BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5240
(97 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q11118|WOS2_SCHPO Protein wos2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=wos2 PE=2 SV=1
Length = 186
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 2 TQIPPVIWAQRKDK-------ILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIK 54
TQIP V+WAQR +K I +T + + +PKI++ P+++ D+ S HY + I
Sbjct: 5 TQIPEVLWAQRSNKDDAEKNVIYLTVLIPDAVDPKINLTPEKLVIDSKSGANAHYAVQID 64
Query: 55 LFKSINAEKSIKTNKDRHIELVLKKLEEDVVFWPHLT 91
FK I+ EKS + R+I VL K E FWP LT
Sbjct: 65 FFKDIDVEKSKYSVTGRYIFFVLYKKELQEEFWPRLT 101
>sp|P28707|SBA1_YEAST Co-chaperone protein SBA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SBA1 PE=1 SV=3
Length = 216
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 5 PPVIWAQR-------KDKILITFCVENCNNPKIDIEPDEIKFDAVS----ADKK--HYKL 51
P V WAQR ++ +LIT + +C+ P++ I+P I+ A S D+ HY+L
Sbjct: 8 PQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPSYIELKAQSKPHVGDENVHHYQL 67
Query: 52 DIKLFKSINAEKSI-KTNKDRHIELVLKKLEEDVVFWPHLT 91
I L+K I EK++ K +H L L K + + +WP LT
Sbjct: 68 HIDLYKEIIPEKTMHKVANGQHYFLKLYKKDLESEYWPRLT 108
>sp|Q5NVM4|TEBP_PONAB Prostaglandin E synthase 3 OS=Pongo abelii GN=PTGES3 PE=2 SV=1
Length = 160
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 3 QIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKL-DIKLFKSINA 61
Q W R+D + I FCVE+ + ++ E ++ F + L +I LF I+
Sbjct: 2 QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLT 91
S DR I L+K E WP LT
Sbjct: 62 NDSKHKRTDRSILCCLRKGESGQS-WPRLT 90
>sp|Q6PWL5|TEBP_MACFA Prostaglandin E synthase 3 OS=Macaca fascicularis GN=PTGES3 PE=1
SV=1
Length = 160
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 3 QIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKL-DIKLFKSINA 61
Q W R+D + I FCVE+ + ++ E ++ F + L +I LF I+
Sbjct: 2 QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLT 91
S DR I L+K E WP LT
Sbjct: 62 NDSKHKRTDRSILCCLRKGESGQS-WPRLT 90
>sp|Q15185|TEBP_HUMAN Prostaglandin E synthase 3 OS=Homo sapiens GN=PTGES3 PE=1 SV=1
Length = 160
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 3 QIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKL-DIKLFKSINA 61
Q W R+D + I FCVE+ + ++ E ++ F + L +I LF I+
Sbjct: 2 QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLT 91
S DR I L+K E WP LT
Sbjct: 62 NDSKHKRTDRSILCCLRKGESGQS-WPRLT 90
>sp|Q3ZBF7|TEBP_BOVIN Prostaglandin E synthase 3 OS=Bos taurus GN=PTGES3 PE=1 SV=1
Length = 160
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 3 QIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKL-DIKLFKSINA 61
Q W R+D + I FCVE+ + ++ E ++ F + L +I LF I+
Sbjct: 2 QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLT 91
S DR I L+K E WP LT
Sbjct: 62 NDSKHKRTDRSILCCLRKGESGQS-WPRLT 90
>sp|P83868|TEBP_RAT Prostaglandin E synthase 3 OS=Rattus norvegicus GN=Ptges3 PE=1
SV=2
Length = 160
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 3 QIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKL-DIKLFKSINA 61
Q W R+D + I FCVE+ + ++ E ++ F + L +I LF I+
Sbjct: 2 QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLT 91
S DR I L+K E WP LT
Sbjct: 62 NDSKHKRTDRSILCCLRKGESGQS-WPRLT 90
>sp|Q9R0Q7|TEBP_MOUSE Prostaglandin E synthase 3 OS=Mus musculus GN=Ptges3 PE=1 SV=1
Length = 160
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 3 QIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKL-DIKLFKSINA 61
Q W R+D + I FCVE+ + ++ E ++ F + L +I LF I+
Sbjct: 2 QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLT 91
S DR I L+K E WP LT
Sbjct: 62 NDSKHKRTDRSILCCLRKGESGQS-WPRLT 90
>sp|P0C8Z0|Y8359_ORYSI Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica
GN=OsI_027940 PE=1 SV=2
Length = 210
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 1 MTQIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEI-KFDAVSA-DKKHYKLDIKLFKS 58
M++ P V WAQR DK+ IT + + + K+++EP+ + F A + D Y+ ++L
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 59 INAEKSIKTNKDRHIELVLKKLE 81
+N E+S + R I +++K E
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAE 83
>sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp.
