEEECCT--TTCCSCHHHHHHHHHHHHHHHTCSEEEEEEECTTCCCC
T ss_pred ceEEEEEeCCCcHHHhHHHHHHHHHhCCCcEEEEEEcCCC--CCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCC
Confidence 467777654 2 3 3357777778898874 3344322 121 11 12223456678888987422 221 211
Q ss_pred CcccccchHHHHHHHhcCCCcEEEEE
Q psy5230 68 NGKYHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
. .++...+.+.++..+||++++.
T Consensus 80 ~---~~~~~~l~~~ir~~~P~~V~t~ 102 (227)
T 1uan_A 80 V---PEQRLKLAQALRRLRPRVVFAP 102 (227)
T ss_dssp C---HHHHHHHHHHHHHHCEEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCCCEEEeC
Confidence 1 1233366678899999999876
No 364
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=45.41 E-value=14 Score=32.09 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=25.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC-------CcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE-------HNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~-------~~i~~V 29 (258)
|||+|+|.+.+|...-..|.++| +++..+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~ 57 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMW 57 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEE
Confidence 58999999999999999999888 787533
No 365
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=45.36 E-value=70 Score=28.67 Aligned_cols=50 Identities=8% Similarity=0.100 Sum_probs=36.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
++|+++|.+..|....+.|++.|.++. |+.+ + ....+.+++.+.++.++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~-vi~~-~---------~~~~~~~l~~~~~i~~~~ 62 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLT-VNAL-T---------FIPQFTVWANEGMLTLVE 62 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEE-EEES-S---------CCHHHHHHHTTTSCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEE-EEcC-C---------CCHHHHHHHhcCCEEEEE
Confidence 589999999999999999999987664 5553 1 112456666666776654
No 366
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=45.30 E-value=53 Score=28.38 Aligned_cols=31 Identities=6% Similarity=0.017 Sum_probs=24.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-CCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYN-SEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~-~~~~i~~Vvt 31 (258)
.+|+|+|++..|...+.+|.. .+.+.+.|+.
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~ 161 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYD 161 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEEC
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEc
Confidence 479999999999999988865 3566666665
No 367
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=45.27 E-value=74 Score=22.08 Aligned_cols=31 Identities=13% Similarity=0.106 Sum_probs=19.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHh--CCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYN--SEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~--~~~~i~~Vvt 31 (258)
|||+++..+......|..+++ .|++++..++
T Consensus 9 ~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~ 41 (143)
T 3cnb_A 9 FSILIIEDDKEFADMLTQFLENLFPYAKIKIAY 41 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred ceEEEEECCHHHHHHHHHHHHhccCccEEEEEC
Confidence 467777777777777766554 3566444443
No 368
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=45.19 E-value=23 Score=35.95 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=32.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHS 37 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~ 37 (258)
||+++|.++.++++++++.+.|+++++|-+.+|...
T Consensus 6 kVLIagrGeia~riiraa~elGi~vVav~s~~d~~s 41 (1150)
T 3hbl_A 6 KLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSS 41 (1150)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCcccc
Confidence 799999999999999999999999999988776543
No 369
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=45.14 E-value=1.2e+02 Score=24.38 Aligned_cols=87 Identities=10% Similarity=0.085 Sum_probs=46.2
Q ss_pred EEcCCH--HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHHHH
Q psy5230 5 FAGTSI--SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKLL 82 (258)
Q Consensus 5 f~Gs~~--fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~~l 82 (258)
+++++. .+....+.|++.|+.-+++++.+..... ...+..-..+.+.++|+++....-......+......+.+++
T Consensus 106 ~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~--~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (288)
T 3gv0_A 106 FHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSRFSF--HDHARKGFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRLM 183 (288)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCCEEEEECCCTTSHH--HHHHHHHHHHHHHHTTCEECCCCSCCTTSCHHHHHHHHHHHT
T ss_pred EEEeCcHHHHHHHHHHHHHCCCCeEEEEcCCcccch--HHHHHHHHHHHHHHcCCCcchhheeccccchHHHHHHHHHHH
Confidence 445554 4567788999999988888876432110 011223467788899998632211111100000001333455
Q ss_pred hcC-CCcEEEEE
Q psy5230 83 NKI-EFDIMIVM 93 (258)
Q Consensus 83 ~~~-~~Dl~vv~ 93 (258)
+.. .+|.+++.
T Consensus 184 ~~~~~~~ai~~~ 195 (288)
T 3gv0_A 184 QSSDRPDGIVSI 195 (288)
T ss_dssp TSSSCCSEEEES
T ss_pred hCCCCCcEEEEc
Confidence 443 58888876
No 370
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=44.96 E-value=54 Score=28.12 Aligned_cols=44 Identities=9% Similarity=-0.057 Sum_probs=31.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|++.|.+..+..+.+.+...|. .|+++...++ =.++|++.|..
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~-------------~~~~~~~lGa~ 238 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKD-------------KFAKAKEVGAT 238 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG-------------GHHHHHHTTCS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH-------------HHHHHHHhCCc
Confidence 58889998889888888777787 5655433221 15678888875
No 371
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=44.75 E-value=55 Score=28.08 Aligned_cols=44 Identities=14% Similarity=0.037 Sum_probs=30.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|+++|.+..+..+.+.+...|. .|+++...+. =.++|++.|..
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~-------------~~~~~~~lGa~ 239 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPD-------------KFEKAKVFGAT 239 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG-------------GHHHHHHTTCC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-------------HHHHHHHhCCc
Confidence 58889998888888888777787 4555433221 14678888875
No 372
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=44.74 E-value=26 Score=29.04 Aligned_cols=28 Identities=7% Similarity=0.243 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||+.+|++..|..+++. . +.++++|+.
T Consensus 13 ~rV~i~G~GaIG~~v~~~--~-~leLv~v~~ 40 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL--G-NFEKIYAYD 40 (253)
T ss_dssp CEEEEECCSHHHHHHHHH--S-CCSEEEEEC
T ss_pred ceEEEECcCHHHHHHHhc--C-CcEEEEEEe
Confidence 899999999999999998 4 799999887
No 373
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=44.65 E-value=50 Score=29.71 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=25.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHh----------CCCcEEEEEcC
Q psy5230 1 MKIIFAGTSISAAAILDTLYN----------SEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~----------~~~~i~~Vvt~ 32 (258)
|||+++|.+..|...++.|.+ .+.++++|+..
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~ 52 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR 52 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC
Confidence 489999999999998887764 24678888764
No 374
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=44.52 E-value=21 Score=30.26 Aligned_cols=28 Identities=18% Similarity=0.282 Sum_probs=25.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
||.|+|-+.++.+.-..|+++||++. |+
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~v~-v~ 32 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYLLN-VF 32 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEE-EE
T ss_pred EEEEeeehHHHHHHHHHHHhCCCeEE-EE
Confidence 79999999999999999999998863 44
No 375
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=44.43 E-value=16 Score=30.67 Aligned_cols=30 Identities=13% Similarity=0.249 Sum_probs=26.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|+|+++|.+..|....+.|++.|++|. ||.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~Vt-Via 43 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLT-LVS 43 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEE-EEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEE-EEc
Confidence 689999999999999999999998864 444
No 376
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=44.33 E-value=14 Score=30.67 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=24.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~V 29 (258)
|+|++.| ++-.|..+.+.|++.|++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~ 33 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVL 33 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEE
Confidence 5899998 5678999999999999887554
No 377
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=44.27 E-value=78 Score=24.86 Aligned_cols=72 Identities=11% Similarity=0.183 Sum_probs=42.8
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHC-CCcEEccCCCCCCcccccchHHHH
Q psy5230 2 KIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKH-SIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~-gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
+|++.|. ...+..+.+.|.+.|++++.+...+ ..+.+.+.+. ++.++.. ++.+.. .+.
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~------------~~~~~~~~~~~~~~~~~~-D~~~~~-------~~~ 68 (244)
T 3d3w_A 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ------------ADLDSLVRECPGIEPVCV-DLGDWE-------ATE 68 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH------------HHHHHHHHHSTTCEEEEC-CTTCHH-------HHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH------------HHHHHHHHHcCCCCEEEE-eCCCHH-------HHH
Confidence 5777776 5799999999999998876543211 1234444443 5655532 344431 333
Q ss_pred HHHhcC-CCcEEEEE
Q psy5230 80 KLLNKI-EFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~-~~Dl~vv~ 93 (258)
+.++.+ .+|++|-.
T Consensus 69 ~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 69 RALGSVGPVDLLVNN 83 (244)
T ss_dssp HHHTTCCCCCEEEEC
T ss_pred HHHHHcCCCCEEEEC
Confidence 444433 57988765
No 378
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=44.24 E-value=27 Score=25.99 Aligned_cols=103 Identities=11% Similarity=0.066 Sum_probs=62.5
Q ss_pred CeEEEEcCC---HHHHHHHHHHHhC--CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHH-CCCcEEccCCCCCCcccccc
Q psy5230 1 MKIIFAGTS---ISAAAILDTLYNS--EHNIVLILTKPDLHSGRGMKLNFSPVKKYALK-HSIKIIQPISLKLNGKYHKI 74 (258)
Q Consensus 1 mrI~f~Gs~---~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~-~gIpv~~~~~~~~~~~~~~~ 74 (258)
|+|++.-.+ +-.++..+.+.+. ||++++==+ -..+-++ +||++-...+....+
T Consensus 4 ~~ialsv~D~dK~~~v~~a~~~~~ll~Gf~l~AT~g----------------Ta~~L~e~~Gl~v~~v~k~~~eG----- 62 (134)
T 2xw6_A 4 RALALIAHDAKKEEMVAFCQRHREVLARFPLVATGT----------------TGRRIEEATGLTVEKLLSGPLGG----- 62 (134)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSCEEECHH----------------HHHHHHHHHCCCCEECSCGGGTH-----
T ss_pred cEEEEEEecccHHHHHHHHHHHHHHhCCCEEEEccH----------------HHHHHHHhhCceEEEEEecCCCC-----
Confidence 678887776 3455666667666 898853211 2344444 899997766543111
Q ss_pred hHHHHHHHhcCCCcEEEEEee--C--C-CCCHHHHHHHH---------HHHHHHHHHHHHHHHH
Q psy5230 75 ANETHKLLNKIEFDIMIVMGI--L--P-EDTSLTLQNKL---------EKLSKILIIDTIKKIE 124 (258)
Q Consensus 75 ~~~~~~~l~~~~~Dl~vv~~I--~--~-~dt~~~L~~kl---------~~~g~~ll~~~l~~l~ 124 (258)
.+.+.+.+++.+.|++|-.+= . + ......|..-. ...+++.+++.|..+.
