Query psy5266
Match_columns 180
No_of_seqs 148 out of 1718
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 21:59:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5266.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5266hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kb6_A D-lactate dehydrogenase 100.0 1.1E-30 3.9E-35 220.7 5.0 129 11-139 149-302 (334)
2 3k5p_A D-3-phosphoglycerate de 99.9 8E-27 2.7E-31 201.9 13.2 142 11-152 164-329 (416)
3 3hg7_A D-isomer specific 2-hyd 99.9 7.4E-27 2.5E-31 196.6 11.7 123 11-133 148-277 (324)
4 3pp8_A Glyoxylate/hydroxypyruv 99.9 5.2E-27 1.8E-31 196.9 9.6 123 11-133 147-276 (315)
5 3evt_A Phosphoglycerate dehydr 99.9 2E-26 6.9E-31 194.0 10.7 123 11-133 145-274 (324)
6 4g2n_A D-isomer specific 2-hyd 99.9 2.8E-26 9.4E-31 194.6 10.8 122 11-133 181-309 (345)
7 3jtm_A Formate dehydrogenase, 99.9 5.3E-26 1.8E-30 193.2 11.7 123 11-133 172-303 (351)
8 2yq5_A D-isomer specific 2-hyd 99.9 2.8E-26 9.5E-31 194.4 9.5 129 11-139 156-306 (343)
9 4hy3_A Phosphoglycerate oxidor 99.9 8.8E-26 3E-30 192.7 11.1 122 11-133 184-312 (365)
10 1sc6_A PGDH, D-3-phosphoglycer 99.9 1.2E-25 4.2E-30 194.2 11.8 142 11-152 153-318 (404)
11 3gg9_A D-3-phosphoglycerate de 99.9 1.2E-25 4E-30 191.2 10.1 123 11-133 168-298 (352)
12 2pi1_A D-lactate dehydrogenase 99.9 3.3E-26 1.1E-30 193.3 4.0 123 11-133 149-292 (334)
13 4dgs_A Dehydrogenase; structur 99.9 5.8E-25 2E-29 186.1 8.7 121 11-133 179-304 (340)
14 4e5n_A Thermostable phosphite 99.9 3.4E-25 1.2E-29 186.9 5.8 123 11-133 153-290 (330)
15 2nac_A NAD-dependent formate d 99.9 5.8E-24 2E-28 183.0 11.9 123 11-133 199-330 (393)
16 2j6i_A Formate dehydrogenase; 99.9 6.2E-24 2.1E-28 181.3 10.3 123 11-133 172-309 (364)
17 1dxy_A D-2-hydroxyisocaproate 99.9 2.5E-24 8.6E-29 181.7 7.4 123 11-133 153-293 (333)
18 1xdw_A NAD+-dependent (R)-2-hy 99.9 4.1E-24 1.4E-28 180.2 8.6 123 11-133 154-295 (331)
19 3gvx_A Glycerate dehydrogenase 99.9 1.3E-23 4.5E-28 174.3 10.9 119 11-133 130-253 (290)
20 1j4a_A D-LDH, D-lactate dehydr 99.9 6.7E-24 2.3E-28 179.1 6.6 123 11-133 154-295 (333)
21 1qp8_A Formate dehydrogenase; 99.9 2.8E-23 9.7E-28 173.3 9.4 121 11-133 132-258 (303)
22 3oet_A Erythronate-4-phosphate 99.9 2.4E-23 8.3E-28 178.3 6.3 120 11-133 127-255 (381)
23 2g76_A 3-PGDH, D-3-phosphoglyc 99.9 7.4E-23 2.5E-27 172.9 9.2 128 11-139 173-311 (335)
24 1mx3_A CTBP1, C-terminal bindi 99.9 2.6E-22 8.8E-27 170.3 12.5 123 11-133 176-307 (347)
25 1wwk_A Phosphoglycerate dehydr 99.9 5.2E-23 1.8E-27 171.9 7.8 130 11-140 150-290 (307)
26 2cuk_A Glycerate dehydrogenase 99.9 4.3E-22 1.5E-26 166.6 11.7 119 11-133 152-275 (311)
27 1gdh_A D-glycerate dehydrogena 99.9 3.2E-22 1.1E-26 168.0 7.4 122 11-133 154-284 (320)
28 2ekl_A D-3-phosphoglycerate de 99.8 7.9E-22 2.7E-26 165.1 7.5 122 11-133 150-281 (313)
29 2o4c_A Erythronate-4-phosphate 99.8 9.9E-22 3.4E-26 168.4 7.2 120 11-133 124-252 (380)
30 3ba1_A HPPR, hydroxyphenylpyru 99.8 5E-21 1.7E-25 161.6 10.8 121 11-133 172-297 (333)
31 2w2k_A D-mandelate dehydrogena 99.8 9.7E-21 3.3E-25 160.6 10.4 122 11-133 171-302 (348)
32 2d0i_A Dehydrogenase; structur 99.8 1.3E-19 4.6E-24 152.7 8.0 121 11-133 154-282 (333)
33 2gcg_A Glyoxylate reductase/hy 99.8 2E-19 6.8E-24 151.4 7.9 123 11-133 163-293 (330)
34 2dbq_A Glyoxylate reductase; D 99.8 1.3E-19 4.4E-24 152.8 5.4 122 11-133 158-286 (334)
35 1ygy_A PGDH, D-3-phosphoglycer 99.8 1.1E-18 3.6E-23 155.3 9.3 122 11-133 150-278 (529)
36 3hg7_A D-isomer specific 2-hyd 99.7 8.1E-18 2.8E-22 141.5 6.3 121 58-178 136-278 (324)
37 3pp8_A Glyoxylate/hydroxypyruv 99.7 6.2E-18 2.1E-22 141.7 5.5 116 58-178 135-277 (315)
38 3kb6_A D-lactate dehydrogenase 99.7 2.3E-18 7.9E-23 145.3 1.1 115 58-178 137-293 (334)
39 3jtm_A Formate dehydrogenase, 99.7 1.6E-17 5.6E-22 141.0 3.0 115 58-178 160-304 (351)
40 3evt_A Phosphoglycerate dehydr 99.7 1.9E-17 6.4E-22 139.2 3.2 117 57-178 132-275 (324)
41 4g2n_A D-isomer specific 2-hyd 99.7 3.5E-17 1.2E-21 138.7 4.3 114 58-178 169-310 (345)
42 4hy3_A Phosphoglycerate oxidor 99.6 2.8E-16 9.5E-21 134.0 7.1 114 58-178 172-313 (365)
43 3gg9_A D-3-phosphoglycerate de 99.6 1.4E-16 4.9E-21 135.2 2.9 116 58-178 156-299 (352)
44 4e5n_A Thermostable phosphite 99.6 6.2E-16 2.1E-20 130.2 4.9 116 58-178 141-291 (330)
45 2j6i_A Formate dehydrogenase; 99.6 3.5E-16 1.2E-20 133.3 2.6 115 58-178 160-310 (364)
46 3k5p_A D-3-phosphoglycerate de 99.6 7.5E-16 2.6E-20 133.2 3.3 115 58-178 152-296 (416)
47 2yq5_A D-isomer specific 2-hyd 99.6 4E-16 1.4E-20 132.0 1.6 115 58-178 144-297 (343)
48 2pi1_A D-lactate dehydrogenase 99.6 2.3E-16 8E-21 133.1 -0.1 115 58-178 137-293 (334)
49 2nac_A NAD-dependent formate d 99.6 1.1E-15 3.9E-20 131.3 3.9 114 59-178 188-331 (393)
50 4dgs_A Dehydrogenase; structur 99.5 4.6E-16 1.6E-20 131.6 0.4 115 58-178 167-305 (340)
51 1sc6_A PGDH, D-3-phosphoglycer 99.5 2.4E-15 8.1E-20 129.8 2.1 116 57-178 140-285 (404)
52 1j4a_A D-LDH, D-lactate dehydr 99.5 3E-15 1E-19 126.1 1.2 115 58-178 142-296 (333)
53 1wwk_A Phosphoglycerate dehydr 99.5 8.2E-15 2.8E-19 122.2 3.7 115 58-178 138-280 (307)
54 3gvx_A Glycerate dehydrogenase 99.5 1.1E-14 3.9E-19 120.5 4.6 113 58-178 118-254 (290)
55 1qp8_A Formate dehydrogenase; 99.5 6.2E-15 2.1E-19 122.8 1.3 115 59-178 121-259 (303)
56 1xdw_A NAD+-dependent (R)-2-hy 99.5 5.1E-15 1.8E-19 124.6 0.6 114 59-178 143-296 (331)
57 3d64_A Adenosylhomocysteinase; 99.5 2.4E-15 8.1E-20 132.5 -2.5 114 11-133 285-409 (494)
58 1v8b_A Adenosylhomocysteinase; 99.4 6.1E-15 2.1E-19 129.5 -0.3 115 11-133 265-392 (479)
59 2cuk_A Glycerate dehydrogenase 99.4 3.2E-14 1.1E-18 118.8 4.0 114 59-178 141-276 (311)
60 1dxy_A D-2-hydroxyisocaproate 99.4 5E-15 1.7E-19 124.8 -1.4 115 58-178 141-294 (333)
61 2g76_A 3-PGDH, D-3-phosphoglyc 99.4 2.6E-14 8.9E-19 120.6 2.5 115 58-178 161-302 (335)
62 1mx3_A CTBP1, C-terminal bindi 99.4 2.2E-13 7.5E-18 115.4 6.3 114 59-178 165-308 (347)
63 1gdh_A D-glycerate dehydrogena 99.4 1.7E-13 5.7E-18 114.8 5.5 114 59-178 143-285 (320)
64 2ekl_A D-3-phosphoglycerate de 99.4 1.1E-13 3.8E-18 115.6 1.6 115 58-178 138-282 (313)
65 3ba1_A HPPR, hydroxyphenylpyru 99.3 5.2E-13 1.8E-17 112.5 3.7 114 58-178 160-298 (333)
66 3oet_A Erythronate-4-phosphate 99.3 1.6E-13 5.4E-18 117.5 -0.8 118 58-178 115-256 (381)
67 2gcg_A Glyoxylate reductase/hy 99.3 3.5E-12 1.2E-16 107.1 5.3 116 58-179 151-295 (330)
68 2w2k_A D-mandelate dehydrogena 99.2 3.8E-12 1.3E-16 107.7 3.5 115 58-179 159-304 (348)
69 2o4c_A Erythronate-4-phosphate 99.2 1.7E-12 5.7E-17 111.2 0.8 118 58-178 112-253 (380)
70 2d0i_A Dehydrogenase; structur 99.2 1.2E-11 4E-16 104.1 5.8 115 59-179 143-284 (333)
71 2dbq_A Glyoxylate reductase; D 99.2 9E-12 3.1E-16 104.8 4.1 113 59-178 147-287 (334)
72 1ygy_A PGDH, D-3-phosphoglycer 99.1 9.7E-11 3.3E-15 104.1 5.2 115 58-178 138-279 (529)
73 3n58_A Adenosylhomocysteinase; 98.7 3.8E-09 1.3E-13 91.9 2.2 84 11-98 255-347 (464)
74 3h9u_A Adenosylhomocysteinase; 98.6 1.5E-08 5E-13 88.0 3.8 85 11-99 219-312 (436)
75 1gtm_A Glutamate dehydrogenase 98.5 1.1E-09 3.9E-14 94.7 -5.6 110 11-133 220-338 (419)
76 3gvp_A Adenosylhomocysteinase 98.4 9.6E-08 3.3E-12 82.7 2.5 83 11-97 228-319 (435)
77 2rir_A Dipicolinate synthase, 98.4 2.2E-07 7.7E-12 76.4 4.1 75 11-90 165-250 (300)
78 3d4o_A Dipicolinate synthase s 98.3 3.1E-07 1.1E-11 75.4 4.3 75 11-90 163-248 (293)
79 3ce6_A Adenosylhomocysteinase; 98.3 7.8E-08 2.7E-12 84.8 0.3 113 11-131 282-407 (494)
80 1v8b_A Adenosylhomocysteinase; 98.1 1.2E-07 4E-12 83.3 -3.5 106 59-177 254-392 (479)
81 3d64_A Adenosylhomocysteinase; 98.0 7.4E-08 2.5E-12 84.9 -5.6 105 59-177 274-409 (494)
82 2vhw_A Alanine dehydrogenase; 98.0 1.8E-06 6.3E-11 73.4 1.9 98 11-131 176-294 (377)
83 1gtm_A Glutamate dehydrogenase 97.3 8.8E-06 3E-10 70.3 -3.2 116 43-178 197-339 (419)
84 1c1d_A L-phenylalanine dehydro 97.3 0.00014 4.8E-09 61.5 3.5 88 11-105 183-279 (355)
85 2eez_A Alanine dehydrogenase; 97.2 7.4E-05 2.5E-09 63.1 0.6 102 11-131 174-292 (369)
86 1x13_A NAD(P) transhydrogenase 97.1 0.00037 1.3E-08 59.7 4.3 50 43-93 248-301 (401)
87 4dio_A NAD(P) transhydrogenase 97.1 0.00043 1.5E-08 59.5 4.4 52 42-93 267-321 (405)
88 3l6d_A Putative oxidoreductase 97.0 8.8E-05 3E-09 60.9 -0.5 104 11-114 17-129 (306)
89 3qha_A Putative oxidoreductase 97.0 0.0006 2E-08 55.6 4.4 101 11-113 23-132 (296)
90 4dll_A 2-hydroxy-3-oxopropiona 97.0 0.00039 1.3E-08 57.4 3.3 103 11-113 39-151 (320)
91 3p2y_A Alanine dehydrogenase/p 96.9 0.00044 1.5E-08 59.0 2.9 81 11-92 192-310 (381)
92 3pdu_A 3-hydroxyisobutyrate de 96.7 0.00072 2.5E-08 54.6 3.0 103 11-113 9-122 (287)
93 4gbj_A 6-phosphogluconate dehy 96.5 0.0018 6.1E-08 53.1 4.1 104 11-114 13-125 (297)
94 1l7d_A Nicotinamide nucleotide 96.5 0.0036 1.2E-07 52.9 6.0 47 44-91 251-301 (384)
95 4e21_A 6-phosphogluconate dehy 96.5 0.0018 6.2E-08 54.6 3.8 102 11-114 30-143 (358)
96 2h78_A Hibadh, 3-hydroxyisobut 96.3 0.00067 2.3E-08 55.1 -0.0 97 11-107 11-118 (302)
97 3doj_A AT3G25530, dehydrogenas 96.1 0.0042 1.5E-07 50.8 3.9 102 11-112 29-141 (310)
98 3pef_A 6-phosphogluconate dehy 96.0 0.0046 1.6E-07 49.8 3.8 103 11-113 9-122 (287)
99 3g0o_A 3-hydroxyisobutyrate de 95.9 0.00045 1.5E-08 56.4 -2.8 103 11-113 15-129 (303)
100 3qsg_A NAD-binding phosphogluc 95.9 0.0025 8.6E-08 52.3 1.7 102 11-114 32-147 (312)
101 2zyd_A 6-phosphogluconate dehy 95.8 0.0034 1.2E-07 54.8 2.2 102 11-113 23-140 (480)
102 1vpd_A Tartronate semialdehyde 95.8 0.00084 2.9E-08 54.2 -1.7 96 11-106 13-119 (299)
103 1yb4_A Tartronic semialdehyde 95.8 0.0036 1.2E-07 50.3 2.0 94 11-105 11-115 (295)
104 3obb_A Probable 3-hydroxyisobu 95.5 0.007 2.4E-07 49.7 2.8 103 11-113 11-124 (300)
105 3cky_A 2-hydroxymethyl glutara 95.4 0.0023 7.9E-08 51.6 -0.5 95 11-105 12-117 (301)
106 2yjz_A Metalloreductase steap4 94.3 0.0029 9.9E-08 48.9 0.0 74 11-90 27-109 (201)
107 3ggo_A Prephenate dehydrogenas 95.2 0.014 4.8E-07 48.0 3.8 119 11-133 41-176 (314)
108 4gwg_A 6-phosphogluconate dehy 95.1 0.018 6.3E-07 50.4 4.5 103 11-114 12-131 (484)
109 4ezb_A Uncharacterized conserv 95.0 0.028 9.5E-07 46.2 5.2 89 22-114 49-149 (317)
110 2iz1_A 6-phosphogluconate dehy 94.8 0.0075 2.6E-07 52.4 1.2 102 11-113 13-130 (474)
111 1gpj_A Glutamyl-tRNA reductase 94.7 0.028 9.5E-07 47.8 4.5 90 11-132 175-283 (404)
112 3ond_A Adenosylhomocysteinase; 94.7 0.011 3.7E-07 51.9 1.9 83 11-97 273-364 (488)
113 2cvz_A Dehydrogenase, 3-hydrox 94.3 0.0067 2.3E-07 48.4 -0.4 92 11-105 9-109 (289)
114 2p4q_A 6-phosphogluconate dehy 94.2 0.012 4.3E-07 51.5 1.2 102 11-113 18-136 (497)
115 2gf2_A Hibadh, 3-hydroxyisobut 94.0 0.0085 2.9E-07 48.1 -0.2 92 11-102 8-110 (296)
116 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.8 0.016 5.6E-07 50.4 1.1 75 38-113 53-130 (478)
117 2pv7_A T-protein [includes: ch 93.6 0.012 4E-07 47.9 -0.2 56 42-99 57-112 (298)
118 2g5c_A Prephenate dehydrogenas 92.7 0.24 8.1E-06 39.3 6.4 79 23-103 28-113 (281)
119 2uyy_A N-PAC protein; long-cha 92.5 0.062 2.1E-06 43.5 2.7 97 11-107 38-145 (316)
120 2q3e_A UDP-glucose 6-dehydroge 92.3 0.15 5.1E-06 44.0 5.0 65 40-104 72-149 (467)
121 1np3_A Ketol-acid reductoisome 90.6 0.014 4.7E-07 48.5 -3.3 73 11-85 24-106 (338)
122 4e12_A Diketoreductase; oxidor 90.2 0.76 2.6E-05 36.7 6.8 72 39-113 74-145 (283)
123 1leh_A Leucine dehydrogenase; 89.7 0.14 5E-06 43.1 2.3 88 11-105 181-278 (364)
124 2pgd_A 6-phosphogluconate dehy 89.6 0.41 1.4E-05 41.5 5.1 102 11-113 10-128 (482)
125 3oj0_A Glutr, glutamyl-tRNA re 87.5 2.1 7.3E-05 30.1 7.0 85 11-101 29-132 (144)
126 4a7p_A UDP-glucose dehydrogena 86.7 1.7 6E-05 37.3 7.2 64 39-102 73-145 (446)
