BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy524
         (111 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P13390|VLTF_BPT5 L-shaped tail fiber protein OS=Enterobacteria phage T5 GN=ltf PE=4
           SV=3
          Length = 1396

 Score = 30.0 bits (66), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 43  KKSETNEKEPKESLVSKLNEEIEMLSQQKTQLTHHIFMVATENKQLWTKLSMLTE 97
           K SETN K  +    +K  E ++M S+  + +T + + V T N  ++ K++ LT+
Sbjct: 191 KTSETNAKTSE----NKAKEYLDMASELVSPVTQYDWPVGTNNNSVYVKIAKLTD 241


>sp|Q9SLN1|FPP7_ARATH Filament-like plant protein 7 OS=Arabidopsis thaliana GN=FPP7 PE=3
           SV=2
          Length = 898

 Score = 29.3 bits (64), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 27  RLSNLEEENLKLRIDKKKSETNEKEPKESLVSKLNEEIEMLSQQKTQLTHHIFMVATEN- 85
           +++ LE E  +LR+  +K     + P  + +SK++ E+EML +++   + H  M+ +E  
Sbjct: 235 KVAKLESECQRLRVLVRK-----RLPGPAALSKMSNEVEMLGRRRVNGSPHSPMIDSEKI 289

Query: 86  KQLWTKLSMLTEETNVPEQSIN 107
             L  +L +L EE     +++N
Sbjct: 290 NNLTEQLCLLEEENKTLREALN 311


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.308    0.122    0.317 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,131,234
Number of Sequences: 539616
Number of extensions: 1044824
Number of successful extensions: 8829
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 307
Number of HSP's that attempted gapping in prelim test: 8340
Number of HSP's gapped (non-prelim): 790
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)