BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5261
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22942|OXDA_RABIT D-amino-acid oxidase OS=Oryctolagus cuniculus GN=DAO PE=2 SV=1
Length = 347
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 141/289 (48%), Gaps = 33/289 (11%)
Query: 4 PVISVDASVQNEDGSRTL---TLSQTKFSADGSTGKAMISTYQT--SLLKNASIENLVPV 58
P +S ++ Q D SR LS + G A+IS Y + + S ++ V
Sbjct: 54 PYLSDPSNPQEADWSRQTFNHLLSHIHSPSAEKMGLALISGYNLFRKAVPDPSWKDTVLG 113
Query: 59 YRDAQPDELVVGNKTYKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLES 118
+R EL + Y YG ++ +L+++ +L W KR++++G K + V SF +
Sbjct: 114 FRKLTLRELDM-FPGYSYGWFNTSLILDGRSYLQWLTKRLTERGVKLFQRKVESFDEVAG 172
Query: 119 E-FDFVFNCAGLGAQALCRDRKLTPIRGQVIKVWAPWLSHFYYLDYD--------VYVIP 169
D + NC G+ A AL D L P RGQ+IKV APW+ HF + +D Y+IP
Sbjct: 173 GGVDVIVNCTGVWASALQPDPLLQPGRGQIIKVDAPWVKHF-IITHDPESGIYKSPYIIP 231
Query: 170 HSNGAVTLGGCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRPHR---- 225
+ AVTLGG ++S S D +I + C SL P L++A ++ EW G RP R
Sbjct: 232 GVH-AVTLGGIFQMGNWSEGNSTDDHNTIWKGCCSLEPTLKDARIVGEWTGFRPVRPQIR 290
Query: 226 ------------SLVIHNYGHGGYGVTTAPGTSRYAVQLVKQALDPTSS 262
+ VIHNYGHGGYG+T G + A +L + L+ S
Sbjct: 291 LGREQLSAGPSKTEVIHNYGHGGYGLTIHWGCALEAAKLFGKILEEKKS 339
>sp|O35078|OXDA_RAT D-amino-acid oxidase OS=Rattus norvegicus GN=Dao PE=2 SV=1
Length = 346
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 125/251 (49%), Gaps = 30/251 (11%)
Query: 35 GKAMISTYQT--SLLKNASIENLVPVYRDAQPDELVVGNKTYKYGSYSETLVIENSDFLP 92
G A+IS Y + + ++ V +R P EL + Y YG ++ +L++E +L
Sbjct: 87 GLALISGYNLFRDEVPDPFWKSTVLGFRKLTPSELDM-FPDYSYGWFNTSLLLEGKSYLS 145
Query: 93 WAMKRVSKQGGKFRRGTVSSFSGL-ESEFDFVFNCAGLGAQALCRDRKLTPIRGQVIKVW 151
W +R++++G KF V+SF + D + NC G+ A AL D L P RGQ+I+V
Sbjct: 146 WLTERLTERGVKFIHRKVASFEEVVRGGVDVIINCTGVWAGALQADASLQPGRGQIIQVE 205
Query: 152 APWLSHFYYLDYD--------VYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCY 203
APW+ HF L +D Y+IP S VTLGG ++S S HD +I + C
Sbjct: 206 APWIKHF-ILTHDPSLGIYNSPYIIPGSK-TVTLGGVFQLGNWSELNSVHDHNTIWKSCC 263
Query: 204 SLLPRLEEAPVLYEWCGLRPHR----------------SLVIHNYGHGGYGVTTAPGTSR 247
L P L+ A ++ E G RP R + VIHNYGHGGYG+T G +
Sbjct: 264 QLEPTLKNARIMGELTGFRPVRPQVRLERERLRFGSSSAEVIHNYGHGGYGLTIHWGCAM 323
Query: 248 YAVQLVKQALD 258
A L + L+
Sbjct: 324 EAANLFGKILE 334
>sp|P14920|OXDA_HUMAN D-amino-acid oxidase OS=Homo sapiens GN=DAO PE=1 SV=3
Length = 347
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 138/285 (48%), Gaps = 33/285 (11%)
Query: 4 PVISVDASVQNEDGSRTL---TLSQTKFSADGSTGKAMISTYQT--SLLKNASIENLVPV 58
P +S + Q D S+ LS + G +IS Y + + S ++ V
Sbjct: 54 PYLSDPNNPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLG 113
Query: 59 YRDAQPDELVVGNKTYKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLES 118
+R P EL + Y YG + +L++E ++L W +R++++G KF + V SF +
Sbjct: 114 FRKLTPRELDM-FPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAR 172
Query: 119 E-FDFVFNCAGLGAQALCRDRKLTPIRGQVIKVWAPWLSHFYYLDYD--------VYVIP 169
E D + NC G+ A AL RD L P RGQ++KV APW+ HF L +D Y+IP
Sbjct: 173 EGADVIVNCTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHF-ILTHDPERGIYNSPYIIP 231
Query: 170 HSNGAVTLGGCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRPHR---- 225
+ VTLGG ++S + D +I E C L P L+ A ++ E G RP R
Sbjct: 232 GTQ-TVTLGGIFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIR 290
Query: 226 ------------SLVIHNYGHGGYGVTTAPGTSRYAVQLVKQALD 258
+ VIHNYGHGGYG+T G + A +L + L+
Sbjct: 291 LEREQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILE 335
>sp|P18894|OXDA_MOUSE D-amino-acid oxidase OS=Mus musculus GN=Dao PE=1 SV=3