127 3b1f_A Putative prephenate deh 85.9 0.93 3.2E-05 35.9 4.8 90 11-102 14-117 (290)
128 2vhw_A Alanine dehydrogenase; 85.6 0.33 1.1E-05 40.7 2.0 102 60-176 166-295 (377)
129 1gpj_A Glutamyl-tRNA reductase 85.1 0.91 3.1E-05 38.3 4.5 97 60-176 165-283 (404)
130 2raf_A Putative dinucleotide-b 84.9 0.041 1.4E-06 42.3 -3.7 41 47-90 54-94 (209)
131 3ce6_A Adenosylhomocysteinase; 84.8 0.079 2.7E-06 46.5 -2.3 105 59-175 271-407 (494)
132 3ktd_A Prephenate dehydrogenas 84.7 0.028 9.6E-07 47.0 -5.0 118 11-133 16-150 (341)
133 1i36_A Conserved hypothetical 83.6 0.46 1.6E-05 37.2 1.9 58 42-103 48-105 (264)
134 2d5c_A AROE, shikimate 5-dehyd 83.5 3.2 0.00011 32.5 6.9 59 41-105 163-223 (263)
135 3c24_A Putative oxidoreductase 83.5 0.042 1.4E-06 44.1 -4.3 75 12-89 21-104 (286)
136 3d1l_A Putative NADP oxidoredu 82.3 0.11 3.7E-06 41.0 -2.3 79 11-91 18-107 (266)
137 2i99_A MU-crystallin homolog; 80.2 2.8 9.6E-05 33.9 5.5 72 11-88 143-228 (312)
138 2qrj_A Saccharopine dehydrogen 80.0 1.8 6.1E-05 36.8 4.4 62 18-86 235-300 (394)
139 1mv8_A GMD, GDP-mannose 6-dehy 76.3 5 0.00017 34.0 6.1 64 39-102 65-140 (436)
140 2vns_A Metalloreductase steap3 75.5 1.7 6E-05 33.0 2.8 44 43-90 76-119 (215)
141 2hk9_A Shikimate dehydrogenase 72.5 6.6 0.00023 31.0 5.7 64 21-87 152-222 (275)
142 4a5o_A Bifunctional protein fo 72.3 3.8 0.00013 33.3 4.1 39 42-87 196-234 (286)
143 3l07_A Bifunctional protein fo 71.8 4.3 0.00015 33.0 4.4 41 41-88 195-235 (285)
144 2f1k_A Prephenate dehydrogenas 71.7 1.6 5.3E-05 34.3 1.7 57 41-100 49-105 (279)
145 3ngx_A Bifunctional protein fo 71.7 3.7 0.00012 33.2 3.9 41 41-88 184-224 (276)
146 3p2o_A Bifunctional protein fo 71.6 4.1 0.00014 33.1 4.2 41 41-88 194-234 (285)
147 3gg2_A Sugar dehydrogenase, UD 71.2 11 0.00037 32.2 7.1 64 39-102 67-138 (450)
148 1pjc_A Protein (L-alanine dehy 70.2 6.2 0.00021 32.6 5.2 68 19-86 188-267 (361)
149 1b0a_A Protein (fold bifunctio 69.4 3.7 0.00013 33.4 3.5 41 41-88 193-233 (288)
150 1a4i_A Methylenetetrahydrofola 69.0 5.8 0.0002 32.4 4.6 43 41-90 199-241 (301)
151 2c2x_A Methylenetetrahydrofola 67.7 5.9 0.0002 32.1 4.3 41 42-89 195-235 (281)
152 3pid_A UDP-glucose 6-dehydroge 67.3 7.5 0.00026 33.3 5.2 66 39-105 98-172 (432)
153 3fr7_A Putative ketol-acid red 65.3 1.3 4.4E-05 39.1 -0.1 44 42-88 113-156 (525)
154 3ojo_A CAP5O; rossmann fold, c 64.9 8.4 0.00029 32.9 5.0 52 48-99 81-142 (431)
155 2ahr_A Putative pyrroline carb 64.5 6.8 0.00023 30.2 4.1 85 11-103 11-105 (259)
156 1x7d_A Ornithine cyclodeaminas 64.2 12 0.0004 31.0 5.6 73 11-87 137-227 (350)
157 1bg6_A N-(1-D-carboxylethyl)-L 63.1 9.9 0.00034 30.5 5.0 59 41-102 66-124 (359)
158 3fef_A Putative glucosidase LP 63.1 6.9 0.00024 33.7 4.1 66 23-88 35-148 (450)
159 3hdj_A Probable ornithine cycl 63.0 7.9 0.00027 31.5 4.3 70 11-87 129-214 (313)
160 4a26_A Putative C-1-tetrahydro 62.9 6.4 0.00022 32.2 3.7 38 43-87 201-240 (300)
161 1vl6_A Malate oxidoreductase; 62.8 15 0.00053 31.0 6.2 43 41-88 254-296 (388)
162 2dpo_A L-gulonate 3-dehydrogen 60.5 4.3 0.00015 33.1 2.3 71 39-113 76-147 (319)
163 2izz_A Pyrroline-5-carboxylate 59.7 15 0.00051 29.5 5.5 59 40-102 74-132 (322)
164 2duw_A Putative COA-binding pr 57.8 4.4 0.00015 29.1 1.7 77 23-106 42-119 (145)
165 3k96_A Glycerol-3-phosphate de 57.4 16 0.00053 30.2 5.3 63 40-104 89-155 (356)
166 1jay_A Coenzyme F420H2:NADP+ o 57.1 6.4 0.00022 29.2 2.6 70 41-117 55-136 (212)
167 2y0c_A BCEC, UDP-glucose dehyd 57.0 23 0.00078 30.4 6.4 62 40-101 74-143 (478)
168 2rcy_A Pyrroline carboxylate r 56.3 10 0.00034 29.1 3.7 74 23-103 33-106 (262)
169 4f2g_A Otcase 1, ornithine car 56.2 54 0.0018 26.7 8.2 74 20-93 177-274 (309)
170 1x0v_A GPD-C, GPDH-C, glycerol 54.2 14 0.00047 29.8 4.4 48 40-89 80-127 (354)
171 1yqg_A Pyrroline-5-carboxylate 54.1 0.65 2.2E-05 36.2 -3.6 84 11-103 8-103 (263)
172 4fgw_A Glycerol-3-phosphate de 54.0 11 0.00036 31.9 3.7 52 36-89 103-154 (391)
173 3dfu_A Uncharacterized protein 53.9 3.5 0.00012 32.3 0.7 62 11-86 14-75 (232)
174 3k6j_A Protein F01G10.3, confi 53.8 17 0.00057 31.4 5.0 70 40-114 121-191 (460)
175 3h9u_A Adenosylhomocysteinase; 52.9 6 0.00021 34.0 2.0 82 58-143 207-312 (436)
176 2o3j_A UDP-glucose 6-dehydroge 52.6 21 0.0007 30.7 5.4 63 40-102 76-151 (481)
177 1y81_A Conserved hypothetical 52.2 6 0.0002 28.1 1.6 76 23-106 43-118 (138)
178 3gt0_A Pyrroline-5-carboxylate 51.2 14 0.00049 28.3 3.8 76 23-102 31-111 (247)
179 1edz_A 5,10-methylenetetrahydr 50.6 9.8 0.00033 31.3 2.9 42 42-89 237-278 (320)
180 4b4u_A Bifunctional protein fo 50.4 17 0.00059 29.7 4.3 39 41-86 213-251 (303)
181 3n58_A Adenosylhomocysteinase; 49.2 2.4 8.2E-05 36.8 -1.1 50 58-107 243-307 (464)
182 3dtt_A NADP oxidoreductase; st 48.1 6.9 0.00024 30.2 1.5 45 39-86 79-124 (245)
183 2nu8_A Succinyl-COA ligase [AD 47.5 13 0.00046 29.6 3.2 91 11-106 16-117 (288)
184 2b0j_A 5,10-methenyltetrahydro 46.8 97 0.0033 25.5 8.1 63 41-105 132-195 (358)
185 2rir_A Dipicolinate synthase, 46.7 27 0.00093 27.6 5.0 63 41-108 51-123 (300)
186 1f0y_A HCDH, L-3-hydroxyacyl-C 45.5 14 0.00049 29.2 3.1 59 40-101 90-149 (302)
187 1dlj_A UDP-glucose dehydrogena 45.3 72 0.0025 26.4 7.6 62 41-103 64-134 (402)
188 2a9f_A Putative malic enzyme ( 43.2 19 0.00065 30.5 3.6 58 41-105 249-306 (398)
189 3ojo_A CAP5O; rossmann fold, c 42.9 35 0.0012 29.0 5.3 61 21-89 349-409 (431)
190 4dio_A NAD(P) transhydrogenase 42.7 43 0.0015 28.3 5.7 62 43-114 83-144 (405)
191 1omo_A Alanine dehydrogenase; 42.4 34 0.0012 27.6 5.0 39 41-86 179-217 (322)
192 3tri_A Pyrroline-5-carboxylate 42.1 47 0.0016 26.0 5.7 79 23-105 31-116 (280)
193 2p10_A MLL9387 protein; putati 41.2 40 0.0014 27.3 5.0 53 49-104 182-251 (286)
194 2ef0_A Ornithine carbamoyltran 39.0 1.3E+02 0.0046 24.1 8.0 75 20-94 177-272 (301)
195 2dc1_A L-aspartate dehydrogena 38.1 27 0.00092 26.5 3.5 86 11-105 8-103 (236)
196 3u62_A Shikimate dehydrogenase 36.6 97 0.0033 24.0 6.6 57 40-103 156-214 (253)
197 1js1_X Transcarbamylase; alpha 36.4 1.7E+02 0.006 23.8 8.5 65 20-85 195-274 (324)
198 1l7d_A Nicotinamide nucleotide 36.4 62 0.0021 26.6 5.7 65 41-111 58-123 (384)
199 1txg_A Glycerol-3-phosphate de 35.4 28 0.00095 27.5 3.3 57 43-102 64-124 (335)
200 3gd5_A Otcase, ornithine carba 34.8 1.7E+02 0.0059 23.8 8.0 56 39-94 214-284 (323)
201 1zej_A HBD-9, 3-hydroxyacyl-CO 34.1 4.4 0.00015 32.8 -1.7 97 11-114 20-132 (293)
202 1yj8_A Glycerol-3-phosphate de 33.9 17 0.00059 29.7 1.9 47 40-88 93-143 (375)
203 1pvv_A Otcase, ornithine carba 33.7 1.9E+02 0.0065 23.4 8.3 75 20-94 178-282 (315)
204 2i6u_A Otcase, ornithine carba 32.0 2E+02 0.0068 23.2 8.1 74 20-93 172-275 (307)
205 3u95_A Glycoside hydrolase, fa 30.7 62 0.0021 27.8 4.9 20 39-58 65-84 (477)
206 1z82_A Glycerol-3-phosphate de 30.6 4 0.00014 33.0 -2.6 42 40-88 71-113 (335)
207 1vkn_A N-acetyl-gamma-glutamyl 29.1 42 0.0014 27.8 3.4 38 43-87 71-108 (351)
208 4ep1_A Otcase, ornithine carba 27.0 2.4E+02 0.008 23.2 7.6 55 39-93 236-304 (340)
209 1pg5_A Aspartate carbamoyltran 26.7 1.7E+02 0.0059 23.4 6.7 66 21-86 176-260 (299)
210 3g79_A NDP-N-acetyl-D-galactos 26.5 94 0.0032 26.7 5.3 44 45-88 96-149 (478)
211 3grf_A Ornithine carbamoyltran 25.8 2.5E+02 0.0084 22.9 7.5 55 39-93 223-293 (328)
212 1wn4_A Vontr protein; helix, p 25.2 35 0.0012 17.5 1.4 19 134-152 9-27 (28)
213 1iuk_A Hypothetical protein TT 24.9 89 0.003 21.8 4.2 77 23-106 42-119 (140)
214 1ml4_A Aspartate transcarbamoy 24.9 1.9E+02 0.0063 23.4 6.5 67 20-86 180-268 (308)
215 1vlv_A Otcase, ornithine carba 24.8 2.8E+02 0.0096 22.5 7.7 75 20-94 191-296 (325)
216 3tpf_A Otcase, ornithine carba 24.2 2.8E+02 0.0096 22.3 7.9 56 39-94 203-273 (307)
217 2i76_A Hypothetical protein; N 23.7 26 0.0009 27.3 1.2 42 41-88 49-91 (276)
218 3pid_A UDP-glucose 6-dehydroge 23.5 48 0.0017 28.2 2.9 40 20-59 364-404 (432)
219 1obb_A Maltase, alpha-glucosid 22.9 71 0.0024 27.6 3.8 21 40-60 67-87 (480)
220 4ed9_A CAIB/BAIF family protei 22.8 81 0.0028 26.3 4.1 43 43-85 90-132 (385)
221 3mog_A Probable 3-hydroxybutyr 22.2 36 0.0012 29.3 1.8 71 41-117 76-148 (483)
222 1evy_A Glycerol-3-phosphate de 21.8 16 0.00055 29.6 -0.5 49 40-89 75-127 (366)
223 2dvm_A Malic enzyme, 439AA lon 21.7 1.5E+02 0.005 25.3 5.5 59 41-104 254-312 (439)
224 3abi_A Putative uncharacterize 20.5 54 0.0018 26.6 2.5 40 41-86 68-108 (365)
225 3i83_A 2-dehydropantoate 2-red 20.5 1.3E+02 0.0044 23.7 4.8 62 42-106 63-124 (320)
226 3g79_A NDP-N-acetyl-D-galactos 20.5 96 0.0033 26.7 4.2 72 20-96 385-458 (478)
227 2h1q_A Hypothetical protein; Z 20.4 90 0.0031 24.8 3.7 33 22-57 161-193 (270)
No 1
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.96 E-value=1.1e-30 Score=220.67 Aligned_cols=129 Identities=27% Similarity=0.312 Sum_probs=111.9
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc-cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEe
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS-KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILIN 84 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn 84 (180)
.|+||+. +.|||++++||+...... +....+.+|+|++++||||++|+|+|++|+||||++.|++||+|+++||
T Consensus 149 ~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN 228 (334)
T 3kb6_A 149 TGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLIN 228 (334)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEE
T ss_pred cchHHHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEe
Confidence 6888885 468999999997654322 2234678999999999999999999999999999999999999999999
Q ss_pred cCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCC---------------CCCCCCceeec----ccCHHH
Q psy5266 85 TSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADH---------------PLVQLDNCGNG----LLDQEA 139 (180)
Q Consensus 85 ~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~---------------~l~~~~Nv~~g----~~~~~a 139 (180)
++||++||+++|.++|++|+|.+|+||||++||++.++ +|+++|||+.| ..+.++
T Consensus 229 ~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia~~T~ea 302 (334)
T 3kb6_A 229 TARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKS 302 (334)
T ss_dssp CSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHH
T ss_pred cCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEECCchhhChHHH
Confidence 99999999999999999999999999999999975554 67889999996 445554
No 2
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.94 E-value=8e-27 Score=201.86 Aligned_cols=142 Identities=27% Similarity=0.292 Sum_probs=117.3
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. +.|||++.+||++............++++++++||+|++|+|++++|+++|+.+.|++||+|+++||+
T Consensus 164 lG~IG~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~ 243 (416)
T 3k5p_A 164 YGNIGSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINN 243 (416)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEEC
T ss_pred eCHHHHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEEC
Confidence 6778875 36899999999875433333456789999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCC----CCCCCCCceeec----ccCH-----------HHHHHHHHc
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPAD----HPLVQLDNCGNG----LLDQ-----------EALVEFLRD 146 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~----~~l~~~~Nv~~g----~~~~-----------~al~~~L~~ 146 (180)
+||+++|+++|.++|+++++.+++||||++||++.+ +||+++|||+.+ ..+. +.+.+++++
T Consensus 244 aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~ 323 (416)
T 3k5p_A 244 ARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDV 323 (416)
T ss_dssp SCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999998654 789999999996 3444 347778888
Q ss_pred cccccc
Q psy5266 147 KKIGGA 152 (180)
Q Consensus 147 g~l~ga 152 (180)
|...+.
