BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5244
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1HPS4|EIF3K_BOMMO Eukaryotic translation initiation factor 3 subunit K OS=Bombyx mori
PE=2 SV=1
Length = 218
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
D TL+ WVKKYGW++ D IFIANQDENIKTKNITEKIEF++ A +M
Sbjct: 169 DVTLKHWVKKYGWRD-DGSLIFIANQDENIKTKNITEKIEFDHLAPLM 215
>sp|Q28C65|EIF3K_XENTR Eukaryotic translation initiation factor 3 subunit K OS=Xenopus
tropicalis GN=eif3k PE=2 SV=1
Length = 218
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 35 ADQTDSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTSN 89
D ++ LR+W+ KYGW E +NG IF+ NQ+ENIK KNI EKI+F++ + IM S+
Sbjct: 163 GDLSEPQLRVWMSKYGWMESENGKIFVCNQEENIKPKNIVEKIDFDSVSGIMASS 217
>sp|Q6GNI4|EIF3K_XENLA Eukaryotic translation initiation factor 3 subunit K OS=Xenopus
laevis GN=eif3k PE=2 SV=1
Length = 218
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 35 ADQTDSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTSN 89
D ++ LR+W+ KYGW E +NG IF+ NQ+ENIK KNI EKI+F++ + IM S+
Sbjct: 163 GDLSEPQLRVWMSKYGWIESENGKIFVCNQEENIKPKNIVEKIDFDSVSGIMASS 217
>sp|Q3T0V3|EIF3K_BOVIN Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus
GN=EIF3K PE=2 SV=1
Length = 218
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%)
Query: 35 ADQTDSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTSN 89
D TDS L++W+ KYGW ++G IFI +Q+E+IK KNI EKI+F++ ++IM S+
Sbjct: 163 GDLTDSQLKVWMSKYGWSADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASS 217
>sp|Q567V6|EIF3K_DANRE Eukaryotic translation initiation factor 3 subunit K OS=Danio rerio
GN=eif3k PE=2 SV=1
Length = 219
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 42/55 (76%)
Query: 35 ADQTDSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTSN 89
D D+ +++W+ KYGW E ++G IFI NQ+E++K KNI EKI+FE+ ++IM ++
Sbjct: 164 GDPLDTQVKVWMNKYGWTENEDGQIFIHNQEESVKPKNIVEKIDFESVSSIMATS 218
>sp|B3MIY7|EIF3K_DROAN Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
ananassae GN=GF13261 PE=3 SV=1
Length = 222
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 34/48 (70%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL WVK+ GWK G + +A QD+ IKTKNITEKIEFEN +M
Sbjct: 171 DSTLESWVKRNGWKHQGQGLVVVATQDDKIKTKNITEKIEFENVGALM 218
>sp|Q9UBQ5|EIF3K_HUMAN Eukaryotic translation initiation factor 3 subunit K OS=Homo
sapiens GN=EIF3K PE=1 SV=1
Length = 218
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 42/55 (76%)
Query: 35 ADQTDSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTSN 89
D +DS L++W+ KYGW ++G IFI +Q+E+IK KNI EKI+F++ ++IM S+
Sbjct: 163 GDLSDSQLKVWMSKYGWSADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASS 217
>sp|Q9DBZ5|EIF3K_MOUSE Eukaryotic translation initiation factor 3 subunit K OS=Mus
musculus GN=Eif3k PE=1 SV=1
Length = 218
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 42/55 (76%)
Query: 35 ADQTDSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTSN 89
D TD+ L++W+ KYGW ++G +FI +Q+E+IK KNI EKI+F++ ++IM S+
Sbjct: 163 GDLTDNQLKVWMSKYGWSADESGQVFICSQEESIKPKNIVEKIDFDSVSSIMASS 217
