BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy526
(274 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P78367|NKX32_HUMAN Homeobox protein Nkx-3.2 OS=Homo sapiens GN=NKX3-2 PE=2 SV=2
Length = 333
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 89/126 (70%), Gaps = 19/126 (15%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKKRSRAAFSHAQV+ELE+RFN Q+YLSGPERAD+A SLKLTETQVKIWFQNRRYKTKR+
Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR 264
Query: 119 QL--QLLEGSLNTPSAGNGKKVAVKILVRESHPYGSDYLYGTQGK---LLPPAPSMANSL 173
Q+ LL SA KKVAVK+LVR+ YL G + LLP PS
Sbjct: 265 QMAADLLA------SAPAAKKVAVKVLVRDDQ---RQYLPGEVLRPPSLLPLQPS----- 310
Query: 174 YYYPLF 179
YYYP +
Sbjct: 311 YYYPYY 316
>sp|P97503|NKX32_MOUSE Homeobox protein Nkx-3.2 OS=Mus musculus GN=Nkx3-2 PE=1 SV=2
Length = 333
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 89/126 (70%), Gaps = 19/126 (15%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKKRSRAAFSHAQV+ELE+RFN Q+YLSGPERAD+A SLKLTETQVKIWFQNRRYKTKR+
Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR 264
Query: 119 QL--QLLEGSLNTPSAGNGKKVAVKILVRESHPYGSDYLYGTQGK---LLPPAPSMANSL 173
Q+ LL SA KKVAVK+LVR+ YL G + LLP PS
Sbjct: 265 QMAADLLA------SAPAAKKVAVKVLVRDDQ---RQYLPGEVLRPPSLLPLQPS----- 310
Query: 174 YYYPLF 179
YYYP +
Sbjct: 311 YYYPYY 316
>sp|P22809|BAGP_DROME Homeobox protein bagpipe OS=Drosophila melanogaster GN=bap PE=2
SV=3
Length = 382
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 75/88 (85%), Gaps = 4/88 (4%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKKRSRAAFSHAQV+ELE+RF Q+YLSGPER+++AKSL+LTETQVKIWFQNRRYKTKRK
Sbjct: 174 RKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRK 233
Query: 119 QLQLLEGSLNTPSAGNGKKVAVKILVRE 146
Q+Q E +L G K+V V++LVRE
Sbjct: 234 QIQQHEAAL----LGASKRVPVQVLVRE 257
>sp|O93590|ZAX_XENLA Homeobox protein zampogna OS=Xenopus laevis GN=zax PE=2 SV=1
Length = 224
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 87/129 (67%), Gaps = 11/129 (8%)
Query: 56 PTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKT 115
P KKRSRAAFSHAQVYELE+RF+ Q+YLSGPERAD+A SLKLTETQVKIWFQNRRYKT
Sbjct: 96 PKSSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAASLKLTETQVKIWFQNRRYKT 155
Query: 116 KRKQL--QLLEGSLNTPSAGNGKKVAVKILVRESHPYGSDYLYGTQGKLLPPAPSMANSL 173
KRK + Q S P+ +KVAV++LV++ Y + L P S+ ++
Sbjct: 156 KRKLIATQTAPKSSLVPT----RKVAVRVLVKDDQ-----RQYCPEDMLSPSLLSLYHAY 206
Query: 174 YYYPLFYNM 182
YYP Y +
Sbjct: 207 QYYPYMYCL 215
>sp|P70061|NKX32_XENLA Homeobox protein Nkx-3.2 OS=Xenopus laevis GN=nkx3-2 PE=2 SV=1
Length = 329
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 54 QPPTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRY 113
+PP RKKRSRAAFSHAQV+ELE+RFN Q+YLSGPERAD+A SLKLTETQVKIWFQNRRY
Sbjct: 196 EPPKQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRY 255
Query: 114 KTKRKQL 120
KTKR+Q+
Sbjct: 256 KTKRRQM 262
>sp|Q9W7E8|KOZA_XENLA Homeobox protein koza OS=Xenopus laevis GN=koza PE=2 SV=1