T Consensus 324 g~~~~~ 329 (416)
T 3k5p_A 324 GSTVGA 329 (416)
T ss_dssp CCCTTB
T ss_pred CCCCce
Confidence 876544
No 3
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.94 E-value=7.4e-27 Score=196.58 Aligned_cols=123 Identities=34% Similarity=0.421 Sum_probs=111.3
Q ss_pred cCCcccc-----ceeeeEEEeccccccC--CccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTG--GSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. ..||+++.+||++... .........++++++++||+|++|+|++++|+++|+.+.|++||+|+++|
T Consensus 148 lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailI 227 (324)
T 3hg7_A 148 TGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILF 227 (324)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEE
T ss_pred ECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEE
Confidence 6888885 3678999999887643 22334567899999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
|++||+++|+++|.++|+++.+.+++||||++||++.++||+++|||++|
T Consensus 228 N~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilT 277 (324)
T 3hg7_A 228 NVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIIT 277 (324)
T ss_dssp ECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEEC
T ss_pred ECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEe
Confidence 99999999999999999999999999999999999999999999999996
No 4
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.94 E-value=5.2e-27 Score=196.86 Aligned_cols=123 Identities=21% Similarity=0.215 Sum_probs=109.4
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. +.||+++.+|+++..... .......+|++++++||+|++|+|++++|+++|+.+.+++||+|+++|
T Consensus 147 ~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailI 226 (315)
T 3pp8_A 147 AGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVL 226 (315)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEE
T ss_pred eCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEE
Confidence 6888885 357888888887655321 112234689999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
|++||+++|+++|.++|+++.+.+++||||++||++.++||+++|||++|
T Consensus 227 N~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilT 276 (315)
T 3pp8_A 227 NLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMT 276 (315)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEEC
T ss_pred ECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEEC
Confidence 99999999999999999999999999999999999999999999999996
No 5
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.93 E-value=2e-26 Score=193.96 Aligned_cols=123 Identities=31% Similarity=0.379 Sum_probs=111.3
Q ss_pred cCCcccc-----ceeeeEEEeccccccC--CccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTG--GSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. +.||+++.+|+++... .....+...+|++++++||+|++|+|++++|+++|+.+.+++||+|+++|
T Consensus 145 lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailI 224 (324)
T 3evt_A 145 TGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLI 224 (324)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEE
T ss_pred cCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEE
Confidence 6788875 3678899999877543 22334567899999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
|++||+++|+++|.++|+++.+.+++||||++||++.++||+++|||+++
T Consensus 225 N~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilT 274 (324)
T 3evt_A 225 NIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLIT 274 (324)
T ss_dssp ECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEEC
T ss_pred EcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEc
Confidence 99999999999999999999999999999999999999999999999996
No 6
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.93 E-value=2.8e-26 Score=194.57 Aligned_cols=122 Identities=23% Similarity=0.290 Sum_probs=109.0
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC--ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG--SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. +.||+++.+||++.... ..+.....++++++++||+|++|+|++++|+++|+.+.|++||+|+++|
T Consensus 181 lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailI 260 (345)
T 4g2n_A 181 MGRIGRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVI 260 (345)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEE
T ss_pred eChhHHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEE
Confidence 6888885 46889999998875321 1123334699999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
|++||+++|+++|.++|+++++.+++||||++|| +.++||+++|||+++
T Consensus 261 N~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilT 309 (345)
T 4g2n_A 261 NISRGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLT 309 (345)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEEC
T ss_pred ECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEc
Confidence 9999999999999999999999999999999999 889999999999996
No 7
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.93 E-value=5.3e-26 Score=193.23 Aligned_cols=123 Identities=22% Similarity=0.389 Sum_probs=109.8
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC--c--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG--S--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~--~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
.|+||+. +.||+++.+||++.... . .+.....++++++++||+|++|+|++++|+++|+.+.+++||+|++
T Consensus 172 ~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gai 251 (351)
T 3jtm_A 172 AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVL 251 (351)
T ss_dssp CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEE
T ss_pred eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCE
Confidence 6788885 46888999998765321 1 1233456999999999999999999999999999999999999999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||++||+++|+++|.++|+++.+.+++||||++||++.++||+++|||+++
T Consensus 252 lIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilT 303 (351)
T 3jtm_A 252 IVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMT 303 (351)
T ss_dssp EEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCC
T ss_pred EEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999997
No 8
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.93 E-value=2.8e-26 Score=194.41 Aligned_cols=129 Identities=29% Similarity=0.399 Sum_probs=112.7
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. +.||+++.+||++.....+....+.++++++++||+|++|+|++++|+++|+.+.|++||+|+++||+
T Consensus 156 lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 235 (343)
T 2yq5_A 156 VGHIGSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINC 235 (343)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEEC
T ss_pred cCHHHHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEEC
Confidence 6888885 46889999999887643333345669999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCC--CCCC-----------CCCCCCCceeec----ccCHHH
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEP--LPAD-----------HPLVQLDNCGNG----LLDQEA 139 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep--~~~~-----------~~l~~~~Nv~~g----~~~~~a 139 (180)
+||+++|+++|.++|+++.+.+++||||++|| ++.+ +||+++|||+++ ..+.++
T Consensus 236 aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea 306 (343)
T 2yq5_A 236 ARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETS 306 (343)
T ss_dssp SCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHH
T ss_pred CCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHH
Confidence 99999999999999999999999999999999 4444 379999999996 455544
No 9
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.93 E-value=8.8e-26 Score=192.70 Aligned_cols=122 Identities=28% Similarity=0.361 Sum_probs=105.7
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. ..||+++++||++..... +......+|++++++||+|++|+|++++|+++|+.+.|++||+|+++|
T Consensus 184 lG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailI 263 (365)
T 4hy3_A 184 FGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFI 263 (365)
T ss_dssp CSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEE
T ss_pred CCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEE
Confidence 6778875 468999999998753211 112346799999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
|++||+++|+++|.++|++++|. ++||||++||++.++||+++|||+++
T Consensus 264 N~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilT 312 (365)
T 4hy3_A 264 LLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRS 312 (365)
T ss_dssp ECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEEC
T ss_pred ECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEEC
Confidence 99999999999999999999998 99999999999899999999999996
No 10
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.93 E-value=1.2e-25 Score=194.20 Aligned_cols=142 Identities=27% Similarity=0.356 Sum_probs=113.2
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. +.|||++.+||+.............++++++++||+|++|+|++++|+++|+.+.|++||+|+++||+
T Consensus 153 lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~ 232 (404)
T 1sc6_A 153 YGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINA 232 (404)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEEC
T ss_pred ECHHHHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEEC
Confidence 6778874 36899999999876532222345569999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCC----CCCCCCCCceeec----ccCHH-----------HHHHHHHc
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPA----DHPLVQLDNCGNG----LLDQE-----------ALVEFLRD 146 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~----~~~l~~~~Nv~~g----~~~~~-----------al~~~L~~ 146 (180)
+||+++|+++|.++|+++.+.+++||||++||++. ++||+++|||+++ ..+.| .+.++++.
T Consensus 233 aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g 312 (404)
T 1sc6_A 233 SRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDN 312 (404)
T ss_dssp SCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999753 4799999999996 34443 46677777
Q ss_pred cccccc
Q psy5266 147 KKIGGA 152 (180)
Q Consensus 147 g~l~ga 152 (180)
|.+.+.
T Consensus 313 ~~~~~~ 318 (404)
T 1sc6_A 313 GSTLSA 318 (404)
T ss_dssp CCCTTB
T ss_pred CCCcce
Confidence 765433
No 11
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.92 E-value=1.2e-25 Score=191.17 Aligned_cols=123 Identities=26% Similarity=0.379 Sum_probs=109.5
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC---ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG---SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|+||+. +.||+++.+||++.... ..+.....++++++++||+|++|+|++++|+++|+.+.+++||+|+++
T Consensus 168 lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gail 247 (352)
T 3gg9_A 168 YGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALF 247 (352)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEE
T ss_pred ECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEE
Confidence 6778875 35788888888875321 122334459999999999999999999999999999999999999999
Q ss_pred EecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 83 INTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 83 vn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
||++||+++|+++|.++|+++.+.+++||||++||++.++||+++|||+++
T Consensus 248 IN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilT 298 (352)
T 3gg9_A 248 VNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICT 298 (352)
T ss_dssp EECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEEC
T ss_pred EECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEEC
Confidence 999999999999999999999999999999999999999999999999996
No 12
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.92 E-value=3.3e-26 Score=193.34 Aligned_cols=123 Identities=28% Similarity=0.313 Sum_probs=109.2
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc-cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEe
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS-KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILIN 84 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn 84 (180)
.|+||+. +.||+++++||++..... +......++++++++||+|++|+|++++|+++|+.+.+++||+|+++||
T Consensus 149 ~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN 228 (334)
T 2pi1_A 149 TGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLIN 228 (334)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEE
T ss_pred cCHHHHHHHHHHHHCcCEEEEECCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEE
Confidence 6888885 367889999988765321 2223566799999999999999999999999999999999999999999
Q ss_pred cCCCCccCHHHHHHHHhcCCcceEEeecCCCCCC---------------CCCCCCCCCCceeec
Q psy5266 85 TSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPL---------------PADHPLVQLDNCGNG 133 (180)
Q Consensus 85 ~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~---------------~~~~~l~~~~Nv~~g 133 (180)
++||+++|+++|.++|+++.+.+++||||++||+ +.++||+++|||+++
T Consensus 229 ~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilT 292 (334)
T 2pi1_A 229 TARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIIT 292 (334)
T ss_dssp CSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEEC
T ss_pred CCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEEC
Confidence 9999999999999999999999999999999997 467889999999996
No 13
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.91 E-value=5.8e-25 Score=186.13 Aligned_cols=121 Identities=23% Similarity=0.324 Sum_probs=84.1
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. ..||+++..||++.... .......+++|++++||+|++|+|++++|+++|+.+.+++||+++++||+
T Consensus 179 lG~IG~~vA~~l~~~G~~V~~~dr~~~~~-~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~ 257 (340)
T 4dgs_A 179 LGQIGRALASRAEAFGMSVRYWNRSTLSG-VDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNV 257 (340)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECSSCCTT-SCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCcccc-cCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEEC
Confidence 6778875 35788888998876542 23345679999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||+++|+++|.++|+++.+.+++||||++||++. +||+++|||+++
T Consensus 258 aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvilT 304 (340)
T 4dgs_A 258 ARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTVLM 304 (340)
T ss_dssp SCC--------------CCSSEEEESCCSSSSSCC-SHHHHSSSEEEC
T ss_pred CCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCEEEc
Confidence 99999999999999999999999999999999754 599999999996
No 14
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.91 E-value=3.4e-25 Score=186.89 Aligned_cols=123 Identities=25% Similarity=0.322 Sum_probs=109.7
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc---cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS---KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|+||+. +.||+++.+||++..... +......++++++++||+|++|+|++++|+++|+.+.+++||+|+++
T Consensus 153 ~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gail 232 (330)
T 4e5n_A 153 MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALL 232 (330)
T ss_dssp CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEE
T ss_pred eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEE
Confidence 7788875 468999999998763211 11134569999999999999999999999999999999999999999
Q ss_pred EecCCCCccCHHHHHHHHhcCCcceEEeecCCCC-------CCCCCCCCCCCCceeec
Q psy5266 83 INTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPE-------PLPADHPLVQLDNCGNG 133 (180)
Q Consensus 83 vn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~e-------p~~~~~~l~~~~Nv~~g 133 (180)
||++||+++|+++|.++|+++.+.+++||||++| |++.++||+++|||+++
T Consensus 233 IN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilT 290 (330)
T 4e5n_A 233 VNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFT 290 (330)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEEC
T ss_pred EECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEEC
Confidence 9999999999999999999999999999999999 98889999999999996
No 15
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.90 E-value=5.8e-24 Score=183.01 Aligned_cols=123 Identities=25% Similarity=0.357 Sum_probs=109.0
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
.|+||+. +.||+++.+||++..... .+.....++++++++||+|++|+|++++|+++|+.+.+++||+|++
T Consensus 199 lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gai 278 (393)
T 2nac_A 199 AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAY 278 (393)
T ss_dssp CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEE
T ss_pred ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCE
Confidence 7788885 367888888887753211 1223346899999999999999999999999999999999999999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||++||.++|+++|.++|+++.+.+++||||.+||++.++||++++|++++
T Consensus 279 lIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilT 330 (393)
T 2nac_A 279 IVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMT 330 (393)
T ss_dssp EEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCC
T ss_pred EEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEEC
Confidence 9999999999999999999999999999999999999889999999999996
No 16
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.90 E-value=6.2e-24 Score=181.31 Aligned_cols=123 Identities=27% Similarity=0.342 Sum_probs=108.6
Q ss_pred cCCcccc-----ceeeeE-EEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCc
Q psy5266 11 TGTPGQV-----HLIVCV-LIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTA 80 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~-~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~ 80 (180)
.|+||+. +.||++ +.+||++..... .+.....++++++++||+|++|+|++++|+++|+.+.+++||+|+
T Consensus 172 ~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga 251 (364)
T 2j6i_A 172 AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGA 251 (364)
T ss_dssp CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTE
T ss_pred cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCC
Confidence 7888885 367886 888886653211 122344689999999999999999999999999999999999999
Q ss_pred EEEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCC--C---ceeec
Q psy5266 81 ILINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQL--D---NCGNG 133 (180)
Q Consensus 81 ~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~--~---Nv~~g 133 (180)
++||++||+++|+++|.++|+++.+.+++||||++||++.++||+.+ | ||++|
T Consensus 252 ~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilT 309 (364)
T 2j6i_A 252 WLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMT 309 (364)
T ss_dssp EEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEEC
T ss_pred EEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEEC
Confidence 99999999999999999999999999999999999999999999999 9 99996
No 17
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.90 E-value=2.5e-24 Score=181.72 Aligned_cols=123 Identities=28% Similarity=0.359 Sum_probs=107.6
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. +.||+++.+||++.....+....+.++++++++||+|++|+|++++|+++|+.+.+++||+|+++||+
T Consensus 153 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~ 232 (333)
T 1dxy_A 153 TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINT 232 (333)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEEC
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEEC
Confidence 6888885 36899999999877643222234569999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCCC--C-------CC----CCCCCCCceeec
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPL--P-------AD----HPLVQLDNCGNG 133 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~--~-------~~----~~l~~~~Nv~~g 133 (180)
+||+++|+++|.++|+++.+.+++||||++||. + .. +||+++|||++|
T Consensus 233 srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~T 293 (333)
T 1dxy_A 233 ARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLS 293 (333)
T ss_dssp SCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEEC
T ss_pred CCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEEC
Confidence 999999999999999999999999999999983 1 12 479999999996
No 18
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.90 E-value=4.1e-24 Score=180.22 Aligned_cols=123 Identities=29% Similarity=0.364 Sum_probs=107.6
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. +.||+++.+||++.....+......++++++++||+|++|+|++++|+++|+.+.+++||+|+++||+
T Consensus 154 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~ 233 (331)
T 1xdw_A 154 LGRIGRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNC 233 (331)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEEC
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEEC
Confidence 6788875 35889999999877543222245669999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCCC--CCC-------C----CCCCC-Cceeec
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPL--PAD-------H----PLVQL-DNCGNG 133 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~--~~~-------~----~l~~~-~Nv~~g 133 (180)
+||+++|+++|.++|+++.+.+++||||++||. +.+ + ||+++ |||+++
T Consensus 234 srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilT 295 (331)
T 1xdw_A 234 ARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLIT 295 (331)
T ss_dssp SCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEEC
T ss_pred CCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEc
Confidence 999999999999999999999999999999994 332 3 69999 999996
No 19
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.90 E-value=1.3e-23 Score=174.33 Aligned_cols=119 Identities=18% Similarity=0.197 Sum_probs=106.7
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. ..||+++.+||++..... ......++++++++||+|++|+|++++|+++|+.+.+++||+|+++||+
T Consensus 130 lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ 208 (290)
T 3gvx_A 130 YGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNV 208 (290)
T ss_dssp CSHHHHHHHHHHHHHTCEEEEECSSCCCTT-CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEEC
T ss_pred cCchhHHHHHHHHhhCcEEEEEeccccccc-cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEe
Confidence 6778875 357888999988765322 2334569999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||.++|+++|.++|+++.+.++++|||+.||+ +||+++||++++
T Consensus 209 aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilT 253 (290)
T 3gvx_A 209 ARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILS 253 (290)
T ss_dssp SCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEEC
T ss_pred ehhcccCCcchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcC
Confidence 999999999999999999999999999999996 899999999997
No 20
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.89 E-value=6.7e-24 Score=179.08 Aligned_cols=123 Identities=24% Similarity=0.267 Sum_probs=105.9
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeecc-CHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEe
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLIL-VIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILIN 84 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn 84 (180)
.|+||+. +.||+++.+||++.....+...... ++++++++||+|++|+|++++|+++|+.+.+++||+|+++||
T Consensus 154 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn 233 (333)
T 1j4a_A 154 TGHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVN 233 (333)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEE
Confidence 7788875 3578899999887653211112334 899999999999999999999999999999999999999999
Q ss_pred cCCCCccCHHHHHHHHhcCCcceEEeecCCCCC--CCCCC-----------CCCCCCceeec
Q psy5266 85 TSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEP--LPADH-----------PLVQLDNCGNG 133 (180)
Q Consensus 85 ~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep--~~~~~-----------~l~~~~Nv~~g 133 (180)
++||+++|+++|.++|+++.+.+|+||||++|| ++.++ +|+++|||+++
T Consensus 234 ~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilT 295 (333)
T 1j4a_A 234 VSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVT 295 (333)
T ss_dssp CSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEEC
T ss_pred CCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEEC
Confidence 999999999999999999999999999999999 44443 59999999996
No 21
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.89 E-value=2.8e-23 Score=173.26 Aligned_cols=121 Identities=16% Similarity=0.187 Sum_probs=109.2
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. +.||+++.+|+++... .+.....++++++++||+|++|+|++++|+++|+.+.+++||+|+++||+
T Consensus 132 ~G~IG~~~A~~l~~~G~~V~~~dr~~~~--~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~ 209 (303)
T 1qp8_A 132 LGEIGTRVGKILAALGAQVRGFSRTPKE--GPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNV 209 (303)
T ss_dssp CSTHHHHHHHHHHHTTCEEEEECSSCCC--SSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEEC
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCccc--cCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEEC
Confidence 7888885 3578889999877651 13345678999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecC-CCCCCCCCCCCCCCCceeec
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVM-IPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~-~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||.++|+++|.++|+++.+.++++||| ++||++.+++|++++|++++
T Consensus 210 srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nvilt 258 (303)
T 1qp8_A 210 GRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVAT 258 (303)
T ss_dssp SCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEEC
T ss_pred CCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEEC
Confidence 9999999999999999999999999999 88998888999999999996
No 22
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.88 E-value=2.4e-23 Score=178.29 Aligned_cols=120 Identities=23% Similarity=0.185 Sum_probs=103.6
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCC----CcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKD----TEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~----T~glIg~~~i~~mk~g~~ 81 (180)
.|+||+. +.||+++.+||+...... ....+.++++++++||+|++|+|++++ |+++|+.+.|++||+|++
T Consensus 127 lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gai 205 (381)
T 3oet_A 127 VGNVGSRLQTRLEALGIRTLLCDPPRAARG-DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAI 205 (381)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECHHHHHTT-CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEE
T ss_pred ECHHHHHHHHHHHHCCCEEEEECCChHHhc-cCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcE
Confidence 6888885 367888888887654221 234678999999999999999999999 999999999999999999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||++||+++|+++|.++|+++++.+++||||++||++ +++|+.++ ++.+
T Consensus 206 lIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~-~~~L~~~~-~i~T 255 (381)
T 3oet_A 206 LINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDL-NVALLEAV-DIGT 255 (381)
T ss_dssp EEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHHHS-SEEC
T ss_pred EEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCC-cchhhhCC-EEEC
Confidence 99999999999999999999999999999999999975 45677664 5554
No 23
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.88 E-value=7.4e-23 Score=172.92 Aligned_cols=128 Identities=28% Similarity=0.355 Sum_probs=110.2
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. +.||+++.+||++..... +.-....++++++++||+|++|+|++++|+++|+.+.+++||+|+++|
T Consensus 173 lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailI 252 (335)
T 2g76_A 173 LGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVV 252 (335)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEE
T ss_pred ECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEE
Confidence 7888875 357899999998754310 001234689999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec----ccCHHH
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG----LLDQEA 139 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g----~~~~~a 139 (180)
|++||.++|+++|.++|+++.+.+++||||+.|| +.+++|++++|++++ ..+.++
T Consensus 253 N~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP-~~~~~L~~~~nvilTPH~~~~t~e~ 311 (335)
T 2g76_A 253 NCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCPHLGASTKEA 311 (335)
T ss_dssp ECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-CSCCHHHHSTTEEECSSCTTCBHHH
T ss_pred ECCCccccCHHHHHHHHHhCCccEEEEeecCCCC-CCCchHHhCCCEEECCcCCCCCHHH
Confidence 9999999999999999999999999999999999 678999999999996 445544
No 24
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.88 E-value=2.6e-22 Score=170.32 Aligned_cols=123 Identities=29% Similarity=0.445 Sum_probs=107.9
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCcc---ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSK---QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|+||+. +.||+++.+||++...... +.....++++++++||+|++|+|++++|+++|+.+.+++||+|+++
T Consensus 176 ~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gail 255 (347)
T 1mx3_A 176 LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFL 255 (347)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEE
T ss_pred ECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEE
Confidence 6778875 3578899999877543211 1233458999999999999999999999999999999999999999
Q ss_pred EecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCC-CCCCCCCCCceeec
Q psy5266 83 INTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLP-ADHPLVQLDNCGNG 133 (180)
Q Consensus 83 vn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~-~~~~l~~~~Nv~~g 133 (180)
||++||.++|+++|.++|+++.+.++++||++.||++ .+++|+.++|++.+
T Consensus 256 IN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~t 307 (347)
T 1mx3_A 256 VNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICT 307 (347)
T ss_dssp EECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEEC
T ss_pred EECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEE
Confidence 9999999999999999999999999999999999976 46899999999996
No 25
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.88 E-value=5.2e-23 Score=171.86 Aligned_cols=130 Identities=36% Similarity=0.458 Sum_probs=112.2
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. +.||+++.+||++..... +.-....++++++++||+|++|+|++++|+++|+.+.+++||+|+++|
T Consensus 150 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~li 229 (307)
T 1wwk_A 150 FGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILI 229 (307)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEE
Confidence 6778875 357889999998765310 001234589999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec----ccCHHHH
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG----LLDQEAL 140 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g----~~~~~al 140 (180)
|++||.++|+++|.++|+++.+.++++|||+.||++.+++|++++|++++ ..+.++.