>sp|B4JVG7|EIF3K_DROGR Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
grimshawi GN=GH22679 PE=3 SV=1
Length = 222
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK + + +A QD+ IKTKNITEKIEFEN +M
Sbjct: 171 DSTLESWIKRNGWKHQGHDLVVVATQDDKIKTKNITEKIEFENVGALM 218
>sp|B4P8V1|EIF3K_DROYA Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
yakuba GN=GE12213 PE=2 SV=1
Length = 222
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK G + +A QD+ IKTKNITEKIEF+N +M
Sbjct: 171 DSTLESWIKRNGWKHQGQGLVVVAMQDDKIKTKNITEKIEFDNVGGLM 218
>sp|B4I7U3|EIF3K_DROSE Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
sechellia GN=GM15855 PE=3 SV=1
Length = 222
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK G + +A QD+ IKTKNITEKIEF+N +M
Sbjct: 171 DSTLESWIKRNGWKNQGQGLVIVAMQDDKIKTKNITEKIEFDNVGALM 218
>sp|Q9W2D9|EIF3K_DROME Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
melanogaster GN=CG10306 PE=2 SV=1
Length = 222
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK G + +A QD+ IKTKNITEKIEF+N +M
Sbjct: 171 DSTLESWIKRNGWKNQGQGLVIVAMQDDKIKTKNITEKIEFDNVGALM 218
>sp|B3NN00|EIF3K_DROER Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
erecta GN=GG22131 PE=3 SV=1
Length = 222
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK G + +A QD+ IKTKNITEKIEF+N +M
Sbjct: 171 DSTLESWIKRNGWKHQGQGLVVVAMQDDKIKTKNITEKIEFDNVGGLM 218
>sp|B4LNQ8|EIF3K_DROVI Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
virilis GN=GJ21045 PE=3 SV=1
Length = 222
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK + + +A QD+ IKTKNITEKIEFEN +M
Sbjct: 171 DSTLENWIKRNGWKHQGHDLVVVATQDDKIKTKNITEKIEFENVGALM 218
>sp|Q292B6|EIF3K_DROPS Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
pseudoobscura pseudoobscura GN=GA24496 PE=3 SV=1
Length = 222
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 33/48 (68%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK I +A QD+ IKTKNITEKIEFEN +M
Sbjct: 171 DSTLESWIKRNGWKHQGQDLIVVAMQDDKIKTKNITEKIEFENVGALM 218
>sp|B4G9X6|EIF3K_DROPE Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
persimilis GN=GL10802 PE=3 SV=1
Length = 222
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 33/48 (68%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK I +A QD+ IKTKNITEKIEFEN +M
Sbjct: 171 DSTLESWIKRNGWKHQGQDLIVVAMQDDKIKTKNITEKIEFENVGALM 218
>sp|Q177J8|EIF3K_AEDAE Eukaryotic translation initiation factor 3 subunit K OS=Aedes
aegypti GN=AAEL006115 PE=3 SV=1
Length = 221
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 31 TKTKADQTDSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTS 88
+ D D+ LR WVKK WKE D YI +A Q+ NIKTK+ITEKI+FEN A +M +
Sbjct: 163 VRLLGDVDDNVLRAWVKKNNWKE-DGQYITVAVQEGNIKTKHITEKIDFENLAPLMAN 219
>sp|B4KTN5|EIF3K_DROMO Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
mojavensis GN=GI20605 PE=3 SV=1
Length = 222
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 33/48 (68%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
DSTL W+K+ GWK + +A QD+ IKTKNITEKIEFEN +M
Sbjct: 171 DSTLESWIKRNGWKHQGQDLVVVATQDDKIKTKNITEKIEFENVGALM 218
>sp|Q7QGK4|EIF3K_ANOGA Eukaryotic translation initiation factor 3 subunit K OS=Anopheles