T Consensus 63 ~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~latA~a~v~al~~~~ 126 (134)
T 2xw6_A 63 DQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPMAAEALIPWLQSLV 126 (134)
T ss_dssp HHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHHHHHHHHHHHHTCT
T ss_pred cchHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHHHHHHHHHHHHHHh
Confidence 117889999999999987732 2 2 22233333222 2356777887776544
No 379
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=44.21 E-value=53 Score=27.47 Aligned_cols=32 Identities=16% Similarity=0.059 Sum_probs=26.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
+||+++|. +.++...++.|.+.++++++.|.+
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p 40 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTP 40 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 68999996 899999999998888887766653
No 380
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=44.04 E-value=21 Score=30.23 Aligned_cols=24 Identities=21% Similarity=0.117 Sum_probs=21.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH 24 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~ 24 (258)
|||+++|.+.++..+...|...++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~ 24 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLD 24 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC
Confidence 999999999999999988888775
No 381
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=43.82 E-value=27 Score=28.92 Aligned_cols=30 Identities=10% Similarity=0.176 Sum_probs=25.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|++.|. +-.|..+.+.|++.|++|+++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCG 33 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEc
Confidence 58999986 6789999999999999887664
No 382
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=43.40 E-value=28 Score=30.61 Aligned_cols=36 Identities=6% Similarity=0.049 Sum_probs=30.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSG 38 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~g 38 (258)
||+++|.+..+..+.+++.+.|++++.+- .++.+..
T Consensus 26 ~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~ 61 (403)
T 3k5i_A 26 KVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAK 61 (403)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTG
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHH
Confidence 89999999999999999999999987776 6655543
No 383
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=43.30 E-value=13 Score=33.19 Aligned_cols=23 Identities=17% Similarity=0.362 Sum_probs=19.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE 23 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~ 23 (258)
|||+++|++.-...+..+|.++.
T Consensus 22 m~ilvlG~ggre~ala~~l~~s~ 44 (442)
T 3lp8_A 22 MNVLVIGSGGREHSMLHHIRKST 44 (442)
T ss_dssp EEEEEEECSHHHHHHHHHHTTCT
T ss_pred CEEEEECCChHHHHHHHHHHhCC
Confidence 89999999977777778887763
No 384
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=43.25 E-value=46 Score=29.59 Aligned_cols=59 Identities=7% Similarity=0.069 Sum_probs=39.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
||+++|.+..++++-..|.+.|.++. |+...+....+-.......+.+..+++||.++.
T Consensus 171 ~vvViGgG~~g~e~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~ 229 (464)
T 2eq6_A 171 RLLVIGGGAVGLELGQVYRRLGAEVT-LIEYMPEILPQGDPETAALLRRALEKEGIRVRT 229 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EECSSSSSSTTSCHHHHHHHHHHHHHTTCEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEE-EEEcCCccccccCHHHHHHHHHHHHhcCCEEEc
Confidence 78999999999999999998887764 555433322110000112356677889999864
No 385
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=43.22 E-value=28 Score=30.07 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=31.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLH 36 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~ 36 (258)
|||++||-+.=...+|..|.+...++.+|||-.|.-
T Consensus 5 ~~IV~igGGtGl~~ll~gLk~~~~~iTaIVtvaDDG 40 (326)
T 2q7x_A 5 PXITVIGGGTGSPVILXSLREXDVEIAAIVTVADDG 40 (326)
T ss_dssp CEEEEECCCTTHHHHHHHHHHSSCEEEEEECCBSCG
T ss_pred CeEEEEcCcccHHHHHHHhccCCCCeEEEEECccCC
Confidence 689999999888889999988888999999987653
No 386
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=43.14 E-value=31 Score=28.03 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=25.0
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 2 KIIFAG-TSISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
+|++.| +...|..+.+.|.+.|++++.+.-.+
T Consensus 5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSP 37 (267)
T ss_dssp EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence 477777 67899999999999888876655444
No 387
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=43.05 E-value=38 Score=28.45 Aligned_cols=83 Identities=13% Similarity=0.095 Sum_probs=40.3
Q ss_pred CeEEEEcCCH----HHHHHHHHHHhC-C-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCcccc-
Q psy5230 1 MKIIFAGTSI----SAAAILDTLYNS-E-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNGKYH- 72 (258)
Q Consensus 1 mrI~f~Gs~~----fa~~~L~~L~~~-~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~~~- 72 (258)
|||+|+.... ...++++.|.+. + ++++.++|... . ....+.....++++ +...-.......+
T Consensus 9 mkIl~v~~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (375)
T 3beo_A 9 LKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTAQH------R----QMLDQVLSIFGITPDFDLNIMKDRQTLID 78 (375)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSS------S----HHHHHHHHHHTCCCSEECCCCCTTCCHHH
T ss_pred ceEEEEecCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCC------H----HHHHHHHHHcCCCCccccccCCCcccHHH
Confidence 7999985432 223566777665 3 56655555321 0 12334444466654 2111000000000
Q ss_pred ---cchHHHHHHHhcCCCcEEEEE
Q psy5230 73 ---KIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 73 ---~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
.....+...+++.+||++++.
T Consensus 79 ~~~~~~~~l~~~l~~~~pDvv~~~ 102 (375)
T 3beo_A 79 ITTRGLEGLDKVMKEAKPDIVLVH 102 (375)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEe
Confidence 001135567788899999874
No 388
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=42.94 E-value=46 Score=29.38 Aligned_cols=59 Identities=14% Similarity=0.093 Sum_probs=39.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
+|+++|.+..++++-..|.+.|.++. |+...++...+-.......+.+..+++||.++.
T Consensus 172 ~vvViGgG~~g~e~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 230 (455)
T 1ebd_A 172 SLVVIGGGYIGIELGTAYANFGTKVT-ILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT 230 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHcCCcEE-EEEcCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 68999999999999999999887764 555433322110000112355667889999865
No 389
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=42.46 E-value=22 Score=29.66 Aligned_cols=30 Identities=13% Similarity=0.333 Sum_probs=24.8
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC--CcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE--HNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~--~~i~~Vv 30 (258)
|||++.| ++-.|..+.+.|++.| ++++++.
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~ 36 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINID 36 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 7899999 5778999999999986 7776554
No 390
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=42.44 E-value=52 Score=26.27 Aligned_cols=72 Identities=10% Similarity=0.078 Sum_probs=42.2
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHH
Q psy5230 2 KIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHK 80 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~ 80 (258)
++++.|. ...+..+.+.|.+.|++++.+.-. ...+.+.+.+.|+.++.. ++.+.. ++.+
T Consensus 7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~-D~~~~~-------~~~~ 66 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFAKEGARLVACDIE------------EGPLREAAEAVGAHPVVM-DVADPA-------SVER 66 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC------------HHHHHHHHHTTTCEEEEC-CTTCHH-------HHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHHHcCCEEEEe-cCCCHH-------HHHH
Confidence 4677765 468999999999999987654321 123555666656544443 343331 2222
Q ss_pred HHhc-----CCCcEEEEE
Q psy5230 81 LLNK-----IEFDIMIVM 93 (258)
Q Consensus 81 ~l~~-----~~~Dl~vv~ 93 (258)
.++. ..+|++|-.
T Consensus 67 ~~~~~~~~~g~id~lvn~ 84 (245)
T 1uls_A 67 GFAEALAHLGRLDGVVHY 84 (245)
T ss_dssp HHHHHHHHHSSCCEEEEC
T ss_pred HHHHHHHHcCCCCEEEEC
Confidence 2222 268988765
No 391
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=42.35 E-value=49 Score=29.41 Aligned_cols=59 Identities=7% Similarity=0.032 Sum_probs=39.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
+|+++|.+..++++-..|.+.|.++. ++...++....-.......+.+..+++||.++.
T Consensus 185 ~vvViGgG~~g~e~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 243 (478)
T 1v59_A 185 RLTIIGGGIIGLEMGSVYSRLGSKVT-VVEFQPQIGASMDGEVAKATQKFLKKQGLDFKL 243 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEE-EEEeCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 68999999999999999999888764 555433332210000112356677889999864
No 392
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=42.33 E-value=27 Score=28.86 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=25.3
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
++|++.| ++-.|..+.+.|+++|+++++++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEE
Confidence 5788998 56789999999999999987654
No 393
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=42.31 E-value=57 Score=28.90 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=30.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR 39 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr 39 (258)
++|+++|.+-.++.+-..|.+.|+++ .|+-..++.-||
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~g~~v-~v~E~~~~~GG~ 49 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKAGYKV-TVLEARTRPGGR 49 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECSSSSSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCE-EEEeccCCCCCc
Confidence 58999999999999999999988865 566665666665
No 394
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=42.31 E-value=12 Score=32.00 Aligned_cols=23 Identities=17% Similarity=0.192 Sum_probs=21.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE 23 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~ 23 (258)
|||+|+|.+.+|......|.++|
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g 31 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNA 31 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcC
Confidence 69999999999999999999887
No 395
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=42.11 E-value=81 Score=21.62 Aligned_cols=25 Identities=20% Similarity=0.280 Sum_probs=15.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHN 25 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~ 25 (258)
+||+++..+......++.+++.+++
T Consensus 5 ~~ilivdd~~~~~~~l~~~l~~~~~ 29 (133)
T 3nhm_A 5 PKVLIVENSWTMRETLRLLLSGEFD 29 (133)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSE
T ss_pred CEEEEEcCCHHHHHHHHHHHhCCcE
Confidence 4667777766666666666664444
No 396
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=41.90 E-value=17 Score=31.92 Aligned_cols=29 Identities=10% Similarity=0.168 Sum_probs=24.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-CCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYN-SEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~-~~~~i~~V 29 (258)
|||+|+|.+.+|...-..|.+ +|+++..+
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~ 32 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVL 32 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEE
Confidence 699999999999999888877 48887644
No 397
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=41.85 E-value=24 Score=29.52 Aligned_cols=27 Identities=15% Similarity=0.265 Sum_probs=24.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+|+|++......++.|.+.|+++.
T Consensus 6 m~i~v~~~~~~~~~~~~~L~~~g~~v~ 32 (293)
T 3d4o_A 6 KHVVIIGGDARQLEIIRKLSTFDAKIS 32 (293)
T ss_dssp CEEEEECBCHHHHHHHHHHHHTTCEEE
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCEEE
Confidence 899999999999999999999888874
No 398
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=41.81 E-value=23 Score=29.95 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=23.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC-cE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH-NI 26 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~-~i 26 (258)
|||+++|.+.++..+...|...|+ ++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V 31 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADV 31 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceE
Confidence 689999999999999999998887 64
No 399
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.81 E-value=29 Score=29.62 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=25.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||+++|.+--|+.+--.|.+.|+++ .|+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v-~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKV-TIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCE-EEE
Confidence 99999999999998888999999886 455
No 400
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=41.79 E-value=59 Score=27.22 Aligned_cols=44 Identities=11% Similarity=0.080 Sum_probs=31.7
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|++.|. +..+..+.+.+...|.+++++...+++ .+++++.|..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~-------------~~~~~~lGa~ 196 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-------------HDYLRVLGAK 196 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-------------HHHHHHTTCS
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------------HHHHHHcCCc
Confidence 5788885 889998888887788887666543321 4677788865
No 401
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=41.47 E-value=34 Score=28.89 Aligned_cols=45 Identities=7% Similarity=0.015 Sum_probs=32.4
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 2 KIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
+|++.| ++..+..+.+.+...|.+++++...++ =.+++++.|...