Length = 213
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 85/121 (70%), Gaps = 10/121 (8%)
Query: 3 SMKDSEEYY--KKINNNNITNNTMSYYGKKDIRDARDLPKP-AALSNLPGLAQSQPPTGR 59
S++D+EE Y +K+ +++ + + D D +P A+ N LA+ Q
Sbjct: 49 SLRDTEEKYASEKLQSSSQPAEIHHSHMEADENLELDTAQPITAVEN--KLAKQQ----- 101
Query: 60 KKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRKQ 119
+KRSRAAFSH+QV ELE++F++QKYLS PERA +AKSLKLTETQVKIWFQNRRYKTKRKQ
Sbjct: 102 QKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKIWFQNRRYKTKRKQ 161
Query: 120 L 120
L
Sbjct: 162 L 162
>sp|Q99801|NKX31_HUMAN Homeobox protein Nkx-3.1 OS=Homo sapiens GN=NKX3-1 PE=1 SV=2
Length = 234
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 2/74 (2%)
Query: 47 LPGLAQSQPPTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKI 106
LP L Q+ P +KRSRAAFSH QV ELE++F+ QKYLS PERA +AK+LKLTETQVKI
Sbjct: 113 LPRLPQT--PKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKI 170
Query: 107 WFQNRRYKTKRKQL 120
WFQNRRYKTKRKQL
Sbjct: 171 WFQNRRYKTKRKQL 184
>sp|P97436|NKX31_MOUSE Homeobox protein Nkx-3.1 OS=Mus musculus GN=Nkx3-1 PE=1 SV=1
Length = 237
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 5/80 (6%)
Query: 41 PAALSNLPGLAQSQPPTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLT 100
P L++ P + + QP +KRSRAAFSH QV ELE++F+ QKYLS PERA +AK+LKLT
Sbjct: 111 PGDLASAPQVTK-QP----QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLT 165
Query: 101 ETQVKIWFQNRRYKTKRKQL 120
ETQVKIWFQNRRYKTKRKQL
Sbjct: 166 ETQVKIWFQNRRYKTKRKQL 185
>sp|P52952|NKX25_HUMAN Homeobox protein Nkx-2.5 OS=Homo sapiens GN=NKX2-5 PE=1 SV=1
Length = 324
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 67 FSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR-KQLQLLE- 124
FS AQVYELE+RF Q+YLS PER +A LKLT TQVKIWFQNRRYK KR +Q Q LE
Sbjct: 145 FSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLEL 204
Query: 125 GSLNTPSAGNGKKVAVKILVRESHPYGSD 153
L P +++AV +LVR+ P D
Sbjct: 205 VGLPPPPPPPARRIAVPVLVRDGKPCLGD 233
>sp|Q90788|NKX25_CHICK Homeobox protein Nkx-2.5 OS=Gallus gallus GN=NKX-2.5 PE=2 SV=1
Length = 294
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 62/96 (64%), Gaps = 12/96 (12%)
Query: 67 FSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR-KQLQLLEG 125
FS AQVYELE+RF QKYLS PER +A LKLT TQVKIWFQNRRYK KR +Q Q LE
Sbjct: 126 FSQAQVYELERRFKQQKYLSAPERDHLANVLKLTSTQVKIWFQNRRYKCKRQRQDQTLEM 185
Query: 126 SLNTPSAGNGKKVAVKILVR-------ESHPYGSDY 154
P +++AV +LVR ES PY S Y
Sbjct: 186 VGIPPP----RRIAVPVLVRDGKPCLGESSPYSSPY 217
>sp|P42582|NKX25_MOUSE Homeobox protein Nkx-2.5 OS=Mus musculus GN=Nkx2-5 PE=1 SV=1
Length = 318
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 67 FSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR-KQLQLLEG 125
FS AQVYELE+RF Q+YLS PER +A LKLT TQVKIWFQNRRYK KR +Q Q LE
Sbjct: 144 FSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLE- 202
Query: 126 SLNTPSAGNGKKVAVKILVRESHPYGSD 153
L P +++AV +LVR+ P D
Sbjct: 203 -LLGPPPPPARRIAVPVLVRDGKPCLGD 229