T Consensus 230 n~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~ 290 (307)
T 1wwk_A 230 NTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQ 290 (307)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHH
T ss_pred ECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHH
Confidence 99999999999999999999999999999999998889999999999996 4555553
No 26
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.87 E-value=4.3e-22 Score=166.64 Aligned_cols=119 Identities=38% Similarity=0.497 Sum_probs=107.7
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. +.||+++.+|+++..... ....++++++++||+|++|+|++++|.++|+.+.+++||+|+++||+
T Consensus 152 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~ 228 (311)
T 2cuk_A 152 MGRIGQAVAKRALAFGMRVVYHARTPKPLP---YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNT 228 (311)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCSSS---SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEEC
T ss_pred ECHHHHHHHHHHHHCCCEEEEECCCCcccc---cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEEC
Confidence 6777875 357888888888765432 34678999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||.++|+++|.++|+ +.+.++++|||+.||++.+++|++++|++++
T Consensus 229 srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nvilt 275 (311)
T 2cuk_A 229 ARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVIT 275 (311)
T ss_dssp SCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEEC
T ss_pred CCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEEC
Confidence 9999999999999999 9999999999999999889999999999996
No 27
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.86 E-value=3.2e-22 Score=167.97 Aligned_cols=122 Identities=22% Similarity=0.261 Sum_probs=107.1
Q ss_pred cCCcccc-----ceeeeEEEeccc-cccCCc---cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHV-DLTGGS---KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
.|+||+. +.||+++.+||+ +..... .+.....++++++++||+|++|+|++++|+++|+.+.+++||+|++
T Consensus 154 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gai 233 (320)
T 1gdh_A 154 FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAI 233 (320)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcE
Confidence 6778875 357889999998 654310 1222334899999999999999999999999999999999999999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||++||.++|+++|.++|+++.+.++++||++.|| +.+++|++++|++++
T Consensus 234 lIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nvilt 284 (320)
T 1gdh_A 234 VVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLF 284 (320)
T ss_dssp EEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEEC
T ss_pred EEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEEC
Confidence 999999999999999999999999999999999999 889999999999996
No 28
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.85 E-value=7.9e-22 Score=165.11 Aligned_cols=122 Identities=23% Similarity=0.311 Sum_probs=106.6
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. +.+|+++.+||++..... +.-....++++++++||+|++|+|++++|.++|+.+.+++||+|+++|
T Consensus 150 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lI 229 (313)
T 2ekl_A 150 FGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIV 229 (313)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEE
T ss_pred eCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEE
Confidence 6888885 357889999988765310 001223589999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCC---CCCCCCceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADH---PLVQLDNCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~---~l~~~~Nv~~g 133 (180)
|++||.++|+++|.++|+++.+.+++|||++.||++ ++ +|++++|++++
T Consensus 230 n~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nvilt 281 (313)
T 2ekl_A 230 NTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVT 281 (313)
T ss_dssp ESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEEC
T ss_pred ECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEEC
Confidence 999999999999999999999999999999999976 66 99999999996
No 29
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.85 E-value=9.9e-22 Score=168.42 Aligned_cols=120 Identities=23% Similarity=0.271 Sum_probs=103.3
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCC----CcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKD----TEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~----T~glIg~~~i~~mk~g~~ 81 (180)
.|+||+. +.||+++.+||+.......+ ....++++++++||+|++|+|++++ |+++|+.+.+++||+|++
T Consensus 124 lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~g-~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gai 202 (380)
T 2o4c_A 124 AGQVGGRLVEVLRGLGWKVLVCDPPRQAREPD-GEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTW 202 (380)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECHHHHHHSTT-SCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCChhhhccC-cccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcE
Confidence 6888885 35788888888765422111 2467999999999999999999999 999999999999999999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||++||+++|+++|.++|+++.+.+++||||++||. .+++++. +|++.+
T Consensus 203 lIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~-~~~~l~~-~nvi~T 252 (380)
T 2o4c_A 203 LVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQ-ADPELAA-RCLIAT 252 (380)
T ss_dssp EEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTS-CCHHHHT-TCSEEC
T ss_pred EEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCC-Cchhhcc-CCEEEc
Confidence 9999999999999999999999999999999999995 4566776 488886
No 30
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.84 E-value=5e-21 Score=161.61 Aligned_cols=121 Identities=28% Similarity=0.427 Sum_probs=106.7
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
.|+||+. ..+|+++..||++.... .+.....++++++++||+|++|+|++++|+++|+.+.+++||+++++||+
T Consensus 172 ~G~iG~~vA~~l~~~G~~V~~~dr~~~~~-~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~ 250 (333)
T 3ba1_A 172 LGRIGLAVAERAEAFDCPISYFSRSKKPN-TNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINI 250 (333)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECSSCCTT-CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCchhc-cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEEC
Confidence 6777774 24678888888776532 23345678999999999999999999999999999999999999999999
Q ss_pred CCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 86 SRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 86 ~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
+||.++|+++|.++|+++.+.++++|||+.||.+. ++|+.++||+++
T Consensus 251 srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nvilt 297 (333)
T 3ba1_A 251 GRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLL 297 (333)
T ss_dssp SCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEEC
T ss_pred CCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEEC
Confidence 99999999999999999999999999999999755 999999999986
No 31
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.83 E-value=9.7e-21 Score=160.59 Aligned_cols=122 Identities=27% Similarity=0.351 Sum_probs=105.8
Q ss_pred cCCcccc-----c-eeeeEEEeccccccCCc--c--ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCc
Q psy5266 11 TGTPGQV-----H-LIVCVLIRYHVDLTGGS--K--QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTA 80 (180)
Q Consensus 11 ~G~iG~~-----~-~~~~~~~~~~~~~~~~~--~--~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~ 80 (180)
.|+||+. + .+|+++..||++..... . +.....++++++++||+|++|+|++++|.++|+.+.+++||+++
T Consensus 171 ~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~ga 250 (348)
T 2w2k_A 171 LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGS 250 (348)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTE
T ss_pred ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCC
Confidence 6777774 4 57888989988764211 1 22233489999999999999999999999999999999999999
Q ss_pred EEEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 81 ILINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 81 ~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
++||++||.++++++|.++|+++.+.++++|||..|| ..+.+|+.++|++++
T Consensus 251 ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nvilt 302 (348)
T 2w2k_A 251 RIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLT 302 (348)
T ss_dssp EEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEEC
T ss_pred EEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEc
Confidence 9999999999999999999999999999999999999 667889999999986
No 32
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.79 E-value=1.3e-19 Score=152.74 Aligned_cols=121 Identities=23% Similarity=0.337 Sum_probs=105.1
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc-cc-eeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS-KQ-VYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. +.+|+++..||++..... .. .....++++++++||+|++|+|++++|.++|+.+.++.||++ ++|
T Consensus 154 ~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ili 232 (333)
T 2d0i_A 154 MGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLV 232 (333)
T ss_dssp CSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEE
Confidence 6677774 357888999988765310 00 123458999999999999999999999999999999999999 999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCC-ceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLD-NCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~-Nv~~g 133 (180)
|++||.++|+++|.++|+++.+.++++|||..||.+ +++|+.++ |++++
T Consensus 233 n~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nvilt 282 (333)
T 2d0i_A 233 NIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLT 282 (333)
T ss_dssp ECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEEC
T ss_pred ECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEc
Confidence 999999999999999999999999999999999977 89999999 99986
No 33
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.78 E-value=2e-19 Score=151.37 Aligned_cols=123 Identities=39% Similarity=0.540 Sum_probs=105.9
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc--cc-eeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS--KQ-VYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|+||+. ..+|+++..||++..... .. .....++++++++||+|++|+|++++|.++|+.+.++.||+++++
T Consensus 163 ~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gail 242 (330)
T 2gcg_A 163 LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVF 242 (330)
T ss_dssp CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEE
Confidence 5677774 246788888887653211 11 122348999999999999999999999999999999999999999
Q ss_pred EecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 83 INTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 83 vn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
||++||.++++++|.++|+++.+.++++||+.+||++.+++|++++|++.+
T Consensus 243 In~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~t 293 (330)
T 2gcg_A 243 INISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVIL 293 (330)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEEC
T ss_pred EECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEEC
Confidence 999999999999999999999999999999999999889999999999985
No 34
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.77 E-value=1.3e-19 Score=152.82 Aligned_cols=122 Identities=34% Similarity=0.435 Sum_probs=105.9
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|+||+. ..+|+++..||++..... +.-....++++++++||+|++|+|++++|.++|+.+.+..||+++++|
T Consensus 158 ~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailI 237 (334)
T 2dbq_A 158 LGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILI 237 (334)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEE
T ss_pred cCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEE
Confidence 6777774 246888999988765310 001234689999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
|++||.++++++|.++|+++.+.++++|||..|| +.+++|+.++|++++
T Consensus 238 n~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~t 286 (334)
T 2dbq_A 238 NIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLT 286 (334)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEEC
T ss_pred ECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEEC
Confidence 9999999999999999999999999999999999 788999999999985
No 35
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.76 E-value=1.1e-18 Score=155.33 Aligned_cols=122 Identities=30% Similarity=0.467 Sum_probs=105.4
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC-ccc-eeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG-SKQ-VYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
+|+||+. ..+|+++.+||++.... ... -....++++++++||+|++|+|++++|.++|+.+.+.+||+|++++
T Consensus 150 ~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ili 229 (529)
T 1ygy_A 150 LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIV 229 (529)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEE
T ss_pred eCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEE
Confidence 6778875 24678888998865320 000 1233489999999999999999999999999999999999999999
Q ss_pred ecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceeec
Q psy5266 84 NTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGNG 133 (180)
Q Consensus 84 n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~g 133 (180)
|++||.++++++|.++|+++.+.++++||+..||. .+++|++++|++.+
T Consensus 230 n~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilT 278 (529)
T 1ygy_A 230 NAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVT 278 (529)
T ss_dssp ECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEEC
T ss_pred ECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEc
Confidence 99999999999999999999999999999999994 68999999999986
No 36
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.71 E-value=8.1e-18 Score=141.46 Aligned_cols=121 Identities=26% Similarity=0.298 Sum_probs=93.4
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC--------ccCHHHHHHHHhcCCcceEEeecCCCCCCCCC-C
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG--------LLDQEALVEFLRDKKIGGAGLDVMIPEPLPAD-H 122 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~--------~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~-~ 122 (180)
..+.++|.|+||.+.+++ ++. |..++...|.. .....++.++++++|++...++.+..+....+ .
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~ 215 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTAS 215 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTT
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHH
Confidence 457799999999999986 555 77777666542 12345799999999996665555433221111 1
Q ss_pred CCCCCC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 123 PLVQLD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
.+-.++ |+.|| ++++++|.++|++|+|+||++|||++||+|+++|||++|||++|+
T Consensus 216 ~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTP 278 (324)
T 3hg7_A 216 RFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITP 278 (324)
T ss_dssp TTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECC
T ss_pred HHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeC
Confidence 222232 88887 999999999999999999999999999999999999999999997
No 37
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.71 E-value=6.2e-18 Score=141.67 Aligned_cols=116 Identities=22% Similarity=0.283 Sum_probs=92.4
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC--------ccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG--------LLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHP 123 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~--------~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~ 123 (180)
..+.++|.|+||.+.+++ ++. |..++...|.. .....++.++++++|++...++.+ +.+..
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt-----~~t~~ 209 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNT-----AQTVG 209 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCC-----GGGTT
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCc-----hhhhh
Confidence 457789999999999986 565 77776665532 122478999999999954444433 33455
Q ss_pred CCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 124 LVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 124 l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
+++ ++ |++|| +++++||+++|++|+++||++|||++||+|+++|||++|||++|+
T Consensus 210 li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTP 277 (315)
T 3pp8_A 210 IINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTP 277 (315)
T ss_dssp CBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECS
T ss_pred hccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECC
Confidence 553 22 88887 999999999999999999999999999999999999999999997
No 38
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.69 E-value=2.3e-18 Score=145.33 Aligned_cols=115 Identities=22% Similarity=0.257 Sum_probs=94.0
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc-------cCHHHHHHHHhcCCcceEEeecCCCCCC-CCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL-------LDQEALVEFLRDKKIGGAGLDVMIPEPL-PADHP 123 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~-------vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~~ 123 (180)
..+.++|.|+||.+.+++ ++. |+.++...|..- +...++.++|+++|+ |+.+.|+ ++++.
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDi------vslh~Plt~~T~~ 210 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDV------ISLHVPYTKETHH 210 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSE------EEECCCCCTTTTT
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCE------EEEcCCCChhhcc
Confidence 346788999999999996 666 777777665421 112358899999999 6666666 66788
Q ss_pred CCCCC------------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCC---------------CcccCCcEE
Q psy5266 124 LVQLD------------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADH---------------PLVQLDNCE 175 (180)
Q Consensus 124 l~~~~------------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~---------------pl~~~~nv~ 175 (180)
|++.+ |++|| +++++||+++|++|+|+||++|||++||+|.++ |||++|||+
T Consensus 211 li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvi 290 (334)
T 3kb6_A 211 MINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVI 290 (334)
T ss_dssp CBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEE
T ss_pred CcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEE
Confidence 88743 99998 999999999999999999999999999998777 688899999
Q ss_pred EcC
Q psy5266 176 IRG 178 (180)
Q Consensus 176 it~ 178 (180)
+|+
T Consensus 291 lTP 293 (334)
T 3kb6_A 291 ITP 293 (334)
T ss_dssp ECC
T ss_pred ECC
Confidence 997
No 39
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.66 E-value=1.6e-17 Score=140.97 Aligned_cols=115 Identities=26% Similarity=0.409 Sum_probs=94.3
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc----------CHHHHHHHHhcCCcceEEeecCCCCCC-CC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL----------DQEALVEFLRDKKIGGAGLDVMIPEPL-PA 120 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v----------d~~al~~~L~~~~i~~~~lDv~~~ep~-~~ 120 (180)
..+.++|.|+||.+.+++ ++. |+.++...|...- ..+++.++++++|+ |+.+.|+ +.
T Consensus 160 ~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDv------V~l~~Plt~~ 233 (351)
T 3jtm_A 160 YDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDV------IVINMPLTEK 233 (351)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSE------EEECSCCCTT
T ss_pred ccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCE------EEECCCCCHH
Confidence 357899999999999986 666 8888777765311 11368899999999 5556665 45
Q ss_pred CCCCCCCC------------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 121 DHPLVQLD------------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 121 ~~~l~~~~------------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
+..+++.. |++|| +++++||.++|++|+|+||++|||++||+|+++|||++|||++|+
T Consensus 234 t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTP 304 (351)
T 3jtm_A 234 TRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTP 304 (351)
T ss_dssp TTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCC
T ss_pred HHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECC
Confidence 66676522 88887 999999999999999999999999999999999999999999997
No 40
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.66 E-value=1.9e-17 Score=139.23 Aligned_cols=117 Identities=30% Similarity=0.404 Sum_probs=92.5
Q ss_pred ccCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC--------ccCHHHHHHHHhcCCcceEEeecCCCCCCCCCC
Q psy5266 57 TCALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG--------LLDQEALVEFLRDKKIGGAGLDVMIPEPLPADH 122 (180)
Q Consensus 57 h~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~--------~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~ 122 (180)
...+.++|.|+||.+.+++ ++. |..++...|.. .+...++.++++++|++...++.+ +.+.
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt-----~~t~ 206 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLT-----PTTH 206 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCC-----GGGT
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCc-----hHHH
Confidence 3457899999999999986 555 77777665532 122357889999999955444443 3345
Q ss_pred CCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 123 PLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
.+++ ++ |+.|| .+++++|.++|++|+++||++|||++||+|+++|||++|||++|+
T Consensus 207 ~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTP 275 (324)
T 3evt_A 207 HLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITP 275 (324)
T ss_dssp TCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECC
T ss_pred HhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcC
Confidence 5554 22 88887 999999999999999999999999999999999999999999997
No 41
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.66 E-value=3.5e-17 Score=138.67 Aligned_cols=114 Identities=27% Similarity=0.360 Sum_probs=92.4
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc-------C-HHHHHHHHhcCCcceEEeecCCCCCC-CCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL-------D-QEALVEFLRDKKIGGAGLDVMIPEPL-PADH 122 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v-------d-~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~ 122 (180)
..+.++|.|+||.+.+++ ++. |+.++...|...- . .+++.++++++|+ |+.+.|+ +.+.
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDv------V~l~~Plt~~T~ 242 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDI------FLIAAPGRPELK 242 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSE------EEECSCCCGGGT
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCE------EEEecCCCHHHH
Confidence 457789999999999986 666 8888877765311 1 1368899999999 5555554 3455
Q ss_pred CCCCC------C------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 123 PLVQL------D------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~~------~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
.+++. + |+.|| +++++||+++|++|+|+||++|||++|| |.++|||++|||++|+
T Consensus 243 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilTP 310 (345)
T 4g2n_A 243 GFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLTP 310 (345)
T ss_dssp TCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECC
T ss_pred HHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEcC
Confidence 66642 2 88887 9999999999999999999999999999 8999999999999997
No 42
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.63 E-value=2.8e-16 Score=134.01 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=89.9
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc--------cCHHHHHHHHhcCCcceEEeecCCCCCC-CCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL--------LDQEALVEFLRDKKIGGAGLDVMIPEPL-PADH 122 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~--------vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~ 122 (180)
..+.++|.|+||.+.+++ ++. |+.++...|..- +...++.++++++|++ +.+.|+ +.+.
