RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy5250
         (1102 letters)



>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 208

 Score = 82.6 bits (203), Expect = 2e-18
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 150 DDEDRYMAVTQFELTDARRCFPCWDEPAVKAKFSISLSVPNNKVALSNMPVKSESPQP-- 207
             ++     +Q +    R   PC D P+VK  ++  +SVP   VAL +     E+P P  
Sbjct: 124 SGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPED 183

Query: 208 DGHRLLQFETSPIMSTYLVAVVVG 231
              ++ +F     +  YL+A+VVG
Sbjct: 184 PSRKIYKFIQKVPIPCYLIALVVG 207



 Score = 64.8 bits (157), Expect = 3e-12
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 4/151 (2%)

Query: 15  SETKELKLHVIDLDFKKVQLELADGKVLTPETKISTEDETITLTFSETLPVGEVKLLFEY 74
              + L L   DL  +KV +   + K    E +                   E+ +   +
Sbjct: 47  DNLRSLVLDTKDLTIEKVVINGQEVKYALGERQSYKGSPMEISLPIALSKNQEIVIEISF 106

Query: 75  VGELNDKMKGFYRSKYRSVLHDEDRYMAVTQFCSTDARRCFPCWDEPAVKAKFAISLSVP 134
                     +   +  S    ++     +Q  +   R   PC D P+VK  +   +SVP
Sbjct: 107 ETSPKSSALQWLTPEQTS---GKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVP 163

Query: 135 SSKVALSNMVRIAIL-DDEDRYMAVTQFELT 164
              VAL + +R     D ED    + +F   
Sbjct: 164 KELVALMSAIRDGETPDPEDPSRKIYKFIQK 194



 Score = 38.6 bits (89), Expect = 0.002
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 518 GPVKSESPQP--DGHRLLQFETSPIMSTYLVAVVVG 551
                E+P P     ++ +F     +  YL+A+VVG
Sbjct: 172 AIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVG 207


>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score = 55.4 bits (132), Expect = 8e-09
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 696 MENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNLVTMEWWTHLWLNEGY 755
           MEN  L       L            ++++ V+ H+++H W GNLVT + W H WLNEG+
Sbjct: 62  MENPCLTFVTPTLL---------AGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGH 112

Query: 756 ASFVEFLCVHHLFPEYDIWTQFVTDNLVRALELDALKSSHPTQF 799
             ++E      LF E       +         +     +HP   
Sbjct: 113 TVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTK 156



 Score = 55.4 bits (132), Expect = 9e-09
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 238 ETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLPKIDLVAIP 291
           E+   G    V++   + E+  +       +L   +D     Y   + DL+ +P
Sbjct: 2   ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLP 54



 Score = 55.0 bits (131), Expect = 1e-08
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 558 ETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLPKIDLVALNP 612
           E+   G    V++   + E+  +       +L   +D     Y   + DL+ L P
Sbjct: 2   ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPP 55


>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
          Length = 385

 Score = 35.9 bits (81), Expect = 0.026
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 3/58 (5%)

Query: 325 KYPILLRPSFQIP---VGHPSEVEEIFDDISYNKGASIIRMLQKYIGDGVNSSSDSLW 379
            +P L  P  + P   +  P  VE         K     R L +  G G+ +     W
Sbjct: 30  AHPRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLLTDWGESW 87



 Score = 29.0 bits (63), Expect = 3.2
 Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 273 KDYFNIAYPLPKIDLVAIPVGHPSEVEEIFDDISYNKGASIIRMLQKYIGDG 324
           + +  +  PLP+  L    +  P  VE         K     R L +  G G
Sbjct: 29  RAHPRLFLPLPRFPLAL--IFDPEGVEGALLAEGTTKATFQYRALSRLTGRG 78


>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 244

 Score = 28.0 bits (62), Expect = 5.4
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 1   MLEKKPFERYFKIVSETKELKL----HVIDLDFKKVQLELADGKVLTPETKISTEDE 53
            LEKK  +++     +T E  +     V+ +DFK  ++E+    V  P+ +I TE E
Sbjct: 177 FLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAE 233


>d1a5ta1 a.80.1.1 (A:208-330) delta prime subunit {Escherichia coli
           [TaxId: 562]}
          Length = 123

 Score = 26.7 bits (59), Expect = 8.8
 Identities = 11/63 (17%), Positives = 18/63 (28%), Gaps = 6/63 (9%)

Query: 797 TQFVTDNLVRALE------LDALKSSHPIELYQNSDMQEEKDRISRSFSALKDPELLRKV 850
                +     L       +DALK  H      N D+      ++   S  +   +L  V
Sbjct: 27  AALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDV 86

Query: 851 LDF 853
              
Sbjct: 87  CHI 89


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,108,855
Number of extensions: 197660
Number of successful extensions: 470
Number of sequences better than 10.0: 1
Number of HSP's gapped: 466
Number of HSP's successfully gapped: 13
Length of query: 1102
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 1007
Effective length of database: 1,103,246
Effective search space: 1110968722
Effective search space used: 1110968722
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)