BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5231
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P39916|TRXB_COXBU Thioredoxin reductase OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=trxB PE=3 SV=2
Length = 320
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 37/165 (22%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGNTAVEEALYLS+IA VTLIHR +KLR EK+L +L++KV EGK+ I H++ +
Sbjct: 151 VVGGGNTAVEEALYLSHIASHVTLIHRRDKLRAEKMLSAQLIKKVEEGKVAIVWSHVIEE 210
Query: 80 IIGNNT-VTG----------------------------------QLEMND-GYIKTKLNK 103
++G++ VTG QLEM++ GY++ K
Sbjct: 211 VLGDDQGVTGVHLKHVKEEKTQDLTIDGLFIAIGHDPNTKIFKEQLEMDEAGYLRAKSGL 270
Query: 104 KTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ T+TNI GVF T + + + A G GCMAALDA+RYL
Sbjct: 271 QGNATATNIPGVFAAGDVTD-HVYRQAITAAGMGCMAALDAERYL 314
>sp|P43788|TRXB_HAEIN Thioredoxin reductase OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=trxB PE=3 SV=1
Length = 318
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 89/172 (51%), Gaps = 40/172 (23%)
Query: 12 KPVIIFTDVIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDI 71
KPV VIGGGNTAVEEALYL+NIA V LIHR + R EKILIDRL +KV EGKI +
Sbjct: 147 KPV----GVIGGGNTAVEEALYLANIASTVHLIHRRDSFRAEKILIDRLYKKVEEGKIVL 202
Query: 72 KLKHIVHKIIGNNT-----------------------------------VTGQLEMNDGY 96
+ +++G+N GQLE+N+GY
Sbjct: 203 HTDRTLDEVLGDNMGVTGLRLANTKTGEKEELKLDGLFVAIGHSPNTEIFQGQLELNNGY 262
Query: 97 IKTKLNKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
I K T+T++ GVF + + + + G+GCMAALDA+RYL
Sbjct: 263 IVVKSGLDGNATATSVEGVFAAGDVMDHNY-RQAITSAGTGCMAALDAERYL 313
>sp|Q93HX6|GLCAL_PSEFL Glucosaminate ammonia-lyase OS=Pseudomonas fluorescens PE=1 SV=2
Length = 320
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 89/171 (52%), Gaps = 39/171 (22%)
Query: 12 KPVIIFTDVIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDI 71
KPV V+GGGNTAVEEALYL+NIA VTLIHR E R EKILID+L +V EGKI +
Sbjct: 147 KPVA----VVGGGNTAVEEALYLANIASTVTLIHRRETFRAEKILIDKLNARVAEGKIIL 202
Query: 72 KLKHIVHKIIGNNT----------------------------------VTGQLEMNDGYI 97
KL + +++G+N GQL + DGY+
Sbjct: 203 KLNANLDEVLGDNMGVTGARLKNNDGSFDELKVDGVFIAIGHTPNTSLFEGQLTLKDGYL 262
Query: 98 KTKLNKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ + T+T++ G+F + + + + G+GCMAALD +RYL
Sbjct: 263 VVQGGRDGNATATSVEGIFAAGDVAD-HVYRQAITSAGAGCMAALDTERYL 312
>sp|Q9KSS4|TRXB_VIBCH Thioredoxin reductase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=trxB PE=3 SV=1
Length = 318
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 83/164 (50%), Gaps = 36/164 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGNTAVEEALYLSNIA +V L+HR + R EKILIDRLM KV G I + + +
Sbjct: 151 VVGGGNTAVEEALYLSNIASEVHLVHRRDSFRSEKILIDRLMDKVANGNIVLHTHRTLDE 210
Query: 80 IIGNNT-----------------------------------VTGQLEMNDGYIKTKLNKK 104
++G+ GQLEM +GYI K +
Sbjct: 211 VLGDEMGVTGVRLKDTQSDMTENLDVMGVFIAIGHQPNSQIFEGQLEMKNGYIVVKSGLE 270
Query: 105 TGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
T T+I GVF + + + + G+GCMAALDA+RYL
Sbjct: 271 GNATQTSIEGVFAAGDVMDHNY-RQAITSAGTGCMAALDAERYL 313
>sp|P81433|TRXB_BUCAP Thioredoxin reductase OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=trxB PE=3 SV=1
Length = 319
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 81/166 (48%), Gaps = 38/166 (22%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGNTA+EE LYLSN KK+ LIHR + EKILIDRL++ V K+ + L +
Sbjct: 151 VVGGGNTAIEETLYLSNFVKKIYLIHRRNNFKAEKILIDRLLKIVKTKKVILHLNSTIED 210
Query: 80 IIGNNT-------------------------------------VTGQLEMNDGYIKTKLN 102
I+GNN T QL+M DGYIK K
Sbjct: 211 ILGNNKGVTHLLIKNKNLKEKKKLKIAVSGLFVAIGYIPNTDIFTDQLKMKDGYIKIKKG 270
Query: 103 KKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
YT TNI GVF + + + + SGCMAALD++RYL
Sbjct: 271 THGNYTQTNIPGVFAAGDVID-HVYRQAITSSASGCMAALDSERYL 315
>sp|P0A9P4|TRXB_ECOLI Thioredoxin reductase OS=Escherichia coli (strain K12) GN=trxB PE=1
SV=2
Length = 321
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 83/165 (50%), Gaps = 37/165 (22%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGGNTAVEEALYLSNIA +V LIHR + R EKILI RLM KV G I + + +
Sbjct: 151 VIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEE 210
Query: 80 IIGN----------------------------------NTV--TGQLEMNDGYIKTKLNK 103
+ G+ NT GQLE+ +GYIK +
Sbjct: 211 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGI 270
Query: 104 KTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