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV------~l~~Plt~~T~ 245 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFI------FVVAAVTSENK 245 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEE------EECSCSSCC--
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEE------EEcCcCCHHHH
Confidence 346789999999999986 777 888887776521 1122588999999994 445554 3455
Q ss_pred CCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 123 PLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
.+++ ++ |++|| +++++||.++|++|+|+ |++|||++||+|+++|||++|||++|+
T Consensus 246 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTP 313 (365)
T 4hy3_A 246 RFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSA 313 (365)
T ss_dssp -CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECC
T ss_pred hhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECC
Confidence 5554 22 88887 99999999999999998 899999999999999999999999997
No 43
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.61 E-value=1.4e-16 Score=135.20 Aligned_cols=116 Identities=17% Similarity=0.288 Sum_probs=91.4
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc--------c-CHHHHHHHHhcCCcceEEeecCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL--------L-DQEALVEFLRDKKIGGAGLDVMIPEPLPADH 122 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~--------v-d~~al~~~L~~~~i~~~~lDv~~~ep~~~~~ 122 (180)
..+.++|.|+||.+.+++ ++. |..++...|..- + ..+++.++++++|++...++.+ +.+.
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt-----~~t~ 230 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLN-----DETR 230 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCS-----TTTT
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCc-----HHHH
Confidence 456789999999999986 555 888877766421 1 1126888999999955444443 3344
Q ss_pred CCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 123 PLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
.+++ ++ |+.|| ++++++|.++|++|+|+||++|||++||+|+++|||++|||++|+
T Consensus 231 ~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTP 299 (352)
T 3gg9_A 231 SIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTP 299 (352)
T ss_dssp TCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECC
T ss_pred HhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECC
Confidence 4543 22 88887 999999999999999999999999999999999999999999997
No 44
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.59 E-value=6.2e-16 Score=130.25 Aligned_cols=116 Identities=24% Similarity=0.276 Sum_probs=92.5
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc---------cCHHHHHHHHhcCCcceEEeecCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL---------LDQEALVEFLRDKKIGGAGLDVMIPEPLPADH 122 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~---------vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~ 122 (180)
..+.++|.|+||.+.+++ ++. |+.++...|... +...++.++++++|++..+++.+ +.+.
T Consensus 141 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t-----~~t~ 215 (330)
T 4e5n_A 141 TGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLN-----ADTL 215 (330)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCS-----TTTT
T ss_pred CccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCC-----HHHH
Confidence 357789999999999986 777 888887777541 11124888999999954444443 3445
Q ss_pred CCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCC-------CCCCCCCcccCCcEEEcC
Q psy5266 123 PLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPE-------PMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~E-------plp~~~pl~~~~nv~it~ 178 (180)
.+++ ++ |+.|| +++++++.++|++|+|+||++|||++| |+|.++|||++|||++|+
T Consensus 216 ~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTP 291 (330)
T 4e5n_A 216 HLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTP 291 (330)
T ss_dssp TCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECS
T ss_pred HHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECC
Confidence 5554 22 88887 999999999999999999999999999 999999999999999997
No 45
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.58 E-value=3.5e-16 Score=133.34 Aligned_cols=115 Identities=23% Similarity=0.386 Sum_probs=89.7
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcE-EEecCCCCc----------cCHHHHHHHHhcCCcceEEeecCCCCCC-C
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAI-LINTSRGGL----------LDQEALVEFLRDKKIGGAGLDVMIPEPL-P 119 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~-lvn~~Rg~~----------vd~~al~~~L~~~~i~~~~lDv~~~ep~-~ 119 (180)
..+.++|.|+||.+.+++ ++. |+. ++...|... ....++.++++++|++ +.+.|+ +
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV------~l~~P~t~ 233 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIV------TVNAPLHA 233 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEE------EECCCCST
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEE------EECCCCCh
Confidence 357899999999999986 665 774 665555421 1113588899999994 445554 2
Q ss_pred CCCCCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccC--C---cEEEcC
Q psy5266 120 ADHPLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQL--D---NCEIRG 178 (180)
Q Consensus 120 ~~~~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~--~---nv~it~ 178 (180)
.+..+++ ++ |+.|| ++++++|.++|++|+|+||+||||++||+|+++|||++ | ||++|+
T Consensus 234 ~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTP 310 (364)
T 2j6i_A 234 GTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTP 310 (364)
T ss_dssp TTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECC
T ss_pred HHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECC
Confidence 3445543 22 77787 89999999999999999999999999999999999999 9 999997
No 46
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.56 E-value=7.5e-16 Score=133.23 Aligned_cols=115 Identities=22% Similarity=0.320 Sum_probs=89.8
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC------ccCHHHHHHHHhcCCcceEEeecCCCCCC-CCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG------LLDQEALVEFLRDKKIGGAGLDVMIPEPL-PADHPL 124 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~------~vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~~l 124 (180)
..+.++|.|+||.+.+++ ++. |..++...|.. .....++.++++++|+ |+.+.|+ +.+..+
T Consensus 152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDv------V~lhvPlt~~T~~l 225 (416)
T 3k5p_A 152 REVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDV------VSLHVPSSKSTSKL 225 (416)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSE------EEECCCC-----CC
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCE------EEEeCCCCHHHhhh
Confidence 457789999999999986 555 77777665532 1223468999999999 5556665 445666
Q ss_pred CCC------C------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCC----CCcccCCcEEEcC
Q psy5266 125 VQL------D------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPAD----HPLVQLDNCEIRG 178 (180)
Q Consensus 125 ~~~------~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~----~pl~~~~nv~it~ 178 (180)
++. + |+.|| +++++|+.++|++|+++||++|||+.||++++ +|||++|||++|+
T Consensus 226 i~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTP 296 (416)
T 3k5p_A 226 ITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTP 296 (416)
T ss_dssp BCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECC
T ss_pred cCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECC
Confidence 652 2 88887 99999999999999999999999999998876 7999999999997
No 47
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.56 E-value=4e-16 Score=132.03 Aligned_cols=115 Identities=28% Similarity=0.424 Sum_probs=90.3
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC------ccCHHHHHHHHhcCCcceEEeecCCCCCC-CCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG------LLDQEALVEFLRDKKIGGAGLDVMIPEPL-PADHPL 124 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~------~vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~~l 124 (180)
..+.++|.|+||.+.+++ ++. |+.++...|.. .+...++.++++++|+ |+.+.|+ +.+..+
T Consensus 144 ~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDv------V~l~~Plt~~t~~l 217 (343)
T 2yq5_A 144 NEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADI------VSLHTPLFPSTENM 217 (343)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSE------EEECCCCCTTTTTC
T ss_pred cccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCE------EEEcCCCCHHHHHH
Confidence 346789999999999986 565 78777766642 1222368899999999 4445554 445666
Q ss_pred CCC------C------ceeec-ccCHHHHHHHHHccccccccccCCCCCC--CCCC-----------CCcccCCcEEEcC
Q psy5266 125 VQL------D------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEP--MPAD-----------HPLVQLDNCEIRG 178 (180)
Q Consensus 125 ~~~------~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Ep--lp~~-----------~pl~~~~nv~it~ 178 (180)
++. + |+.|| +++++||.++|++|+++||++|||++|| +|.+ +|||++|||++|+
T Consensus 218 i~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTP 297 (343)
T 2yq5_A 218 IGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITP 297 (343)
T ss_dssp BCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECS
T ss_pred hhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECC
Confidence 652 2 88887 9999999999999999999999999999 5665 4899999999997
No 48
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.56 E-value=2.3e-16 Score=133.05 Aligned_cols=115 Identities=22% Similarity=0.252 Sum_probs=91.5
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc-------cCHHHHHHHHhcCCcceEEeecCCCCCC-CCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL-------LDQEALVEFLRDKKIGGAGLDVMIPEPL-PADHP 123 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~-------vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~~ 123 (180)
..+.++|.|+||.+.+++ ++. |..++...|..- +...++.++++++|+ |+.+.|+ +.+..
T Consensus 137 ~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~g~~~~~l~ell~~aDv------V~l~~P~t~~t~~ 210 (334)
T 2pi1_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDV------ISLHVPYTKETHH 210 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSE------EEECCCCCTTTTT
T ss_pred eeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhHhcCceecCHHHHHhhCCE------EEEeCCCChHHHH
Confidence 457789999999999986 565 777777666421 111238889999999 5555554 45566
Q ss_pred CCCCC------------ceeec-ccCHHHHHHHHHccccccccccCCCCCCC---------------CCCCCcccCCcEE
Q psy5266 124 LVQLD------------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPM---------------PADHPLVQLDNCE 175 (180)
Q Consensus 124 l~~~~------------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Epl---------------p~~~pl~~~~nv~ 175 (180)
+++.. |+.|| ++++++|.++|++|+++||++|||++||+ |+++|||++|||+
T Consensus 211 li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvi 290 (334)
T 2pi1_A 211 MINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVI 290 (334)
T ss_dssp CBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEE
T ss_pred hhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEE
Confidence 66522 88887 99999999999999999999999999998 6799999999999
Q ss_pred EcC
Q psy5266 176 IRG 178 (180)
Q Consensus 176 it~ 178 (180)
+|+
T Consensus 291 lTP 293 (334)
T 2pi1_A 291 ITP 293 (334)
T ss_dssp ECC
T ss_pred ECC
Confidence 997
No 49
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.56 E-value=1.1e-15 Score=131.34 Aligned_cols=114 Identities=23% Similarity=0.363 Sum_probs=90.1
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc----------CHHHHHHHHhcCCcceEEeecCCCCCC-CCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL----------DQEALVEFLRDKKIGGAGLDVMIPEPL-PAD 121 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v----------d~~al~~~L~~~~i~~~~lDv~~~ep~-~~~ 121 (180)
.+.++|.|+||.+.+++ ++. |+.++...|...- ...++.++++++|+ |+.+.|+ +.+
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDv------V~l~~Plt~~t 261 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDV------VTLNCPLHPET 261 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSE------EEECSCCCTTT
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCE------EEEecCCchHH
Confidence 57789999999999986 666 7777766654210 01257889999999 4445554 344
Q ss_pred CCCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 122 HPLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 122 ~~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
..+++ ++ |+.|| +++++++.++|++|+|+||++|||++||+|.++|||++|||++|+
T Consensus 262 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTP 331 (393)
T 2nac_A 262 EHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTP 331 (393)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCC
T ss_pred HHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECC
Confidence 55553 22 77777 899999999999999999999999999999999999999999997
No 50
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.55 E-value=4.6e-16 Score=131.57 Aligned_cols=115 Identities=23% Similarity=0.345 Sum_probs=72.0
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc-----cCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL-----LDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQ 126 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~-----vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~ 126 (180)
..+.++|.|+||.+.+++ ++. |..++...|..- ....++.++++++|++..+++.. +.+..+++
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t-----~~t~~li~ 241 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAAS-----AATQNIVD 241 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC---------------C
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCC-----HHHHHHhh
Confidence 457789999999999986 555 777776655421 11346889999999954444333 34455553
Q ss_pred ------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 127 ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 127 ------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
++ |+.|| +++++++.++|++|+|+||++|||++||+|+ +|||++|||++|+
T Consensus 242 ~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvilTP 305 (340)
T 4dgs_A 242 ASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTVLMP 305 (340)
T ss_dssp HHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCC-SHHHHSSSEEECS
T ss_pred HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCEEEcC
Confidence 11 88887 9999999999999999999999999999876 6999999999997
No 51
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.51 E-value=2.4e-15 Score=129.82 Aligned_cols=116 Identities=21% Similarity=0.330 Sum_probs=84.3
Q ss_pred ccCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC------ccCHHHHHHHHhcCCcceEEeecCCCCCC-CCCCC
Q psy5266 57 TCALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG------LLDQEALVEFLRDKKIGGAGLDVMIPEPL-PADHP 123 (180)
Q Consensus 57 h~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~------~vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~~ 123 (180)
...+.++|.|+||.+.+++ ++. |..++...|.. +....++.++++++|+ |+.+.|+ +.+..
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDv------V~l~~P~t~~t~~ 213 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDV------VSLHVPENPSTKN 213 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSE------EEECCCSSTTTTT
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCE------EEEccCCChHHHH
Confidence 3467899999999999986 554 77776655521 1112368899999999 5666665 45666
Q ss_pred CCCC------C------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCC----CCCcccCCcEEEcC
Q psy5266 124 LVQL------D------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPA----DHPLVQLDNCEIRG 178 (180)
Q Consensus 124 l~~~------~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~----~~pl~~~~nv~it~ 178 (180)
+++. + |+.|| +++++++.++|++|+++||++|||+.||++. ++|||++|||++|+
T Consensus 214 li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTP 285 (404)
T 1sc6_A 214 MMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTP 285 (404)
T ss_dssp CBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEEC
T ss_pred HhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECC
Confidence 7652 1 78887 9999999999999999999999999999875 57999999999997
No 52
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.50 E-value=3e-15 Score=126.14 Aligned_cols=115 Identities=20% Similarity=0.228 Sum_probs=86.7
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc------cCHH-HHHHHHhcCCcceEEeecCCCCCC-CCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL------LDQE-ALVEFLRDKKIGGAGLDVMIPEPL-PADHP 123 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~------vd~~-al~~~L~~~~i~~~~lDv~~~ep~-~~~~~ 123 (180)
..+.++|.|+||.+.+++ ++. |+.++...|..- +... ++.++++++|++.. +.|. +.+..
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l------~~p~~~~t~~ 215 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISL------HVPDVPANVH 215 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEE------CSCCCGGGTT
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEE------cCCCcHHHHH
Confidence 356788999999999987 454 777766655421 1111 57888999999544 4454 23445
Q ss_pred CCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCC--CCCCC-----------CcccCCcEEEc
Q psy5266 124 LVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEP--MPADH-----------PLVQLDNCEIR 177 (180)
Q Consensus 124 l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Ep--lp~~~-----------pl~~~~nv~it 177 (180)
+++ ++ |+.|| ++++++|.++|++|+|+||++|||++|| +|+++ |||++|||++|
T Consensus 216 li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilT 295 (333)
T 1j4a_A 216 MINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVT 295 (333)
T ss_dssp CBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEEC
T ss_pred HHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEEC
Confidence 553 11 77777 8999999999999999999999999999 56654 69999999999
Q ss_pred C
Q psy5266 178 G 178 (180)
Q Consensus 178 ~ 178 (180)
+
T Consensus 296 P 296 (333)
T 1j4a_A 296 P 296 (333)
T ss_dssp S
T ss_pred C
Confidence 7
No 53
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.49 E-value=8.2e-15 Score=122.17 Aligned_cols=115 Identities=29% Similarity=0.419 Sum_probs=89.7
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc--------cCHHHHHHHHhcCCcceEEeecCCCCCC-CCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL--------LDQEALVEFLRDKKIGGAGLDVMIPEPL-PADH 122 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~--------vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~ 122 (180)
..+.++|.|+||.+.+++ ++. |..++...|..- +...++.++++++|++. .+.|. +.+.
