Query psy5240
Match_columns 97
No_of_seqs 121 out of 881
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 21:19:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kmw_A Uncharacterized protein 100.0 1E-29 3.5E-34 166.6 8.6 91 1-94 1-92 (150)
2 1ejf_A Progesterone receptor P 100.0 1.7E-28 5.7E-33 156.3 10.2 89 5-94 4-93 (125)
3 2cg9_X CO-chaperone protein SB 100.0 4.1E-29 1.4E-33 161.0 5.0 94 1-94 3-110 (134)
4 2xcm_C SGT1-like protein, cyto 99.9 2.1E-27 7.3E-32 143.2 9.8 89 4-94 2-92 (92)
5 1rl1_A Suppressor of G2 allele 99.9 2.2E-26 7.6E-31 143.9 10.2 92 1-94 4-99 (114)
6 2o30_A Nuclear movement protei 99.9 2.6E-26 9E-31 147.2 10.4 88 1-94 1-91 (131)
7 1x5m_A Calcyclin-binding prote 99.9 4.2E-26 1.4E-30 145.5 10.7 90 4-94 20-115 (127)
8 1wgv_A KIAA1068 protein; CS do 99.9 9.9E-26 3.4E-30 143.2 10.8 90 3-94 18-112 (124)
9 1wh0_A Ubiquitin carboxyl-term 99.9 1.6E-25 5.4E-30 144.3 11.3 89 4-94 19-122 (134)
10 1wfi_A Nuclear distribution ge 99.9 3.2E-24 1.1E-28 137.3 9.0 88 3-94 6-99 (131)
11 3qor_A Nuclear migration prote 99.9 5E-24 1.7E-28 135.0 9.7 88 3-94 15-108 (121)
12 2rh0_A NUDC domain-containing 99.9 3.2E-23 1.1E-27 136.5 10.1 87 3-94 12-104 (157)
13 2k8q_A Protein SHQ1; beta-sand 98.9 5.7E-09 1.9E-13 66.7 7.4 83 3-91 2-91 (134)
14 3eud_A Protein SHQ1; CS domain 98.9 6.9E-08 2.3E-12 60.0 12.0 83 3-91 16-105 (115)
15 3gla_A Low molecular weight he 98.7 6.4E-07 2.2E-11 53.9 12.2 80 2-81 2-98 (100)
16 4fei_A Heat shock protein-rela 98.6 1.3E-06 4.4E-11 52.9 11.8 79 3-81 5-95 (102)
17 3aab_A Putative uncharacterize 98.6 2.4E-06 8.3E-11 53.3 11.6 78 4-81 24-116 (123)
18 4eld_A MJ16.5-P1, small heat s 98.4 1.4E-05 4.7E-10 52.0 11.7 75 7-81 59-151 (161)
19 1gme_A Heat shock protein 16.9 98.3 1.7E-05 5.9E-10 51.2 10.3 78 4-81 43-138 (151)
20 2wj5_A Heat shock protein beta 98.0 4.8E-05 1.6E-09 45.9 8.1 76 6-81 3-89 (101)
21 3l1e_A Alpha-crystallin A chai 97.9 0.00041 1.4E-08 42.1 11.1 77 5-81 3-90 (106)
22 3q9p_A Heat shock protein beta 97.9 0.00029 9.8E-09 41.1 9.5 71 10-80 3-84 (85)
23 2y1y_A Alpha-crystallin B chai 97.7 0.00037 1.3E-08 41.0 8.5 71 11-81 3-84 (90)
24 2klr_A Alpha-crystallin B chai 97.5 0.00086 2.9E-08 44.3 8.5 75 7-81 66-151 (175)
25 2bol_A TSP36, small heat shock 97.3 0.002 6.9E-08 46.1 9.0 78 4-81 98-189 (314)
26 2bol_A TSP36, small heat shock 95.1 0.19 6.7E-06 35.8 8.8 68 13-80 232-313 (314)
27 4eld_A MJ16.5-P1, small heat s 37.6 72 0.0025 19.7 5.2 35 46-81 65-99 (161)
28 3shs_A HOC head outer capsid p 24.2 1.1E+02 0.0037 21.7 4.2 69 6-74 225-299 (304)
No 1
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.96 E-value=1e-29 Score=166.56 Aligned_cols=91 Identities=25% Similarity=0.489 Sum_probs=85.6
Q ss_pred CCCCCcEEEEecCCeEEEEEEecCCCCCcEEEe-cCEEEEEEEcCCCceEEEEeeccccccccCceEEeeCCeEEEEEEe
Q psy5240 1 MTQIPPVIWAQRKDKILITFCVENCNNPKIDIE-PDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELVLKK 79 (97)
Q Consensus 1 m~~~p~~~W~Qt~~~V~i~i~~~~~~~~~v~~~-~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~s~~~v~~~~iei~L~K 79 (97)
|+++|.|.||||.+.|+|+|+++++++++|+|+ +++|+|++.+.+++.|.++++||++|+|+ |++++.+++|+|+|+|
T Consensus 1 m~~~P~~~W~Qt~~~V~ltI~l~~~~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K 79 (150)
T 2kmw_A 1 SSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQK 79 (150)
T ss_dssp CEECCCEEEEECSSEEEEEECCSSEEEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEEE
T ss_pred CCcCCcEEEEeCCCEEEEEEEeCCCCceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEEE
Confidence 899999999999999999999999999999999 78999999865567899999999999999 9999999999999999
Q ss_pred cCCCCCcccCccccc
Q psy5240 80 LEEDVVFWPHLTSTT 94 (97)
Q Consensus 80 ~~~~~~~W~~L~k~~ 94 (97)
++ +.+|+||++++
T Consensus 80 ~e--~~~W~rL~k~~ 92 (150)
T 2kmw_A 80 EE--RSWWTRLLKSE 92 (150)
T ss_dssp CC--SSCCSCSBSCC
T ss_pred CC--CCcCcccccCC
Confidence 99 68999999874
No 2
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.96 E-value=1.7e-28 Score=156.35 Aligned_cols=89 Identities=29% Similarity=0.558 Sum_probs=82.9
Q ss_pred CcEEEEecCCeEEEEEEecCCCCCcEEEecCEEEEEEEc-CCCceEEEEeeccccccccCceEEeeCCeEEEEEEecCCC
Q psy5240 5 PPVIWAQRKDKILITFCVENCNNPKIDIEPDEIKFDAVS-ADKKHYKLDIKLFKSINAEKSIKTNKDRHIELVLKKLEED 83 (97)
Q Consensus 5 p~~~W~Qt~~~V~i~i~~~~~~~~~v~~~~~~l~~~~~~-~~~~~y~~~l~L~~~I~~e~s~~~v~~~~iei~L~K~~~~ 83 (97)
|+|.||||.+.|+|+|++++++++.|+|++++|+|++.+ .+++.|.++++||++|+|++|+|++.+++|+|+|+|++ +