>sp|P42583|NKX25_XENLA Homeobox protein Nkx-2.5 OS=Xenopus laevis GN=nkx-2.5 PE=2 SV=1
Length = 299
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 62/96 (64%), Gaps = 12/96 (12%)
Query: 67 FSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR-KQLQLLEG 125
FS AQVYELE+RF QKYLS PER +A LKLT TQVKIWFQNRRYK KR +Q Q LE
Sbjct: 131 FSQAQVYELERRFKQQKYLSAPERDHLANVLKLTSTQVKIWFQNRRYKCKRQRQDQTLEM 190
Query: 126 SLNTPSAGNGKKVAVKILVR-------ESHPYGSDY 154
P +++AV +LVR ES PY S Y
Sbjct: 191 VGLPPP----RRIAVPVLVRDGKPCLGESSPYNSPY 222
>sp|P42587|HNK2_XENLA Homeobox protein XENK-2 OS=Xenopus laevis PE=2 SV=1
Length = 196
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 53 SQPPTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRR 112
S P +G+K++ R FS AQ YELE+RF Q+YLS PER +A ++LT TQVKIWFQN R
Sbjct: 62 SNPDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHR 121
Query: 113 YKTKRKQLQLLEGSLNTPSAGNGKKVAVKILVRESHP 149
YK KR + E + + ++VAV +LVR+ P
Sbjct: 122 YKMKRAR---SEKGMEVTPLPSPRRVAVPVLVRDGKP 155
>sp|A6NCS4|NKX26_HUMAN Homeobox protein Nkx-2.6 OS=Homo sapiens GN=NKX2-6 PE=1 SV=1
Length = 301
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 65/100 (65%), Gaps = 10/100 (10%)
Query: 54 QPPTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRY 113
QP ++++ R FS AQV LE+RF Q+YLS PER +A +L+LT TQVKIWFQNRRY
Sbjct: 126 QPKARQRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRY 185
Query: 114 KTKR----KQLQLLEGSLNTPSAGNGKKVAVKILVRESHP 149
K KR K L+ L G TP ++VAV +LVR+ P
Sbjct: 186 KCKRQRQDKSLE-LAGHPLTP-----RRVAVPVLVRDGKP 219
>sp|Q90481|NX22A_DANRE Homeobox protein Nkx-2.2a OS=Danio rerio GN=nkx2.2a PE=2 SV=1
Length = 269
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 57 TGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTK 116
+G+K++ R FS AQ YELE+RF Q+YLS PER +A ++LT TQVKIWFQN RYK K
Sbjct: 122 SGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMK 181
Query: 117 RKQLQLLEGSLNTPSAGNGKKVAVKILVRE---SHPYGSDYLYGTQGKLLPPAPSMANSL 173
R + E + + ++VAV +LVR+ H + L T +P + A SL
Sbjct: 182 RAR---AEKGMEVTHLPSPRRVAVPVLVRDGKPCHTLKAQDLAATFQAGIPFSAYSAQSL 238
Query: 174 YYYPLFYNMH 183
+ + YN H
Sbjct: 239 QH--MQYNAH 246
>sp|P22808|VND_DROME Homeobox protein vnd OS=Drosophila melanogaster GN=vnd PE=1 SV=3
Length = 723
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 12/107 (11%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
+K++ R F+ AQ YELE+RF Q+YLS PER +A ++LT TQVKIWFQN RYKTKR
Sbjct: 544 KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRA 603
Query: 119 QLQ--------LLEGSLNTPSAGNG----KKVAVKILVRESHPYGSD 153
Q + LL G P + ++VAV +LVR P D
Sbjct: 604 QNEKGYEGHPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPCLGD 650
>sp|P42586|NKX22_MOUSE Homeobox protein Nkx-2.2 OS=Mus musculus GN=Nkx2-2 PE=1 SV=2
Length = 273
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 58 GRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR 117
G+K++ R FS AQ YELE+RF Q+YLS PER +A ++LT TQVKIWFQN RYK KR