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~------l~~p~~~~t~ 211 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVT------IHVPLVESTY 211 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEE------ECCCCSTTTT
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEE------EecCCChHHh
Confidence 457789999999999996 554 777776665431 11124778899999944 44454 3345
Q ss_pred CCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 123 PLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
.+++ ++ |+.+| +++++++.++|++|+++||++||+++||+|+++|||++|||++|+
T Consensus 212 ~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltP 280 (307)
T 1wwk_A 212 HLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTP 280 (307)
T ss_dssp TCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECS
T ss_pred hhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECC
Confidence 5554 11 77777 899999999999999999999999999999999999999999997
No 54
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.49 E-value=1.1e-14 Score=120.53 Aligned_cols=113 Identities=15% Similarity=0.157 Sum_probs=88.4
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc----c-CHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL----L-DQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQ 126 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~----v-d~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~ 126 (180)
..+.++|.|+||.+.+++ ++. |..++...|..- + ..+++.++++++|++...++.+ +.+..+++
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t-----~~t~~li~ 192 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLT-----DKTRGMVN 192 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCC-----TTTTTCBS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeecc-----ccchhhhh
Confidence 357789999999999986 666 777777666431 1 1237889999999955444443 33444543
Q ss_pred ------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 127 ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 127 ------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
++ |+.|| +++++++.++|++|++++|++|||++||+ +|||++|||++|+
T Consensus 193 ~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTP 254 (290)
T 3gvx_A 193 SRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSP 254 (290)
T ss_dssp HHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECC
T ss_pred HHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCc
Confidence 22 88887 99999999999999999999999999997 9999999999997
No 55
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.47 E-value=6.2e-15 Score=122.77 Aligned_cols=115 Identities=18% Similarity=0.219 Sum_probs=89.6
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC----ccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCC--
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG----LLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQ-- 126 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~----~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~-- 126 (180)
.+.++|.|+||.+.+++ ++. |..++...|.. .....++.++++++|++..+++.. +.+..+++
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~~-----~~t~~~i~~~ 195 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLN-----KHTRGLVKYQ 195 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCS-----TTTTTCBCHH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcCc-----hHHHHHhCHH
Confidence 57789999999999986 554 77776666532 222346788999999955444443 23445554
Q ss_pred ----CC------ceeec-ccCHHHHHHHHHccccccccccCC-CCCCCCCCCCcccCCcEEEcC
Q psy5266 127 ----LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVM-IPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 127 ----~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~-~~Eplp~~~pl~~~~nv~it~ 178 (180)
++ |+.|| +++++++.++|++|+++||++||| ++||+|+++|||++|||++|+
T Consensus 196 ~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltP 259 (303)
T 1qp8_A 196 HLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATP 259 (303)
T ss_dssp HHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECC
T ss_pred HHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECC
Confidence 22 77777 899999999999999999999999 889999999999999999997
No 56
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.47 E-value=5.1e-15 Score=124.58 Aligned_cols=114 Identities=28% Similarity=0.399 Sum_probs=86.4
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC------ccCHHHHHHHHhcCCcceEEeecCCCCCC-CCCCCCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG------LLDQEALVEFLRDKKIGGAGLDVMIPEPL-PADHPLV 125 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~------~vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~~l~ 125 (180)
.+.++|.|+||.+.+++ ++. |+.++...|.. .+...++.++++++|+ |+.+.|+ +.+..++
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDv------V~~~~p~t~~t~~li 216 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDI------ITIHAPYIKENGAVV 216 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSE------EEECCCCCTTTCCSB
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCE------EEEecCCchHHHHHh
Confidence 46788999999999987 454 77666555432 1222368889999999 4445554 3455555
Q ss_pred C------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCC--CCC-------C----CcccC-CcEEEcC
Q psy5266 126 Q------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPM--PAD-------H----PLVQL-DNCEIRG 178 (180)
Q Consensus 126 ~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Epl--p~~-------~----pl~~~-~nv~it~ 178 (180)
+ ++ |+.|| ++++++|.++|++|+|+||++|||++||+ |++ + |||++ |||++|+
T Consensus 217 ~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTP 296 (331)
T 1xdw_A 217 TRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITP 296 (331)
T ss_dssp CHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECC
T ss_pred CHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcC
Confidence 4 22 77787 99999999999999999999999999994 333 3 79999 9999997
No 57
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.45 E-value=2.4e-15 Score=132.54 Aligned_cols=114 Identities=14% Similarity=0.160 Sum_probs=94.0
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc---cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS---KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|+||+. +.||+++..||++..... .......++++++++||+|++|+ .|.++|+.+.+++||+|+++
T Consensus 285 ~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~MK~gAil 360 (494)
T 3d64_A 285 YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVINHDHMKAMRHNAIV 360 (494)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSBCHHHHHHCCTTEEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----CcccccCHHHHhhCCCCcEE
Confidence 6778875 468899999998875321 11235679999999999999997 79999999999999999999
Q ss_pred EecCCCCc-cCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCC--Cceeec
Q psy5266 83 INTSRGGL-LDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQL--DNCGNG 133 (180)
Q Consensus 83 vn~~Rg~~-vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~--~Nv~~g 133 (180)
||++||.+ ||+++| ++|++++|. .++| .+|++.+++++.+ +|++.+
T Consensus 361 INvgrg~veID~~aL-~AL~~g~I~-~~~D---v~plp~~~pL~~l~~~nvv~t 409 (494)
T 3d64_A 361 CNIGHFDSEIDVAST-RQYQWENIK-PQVD---HIIFPDGKRVILLAEGRLVNL 409 (494)
T ss_dssp EECSSSSCSBCCGGG-TTSEEEEEE-TTEE---EEECTTSCEEEEEGGGSBHHH
T ss_pred EEcCCCcchhchHHH-HhhhcCccc-eeEE---EEECCCCCchhhcCCCCEEEE
Confidence 99999999 699999 899999986 4444 4576778899888 998874
No 58
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.45 E-value=6.1e-15 Score=129.49 Aligned_cols=115 Identities=14% Similarity=0.157 Sum_probs=96.3
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC---ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG---SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|+||+. +.||+++..||++.... ....+...++++++++||+|++|. .|.++|+.+.+++||+|+++
T Consensus 265 ~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~MK~gail 340 (479)
T 1v8b_A 265 YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVIKLEHLLKMKNNAVV 340 (479)
T ss_dssp CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSBCHHHHTTCCTTCEE
T ss_pred eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----ChhhhcCHHHHhhcCCCcEE
Confidence 6777875 46789999999887531 112235679999999999999994 89999999999999999999
Q ss_pred EecCCCCc-cCHHHHHH--HHhcCCcceEEeecCCCCCCCCCCCCCCC--Cceeec
Q psy5266 83 INTSRGGL-LDQEALVE--FLRDKKIGGAGLDVMIPEPLPADHPLVQL--DNCGNG 133 (180)
Q Consensus 83 vn~~Rg~~-vd~~al~~--~L~~~~i~~~~lDv~~~ep~~~~~~l~~~--~Nv~~g 133 (180)
+|++|+.+ ||+++|.+ +|+++.|. +++|++ |++.+++++.+ +|++.+
T Consensus 341 iNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nvv~t 392 (479)
T 1v8b_A 341 GNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPNGNKIIVLARGRLLNL 392 (479)
T ss_dssp EECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH
T ss_pred EEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCCCCeeeEecCCCEEEE
Confidence 99999999 99999999 99999997 889998 34457888887 898774
No 59
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.45 E-value=3.2e-14 Score=118.82 Aligned_cols=114 Identities=33% Similarity=0.461 Sum_probs=88.1
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc---cCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCC---
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL---LDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQ--- 126 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~---vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~--- 126 (180)
.+.++|.|+||.+.+++ ++. |..++...|..- +...++.++++++|++..+++.. +.+..+++
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~l~ell~~aDvV~l~~p~~-----~~t~~li~~~~ 215 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLPYPFLSLEELLKEADVVSLHTPLT-----PETHRLLNRER 215 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSSSCBCCHHHHHHHCSEEEECCCCC-----TTTTTCBCHHH
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccccccCCHHHHHhhCCEEEEeCCCC-----hHHHhhcCHHH
Confidence 56788999999999987 454 766666655421 33446888999999955444433 23344443
Q ss_pred ---CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 127 ---LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 127 ---~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
++ |+.+| +++++++.++|+ |+++|+++|||++||++.++|||++|||++|+
T Consensus 216 l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltP 276 (311)
T 2cuk_A 216 LFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITP 276 (311)
T ss_dssp HTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECC
T ss_pred HhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECC
Confidence 22 77776 899999999999 99999999999999999999999999999997
No 60
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.44 E-value=5e-15 Score=124.79 Aligned_cols=115 Identities=18% Similarity=0.274 Sum_probs=86.7
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC------ccCHHHHHHHHhcCCcceEEeecCCCCCC-CCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG------LLDQEALVEFLRDKKIGGAGLDVMIPEPL-PADHPL 124 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~------~vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~~l 124 (180)
..+.++|.|+||.+.+++ ++. |+.++...|.. .+...++.++++++|+ |+.+.|+ +.+..+
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDv------V~~~~P~~~~t~~l 214 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDV------IDLHVPGIEQNTHI 214 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSE------EEECCCCCGGGTTS
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCE------EEEcCCCchhHHHH
Confidence 457789999999999987 554 77776555432 1122368889999999 4445554 234555
Q ss_pred CC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCC--CCC-----------CCcccCCcEEEcC
Q psy5266 125 VQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPM--PAD-----------HPLVQLDNCEIRG 178 (180)
Q Consensus 125 ~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Epl--p~~-----------~pl~~~~nv~it~ 178 (180)
++ ++ |+.|| ++++++|.++|++|+|+||++|||++||+ |++ +|||++|||++|+
T Consensus 215 i~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TP 294 (333)
T 1dxy_A 215 INEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSP 294 (333)
T ss_dssp BCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECS
T ss_pred hCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECC
Confidence 54 22 77787 99999999999999999999999999983 221 5899999999997
No 61
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.43 E-value=2.6e-14 Score=120.57 Aligned_cols=115 Identities=25% Similarity=0.308 Sum_probs=88.6
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc--------CHHHHHHHHhcCCcceEEeecCCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL--------DQEALVEFLRDKKIGGAGLDVMIPEPLPADHP 123 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v--------d~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~ 123 (180)
..+.++|.|+||.+.+++ ++. |..++...|..-- ...++.++++++|++..+++.. +.+..
T Consensus 161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t-----~~t~~ 235 (335)
T 2g76_A 161 TELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLL-----PSTTG 235 (335)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCC-----TTTTT
T ss_pred cCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCC-----HHHHH
Confidence 457789999999999986 565 8777766664211 1125778999999954444443 23444
Q ss_pred CCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 124 LVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 124 l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
+++ ++ |+.|| +++++++.++|++|+++||++|||+.|| ++++|||++|||++|+
T Consensus 236 li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP-~~~~~L~~~~nvilTP 302 (335)
T 2g76_A 236 LLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCP 302 (335)
T ss_dssp SBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-CSCCHHHHSTTEEECS
T ss_pred hhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCC-CCCchHHhCCCEEECC
Confidence 553 22 77777 8999999999999999999999999999 6779999999999997
No 62
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.40 E-value=2.2e-13 Score=115.38 Aligned_cols=114 Identities=25% Similarity=0.327 Sum_probs=88.2
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCc--cC-------HHHHHHHHhcCCcceEEeecCCCCCC-CCCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGL--LD-------QEALVEFLRDKKIGGAGLDVMIPEPL-PADH 122 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~--vd-------~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~ 122 (180)
.+.++|.|+||.+.+++ ++. |..++...|..- .. ..++.++++++|+ |+.+.|+ +.+.
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDv------V~l~~P~t~~t~ 238 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDC------VTLHCGLNEHNH 238 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSE------EEECCCCCTTCT
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCE------EEEcCCCCHHHH
Confidence 57789999999999987 555 777776655321 00 1257889999999 5555554 3345
Q ss_pred CCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCC-CCCCcccCCcEEEcC
Q psy5266 123 PLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMP-ADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp-~~~pl~~~~nv~it~ 178 (180)
.+++ ++ |+.|| +++++++.++|++|+++||++||++.||++ .++|||.+|||++|+
T Consensus 239 ~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tP 308 (347)
T 1mx3_A 239 HLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTP 308 (347)
T ss_dssp TSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECS
T ss_pred HHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEc
Confidence 5553 22 77777 899999999999999999999999999987 479999999999997
No 63
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.40 E-value=1.7e-13 Score=114.84 Aligned_cols=114 Identities=19% Similarity=0.204 Sum_probs=87.4
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCC-CCcc--------C-HHHHHHHHhcCCcceEEeecCCCCCCCCCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSR-GGLL--------D-QEALVEFLRDKKIGGAGLDVMIPEPLPADH 122 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~R-g~~v--------d-~~al~~~L~~~~i~~~~lDv~~~ep~~~~~ 122 (180)
.+.++|.|+||.+.+++ ++. |..++...| ..-- . .+++.++++++|++..+++.. +.+.
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~-----~~t~ 217 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPST-----PETR 217 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCC-----TTTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCc-----hHHH
Confidence 56789999999999987 555 777776666 3210 0 115778899999955544443 2234
Q ss_pred CCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 123 PLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 123 ~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
.+++ ++ |+.+| +++++++.++|++|+++||++||++.|| +.++|||++|||++|+
T Consensus 218 ~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nviltP 285 (320)
T 1gdh_A 218 YFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFP 285 (320)
T ss_dssp TCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECS
T ss_pred hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEECC
Confidence 4442 21 77776 8999999999999999999999999999 8899999999999997
No 64
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.36 E-value=1.1e-13 Score=115.59 Aligned_cols=115 Identities=15% Similarity=0.268 Sum_probs=87.2
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc--------CHHHHHHHHhcCCcceEEeecCCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL--------DQEALVEFLRDKKIGGAGLDVMIPEPLPADHP 123 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v--------d~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~ 123 (180)
..+.++|.|+||.+.+++ ++. |..++...|..-- ...++.++++++|++..+++.. +.+..
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~-----~~t~~ 212 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVS-----KDAKP 212 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCC-----TTSCC
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCC-----hHHHH
Confidence 457789999999999987 554 7777766654311 0125778899999954444433 23444
Q ss_pred CCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCC---CcccCCcEEEcC
Q psy5266 124 LVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADH---PLVQLDNCEIRG 178 (180)
Q Consensus 124 l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~---pl~~~~nv~it~ 178 (180)
+++ ++ |+.+| +++++++.++|++|+++||++||+++||++ ++ |||++|||++|+
T Consensus 213 li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nviltP 282 (313)
T 2ekl_A 213 IIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVTT 282 (313)
T ss_dssp SBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEECC
T ss_pred hhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEECC
Confidence 553 11 77776 899999999999999999999999999988 56 999999999997
No 65
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.32 E-value=5.2e-13 Score=112.52 Aligned_cols=114 Identities=26% Similarity=0.414 Sum_probs=86.4
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC-----ccCHHHHHHHHhcCCcceEEeecCCCCCC-CCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG-----LLDQEALVEFLRDKKIGGAGLDVMIPEPL-PADHPLV 125 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~-----~vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~~~l~ 125 (180)
..+.++|.|+||.+.+++ ++. |..++...|.. .....++.++++++|+ |+.+.|. +.+..++
T Consensus 160 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDv------Vil~vP~~~~t~~li 233 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDI------LVVACPLTPETTHII 233 (333)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSE------EEECSCCCGGGTTCB
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCE------EEEecCCChHHHHHh
Confidence 457789999999999986 444 65555444432 1112357889999999 4555554 2345555
Q ss_pred CC-------C-----ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 126 QL-------D-----NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 126 ~~-------~-----Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
+. + |+.+| .++++++.++|++|+++++++|||.+||++. +|||++|||++|+
T Consensus 234 ~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nviltP 298 (333)
T 3ba1_A 234 NREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLLP 298 (333)
T ss_dssp CHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEECS
T ss_pred hHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEECC
Confidence 31 1 77777 8999999999999999999999999999876 9999999999997
No 66
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.30 E-value=1.6e-13 Score=117.49 Aligned_cols=118 Identities=17% Similarity=0.091 Sum_probs=87.7
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCC-----CccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRG-----GLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQ 126 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg-----~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~ 126 (180)
..+.++|.|+||.+.+++ ++. |..++...|. ......++.++++++|++...++.+...+ ..+..+++
T Consensus 115 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~-~~T~~li~ 193 (381)
T 3oet_A 115 FSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGP-YKTLHLAD 193 (381)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSST-TCCTTSBC
T ss_pred CccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCcccc-ccchhhcC
Confidence 356688999999999986 555 7777766542 12233468899999999555554443211 11555665
Q ss_pred CC------------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 127 LD------------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 127 ~~------------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
.. |+.|| +++++||.++|++|+++||++|||++||+|. +|||.++ +++|+
T Consensus 194 ~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~-~~L~~~~-~i~TP 256 (381)
T 3oet_A 194 ETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLN-VALLEAV-DIGTS 256 (381)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCC-HHHHHHS-SEECS
T ss_pred HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCc-chhhhCC-EEECC
Confidence 22 88887 9999999999999999999999999999764 6799885 88887
No 67
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.26 E-value=3.5e-12 Score=107.11 Aligned_cols=116 Identities=30% Similarity=0.471 Sum_probs=85.5
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC--c-------cCHHHHHHHHhcCCcceEEeecCCCCCC-CCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG--L-------LDQEALVEFLRDKKIGGAGLDVMIPEPL-PAD 121 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~--~-------vd~~al~~~L~~~~i~~~~lDv~~~ep~-~~~ 121 (180)
..+.++|.|+||.+.+++ ++. |..++...|.. . +...++.++++++|++ +.+.|. +.+
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvV------i~~vp~~~~t 224 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFI------VVACSLTPAT 224 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEE------EECCCCCTTT
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEE------EEeCCCChHH
Confidence 356788999999999886 444 65555444321 1 0011577889999994 444443 233
Q ss_pred CCCCC------C-C-----ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcCC
Q psy5266 122 HPLVQ------L-D-----NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRGG 179 (180)
Q Consensus 122 ~~l~~------~-~-----Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~~ 179 (180)
..+++ + + |+.+| .++++++.++|++|+++|+++||+.+||+++++|||++|||++|+-
T Consensus 225 ~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh 295 (330)
T 2gcg_A 225 EGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPH 295 (330)
T ss_dssp TTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCS
T ss_pred HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCC
Confidence 44543 1 1 66666 8999999999999999999999999999999999999999999873
No 68
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.22 E-value=3.8e-12 Score=107.70 Aligned_cols=115 Identities=21% Similarity=0.284 Sum_probs=87.5
Q ss_pred cCCCCCCcceeCHhHHhc-----cC-C-CcEEEecCCCCcc-C---------HHHHHHHHhcCCcceEEeecCCCCCCC-
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MK-P-TAILINTSRGGLL-D---------QEALVEFLRDKKIGGAGLDVMIPEPLP- 119 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk-~-g~~lvn~~Rg~~v-d---------~~al~~~L~~~~i~~~~lDv~~~ep~~- 119 (180)
..+.++|.|+||.+.+++ ++ . |..++...|..-- + ..++.++++++|+ |+.+.|..
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDv------Vil~vp~~~ 232 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDC------VSVSVPYMK 232 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSE------EEECCCCSG
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCE------EEEeCCCCh
Confidence 357789999999999986 55 5 8777766654211 0 1257788999999 55555542
Q ss_pred CCCCCCC------CC------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcCC
Q psy5266 120 ADHPLVQ------LD------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRGG 179 (180)
Q Consensus 120 ~~~~l~~------~~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~~ 179 (180)
.+..+++ ++ |+.+| .++++++.++|++|+++||++|||.+|| +.++|||++|||++|+-
T Consensus 233 ~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltPH 304 (348)
T 2w2k_A 233 LTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTTH 304 (348)
T ss_dssp GGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECCS
T ss_pred HHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcCc
Confidence 2444553 11 77776 8999999999999999999999999998 77889999999999973
No 69
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.21 E-value=1.7e-12 Score=111.20 Aligned_cols=118 Identities=17% Similarity=0.112 Sum_probs=85.9
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC-----ccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG-----LLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQ 126 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~-----~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~ 126 (180)
..+.++|.|+||.+.+++ ++. |..++...|.. -....++.++++++|++...++.....+. .+..+++
T Consensus 112 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~-~T~~li~ 190 (380)
T 2o4c_A 112 ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEH-PTRHLLD 190 (380)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSS-CCTTSBC
T ss_pred cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCcccccc-chhhhcC
Confidence 356788999999999986 555 77766554421 11234588899999995555555433111 1455554
Q ss_pred C------C------ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 127 L------D------NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 127 ~------~------Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
. + |+.|| +++++++.++|++|++++|++|||++||+| ++|++.. ||++|+
T Consensus 191 ~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~-~~~l~~~-nvi~TP 253 (380)
T 2o4c_A 191 EPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQA-DPELAAR-CLIATP 253 (380)
T ss_dssp HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHTT-CSEECS
T ss_pred HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCC-chhhccC-CEEEcc
Confidence 2 2 77777 899999999999999999999999999954 5788884 999997
No 70
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.21 E-value=1.2e-11 Score=104.11 Aligned_cols=115 Identities=23% Similarity=0.330 Sum_probs=85.7
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCccC--------HHHHHHHHhcCCcceEEeecCCCCCCCCCCCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLLD--------QEALVEFLRDKKIGGAGLDVMIPEPLPADHPL 124 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~vd--------~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l 124 (180)
.+.++|.|+||.+.+++ ++. |..++...|..-.+ ..++.++++++|++..+++.. +.+..+
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~-----~~t~~~ 217 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLT-----RDTYHI 217 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCC-----TTTTTS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCC-----hHHHHH
Confidence 57789999999999986 555 77776665543111 114678899999954444333 234444
Q ss_pred CC------C-C----ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCC-cEEEcCC
Q psy5266 125 VQ------L-D----NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLD-NCEIRGG 179 (180)
Q Consensus 125 ~~------~-~----Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~-nv~it~~ 179 (180)
++ + + |+.+| .++++++.++|++|+++||++||+.+||+| ++|||++| ||++|+-
T Consensus 218 i~~~~~~~mk~gilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nviltPh 284 (333)
T 2d0i_A 218 INEERVKKLEGKYLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLTPH 284 (333)
T ss_dssp BCHHHHHHTBTCEEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEECCS
T ss_pred hCHHHHhhCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEcCc
Confidence 43 1 2 55555 899999999999999999999999999988 89999999 9999973
No 71
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.18 E-value=9e-12 Score=104.78 Aligned_cols=113 Identities=28% Similarity=0.409 Sum_probs=85.6
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCccC--------HHHHHHHHhcCCcceEEeecCCCCCCCC-CCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLLD--------QEALVEFLRDKKIGGAGLDVMIPEPLPA-DHP 123 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~vd--------~~al~~~L~~~~i~~~~lDv~~~ep~~~-~~~ 123 (180)
.+..+|.|+||.+.+++ ++. |..++...|..--+ ..++.++++++|++ +.+.|... +..