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~-~ 82 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGE-S 82 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTEEEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESS-T
T ss_pred CceeEEeCCCEEEEEEEecCCCceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEECC-C
Confidence 499999999999999999999999999999999999986 45678999999999999999999999999999999998 3
Q ss_pred CCcccCccccc
Q psy5240 84 VVFWPHLTSTT 94 (97)
Q Consensus 84 ~~~W~~L~k~~ 94 (97)
+.+|+||++++
T Consensus 83 ~~~W~rL~~~~ 93 (125)
T 1ejf_A 83 GQSWPRLTKER 93 (125)
T ss_dssp TCCCSSSBSSC
T ss_pred CCCCCceecCC
Confidence 67999999875
No 3
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.1e-29 Score=160.95 Aligned_cols=94 Identities=34% Similarity=0.624 Sum_probs=77.5
Q ss_pred CCCCCcEEEEecCCe-------EEEEEEecCCCCCcEEEecCEEEEEEEcCC------CceEEEEeeccccccccCceEE
Q psy5240 1 MTQIPPVIWAQRKDK-------ILITFCVENCNNPKIDIEPDEIKFDAVSAD------KKHYKLDIKLFKSINAEKSIKT 67 (97)
Q Consensus 1 m~~~p~~~W~Qt~~~-------V~i~i~~~~~~~~~v~~~~~~l~~~~~~~~------~~~y~~~l~L~~~I~~e~s~~~ 67 (97)
|+++|.|.||||.+. |+|+|++++++++.|+|++++|+|++.+++ ++.|.++++||++|+|++|+++
T Consensus 3 ~~~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~ 82 (134)
T 2cg9_X 3 KVINPQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHK 82 (134)
T ss_dssp --------CBCCCEEECCCSSEEEEECCCSSEESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEE
T ss_pred cccCCCEEEEeCCCCcCCcCCEEEEEEEecCCCceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEE
Confidence 678999999999988 999999999999999999999999987732 4789999999999999999999
Q ss_pred eeCCe-EEEEEEecCCCCCcccCccccc
Q psy5240 68 NKDRH-IELVLKKLEEDVVFWPHLTSTT 94 (97)
Q Consensus 68 v~~~~-iei~L~K~~~~~~~W~~L~k~~ 94 (97)
+.+++ |+|+|+|+++++.+|+||++++
T Consensus 83 v~~~~~vei~L~K~~~~~~~W~rL~k~~ 110 (134)
T 2cg9_X 83 VANGQHYFLKLYKKDLESEYWPRLTKEK 110 (134)
T ss_dssp ECCC--CEEEEEECSSSSCCCSCSSSSC
T ss_pred ECCCEEEEEEEEECCCCCCCCCceecCC
Confidence 99999 9999999983368999999875
No 4
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.95 E-value=2.1e-27 Score=143.17 Aligned_cols=89 Identities=19% Similarity=0.294 Sum_probs=81.6
Q ss_pred CCcEEEEecCCeEEEEEEecCC--CCCcEEEecCEEEEEEEcCCCceEEEEeeccccccccCceEEeeCCeEEEEEEecC
Q psy5240 4 IPPVIWAQRKDKILITFCVENC--NNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELVLKKLE 81 (97)
Q Consensus 4 ~p~~~W~Qt~~~V~i~i~~~~~--~~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~s~~~v~~~~iei~L~K~~ 81 (97)
.|+|+|+||.+.|+|+|+++++ +++.|+|++++|+|++.+++++.|.++++||++|+|++|+|++.+++|+|+|+|++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 4899999999999999999985 58999999999999998655678999999999999999999999999999999999
Q ss_pred CCCCcccCccccc
Q psy5240 82 EDVVFWPHLTSTT 94 (97)
Q Consensus 82 ~~~~~W~~L~k~~ 94 (97)
..+|++|++++
T Consensus 82 --~~~W~~L~~~k 92 (92)
T 2xcm_C 82 --IITWASLEHGK 92 (92)
T ss_dssp --SCCCSCSBTTC
T ss_pred --CCcchhcccCC
Confidence 45999999764
No 5
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.94 E-value=2.2e-26 Score=143.90 Aligned_cols=92 Identities=25% Similarity=0.389 Sum_probs=80.5
Q ss_pred CCCC--CcEEEEecCCeEEEEEEecCCC--CCcEEEecCEEEEEEEcCCCceEEEEeeccccccccCceEEeeCCeEEEE
Q psy5240 1 MTQI--PPVIWAQRKDKILITFCVENCN--NPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELV 76 (97)
Q Consensus 1 m~~~--p~~~W~Qt~~~V~i~i~~~~~~--~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~s~~~v~~~~iei~ 76 (97)
|+++ |+|+|+||.+.|+|+|+++++. ++.|+|++++|.|++.+.+++.|.++++||++|+|++|+|++.+++|+|+
T Consensus 4 m~~~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~ 83 (114)
T 1rl1_A 4 MTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIK 83 (114)
T ss_dssp ----CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEEE
T ss_pred CCCCCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEEE
Confidence 6656 4699999999999999999874 89999999999999986556789999999999999999999999999999
Q ss_pred EEecCCCCCcccCccccc
Q psy5240 77 LKKLEEDVVFWPHLTSTT 94 (97)
Q Consensus 77 L~K~~~~~~~W~~L~k~~ 94 (97)
|+|++ ..+|++|++++
T Consensus 84 L~K~~--~~~W~~L~~~~ 99 (114)
T 1rl1_A 84 LKKPE--AVRWEKLEGQG 99 (114)
T ss_dssp EECSS--CCCCSSSBTTC
T ss_pred EEcCC--CCcCccccccC
Confidence 99999 46999999764
No 6
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.94 E-value=2.6e-26 Score=147.17 Aligned_cols=88 Identities=17% Similarity=0.247 Sum_probs=76.4