Sbjct: 126 GKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKR 185
Query: 118 KQLQLLEGSLNTPSAGNGKKVAVKILVRESHP 149
+ E + + ++VAV +LVR+ P
Sbjct: 186 AR---AEKGMEVTPLPSPRRVAVPVLVRDGKP 214
>sp|O95096|NKX22_HUMAN Homeobox protein Nkx-2.2 OS=Homo sapiens GN=NKX2-2 PE=2 SV=1
Length = 273
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 58 GRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR 117
G+K++ R FS AQ YELE+RF Q+YLS PER +A ++LT TQVKIWFQN RYK KR
Sbjct: 126 GKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKR 185
Query: 118 KQLQLLEGSLNTPSAGNGKKVAVKILVRESHP 149
+ E + + ++VAV +LVR+ P
Sbjct: 186 AR---AEKGMEVTPLPSPRRVAVPVLVRDGKP 214
>sp|Q9EQM3|NKX24_MOUSE Homeobox protein Nkx-2.4 OS=Mus musculus GN=Nkx2-4 PE=2 SV=2
Length = 354
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 74/127 (58%), Gaps = 14/127 (11%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR- 117
R+KR R FS AQVYELE+RF QKYLS PER +A + LT TQVKIWFQN RYK KR
Sbjct: 188 RRKR-RVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 246
Query: 118 ------KQLQLLEGSLN---TPSAGNGKKVAVKILVRESHPY--GSDYLYGTQGKLLPPA 166
+QLQ EG L P + ++VAV +LV++ P G+ QG P A
Sbjct: 247 AKDKAAQQLQ-QEGGLGPPPPPPPPSPRRVAVPVLVKDGKPCQNGAGTPTPGQGGQQPQA 305
Query: 167 PSMANSL 173
P+ A L
Sbjct: 306 PTPAPEL 312
>sp|O35767|NKX25_RAT Homeobox protein Nkx-2.5 OS=Rattus norvegicus GN=Nkx2-5 PE=2 SV=1
Length = 318
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 67 FSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR-KQLQLLEG 125
FS AQVYELE+RF Q+YLS ER +A LKLT TQVKIWFQNRRYK KR +Q Q LE
Sbjct: 144 FSQAQVYELERRFKQQRYLSPAERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLE- 202
Query: 126 SLNTPSAGNGKKVAVKILVRESHPYGSD 153
L P +++AV +LVR+ P D
Sbjct: 203 -LLGPPPPPARRIAVPVLVRDGKPCLGD 229
>sp|P43697|NKX22_MESAU Homeobox protein Nkx-2.2 OS=Mesocricetus auratus GN=NKX2-2 PE=2
SV=1
Length = 273
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 58 GRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR 117
G+K++ R FS AQ YELE+RF Q+YLS PER +A ++LT TQVKIWFQN RYK KR
Sbjct: 126 GKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKR 185
Query: 118 KQLQLLEGSLNTPSAGNGKKVAVKILVRESHP 149
+ E + + + VAV +LVR+ P
Sbjct: 186 AR---AEKGMEVTPLPSPRCVAVPVLVRDGKP 214
>sp|Q8TAU0|NKX23_HUMAN Homeobox protein Nkx-2.3 OS=Homo sapiens GN=NKX2-3 PE=1 SV=2
Length = 364
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 52 QSQPPTGRKKRS-RAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQN 110
+S+ P R +R R FS AQV+ELE+RF Q+YLS PER +A SLKLT TQVKIWFQN
Sbjct: 139 ESERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQN 198
Query: 111 RRYKTKRKQ 119
RRYK KR++
Sbjct: 199 RRYKCKRQR 207
>sp|Q9H2Z4|NKX24_HUMAN Homeobox protein Nkx-2.4 OS=Homo sapiens GN=NKX2-4 PE=2 SV=3
Length = 354
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 64/100 (64%), Gaps = 11/100 (11%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR- 117
R+KR R FS AQVYELE+RF QKYLS PER +A + LT TQVKIWFQN RYK KR