T T+I GVF + + + + G+GCMAALDA+RYL
Sbjct: 271 HGNATQTSIPGVFAAGDVMD-HIYRQAITSAGTGCMAALDAERYL 314
>sp|P0A9P5|TRXB_ECO57 Thioredoxin reductase OS=Escherichia coli O157:H7 GN=trxB PE=3 SV=2
Length = 321
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 83/165 (50%), Gaps = 37/165 (22%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGGNTAVEEALYLSNIA +V LIHR + R EKILI RLM KV G I + + +
Sbjct: 151 VIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEE 210
Query: 80 IIGN----------------------------------NTV--TGQLEMNDGYIKTKLNK 103
+ G+ NT GQLE+ +GYIK +
Sbjct: 211 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGI 270
Query: 104 KTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
T T+I GVF + + + + G+GCMAALDA+RYL
Sbjct: 271 HGNATQTSIPGVFAAGDVMD-HIYRQAITSAGTGCMAALDAERYL 314
>sp|Q1RJD8|TRXB_RICBR Thioredoxin reductase OS=Rickettsia bellii (strain RML369-C)
GN=trxB PE=3 SV=1
Length = 310
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 87/168 (51%), Gaps = 48/168 (28%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGN+AVEEALYL+N A KVT++HR + R EKIL +RL + KI + H+V +
Sbjct: 150 VVGGGNSAVEEALYLTNHASKVTIVHRRDNFRAEKILQERLFKNP---KISVIWDHVVEE 206
Query: 80 IIGNN---TVTG----------------------------------QLEM-NDGYIKTKL 101
I+GNN +VTG Q+ M ND YI T
Sbjct: 207 IVGNNNPKSVTGVKIQNVHTKETSLVNCSGVFVAIGHKPNTALFAEQVTMDNDNYIIT-- 264
Query: 102 NKKTGYTSTNISGVFCRWRCT-RLYFIDKQLLALGSGCMAALDAQRYL 148
G T TNI GVF ++Y + + A G+GCMAAL+A+++L
Sbjct: 265 --TPGSTKTNIEGVFAAGDVQDKIY--RQAITAAGTGCMAALEAEKFL 308
>sp|P57399|TRXB_BUCAI Thioredoxin reductase OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=trxB PE=3 SV=1
Length = 319
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 85/166 (51%), Gaps = 38/166 (22%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGNTA+EE LYLSN KKV LIHR R EKIL+DRL +K+ KI I L IV
Sbjct: 151 VVGGGNTAIEETLYLSNFVKKVHLIHRGINFRAEKILLDRLEKKIKSQKIIIYLNSIVKN 210
Query: 80 IIGNNT---------------------VTG----------------QLEMNDGYIKTKLN 102
I+GN++ V+G +L+M DGYI+
Sbjct: 211 ILGNSSGVTALLIEQKNSKEKTESKIQVSGLFVAIGYTPNTNIFVNKLKMKDGYIQVTRQ 270
Query: 103 KKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ YT T+I G+F + + + + SGCMAALD++RY+
Sbjct: 271 EHGNYTQTSIPGIFAAGDVID-HVYRQAITSSASGCMAALDSERYI 315
>sp|Q92I02|TRXB_RICCN Thioredoxin reductase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=trxB PE=3 SV=1
Length = 310
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 87/168 (51%), Gaps = 48/168 (28%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGN+AVEEALYL+N A KVT++HR + R EKIL DRL + KI + H+V +
Sbjct: 150 VVGGGNSAVEEALYLTNHANKVTIVHRRDSFRAEKILQDRLFKN---SKISVIWDHVVDE 206
Query: 80 IIGNNT-------------------------------------VTGQLEM-NDGYIKTKL 101
I+G+N TGQ+ M +D YI T
Sbjct: 207 IVGSNKPKSVTGVKIQNVHTKEISLLNCSGVFIAIGHAPNTGLFTGQIVMDDDNYIIT-- 264
Query: 102 NKKTGYTSTNISGVFCRWRCT-RLYFIDKQLLALGSGCMAALDAQRYL 148
K+G T T++ GVF ++Y + + A G+GCMAAL+A+++L
Sbjct: 265 --KSGTTRTSVEGVFAAGDVQDKIY--RQAVTAAGTGCMAALEAEKFL 308
>sp|Q4ULP1|TRXB_RICFE Thioredoxin reductase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=trxB PE=3 SV=1
Length = 310
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 48/168 (28%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGN+AVEEALYL+N A KVT+ HR + R EKIL DRL + KI + H+V +
Sbjct: 150 VVGGGNSAVEEALYLTNHASKVTITHRRDSFRAEKILQDRLFKNP---KISVIWDHVVDE 206
Query: 80 IIGNNT-------------------------------------VTGQLEM-NDGYIKTKL 101
I+G++ TGQ+ M +D YI T
Sbjct: 207 IVGSDKPKSVTGVKIQNVHTKEISLVNCSGVFIAIGHAPNTGLFTGQIAMDDDNYIIT-- 264
Query: 102 NKKTGYTSTNISGVFCRWRCT-RLYFIDKQLLALGSGCMAALDAQRYL 148
K+G T T++ GVF ++Y + + A GSGCMAAL+ +++L
Sbjct: 265 --KSGTTKTSVEGVFAAGDVQDKIY--RQAVTAAGSGCMAALEVEKFL 308
>sp|Q89AJ2|TRXB_BUCBP Thioredoxin reductase OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=trxB PE=3 SV=1
Length = 326
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 81/165 (49%), Gaps = 38/165 (23%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGNTA+EEALYLSNIA+KV LIHR + EKILI R++ K + I ++ IV+K
Sbjct: 156 VVGGGNTALEEALYLSNIARKVYLIHRRKTFSAEKILISRMLNKTKK-NIILRTGCIVNK 214
Query: 80 IIGN-NTVTG-----------------------------------QLEMNDGYIKTKLNK 103
IIG N V G QL M + YI K
Sbjct: 215 IIGGVNGVRGVQITCNDSKENKCLINLSGVFIAIGHAPNTKLFKNQLFMKNDYILVKSGI 274
Query: 104 KTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
T TNI G+F + + + + SGCMAALDA++Y+