Q ss_pred CCCCCcEEEEecCCeEEEEEEec---CCCCCcEEEecCEEEEEEEcCCCceEEEEeeccccccccCceEEeeCCeEEEEE
Q psy5240 1 MTQIPPVIWAQRKDKILITFCVE---NCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRHIELVL 77 (97)
Q Consensus 1 m~~~p~~~W~Qt~~~V~i~i~~~---~~~~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~s~~~v~~~~iei~L 77 (97)
|+.+|.|.|+||.+.|+|+|+++ +++++.|+|++++|.|++.| .. .++++||++|+|++|+|++.+++|+|+|
T Consensus 1 m~~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g---~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L 76 (131)
T 2o30_A 1 MPSEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQG---EI-VIDGELLHEVDVSSLWWVINGDVVDVNV 76 (131)
T ss_dssp ----CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETT---EE-EEEEEBSSCEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECC---Ee-eEccccccccccccCEEEEeCCEEEEEE
Confidence 89999999999999999999997 35799999999999999865 45 7999999999999999999999999999
Q ss_pred EecCCCCCcccCccccc
Q psy5240 78 KKLEEDVVFWPHLTSTT 94 (97)
Q Consensus 78 ~K~~~~~~~W~~L~k~~ 94 (97)
+|+. +.||++|++++
T Consensus 77 ~K~~--~~~W~~L~~~~ 91 (131)
T 2o30_A 77 TKKR--NEWWDSLLVGS 91 (131)
T ss_dssp EESS--CCCCSCSBC--
T ss_pred EECC--CCCCccccCCC
Confidence 9997 78999999775
No 7
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=4.2e-26 Score=145.50 Aligned_cols=90 Identities=20% Similarity=0.298 Sum_probs=81.3
Q ss_pred CCcEEEEecCCeEEEEEEecCC-----CCCcEEEecCEEEEEEEcCCCceEEEEee-ccccccccCceEEeeCCeEEEEE
Q psy5240 4 IPPVIWAQRKDKILITFCVENC-----NNPKIDIEPDEIKFDAVSADKKHYKLDIK-LFKSINAEKSIKTNKDRHIELVL 77 (97)
Q Consensus 4 ~p~~~W~Qt~~~V~i~i~~~~~-----~~~~v~~~~~~l~~~~~~~~~~~y~~~l~-L~~~I~~e~s~~~v~~~~iei~L 77 (97)
.++|.|+||.+.|+|+|+++++ +++.|+|++++|.|.+.+.+++.|.++++ ||++|+|++|+|++.+++|+|+|
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~L 99 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILC 99 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEEE
Confidence 3689999999999999999987 58999999999999998655678999996 99999999999999999999999
Q ss_pred EecCCCCCcccCccccc
Q psy5240 78 KKLEEDVVFWPHLTSTT 94 (97)
Q Consensus 78 ~K~~~~~~~W~~L~k~~ 94 (97)
+|++ ++.+|++|++++
T Consensus 100 ~K~~-~~~~W~~L~~~~ 115 (127)
T 1x5m_A 100 RKKV-ENTRWDYLTQVE 115 (127)
T ss_dssp ECSS-SSCCCSSSBHHH
T ss_pred EECC-CCCCCCcccccc
Confidence 9999 356999998653
No 8
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.93 E-value=9.9e-26 Score=143.24 Aligned_cols=90 Identities=14% Similarity=0.245 Sum_probs=80.8
Q ss_pred CCCcEEEEecCCeEEEEEEec----CCCCCcEEEecCEEEEEEEcCCCceEEEEeeccccccccCceEEeeCCe-EEEEE
Q psy5240 3 QIPPVIWAQRKDKILITFCVE----NCNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRH-IELVL 77 (97)
Q Consensus 3 ~~p~~~W~Qt~~~V~i~i~~~----~~~~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~s~~~v~~~~-iei~L 77 (97)
.+|.|.|+||.++|+|+|+++ +++++.|+|++++|.|.+.+..+..|.++++||++|+|++|+|++.+++ |+|+|
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L 97 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNL 97 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEE
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEE
Confidence 468999999999999999999 4579999999999999997644456889999999999999999999876 99999
Q ss_pred EecCCCCCcccCccccc
Q psy5240 78 KKLEEDVVFWPHLTSTT 94 (97)
Q Consensus 78 ~K~~~~~~~W~~L~k~~ 94 (97)
+|++ +.+|++|++++
T Consensus 98 ~K~~--~~~W~~L~~~~ 112 (124)
T 1wgv_A 98 SKVG--EYWWNAILEGE 112 (124)
T ss_dssp CBSS--SCCCSCSBTTS
T ss_pred EECC--CCCCcCcccCC
Confidence 9998 68999999775
No 9
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.93 E-value=1.6e-25 Score=144.26 Aligned_cols=89 Identities=13% Similarity=0.240 Sum_probs=81.2
Q ss_pred CCcEEEEec-CCeEEEEEEecCC--CCCcEEEecCEEEEEEEcCCC------------ceEEEEeeccccccccCceEEe
Q psy5240 4 IPPVIWAQR-KDKILITFCVENC--NNPKIDIEPDEIKFDAVSADK------------KHYKLDIKLFKSINAEKSIKTN 68 (97)
Q Consensus 4 ~p~~~W~Qt-~~~V~i~i~~~~~--~~~~v~~~~~~l~~~~~~~~~------------~~y~~~l~L~~~I~~e~s~~~v 68 (97)
.|+|+|+|| .+.|+|+|+++++ +++.|+|++++|.|.+.+.++ ..|.++++||++|+|++|+|++
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v 98 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCF 98 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEE
Confidence 589999999 9999999999987 699999999999999876432 2899999999999999999999
Q ss_pred eCCeEEEEEEecCCCCCcccCccccc
Q psy5240 69 KDRHIELVLKKLEEDVVFWPHLTSTT 94 (97)
Q Consensus 69 ~~~~iei~L~K~~~~~~~W~~L~k~~ 94 (97)
.+++|+|+|+|++ +.+|++|++..