japonica GN=Os08g0359500 PE=2 SV=1
Length = 213
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 1 MTQIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEI-KFDAVSA-DKKHYKLDIKLFKS 58
M++ P V WAQR DK+ IT + + + K+++EP+ + F A + D Y+ ++L
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 59 INAEKSIKTNKDRHIELVLKKLE 81
+N E+S + R I +++K E
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAE 83
>sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabidopsis thaliana
GN=At3g03773 PE=1 SV=1
Length = 150
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 MTQIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEI-KFDAVSADKKHYKLDIKLFKSI 59
M++ P V+WAQR DK+ +T + + + + EP + F A+ A + ++ ++L+ I
Sbjct: 1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKI 60
Query: 60 NAE 62
E
Sbjct: 61 MTE 63
>sp|Q9D9A7|PTG3L_MOUSE Putative protein PTGES3L OS=Mus musculus GN=Ptges3l PE=2 SV=1
Length = 131
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 3 QIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAE 62
Q +W R + + FCVE+ + + IE + F + D +I+ + +N++
Sbjct: 4 QPARTLWYDRPKYVFMEFCVEDSTDVSVLIEDHRVVFSCRNGDGVELYNEIEFYAKVNSK 63
Query: 63 KSIKTNKDRHIELVLKKLEEDVVFWPHLT 91
S R I ++K +E V WP LT
Sbjct: 64 DSQDKRSGRSITCFVRKWKEKVA-WPRLT 91
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 5 PPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKK---HYKLDIKLFKSINA 61
P V WAQR +I + + + + I +E + ++F K Y+ ++ K +
Sbjct: 6 PHVYWAQRHGEIYLRVEISDAQDLSIGVEENILQFRGQGHGAKGENEYEFSLEFLKPVKP 65
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLTSTTR 95
E K+ + R + + ++K EE V+W LT +
Sbjct: 66 EVKHKSTQ-RQVNITVRKQEE--VWWNRLTKQEK 96
>sp|Q23280|YOCA_CAEEL Uncharacterized protein ZC395.10 OS=Caenorhabditis elegans
GN=ZC395.10 PE=3 SV=1
Length = 175
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 1 MTQIPPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSIN 60
M + P V+WAQR+ + +T V+ ++ E +++ F S K Y+ ++ F I+
Sbjct: 1 MAKQPTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHFQGSSKTDK-YEATLEFFDEID 59
Query: 61 AEKSIKTNKD-RHIELVLKKLEEDVVFWPHL 90
T R +E+ ++K + +WP L
Sbjct: 60 PASVKHTGSSTRVVEITVQK--KTPAWWPRL 88
>sp|Q9VH95|YC17_DROME Uncharacterized protein CG16817 OS=Drosophila melanogaster
GN=CG16817 PE=1 SV=1
Length = 184
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 5 PPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSA--DKKHYKLDIKLFKSINAE 62
PPV WAQR D I + VE C + + + F V+ K Y++ + ++ E
Sbjct: 10 PPVSWAQRNDLIYVIIDVE-CKDIEHKVTEKTFTFKGVNVLDPSKKYEVTLNFLHEVDPE 68
Query: 63 KSIKTNKDRHIELVLKKLEEDVVFWPHLTS 92
K N R +E + K + +W LT+
Sbjct: 69 KVTSKNIGRCLEFTIPK-KAAGPYWSSLTT 97
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 5 PPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKH---YKLDIKLFKSINA 61
P V WAQR ++ + + + NP I I + + F A K Y+ ++ +
Sbjct: 8 PHVYWAQRHHELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKP 67
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLTSTTR 95
E K + R + + ++K E +W LT +
Sbjct: 68 EPVYKLTQ-RQVNITVQKKESQ--WWERLTKQEK 98
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 5 PPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKH---YKLDIKLFKSINA 61
P V WAQR ++ + + + NP + I + ++F A K Y+ I+ + +
Sbjct: 8 PHVHWAQRHRELYLRVELSDVKNPDVSIADNVLRFRAQGHGAKGDNIYEFQIEFLEPVEP 67
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLTSTTR 95
+ + + R + + ++K E +W LT +
Sbjct: 68 KPVCRVTQ-RQLNITVQKKESS--WWERLTKQEK 98
>sp|E9PB15|PTG3L_HUMAN Putative protein PTGES3L OS=Homo sapiens GN=PTGES3L PE=5 SV=1
Length = 166
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 7 VIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINA 61
+W R + + FCVE+ + + IE I F +AD +I+ + +N+
Sbjct: 51 TLWYDRPRYVFMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNS 105
>sp|Q5KWJ8|TIG_GEOKA Trigger factor OS=Geobacillus kaustophilus (strain HTA426) GN=tig
PE=3 SV=1
Length = 428