Length = 345
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 122/250 (48%), Gaps = 29/250 (11%)
Query: 35 GKAMISTYQT--SLLKNASIENLVPVYRDAQPDELVVGNKTYKYGSYSETLVIENSDFLP 92
G A+IS Y + + +N V +R P E+ + Y YG ++ +L++E +LP
Sbjct: 87 GLALISGYNLFRDEVPDPFWKNAVLGFRKLTPSEMDL-FPDYGYGWFNTSLLLEGKSYLP 145
Query: 93 WAMKRVSKQGGKFRRGTVSSFSGLESEFDFVFNCAGLGAQALCRDRKLTPIRGQVIKVWA 152
W +R++++G K V S + D + NC G+ A AL D L P RGQ+I+V A
Sbjct: 146 WLTERLTERGVKLIHRKVESLEEVARGVDVIINCTGVWAGALQADASLQPGRGQIIQVEA 205
Query: 153 PWLSHFYYLDYD--------VYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCYS 204
PW+ HF L +D Y+IP S VTLGG ++S S D +I + C
Sbjct: 206 PWIKHF-ILTHDPSLGIYNSPYIIPGSK-TVTLGGIFQLGNWSGLNSVRDHNTIWKSCCK 263
Query: 205 LLPRLEEAPVLYEWCGLRPHR----------------SLVIHNYGHGGYGVTTAPGTSRY 248
L P L+ A ++ E G RP R + VIHNYGHGGYG+T G +
Sbjct: 264 LEPTLKNARIVGELTGFRPVRPQVRLEREWLRHGSSSAEVIHNYGHGGYGLTIHWGCAME 323
Query: 249 AVQLVKQALD 258
A L + L+
Sbjct: 324 AANLFGKILE 333
>sp|Q9Z302|OXDA_CRIGR D-amino-acid oxidase OS=Cricetulus griseus GN=DAO PE=2 SV=1
Length = 346
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 113/230 (49%), Gaps = 28/230 (12%)
Query: 54 NLVPVYRDAQPDELVVGNKTYKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSF 113
N V +R P E+ + Y YG ++ +L +E +LPW +R++++G K V SF
Sbjct: 108 NTVLGFRKLTPREMDI-FPDYGYGWFNTSLTLEGKSYLPWLTERLTERGVKLFHRKVESF 166
Query: 114 SGL-ESEFDFVFNCAGLGAQALCRDRKLTPIRGQVIKVWAPWLSHFYYLDYD-------- 164
+ D + NC G+ A AL D L P RGQ+I+V APW+ HF L +D
Sbjct: 167 EEVARGGADVIINCTGVWAGALQADTSLQPGRGQIIQVEAPWMKHF-ILTHDPRLGIYNS 225
Query: 165 VYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRPH 224
Y+IP S VTLGG +++ S HD +I + C L P L+ A ++ E G RP
Sbjct: 226 PYIIPGSK-TVTLGGVFQLGNWNELNSVHDHNTIWKSCCKLEPTLKNAKIVGELTGFRPV 284
Query: 225 RSL----------------VIHNYGHGGYGVTTAPGTSRYAVQLVKQALD 258
R VIHNYGHGGYG+T G + A L + L+
Sbjct: 285 RHQVRLKKKQLHFGSSSVEVIHNYGHGGYGLTIHWGCAMEAANLFGKILE 334
>sp|Q9Z1M5|OXDA_CAVPO D-amino-acid oxidase OS=Cavia porcellus GN=DAO PE=2 SV=1
Length = 347
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 124/251 (49%), Gaps = 30/251 (11%)
Query: 35 GKAMISTYQT--SLLKNASIENLVPVYRDAQPDELVVGNKTYKYGSYSETLVIENSDFLP 92
G A++S Y + + +N+V +R P EL V Y YG + +L+IE +L
Sbjct: 88 GLALVSGYNLFREAVPDPFWKNMVLGFRKLTPRELDV-FPDYGYGWFHTSLIIEGKSYLA 146
Query: 93 WAMKRVSKQGGKFRRGTVSSFSGL-ESEFDFVFNCAGLGAQALCRDRKLTPIRGQVIKVW 151
W +R++++G KF + V S + D + NC G+ A AL D L P RGQ+IKV
Sbjct: 147 WLTERLTERGVKFFQRKVESLEEVARGGADVIINCTGVWAGALQPDPLLQPGRGQIIKVN 206
Query: 152 APWLSHFYYLDYD--------VYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCY 203
APW+ HF L +D Y+IP VTLGG +++ S D +I + C
Sbjct: 207 APWIKHF-ILTHDPERGIYKSPYIIPGIQ-EVTLGGIFQLGNWNEINSTQDHNTIWKGCC 264
Query: 204 SLLPRLEEAPVLYEWCGLRPHR----------------SLVIHNYGHGGYGVTTAPGTSR 247
SL P L A ++ E+ G RP R + VIHNYGHGGYG+T G +
Sbjct: 265 SLEPTLRNARIVGEYTGFRPVRPQLRLEREQLRVGSANTEVIHNYGHGGYGLTIHWGCAL 324
Query: 248 YAVQLVKQALD 258
A +L + L+
Sbjct: 325 EAAKLFGKILE 335
>sp|A2V9Y8|OXDA_MACFA D-amino-acid oxidase OS=Macaca fascicularis GN=DAO PE=2 SV=1
Length = 347
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 123/250 (49%), Gaps = 28/250 (11%)
Query: 35 GKAMISTYQT--SLLKNASIENLVPVYRDAQPDELVVGNKTYKYGSYSETLVIENSDFLP 92
G +IS Y + N S ++ V +R P EL + Y YG + +L++E ++L
Sbjct: 88 GLFLISGYNLFHEAIPNPSWKDTVLGFRKLTPRELDI-FPDYSYGWFHTSLILEGKNYLQ 146
Query: 93 WAMKRVSKQGGKFRRGTVSSFSGLESE-FDFVFNCAGLGAQALCRDRKLTPIRGQVIKVW 151
W +R++++G KF + V SF + E D + NC G+ A L D L P RGQ+IKV
Sbjct: 147 WLTERLTERGVKFFQRKVESFEEVAREGADVIVNCTGVWAGVLQPDPLLQPGRGQIIKVD 206