T Consensus 99 ~~~kIeI~L~K~e--~~~W~~L~~~~ 122 (134)
T 1wh0_A 99 TASRIDICLRKRQ--SQRWGGLEAPA 122 (134)
T ss_dssp CSSEEEEEEEESS--SCCCSCSBCCC
T ss_pred eCCEEEEEEEECC--CCccccccccC
Confidence 9999999999998 78999999764
No 10
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.91 E-value=3.2e-24 Score=137.34 Aligned_cols=88 Identities=16% Similarity=0.300 Sum_probs=78.8
Q ss_pred CCCcEEEEecCCeEEEEEEecC-----CCCCcEEEecCEEEEEEEcCCCceEEEEeeccccccccCceEEeeCC-eEEEE
Q psy5240 3 QIPPVIWAQRKDKILITFCVEN-----CNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDR-HIELV 76 (97)
Q Consensus 3 ~~p~~~W~Qt~~~V~i~i~~~~-----~~~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~s~~~v~~~-~iei~ 76 (97)
.+|.|.|+||.++|+|+|++++ ++++.|+|++++|.|.+.| ..+.++++||++|+|++|+|++.++ .|+|+
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg---~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~ 82 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKG---QPPVVDGELYNEVKVEESSWLIEDGKVVTVH 82 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETT---SCCSBCSCBSSCBCSTTCEEEEETTTEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECC---ceEEEecccccccccccCEEEEcCCCEEEEE
Confidence 4789999999999999999995 3699999999999999875 4567999999999999999999986 69999
Q ss_pred EEecCCCCCcccCccccc
Q psy5240 77 LKKLEEDVVFWPHLTSTT 94 (97)
Q Consensus 77 L~K~~~~~~~W~~L~k~~ 94 (97)
|+|++ ++.||++|++++
T Consensus 83 L~K~~-~~~~W~~L~~~~ 99 (131)
T 1wfi_A 83 LEKIN-KMEWWNRLVTSD 99 (131)
T ss_dssp EEBSS-SCCCCSCSBSSC
T ss_pred EEECC-CCCCChhhhcCC
Confidence 99998 357999999765
No 11
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.91 E-value=5e-24 Score=135.01 Aligned_cols=88 Identities=17% Similarity=0.327 Sum_probs=78.7
Q ss_pred CCCcEEEEecCCeEEEEEEecC-----CCCCcEEEecCEEEEEEEcCCCceEEEEeeccccccccCceEEeeC-CeEEEE
Q psy5240 3 QIPPVIWAQRKDKILITFCVEN-----CNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKD-RHIELV 76 (97)
Q Consensus 3 ~~p~~~W~Qt~~~V~i~i~~~~-----~~~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~s~~~v~~-~~iei~ 76 (97)
..|.|.|+||.++|+|+|+++. ++++.|+|++++|+|.+.+ ..|.++++||++|++++|+|++.+ +.|+|+
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg---~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~ 91 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG---QPAIIDGELYNEVKVEESSWLIADGAVVTVH 91 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT---SCCSEEEEBSSCBCGGGCEEEEETTTEEEEE
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC---cceEEeccccccccccccEEEEcCCCEEEEE
Confidence 4688999999999999999984 3589999999999999875 467899999999999999999987 599999
Q ss_pred EEecCCCCCcccCccccc
Q psy5240 77 LKKLEEDVVFWPHLTSTT 94 (97)
Q Consensus 77 L~K~~~~~~~W~~L~k~~ 94 (97)
|.|++ ++.||++|++++
T Consensus 92 L~K~~-~~~~W~~L~~~~ 108 (121)
T 3qor_A 92 LEKIN-KMEWWSRLVSSD 108 (121)
T ss_dssp EEBSS-SSCCCSCSBTTS
T ss_pred EEECC-CCCCChhhhcCC
Confidence 99998 468999999775
No 12
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.90 E-value=3.2e-23 Score=136.49 Aligned_cols=87 Identities=22% Similarity=0.341 Sum_probs=78.2
Q ss_pred CCCcEEEEecCCeEEEEEEecC---CCCCcEEEecCEEEEEEEcCCCceEEEEeeccccccccCceEEeeCCe-EEEEEE
Q psy5240 3 QIPPVIWAQRKDKILITFCVEN---CNNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEKSIKTNKDRH-IELVLK 78 (97)
Q Consensus 3 ~~p~~~W~Qt~~~V~i~i~~~~---~~~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~s~~~v~~~~-iei~L~ 78 (97)
.+|.|.|+||.+.|+|+|++++ ++++.|+|++++|.|.+.| .. .++++||++|+|++|+|++.+++ |+|+|+
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg---~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~ 87 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG---RE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLT 87 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT---EE-EEEEEBSSCBCGGGCEEEEECCCEEEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC---EE-EEeeccccccCccccEEEEcCCcEEEEEEE
Confidence 4689999999999999999985 4799999999999999875 44 59999999999999999999877 999999