Sbjct: 189 RRKR-RVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 247
Query: 118 ------KQLQLLEGSLN--TPSAGNGKKVAVKILVRESHP 149
+QLQ EG L P + ++VAV +LV++ P
Sbjct: 248 AKDKAAQQLQ-QEGGLGPPPPPPPSPRRVAVPVLVKDGKP 286
>sp|P97334|NKX23_MOUSE Homeobox protein Nkx-2.3 OS=Mus musculus GN=Nkx2-3 PE=2 SV=2
Length = 362
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 60 KKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRKQ 119
+++ R FS AQV+ELE+RF Q+YLS PER +A SLKLT TQVKIWFQNRRYK KR++
Sbjct: 145 RRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQR 204
>sp|P42581|HMX3_MOUSE Homeobox protein HMX3 OS=Mus musculus GN=Hmx3 PE=1 SV=3
Length = 356
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 56 PTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKT 115
P RKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K
Sbjct: 223 PACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKW 282
Query: 116 KRKQLQLLEGSLNTPSAGNGKKVAVKILVRE 146
KR+ LE + N A + V V IL E
Sbjct: 283 KRQLAAELEAA-NLSHAAAQRIVRVPILYHE 312
>sp|A6NHT5|HMX3_HUMAN Homeobox protein HMX3 OS=Homo sapiens GN=HMX3 PE=2 SV=1
Length = 357
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 56 PTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKT 115
P RKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K
Sbjct: 223 PACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKW 282
Query: 116 KRKQLQLLEGSLNTPSAGNGKKVAVKILVRE 146
KR+ LE + N A + V V IL E
Sbjct: 283 KRQLAAELEAA-NLSHAAAQRIVRVPILYHE 312
>sp|P43688|NKX26_MOUSE Homeobox protein Nkx-2.6 OS=Mus musculus GN=Nkx2-6 PE=2 SV=2
Length = 289
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 8/93 (8%)
Query: 60 KKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTK-RK 118
+++SR FS AQV LE+RF Q+YL+ PER +A +L+LT TQVKIWFQNRRYK+K ++
Sbjct: 123 QRKSRVLFSQAQVLALERRFKQQRYLTAPEREHLASALQLTSTQVKIWFQNRRYKSKSQR 182
Query: 119 QLQLLE--GSLNTPSAGNGKKVAVKILVRESHP 149
Q Q LE G P ++VAV +LV + P
Sbjct: 183 QDQTLELAGHPLAP-----RRVAVPVLVLDGKP 210
>sp|O70218|HMX1_MOUSE Homeobox protein HMX1 OS=Mus musculus GN=Hmx1 PE=2 SV=1
Length = 332
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 58 GRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR 117
GR+K++R FS +QV++LE F+ ++YLS ERA +A SL+LTETQVKIWFQNRR K KR
Sbjct: 189 GRRKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKR 248
Query: 118 KQLQLLEGSLNTPSAGNGKKVAVKILVRES 147
+ LE + +P G + V V +L ES
Sbjct: 249 QLAAELEAASLSPP-GAQRLVRVPVLYHES 277
>sp|Q9DE09|HMX1_CHICK Homeobox protein HMX1 OS=Gallus gallus GN=HMX1 PE=2 SV=1
Length = 333
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 58 GRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR 117
GRKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K KR
Sbjct: 199 GRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKR 258
Query: 118 KQLQLLEGSLNTPSAGNGKKVAVKILVRESHP 149
+ LE + N A + V V IL E+ P
Sbjct: 259 QLAADLEAA-NLSHAAQ-RIVRVPILYHENSP 288