Sbjct: 275 HGNVTQTNIPGIFAAGDVID-HVYKQAITSSASGCMAALDAEKYI 318
>sp|Q68WT3|TRXB_RICTY Thioredoxin reductase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=trxB PE=3 SV=1
Length = 310
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 48/168 (28%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGN+A+EEALYL+N A KVT++HR R EKIL DRL + KI + H++ +
Sbjct: 150 VVGGGNSALEEALYLTNHANKVTVVHRRNSFRAEKILQDRLFKNP---KISVIWDHVIDE 206
Query: 80 IIGNN---TVT----------------------------------GQLEM-NDGYIKTKL 101
I+G+N TVT GQ+ + +D YI T
Sbjct: 207 IVGSNQPKTVTGVKIKNVYTNEINLVNCSGVFIAIGHTPNTTLFNGQIAIDDDNYIIT-- 264
Query: 102 NKKTGYTSTNISGVFCRWRCT-RLYFIDKQLLALGSGCMAALDAQRYL 148
+TG T T++ GVF ++Y + + A SGCMAAL+ ++L
Sbjct: 265 --QTGSTRTSVEGVFAAGDVQDKIY--RQAITAAASGCMAALEVAKFL 308
>sp|Q9ZD97|TRXB_RICPR Thioredoxin reductase OS=Rickettsia prowazekii (strain Madrid E)
GN=trxB PE=3 SV=1
Length = 310
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 48/168 (28%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGGN+A+EEALYL+N A KVT++HR R EKIL DRL + KI + HI+ +
Sbjct: 150 VVGGGNSALEEALYLTNHANKVTVVHRRNSFRAEKILQDRLFKNP---KISVIWDHIIDE 206
Query: 80 IIGNN---TVT----------------------------------GQLEM-NDGYIKTKL 101
I+G+N VT GQ+ + +D YI T
Sbjct: 207 IVGSNKPKAVTGVKIQNVYTNEINLVNCSGVFIAIGHAPNTALFKGQIAIDDDNYIVT-- 264
Query: 102 NKKTGYTSTNISGVFCRWRCT-RLYFIDKQLLALGSGCMAALDAQRYL 148
++G T TN+ GVF ++Y + + A SGCMAAL+ ++L
Sbjct: 265 --QSGSTRTNVEGVFAAGDVQDKIY--RQAVTAAASGCMAALEVAKFL 308
>sp|P52214|TRXB_MYCTU Thioredoxin reductase OS=Mycobacterium tuberculosis GN=trxB PE=1
SV=2
Length = 335
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 37/161 (22%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++A+EEA +L+ A+ VTL+HR ++ R KI++DR N KI H V
Sbjct: 160 VIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRAR---NNDKIRFLTNHTVVA 216
Query: 80 IIGNNTVTG-----------------------QLEMNDGYIKTKLN-KKTGY-------T 108
+ G+ TVTG E G ++ ++ GY T
Sbjct: 217 VDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTT 276
Query: 109 STNISGVFCRWR-CTRLYFIDKQLLALGSGCMAALDAQRYL 148
ST++ GVF R Y + + A GSGC AA+DA+R+L
Sbjct: 277 STSLPGVFAAGDLVDRTY--RQAVTAAGSGCAAAIDAERWL 315
>sp|Q05741|TRXB_STRC2 Thioredoxin reductase OS=Streptomyces clavuligerus (strain ATCC
27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 /
NRRL 3585 / VKM Ac-602) GN=trxB PE=1 SV=3
Length = 322
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 43/164 (26%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG+TA+EEA +LS AK VT++HR + LR K + DR + KI V
Sbjct: 151 VVGGGDTAMEEATFLSRFAKSVTIVHRRDSLRASKAMQDRAFA---DPKISFAWNSEVAT 207
Query: 80 IIGNNTVT----------------------------------GQLEMND-GYIKTKLNKK 104
I G +T GQL+++D GY+K
Sbjct: 208 IHGEQKLTGLTLRDTKTGETRELAATGLFIAVGHDPRTELFKGQLDLDDEGYLKV----A 263
Query: 105 TGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ T TN++GVF + + + A G+GC AALDA+RYL
Sbjct: 264 SPSTRTNLTGVFAAGDVVDHTY-RQAITAAGTGCSAALDAERYL 306
>sp|P51978|TRXB_NEUCR Thioredoxin reductase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cys-9
PE=3 SV=1
Length = 334
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 39/163 (23%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQ------KVNEGKIDIK- 72
VIGGG++A EEA+YL+ VT++ R +KLR I+ RL+ + N +++K
Sbjct: 157 VIGGGDSAAEEAMYLTKYGSHVTVLVRKDKLRASSIMAHRLLNHEKVTVRFNTVGVEVKG 216
Query: 73 -----LKHIVHK-----------------IIGNNTVT----GQLEMN-DGYIKTKLNKKT 105
+ H+V K IG++ T GQLE + DGY+ T K
Sbjct: 217 DDKGLMSHLVVKDVTTGKEETLEANGLFYAIGHDPATALVKGQLETDADGYVVT----KP 272
Query: 106 GYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
G T T++ GVF + + + + G+GCMAALDA+++L
Sbjct: 273 GTTLTSVEGVFAAGDVQDKRY-RQAITSAGTGCMAALDAEKFL 314
>sp|O30973|TRXB_MYCSM Thioredoxin reductase OS=Mycobacterium smegmatis GN=trxB PE=3 SV=1
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 43/164 (26%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG++A+EEA +L+ A+ VTLIHR ++ R KI+++R + NE KI + +
Sbjct: 152 VVGGGDSAMEEATFLTRFARSVTLIHRRDEFRASKIMLERA--RANE-KITFLTNTEITQ 208
Query: 80 IIGNNTVT----------------------------------GQLEMND-GYIKTKLNKK 104
I G+ VT GQ+E++D GY+ K+ +
Sbjct: 209 IEGDPKVTGVRLRDTVTGEESKLDVTGVFVAIGHDPRSELVRGQVELDDEGYV--KVQGR 266
Query: 105 TGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
T YTS + GVF + + + A GSGC A++DA+R+L
Sbjct: 267 TTYTS--LDGVFAAGDLVDHTY-RQAITAAGSGCAASIDAERWL 307
>sp|P46843|TRXB_MYCLE Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium
leprae (strain TN) GN=trxB/A PE=3 SV=1
Length = 458
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 75/165 (45%), Gaps = 45/165 (27%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++A+EEAL+L+ A+ VTL+HR ++ R KI++ R N KI H V
Sbjct: 157 VIGGGDSAMEEALFLTRFARSVTLVHRRDEFRASKIMLGRAR---NNDKIKFITNHTVVA 213
Query: 80 IIGNNTVTGQLEMN-----------------------------------DGYIKTKLNKK 104
+ G TVTG N DGY+ K
Sbjct: 214 VNGYTTVTGLRLRNTTTGEETTLVVTGVFVAIGHEPRSSLVSDVVDIDPDGYVLVKGRT- 272
Query: 105 TGYTSTNISGVFCRWRCT-RLYFIDKQLLALGSGCMAALDAQRYL 148
TST++ GVF R Y + + A GSGC AA+DA+R+L
Sbjct: 273 ---TSTSMDGVFAAGDLVDRTY--RQAITAAGSGCAAAIDAERWL 312
>sp|Q9PKT7|TRXB_CHLMU Thioredoxin reductase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=trxB PE=3 SV=1
Length = 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 47/172 (27%)
Query: 16 IFTD----VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDI 71
IF D VIGGG++A+EEA++L+ K+V ++HR + LR K ++++ + NE KI
Sbjct: 147 IFRDRDLFVIGGGDSALEEAMFLTRYGKRVFVVHRRDTLRASKAMVNK--AQANE-KIVF 203
Query: 72 KLKHIVHKIIGNN--------------TVT--------------------GQLEMND-GY 96
V KI+G++ TVT GQL +++ GY
Sbjct: 204 LWNSEVVKILGDSLVRSIDIFNNVEKTTVTMEAAGVFFAIGHQPNTAFLGGQLSLDENGY 263
Query: 97 IKTKLNKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
I T+ G + T++ GVF Y+ + + + GSGCMAALDA+R+L
Sbjct: 264 IITE----KGSSRTSVPGVFAAGDVQDKYY-RQAITSAGSGCMAALDAERFL 310
>sp|Q39242|TRXB2_ARATH Thioredoxin reductase 2 OS=Arabidopsis thaliana GN=NTR2 PE=2 SV=2
Length = 383
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 44/172 (25%)
Query: 12 KPVIIFTDVIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKV------- 64
KP++ VIGGG++A+EEA +L+ KV +IHR + R KI+ R +
Sbjct: 210 KPLV----VIGGGDSAMEEANFLTKYGSKVYIIHRRDTFRASKIMQQRALSNPKIEVIWN 265
Query: 65 ---------NEGKI--DIKLKHIVHK------------IIGNNTVT----GQLEMN-DGY 96
G++ +K+K++V IG+ T GQLE++ DGY
Sbjct: 266 SAVVEAYGDENGRVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGQLELDEDGY 325
Query: 97 IKTKLNKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ T K G T T++ GVF + + + A G+GCMAALDA+ YL
Sbjct: 326 VVT----KPGTTKTSVVGVFAAGDVQDKKY-RQAITAAGTGCMAALDAEHYL 372
>sp|Q69PS6|NTRA_ORYSJ Thioredoxin reductase NTRA OS=Oryza sativa subsp. japonica
GN=Os06g0327300 PE=2 SV=2
Length = 368
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 44/172 (25%)
Query: 12 KPVIIFTDVIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLM-----QKVNE 66
KP+ V+GGG++A+EEA +L+ +V +IHR R KI+ R + Q V +
Sbjct: 195 KPIA----VVGGGDSAMEEANFLTKYGSRVYIIHRRNAFRASKIMQARALSNPKIQVVWD 250
Query: 67 GKI-------------DIKLKHIVHK------------IIGNNTVT----GQLEMN-DGY 96
++ +K+K++V IG+ T GQLE++ DGY
Sbjct: 251 SEVVEAYGGADGGPLAGVKVKNVVSGEVSDLQVAGLFFAIGHEPATKFLGGQLELDSDGY 310
Query: 97 IKTKLNKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ T K G T T++ GVF + + + A GSGCMAALDA+ YL
Sbjct: 311 VVT----KPGSTHTSVKGVFAAGDVQDKKY-RQAITAAGSGCMAALDAEHYL 357
>sp|Q39243|TRXB1_ARATH Thioredoxin reductase 1 OS=Arabidopsis thaliana GN=NTR1 PE=1 SV=3
Length = 375
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 40/164 (24%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDR--------------LMQKVN 65
VIGGG++A+EEA +L+ KV +IHR + R KI+ R +++
Sbjct: 206 VIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYG 265
Query: 66 EGKIDI----KLKHIVHK------------IIGNNTVT----GQLEMN-DGYIKTKLNKK 104
+G+ D+ K+K++V IG+ T G +E++ DGY+ T K
Sbjct: 266 DGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVT----K 321
Query: 105 TGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
G T T++ GVF + + + A G+GCMAALDA+ YL
Sbjct: 322 PGTTQTSVPGVFAAGDVQDKKY-RQAITAAGTGCMAALDAEHYL 364
>sp|Q8T6Z1|TRXB_SPIBA Thioredoxin reductase (Fragment) OS=Spironucleus barkhanus GN=TRXB
PE=2 SV=1
Length = 305
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 37/163 (22%)
Query: 18 TDVIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQK----------VNEG 67
T V+GGG+ A EEA YLSNIA KV LI R + R ++ R+ V E
Sbjct: 142 TVVVGGGDVACEEASYLSNIASKVYLILRRDAFRASAAMVQRVKSNPKIEIIYNSAVQEI 201
Query: 68 KIDIKLKHIVHKIIGNNTVT---------------------GQLEMND-GYIKTKLNKKT 105
K + ++ I+ K + + +T GQ++M++ GYI + +T
Sbjct: 202 KGETRVNQILVKNLKSGDITPLKVEALFWCIGHTPQTRLLKGQVKMSENGYI--LVENQT 259
Query: 106 GYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
Y TN+ G+F C + + ++A GSGC AALDA+R+L
Sbjct: 260 QY--TNVPGIFAAGDCCD-WIYRQAIVAAGSGCKAALDAERWL 299