Q ss_pred ecCCC--CCcccCccccc
Q psy5240 79 KLEED--VVFWPHLTSTT 94 (97)
Q Consensus 79 K~~~~--~~~W~~L~k~~ 94 (97)
|++ + +.||++|++++
T Consensus 88 K~~-~~~~~~W~~L~k~~ 104 (157)
T 2rh0_A 88 KTK-RDAANCWTSLLESE 104 (157)
T ss_dssp BSS-CSTTCCCSEEETTE
T ss_pred EcC-CCcCCcChhhhcCC
Confidence 998 4 58999999875
No 13
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.90 E-value=5.7e-09 Score=66.71 Aligned_cols=83 Identities=20% Similarity=0.343 Sum_probs=71.2
Q ss_pred CCCcEEEEecCCeEEEEEEecCCC----CCcEEEecCEEEEEEEcCCCceEEEEeeccccc-cccC--ceEEeeCCeEEE
Q psy5240 3 QIPPVIWAQRKDKILITFCVENCN----NPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSI-NAEK--SIKTNKDRHIEL 75 (97)
Q Consensus 3 ~~p~~~W~Qt~~~V~i~i~~~~~~----~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I-~~e~--s~~~v~~~~iei 75 (97)
++|+|.=.|+++.|+|.|.++.++ ++.+.++.+-+.|.+ ..|.|-|.|-++| +++. ++|......+.|
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~-----~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~V 76 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-----SPYYLRLRFPHELIDDERSTAQYDSKDECINV 76 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECS-----SSSCEEECCSSCEECCSSCEEEEETTTTEEEE
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEec-----CCeEEEecCCCeeecCCCcceeEeccCCEEEE
Confidence 379999999999999999999766 888999999999987 4799999999999 5554 445556799999
Q ss_pred EEEecCCCCCcccCcc
Q psy5240 76 VLKKLEEDVVFWPHLT 91 (97)
Q Consensus 76 ~L~K~~~~~~~W~~L~ 91 (97)
+|.|.+ +|+.++-|-
T Consensus 77 tLpK~~-~Ge~F~dLD 91 (134)
T 2k8q_A 77 KVAKLN-KNEYFEDLD 91 (134)
T ss_dssp EEEESS-TTCCCSSTT
T ss_pred EEeCCC-CCCCCCCcc
Confidence 999999 589998873
No 14
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.90 E-value=6.9e-08 Score=60.04 Aligned_cols=83 Identities=19% Similarity=0.304 Sum_probs=71.2
Q ss_pred CCCcEEEEecCCeEEEEEEecCC----CCCcEEEecCEEEEEEEcCCCceEEEEeeccccccccC---ceEEeeCCeEEE
Q psy5240 3 QIPPVIWAQRKDKILITFCVENC----NNPKIDIEPDEIKFDAVSADKKHYKLDIKLFKSINAEK---SIKTNKDRHIEL 75 (97)
Q Consensus 3 ~~p~~~W~Qt~~~V~i~i~~~~~----~~~~v~~~~~~l~~~~~~~~~~~y~~~l~L~~~I~~e~---s~~~v~~~~iei 75 (97)
++|.+.=.|+++.|+|.|.++.+ .++.+.++.+-+.|.+ .+|.|.|.|-++|..++ ++|......+.|
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~-----~PYyLRL~lP~~vved~~~~A~YD~d~g~~~v 90 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-----SPYYLRLRFPHELIDDERSTAQYDSKDECINV 90 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE-----TTEEEEEECSSCEECSTTCEEEEETTTTEEEE
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEec-----CCeEEEEecCcceecCCCcceEEeCCCcEEEE
Confidence 47999999999999999999964 3789999999999998 58999999999995543 367777899999
Q ss_pred EEEecCCCCCcccCcc
Q psy5240 76 VLKKLEEDVVFWPHLT 91 (97)
Q Consensus 76 ~L~K~~~~~~~W~~L~ 91 (97)
+|.|.+ +|+.-+-|-
T Consensus 91 ~lpK~~-~GE~F~dLD 105 (115)
T 3eud_A 91 KVAKLN-KNEYFEDLD 105 (115)
T ss_dssp EEEESS-TTCCCCCTT
T ss_pred EEcCCc-CCCcCCCcc
Confidence 999999 588887763
No 15
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.73 E-value=6.4e-07 Score=53.86 Aligned_cols=80 Identities=9% Similarity=0.147 Sum_probs=68.1
Q ss_pred CCCCcEEEEecCCeEEEEEEecCCC--CCcEEEecCEEEEEEEcCC---------------CceEEEEeeccccccccCc
Q psy5240 2 TQIPPVIWAQRKDKILITFCVENCN--NPKIDIEPDEIKFDAVSAD---------------KKHYKLDIKLFKSINAEKS 64 (97)
Q Consensus 2 ~~~p~~~W~Qt~~~V~i~i~~~~~~--~~~v~~~~~~l~~~~~~~~---------------~~~y~~~l~L~~~I~~e~s 64 (97)
+..|.++++++++.+.|.+.+++++ ++.|.++.+.|.+++.... ...|.-.+.|-..|+++..
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i 81 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGI 81 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSC
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHe
Confidence 3569999999999999999999874 8999999999999986411 1147778889999999999
Q ss_pred eEEeeCCeEEEEEEecC
Q psy5240 65 IKTNKDRHIELVLKKLE 81 (97)
Q Consensus 65 ~~~v~~~~iei~L~K~~ 81 (97)
+.++.++-+.|+|.|+.