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvV------il~vp~~~~t~~ 220 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFV------VLAVPLTRETYH 220 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEE------EECCCCCTTTTT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEE------EECCCCChHHHH
Confidence 56788999999999986 444 66666665543111 12477889999994 44455422 344
Q ss_pred CCC------C-C-----ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 124 LVQ------L-D-----NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 124 l~~------~-~-----Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
+++ + + |+.+| .++++++.++|++|+++|+++||+.+|| +.++|||++|||++|+
T Consensus 221 ~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~tP 287 (334)
T 2dbq_A 221 LINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLTP 287 (334)
T ss_dssp CBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEECS
T ss_pred hhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEECC
Confidence 543 1 1 66676 8999999999999999999999999999 8899999999999987
No 72
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.06 E-value=9.7e-11 Score=104.05 Aligned_cols=115 Identities=21% Similarity=0.278 Sum_probs=86.4
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCccC--------HHHHHHHHhcCCcceEEeecCCCCCCCCCCC
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLLD--------QEALVEFLRDKKIGGAGLDVMIPEPLPADHP 123 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~vd--------~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~ 123 (180)
..+.++|.|+||.+.+++ ++. |..++...|..-.. ..++.++++++|++..+++... .+..
T Consensus 138 ~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~-----~t~~ 212 (529)
T 1ygy_A 138 TEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTP-----ETAG 212 (529)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCST-----TTTT
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCch-----HHHH
Confidence 457789999999999886 555 77777665532100 0147788999999555544431 3344
Q ss_pred CCC------C-C-----ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCCCCcccCCcEEEcC
Q psy5266 124 LVQ------L-D-----NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQLDNCEIRG 178 (180)
Q Consensus 124 l~~------~-~-----Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~~nv~it~ 178 (180)
+++ + + |+.+| +++++++.++|++|+++||++||+..||+ .++|||++|||++|+
T Consensus 213 ~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilTP 279 (529)
T 1ygy_A 213 LIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTP 279 (529)
T ss_dssp CBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEECS
T ss_pred HhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEcc
Confidence 433 2 2 66666 89999999999999999999999999995 689999999999996
No 73
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.70 E-value=3.8e-09 Score=91.85 Aligned_cols=84 Identities=15% Similarity=0.128 Sum_probs=67.1
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc---cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS---KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|+||+. +.||++++.++.+..... ..-+...++++++++||||+.+. .|.++|+.+.|++||+|+++
T Consensus 255 ~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GAIL 330 (464)
T 3n58_A 255 YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMCIV 330 (464)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTEEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCeEE
Confidence 6888885 468888888876543210 11235679999999999999863 58999999999999999999
Q ss_pred EecCCCCc-cCHHHHHH
Q psy5266 83 INTSRGGL-LDQEALVE 98 (180)
Q Consensus 83 vn~~Rg~~-vd~~al~~ 98 (180)
+|++|+.+ +|.++|.+
T Consensus 331 INvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 331 GNIGHFDNEIQVAALRN 347 (464)
T ss_dssp EECSSSTTTBTCGGGTT
T ss_pred EEcCCCCcccCHHHHHh
Confidence 99999997 89888864
No 74
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.63 E-value=1.5e-08 Score=87.95 Aligned_cols=85 Identities=16% Similarity=0.207 Sum_probs=68.6
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc---cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS---KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|.||+. ..||+++..+|++..... ..-+...++++++++||+|++ +..|.++|+.+.+++||+|+++
T Consensus 219 ~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVil----t~gt~~iI~~e~l~~MK~gAIV 294 (436)
T 3h9u_A 219 YGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVT----TTGNDDIITSEHFPRMRDDAIV 294 (436)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE----CSSCSCSBCTTTGGGCCTTEEE
T ss_pred eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEE----CCCCcCccCHHHHhhcCCCcEE
Confidence 5777774 357888888888754211 112356799999999999996 5689999999999999999999
Q ss_pred EecCCCCc-cCHHHHHHH
Q psy5266 83 INTSRGGL-LDQEALVEF 99 (180)
Q Consensus 83 vn~~Rg~~-vd~~al~~~ 99 (180)
+|++|+.. ||.++|.+.
T Consensus 295 INvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 295 CNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp EECSSSGGGBCHHHHHHH
T ss_pred EEeCCCCCccCHHHHHhh
Confidence 99999986 999988764
No 75
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=98.54 E-value=1.1e-09 Score=94.71 Aligned_cols=110 Identities=7% Similarity=-0.017 Sum_probs=80.4
Q ss_pred cCCcccc-----ce-eeeEEEec-cccccCCccceeeccCHHHHhccCCE-EEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HL-IVCVLIRY-HVDLTGGSKQVYLILVIRTRSAQSDF-IFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~D~-v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|+||+. +. ||++++++ |+....+. ....+++++++.+|. .++ +|+ ++|.+ |+.+.|.+||. .++
T Consensus 220 ~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~---~~gvdl~~L~~~~d~~~~l-~~l-~~t~~-i~~~~l~~mk~-dil 292 (419)
T 1gtm_A 220 YGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYN---PDGLNADEVLKWKNEHGSV-KDF-PGATN-ITNEELLELEV-DVL 292 (419)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEEECSSCEEEE---EEEECHHHHHHHHHHHSSS-TTC-TTSEE-ECHHHHHHSCC-SEE
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEeCCCccccC---ccCCCHHHHHHHHHhcCEe-ecC-ccCee-eCHHHHHhCCC-CEE
Confidence 6788885 45 77777777 44321111 122367777775554 333 577 68888 89999999998 599
Q ss_pred EecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCC-CCCCCCCceeec
Q psy5266 83 INTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPAD-HPLVQLDNCGNG 133 (180)
Q Consensus 83 vn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~-~~l~~~~Nv~~g 133 (180)
||++||.++|+++ .++|+.+.|..++ +||++.. ++++.++|+..+
T Consensus 293 In~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~it 338 (419)
T 1gtm_A 293 APAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQI 338 (419)
T ss_dssp EECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEE
T ss_pred EECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEE
Confidence 9999999999999 5888888887776 7886433 688999999875
No 76
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.39 E-value=9.6e-08 Score=82.73 Aligned_cols=83 Identities=14% Similarity=0.251 Sum_probs=65.3
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC---ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG---SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|.||+. +.||++++.+|.+.... ...-+...++++++++||+|+.+ ..|.++|+.+.|.+||+|+++
T Consensus 228 ~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~gail 303 (435)
T 3gvp_A 228 YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSCIV 303 (435)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTEEE
T ss_pred eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCcEE
Confidence 5778875 36788888888764310 01123567999999999999994 578999999999999999999
Q ss_pred EecCCCCc-cCHHHHH
Q psy5266 83 INTSRGGL-LDQEALV 97 (180)
Q Consensus 83 vn~~Rg~~-vd~~al~ 97 (180)
+|++|+.. +|.+.+.
T Consensus 304 INvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 304 CNMGHSNTEIDVASLR 319 (435)
T ss_dssp EECSSTTTTBTGGGGC
T ss_pred EEecCCCccCCHHHHH
Confidence 99999986 7776654
No 77
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.36 E-value=2.2e-07 Score=76.40 Aligned_cols=75 Identities=9% Similarity=0.060 Sum_probs=59.2
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc------cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCC
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS------KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g 79 (180)
.|+||+. +.+|+++..||++..... .......++++++++||+|++|+|+ ++++.+.+++||++
T Consensus 165 ~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g 239 (300)
T 2rir_A 165 LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-----MILNQTVLSSMTPK 239 (300)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTT
T ss_pred ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCC
Confidence 6777774 357888999988764211 1122357899999999999999997 79999999999999
Q ss_pred cEEEecCCCCc
Q psy5266 80 AILINTSRGGL 90 (180)
Q Consensus 80 ~~lvn~~Rg~~ 90 (180)
+++||++|+..
T Consensus 240 ~~lin~a~g~~ 250 (300)
T 2rir_A 240 TLILDLASRPG 250 (300)
T ss_dssp CEEEECSSTTC
T ss_pred CEEEEEeCCCC
Confidence 99999999753
No 78
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.33 E-value=3.1e-07 Score=75.38 Aligned_cols=75 Identities=9% Similarity=-0.014 Sum_probs=58.8
Q ss_pred cCCcccc-----ceeeeEEEeccccccCCc------cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCC
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGGS------KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g 79 (180)
.|+||+. +.+|+++..|+++..... .......++++++++||+|++|+|+ ++++.+.+++||++
T Consensus 163 ~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~ 237 (293)
T 3d4o_A 163 LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSH 237 (293)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTT
T ss_pred eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCC
Confidence 6777774 357888888888754210 0112346899999999999999996 79999999999999
Q ss_pred cEEEecCCCCc
Q psy5266 80 AILINTSRGGL 90 (180)
Q Consensus 80 ~~lvn~~Rg~~ 90 (180)
+++||++|+..
T Consensus 238 ~~lin~ar~~~ 248 (293)
T 3d4o_A 238 TFVIDLASKPG 248 (293)
T ss_dssp CEEEECSSTTC
T ss_pred CEEEEecCCCC
Confidence 99999999753
No 79
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.32 E-value=7.8e-08 Score=84.76 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=82.7
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC----ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG----SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
.|.||+. ..+|++++.+|++.... ..+ ....+++++++.+|+|+.|.+ |.++|+...++.||+|++
T Consensus 282 ~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-a~~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~~mk~ggi 356 (494)
T 3ce6_A 282 YGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-FDVVTVEEAIGDADIVVTATG----NKDIIMLEHIKAMKDHAI 356 (494)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-CEECCHHHHGGGCSEEEECSS----SSCSBCHHHHHHSCTTCE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-CEEecHHHHHhCCCEEEECCC----CHHHHHHHHHHhcCCCcE
Confidence 5777764 34678888888765431 111 235689999999999999964 667899999999999999
Q ss_pred EEecCCCCc-cCHHHHHH-HHhcCCcceEEeecCCCCCCCCCCC--CCCCCcee
Q psy5266 82 LINTSRGGL-LDQEALVE-FLRDKKIGGAGLDVMIPEPLPADHP--LVQLDNCG 131 (180)
Q Consensus 82 lvn~~Rg~~-vd~~al~~-~L~~~~i~~~~lDv~~~ep~~~~~~--l~~~~Nv~ 131 (180)
++|++|+.. +|..+|.+ .++++.+. ..+|++..++. .++ ++...|+.
T Consensus 357 lvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~--~~~l~LL~~grlv 407 (494)
T 3ce6_A 357 LGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT--GRSIIVLSEGRLL 407 (494)
T ss_dssp EEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT--CCEEEEEGGGSCH
T ss_pred EEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc--chHHHHHhCCCEE
Confidence 999999998 89999887 77777775 56787654221 233 44455553
No 80
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.09 E-value=1.2e-07 Score=83.29 Aligned_cols=106 Identities=12% Similarity=0.114 Sum_probs=79.6
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc---------CHHHHHHHHhcCCcceEEeecCCCCCCCCCCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL---------DQEALVEFLRDKKIGGAGLDVMIPEPLPADHP 123 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v---------d~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~ 123 (180)
.+.++|.++||.+.+++ ++. |+.++-..|...- ...++.++++++|++..+. .+..
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~---------~t~~ 324 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT---------GNVD 324 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC---------SSSS
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC---------Chhh
Confidence 57799999999999986 555 7777776665321 1124788899999965542 1222
Q ss_pred CCC------CC------ceeec-c-cCHHHHHH--HHHccccccccccCCCCCCCCCCCCcccC--CcEEEc
Q psy5266 124 LVQ------LD------NCGNG-L-LDQEALVE--FLRDKKIGGAGLDVMIPEPMPADHPLVQL--DNCEIR 177 (180)
Q Consensus 124 l~~------~~------Nv~~g-~-~~~~al~~--~L~~g~l~ga~ldV~~~Eplp~~~pl~~~--~nv~it 177 (180)
+++ ++ |+.++ . ++++++.+ +|++|+|+ +++||+ |+|+++|+|.+ |||++|
T Consensus 325 lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nvv~t 392 (479)
T 1v8b_A 325 VIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPNGNKIIVLARGRLLNL 392 (479)
T ss_dssp SBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH
T ss_pred hcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCCCCeeeEecCCCEEEE
Confidence 332 22 77776 6 79999999 99999998 889997 66778999999 999998
No 81
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.05 E-value=7.4e-08 Score=84.85 Aligned_cols=105 Identities=10% Similarity=0.052 Sum_probs=77.5
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc---------CHHHHHHHHhcCCcceEEeecCCCCCCCCCCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL---------DQEALVEFLRDKKIGGAGLDVMIPEPLPADHP 123 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v---------d~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~ 123 (180)
.+.++|.++||.+.+++ ++. |+.++-..|...- ...++.++++++|++..++ .+..
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~---------~t~~ 344 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT---------GNYH 344 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS---------SSSC
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC---------Cccc
Confidence 47789999999999986 566 8888777665321 1124788999999965553 2333
Q ss_pred CCC------CC------ceeec-c-cCHHHHHHHHHccccccccccCCCCCCCCCCCCcccC--CcEEEc
Q psy5266 124 LVQ------LD------NCGNG-L-LDQEALVEFLRDKKIGGAGLDVMIPEPMPADHPLVQL--DNCEIR 177 (180)
Q Consensus 124 l~~------~~------Nv~~g-~-~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~~pl~~~--~nv~it 177 (180)
+++ ++ |+++| . +++++| ++|++|+|+ +++|+ +|+|.++|||.+ |||++|
T Consensus 345 lI~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t 409 (494)
T 3d64_A 345 VINHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL 409 (494)
T ss_dssp SBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH
T ss_pred ccCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE
Confidence 443 22 77777 5 599999 999999997 55555 588889999999 999998
No 82
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.98 E-value=1.8e-06 Score=73.37 Aligned_cols=98 Identities=16% Similarity=0.296 Sum_probs=72.1
Q ss_pred cCCcccc-----ceeeeEEEeccccccC--Cccc-----e----eeccCHHHHhccCCEEEEcc--CCCCCCcceeCHhH
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTG--GSKQ-----V----YLILVIRTRSAQSDFIFVTC--ALTKDTEQLIGRKQ 72 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~--~~~~-----~----~~~~~l~~l~~~~D~v~~h~--pl~~~T~glIg~~~ 72 (180)
.|.||+. ..+|+++..+|++... ...+ . ....+++++++.+|+|+.++ |.+ +|.++|+.+.
T Consensus 176 ~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~~li~~~~ 254 (377)
T 2vhw_A 176 AGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAPKLVSNSL 254 (377)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHH
T ss_pred CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCcceecHHH
Confidence 4666663 3578888898876542 1111 0 12457889999999999955 665 8999999999
Q ss_pred HhccCCCcEEEecC--CCCccCHHHHHHHHhcCCcceEEeecCCC-CCCCCCCCCCCCCcee
Q psy5266 73 FSLMKPTAILINTS--RGGLLDQEALVEFLRDKKIGGAGLDVMIP-EPLPADHPLVQLDNCG 131 (180)
Q Consensus 73 i~~mk~g~~lvn~~--Rg~~vd~~al~~~L~~~~i~~~~lDv~~~-ep~~~~~~l~~~~Nv~ 131 (180)
++.||+|.++||++ +|+ +++. ||.+.+.+++..+|+.
T Consensus 255 l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~ 294 (377)
T 2vhw_A 255 VAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTL 294 (377)
T ss_dssp HTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEE
T ss_pred HhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEE
Confidence 99999999999998 332 4555 6766678888888887
No 83
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=97.35 E-value=8.8e-06 Score=70.31 Aligned_cols=116 Identities=14% Similarity=0.246 Sum_probs=80.0
Q ss_pred CHHHHhccCCEEEEccC-CCCCCcceeCHhHHhc-----cC--CCcEEEecCC--CCc-----cCHHHHHHHHhcCCcce
Q psy5266 43 VIRTRSAQSDFIFVTCA-LTKDTEQLIGRKQFSL-----MK--PTAILINTSR--GGL-----LDQEALVEFLRDKKIGG 107 (180)
Q Consensus 43 ~l~~l~~~~D~v~~h~p-l~~~T~glIg~~~i~~-----mk--~g~~lvn~~R--g~~-----vd~~al~~~L~~~~i~~ 107 (180)
.+++.++.. ... +.++|.+++|.+.+++ ++ -|+.++.+++ +.+ ++.++|.+..+..+.
T Consensus 197 ~~~~~~~~~-----G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~~~gvdl~~L~~~~d~~~~-- 269 (419)
T 1gtm_A 197 TIREAAKVL-----GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGS-- 269 (419)
T ss_dssp HHHHHHHHT-----TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHHHHHHSS--
T ss_pred HHHHHHHHh-----CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccCccCCCHHHHHHHHHhcCE--
Confidence 455656542 356 7899999999999886 32 4778876643 322 467777777665333
Q ss_pred EEeecCCCCCCCCCC-----CCCCCC-----ceeec-ccCHHHHHHHHHccccccccccCCCCCCCCCC-CCcccCCcEE
Q psy5266 108 AGLDVMIPEPLPADH-----PLVQLD-----NCGNG-LLDQEALVEFLRDKKIGGAGLDVMIPEPMPAD-HPLVQLDNCE 175 (180)
Q Consensus 108 ~~lDv~~~ep~~~~~-----~l~~~~-----Nv~~g-~~~~~al~~~L~~g~l~ga~ldV~~~Eplp~~-~pl~~~~nv~ 175 (180)
+ .|++.++ .++.++ |++|| .+++++ .++|+.+.|++++ +||++++ +|+|+++||+
T Consensus 270 ----l---~~l~~t~~i~~~~l~~mk~dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~ 336 (419)
T 1gtm_A 270 ----V---KDFPGATNITNEELLELEVDVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGIL 336 (419)
T ss_dssp ----S---TTCTTSEEECHHHHHHSCCSEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCE
T ss_pred ----e---ecCccCeeeCHHHHHhCCCCEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEE
Confidence 1 1222222 233333 77776 899999 6899999999988 7887664 7999999999
Q ss_pred EcC
Q psy5266 176 IRG 178 (180)
Q Consensus 176 it~ 178 (180)
+|+
T Consensus 337 itP 339 (419)
T 1gtm_A 337 QIP 339 (419)
T ss_dssp EEC
T ss_pred EEC
Confidence 997
No 84
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.28 E-value=0.00014 Score=61.51 Aligned_cols=88 Identities=11% Similarity=0.104 Sum_probs=67.1
Q ss_pred cCCcccc-----ceeeeEEEeccccccC--Cccc-eeeccCHHHHhc-cCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTG--GSKQ-VYLILVIRTRSA-QSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~l~~-~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
-|+||+. +.+|++++.+|.+... +.+. -....+++++++ .|||++-+ +|.++|+.+.+.+|| ..+
T Consensus 183 ~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-----A~~~~I~~~~~~~lk-~~i 256 (355)
T 1c1d_A 183 LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-----AMGGVITTEVARTLD-CSV 256 (355)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-----SCSCCBCHHHHHHCC-CSE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-----HHHhhcCHHHHhhCC-CCE
Confidence 4667763 4688999999887532 1111 123457789998 99999743 789999999999998 679
Q ss_pred EEecCCCCccCHHHHHHHHhcCCc
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKI 105 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i 105 (180)
++|.+++.+.++++ .++|+++.+
T Consensus 257 Vie~AN~p~t~~eA-~~~L~~~gI 279 (355)
T 1c1d_A 257 VAGAANNVIADEAA-SDILHARGI 279 (355)
T ss_dssp ECCSCTTCBCSHHH-HHHHHHTTC
T ss_pred EEECCCCCCCCHHH-HHHHHhCCE
Confidence 99999999999777 578888877
No 85
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.17 E-value=7.4e-05 Score=63.10 Aligned_cols=102 Identities=18% Similarity=0.248 Sum_probs=57.5
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC--cc-----ce----eeccCHHHHhccCCEEEEccCCCC-CCcceeCHhHH
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG--SK-----QV----YLILVIRTRSAQSDFIFVTCALTK-DTEQLIGRKQF 73 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~--~~-----~~----~~~~~l~~l~~~~D~v~~h~pl~~-~T~glIg~~~i 73 (180)
.|.||+. ..+|+++..+|.+.... .. .. ....+++++++.+|+|+.+++... .+..++....+
T Consensus 174 aG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l 253 (369)
T 2eez_A 174 GGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDML 253 (369)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCSCHHHH
T ss_pred CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHH
Confidence 3566653 24678888888764320 10 11 124568899999999999999876 68899999999
Q ss_pred hccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCcee
Q psy5266 74 SLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCG 131 (180)
Q Consensus 74 ~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~ 131 (180)
..||++.++||++-. .+ ++ +|++ ||.+.+.+++..+|+.