>sp|P43496|TRXB_PENCH Thioredoxin reductase OS=Penicillium chrysogenum GN=TRR1 PE=1 SV=3
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 61/175 (34%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++A EEA++L+ VT++ R +KLR I+ DRL+ K ++ + +
Sbjct: 162 VIGGGDSAAEEAMFLAKYGSSVTVLVRKDKLRASNIMADRLLAHP---KCKVRFNTVATE 218
Query: 80 IIGNNT--------------------------------------VTGQLEMND-GYIKTK 100
+IG N V GQ+E++D GYI T
Sbjct: 219 VIGENKPNGLMTHLRVKDVLSNAEEVVEANGLFYAVGHDPASGLVKGQVELDDEGYIIT- 277
Query: 101 LNKKTGYTSTNISGVFC-------RWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
K G + TN+ GVF R+R + + + GSGC+AAL+A++++
Sbjct: 278 ---KPGTSFTNVEGVFACGDVQDKRYR--------QAITSAGSGCVAALEAEKFI 321
>sp|O84101|TRXB_CHLTR Thioredoxin reductase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=trxB PE=3 SV=2
Length = 312
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 41/169 (24%)
Query: 16 IFTD----VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLM--QKV----N 65
IF D V+GGG++A+EEA++L+ K+V ++HR + LR K+++++ +K+ N
Sbjct: 147 IFRDKDLFVVGGGDSALEEAMFLTRYGKRVFVVHRRDTLRASKVMVNKAQANEKIFFLWN 206
Query: 66 EGKIDIKLKHIVHKI---------------------IGNNTVT----GQLEMND-GYIKT 99
+ I +V I IG+ T GQ+ +++ GYI T
Sbjct: 207 SEIVKISGDTLVRSIDIYNNVDETTTTMEAAGVFFAIGHQPNTAFLGGQVALDENGYIIT 266
Query: 100 KLNKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ G + T++ GVF Y+ + + + GSGCMAALDA+R+L
Sbjct: 267 ----EKGSSRTSVPGVFAAGDVQDKYY-RQAITSAGSGCMAALDAERFL 310
>sp|P52215|TRXB_STRCO Thioredoxin reductase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=trxB PE=3 SV=3
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 37/161 (22%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLM----------QKVNEGKI 69
VIGGG+TA+EEA +LS AK VT++HR + LR K + +R +V E +
Sbjct: 151 VIGGGDTAMEEATFLSRFAKSVTIVHRRDTLRASKAMQERAFADPKISFVWDSEVAEVQG 210
Query: 70 DIKLKHIVHK-----------------IIGNNTVT----GQLEMN-DGYIKTKLNKKTGY 107
D KL + + IG++ T GQL+++ +GY+K
Sbjct: 211 DQKLAGLKLRNVKTGELSDLPVTGLFIAIGHDPRTELFKGQLDLDPEGYLKVDAPS---- 266
Query: 108 TSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
T TN++GVF + + + A G+GC AA+DA+ +L
Sbjct: 267 TRTNLTGVFGAGDVVDHTY-RQAITAAGTGCSAAVDAEPFL 306
>sp|Q928B5|TRXB_LISIN Thioredoxin reductase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=trxB PE=3 SV=1
Length = 319
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG++AVEE YL+ A KVT++HR +KLR ++IL DR + + K+D + V +
Sbjct: 151 VVGGGDSAVEEGTYLTRYADKVTIVHRRDKLRAQQILQDRAFK---DEKVDFIWNNTVEE 207
Query: 80 IIGN----------NTVTGQ---------------LEMNDGYIKTKLNKKTGY------T 108
IIG+ +TV G + + ++ + + GY
Sbjct: 208 IIGDGKKVTSVKLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLSLGITDEEGYIVTDEEM 267
Query: 109 STNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
TN+ G+F R + + + A G G +A +AQ+Y+
Sbjct: 268 RTNLPGIFAAGDV-RAKSLRQIVTATGDGGLAGQNAQKYV 306
>sp|Q6HA24|TRXB_KLULA Thioredoxin reductase, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TRR1 PE=3 SV=1
Length = 349
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 44/165 (26%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++A EEA +L+ KV ++ R + LR +I+ R Q NE KI+I H+ +
Sbjct: 189 VIGGGDSACEEAQFLTKYGSKVYMLVRKDHLRASQIMQRRAEQ--NE-KIEILYNHVTLE 245
Query: 80 IIGN-----------------------------------NTVTGQLEMND-GYIKTKLNK 103
G+ N V GQ+++++ GY+KT
Sbjct: 246 AKGDGKYLNALKVKNVKTNEEYDLPVNGLFYAIGHTPATNIVAGQVDLDEAGYVKTV--- 302
Query: 104 KTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
G T TN+ GVF + + + + GSGCMAALDA++Y+
Sbjct: 303 -PGSTLTNVPGVFAAGDVQDARY-RQAITSAGSGCMAALDAEKYI 345
>sp|Q9Z8M4|TRXB_CHLPN Thioredoxin reductase OS=Chlamydia pneumoniae GN=trxB PE=3 SV=1
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 43/164 (26%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++A+EEALYL+ V ++HR +KLR K + R N KI + K
Sbjct: 155 VIGGGDSALEEALYLTRYGSHVYVVHRRDKLRASKAMEARAQ---NNEKITFLWNSEIVK 211
Query: 80 IIGNNTVT----------------------------------GQLEMND-GYIKTKLNKK 104
I G++ V GQL +++ GYI T+
Sbjct: 212 ISGDSIVRSVDIKNVQTQEITTREAAGVFFAIGHKPNTDFLGGQLTLDESGYIVTE---- 267
Query: 105 TGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
G + T++ GVF Y+ + + + GSGC+AALDA+R+L
Sbjct: 268 KGTSKTSVPGVFAAGDVQDKYY-RQAVTSAGSGCIAALDAERFL 310
>sp|Q6ZFU6|NTRB_ORYSJ Thioredoxin reductase NTRB OS=Oryza sativa subsp. japonica GN=NTRB
PE=2 SV=1
Length = 331
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 44/172 (25%)