T Consensus 82 ~A~~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 82 TAAGRNGVLEIRIPKRP 98 (100)
T ss_dssp EEEEETTEEEEEEEBC-
T ss_pred EEEEeCCEEEEEEecCC
Confidence 99999999999999976
No 16
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.65 E-value=1.3e-06 Score=52.93 Aligned_cols=79 Identities=6% Similarity=0.183 Sum_probs=68.5
Q ss_pred CCCcEEEEecCCeEEEEEEecCCC--CCcEEEecCEEEEEEEcCC----------CceEEEEeeccccccccCceEEeeC
Q psy5240 3 QIPPVIWAQRKDKILITFCVENCN--NPKIDIEPDEIKFDAVSAD----------KKHYKLDIKLFKSINAEKSIKTNKD 70 (97)
Q Consensus 3 ~~p~~~W~Qt~~~V~i~i~~~~~~--~~~v~~~~~~l~~~~~~~~----------~~~y~~~l~L~~~I~~e~s~~~v~~ 70 (97)
..|.++++++++.+.|.+.+++++ ++.|.++.+.|.+++.... ...|.-.+.|-..|+++..+.++.+
T Consensus 5 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~ 84 (102)
T 4fei_A 5 WTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAG 84 (102)
T ss_dssp CCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEET
T ss_pred ccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEEC
Confidence 469999999999999999999874 8999999999999876410 1157778899999999999999999
Q ss_pred CeEEEEEEecC
Q psy5240 71 RHIELVLKKLE 81 (97)
Q Consensus 71 ~~iei~L~K~~ 81 (97)
+-+.|+|.|+.
T Consensus 85 GvL~I~lpK~~ 95 (102)
T 4fei_A 85 GVLTVRFEKLR 95 (102)
T ss_dssp TEEEEEEEBSS
T ss_pred CEEEEEEEccC
Confidence 99999999987
No 17
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.56 E-value=2.4e-06 Score=53.27 Aligned_cols=78 Identities=12% Similarity=0.121 Sum_probs=67.5
Q ss_pred CCcEEEEecCCeEEEEEEecCCC--CCcEEEec-CEEEEEEEcCCC--c---------eEEEEeeccccccccCc-eEEe
Q psy5240 4 IPPVIWAQRKDKILITFCVENCN--NPKIDIEP-DEIKFDAVSADK--K---------HYKLDIKLFKSINAEKS-IKTN 68 (97)
Q Consensus 4 ~p~~~W~Qt~~~V~i~i~~~~~~--~~~v~~~~-~~l~~~~~~~~~--~---------~y~~~l~L~~~I~~e~s-~~~v 68 (97)
.|.++++++++.+.|.+.+++++ ++.|.++. +.|.+++..... . .|.-.+.|-..|+++.. +.+.
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~ 103 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY 103 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEE
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE
Confidence 48899999999999999999974 89999999 999999874211 1 56777889999999998 8889
Q ss_pred eCCeEEEEEEecC
Q psy5240 69 KDRHIELVLKKLE 81 (97)
Q Consensus 69 ~~~~iei~L~K~~ 81 (97)
.++-+.|+|.|..
T Consensus 104 ~~GvL~I~lPK~~ 116 (123)
T 3aab_A 104 ENGVLTIRIPIAG 116 (123)
T ss_dssp ETTEEEEEEEGGG
T ss_pred cCCEEEEEEEcCC
Confidence 9999999999976
No 18
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=98.35 E-value=1.4e-05 Score=51.97 Aligned_cols=75 Identities=15% Similarity=0.198 Sum_probs=65.3
Q ss_pred EEEEecCCeEEEEEEecCCC--CCcEEEecCEEEEEEEcCC----------------CceEEEEeeccccccccCceEEe
Q psy5240 7 VIWAQRKDKILITFCVENCN--NPKIDIEPDEIKFDAVSAD----------------KKHYKLDIKLFKSINAEKSIKTN 68 (97)
Q Consensus 7 ~~W~Qt~~~V~i~i~~~~~~--~~~v~~~~~~l~~~~~~~~----------------~~~y~~~l~L~~~I~~e~s~~~v 68 (97)
++++++++.+.|.+.+++++ ++.|+++.+.|.+++.... ...|.-.+.|-..|+++..+.+.
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 99999999999999999974 8999999999999886511 12566778899999999999999
Q ss_pred eCCeEEEEEEecC
Q psy5240 69 KDRHIELVLKKLE 81 (97)
Q Consensus 69 ~~~~iei~L~K~~ 81 (97)
.++-++|+|.|++
T Consensus 139 ~nGvL~I~lpK~~ 151 (161)
T 4eld_A 139 ENGVLSVILPKAE 151 (161)
T ss_dssp ETTEEEEEEEBCG
T ss_pred ECCEEEEEEEcCC
Confidence 9999999999987
No 19
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=98.26 E-value=1.7e-05 Score=51.18 Aligned_cols=78 Identities=9% Similarity=0.193 Sum_probs=65.7
Q ss_pred CCcEEEEecCCeEEEEEEecCCC--CCcEEEe-cCEEEEEEEcCC---------------CceEEEEeeccccccccCce
Q psy5240 4 IPPVIWAQRKDKILITFCVENCN--NPKIDIE-PDEIKFDAVSAD---------------KKHYKLDIKLFKSINAEKSI 65 (97)
Q Consensus 4 ~p~~~W~Qt~~~V~i~i~~~~~~--~~~v~~~-~~~l~~~~~~~~---------------~~~y~~~l~L~~~I~~e~s~ 65 (97)
.|.++++++++.+.|.+.+++++ ++.|.++ .+.|.+++.... ...|.-.+.|-..|+++..+
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~ 122 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK 122 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceE
Confidence 48899999999999999999984 7888884 579999985411 12477788899999999989
Q ss_pred EEeeCCeEEEEEEecC
Q psy5240 66 KTNKDRHIELVLKKLE 81 (97)
Q Consensus 66 ~~v~~~~iei~L~K~~ 81 (97)
-+..++-+.|+|.|..