>sp|Q9VEI9|HMX_DROME Homeobox protein Hmx OS=Drosophila melanogaster GN=Hmx PE=2 SV=3
Length = 592
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKK++R FS AQV++LE F+ ++YLS ERA +A SL+LTETQVKIWFQNRR K KR+
Sbjct: 467 RKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQ 526
Query: 119 QLQLLE 124
LE
Sbjct: 527 LAAELE 532
>sp|P43698|TITF1_CANFA Thyroid transcription factor 1 OS=Canis familiaris GN=TITF1 PE=2
SV=1
Length = 371
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 56 PTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKT 115
P+ +++ R FS AQVYELE+RF QKYLS PER +A + LT TQVKIWFQN RYK
Sbjct: 157 PSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKM 216
Query: 116 KRK 118
KR+
Sbjct: 217 KRQ 219
>sp|P43699|NKX21_HUMAN Homeobox protein Nkx-2.1 OS=Homo sapiens GN=NKX2-1 PE=1 SV=1
Length = 371
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 56 PTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKT 115
P+ +++ R FS AQVYELE+RF QKYLS PER +A + LT TQVKIWFQN RYK
Sbjct: 157 PSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKM 216
Query: 116 KRK 118
KR+
Sbjct: 217 KRQ 219
>sp|P23441|NKX21_RAT Homeobox protein Nkx-2.1 OS=Rattus norvegicus GN=Nkx2-1 PE=1 SV=1
Length = 372
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 56 PTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKT 115
P+ +++ R FS AQVYELE+RF QKYLS PER +A + LT TQVKIWFQN RYK
Sbjct: 157 PSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKM 216
Query: 116 KRK 118
KR+
Sbjct: 217 KRQ 219
>sp|P50220|NKX21_MOUSE Homeobox protein Nkx-2.1 OS=Mus musculus GN=Nkx2-1 PE=2 SV=1
Length = 372
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 56 PTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKT 115
P+ +++ R FS AQVYELE+RF QKYLS PER +A + LT TQVKIWFQN RYK
Sbjct: 157 PSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKM 216
Query: 116 KRK 118
KR+
Sbjct: 217 KRQ 219
>sp|Q90XP0|HMX3A_ORYLA Homeobox protein HMX3-A OS=Oryzias latipes GN=hmx3a PE=2 SV=1
Length = 303
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K KR+
Sbjct: 174 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 233
Query: 119 QLQLLEGSLNTPSAGNGKKVAVKILVRE 146
LE + N A + V V IL E
Sbjct: 234 LAAELEAA-NLSHAAAQRIVRVPILYHE 260
>sp|Q504H8|HMX3_DANRE Homeobox protein HMX3 OS=Danio rerio GN=hmx3 PE=2 SV=1
Length = 297
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K KR+
Sbjct: 169 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 228
Query: 119 QLQLLEGSLNTPSAGNGKKVAVKILVRE 146
LE + N A + V V IL E
Sbjct: 229 LAAELEAA-NLSHAAAQRIVRVPILYHE 255
>sp|O17319|HM24_CAEBR Homeobox protein ceh-24 OS=Caenorhabditis briggsae GN=ceh-24 PE=3
SV=3
Length = 293
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 21 NNTMSYYGKKDIR-DARDLPKPAALSNLPGLAQSQPPTGRKKRSRAAFSHAQVYELEKRF 79
N + ++Y D R A P A+ + Q ++++ R FS AQVYELE+RF
Sbjct: 104 NGSQNWYNGNDARFAAAAALLPCAIDPVRSAINHQFSMSQRRKRRVLFSQAQVYELERRF 163
Query: 80 NAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRKQ 119