Query: 12 KPVIIFTDVIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLM---------- 61
KP+ VIGGG++A+EE+ +L+ V +IHR R KI+ R +
Sbjct: 158 KPIA----VIGGGDSAMEESNFLTKYGSHVYIIHRRNTFRASKIMQARALSNPKIQVFWD 213
Query: 62 QKVNEGK--------IDIKLKHIVHK------------IIGNNTVT----GQLEMN-DGY 96
+V E +K+K++V IG+ T GQLE++ DGY
Sbjct: 214 SEVVEAYGGEGGGPLAGVKVKNLVTGKISDLQVSGLFFAIGHEPATKFLGGQLELDADGY 273
Query: 97 IKTKLNKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ T K G T T++ GVF + + + A GSGCMAALDA+ YL
Sbjct: 274 VAT----KPGSTHTSVKGVFAAGDVQDKKY-RQAITAAGSGCMAALDAEHYL 320
>sp|O32823|TRXB_LISMO Thioredoxin reductase OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=trxB PE=3 SV=1
Length = 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG++AVEE YL+ A KVT++HR +KLR ++IL DR + + K+D V +
Sbjct: 151 VVGGGDSAVEEGTYLTRYADKVTIVHRRDKLRAQQILQDRAFK---DEKVDFIWNSTVEE 207
Query: 80 IIGN----------NTVTGQ---------------LEMNDGYIKTKLNKKTGY------T 108
I+G+ +TV G + + ++ + GY
Sbjct: 208 IVGDGKKVTGAKLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEM 267
Query: 109 STNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
TN+ G+F R + + + A G G +A +AQ+Y+
Sbjct: 268 RTNLPGIFAAGDV-RAKSLRQIVTATGDGGLAGQNAQKYV 306
>sp|O22229|TRXB3_ARATH NADPH-dependent thioredoxin reductase 3 OS=Arabidopsis thaliana
GN=NTRC PE=1 SV=2
Length = 529
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 53/170 (31%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDR-------------------- 59
V+GGG+TA EEALYL+ A+ V L+ R ++LR K + DR
Sbjct: 234 VVGGGDTATEEALYLTKYARHVHLLVRRDQLRASKAMQDRVINNPNITVHYNTETVDVLS 293
Query: 60 ---------LMQKVNEG-KIDIKLKHIVHKI---IGNNTVTGQLEMN-DGYIKTKLNKKT 105
L+++++ G + +++ K + + I + + GQ+E++ GY+ +
Sbjct: 294 NTKGQMSGILLRRLDTGEETELEAKGLFYGIGHSPNSQLLEGQVELDSSGYVLV----RE 349
Query: 106 GYTSTNISGVFC-------RWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
G ++T++ GVF WR + + A GSGC+AAL A+RYL
Sbjct: 350 GTSNTSVEGVFAAGDVQDHEWR--------QAVTAAGSGCIAALSAERYL 391
>sp|Q54UU8|TRXB_DICDI Thioredoxin reductase OS=Dictyostelium discoideum GN=trrA PE=3 SV=1
Length = 319
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 47/166 (28%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKV-NEGKIDIKLKHIVH 78
V+GGG+TA EEA +L++ A KVTL+ R +R K + QKV + KI++ +
Sbjct: 161 VVGGGDTAAEEATFLTHFASKVTLLVRRNVMRASKA----MQQKVFSNPKIEVLWDTTLV 216
Query: 79 KIIGNNTVT----------------------------------GQLEMND-GYIKTKLNK 103
+I G +VT GQL ++ GYI T
Sbjct: 217 EIKGEKSVTSVGIYNSETKVSSNLDAQGLFYAIGHTPNSAFLNGQLNTDETGYIIT---- 272
Query: 104 KTGYTSTNISGVF-CRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ G T TN+ GVF C ++Y + + A G+GCMAALD +R+L
Sbjct: 273 QPGSTKTNVEGVFACGDVQDKVY--RQAITAAGNGCMAALDCERFL 316
>sp|P50971|TRXB_EUBAC Thioredoxin reductase OS=Eubacterium acidaminophilum GN=trxB PE=1
SV=1
Length = 315
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 44/167 (26%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKV------NEGKIDIKL 73
V+GGG+TAVEEA+YL+ A+KVT++HR ++LR K + ++ + N +IK
Sbjct: 149 VVGGGDTAVEEAMYLAKFARKVTIVHRRDELRAAKSIQEKAFKNPKLDFMWNSAIEEIKG 208
Query: 74 KHIVHKIIGNNTVTGQ-------------------------------LEMND-GYIKTKL 101
IV + N VTG+ + ++D GYI T
Sbjct: 209 DGIVESAVFKNLVTGETTEYFANEEDGTFGIFVFIGYIPKSDVFKGKITLDDAGYIITDD 268
Query: 102 NKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
N K TN+ GVF R+ + + + A G +AA A++Y+
Sbjct: 269 NMK-----TNVEGVFAAGDI-RVKSLRQVVTACADGAIAATQAEKYV 309
>sp|Q70G58|NTRC_ORYSJ Thioredoxin reductase NTRC OS=Oryza sativa subsp. japonica
GN=Os07g0657900 PE=1 SV=2
Length = 515
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 53/170 (31%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVN-------------- 65
V+GGG+TA EEA+YL+ A+ V L+ R ++LR K + DR++ N
Sbjct: 220 VVGGGDTATEEAIYLTKYARHVHLLVRKDQLRASKAMQDRVLNNPNITVHFNTEAVDVVS 279
Query: 66 --EGKID-IKLKHI------VHKIIG----------NNTVTGQLEMND-GYIKTKLNKKT 105
+G++ I+LK V ++ G + + GQ++++D GYI +
Sbjct: 280 NPKGQMSGIQLKRTDTGEESVLEVKGLFYGIGHTPNSQLLQGQIDLDDAGYILV----EE 335
Query: 106 GYTSTNISGVFC-------RWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
G T++ GVF WR + + A GSGC+AAL +RYL
Sbjct: 336 GTAKTSVDGVFAAGDVQDHEWR--------QAVTAAGSGCVAALSVERYL 377
>sp|P52213|TRXB_CLOLI Thioredoxin reductase OS=Clostridium litorale GN=trxB PE=3 SV=1
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 50/170 (29%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG+TAVEEA++L+ A+KVT++HR +LR K + ++ + NE K++ ++ +