T Consensus 123 A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 123 AGLENGVLTVTVPKAE 138 (151)
T ss_dssp EEEETTEEEEEEECCC
T ss_pred EEEECCEEEEEEEccC
Confidence 8999999999999987
No 20
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=98.00 E-value=4.8e-05 Score=45.92 Aligned_cols=76 Identities=7% Similarity=0.107 Sum_probs=64.0
Q ss_pred cEEEEecCCeEEEEEEecCCC--CCcEEEecCEEEEEEEcC---CC-----ceEEEEeeccccccccCceEEe-eCCeEE
Q psy5240 6 PVIWAQRKDKILITFCVENCN--NPKIDIEPDEIKFDAVSA---DK-----KHYKLDIKLFKSINAEKSIKTN-KDRHIE 74 (97)
Q Consensus 6 ~~~W~Qt~~~V~i~i~~~~~~--~~~v~~~~~~l~~~~~~~---~~-----~~y~~~l~L~~~I~~e~s~~~v-~~~~ie 74 (97)
.++++++++.+.|.+.+++.+ ++.|.+..+.|.+++... ++ ..|.-.+.|-..|+++..+-++ .++-+.
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~ 82 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLS 82 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEE
Confidence 367899999999999999974 889999999999998641 11 2366778899999999999999 689999
Q ss_pred EEEEecC
Q psy5240 75 LVLKKLE 81 (97)
Q Consensus 75 i~L~K~~ 81 (97)
|+|.|..
T Consensus 83 I~lPK~~ 89 (101)
T 2wj5_A 83 IQATPAS 89 (101)
T ss_dssp EEECBCC
T ss_pred EEEECCC
Confidence 9999976
No 21
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.91 E-value=0.00041 Score=42.07 Aligned_cols=77 Identities=12% Similarity=0.171 Sum_probs=65.0
Q ss_pred CcEEEEecCCeEEEEEEecCCC--CCcEEEecCEEEEEEEc---CCC-----ceEEEEeeccccccccCceEEe-eCCeE
Q psy5240 5 PPVIWAQRKDKILITFCVENCN--NPKIDIEPDEIKFDAVS---ADK-----KHYKLDIKLFKSINAEKSIKTN-KDRHI 73 (97)
Q Consensus 5 p~~~W~Qt~~~V~i~i~~~~~~--~~~v~~~~~~l~~~~~~---~~~-----~~y~~~l~L~~~I~~e~s~~~v-~~~~i 73 (97)
+..+++++++.+.|.+.+++.+ ++.|.++.+.|.+++.- ..+ ..|.-.+.|-..|+++.-+.++ .++-+
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGML 82 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEE
Confidence 3467899999999999999974 89999999999999853 111 3467778899999999999999 78999
Q ss_pred EEEEEecC
Q psy5240 74 ELVLKKLE 81 (97)
Q Consensus 74 ei~L~K~~ 81 (97)
.|+|.|..
T Consensus 83 ~I~~PK~~ 90 (106)
T 3l1e_A 83 TFSGPKIP 90 (106)
T ss_dssp EEEEEBCC
T ss_pred EEEEEccC
Confidence 99999987
No 22
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.86 E-value=0.00029 Score=41.13 Aligned_cols=71 Identities=6% Similarity=0.115 Sum_probs=60.2
Q ss_pred EecCCeEEEEEEecCC--CCCcEEEecCEEEEEEEcC--------CCceEEEEeeccccccccCceEEee-CCeEEEEEE
Q psy5240 10 AQRKDKILITFCVENC--NNPKIDIEPDEIKFDAVSA--------DKKHYKLDIKLFKSINAEKSIKTNK-DRHIELVLK 78 (97)
Q Consensus 10 ~Qt~~~V~i~i~~~~~--~~~~v~~~~~~l~~~~~~~--------~~~~y~~~l~L~~~I~~e~s~~~v~-~~~iei~L~ 78 (97)
+++++...|.+.+++. +++.|.+..+.|.+++.-. ....|.-.+.|-..|+++.-+-++. ++-+.|+|.
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 4678999999999987 4889999999999998641 1236778889999999999999997 899999999
Q ss_pred ec
Q psy5240 79 KL 80 (97)
Q Consensus 79 K~ 80 (97)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 23
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.72 E-value=0.00037 Score=40.97 Aligned_cols=71 Identities=11% Similarity=0.207 Sum_probs=56.1
Q ss_pred ecCCeEEEEEEecCCC--CCcEEEecCEEEEEEEcC---CC-----ceEEEEeeccccccccCceEEe-eCCeEEEEEEe
Q psy5240 11 QRKDKILITFCVENCN--NPKIDIEPDEIKFDAVSA---DK-----KHYKLDIKLFKSINAEKSIKTN-KDRHIELVLKK 79 (97)
Q Consensus 11 Qt~~~V~i~i~~~~~~--~~~v~~~~~~l~~~~~~~---~~-----~~y~~~l~L~~~I~~e~s~~~v-~~~~iei~L~K 79 (97)
++++.+.|++.+++.+ ++.|.+..+.|.+++... .+ ..|.-.+.|-..|+++..+-++ .++-+.|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK 82 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR 82 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence 4678899999999874 889999999999988641 11 2466778899999999999999 78999999999
Q ss_pred cC
Q psy5240 80 LE 81 (97)
Q Consensus 80 ~~ 81 (97)
..
T Consensus 83 ~~ 84 (90)
T 2y1y_A 83 KQ 84 (90)
T ss_dssp C-
T ss_pred CC
Confidence 76
No 24
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=97.49 E-value=0.00086 Score=44.26 Aligned_cols=75 Identities=11% Similarity=0.167 Sum_probs=60.0
Q ss_pred EEEEecCCeEEEEEEecCCC--CCcEEEecCEEEEEEEcC---CC-----ceEEEEeeccccccccCceEEe-eCCeEEE
Q psy5240 7 VIWAQRKDKILITFCVENCN--NPKIDIEPDEIKFDAVSA---DK-----KHYKLDIKLFKSINAEKSIKTN-KDRHIEL 75 (97)
Q Consensus 7 ~~W~Qt~~~V~i~i~~~~~~--~~~v~~~~~~l~~~~~~~---~~-----~~y~~~l~L~~~I~~e~s~~~v-~~~~iei 75 (97)
++++++++.+.|++.+++.+ +++|++..+.|.+++.-. ++ ..|.-.+.|-..|++++.+-++ .++-+.|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 57888999999999999974 889999999999988641 01 2366778899999999999999 6899999
Q ss_pred EEEecC
Q psy5240 76 VLKKLE 81 (97)
Q Consensus 76 ~L~K~~ 81 (97)
++.|+.