KYL+ PER +A S++LT TQVKIWFQN RYK KR++
Sbjct: 164 KQAKYLTAPEREQLANSIRLTPTQVKIWFQNHRYKCKRQE 203
>sp|Q90XN9|HMX3B_ORYLA Homeobox protein HMX3-B OS=Oryzias latipes GN=hmx3b PE=2 SV=1
Length = 290
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K KR+
Sbjct: 165 RKKKTRTVFSRSQVFQLESTFDIKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 224
Query: 119 QLQLLEGSLNTPSAGNGKKVAVKILVRES 147
LE + N A + V V IL +S
Sbjct: 225 LAAELEAA-NMSHAAAQRIVRVPILYHDS 252
>sp|Q00401|HMH2_DUGTI Homeobox protein DTH-2 OS=Dugesia tigrina GN=DTH-2 PE=2 SV=1
Length = 363
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
R+KR R FS AQ+YELE+RF QKYLS PER +A + LT TQVKIWFQN RYK KR
Sbjct: 133 RRKR-RILFSQAQIYELERRFKQQKYLSAPEREHLANLINLTPTQVKIWFQNHRYKCKRS 191
Query: 119 Q 119
Q
Sbjct: 192 Q 192
>sp|Q8JJ64|HMX3_XENLA Homeobox protein HMX3 OS=Xenopus laevis GN=hmx3 PE=1 SV=1
Length = 306
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K KR+
Sbjct: 177 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 236
Query: 119 QLQLLEGSLNTPSAGNGKKVAVKIL 143
LE + N A + V V IL
Sbjct: 237 LAAELEAA-NLSHAAAQRIVRVPIL 260
>sp|Q0P4W6|HMX3_XENTR Homeobox protein HMX3 OS=Xenopus tropicalis GN=hmx3 PE=2 SV=1
Length = 306
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K KR+
Sbjct: 177 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 236
Query: 119 QLQLLEGSLNTPSAGNGKKVAVKIL 143
LE + N A + V V IL
Sbjct: 237 LAAELEAA-NLSHAAAQRIVRVPIL 260
>sp|O57601|HMX3_CHICK Homeobox protein HMX3 OS=Gallus gallus GN=HMX3 PE=2 SV=1
Length = 308
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
RKK++R FS +QV++LE F+ ++YLS ERA +A SL LTETQVKIWFQNRR K KR+
Sbjct: 180 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 239
Query: 119 QLQLLEGSLNTPSAGNGKKVAVKILVRE 146
LE + N A + V V IL E
Sbjct: 240 LAAELEAA-NLSHAAAQRIVRVPILYHE 266
>sp|Q9NLC2|HM24_CAEEL Homeobox protein ceh-24 OS=Caenorhabditis elegans GN=ceh-24 PE=2
SV=1
Length = 299
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
R+KR R FS AQVYELE+RF KYL+ PER +A S++LT TQVKIWFQN RYK KR+
Sbjct: 150 RRKR-RVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQNHRYKCKRQ 208
Query: 119 Q 119
+
Sbjct: 209 E 209
>sp|O70584|NKX28_MOUSE Homeobox protein Nkx-2.8 OS=Mus musculus GN=Nkx2-8 PE=2 SV=1
Length = 235
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 41 PAALSNLPGLAQSQP---PTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSL 97
PA S L L + P P R+KR R FS AQ ELE+RF Q+YLS PER +A+ L
Sbjct: 60 PADSSQLASLRRESPGSDPEKRRKR-RVLFSKAQTLELERRFRQQRYLSAPEREQLARLL 118
Query: 98 KLTETQVKIWFQNRRYKTKR 117
+LT TQVKIWFQN RYK KR
Sbjct: 119 RLTPTQVKIWFQNHRYKLKR 138
>sp|Q26656|HMX_STRPU Homeobox protein Hmx (Fragment) OS=Strongylocentrotus purpuratus
GN=HMX PE=2 SV=1
Length = 405
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 54 QPPTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRY 113
Q P +KK++R FS +QV++LE F ++YLS ERA +A +L LTETQVKIWFQNRR