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-------------~~~~~~~~ga~~ 196 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE-------------KLKIAKEYGAEY 196 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH-------------HHHHHHHTTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH-------------HHHHHHHcCCcE
Confidence 578888 888999999888888887766554221 145788888653
No 402
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=41.39 E-value=43 Score=29.68 Aligned_cols=23 Identities=22% Similarity=0.130 Sum_probs=19.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSE 23 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~ 23 (258)
|||+++|++.-...+..+|.+++
T Consensus 4 mkvlviG~ggre~ala~~l~~s~ 26 (431)
T 3mjf_A 4 MNILIIGNGGREHALGWKAAQSP 26 (431)
T ss_dssp EEEEEEECSHHHHHHHHHHTTCT
T ss_pred cEEEEECCCHHHHHHHHHHHhCC
Confidence 79999999977777788887764
No 403
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=41.35 E-value=44 Score=28.92 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=33.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCC-CcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSE-HNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~-~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
+|++.|++..+..+++.+...| .+++++...+. =.++|++.|...
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-------------~~~~~~~lGa~~ 243 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPN-------------RLKLAEEIGADL 243 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHH-------------HHHHHHHTTCSE
T ss_pred EEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHH-------------HHHHHHHcCCcE
Confidence 6899999999998888887778 57776654321 256788888753
No 404
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=41.08 E-value=49 Score=25.97 Aligned_cols=29 Identities=14% Similarity=0.142 Sum_probs=22.3
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 2 KIIFAG-TSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
+|++.| +...|..+.+.|.+.|++++.+.
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 36 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMA 36 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 366665 45689999999999999876553
No 405
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=40.95 E-value=31 Score=28.17 Aligned_cols=58 Identities=12% Similarity=0.129 Sum_probs=40.1
Q ss_pred EcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCC-CCCCccCCcHHHHHHHHCCCcEEccCCC
Q psy5230 6 AGTSISAAAILDTLYNSEHNIVLILTKPDLHS-GRGMKLNFSPVKKYALKHSIKIIQPISL 65 (258)
Q Consensus 6 ~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~-gr~~~~~~~~v~~~A~~~gIpv~~~~~~ 65 (258)
+-|+.-...+.+.|.+.|.++++|++--|+.. || .-..+.+++..++.|+|++.--++
T Consensus 146 itTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~--~~~~~a~~~~~~~~gv~v~sL~~~ 204 (232)
T 3mjd_A 146 MTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAK--DSDISATKKISQDFNIPVLAVTNF 204 (232)
T ss_dssp CSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCT--TSSSCHHHHHHHHHCCCEEEEEEH
T ss_pred ccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCc--cccchhHHHHHHHcCCcEEEEEeH
Confidence 35667777888888888888777766545443 33 123567888888899999765443
No 406
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=40.93 E-value=31 Score=28.05 Aligned_cols=47 Identities=17% Similarity=0.113 Sum_probs=34.4
Q ss_pred EEEEcCCHHHHHHHHHHHhC----CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 3 IIFAGTSISAAAILDTLYNS----EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 3 I~f~Gs~~fa~~~L~~L~~~----~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
++++||++-.....+.|.+. +.++.+ ||.. ....+.+.++|||++..
T Consensus 21 vIgLGsGST~~~~i~~L~~~~~~~~~~i~~-VttS------------~~t~~~l~~~Gi~l~~l 71 (225)
T 3l7o_A 21 IVGLGTGSTAYYFVEEVGRRVQEEGLQVIG-VTTS------------SRTTAQAQALGIPLKSI 71 (225)
T ss_dssp EEEECCSTTHHHHHHHHHHHHHHHCCCCEE-EESS------------HHHHHHHHHHTCCBCCG
T ss_pred EEEECCcHHHHHHHHHHHHhhhhcCCCEEE-EcCC------------HHHHHHHhccCceEEec
Confidence 68999998888888887664 456654 5532 23578899999999754
No 407
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=40.74 E-value=16 Score=32.58 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=30.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDL 35 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 35 (258)
||+++|.+..+..+++++.+.|+++++|-+.++.
T Consensus 8 ~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~ 41 (461)
T 2dzd_A 8 KVLVANRGEIAIRVFRACTELGIRTVAIYSKEDV 41 (461)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCEEEEEECGGGT
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECCccc
Confidence 7999999999999999999999999888776653
No 408
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=40.71 E-value=1.1e+02 Score=24.24 Aligned_cols=29 Identities=17% Similarity=0.149 Sum_probs=22.8
Q ss_pred eEEEEcCC-HHHHHHHHHHHhCCCcEEEEE
Q psy5230 2 KIIFAGTS-ISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 2 rI~f~Gs~-~fa~~~L~~L~~~~~~i~~Vv 30 (258)
+|++.|.. .++..+.+.|.+.|++++.+.
T Consensus 14 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 43 (265)
T 2o23_A 14 VAVITGGASGLGLATAERLVGQGASAVLLD 43 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 46777654 689999999999999876653
No 409
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=40.70 E-value=15 Score=32.71 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=29.4
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPD 34 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd 34 (258)
||+++|.+..+..+.+++.+.|+++++|.+.++
T Consensus 4 ~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~ 36 (451)
T 1ulz_A 4 KVLVANRGEIAVRIIRACKELGIPTVAIYNEVE 36 (451)
T ss_dssp SEEECCCHHHHHHHHHHHHHHTCCEEEEECGGG
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEechhh
Confidence 799999999999999999999999988877554
No 410
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=40.57 E-value=32 Score=29.04 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=25.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS--EHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~--~~~i~~Vvt 31 (258)
|||+++|.+.++..+...|... +++++.+=.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~ 33 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDV 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 8999999999999999888875 577765543
No 411
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=40.35 E-value=48 Score=28.68 Aligned_cols=35 Identities=9% Similarity=-0.034 Sum_probs=29.4
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLH 36 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~ 36 (258)
+|+++|.+..+..+.+++.+.|++++.+=..|+.+
T Consensus 16 ~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~ 50 (389)
T 3q2o_A 16 TIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSP 50 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCT
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc
Confidence 79999999999999999999999987765444443
No 412
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=40.34 E-value=35 Score=28.35 Aligned_cols=31 Identities=10% Similarity=0.198 Sum_probs=25.9
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|+|++.|. +-.|..+.+.|++.|++++++.-
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 68999986 67899999999999998876643
No 413
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=40.30 E-value=55 Score=29.10 Aligned_cols=58 Identities=9% Similarity=0.155 Sum_probs=39.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~ 61 (258)
||+++|.+..++++...|.+.|.++ .++...++.. +.. ......+.+..+++||.++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~V-tlv~~~~~~l-~~~d~~~~~~~~~~l~~~gv~i~~ 247 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSALGSKT-SLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLK 247 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEE-EEECSSSSSC-TTSCHHHHHHHHHHHHHTTCEEET
T ss_pred cEEEECCCHHHHHHHHHHHHcCCeE-EEEEeCCccc-cccCHHHHHHHHHHHHHCCCEEEe
Confidence 7899999999999999999988776 4555433322 111 00112356677889999865
No 414
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=40.22 E-value=20 Score=32.48 Aligned_cols=29 Identities=7% Similarity=0.233 Sum_probs=25.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS--EHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~--~~~i~~V 29 (258)
|||+|+|.+.+|.+.-..|.+. |++++++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~ 40 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVV 40 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEE
Confidence 7999999999999999999887 6777665
No 415
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=40.14 E-value=47 Score=28.29 Aligned_cols=36 Identities=14% Similarity=0.153 Sum_probs=29.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHS 37 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~ 37 (258)
||+++|....+.....+..+.|++++.|=..|+.+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~ 38 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALI 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChh
Confidence 688999999999999999999999987755555443
No 416
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=40.00 E-value=15 Score=31.62 Aligned_cols=26 Identities=23% Similarity=0.374 Sum_probs=22.7
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCCCcE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSEHNI 26 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~~~i 26 (258)
|||++.| ++-.|..+++.|.+++|++
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~ 27 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPL 27 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc
Confidence 8999999 9999999999998766543
No 417
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=39.99 E-value=34 Score=28.64 Aligned_cols=33 Identities=6% Similarity=0.131 Sum_probs=22.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-C-CcEEEEEcCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-E-HNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~-~~i~~Vvt~pd 34 (258)
|||+++|++.. ..+.+.|.++ + ++++++-..|+
T Consensus 5 ~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~~~ 39 (331)
T 2pn1_A 5 PHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCSPL 39 (331)
T ss_dssp CEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESCTT
T ss_pred ceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCCCc
Confidence 78999999865 4566777765 5 66665544433
No 418
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=39.94 E-value=27 Score=30.39 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=28.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDL 35 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 35 (258)
|||++||-+.=...+|..|.+...++.+|||-.|.
T Consensus 11 ~kIVvigGGtGl~~ll~gLk~~~~~iTaIVtvaDD 45 (341)
T 2p0y_A 11 PKIVVIGGGTGLPVVLNGLRKQAVDITAVVTVADD 45 (341)
T ss_dssp CEEEEECCGGGHHHHHHHHHHSSSEEEEECC----
T ss_pred CeEEEECCcccHHHHHHHHHhCCCCeEEEEECCcC
Confidence 68999999988888999999888899999997665
No 419
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=39.93 E-value=29 Score=29.74 Aligned_cols=32 Identities=13% Similarity=0.038 Sum_probs=27.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKP 33 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~p 33 (258)
||+++|++..+....+++.+.|++++.+-..+
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~ 32 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPSP 32 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEESCT
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 68999999999999999988899887665443
No 420
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=39.91 E-value=27 Score=30.24 Aligned_cols=32 Identities=6% Similarity=0.188 Sum_probs=26.3
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC-CcEEEEEcC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE-HNIVLILTK 32 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~-~~i~~Vvt~ 32 (258)
|||+++| |+..|..+++.|.+.. .++++|...