Query: 152 APWLSHFYY-------LDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCYS 204
APW+ HF + Y+IP + VTLGG +++ + D +I E C
Sbjct: 207 APWIKHFILTHEPESGIYNSPYIIPGTQ-TVTLGGIFQLGNWNELNNIQDHNTIWEGCCR 265
Query: 205 LLPRLEEAPVLYEWCGLRPHR----------------SLVIHNYGHGGYGVTTAPGTSRY 248
L P L+ A ++ E G RP R + VIHNYGHGGYG+T G +
Sbjct: 266 LEPTLKNARIVDERTGFRPVRPKIRLEREQLRVGPSNTEVIHNYGHGGYGLTIHWGCALE 325
Query: 249 AVQLVKQALD 258
A +L + L+
Sbjct: 326 AAKLFGRILE 335
>sp|P31228|OXDD_BOVIN D-aspartate oxidase OS=Bos taurus GN=DDO PE=1 SV=2
Length = 341
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 59 YRDAQPDELVVGNKTYKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLES 118
+R DEL + + +G TL E +LPW KRV GG + L
Sbjct: 116 FRKMTKDELKKFPQ-HVFGHAFTTLKCEGPAYLPWLQKRVKGNGGLILTRRIEDLWELHP 174
Query: 119 EFDFVFNCAGLGAQALCRDRKLTPIRGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLG 178
FD V NC+GLG++ L D K+ P+RGQV+KV APW+ HF + I VTLG
Sbjct: 175 SFDIVVNCSGLGSRQLAGDSKIFPVRGQVLKVQAPWVKHFIRDSSGLTYIYPGVSNVTLG 234
Query: 179 GCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRPHRS------------ 226
G R ++ + IL RC +L P L A L E GLRP R
Sbjct: 235 GTRQKGDWNLSPDAEISKEILSRCCALEPSLRGAYDLREKVGLRPTRPSVRLEKELLAQD 294
Query: 227 ----LVIHNYGHGGYGVTTAPGTSRYAVQLVKQALDP--TSSLKSKL 267
V+H+YGHG G+ GT+ A +LV + + T + KSKL
Sbjct: 295 SRRLPVVHHYGHGSGGIAMHWGTALEATRLVNECVQVLRTPAPKSKL 341
>sp|P00371|OXDA_PIG D-amino-acid oxidase OS=Sus scrofa GN=DAO PE=1 SV=2
Length = 347
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 47/260 (18%)
Query: 49 NASIENLVPV-----YRDAQPD----ELVVGNKT-----------YKYGSYSETLVIENS 88
NA+ L PV +R+A PD ++V+G + Y+YG ++ +L++E
Sbjct: 83 NAANMGLTPVSGYNLFREAVPDPYWKDMVLGFRKLTPRELDMFPDYRYGWFNTSLILEGR 142
Query: 89 DFLPWAMKRVSKQGGKFRRGTVSSFSGL-ESEFDFVFNCAGLGAQALCRDRKLTPIRGQV 147
+L W +R++++G KF V SF + D + NC G+ A L D L P RGQ+
Sbjct: 143 KYLQWLTERLTERGVKFFLRKVESFEEVARGGADVIINCTGVWAGVLQPDPLLQPGRGQI 202
Query: 148 IKVWAPWLSHFYYLDYDV--------YVIPHSNGAVTLGGCRHYDSYSRDISRHDTASIL 199
IKV APWL +F + +D+ Y+IP AVTLGG +++ + D +I
Sbjct: 203 IKVDAPWLKNF-IITHDLERGIYNSPYIIPGLQ-AVTLGGTFQVGNWNEINNIQDHNTIW 260
Query: 200 ERCYSLLPRLEEAPVLYEWCGLRPHR----------------SLVIHNYGHGGYGVTTAP 243
E C L P L++A ++ E+ G RP R + VIHNYGHGGYG+T
Sbjct: 261 EGCCRLEPTLKDAKIVGEYTGFRPVRPQVRLEREQLRFGSSNTEVIHNYGHGGYGLTIHW 320
Query: 244 GTSRYAVQLVKQALDPTSSL 263
G + +L + L+ + L
Sbjct: 321 GCALEVAKLFGKVLEERNLL 340
>sp|Q99489|OXDD_HUMAN D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV=1
Length = 341
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 74 YKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLESEFDFVFNCAGLGAQA 133
Y +G TL E +LPW KR+ GG + L FD V NC+GLG++
Sbjct: 130 YVFGQAFTTLKCECPAYLPWLEKRIKGSGGWTLTRRIEDLWELHPSFDIVVNCSGLGSRQ 189
Query: 134 LCRDRKLTPIRGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRH 193
L D K+ P+RGQV++V APW+ HF + I VTLGG R ++
Sbjct: 190 LAGDSKIFPVRGQVLQVQAPWVEHFIRDGSGLTYIYPGTSHVTLGGTRQKGDWNLSPDAE 249
Query: 194 DTASILERCYSLLPRLEEAPVLYEWCGLRPHRS----------------LVIHNYGHGGY 237
++ IL RC +L P L A + E GLRP+R V+H+YGHG
Sbjct: 250 NSREILSRCCALEPSLHGACNIREKVGLRPYRPGVRLQTELLARDGQRLPVVHHYGHGSG 309
Query: 238 GVTTAPGTSRYAVQLVKQAL 257
G++ GT+ A +LV + +
Sbjct: 310 GISVHWGTALEAARLVSECV 329
>sp|A3KCL7|OXDD_PIG D-aspartate oxidase OS=Sus scrofa GN=DDO PE=2 SV=1
Length = 341
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 77 GSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLESEFDFVFNCAGLGAQALCR 136
G TL E +LPW KRV GG V L FD V NC+GLG++ L
Sbjct: 133 GQAFTTLKYEGPTYLPWLEKRVKGSGGLVLTRRVEDLWELHPSFDIVVNCSGLGSKQLVG 192
Query: 137 DRKLTPIRGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRHDTA 196