gambiae GN=AGAP011580 PE=3 SV=2
Length = 221
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTS 88
+ L W+K+YGWKE + G + IA Q++NIKTK+ITEKIEF+N A +M +
Sbjct: 171 EKVLLSWLKRYGWKE-EGGLVTIATQEDNIKTKHITEKIEFDNLAPLMAN 219
>sp|B0XEA7|EIF3K_CULQU Eukaryotic translation initiation factor 3 subunit K OS=Culex
quinquefasciatus GN=CPIJ017839 PE=3 SV=2
Length = 221
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 31 TKTKADQTDSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTS 88
+ D D L WVKK GWKE + YI +A Q+ NIKTK+ITEKI+FEN +M +
Sbjct: 163 VRLLGDVDDKVLNAWVKKNGWKE-EGEYILVAQQEGNIKTKHITEKIDFENLGPLMAN 219
>sp|B4MIW0|EIF3K_DROWI Eukaryotic translation initiation factor 3 subunit K OS=Drosophila
willistoni GN=GK10740 PE=3 SV=1
Length = 222
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 39 DSTLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIM 86
D TL W+K+ WK + +A QD+ IKTKNITEKIEF+N +M
Sbjct: 171 DPTLESWIKRNSWKHQGQDLVVVATQDDKIKTKNITEKIEFDNVGALM 218
>sp|Q61K76|EIF3K_CAEBR Eukaryotic translation initiation factor 3 subunit K
OS=Caenorhabditis briggsae GN=eif-3.K PE=3 SV=1
Length = 240
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 38 TDSTLRLWVKKYGWKELDNGYIF-IANQDENIKTKNITEKIEFENAATIMTSNV 90
+D + KK+GW+ +NG +F +AN + IKT+NI EKI+F + A ++TSNV
Sbjct: 182 SDKEVTALAKKFGWETKENGEVFFVANHEGTIKTRNIDEKIQFSHVADLLTSNV 235
>sp|A7SGZ5|EIF3K_NEMVE Eukaryotic translation initiation factor 3 subunit K
OS=Nematostella vectensis GN=v1g170558 PE=3 SV=1
Length = 216
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 40 STLRLWVKKYGWKELDNGYIFIANQDENIKTKNITEKIEFENAATIMTS 88
+ L+ W+K GW D+G I++ NQ+ +IK+KNI EKI+F + A I+ +
Sbjct: 166 AQLQDWIKAKGWMSSDDGTIYVTNQEAHIKSKNIAEKIDFASVANIIAA 214
>sp|Q9XUP3|EIF3K_CAEEL Eukaryotic translation initiation factor 3 subunit K
OS=Caenorhabditis elegans GN=eif-3.K PE=2 SV=1
Length = 240
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 38 TDSTLRLWVKKYGWKELDNG-YIFIANQDENIKTKNITEKIEFENAATIMTS 88
+D + + +GW+ +NG F+AN + IKT+NI EKI+F + A ++TS
Sbjct: 182 SDKEVTALAQSFGWEAKENGDVFFVANHEGTIKTRNIDEKIQFPHVADLLTS 233
>sp|A8QDN3|EIF3K_BRUMA Eukaryotic translation initiation factor 3 subunit K OS=Brugia
malayi GN=Bm1_52955 PE=3 SV=1
Length = 236
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 38 TDSTLRLWVKKYGWKELDNGYI-FIANQDENIKTKNITEKIEFENAATIMTSNV 90
+D + + + YGW +NG + F+ N + IK++NI EK++F+ +++ NV
Sbjct: 183 SDKQVNEYARYYGWIPKENGEVYFVQNHEATIKSRNIEEKLQFDILFSLIAENV 236
>sp|Q51948|NAHD_PSEPU 2-hydroxychromene-2-carboxylate isomerase OS=Pseudomonas putida
GN=nahD PE=1 SV=1
Length = 203
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 19 VRLSSCGPSTKDTKTKADQTDSTLRLWVKKYG 50
+ + + GPS +D K K D L+ W + YG
Sbjct: 44 IAIGNVGPSNRDLKVKLDYLKVDLQRWAQLYG 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,534,369
Number of Sequences: 539616
Number of extensions: 922175
Number of successful extensions: 2369
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2333
Number of HSP's gapped (non-prelim): 37
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)