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~ 38 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR 38 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence 5899999 8999999999998765 477777653
No 421
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=39.75 E-value=23 Score=29.06 Aligned_cols=29 Identities=17% Similarity=0.247 Sum_probs=24.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|||++.|. +-.|..+.+.|+ .|++++++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~ 30 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALD 30 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEec
Confidence 89999986 678999999999 788887654
No 422
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=39.74 E-value=64 Score=27.03 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
++++++|.+..|..+...|.+.|..-+.|+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~n 172 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMAN 172 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4799999999999999999999874445554
No 423
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=39.65 E-value=97 Score=26.13 Aligned_cols=56 Identities=9% Similarity=0.129 Sum_probs=38.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
++|+|+|.+..|..+.+.|...|+++.+.=..+++.. .....+.+++.+..+=++.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----~~~~~l~ell~~aDvV~l~ 200 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----YPFLSLEELLKEADVVSLH 200 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----SCBCCHHHHHHHCSEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----cccCCHHHHHhhCCEEEEe
Confidence 5899999999999999999998888753322222111 2234567777777765554
No 424
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=39.52 E-value=90 Score=26.51 Aligned_cols=49 Identities=4% Similarity=-0.054 Sum_probs=33.7
Q ss_pred eEEEEcCCHHHHHH-HHHH-HhCCCc-EEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEE
Q psy5230 2 KIIFAGTSISAAAI-LDTL-YNSEHN-IVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKII 60 (258)
Q Consensus 2 rI~f~Gs~~fa~~~-L~~L-~~~~~~-i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~ 60 (258)
+|+++|.+..+..+ ++.+ ...|.+ ++++...++. .+=.++|++.|....
T Consensus 175 ~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~----------~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 175 SAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRP----------DPTIDIIEELDATYV 226 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSS----------CHHHHHHHHTTCEEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCccc----------HHHHHHHHHcCCccc
Confidence 68999998899988 7766 556776 7766553320 011578889998655
No 425
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=39.49 E-value=58 Score=26.46 Aligned_cols=46 Identities=24% Similarity=0.273 Sum_probs=34.4
Q ss_pred EEEEcCCHHHHHHHHHHHhC----CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 3 IIFAGTSISAAAILDTLYNS----EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 3 I~f~Gs~~fa~~~L~~L~~~----~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
++|+|+++-.....+.|.+. +.++. +||.. ..+.+.+.++|||++.
T Consensus 23 ~IglgsGST~~~~~~~L~~~~~~~~l~it-vVtnS------------~~~a~~l~~~gi~v~~ 72 (226)
T 2pjm_A 23 VIGLGTGSTAALFIRELGNRIREEELTVF-GIPTS------------FEAKMLAMQYEIPLVT 72 (226)
T ss_dssp EEEECCSHHHHHHHHHHHHHHHHHTCCCE-EEESS------------HHHHHHHHHTTCCBCC
T ss_pred EEEECCCHHHHHHHHHHHhhhhccCCcEE-EEeCc------------HHHHHHHHhcCCeEEe
Confidence 78999999888888888653 24554 56642 2467889999999874
No 426
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=39.40 E-value=41 Score=29.12 Aligned_cols=44 Identities=9% Similarity=0.045 Sum_probs=31.4
Q ss_pred eEEEE--cCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFA--GTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~--Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|+++ |++..+..+++.+...|.+++++...++ =.+++++.|..
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~-------------~~~~~~~lGa~ 218 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQE-------------QADLLKAQGAV 218 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHH-------------HHHHHHHTTCS
T ss_pred EEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH-------------HHHHHHhCCCc
Confidence 46777 7888888888877777888777654322 25678888875
No 427
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=39.23 E-value=85 Score=21.03 Aligned_cols=30 Identities=3% Similarity=0.084 Sum_probs=19.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-CCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYN-SEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~-~~~~i~~Vv 30 (258)
|||+++..+......++.+++ .|++++..+
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~~vv~~~ 33 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEA 33 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhhcCcEEEEEE
Confidence 578888887777777766665 356554333
No 428
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=39.08 E-value=29 Score=29.47 Aligned_cols=29 Identities=21% Similarity=0.170 Sum_probs=24.1
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCC--CcEEEE
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSE--HNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~--~~i~~V 29 (258)
|||+++|. +..+.++...|.+.+ ++++.+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~ 32 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLY 32 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEE
Confidence 89999997 999999998888877 455544
No 429
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=39.02 E-value=54 Score=27.71 Aligned_cols=44 Identities=2% Similarity=-0.013 Sum_probs=30.7
Q ss_pred eEEEEcCC-HHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGTS-ISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs~-~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|++.|.. ..+..+.+.+...|.+++++...+++ .+++.+.|..
T Consensus 147 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-------------~~~~~~lga~ 191 (340)
T 3gms_A 147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKH-------------TEELLRLGAA 191 (340)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTT-------------HHHHHHHTCS
T ss_pred EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH-------------HHHHHhCCCc
Confidence 57888876 78888888777778887766544321 4667777765
No 430
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=39.00 E-value=1.3e+02 Score=23.97 Aligned_cols=83 Identities=6% Similarity=0.027 Sum_probs=45.4
Q ss_pred EEcCCH--HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc----cCCCCCCcccccchHHH
Q psy5230 5 FAGTSI--SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ----PISLKLNGKYHKIANET 78 (258)
Q Consensus 5 f~Gs~~--fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~----~~~~~~~~~~~~~~~~~ 78 (258)
+++++. .+....+.|++.||.-+++++.+..... ...+..-..+.+.++|+++.. ....... .....+
T Consensus 110 ~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~--~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~ 183 (292)
T 3k4h_A 110 YVDNDNYTAAREVAEYLISLGHKQIAFIGGGSDLLV--TRDRLAGMSDALKLADIVLPKEYILHFDFSRE----SGQQAV 183 (292)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCCCEEEEESCTTBHH--HHHHHHHHHHHHHHTTCCCCGGGEEECCSSHH----HHHHHH
T ss_pred EEEECcHHHHHHHHHHHHHCCCceEEEEeCcccchh--HHHHHHHHHHHHHHcCCCCChheEEecCCCHH----HHHHHH
Confidence 455554 4567788999999887788875432110 011223467778889987521 1111111 000133
Q ss_pred HHHHhcC-CCcEEEEE
Q psy5230 79 HKLLNKI-EFDIMIVM 93 (258)
Q Consensus 79 ~~~l~~~-~~Dl~vv~ 93 (258)
.++|+.. .+|.+++.
T Consensus 184 ~~~l~~~~~~~ai~~~ 199 (292)
T 3k4h_A 184 EELMGLQQPPTAIMAT 199 (292)
T ss_dssp HHHHTSSSCCSEEEES
T ss_pred HHHHcCCCCCcEEEEc
Confidence 4455543 67888877
No 431
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=38.92 E-value=97 Score=21.58 Aligned_cols=31 Identities=29% Similarity=0.296 Sum_probs=21.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS--EHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~--~~~i~~Vvt 31 (258)
|||+++..+......|..+++. +++++..++
T Consensus 10 ~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~ 42 (143)
T 2qv0_A 10 MKVIIVEDEFLAQQELSWLINTHSQMEIVGSFD 42 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHSCCEEEEEES
T ss_pred eEEEEEcCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence 5788888888877777776654 455544443
No 432
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=38.91 E-value=1.2e+02 Score=26.00 Aligned_cols=67 Identities=10% Similarity=0.160 Sum_probs=43.4
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE-EccCCCCCCcccccchHHHH
Q psy5230 2 KIIFAG-TSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI-IQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~~~~~~~~~~ 79 (258)
+|++.| ++..+..+.+.+...|.+++++. .++ =.+++++.|... +.+. +. ++.
T Consensus 186 ~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~-------------~~~~~~~lGa~~v~~~~---~~--------~~~ 240 (375)
T 2vn8_A 186 RVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQD-------------ASELVRKLGADDVIDYK---SG--------SVE 240 (375)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGG-------------GHHHHHHTTCSEEEETT---SS--------CHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChH-------------HHHHHHHcCCCEEEECC---ch--------HHH
Confidence 688999 78999999888888888776554 221 146778888753 3332 22 344
Q ss_pred HHHhc-CCCcEEEEE
Q psy5230 80 KLLNK-IEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~-~~~Dl~vv~ 93 (258)
+.+.+ ..+|++|-+
T Consensus 241 ~~~~~~~g~D~vid~ 255 (375)
T 2vn8_A 241 EQLKSLKPFDFILDN 255 (375)
T ss_dssp HHHHTSCCBSEEEES
T ss_pred HHHhhcCCCCEEEEC
Confidence 44444 367887754
No 433
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=38.90 E-value=49 Score=28.37 Aligned_cols=44 Identities=11% Similarity=-0.059 Sum_probs=30.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|++.|.+..+..+.+.+...|. .++++...+. =.++|++.|..
T Consensus 193 ~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~-------------~~~~~~~lGa~ 237 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKD-------------KFARAKEFGAT 237 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGG-------------GHHHHHHHTCS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH-------------HHHHHHHcCCc
Confidence 58889998888888877776676 5655433322 14677788875
No 434
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=38.80 E-value=57 Score=27.43 Aligned_cols=63 Identities=11% Similarity=0.142 Sum_probs=0.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
+|++++|- +..+...++.|.+.+++++.-|.+..... +-.|+|+|. .+-
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~---------------~i~G~~vy~---------------sl~ 63 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQ---------------NVHGVPVFD---------------TVK 63 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTC---------------EETTEEEES---------------SHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCc---------------eECCEeeeC---------------CHH
Q ss_pred HHHhcCCCcEEEEE
Q psy5230 80 KLLNKIEFDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~~Dl~vv~ 93 (258)
+...+..+|+.|++
T Consensus 64 el~~~~~~Dv~ii~ 77 (294)
T 2yv1_A 64 EAVKETDANASVIF 77 (294)
T ss_dssp HHHHHHCCCEEEEC
T ss_pred HHhhcCCCCEEEEc
No 435
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=38.77 E-value=20 Score=30.96 Aligned_cols=31 Identities=19% Similarity=0.409 Sum_probs=24.9
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC---CcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE---HNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~---~~i~~Vvt 31 (258)
|||+++| |+..|..+++.|.+++ .+++++.+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s 41 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS 41 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 6899999 8999999999998664 45665554
No 436
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=38.61 E-value=60 Score=29.20 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=39.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
|++++|.+..++++-..|.+.|.++ .++...++....-.......+.+..+++||.++.-
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~g~~V-tlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~ 237 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRLGIDS-YIFARGNRILRKFDESVINVLENDMKKNNINIVTF 237 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEE-EEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred eEEEECChHHHHHHHHHHHHcCCeE-EEEecCCccCcccchhhHHHHHHHHHhCCCEEEEC
Confidence 6899999999999999999888776 45554333321100001123566778899998753
No 437
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=38.50 E-value=46 Score=27.89 Aligned_cols=31 Identities=16% Similarity=0.382 Sum_probs=26.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|+|++.|. +-.|..+.+.|++.|++|+++.-
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 68999986 67899999999999998876653
No 438
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=38.49 E-value=78 Score=26.57 Aligned_cols=63 Identities=14% Similarity=0.285 Sum_probs=0.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHH
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETH 79 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~ 79 (258)
+|++++|- +..+...++.|.+.+++++.-|. |.+. +.+. +|+|+|. .+-
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~Vn-P~~~---g~~i-----------~G~~vy~---------------sl~ 63 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGVT-PGKG---GSEV-----------HGVPVYD---------------SVK 63 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCT---TCEE-----------TTEEEES---------------SHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeC-CCCC---CceE-----------CCEeeeC---------------CHH
Q ss_pred HHHhcCC-CcEEEEE
Q psy5230 80 KLLNKIE-FDIMIVM 93 (258)
Q Consensus 80 ~~l~~~~-~Dl~vv~ 93 (258)
+...+.. +|+.|++
T Consensus 64 el~~~~~~~DvaIi~ 78 (297)
T 2yv2_A 64 EALAEHPEINTSIVF 78 (297)
T ss_dssp HHHHHCTTCCEEEEC
T ss_pred HHhhcCCCCCEEEEe
No 439
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=38.41 E-value=76 Score=27.97 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=42.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPIS 64 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~ 64 (258)
|++++|.+..++++-..|.+.|.++. ++...++....-.......+.+..+++||.++.-.+
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vt-lv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~ 210 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPT-LIHRSDKINKLMDADMNQPILDELDKREIPYRLNEE 210 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEE-EEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCC
T ss_pred EEEEECCccchhhhHHHHHhcCCcce-eeeeeccccccccchhHHHHHHHhhccceEEEeccE
Confidence 79999999999999999999887764 444333322111112234577888899999876443
No 440
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=38.38 E-value=50 Score=28.78 Aligned_cols=45 Identities=11% Similarity=0.113 Sum_probs=31.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
+|+++|.+..+..+++.+...|. .++++...+. =.++|++.|...