D + P+RGQV+KV APW+ HF + I VTLGG R ++ + +
Sbjct: 193 DMDIFPVRGQVLKVQAPWVKHFIRDGSGLTYIYPGLANVTLGGTRQKGDWNLSPNAEISK 252
Query: 197 SILERCYSLLPRLEEAPVLYEWCGLRP----------------HRSLVIHNYGHGGYGVT 240
IL RC +L P L A + E GLRP R V+HNYGHG G+
Sbjct: 253 QILSRCCALEPSLRGACDIREKVGLRPSRPGVRLEKELLVQGSQRLPVVHNYGHGSGGIA 312
Query: 241 TAPGTSRYAVQLVKQALDP--TSSLKSKL 267
GT+ A +LV + + T + KSKL
Sbjct: 313 MHWGTALEAARLVSECVQALRTPAPKSKL 341
>sp|Q922Z0|OXDD_MOUSE D-aspartate oxidase OS=Mus musculus GN=Ddo PE=2 SV=1
Length = 341
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 74 YKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLESEFDFVFNCAGLGAQA 133
Y +G TL E S +LPW +R+ GG + L+ FD V NC+GLG++
Sbjct: 130 YVFGQAFTTLKCETSAYLPWLERRIKGSGGLLLTRRIEDLWELQPSFDIVVNCSGLGSRR 189
Query: 134 LCRDRKLTPIRGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRH 193
L D ++P+RGQV++ APW+ HF + + VTLGG R ++R
Sbjct: 190 LVGDPMISPVRGQVLQARAPWVKHFIRDGGGLTYVYPGMSYVTLGGTRQKGDWNRSPDAE 249
Query: 194 DTASILERCYSLLPRLEEAPVLYEWCGLRPHRS----------------LVIHNYGHGGY 237
+ I RC +L P L A + E GLRP R V+HNYGHG
Sbjct: 250 LSREIFSRCCTLEPSLHRAYDIKEKVGLRPSRPGVRLQKEILVRGQQTLPVVHNYGHGSG 309
Query: 238 GVTTAPGTSRYAVQLVKQAL 257
G++ G++ A +LV + +
Sbjct: 310 GISVHWGSALEATRLVMECI 329
>sp|Q95XG9|OXDA2_CAEEL D-amino-acid oxidase 2 OS=Caenorhabditis elegans GN=Y69A2AR.5 PE=1
SV=2
Length = 322
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 17/245 (6%)
Query: 27 KFSADGSTGKAMISTYQTSLLKNA----SIENLVPVYRDAQPDELVVGNKTYKYGSYSET 82
++ ADG+ G S Y +K+ + V + DA+ + V +K+G + T
Sbjct: 74 EYQADGNPGAEEQSGYWLQSVKSEPKWLKLMKNVHILTDAEMKQ-VARRPEHKFGIFYTT 132
Query: 83 LVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLESEFDFVFNCAGLGAQALCRDRKLTP 142
+E + ++ W + K GGKF++ + + + +D NC GLG++AL D+++ P
Sbjct: 133 WYLEPTPYIKWCTDKFLKNGGKFKKQKIENIDDVARSYDVTVNCTGLGSRALIGDKEVYP 192
Query: 143 IRGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERC 202
RGQ++KV P + HF ++D D Y ++ +TLGG + I+ + IL+
Sbjct: 193 TRGQILKVSCPRVKHF-FID-DKYYALLNDSTITLGGTFEAHQWDLTINSELSQKILKEN 250
Query: 203 YSLLPRLEEAPVLYEWCGLRPHRSLV----------IHNYGHGGYGVTTAPGTSRYAVQL 252
+P L A +L +RP R V +HNYGHGG G+T G + ++
Sbjct: 251 IHNIPSLRTAQILSSHVDMRPSRGTVRLQAELGRSLVHNYGHGGSGITLHWGCALECAEI 310
Query: 253 VKQAL 257
V+ L
Sbjct: 311 VENVL 315
>sp|A8XJ44|OXDA2_CAEBR D-amino-acid oxidase 2 OS=Caenorhabditis briggsae GN=CBG13882 PE=3
SV=1
Length = 329
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 ELVVGNKTYKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLESEF---DF 122
++V +K+G + T +E + ++ W + K GGK + + +E EF D
Sbjct: 118 KMVAKRPEHKFGIFYTTWYLEPTPYIKWESDKFLKNGGKIKNSKIQKIEDVEKEFGLFDV 177
Query: 123 VFNCAGLGAQALCRDRKLTPIRGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLGGCRH 182
+ NC G+GA+ L D ++ P RGQ++KV P + HF ++D Y + ++ +TLGG
Sbjct: 178 ILNCTGIGARHLIGDNEVFPTRGQILKVKCPSVKHF-FIDDQFYAL-LNDTTITLGGTAD 235
Query: 183 YDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRPHR----------SLVIHNY 232
+ R I+ + I + +P L A V+ LRP R S VIHN
Sbjct: 236 RHQWDRTINPKISEKIFQENCKNIPSLRSAQVISSHVDLRPSRVTVRLEAEPDSKVIHNN 295
Query: 233 GHGGYGVTTAPGTSRYAVQLVKQAL 257
GHGG G+T G + V+LVK+ L
Sbjct: 296 GHGGSGITLHWGCALECVELVKKVL 320
>sp|O45307|OXDD2_CAEEL D-aspartate oxidase 2 OS=Caenorhabditis elegans GN=C47A10.5 PE=1
SV=2
Length = 334
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 21/195 (10%)
Query: 86 ENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLESE-FDFVFNCAGLGAQALC-RDRKLTPI 143
E + ++P+ + +G +F V L +E +D + NCAGL L D + PI
Sbjct: 139 EGNKYVPYLKFQCQARGVEFLHRKVRDLEELANEGYDVIVNCAGLSGGTLAGDDDSVYPI 198
Query: 144 RGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCY 203