Sbjct: 247 QSPQKKKKKTRTVFSRSQVFQLESTFEVKRYLSSSERAGLAANLHLTETQVKIWFQNRRN 306
Query: 114 KTKRKQLQLLEGS 126
K KR+ LE +
Sbjct: 307 KWKRQMAAELESA 319
>sp|P22711|TIN_DROME Muscle-specific homeobox protein tinman OS=Drosophila melanogaster
GN=tin PE=2 SV=2
Length = 416
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Query: 60 KKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKR-- 117
K++ R FS AQV ELE RF +KYL+G ER +A+ L L+ TQVKIWFQNRRYK+KR
Sbjct: 301 KRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRGD 360
Query: 118 -------KQLQLLEGSLNTPSA 132
K L+L L++P++
Sbjct: 361 IDCEGIAKHLKLKSEPLDSPTS 382
>sp|P52951|GBX2_HUMAN Homeobox protein GBX-2 OS=Homo sapiens GN=GBX2 PE=2 SV=3
Length = 348
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%)
Query: 49 GLAQSQPPTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWF 108
G A S TG+ +R R AF+ Q+ ELEK F+ +KYLS ER+ +A +LKL+E QVKIWF
Sbjct: 236 GAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWF 295
Query: 109 QNRRYKTKR 117
QNRR K KR
Sbjct: 296 QNRRAKWKR 304
>sp|P48031|GBX2_MOUSE Homeobox protein GBX-2 OS=Mus musculus GN=Gbx2 PE=2 SV=1
Length = 348
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%)
Query: 49 GLAQSQPPTGRKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWF 108
G A S TG+ +R R AF+ Q+ ELEK F+ +KYLS ER+ +A +LKL+E QVKIWF
Sbjct: 236 GAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWF 295
Query: 109 QNRRYKTKR 117
QNRR K KR
Sbjct: 296 QNRRAKWKR 304
>sp|Q3C1V8|BSH_HUMAN Brain-specific homeobox protein homolog OS=Homo sapiens GN=BSX PE=2
SV=2
Length = 233
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Query: 59 RKKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRK 118
R++++R FS +Q+ LEKRF Q+YLS PER ++A +L L+ETQVK WFQNRR K K++
Sbjct: 109 RRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ 168
Query: 119 QLQLLEGSLNTPSAGNGKKVAVKILVRESHPYGSDYLYGTQGKLLPPA 166
L S + P A +G + E P GS+ + +L PA
Sbjct: 169 ----LRKSQDEPKAPDGPESP------EGSPRGSEAATAAEARLSLPA 206
>sp|A2RU54|HMX2_HUMAN Homeobox protein HMX2 OS=Homo sapiens GN=HMX2 PE=2 SV=1
Length = 273
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 60 KKRSRAAFSHAQVYELEKRFNAQKYLSGPERADVAKSLKLTETQVKIWFQNRRYKTKRKQ 119
KK++R FS +QVY+LE F+ ++YLS ERA +A SL+LTETQVK WFQNRR K KR+
Sbjct: 149 KKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQL 208
Query: 120 LQLLEGSLNTPSAGNGKKVAVKILVRES 147
LE + N A V++ ++ R+S
Sbjct: 209 SAELEAA-NMAHASAQTLVSMPLVFRDS 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,395,414
Number of Sequences: 539616
Number of extensions: 4836826
Number of successful extensions: 14615
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 13170
Number of HSP's gapped (non-prelim): 1514
length of query: 274
length of database: 191,569,459
effective HSP length: 116
effective length of query: 158
effective length of database: 128,974,003
effective search space: 20377892474
effective search space used: 20377892474
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)