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-------------~~~~~~~lGa~~ 261 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHAGASKVILSEPSEV-------------RRNLAKELGADH 261 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHH-------------HHHHHHHHTCSE
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-------------HHHHHHHcCCCE
Confidence 58889998899988888877787 5655433221 256888888753
No 441
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=38.31 E-value=1.2e+02 Score=25.33 Aligned_cols=87 Identities=10% Similarity=0.010 Sum_probs=56.7
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHHHHhcCCCcEEEEE-
Q psy5230 15 ILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVM- 93 (258)
Q Consensus 15 ~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dl~vv~- 93 (258)
.-+...+.|-.-+.|+|-+....| ....+.+....-++|++.-+-+.++ .-+...+...+|.++..
T Consensus 84 ~A~~y~~~GA~~IsVltd~~~f~G-----s~~~L~~ir~~v~lPVl~Kdfi~d~--------~qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 84 LAKAYEEGGAACLSVLTDTPSFQG-----APEFLTAARQACSLPALRKDFLFDP--------YQVYEARSWGADCILIIM 150 (272)
T ss_dssp HHHHHHHTTCSEEEEECCSTTTCC-----CHHHHHHHHHTSSSCEEEESCCCST--------HHHHHHHHTTCSEEEEET
T ss_pred HHHHHHHCCCCEEEEeccccccCC-----CHHHHHHHHHhcCCCEEECCccCCH--------HHHHHHHHcCCCEEEEcc
Confidence 344555567777889997654443 2345677777789999865545555 45566788999988776
Q ss_pred eeCCCCCHHHHHHHHHHHHHH
Q psy5230 94 GILPEDTSLTLQNKLEKLSKI 114 (258)
Q Consensus 94 ~I~~~dt~~~L~~kl~~~g~~ 114 (258)
..-++++..+|.+....+|.+
T Consensus 151 a~L~~~~l~~l~~~a~~lGl~ 171 (272)
T 3tsm_A 151 ASVDDDLAKELEDTAFALGMD 171 (272)
T ss_dssp TTSCHHHHHHHHHHHHHTTCE
T ss_pred cccCHHHHHHHHHHHHHcCCe
Confidence 343445566666666666544
No 442
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=38.28 E-value=43 Score=28.94 Aligned_cols=58 Identities=14% Similarity=0.265 Sum_probs=41.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCc--------------c----CCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMK--------------L----NFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~--------------~----~~~~v~~~A~~~gIpv 59 (258)
|+|+++|.+-.++.+-..|.++|++| .|+=.-+...||... . ...++.++..+.|+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V-~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 76 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEV-EVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASV 76 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEE-EEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCce-EEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCc
Confidence 89999999999999999999998776 455554454444211 1 1235788888888753
No 443
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=38.23 E-value=29 Score=29.03 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=24.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~ 27 (258)
|||+++|.+.......+.|.+.|+++.
T Consensus 8 mki~v~~~~~~~~~~~~~L~~~g~~v~ 34 (300)
T 2rir_A 8 LKIAVIGGDARQLEIIRKLTEQQADIY 34 (300)
T ss_dssp CEEEEESBCHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEE
Confidence 799999999999999999999888874
No 444
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=38.21 E-value=29 Score=29.77 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=23.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC-cE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH-NI 26 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~-~i 26 (258)
|||+++|.+.++..+...|...++ ++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V 36 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADV 36 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeE
Confidence 799999999999999999988887 74
No 445
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=38.20 E-value=44 Score=27.38 Aligned_cols=57 Identities=14% Similarity=0.285 Sum_probs=39.3
Q ss_pred EcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCC-CCCCccCCcHHHHHHHHCCCcEEccCCC
Q psy5230 6 AGTSISAAAILDTLYNSEHNIVLILTKPDLHS-GRGMKLNFSPVKKYALKHSIKIIQPISL 65 (258)
Q Consensus 6 ~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~-gr~~~~~~~~v~~~A~~~gIpv~~~~~~ 65 (258)
+-|+.-...+.+.|.+.|.++++|++--|+.. |++ ..+.++++.++.|+|++.--++
T Consensus 152 itTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~---~l~a~~~~~~~~Gv~v~SL~~~ 209 (238)
T 3n2l_A 152 ITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKG---ELSAIQEVERDFGCAVISIVSL 209 (238)
T ss_dssp CSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSS---SSBHHHHHHHHHCCEEEEEEEH
T ss_pred ecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccc---hhhHHHHHHHHcCCCEEEEEEH
Confidence 35666777888888888988877776555543 232 2356778878889999765444
No 446
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=38.06 E-value=53 Score=27.87 Aligned_cols=45 Identities=7% Similarity=0.189 Sum_probs=32.4
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 2 KIIFAGT-SISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
+|+++|. +..+..+.+.+...|.+++++...+++ .+++++.|...
T Consensus 162 ~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~-------------~~~~~~~ga~~ 207 (342)
T 4eye_A 162 TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAA-------------TEFVKSVGADI 207 (342)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGG-------------HHHHHHHTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-------------HHHHHhcCCcE
Confidence 5788886 889999888888888887666543321 46777777654
No 447
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=38.02 E-value=62 Score=25.60 Aligned_cols=29 Identities=10% Similarity=0.095 Sum_probs=22.5
Q ss_pred eEEEEcC-CHHHHHHHHHHHhCCCcEEEEE
Q psy5230 2 KIIFAGT-SISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 2 rI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
+|++.|. ...|..+.+.|.+.|++++.+.
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFARAGAKVGLHG 38 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEC
Confidence 5666654 5689999999999999876554
No 448
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=37.89 E-value=29 Score=30.17 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=27.0
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC-CcEEEEEcC
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE-HNIVLILTK 32 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~-~~i~~Vvt~ 32 (258)
|||++.| ++-.|..+++.|.+.. .+++++...
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~ 50 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD 50 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 5899999 9999999999998865 578777664
No 449
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=37.83 E-value=35 Score=30.72 Aligned_cols=29 Identities=10% Similarity=0.074 Sum_probs=25.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|||+|+|.+.+|..+-..|.++|++++.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~ 66 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAV 66 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEE
Confidence 58999999999999999999999987544
No 450
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=37.82 E-value=63 Score=28.68 Aligned_cols=59 Identities=10% Similarity=0.108 Sum_probs=40.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCc-cCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMK-LNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~-~~~~~v~~~A~~~gIpv~~ 61 (258)
+|+++|.+..++++-..|.+.|.++ .++...+....|... .....+.+..+++||.++.
T Consensus 180 ~vvViGgG~~g~E~A~~l~~~g~~V-tlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~ 239 (474)
T 1zmd_A 180 KMVVIGAGVIGVELGSVWQRLGADV-TAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKL 239 (474)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEE-EEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEEC
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEE-EEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEe
Confidence 7899999999999999999988776 455554443322110 0112356677889999864
No 451
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=37.58 E-value=53 Score=28.87 Aligned_cols=60 Identities=8% Similarity=0.055 Sum_probs=40.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+|+++|.+..++++-..|.+.|.++ .++...+.+..|.. ......+.+..+++|+.++.-
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~G~~V-tlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~ 211 (431)
T 1q1r_A 151 RLVVIGGGYIGLEVAATAIKANMHV-TLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTG 211 (431)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEE-EEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEE-EEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeC
Confidence 6899999999999999999988776 45665444433211 001123566778889998643
No 452
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=37.49 E-value=61 Score=24.03 Aligned_cols=45 Identities=11% Similarity=0.136 Sum_probs=28.6
Q ss_pred HHHHHHCCCcEEccCCCCCCcccccchHHHHHHHhcCCCcEEEEEe
Q psy5230 49 KKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVMG 94 (258)
Q Consensus 49 ~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dl~vv~~ 94 (258)
.++-+++|||+....+....+.. .-.+.+.+.+++.+.|++|-.+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~-~~~~~i~d~i~~g~i~lVInt~ 104 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQN-PSLSSIRKLIRDGSIDLVINLP 104 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC------CBCHHHHHHTTSCCEEEECC
T ss_pred HHHHHHcCCeEEEEEeccCCCcc-cccccHHHHHHCCCceEEEECC
Confidence 45667899998766554321000 0001688999999999998764
No 453
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=37.37 E-value=55 Score=28.91 Aligned_cols=60 Identities=10% Similarity=0.008 Sum_probs=39.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+|+++|.+..++++-..|.+.|.++ .|+...+....+........+.+..+++|+.++.-
T Consensus 169 ~vvIiGgG~~g~e~A~~l~~~g~~V-~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 228 (455)
T 2yqu_A 169 RLIVVGGGVIGLELGVVWHRLGAEV-IVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTG 228 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEE-EEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEE-EEEecCCccccccCHHHHHHHHHHHHHCCCEEEEC
Confidence 7899999999999999999888875 45554333221100111123566777889998753
No 454
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=37.27 E-value=32 Score=28.86 Aligned_cols=31 Identities=16% Similarity=0.404 Sum_probs=25.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhC--CCcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNS--EHNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~--~~~i~~Vvt 31 (258)
|+|++.| ++-.|..+.+.|++. |++|+++.-
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 4799998 677899999999998 788876643
No 455
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=37.22 E-value=51 Score=29.45 Aligned_cols=59 Identities=10% Similarity=0.051 Sum_probs=39.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
+|+++|.+..++++...|.+.|.++. ++...+....+-.......+.+..+++||.++.