RG V+ V A W HF Y D+ + IP N +V +G + + + +I+ D ILER
Sbjct: 199 RGVVLDVEAHWHKHFNYKDFITFTIPKEN-SVVIGSVKQENRWDLEITDVDRKDILERYV 257
Query: 204 SLLPRLEEAPVLYEWCGLRPHRS------------------LVIHNYGHGGYGVTTAPGT 245
+L P + E +L EW GLRP R V+H+YGHGG G T GT
Sbjct: 258 ALHPAMREPKILGEWSGLRPARKTIRIEKVEKKSEKSGKKYTVVHHYGHGGNGFTLGWGT 317
Query: 246 SRYAVQLVKQALDPT 260
+ A +LVK AL+ +
Sbjct: 318 AVEATKLVKSALNSS 332
>sp|A8WXM1|OXDD1_CAEBR D-aspartate oxidase 1 OS=Caenorhabditis briggsae GN=CBG04460 PE=3
SV=1
Length = 331
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 21/192 (10%)
Query: 86 ENSDFLPWAMKRVSKQGGKFRRGTVSSFSGL-ESEFDFVFNCAGL-GAQALCRDRKLTPI 143
E + ++P+ + + +Q +F++ V + + ++ +D + NCAGL G + D + PI
Sbjct: 139 EGNKYVPYLKRLLLEQKVEFQQKNVENLDTIADAGYDVIVNCAGLYGGKLAGDDDQCYPI 198
Query: 144 RGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCY 203
RG +++V APW HF Y D+ + IP N +V +G + + + +I+ D IL R
Sbjct: 199 RGVILEVDAPWHKHFNYRDFTTFTIPKEN-SVVIGSTKQDNRWDLEITDEDRNDILSRYI 257
Query: 204 SLLPRLEEAPVLYEWCGLRPHRS------------------LVIHNYGHGGYGVTTAPGT 245
L P + E +L EW LRP R V+H+YGHG G T GT
Sbjct: 258 ELHPGMREPKILKEWSALRPGRKHVRIESQQRKTTETGKEYTVVHHYGHGSNGFTLGWGT 317
Query: 246 SRYAVQLVKQAL 257
+ A +LVK+AL
Sbjct: 318 AIEATKLVKKAL 329
>sp|Q19564|OXDD1_CAEEL D-aspartate oxidase 1 OS=Caenorhabditis elegans GN=F18E3.7 PE=1
SV=1
Length = 334
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 21/192 (10%)
Query: 86 ENSDFLPWAMKRVSKQGGKFRRGTVSSFSGL-ESEFDFVFNCAGL-GAQALCRDRKLTPI 143
E + ++P+ + +Q +F++ V+S + ++ +D + NCAGL G + D PI
Sbjct: 142 EGNKYVPYLKNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGDDDTCYPI 201
Query: 144 RGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCY 203
RG +++V APW HF Y D+ + IP + +V +G + + + +I+ D IL+R
Sbjct: 202 RGVILEVDAPWHKHFNYRDFTTFTIPKEH-SVVVGSTKQDNRWDLEITDEDRNDILKRYI 260
Query: 204 SLLPRLEEAPVLYEWCGLRPHRS------------------LVIHNYGHGGYGVTTAPGT 245
+L P + E ++ EW LRP R +V+H+YGHG G T GT
Sbjct: 261 ALHPGMREPKIIKEWSALRPGRKHVRIEAQKRTSVGNSKDYMVVHHYGHGSNGFTLGWGT 320
Query: 246 SRYAVQLVKQAL 257
+ A +LVK AL
Sbjct: 321 AIEATKLVKTAL 332
>sp|O01739|OXDA1_CAEEL Putative D-amino-acid oxidase 1 OS=Caenorhabditis elegans
GN=F20H11.5 PE=1 SV=1
Length = 383
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Query: 54 NLVPVYRDAQPDELV-------VGNKTYKYGSYSETLVIENSDFLPWAMKRVSKQGGKFR 106
+LV YRD EL + T G + E F P+ K + +G +F
Sbjct: 127 SLVYNYRDLAEPELFGPTSLFDLPRNTTTRGIHYTAYTSEGLRFCPFLKKELMTKGVRFT 186
Query: 107 RGTVSSFSGLESEFDFVFNCAGLGAQALCRDR--KLTPIRGQVIKVWAPWLSHFYYLDYD 164
+ + + L +EFD V N AGL L D + PIRG +I+V APW HF Y D+
Sbjct: 187 QRRIGNLEELGAEFDVVVNSAGLLGGVLAGDDAGNMKPIRGVLIRVDAPWQKHFLYRDFS 246
Query: 165 VYVIPHSNGAVTLGGCRHYDSYS-RDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRP 223
IP + V +G + ++ +++ D I R +L P + +L + G RP
Sbjct: 247 TITIPVID-HVYMGTVKQEGAFGPNNVTSADIQDITSRYVALQPSFKRVHMLSSFVGYRP 305
Query: 224 HRS-----------------LVIHNYGHGGYGVTTAPGTSRYAVQLV 253
R V+HNYGH G G T G++ +A +V
Sbjct: 306 GRKQVRVEKQIRETNGSKKFTVVHNYGHSGNGFTLGYGSAVHAAHIV 352
>sp|Q556W1|OXDD_DICDI D-aspartate oxidase OS=Dictyostelium discoideum GN=ddo-1 PE=3 SV=1
Length = 346
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 59 YRDAQPDELVVGNKTYKYG-SYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLE 117
+R A+ DEL G Y G + + V++ ++ + + + GG + +
Sbjct: 121 FRRARKDELPDG---YVDGYAIDDGFVMDTDMYMDYLVDQFKSLGGIIEQRHLVDIREAF 177
Query: 118 SEFDFVFNCAGLGAQALCRDRKLTPIRGQVIKVW-APWLSHFYYLDYDVYVIPHSNGAVT 176
+ D V NC GLG++ L DR + P RGQ+I + + S D+ YVIP V
Sbjct: 178 VDHDVVVNCTGLGSRELFNDRTIYPGRGQIIVIKNSTDRSIMDEEDHIAYVIPRLTNTV- 236