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 22 VENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKL--FKSINAEKSIKTNKDRHIELVLKK 79
+E + P+IDIE E + K K ++KL +K + EK T D +E LK+
Sbjct: 85 IEPVSMPEIDIEQMEKGKSLIFKAKVTVKPEVKLGQYKGLEVEKMDTTVTDEDVENELKR 144
Query: 80 LEED 83
L+ED
Sbjct: 145 LQED 148
>sp|C5D5L5|TIG_GEOSW Trigger factor OS=Geobacillus sp. (strain WCH70) GN=tig PE=3 SV=1
Length = 428
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 22 VENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKL--FKSINAEKSIKTNKDRHIELVLKK 79
+E + PKIDIE E + K K ++KL +K + EK T D +E LK+
Sbjct: 85 IEPVDVPKIDIEQMEKGKSLIFTAKVTVKPEVKLGQYKGLEVEKMDDTVTDEDVENELKR 144
Query: 80 LEED 83
L+E+
Sbjct: 145 LQEN 148
>sp|C3KU96|GATB_CLOB6 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Clostridium botulinum (strain 657 / Type Ba4) GN=gatB
PE=3 SV=1
Length = 476
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 9 WAQRKDKILITFCVENCNNPKIDIEPD-EIKFDAVSADKKHYKLDIKLFKSINA-EKSIK 66
+ ++ IL + V +C + + D I V ++K + +IK S A EK++
Sbjct: 167 YLEKLKSILSSIEVSDCKMEQGSLRCDGNISVRPVGSEKFGVRSEIKNMNSFKALEKALS 226
Query: 67 TNKDRHIELVLKK--LEEDVVFWPHLTSTT 94
DRH+E V K LE++ W S T
Sbjct: 227 YEYDRHVEAVTKGEILEQETRRWDEANSVT 256
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 5 PPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVSADKKH---YKLDIKLFKSINA 61
P V WAQR ++ + + + NP I I + + F A K Y+ ++ +
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKP 67
Query: 62 EKSIKTNKDRHIELVLKKLEEDVVFWPHLTSTTR 95
E K + + V KK+ + +W LT +
Sbjct: 68 EPVYKLTQRQVNITVQKKVSQ---WWERLTKQEK 98
>sp|A9QYU7|Y2394_YERPG UPF0260 protein YpAngola_A2394 OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=YpAngola_A2394 PE=3 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
>sp|B2K3P3|Y2126_YERPB UPF0260 protein YPTS_2126 OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=YPTS_2126 PE=3 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
>sp|B1JLI4|Y2117_YERPY UPF0260 protein YPK_2117 OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=YPK_2117 PE=3 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
>sp|Q8ZES0|Y2083_YERPE UPF0260 protein YPO2083/y2228/YP_1926 OS=Yersinia pestis
GN=YPO2083 PE=3 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
>sp|Q66AR5|Y2065_YERPS UPF0260 protein YPTB2065 OS=Yersinia pseudotuberculosis serotype
I (strain IP32953) GN=YPTB2065 PE=3 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
>sp|A7FIA1|Y2006_YERP3 UPF0260 protein YpsIP31758_2006 OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=YpsIP31758_2006 PE=3
SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
>sp|Q1CJE1|Y1559_YERPN UPF0260 protein YPN_1559 OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=YPN_1559 PE=3 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
>sp|Q1C7Z0|Y1465_YERPA UPF0260 protein YPA_1465 OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=YPA_1465 PE=3 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
>sp|A4TJH7|Y1039_YERPP UPF0260 protein YPDSF_1039 OS=Yersinia pestis (strain Pestoides
F) GN=YPDSF_1039 PE=3 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LITFCVENCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76
L C + C N ID + DEI F V+ D +L+IK + N E+ + +D
Sbjct: 23 LCDGCGQCCLNKLIDEDTDEIYFTNVACD----QLNIKTCQCSNYERRFELEED-----C 73
Query: 77 LKKLEEDVVFWPHLTSTTRF 96
+K E++V + L T +
Sbjct: 74 IKLTRENLVTFAWLPPTCAY 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,722,108
Number of Sequences: 539616
Number of extensions: 1248993
Number of successful extensions: 3635
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3604
Number of HSP's gapped (non-prelim): 53
length of query: 97
length of database: 191,569,459
effective HSP length: 66
effective length of query: 31
effective length of database: 155,954,803
effective search space: 4834598893
effective search space used: 4834598893
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)