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~g~~Vt-lv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~ 258 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARLGAKVT-VVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKL 258 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEE-EECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEE-EEeccccccccCCHHHHHHHHHHHHhCCCEEEE
Confidence 68999999999999999988887764 555433322110011112356677889999864
No 456
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=37.11 E-value=29 Score=25.78 Aligned_cols=25 Identities=12% Similarity=0.289 Sum_probs=22.1
Q ss_pred eEEEEcC----CHHHHHHHHHHHhCCCcE
Q psy5230 2 KIIFAGT----SISAAAILDTLYNSEHNI 26 (258)
Q Consensus 2 rI~f~Gs----~~fa~~~L~~L~~~~~~i 26 (258)
+|+|+|. +.++...++.|.+.|+++
T Consensus 15 ~IavIGas~~~g~~G~~~~~~L~~~G~~v 43 (145)
T 2duw_A 15 TIALVGASDKPDRPSYRVMKYLLDQGYHV 43 (145)
T ss_dssp CEEEESCCSCTTSHHHHHHHHHHHHTCCE
T ss_pred EEEEECcCCCCCChHHHHHHHHHHCCCEE
Confidence 6999998 569999999999999984
No 457
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=36.73 E-value=55 Score=29.06 Aligned_cols=59 Identities=14% Similarity=0.081 Sum_probs=39.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
+++++|....++++...|.+.|.++. ++...+.....-.......+.+..+++||.++.
T Consensus 182 ~v~ViGgG~~g~e~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~ 240 (476)
T 3lad_A 182 KLGVIGAGVIGLELGSVWARLGAEVT-VLEAMDKFLPAVDEQVAKEAQKILTKQGLKILL 240 (476)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHcCCcEE-EEecCCCcCcccCHHHHHHHHHHHHhCCCEEEE
Confidence 68999999999999999999888775 555433322110000112356667889999864
No 458
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=36.70 E-value=67 Score=28.51 Aligned_cols=59 Identities=8% Similarity=0.059 Sum_probs=39.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+|+++|.+..++++-..|.+.|.++ .++...+... +.. ......+.+..+++||.++.-
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~V-tlv~~~~~~l-~~~~~~~~~~l~~~l~~~gv~i~~~ 227 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEV-TVVALEDRLL-FQFDPLLSATLAENMHAQGIETHLE 227 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEE-EEECSSSSSS-TTSCHHHHHHHHHHHHHTTCEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEE-EEEEcCCccc-cccCHHHHHHHHHHHHHCCCEEEeC
Confidence 6899999999999999999988776 4555433322 111 001123567778899998753
No 459
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=36.68 E-value=40 Score=28.84 Aligned_cols=29 Identities=17% Similarity=0.060 Sum_probs=25.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~V 29 (258)
|+|+|+|.+.+|..+.+.|...|++++++
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~ 179 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYY 179 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEE
Confidence 68999999999999999999989887543
No 460
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=36.50 E-value=75 Score=27.56 Aligned_cols=59 Identities=10% Similarity=0.003 Sum_probs=41.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~ 61 (258)
+++++|....++++...|.+.+.++. ++...+....|.. ......+.+..+++|+.++.
T Consensus 154 ~vvViGgG~~g~e~A~~l~~~g~~Vt-vv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 213 (415)
T 3lxd_A 154 NAVVIGGGYIGLEAAAVLTKFGVNVT-LLEALPRVLARVAGEALSEFYQAEHRAHGVDLRT 213 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEE-EEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEE
Confidence 68999999999999999999887765 5555444443321 11112356778899999874
No 461
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=36.48 E-value=24 Score=30.16 Aligned_cols=29 Identities=10% Similarity=0.079 Sum_probs=24.4
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC--CcEEEE
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE--HNIVLI 29 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~--~~i~~V 29 (258)
|||+++| ++..+..+...|.+.+ ++++.+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 7999999 8999999998898877 566654
No 462
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=36.42 E-value=1.6e+02 Score=26.05 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=38.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
||+++|.+..|+.+...+...|.+-+.++.+.+... .. ....-.+.+++.|+.++.
T Consensus 266 ~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~---~p-~~~~e~~~~~~~Gv~~~~ 321 (456)
T 2vdc_G 266 HVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKN---MP-GSQREVAHAEEEGVEFIW 321 (456)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTT---CS-SCHHHHHHHHHTTCEEEC
T ss_pred EEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccC---CC-CCHHHHHHHHHCCCEEEe
Confidence 799999999999999999888876566776533211 00 111123568889998864
No 463
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=36.34 E-value=56 Score=28.90 Aligned_cols=60 Identities=17% Similarity=0.053 Sum_probs=39.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
|++++|.+..++++-..|.+.|.++. ++...++...+-.......+.+..+++||.++.-
T Consensus 173 ~vvViGgG~~g~E~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 232 (464)
T 2a8x_A 173 SIIIAGAGAIGMEFGYVLKNYGVDVT-IVEFLPRALPNEDADVSKEIEKQFKKLGVTILTA 232 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEE-EEEcCCccccccCHHHHHHHHHHHHHcCCEEEeC
Confidence 68999999999999999999887764 5554333321100001123566677889988653
No 464
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=36.07 E-value=55 Score=25.78 Aligned_cols=31 Identities=26% Similarity=0.255 Sum_probs=24.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
++|++.|. ...|..+.+.|++.|++++++.-
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC
Confidence 15788875 57899999999999998876643
No 465
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=36.02 E-value=43 Score=34.36 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=30.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDL 35 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 35 (258)
||+++|.++.++.+++++.+.|+++++|.+.+|.
T Consensus 33 kILI~grGeia~~iiraar~lGi~vVaV~s~~d~ 66 (1236)
T 3va7_A 33 TVLIANRGEIAVRIMKTLKRMGIKSVAVYSDPDK 66 (1236)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGG
T ss_pred EEEEEcCCHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 7999999999999999999999999999876653
No 466
>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens}
Probab=36.00 E-value=35 Score=21.18 Aligned_cols=26 Identities=8% Similarity=0.029 Sum_probs=21.6
Q ss_pred CCCCCcEEEEEeeCCcEEEEecCcEE
Q psy5230 201 STKKPGTILNVNFHNGILVVCGKNVI 226 (258)
Q Consensus 201 ~~~~pG~i~~~~~~~~l~V~c~dg~l 226 (258)
+..+.|++.++..+..++|+..+||=
T Consensus 17 ~~~~eGtL~yv~d~~eLyiRVr~Gwr 42 (54)
T 3n3f_A 17 HLVIEGTFIYLRDSTEFFIRVRDGWK 42 (54)
T ss_dssp GGSCTTEEEEETTTTEEEEEETTEEE
T ss_pred ccCCCeeEEEEEecceEEEEEcCcee
Confidence 45678999988757889999999973
No 467
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=35.90 E-value=96 Score=22.25 Aligned_cols=31 Identities=19% Similarity=0.191 Sum_probs=18.8
Q ss_pred CeEEEEcCC-----H---HHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTS-----I---SAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~-----~---fa~~~L~~L~~~~~~i~~Vvt 31 (258)
||++|+=+. + -+.....++.+.|+++..|+-
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff 39 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFF 39 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEE
Confidence 777775333 1 334555667778898845554
No 468
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=35.82 E-value=90 Score=25.60 Aligned_cols=53 Identities=15% Similarity=0.061 Sum_probs=37.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
+|+++|.+..++++...|.+.+.++. ++.+.+... ....+.+.+.+.|+.++.
T Consensus 157 ~v~viG~G~~g~e~a~~l~~~g~~V~-~i~~~~~~~------~~~~l~~~l~~~gv~i~~ 209 (319)
T 3cty_A 157 RVVTIGGGNSGAIAAISMSEYVKNVT-IIEYMPKYM------CENAYVQEIKKRNIPYIM 209 (319)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEE-EECSSSSCC------SCHHHHHHHHHTTCCEEC
T ss_pred eEEEECCCHHHHHHHHHHHhhCCcEE-EEEcCCccC------CCHHHHHHHhcCCcEEEc
Confidence 68999999999999999988776654 554332221 123467777799999864
No 469
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=35.74 E-value=1e+02 Score=27.51 Aligned_cols=83 Identities=13% Similarity=0.123 Sum_probs=50.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCC---C---CccCC---cHHHHHHHHCCCcEEccCCCCCCccc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGR---G---MKLNF---SPVKKYALKHSIKIIQPISLKLNGKY 71 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr---~---~~~~~---~~v~~~A~~~gIpv~~~~~~~~~~~~ 71 (258)
++|+++|.+..++.+...|.+.|+++ .|+...+...|. + .++.. ....++.++.|+.++.-......
T Consensus 123 ~~V~IIGgGpAGl~aA~~L~~~G~~V-~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~~--- 198 (456)
T 2vdc_G 123 LSVGVIGAGPAGLAAAEELRAKGYEV-HVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRD--- 198 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCE-EEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTTT---
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeE-EEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEeccE---
Confidence 47999999999999999999989885 566654333221 1 01110 12345677889988653333211
Q ss_pred ccchHHHHHHHhcCCCcEEEEE
Q psy5230 72 HKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 72 ~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
-..+.+. ..+|.+|++
T Consensus 199 -----v~~~~~~-~~~d~vvlA 214 (456)
T 2vdc_G 199 -----ASLPELR-RKHVAVLVA 214 (456)
T ss_dssp -----BCHHHHH-SSCSEEEEC
T ss_pred -----EEhhHhH-hhCCEEEEe
Confidence 0112232 579998887
No 470
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=35.71 E-value=29 Score=29.93 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=30.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDL 35 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 35 (258)
|||++||-+.=...+|..|.+...++.+|||-.|.