Query: 177 LGGCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWC--GLRPHR--------- 225
LGG Y+ + ++ DT IL+R + PR + + + GLRP R
Sbjct: 237 LGGTNQEHDYNTNPTKKDTEEILKRVAMISPRFAKNRIEIQGVKVGLRPARHEIRLENEF 296
Query: 226 -----SLVIHNYGHGGYGVTTAPGTSRYAVQLVKQAL 257
LV+HNYGHGG G T + G + A++LV Q L
Sbjct: 297 FEGGSKLVVHNYGHGGSGFTVSWGCAIEAIKLVDQGL 333
>sp|O07727|DAO_MYCTU Probable D-amino-acid oxidase OS=Mycobacterium tuberculosis GN=aao
PE=3 SV=1
Length = 320
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 54 NLVPVYRDAQPDELVVGNKTYKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSF 113
L+P R A P ++ G ++ G ++ +I+ +L +R++ G + + S
Sbjct: 106 ELIPDVRPADPADVPGG---FRAGFHATLPMIDMPQYLDCLTQRLAATGCEIETRPLRSL 162
Query: 114 SGLESEFDFVFNCAGLGAQALCRDRKLTPIRGQVIKVWAPWLSHFYYL-----DYDVYVI 168
+ V NCAGLGA+ L D + P GQ + + P L + ++ Y
Sbjct: 163 AEAAEAAPIVINCAGLGARELAGDATVWPRFGQHVVLTNPGLEQLFIERTGGSEWICYFA 222
Query: 169 PHSNGAVTLGGCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRPHR--- 225
H V GG + T IL+RC + PRL EA V+ GLRP R
Sbjct: 223 -HPQ-RVVCGGISIPGRWDPTPEPEITERILQRCRRIQPRLAEAAVIETITGLRPDRPSV 280
Query: 226 ---------SLVIHNYGHGGYGVTTAPGTSRYAVQLV 253
+L IHNYGHGG GVT + G +R V LV
Sbjct: 281 RVEAEPIGRALCIHNYGHGGDGVTLSWGCAREVVNLV 317
>sp|Q9Y7N4|OXDA_SCHPO D-amino-acid oxidase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dao1 PE=3 SV=1
Length = 348
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 76 YGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGL---ESEFDFVFNCAGLGAQ 132
YG + T +I +L + K + + G +F + +S E VFNC GL A
Sbjct: 134 YGHKATTFLINAPHYLNYMYKLLIEAGVEFEKKELSHIKETVEETPEASVVFNCTGLWAS 193
Query: 133 AL--CRDRKLTPIRGQVIKVWAPWLSHFYYLD---YDVYVIPHS-NGAVTLGGCRHYDSY 186
L D + P RG V+ V AP ++ L+ D Y+IP NG V GG ++
Sbjct: 194 KLGGVEDPDVYPTRGHVVLVKAPHVTETRILNGKNSDTYIIPRPLNGGVICGGFMQPGNW 253
Query: 187 SRDISRHDTASILERCYSLLPRL------EEAPVLYEWCGLRPHRS-------------- 226
R+I DT IL+R +L+P L E A ++ E G RP R
Sbjct: 254 DREIHPEDTLDILKRTSALMPELFHGKGPEGAEIIQECVGFRPSRKGGARVELDVVPGTS 313
Query: 227 -LVIHNYGHGGYGVTTAPGTSRYAVQL 252
++H+YG G G G + +V L
Sbjct: 314 VPLVHDYGASGTGYQAGYGMALDSVML 340
>sp|Q99042|OXDA_TRIVR D-amino-acid oxidase OS=Trigonopsis variabilis GN=DAO1 PE=3 SV=1
Length = 356
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 33/209 (15%)
Query: 82 TLVIENSDFLPWAMKRVSKQGGKFRRGTVSSFSGLE------SEFDFVFNCAGLGAQAL- 134
++ I +L W M + G + V+ S D + NC+GL A+ L
Sbjct: 143 SVCIHTGVYLNWLMSQCLSLGATVVKRRVNHIKDANLLHSSGSRPDVIVNCSGLFARFLG 202
Query: 135 -CRDRKLTPIRGQVIKVW--APWLSHFYYL------DYDVYVIPHSNGAVTLGGCRHYDS 185
D+K+ PIRGQV+ V P+++ F D +Y++ +G +GGC ++
Sbjct: 203 GVEDKKMYPIRGQVVLVRNSLPFMASFSSTPEKENEDEALYIMTRFDGTSIIGGCFQPNN 262
Query: 186 YSRDISRHDTASILERCYSLLPRL-EEAP--VLYEWCGLRPHRS--------------LV 228
+S + T IL R P L ++ P ++ E G RP R V
Sbjct: 263 WSSEPDPSLTHRILSRALDRFPELTKDGPLDIVRECVGHRPGREGGPRVELEKIPGVGFV 322
Query: 229 IHNYGHGGYGVTTAPGTSRYAVQLVKQAL 257
+HNYG G G ++ G + AV V++AL
Sbjct: 323 VHNYGAAGAGYQSSYGMADEAVSYVERAL 351
>sp|P24552|OXDA_FUSSO D-amino-acid oxidase OS=Fusarium solani subsp. pisi PE=1 SV=1
Length = 361
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 42/270 (15%)
Query: 34 TGKAMISTYQTSLL-KNASIENLVPVYRDAQPDELVVGNKTYKYGSYSETLVIENSDFLP 92
T KA S + +L K +N+ +R+ P E++ G Y G ++ I + +LP
Sbjct: 98 TEKAQRSGFPDALFSKEPWFKNMFEDFREQHPSEVIPG---YDSGCEFTSVCINTAIYLP 154
Query: 93 WAMKRVSKQGGKFRRGTVSSFSGLES------EFDFVFNCAGLGAQAL--CRDRKLTPIR 144
W + + K G +R ++ S + + + N GLG+ L D+ + P R
Sbjct: 155 WLLGQCIKNGVIVKRAILNDISEAKKLSHAGKTPNIIVNATGLGSYKLGGVEDKTMAPAR 214
Query: 145 GQVIKVW---APWLSHFYYLD--YDVYVIPH--SNGAVTLGGCRHYDSYSRDISRHDTAS 197