Sbjct: 149 VIGGGDTAVEEAMFLTKFARKVTIVHRRAELRAAKSIQEKAFK--NE-KLNFMWNTVIEE 205
Query: 80 IIGNNT----------------------------------------VTGQLEMND-GYIK 98
I G+ V G+LE+++ GYI
Sbjct: 206 IKGDGIVESAVFKNRETGEVTEFVAPEEDGTFGIFVFIGYDPKSALVEGKLELDETGYIP 265
Query: 99 TKLNKKTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
T N K TN+ GVF R+ + + + A G +AA+ A++Y+
Sbjct: 266 TDDNMK-----TNVEGVFAAGDI-RVKSLRQVVTATADGAIAAVQAEKYI 309
>sp|Q9ZL18|TRXB_HELPJ Thioredoxin reductase OS=Helicobacter pylori (strain J99) GN=trxB
PE=3 SV=1
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG+TAVEEA+YL+NI KKV LIHR + RC I ++ N KI+ ++V +
Sbjct: 148 VLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAK---NNSKIEFLTPYVVEE 204
Query: 80 IIGNNTVTGQLEMND 94
I G+ + L + +
Sbjct: 205 IKGDASGVSSLSIKN 219
>sp|P80880|TRXB_BACSU Thioredoxin reductase OS=Bacillus subtilis (strain 168) GN=trxB
PE=1 SV=3
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG++AVEE +YL+ A KVT++HR +KLR + IL R NE K+D V +
Sbjct: 150 VVGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFD--NE-KVDFLWNKTVKE 206
Query: 80 I------IGN----NTVTGQ---------------LEMNDGYIKTKLNKKTGYTSTN--- 111
I +GN +TVTG+ L ++ + + + GY TN
Sbjct: 207 IHEENGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLPLSKPFENLGITNEEGYIETNDRM 266
Query: 112 ---ISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ G+F R + + + A G G +AA Q Y+
Sbjct: 267 ETKVEGIFAAGDI-REKSLRQIVTATGDGSIAAQSVQHYV 305
>sp|P56431|TRXB_HELPY Thioredoxin reductase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=trxB PE=1 SV=1
Length = 311
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG+TAVEEA+YL+NI KKV LIHR + RC I ++ N KI+ ++V +
Sbjct: 148 VLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAK---NNDKIEFLTPYVVEE 204
Query: 80 IIGNNTVTGQLEMND 94
I G+ + L + +
Sbjct: 205 IKGDASGVSSLSIKN 219
>sp|Q6FR39|TRXB_CANGA Thioredoxin reductase OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TRR1 PE=3
SV=1
Length = 319
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 40/163 (24%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQ----------------- 62
VIGGG++A EEA +L+ KV LI R + LR I+ R Q
Sbjct: 159 VIGGGDSACEEAQFLTKYGSKVYLIVRKDHLRASTIMQRRAEQNDKIEILYNTVTLEAQG 218
Query: 63 -------------KVNEGKIDIKLKHIVHKI---IGNNTVTGQLEMND-GYIKTKLNKKT 105
K NE + D+ + + + I V GQ+E ++ GYIKT
Sbjct: 219 DGKLLNNLRIKNVKTNE-ETDLPVNGLFYAIGHTPATKIVEGQVETDETGYIKT----IP 273
Query: 106 GYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
G + T++ GVF + + + + GSGCMA LDA++YL
Sbjct: 274 GSSLTSVPGVFAAGDVQDSKY-RQAITSAGSGCMAGLDAEKYL 315
>sp|Q6C7L4|TRXB_YARLI Thioredoxin reductase OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=TRR1 PE=3 SV=1
Length = 319
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 44/165 (26%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG++A EEAL+L+ KV +I R +KLR ++ RL + K++I H+ +
Sbjct: 159 VVGGGDSAAEEALFLTKYGSKVYVIVRKDKLRASAVMAKRL---ASHPKVEILFNHVSIE 215
Query: 80 IIGN----------NTVTGQ---LEMN-----------------------DGYIKTKLNK 103
G+ NT+TG+ LE+N +GY+ T
Sbjct: 216 AKGDGKLLNALEIENTLTGEKRDLEVNGLFYAIGHIPATSIVKGQVETDEEGYVVT---- 271
Query: 104 KTGYTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
G +T++ GVF + + + + G+GCMAALD ++ L
Sbjct: 272 VPGTANTSVKGVFAAGDVQDKRY-RQAITSAGTGCMAALDCEKLL 315
>sp|P66011|TRXB_STAAW Thioredoxin reductase OS=Staphylococcus aureus (strain MW2) GN=trxB
PE=1 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++AVEE +L+ A KVT++HR ++LR ++IL DR + KID H +
Sbjct: 149 VIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKN---DKIDFIWSHTLKS 205
Query: 80 I------IGNNTVT----GQLEMN--DG---YIKTK----------LNKKTGY------T 108
I +G+ T+T G E + DG YI K + GY
Sbjct: 206 INEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDM 265
Query: 109 STNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+T++ G+F R + + + A G G +AA A Y+
Sbjct: 266 TTSVPGIFAAGDV-RDKGLRQIVTATGDGSIAAQSAAEYI 304
>sp|Q6GB66|TRXB_STAAS Thioredoxin reductase OS=Staphylococcus aureus (strain MSSA476)
GN=trxB PE=3 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++AVEE +L+ A KVT++HR ++LR ++IL DR + KID H +
Sbjct: 149 VIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKN---DKIDFIWSHTLKS 205
Query: 80 I------IGNNTVT----GQLEMN--DG---YIKTK----------LNKKTGY------T 108
I +G+ T+T G E + DG YI K + GY
Sbjct: 206 INEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDM 265
Query: 109 STNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+T++ G+F R + + + A G G +AA A Y+