T Consensus 5 ~kiv~lgGGtGl~~ll~gL~~~~~~iT~IVtv~Dd 39 (323)
T 2o2z_A 5 KNVIVFGGGTGLSVLLRGLKTFPVSITAIVTVADD 39 (323)
T ss_dssp EEEEEEECSHHHHHHHHHHTTSSEEEEEEECCCCC
T ss_pred CeEEEECCcccHHHHHHHHHhcCCCeEEEEECCcC
Confidence 68999999988888999998777889999998765
No 471
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=35.65 E-value=75 Score=27.29 Aligned_cols=44 Identities=11% Similarity=-0.018 Sum_probs=31.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|++.|.+..+..+++.+...|.+++++...+++ .++|++.|..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~-------------~~~a~~lGa~ 240 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAK-------------REAAKALGAD 240 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGG-------------HHHHHHHTCS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------------HHHHHHcCCc
Confidence 6888999888988888777778876665543321 4667777864
No 472
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=35.35 E-value=48 Score=27.98 Aligned_cols=31 Identities=19% Similarity=0.347 Sum_probs=24.9
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhCC-CcEEEEEc
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNSE-HNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~~-~~i~~Vvt 31 (258)
|+|++.|. +-.|..+.+.|++.| ++++++.-
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 68999986 578999999999999 88876643
No 473
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=35.30 E-value=1.5e+02 Score=22.74 Aligned_cols=23 Identities=13% Similarity=-0.008 Sum_probs=15.4
Q ss_pred cccchHHHHHHHhcCCCcEEEEE
Q psy5230 71 YHKIANETHKLLNKIEFDIMIVM 93 (258)
Q Consensus 71 ~~~~~~~~~~~l~~~~~Dl~vv~ 93 (258)
||..+..+-+.+.+-..|..|++
T Consensus 46 Ypd~a~~va~~V~~g~~d~GIli 68 (162)
T 2vvp_A 46 YPAFCIAAATRTVADPGSLGIVL 68 (162)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEE
T ss_pred hHHHHHHHHHHHHcCCCceEEEE
Confidence 44334455566777788998888
No 474
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=35.26 E-value=50 Score=28.18 Aligned_cols=30 Identities=17% Similarity=0.000 Sum_probs=26.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLIL 30 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vv 30 (258)
|+|+|+|.+.+|..+.+.|...|++++++-
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d 185 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYT 185 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEC
Confidence 689999999999999999998898876443
No 475
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=35.26 E-value=44 Score=28.41 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=32.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEH-NIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIK 58 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~-~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIp 58 (258)
+|++.|.+..+..+.+.+...|. +++++...++ -.+++++.|..
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~-------------~~~~~~~~Ga~ 214 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDF-------------RRELAKKVGAD 214 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHH-------------HHHHHHHHTCS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-------------HHHHHHHhCCC
Confidence 58899998899999988888887 7765543221 24677788875
No 476
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=35.12 E-value=16 Score=30.58 Aligned_cols=34 Identities=9% Similarity=0.193 Sum_probs=28.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHhC-CCcEEEEEcCCC
Q psy5230 1 MKIIFAGT-SISAAAILDTLYNS-EHNIVLILTKPD 34 (258)
Q Consensus 1 mrI~f~Gs-~~fa~~~L~~L~~~-~~~i~~Vvt~pd 34 (258)
|||+++|. +.++..+.+.+.+. ++++++++..++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~ 41 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG 41 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence 79999996 89999999988754 688988887654
No 477
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=35.06 E-value=1.8e+02 Score=23.64 Aligned_cols=87 Identities=8% Similarity=0.019 Sum_probs=58.7
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHHHHhcCCCcEEEE
Q psy5230 13 AAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIV 92 (258)
Q Consensus 13 ~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dl~vv 92 (258)
....+...+.|-..+.|+|-+....| ....+...+...++|+...+-+.++ .-+.......+|.+++
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~f~G-----~~~~l~~i~~~v~lPvl~kdfI~d~--------~qi~~a~~~GAD~VlL 134 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHRFGG-----SLLDLKRVREAVDLPLLRKDFVVDP--------FMLEEARAFGASAALL 134 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSSCC-----CHHHHHHHHHHCCSCEEEESCCCSH--------HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEecchhhhcc-----CHHHHHHHHHhcCCCEEECCcCCCH--------HHHHHHHHcCCCEEEE
Confidence 44556666778888899987655444 2345778888899999766555554 3456677889999887
Q ss_pred E--eeCCCCCHHHHHHHHHHHHHH
Q psy5230 93 M--GILPEDTSLTLQNKLEKLSKI 114 (258)
Q Consensus 93 ~--~I~~~dt~~~L~~kl~~~g~~ 114 (258)
. .++ ++..+|......+|.+
T Consensus 135 ~~~~l~--~~l~~l~~~a~~lGl~ 156 (254)
T 1vc4_A 135 IVALLG--ELTGAYLEEARRLGLE 156 (254)
T ss_dssp EHHHHG--GGHHHHHHHHHHHTCE
T ss_pred CccchH--HHHHHHHHHHHHCCCe
Confidence 7 333 6777777655555533
No 478
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=34.97 E-value=57 Score=27.65 Aligned_cols=45 Identities=7% Similarity=0.120 Sum_probs=31.0
Q ss_pred eEEEE-cCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 2 KIIFA-GTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 2 rI~f~-Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
+|++. |++..+..+.+.+...|.+++++...+. =.+++++.|...
T Consensus 153 ~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~-------------~~~~~~~lGa~~ 198 (346)
T 3fbg_A 153 TLLIINGAGGVGSIATQIAKAYGLRVITTASRNE-------------TIEWTKKMGADI 198 (346)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH-------------HHHHHHHHTCSE
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH-------------HHHHHHhcCCcE
Confidence 57788 6888998888888777887665543221 246777777653
No 479
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=34.95 E-value=99 Score=26.39 Aligned_cols=61 Identities=10% Similarity=0.075 Sum_probs=39.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
++|+|+|.+..|..+-+.|...|+++++.=..+....+-........+.+++.+..+=++.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~ 201 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSV 201 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEEC
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEe
Confidence 5899999999999999999998988765422221111100111234677777777765544
No 480
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=34.88 E-value=1.8e+02 Score=25.85 Aligned_cols=75 Identities=12% Similarity=0.105 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCCCC-CccCCcHH-HHHHHHCCCcEEccCCCCCCcccccchHHHHHHHhcCCCc
Q psy5230 11 SAAAILDTLYNSEHNIVLILTKPDLHSGRG-MKLNFSPV-KKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFD 88 (258)
Q Consensus 11 fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~-~~~~~~~v-~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~~l~~~~~D 88 (258)
-++|+++.|+++|-..+-+++|=.+|.|.. .+..-.|+ ..+.+-.|.||.-.+..-.+ +..+.+.++++-
T Consensus 41 aalpTIk~ll~~gak~Vil~SHlGRP~g~~~~~~SL~pva~~L~~lLg~~V~f~~d~~G~--------~~~~~v~~l~~G 112 (415)
T 1qpg_A 41 AALPTIKYVLEHHPRYVVLASHLGQPNGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGP--------EVEAAVKASAPG 112 (415)
T ss_dssp HHHHHHHHHHTTCCSEEEEECCCSCCCSSCCGGGCSHHHHHHHHHHHTSCCEEESCSSSH--------HHHHHHHTCCTT
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCCCCCCCCCccCHHHHHHHHHHHHCCCceeCCCcCCH--------HHHHHHhcCCCC
Confidence 578999999999988556778777776632 22333354 44566668888554444344 666677776664
Q ss_pred EEEEE
Q psy5230 89 IMIVM 93 (258)
Q Consensus 89 l~vv~ 93 (258)
=++..
T Consensus 113 ~VlLL 117 (415)
T 1qpg_A 113 SVILL 117 (415)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 44444
No 481
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=34.78 E-value=28 Score=29.30 Aligned_cols=83 Identities=8% Similarity=-0.039 Sum_probs=47.4
Q ss_pred EEcCCH--HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc-CCCCCCcccccchHHHHHH
Q psy5230 5 FAGTSI--SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP-ISLKLNGKYHKIANETHKL 81 (258)
Q Consensus 5 f~Gs~~--fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~-~~~~~~~~~~~~~~~~~~~ 81 (258)
++++++ .+....+.|++.||.-+++++.+.... .......-..+.+.++|++.... ........+ ..+.++
T Consensus 153 ~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~--~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~----~~~~~l 226 (333)
T 3jvd_A 153 RVLCDDEAGFFQLTESVLGGSGMNIAALVGEESLS--TTQERMRGISHAASIYGAEVTFHFGHYSVESGE----EMAQVV 226 (333)
T ss_dssp EEEECHHHHHHHHHHHHCCSSSCEEEEEESCTTSH--HHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHH----HHHHHH
T ss_pred EEEEChHHHHHHHHHHHHHCCCCeEEEEeCCCCCc--cHHHHHHHHHHHHHHCCCCEEEecCCCCHHHHH----HHHHHH
Confidence 344554 455777889999998888888653211 00112234677788999983322 222211001 134455
Q ss_pred HhcCCCcEEEEE
Q psy5230 82 LNKIEFDIMIVM 93 (258)
Q Consensus 82 l~~~~~Dl~vv~ 93 (258)
|+...||.+|+.
T Consensus 227 l~~~~~~ai~~~ 238 (333)
T 3jvd_A 227 FNNGLPDALIVA 238 (333)
T ss_dssp HHTCCCSEEEEC
T ss_pred hcCCCCcEEEEC
Confidence 665558988887
No 482
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=34.39 E-value=1.5e+02 Score=22.57 Aligned_cols=27 Identities=7% Similarity=0.074 Sum_probs=21.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS-EHNIV 27 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~-~~~i~ 27 (258)
|||+++..+......|..+++. |+++.
T Consensus 1 m~ilivdd~~~~~~~l~~~L~~~g~~v~ 28 (223)
T 2hqr_A 1 MRVLLIEKNSVLGGEIEKGLNVKGFMAD 28 (223)
T ss_dssp CCEEEECSCHHHHHHHHHHHGGGTCCEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHHCCcEEE
Confidence 8999999998888888887764 67664
No 483
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=34.31 E-value=98 Score=22.90 Aligned_cols=48 Identities=6% Similarity=0.041 Sum_probs=30.1
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEcc
Q psy5230 13 AAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 13 ~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~~ 62 (258)
-+-+-.++.+| +|-.||--|+ |.++.- ...-..+...|..+|||+++.
T Consensus 63 ~p~I~d~I~~g-eIdlVInt~~-pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 63 DQQMGARVAEG-RILAVIFFRD-PLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp HHHHHHHHHTT-CEEEEEEECC-TTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred cchHHHHHHCC-CccEEEEccC-cccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 34455556654 7766776665 222221 234457999999999999864
No 484
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=34.31 E-value=94 Score=25.55 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=24.2
Q ss_pred eEEEEc-CCHHHHHHHHHHHhCCCcEEEEEc
Q psy5230 2 KIIFAG-TSISAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 2 rI~f~G-s~~fa~~~L~~L~~~~~~i~~Vvt 31 (258)
+++++| ++..|..+...|.+.|+++ .++.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~G~~V-~i~~ 150 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGEGAEV-VLCG 150 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEE-EEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEE-EEEE
Confidence 688999 8999999999999999874 4444
No 485
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=34.26 E-value=38 Score=28.36 Aligned_cols=75 Identities=5% Similarity=-0.001 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCC-CCcccccchHHHHHHHhcCCCcE
Q psy5230 11 SAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLK-LNGKYHKIANETHKLLNKIEFDI 89 (258)
Q Consensus 11 fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~-~~~~~~~~~~~~~~~l~~~~~Dl 89 (258)
.+....+.|++.||.-++++. ++...|+. ....+++.++++|+++....... ...++. ..+..+++.+||.