GQ++ V +P L D DV + + G LGG ++ +
Sbjct: 215 GQIVVVRNESSPMLLTSGVEDGGADVMYLMQRAAGGGTILGGTYDVGNWESQPDPNIANR 274
Query: 198 ILERCYSLLPRLEEAP------VLYEWCGLRPHR--------------SLVIHNYGHGGY 237
I++R + P + V+ G+RP R + ++HNYGH G+
Sbjct: 275 IMQRIVEVRPEIANGKGVKGLSVIRHAVGMRPWRKDGVRIEEEKLDDETWIVHNYGHSGW 334
Query: 238 GVTTAPGTSRYAVQLVKQALDPTSSLKSKL 267
G + G + VQLV + + KSKL
Sbjct: 335 GYQGSYGCAENVVQLVDKV---GKAAKSKL 361
>sp|P80324|OXDA_RHOTO D-amino-acid oxidase OS=Rhodosporidium toruloides GN=DAO1 PE=1 SV=1
Length = 368
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 74/186 (39%), Gaps = 19/186 (10%)
Query: 53 ENLVPVYRDAQPDELVVGNKTYKYGSYSETLVIENSDFLPWAMKRVSKQGGKFRRGTVSS 112
+++ P YR E G Y +TL + + + + + K G F R TV+S
Sbjct: 109 KDITPNYRPLPSSECPPGAIGVTY----DTLSVHAPKYCQYLARELQKLGATFERRTVTS 164
Query: 113 FSGLESEFDFVFNCAGLGAQALC--RDRKLTPIRGQVIKVWAPWLSHFYYLDYD-----V 165
D V N GLGA+++ D+ PIRGQ + V +P +D
Sbjct: 165 LEQAFDGADLVVNATGLGAKSIAGIDDQAAEPIRGQTVLVKSP--CKRCTMDSSDPASPA 222
Query: 166 YVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCYSLLP------RLEEAPVLYEWC 219
Y+IP G V GG + ++ IL+ C L P +E VL
Sbjct: 223 YIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNV 282
Query: 220 GLRPHR 225
GLRP R
Sbjct: 283 GLRPAR 288
>sp|O31616|GLOX_BACSU Glycine oxidase OS=Bacillus subtilis (strain 168) GN=thiO PE=1 SV=1
Length = 369
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 127 AGLGAQALCRDRKLTPIRGQVIKVW---APWLSHFYYLDYDVYVIPHSNGAVTLGGCRHY 183
+G+ + L + P++G+ + VW P L+ Y D+ Y++P +G + +G
Sbjct: 206 SGMFFKQLGLNNAFLPVKGECLSVWNDDIP-LTKTLYHDH-CYIVPRKSGRLVVGATMKP 263
Query: 184 DSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLR-------------PHRSLVIH 230
+S S++++ ++LP ++ V W GLR P S ++
Sbjct: 264 GDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILF 323
Query: 231 NYGHGGYGVTTAPGTSRYAVQLV 253
GH G+ AP T L+
Sbjct: 324 AAGHFRNGILLAPATGALISDLI 346
>sp|Q479B1|DADA_DECAR D-amino acid dehydrogenase small subunit OS=Dechloromonas aromatica
(strain RCB) GN=dadA PE=3 SV=1
Length = 418
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 177 LGGCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRP------------- 223
+ G ++ Y+ +++ ++++R L PRLE WCGLRP
Sbjct: 316 IAGTAEFNGYNLELNPVRCQALIDRTRQLFPRLEIVGEPTLWCGLRPATPSNVPYIGQTR 375
Query: 224 HRSLVIHNYGHGGYGVTTAPGTSRYAVQLV 253
+R+L + N GHG G T A G++ +++
Sbjct: 376 YRNLWL-NTGHGTLGWTMACGSAASLAEMI 404
>sp|P33642|Y4548_PSEAE Probable D-amino acid oxidase PA4548 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=PA4548 PE=3 SV=3
Length = 364
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 20/156 (12%)
Query: 117 ESEFDFVFNCAGLGAQALCR----DRKLTPIRGQVI--KVWAPWLSHFYYLDYDVYVIPH 170
E D V AG + L + + + P++GQ+I K A +L L Y IP
Sbjct: 192 EIRGDKVLLAAGAWSGELLKPLGLELPVVPVKGQMILYKCAADFLPRMV-LAKGRYAIPR 250
Query: 171 SNGAVTLGGCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGLRPHRSLVIH 230
+G + +G + + + + S+ LLP L + + W GLRP I
Sbjct: 251 RDGHILIGSTLEHSGFDKTPTDEAQESLRASAAELLPELADMQPVAHWAGLRPGSPEGIP 310
Query: 231 -------------NYGHGGYGVTTAPGTSRYAVQLV 253
N GH G+ AP + R L+
Sbjct: 311 YIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLM 346
>sp|A8FUW4|CMOA_SHESH tRNA (cmo5U34)-methyltransferase OS=Shewanella sediminis (strain
HAW-EB3) GN=cmoA PE=3 SV=1
Length = 243
Score = 38.1 bits (87), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 118 SEFDFVFNCAGLGAQALCRDRKLTPIRGQVIKVWAPWLSHFYYLDYDVYVIPHSNGAVTL 177
S+F F AG+ + R+ P GQ+I + + + D ++Y + S GA TL
Sbjct: 17 SDFQFDEKVAGVFNDMI---RRSVPGYGQIINTLGDFANQYVTTDSNIYDLGCSLGAATL 73
Query: 178 GGCRHYDSYS-RDISRHDTASILERCY-SLLPRLEEAPVLYEWCGLR----PHRSLVIHN 231