T Consensus 146 ~lPK~~ 151 (175)
T 2klr_A 146 NGPRKQ 151 (175)
T ss_dssp EEECC-
T ss_pred EEECCC
Confidence 999976
No 25
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=97.28 E-value=0.002 Score=46.13 Aligned_cols=78 Identities=14% Similarity=0.026 Sum_probs=66.9
Q ss_pred CCcEEEEecCC----eEEEEEEecCC--CCCcEEEecCEEEEEEEcCC-------CceEEEEeeccccccccCceEEee-
Q psy5240 4 IPPVIWAQRKD----KILITFCVENC--NNPKIDIEPDEIKFDAVSAD-------KKHYKLDIKLFKSINAEKSIKTNK- 69 (97)
Q Consensus 4 ~p~~~W~Qt~~----~V~i~i~~~~~--~~~~v~~~~~~l~~~~~~~~-------~~~y~~~l~L~~~I~~e~s~~~v~- 69 (97)
.|.++.+.+.+ .+.|++.+++. ++++|+++.+.|.+++.... ...|.-.+.|-..|++++.+-++.
T Consensus 98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~ 177 (314)
T 2bol_A 98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITT 177 (314)
T ss_dssp GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECS
T ss_pred CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeC
Confidence 36778888888 89999999987 48899999999999986411 136888899999999999999998
Q ss_pred CCeEEEEEEecC
Q psy5240 70 DRHIELVLKKLE 81 (97)
Q Consensus 70 ~~~iei~L~K~~ 81 (97)
++-+.|+|.|..
T Consensus 178 nGVL~I~lPK~~ 189 (314)
T 2bol_A 178 DDVLVIEAPVNE 189 (314)
T ss_dssp SSEEEEEEEBSS
T ss_pred CCEEEEEEeccC
Confidence 999999999987
No 26
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=95.05 E-value=0.19 Score=35.81 Aligned_cols=68 Identities=12% Similarity=0.152 Sum_probs=54.7
Q ss_pred CCeEEEEEEe-cCC--CCCcEEEecCEEEEEEEcC-C----------CceEEEEeeccccccccCceEEeeCCeEEEEEE
Q psy5240 13 KDKILITFCV-ENC--NNPKIDIEPDEIKFDAVSA-D----------KKHYKLDIKLFKSINAEKSIKTNKDRHIELVLK 78 (97)
Q Consensus 13 ~~~V~i~i~~-~~~--~~~~v~~~~~~l~~~~~~~-~----------~~~y~~~l~L~~~I~~e~s~~~v~~~~iei~L~ 78 (97)
.+.+.|.+.+ ++. +++.|+++.+.|++++.-. . -..|.-.+.|-..|+++.-+-++.++-+.|+|.
T Consensus 232 ~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~P 311 (314)
T 2bol_A 232 SKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEAP 311 (314)
T ss_dssp CEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEEE
T ss_pred CcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEEe
Confidence 4468889988 886 4889999999999988641 1 123666778999999999999999999999998
Q ss_pred ec
Q psy5240 79 KL 80 (97)
Q Consensus 79 K~ 80 (97)
|.
T Consensus 312 k~ 313 (314)
T 2bol_A 312 LF 313 (314)
T ss_dssp EE
T ss_pred cC
Confidence 85
No 27
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=37.59 E-value=72 Score=19.73 Aligned_cols=35 Identities=23% Similarity=0.205 Sum_probs=29.0
Q ss_pred CceEEEEeeccccccccCceEEeeCCeEEEEEEecC
Q psy5240 46 KKHYKLDIKLFKSINAEKSIKTNKDRHIELVLKKLE 81 (97)
Q Consensus 46 ~~~y~~~l~L~~~I~~e~s~~~v~~~~iei~L~K~~ 81 (97)
+..|.+.++|-+ +.+++-.+.+.++.|.|.-.+..
T Consensus 65 ~~~~~v~~dlPG-~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 65 DQHIKVIAWLPG-VNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SSEEEEEEECTT-CCGGGEEEEEETTEEEEEEECCC
T ss_pred CCEEEEEEECCC-CChHhEEEEEECCEEEEEEEEcc
Confidence 467999999977 68889999999999999877654
No 28
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=24.24 E-value=1.1e+02 Score=21.71 Aligned_cols=69 Identities=20% Similarity=0.270 Sum_probs=38.9
Q ss_pred cEEEE-ecCCeEEEEEEecCC--CCCcEEEecCEEEEEEEc--CCCceEEEEeeccccccccCceEEe-eCCeEE
Q psy5240 6 PVIWA-QRKDKILITFCVENC--NNPKIDIEPDEIKFDAVS--ADKKHYKLDIKLFKSINAEKSIKTN-KDRHIE 74 (97)
Q Consensus 6 ~~~W~-Qt~~~V~i~i~~~~~--~~~~v~~~~~~l~~~~~~--~~~~~y~~~l~L~~~I~~e~s~~~v-~~~~ie 74 (97)
+|.|| |+...+.-++--..+ .-.-..|+++...|+-.. .+...|-+-.+||..|..|.-...- .+|+-.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (304)
T 3shs_A 225 KYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKLYQQIEDETVEVAASTSRKCS 299 (304)
T ss_dssp EEEEEEECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEEEEEECSSCEEEEEEEECCCEE
T ss_pred EEEEEEeecCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHHHHHhhhhheeeeeecccccee
Confidence 57776 666555444433333 234567777766665332 2334566777899999876443332 345533
Done!