T Consensus 126 ~~~~~~~~l~~~g~~~ia~i~-~~~~~~~~---~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~l~~~~~d~ 197 (358)
T 3hut_A 126 EGPNNAAWMIGDGFTSVAVIG-VTTDWGLS---SAQAFRKAFELRGGAVVVNEEVPPGNRRFD----DVIDEIEDEAPQA 197 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEE-ESSHHHHH---HHHHHHHHHHHTTCEEEEEEEECTTCCCCH----HHHHHHHHHCCSE
T ss_pred HHHHHHHHHHHcCCCEEEEEe-cCcHHHHH---HHHHHHHHHHHcCCEEEEEEecCCCCccHH----HHHHHHHhcCCCE
Confidence 556677888888998888887 44444332 22346778889999874321111 111111 5667777788998
Q ss_pred EEEE
Q psy5230 90 MIVM 93 (258)
Q Consensus 90 ~vv~ 93 (258)
++++
T Consensus 198 i~~~ 201 (358)
T 3hut_A 198 IYLA 201 (358)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8876
No 486
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=34.20 E-value=98 Score=26.38 Aligned_cols=61 Identities=7% Similarity=0.029 Sum_probs=39.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
++|+|+|.+..|..+-+.|...|+++++.=..+....+-........+.+++.+..+=++.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~ 198 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNA 198 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEc
Confidence 5799999999999999999998998865433222211111111234567777777765544
No 487
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=34.15 E-value=63 Score=29.74 Aligned_cols=47 Identities=15% Similarity=0.015 Sum_probs=33.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC------CCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcE
Q psy5230 1 MKIIFAGTSISAAAILDTLYNS------EHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKI 59 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~------~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv 59 (258)
+||+|+|.+..|......|.++ |++++.-. ..+. ...+.|++.|+.+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~-r~~s-----------ks~e~A~e~G~~v 107 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGL-RKGS-----------KSFDEARAAGFTE 107 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEE-CTTC-----------SCHHHHHHTTCCT
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEe-CCch-----------hhHHHHHHCCCEE
Confidence 5899999999999999999998 88653211 1111 1356788888754
No 488
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=34.05 E-value=34 Score=28.64 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=25.2
Q ss_pred CeEEEEc-CCHHHHHHHHHHHhCC-------CcEEEEEc
Q psy5230 1 MKIIFAG-TSISAAAILDTLYNSE-------HNIVLILT 31 (258)
Q Consensus 1 mrI~f~G-s~~fa~~~L~~L~~~~-------~~i~~Vvt 31 (258)
|+|++.| ++-.|..+.+.|++.| ++++++.-
T Consensus 15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r 53 (342)
T 2hrz_A 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV 53 (342)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence 6899998 6778999999999988 67765543
No 489
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=34.04 E-value=43 Score=27.50 Aligned_cols=31 Identities=23% Similarity=0.083 Sum_probs=23.9
Q ss_pred CeEEEEcCCH---------HHHHHHHHHHhCCCcEEEEEc
Q psy5230 1 MKIIFAGTSI---------SAAAILDTLYNSEHNIVLILT 31 (258)
Q Consensus 1 mrI~f~Gs~~---------fa~~~L~~L~~~~~~i~~Vvt 31 (258)
|||+++|.+. .+..+.++|.+.|++++.+-.
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~ 42 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDP 42 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEec
Confidence 6899998765 566788899898988765543
No 490
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=34.02 E-value=75 Score=27.47 Aligned_cols=59 Identities=8% Similarity=0.003 Sum_probs=40.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~ 61 (258)
+++++|.+..++++...|.+.+.++. ++...+....|.. ......+.+..+++|+.++.
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~g~~Vt-vv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~ 203 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAKGLEVD-VVELAPRVMARVVTPEISSYFHDRHSGAGIRMHY 203 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEE-EEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEE
Confidence 68999999999999999999887764 5554444443321 11112356777889999864
No 491
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=33.84 E-value=65 Score=28.45 Aligned_cols=60 Identities=3% Similarity=-0.064 Sum_probs=39.4
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+++++|.+..++++-..|.+.|.++. ++...+.....-.......+.+..+++|+.++.-
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 228 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGLGAKTH-LFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTN 228 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCEEE-EEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeC
Confidence 68999999999999999999887764 5554333221100001123566778889998753
No 492
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=33.84 E-value=88 Score=25.78 Aligned_cols=28 Identities=18% Similarity=0.194 Sum_probs=22.8
Q ss_pred eEEEEcCC---HHHHHHHHHHHhCCCcEEEE
Q psy5230 2 KIIFAGTS---ISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 2 rI~f~Gs~---~fa~~~L~~L~~~~~~i~~V 29 (258)
++++.|.. .++..+.+.|.+.|++++.+
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~ 62 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALT 62 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence 47788865 79999999999999887544
No 493
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=33.73 E-value=65 Score=28.71 Aligned_cols=60 Identities=7% Similarity=0.073 Sum_probs=39.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+++++|.+..++++...|.+.|.++. ++...++...+-.......+.+..+++||.++.-
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vt-lv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~ 246 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETH-LVIRGETVLRKFDECIQNTITDHYVKEGINVHKL 246 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEE-EECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceE-EEEeCCccccccCHHHHHHHHHHHHhCCeEEEeC
Confidence 68999999999999999999887764 4554333221100001123566777889998753
No 494
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=33.72 E-value=51 Score=25.27 Aligned_cols=79 Identities=14% Similarity=0.166 Sum_probs=42.9
Q ss_pred EEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEccCCCCCCcccccchHHHHHHHhcCCCcEEEEE---eeCCCCCHHH
Q psy5230 27 VLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQPISLKLNGKYHKIANETHKLLNKIEFDIMIVM---GILPEDTSLT 103 (258)
Q Consensus 27 ~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dl~vv~---~I~~~dt~~~ 103 (258)
++|++--|. .|+-......-+.++..+.|+.+....-+.|+. ..+...+.+++.+..+|++|+. ...++|-..+
T Consensus 13 v~Ii~tGdE-~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~--~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~t~e 89 (172)
T 1mkz_A 13 IAILTVSNR-RGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENR--YAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPE 89 (172)
T ss_dssp EEEEEECSS-CCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHHHHHHSSSCCEEEEESCCSSSTTCCHHH
T ss_pred EEEEEEeCC-CCcccCccHHHHHHHHHHCCCeEeEEEEeCCCH--HHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCCHHH
Confidence 567766555 443222222357888889999876544333321 0111122223333358999988 6666776666
Q ss_pred HHHHH
Q psy5230 104 LQNKL 108 (258)
Q Consensus 104 L~~kl 108 (258)
...++
T Consensus 90 a~~~~ 94 (172)
T 1mkz_A 90 ALLPL 94 (172)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 55544
No 495
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=33.72 E-value=38 Score=27.24 Aligned_cols=29 Identities=14% Similarity=0.145 Sum_probs=21.2
Q ss_pred Ce-EEEEc-CCHHHHHHHHHHHhCCCcEEEE
Q psy5230 1 MK-IIFAG-TSISAAAILDTLYNSEHNIVLI 29 (258)
Q Consensus 1 mr-I~f~G-s~~fa~~~L~~L~~~~~~i~~V 29 (258)
|| +++.| +...+..+.+.|.+.|++++.+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEEC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 66 44555 5568999999999999887543
No 496
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=33.65 E-value=77 Score=28.74 Aligned_cols=59 Identities=7% Similarity=0.009 Sum_probs=39.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQ 61 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~ 61 (258)
|++++|.+..++++...|.+.|.++. ++...+.....-.......+.+..++.|+.++.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~ 211 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTT-LLELADQVMTPVDREMAGFAHQAIRDQGVDLRL 211 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEE-EEEcCCccchhcCHHHHHHHHHHHHHCCCEEEe
Confidence 79999999999999999999888765 444333222110000112355677889999864
No 497
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=33.62 E-value=51 Score=29.22 Aligned_cols=60 Identities=8% Similarity=-0.019 Sum_probs=39.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCCccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGMKLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+|+++|.+..++++-..|.+.|.++. |+...+.....-.......+.+..+++||.++.-
T Consensus 173 ~vvViGgG~~g~e~A~~l~~~g~~Vt-lv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 232 (458)
T 1lvl_A 173 HLVVVGGGYIGLELGIAYRKLGAQVS-VVEARERILPTYDSELTAPVAESLKKLGIALHLG 232 (458)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEE-EECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETT
T ss_pred eEEEECcCHHHHHHHHHHHHCCCeEE-EEEcCCccccccCHHHHHHHHHHHHHCCCEEEEC
Confidence 78999999999999999988887764 5554333321100001123456677889998653
No 498
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=33.58 E-value=74 Score=27.23 Aligned_cols=60 Identities=5% Similarity=0.050 Sum_probs=40.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCCC-ccCCcHHHHHHHHCCCcEEcc
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTKPDLHSGRGM-KLNFSPVKKYALKHSIKIIQP 62 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~gr~~-~~~~~~v~~~A~~~gIpv~~~ 62 (258)
+++++|....++++-..|.+.|.++. |+...+....+-. ......+.+..+++|+.++.-
T Consensus 147 ~v~ViGgG~~g~e~A~~l~~~g~~Vt-lv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~ 207 (384)
T 2v3a_A 147 RVLLLGAGLIGCEFANDLSSGGYQLD-VVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLG 207 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEE-EEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeC
Confidence 68999999999999999999888765 5554333332210 001124566777899998753
No 499
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=33.55 E-value=40 Score=28.76 Aligned_cols=31 Identities=6% Similarity=-0.093 Sum_probs=26.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEEcC
Q psy5230 2 KIIFAGTSISAAAILDTLYNSEHNIVLILTK 32 (258)
Q Consensus 2 rI~f~Gs~~fa~~~L~~L~~~~~~i~~Vvt~ 32 (258)
||+++|.+..+..+.+++.+.|++++.+-+.
T Consensus 3 ~Ililg~g~~~~~~~~a~~~~G~~v~~~~~~ 33 (365)
T 2z04_A 3 TVGILGGGQLGWMTILEGRKLGFKFHVLEDK 33 (365)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7999999999999999999999998666443
No 500
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=33.47 E-value=39 Score=28.85 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=21.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC
Q psy5230 1 MKIIFAGTSISAAAILDTLYNSEH 24 (258)
Q Consensus 1 mrI~f~Gs~~fa~~~L~~L~~~~~ 24 (258)
|||+++|.+..+..+...|...++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~ 24 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDV 24 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC
Confidence 999999999999999999888764
Done!