Sbjct: 266 TTSVPGIFAAGDV-RDKGLRQIVTATGDGSIAAQSAAEYI 304
>sp|P99101|TRXB_STAAN Thioredoxin reductase OS=Staphylococcus aureus (strain N315)
GN=trxB PE=1 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++AVEE +L+ A KVT++HR ++LR ++IL DR + KID H +
Sbjct: 149 VIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKN---DKIDFIWSHTLKS 205
Query: 80 I------IGNNTVT----GQLEMN--DG---YIKTK----------LNKKTGY------T 108
I +G+ T+T G E + DG YI K + GY
Sbjct: 206 INEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDM 265
Query: 109 STNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+T++ G+F R + + + A G G +AA A Y+
Sbjct: 266 TTSVPGIFAAGDV-RDKGLRQIVTATGDGSIAAQSAAEYI 304
>sp|P66010|TRXB_STAAM Thioredoxin reductase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=trxB PE=1 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++AVEE +L+ A KVT++HR ++LR ++IL DR + KID H +
Sbjct: 149 VIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKN---DKIDFIWSHTLKS 205
Query: 80 I------IGNNTVT----GQLEMN--DG---YIKTK----------LNKKTGY------T 108
I +G+ T+T G E + DG YI K + GY
Sbjct: 206 INEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDM 265
Query: 109 STNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+T++ G+F R + + + A G G +AA A Y+
Sbjct: 266 TTSVPGIFAAGDV-RDKGLRQIVTATGDGSIAAQSAAEYI 304
>sp|Q5HHQ4|TRXB_STAAC Thioredoxin reductase OS=Staphylococcus aureus (strain COL) GN=trxB
PE=3 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++AVEE +L+ A KVT++HR ++LR ++IL DR + KID H +
Sbjct: 149 VIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKN---DKIDFIWSHTLKS 205
Query: 80 I------IGNNTVT----GQLEMN--DG---YIKTK----------LNKKTGY------T 108
I +G+ T+T G E + DG YI K + GY
Sbjct: 206 INEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDM 265
Query: 109 STNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+T++ G+F R + + + A G G +AA A Y+
Sbjct: 266 TTSVPGIFAAGDV-RDKGLRQIVTATGDGSIAAQSAAEYI 304
>sp|Q7Z7S3|TRXB_PNECA Thioredoxin reductase OS=Pneumocystis carinii GN=TRR1 PE=2 SV=1
Length = 325
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 70/165 (42%), Gaps = 58/165 (35%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
V+GGG++A EE+L+L+ A KV L+ R +KLR I+ RL+ KI+I + +
Sbjct: 157 VVGGGDSAAEESLFLTRYATKVYLLVRRDKLRASPIMAKRLLHHP---KIEILWNTVALE 213
Query: 80 IIGNNT-----------------------------------VTGQLEMN-DGYIKTKLNK 103
+G+N V GQ+E + DGYI T
Sbjct: 214 SLGDNNLMNCVKIKNVKTQEVSELQVNGLFYAIGHEPATTLVRGQVECDKDGYIIT---- 269
Query: 104 KTGYTSTNISGVFC-------RWRCTRLYFIDKQLLALGSGCMAA 141
K G TNI G F +WR + + + GSGCMA
Sbjct: 270 KNGGPETNIKGFFAAGDVQDKKWR--------QAVTSAGSGCMAG 306
>sp|P38816|TRXB2_YEAST Thioredoxin reductase 2, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TRR2 PE=1 SV=1
Length = 342
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 38/162 (23%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVN----------EGKI 69
VIGGG++A EEA +L+ A KV ++ R + R I+ R+ + N E K
Sbjct: 182 VIGGGDSACEEAEFLTKYASKVYILVRKDHFRASVIMQRRIEKNPNIIVLFNTVALEAKG 241
Query: 70 DIKLKHIVH------------------KIIGNNTVT----GQL-EMNDGYIKTKLNKKTG 106
D KL +++ IG++ T GQ+ E GYIKT G
Sbjct: 242 DGKLLNMLRIKNTKSNVENDLEVNGLFYAIGHSPATDIVKGQVDEEETGYIKT----VPG 297
Query: 107 YTSTNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+ T++ G F + + + + GSGC+AALDA+RYL
Sbjct: 298 SSLTSVPGFFAAGDVQDSRY-RQAVTSAGSGCIAALDAERYL 338
>sp|Q6GIM7|TRXB_STAAR Thioredoxin reductase OS=Staphylococcus aureus (strain MRSA252)
GN=trxB PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 35/160 (21%)
Query: 20 VIGGGNTAVEEALYLSNIAKKVTLIHRNEKLRCEKILIDRLMQKVNEGKIDIKLKHIVHK 79
VIGGG++AVEE +L+ A KVT++HR ++LR ++IL DR + KID H +
Sbjct: 149 VIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKN---DKIDFIWSHTLKS 205
Query: 80 I------IGNNTVT----GQLEMN--DG---YIKTK----------LNKKTGY------T 108
I +G+ T+T G E + DG YI K + GY
Sbjct: 206 INEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDM 265
Query: 109 STNISGVFCRWRCTRLYFIDKQLLALGSGCMAALDAQRYL 148
+T+ G+F R + + + A G G +AA A Y+
Sbjct: 266 TTSAPGIFAAGDV-RDKGLRQIVTATGDGSIAAQSAAEYI 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,552,721
Number of Sequences: 539616
Number of extensions: 2024046
Number of successful extensions: 6272
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 5903
Number of HSP's gapped (non-prelim): 373
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)