RH D+ + + I+ ++ S+++RC +L + E PV +R + S+V+ N
Sbjct: 74 SIRRHIDNRNCKIIAVDNSESMIQRCRENLSAYVSETPVDLVCGDIRDIKIENASMVVLN 133
Query: 232 Y 232
+
Sbjct: 134 F 134
>sp|Q3M859|THIOG_ANAVT Bifunctional protein ThiO/ThiG OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=thiO/thiG PE=3 SV=1
Length = 652
Score = 37.7 bits (86), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 140 LTPIRGQVIKVWAPW------LSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRH 193
+TP +GQ+++V P L + + ++Y++P + ++ +G ++ +
Sbjct: 214 VTPRKGQMLRVRVPESVPELPLKRVLFGE-NIYIVPRRDRSIIIGATSEDVGFTPHNTPA 272
Query: 194 DTASILERCYSLLPRLEEAPVLYEWCGLRP------------HRSLVIHNYGHGGYGVTT 241
++L+ L P+L++ P+ W G RP H + + GH G+
Sbjct: 273 GIQTLLQGAIRLYPQLQDYPIQEFWWGFRPATPDELPILGTSHCANLTLATGHYRNGILL 332
Query: 242 APGTSRYAVQ-LVKQALDPTSS 262
AP T+ +V+Q DP S
Sbjct: 333 APITAALIADFIVEQKSDPLLS 354
>sp|G3XD12|HCNC_PSEAE Hydrogen cyanide synthase subunit HcnC OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=hcnC PE=1 SV=1
Length = 417
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 103 GKFRRGTVSSFSGLESEFDFVFNC-----------AGLGAQALCRDRKLTPIRGQVIKVW 151
G R+G SG+ ++ V +C A L A R + P++GQ++
Sbjct: 215 GVLRQG--RRISGVRTDNAGVLHCRTLINAAGAWAAELSEMATGRRIPVKPVKGQIVLTE 272
Query: 152 -APWLSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCYSLLPRLE 210
P L + D Y+ NG + +G + + + A +++ +P L+
Sbjct: 273 RMPRLLNGCLTTSDCYMAQKDNGEILIGSTTEDKGFDVSNTFPEIAGLVQGAVRCVPELQ 332
Query: 211 EAPVLYEWCGLRP 223
+ + W GLRP
Sbjct: 333 QVNLKRTWAGLRP 345
>sp|Q8YRC9|THIOG_NOSS1 Bifunctional protein ThiO/ThiG OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=thiO/thiG PE=3 SV=1
Length = 652
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 20/142 (14%)
Query: 140 LTPIRGQVIKVWAPW------LSHFYYLDYDVYVIPHSNGAVTLGGCRHYDSYSRDISRH 193
+TP +GQ++++ P L + ++Y++P ++ +G ++ +
Sbjct: 214 VTPRKGQMLRLRVPESVPELPLKRVLF-GKNIYIVPRRERSIIVGATSEDVGFTPHNTPA 272
Query: 194 DTASILERCYSLLPRLEEAPVLYEWCGLRP------------HRSLVIHNYGHGGYGVTT 241
++L+ L P+L++ P+ W G RP H + GH G+
Sbjct: 273 GIQTLLQGAIRLYPQLQDYPIQEFWWGFRPATPDELPILGTSHCPNLTLATGHYRNGILL 332
Query: 242 APGTSRYAVQL-VKQALDPTSS 262
AP T+ L V+Q DP S
Sbjct: 333 APITAALIADLIVEQKSDPLLS 354
>sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1
SV=2
Length = 920
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 1 MGFPVISVDASVQNEDGSRTLTLSQTKFSADGSTG 35
MGFP+I V+A +D R L LSQ KF A G G
Sbjct: 502 MGFPLIYVEAEQVEDD--RVLKLSQKKFCASGPYG 534
>sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1
SV=2
Length = 919
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 1 MGFPVISVDASVQNEDGSRTLTLSQTKFSADGS 33
MGFP+I V+A +D R L LSQ KF A GS
Sbjct: 501 MGFPLIYVEAEQVEDD--RLLRLSQKKFCAGGS 531
>sp|O85228|HCNC_PSEFL Hydrogen cyanide synthase subunit HcnC OS=Pseudomonas fluorescens
GN=hcnC PE=2 SV=1
Length = 417
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 12/122 (9%)
Query: 114 SGLESEFDFVFNC-----------AGLGAQALCRDRKLTPIRGQVIKVW-APWLSHFYYL 161
SG++++ +F C A L QA + + P++GQ++ P L +
Sbjct: 224 SGVKTDVAGLFRCTTLINAAGAWAAELSLQATGIEIPVKPVKGQILLTERMPKLLNGCLT 283
Query: 162 DYDVYVIPHSNGAVTLGGCRHYDSYSRDISRHDTASILERCYSLLPRLEEAPVLYEWCGL 221
D Y+ NG + +G + + + +++ +P L + W GL
Sbjct: 284 TSDCYMAQKDNGEILIGSTTEDKGFDVTTTYPEINGLVQGAVRCVPELAHVNLKRCWAGL 343
Query: 222 RP 223
RP
Sbjct: 344 RP 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,884,373
Number of Sequences: 539616
Number of extensions: 4103802
Number of successful extensions: 8934
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8848
Number of HSP's gapped (non-prelim): 37
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)