T Consensus 254 ~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~ 292 (369)
T 2eez_A 254 SLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVV 292 (369)
T ss_dssp TTSCTTCEEEECC--------------------------------------CEETTEE
T ss_pred HhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEE
Confidence 999999999999721 11 33 7777 5555567777778776
No 86
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.11 E-value=0.00037 Score=59.68 Aligned_cols=50 Identities=22% Similarity=0.375 Sum_probs=42.8
Q ss_pred CHHHHhccCCEEEEc--cCCCCCCcceeCHhHHhccCCCcEEEecC--CCCccCH
Q psy5266 43 VIRTRSAQSDFIFVT--CALTKDTEQLIGRKQFSLMKPTAILINTS--RGGLLDQ 93 (180)
Q Consensus 43 ~l~~l~~~~D~v~~h--~pl~~~T~glIg~~~i~~mk~g~~lvn~~--Rg~~vd~ 93 (180)
+++++++.+|+|+.+ +|. .++..+|+.+.+++||+|.++|+++ ||+.+++
T Consensus 248 ~l~e~~~~aDvVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 248 LFAAQAKEVDIIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHHHCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHHhCCCCEEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 478899999999999 443 3477999999999999999999999 8887765
No 87
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.07 E-value=0.00043 Score=59.48 Aligned_cols=52 Identities=21% Similarity=0.512 Sum_probs=42.2
Q ss_pred cCHHHHhccCCEEEEccCCC-CCCcceeCHhHHhccCCCcEEEecC--CCCccCH
Q psy5266 42 LVIRTRSAQSDFIFVTCALT-KDTEQLIGRKQFSLMKPTAILINTS--RGGLLDQ 93 (180)
Q Consensus 42 ~~l~~l~~~~D~v~~h~pl~-~~T~glIg~~~i~~mk~g~~lvn~~--Rg~~vd~ 93 (180)
.+|++.+++||+|+.++... ..+..+|+++.+++||+|+++|+++ +|+.++.
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 37899999999998764322 2577899999999999999999998 7776544
No 88
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.00 E-value=8.8e-05 Score=60.92 Aligned_cols=104 Identities=8% Similarity=-0.011 Sum_probs=74.3
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
+|.+|+.+ -.|..+..||++..... .+.....++++++++||+|++++|-...+..+++.+.+..+++|.+
T Consensus 17 ~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~i 96 (306)
T 3l6d_A 17 LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVARALAHRT 96 (306)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHHTTTCE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhhccCCCE
Confidence 56777751 12346677776654211 1334567999999999999999997766777775435667889999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCcceEEeecCC
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKIGGAGLDVMI 114 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~ 114 (180)
+|+++.........+.+.+++..+.++-.+|+-
T Consensus 97 vid~st~~~~~~~~l~~~~~~~g~~~vdapv~g 129 (306)
T 3l6d_A 97 IVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVA 129 (306)
T ss_dssp EEECCCCCTTHHHHHHHHHHHTTCEEEEEEEES
T ss_pred EEECCCCCHHHHHHHHHHHHHcCCeEEeccccc
Confidence 999999888888888888887666555445653
No 89
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.99 E-value=0.0006 Score=55.58 Aligned_cols=101 Identities=15% Similarity=0.101 Sum_probs=72.8
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
+|.+|+.+ --|..+..||.+..... .+.....+++++.+ ||+|++++|-......++ .+....++++.+
T Consensus 23 ~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~~~l~~g~i 100 (296)
T 3qha_A 23 LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELAGHAKPGTV 100 (296)
T ss_dssp CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHHTTCCTTCE
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHHHhcCCCCE
Confidence 67777751 12456777877665321 22345679999999 999999999766666666 666777999999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
+|+.+.........+.+.+++..+.+...+++
T Consensus 101 vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 132 (296)
T 3qha_A 101 IAIHSTISDTTAVELARDLKARDIHIVDAPVS 132 (296)
T ss_dssp EEECSCCCHHHHHHHHHHHGGGTCEEEECCEE
T ss_pred EEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence 99999888777788888888766655444454
No 90
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.98 E-value=0.00039 Score=57.36 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=73.6
Q ss_pred cCCccccc-----eeeeEEEeccccccCC----ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCH-hHHhccCCCc
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGG----SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGR-KQFSLMKPTA 80 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~-~~i~~mk~g~ 80 (180)
+|.+|+.+ -.|..+..||++.... ..+.....++++++++||+|++++|-......++.. +.+..++++.
T Consensus 39 ~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~ 118 (320)
T 4dll_A 39 TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGS 118 (320)
T ss_dssp CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTC
T ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCCC
Confidence 67888751 1245677887765431 123455679999999999999999976555555533 4566789999
Q ss_pred EEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 81 ILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 81 ~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
++|+++.......+.+.+.+++..+..+..+|+
T Consensus 119 ~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 151 (320)
T 4dll_A 119 LFLDMASITPREARDHAARLGALGIAHLDTPVS 151 (320)
T ss_dssp EEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred EEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence 999999988878888888888776654444444
No 91
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.89 E-value=0.00044 Score=58.97 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=58.6
Q ss_pred cCCcccc-----ceeeeEEEeccccccC--Cccce---------------------------eeccCHHHHhccCCEEEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTG--GSKQV---------------------------YLILVIRTRSAQSDFIFV 56 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~--~~~~~---------------------------~~~~~l~~l~~~~D~v~~ 56 (180)
.|.+|.. +.+|+++..||.+... ..++. ....++++.+++||+|+.
T Consensus 192 ~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~ 271 (381)
T 3p2y_A 192 VGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVIT 271 (381)
T ss_dssp CSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred chHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEE
Confidence 4666663 4678899999887642 11100 012468899999999987
Q ss_pred cc--CCCCCCcceeCHhHHhccCCCcEEEecC--CCCccC
Q psy5266 57 TC--ALTKDTEQLIGRKQFSLMKPTAILINTS--RGGLLD 92 (180)
Q Consensus 57 h~--pl~~~T~glIg~~~i~~mk~g~~lvn~~--Rg~~vd 92 (180)
++ |. .++..+|+++.+++||+|+++|+++ +|+.+.
T Consensus 272 tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 272 TALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE 310 (381)
T ss_dssp CCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred CCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence 65 53 3467899999999999999999997 666655
No 92
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.74 E-value=0.00072 Score=54.61 Aligned_cols=103 Identities=10% Similarity=-0.090 Sum_probs=70.4
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCccee-C-HhHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLI-G-RKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glI-g-~~~i~~mk~g 79 (180)
+|.+|+.+ -.|..+..||++..... .+.....++++++++||+|++++|-...+..++ + .+.+..++++
T Consensus 9 ~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g 88 (287)
T 3pdu_A 9 LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGG 88 (287)
T ss_dssp CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTT
T ss_pred cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCC
Confidence 57777751 12456777877655321 123456799999999999999999765555544 1 3445668899
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
.++|+++.........+.+.+++..+.+...+++
T Consensus 89 ~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 122 (287)
T 3pdu_A 89 RGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVS 122 (287)
T ss_dssp CEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCCEEEECCcc
Confidence 9999999988777778888887765544333333
No 93
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.55 E-value=0.0018 Score=53.06 Aligned_cols=104 Identities=11% Similarity=0.056 Sum_probs=74.3
Q ss_pred cCCccccc---ee--eeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQVH---LI--VCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~~---~~--~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
+|.+|+-+ +. |-.+..||++..... .+.....++.|+.+.||+|++++|-.......+....+..++++.+
T Consensus 13 LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~i 92 (297)
T 4gbj_A 13 LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDGV 92 (297)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTCE
T ss_pred cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCeE
Confidence 57777651 11 346778887765422 2345677999999999999999997777777777788889999999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCcceEEeecCC
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKIGGAGLDVMI 114 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~ 114 (180)
+|+.+-...-....+.+.+++..+.++-.+|+-
T Consensus 93 iid~sT~~p~~~~~~~~~~~~~g~~~ldapVsG 125 (297)
T 4gbj_A 93 HVSMSTISPETSRQLAQVHEWYGAHYVGAPIFA 125 (297)
T ss_dssp EEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred EEECCCCChHHHHHHHHHHHhcCCceecCCcCC
Confidence 999987776667788888888888766666653
No 94
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.53 E-value=0.0036 Score=52.93 Aligned_cols=47 Identities=21% Similarity=0.337 Sum_probs=39.0
Q ss_pred HHHHhccCCEEEEcc--CCCCCCcceeCHhHHhccCCCcEEEecC--CCCcc
Q psy5266 44 IRTRSAQSDFIFVTC--ALTKDTEQLIGRKQFSLMKPTAILINTS--RGGLL 91 (180)
Q Consensus 44 l~~l~~~~D~v~~h~--pl~~~T~glIg~~~i~~mk~g~~lvn~~--Rg~~v 91 (180)
++++++.+|+|+.+. |.. .+.++++.+.++.||+|.++++++ ||+.+
T Consensus 251 l~~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~ 301 (384)
T 1l7d_A 251 VLKELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNC 301 (384)
T ss_dssp HHHHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred HHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCe
Confidence 888999999999766 332 356889999999999999999998 77654
No 95
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.48 E-value=0.0018 Score=54.57 Aligned_cols=102 Identities=11% Similarity=0.106 Sum_probs=74.8
Q ss_pred cCCccccc-----eeeeEEEeccccccCC----ccceeeccCHHHHhccC---CEEEEccCCCCCCcceeCHhHHhccCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGG----SKQVYLILVIRTRSAQS---DFIFVTCALTKDTEQLIGRKQFSLMKP 78 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~---D~v~~h~pl~~~T~glIg~~~i~~mk~ 78 (180)
+|.+|+.+ --|..+..||.+.... ..+.....+++++++.+ |+|++++|-. .+..++ .+.+..+++
T Consensus 30 lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl-~~l~~~l~~ 107 (358)
T 4e21_A 30 LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML-QRMTPLLAA 107 (358)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH-HHHGGGCCT
T ss_pred chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH-HHHHhhCCC
Confidence 56777651 1245677787765421 12234567899999999 9999999977 767666 456667899
Q ss_pred CcEEEecCCCCccCHHHHHHHHhcCCcceEEeecCC
Q psy5266 79 TAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVMI 114 (180)
Q Consensus 79 g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~ 114 (180)
+.++|+.+.....+...+.+.+++..+.+...+|+-
T Consensus 108 g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 108 NDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred CCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 999999999887788888888888877766666654
No 96
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.27 E-value=0.00067 Score=55.07 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=67.2
Q ss_pred cCCccccc-----eeeeEEEeccccccCC----ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCH--hHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGG----SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGR--KQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~--~~i~~mk~g 79 (180)
.|.+|+.+ -.|..+..||++.... ..+.....++++++++||+|++++|-......++.. +.+..++++
T Consensus 11 ~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~ 90 (302)
T 2h78_A 11 LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPG 90 (302)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSS
T ss_pred ecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCCC
Confidence 57777751 1245677777664421 123445679999999999999999966555555431 445568899
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCcce
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKIGG 107 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i~~ 107 (180)
.++|+++.......+.+.+.+++..+..
T Consensus 91 ~~vi~~st~~~~~~~~l~~~~~~~g~~~ 118 (302)
T 2h78_A 91 TLVLECSTIAPTSARKIHAAARERGLAM 118 (302)
T ss_dssp CEEEECSCCCHHHHHHHHHHHHHTTCCE
T ss_pred cEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 9999998887777778888887754433
No 97
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.09 E-value=0.0042 Score=50.78 Aligned_cols=102 Identities=8% Similarity=-0.083 Sum_probs=69.7
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCccee--CHhHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLI--GRKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glI--g~~~i~~mk~g 79 (180)
+|.+|+.+ --|..+..||++..... .+.....++++++++||+|++++|-...+..++ ..+.+..++++
T Consensus 29 ~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g 108 (310)
T 3doj_A 29 LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEG 108 (310)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTT
T ss_pred ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCC
Confidence 56667651 12456778887655321 123456799999999999999999765555554 23445678999
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCcceEEeec
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKIGGAGLDV 112 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv 112 (180)
.++|+++.........+.+.+++..+..+..+|
T Consensus 109 ~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv 141 (310)
T 3doj_A 109 KGYIDMSTVDAETSLKINEAITGKGGRFVEGPV 141 (310)
T ss_dssp CEEEECSCCCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 999999987777777888888776554433333
No 98
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.04 E-value=0.0046 Score=49.80 Aligned_cols=103 Identities=9% Similarity=-0.069 Sum_probs=70.3
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCccee--CHhHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLI--GRKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glI--g~~~i~~mk~g 79 (180)
+|.+|+.+ -.|..+..||++..... .+.....++++++++||+|++++|-......++ ..+....++++
T Consensus 9 ~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~ 88 (287)
T 3pef_A 9 LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEG 88 (287)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTT
T ss_pred ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCC
Confidence 46666651 12456778887765321 133456799999999999999999655555554 13455668999
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
.++|+++.........+.+.+++..+.....+++
T Consensus 89 ~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 122 (287)
T 3pef_A 89 RGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVS 122 (287)
T ss_dssp CEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred CEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCc
Confidence 9999998877777778888887765544333333
No 99
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.91 E-value=0.00045 Score=56.41 Aligned_cols=103 Identities=13% Similarity=0.039 Sum_probs=68.3
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceee-ccCHHHHhccCCEEEEccCCCCCCcceeC--HhHHhccCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYL-ILVIRTRSAQSDFIFVTCALTKDTEQLIG--RKQFSLMKP 78 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~-~~~l~~l~~~~D~v~~h~pl~~~T~glIg--~~~i~~mk~ 78 (180)
+|.+|+.. --|..+..||++..... .+... ..++++++++||+|++++|-......++- .+....+++
T Consensus 15 ~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~ 94 (303)
T 3g0o_A 15 LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKP 94 (303)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCC
Confidence 56667651 12346777776654211 12233 67899999999999999997655555442 344566889
Q ss_pred CcEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 79 TAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 79 g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
+.++|+++.........+.+.+++..+.+...+++
T Consensus 95 g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 129 (303)
T 3g0o_A 95 GSAVMVSSTISSADAQEIAAALTALNLNMLDAPVS 129 (303)
T ss_dssp TCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEE
T ss_pred CCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCC
Confidence 99999999887777778888887765544333333
No 100
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.90 E-value=0.0025 Score=52.32 Aligned_cols=102 Identities=12% Similarity=0.060 Sum_probs=67.2
Q ss_pred cCCccccc-----eeee-EEEeccccc--cC----CccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCC
Q psy5266 11 TGTPGQVH-----LIVC-VLIRYHVDL--TG----GSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKP 78 (180)
Q Consensus 11 ~G~iG~~~-----~~~~-~~~~~~~~~--~~----~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~ 78 (180)
+|.+|+.. --|. .+..||.+. .. ...+.....++++++++||+|++++|-..... .+ .+....+++
T Consensus 32 ~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~ 109 (312)
T 3qsg_A 32 FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALE-VA-QQAGPHLCE 109 (312)
T ss_dssp CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHH-HH-HHHGGGCCT
T ss_pred ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHH-HH-HhhHhhcCC
Confidence 56666641 0144 777888752 11 11233456789999999999999999664333 33 455566889
Q ss_pred CcEEEecCCCCccCHHHHHHHHhcC--CcceEEeecCC
Q psy5266 79 TAILINTSRGGLLDQEALVEFLRDK--KIGGAGLDVMI 114 (180)
Q Consensus 79 g~~lvn~~Rg~~vd~~al~~~L~~~--~i~~~~lDv~~ 114 (180)
+.++|+.+.........+.+.+.+. .+..+.-+|+-
T Consensus 110 ~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g 147 (312)
T 3qsg_A 110 GALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMS 147 (312)
T ss_dssp TCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccC
Confidence 9999999887777777777777765 44444345554
No 101
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.79 E-value=0.0034 Score=54.82 Aligned_cols=102 Identities=10% Similarity=0.002 Sum_probs=70.4
Q ss_pred cCCccccc-----eeeeEEEeccccccC---Ccc-----ceeeccCHHHHhcc---CCEEEEccCCCCCCcceeCHhHHh
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTG---GSK-----QVYLILVIRTRSAQ---SDFIFVTCALTKDTEQLIGRKQFS 74 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~---~~~-----~~~~~~~l~~l~~~---~D~v~~h~pl~~~T~glIg~~~i~ 74 (180)
+|.+|+.. --|..+..|+++... ..+ +.....+++++++. +|+|++++|-...+..++ .+...
T Consensus 23 lG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl-~~l~~ 101 (480)
T 2zyd_A 23 MAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAI-DSLKP 101 (480)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHH-HHHGG
T ss_pred cHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHH-HHHHh
Confidence 56666651 013356677665432 111 34456789999887 999999999877777787 35556
Q ss_pred ccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 75 LMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 75 ~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
.+++|.++|+++.+...+...+.+.+++..+.....+|+
T Consensus 102 ~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~ 140 (480)
T 2zyd_A 102 YLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVS 140 (480)
T ss_dssp GCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccc
Confidence 788899999999987777777888887755544444554
No 102
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.77 E-value=0.00084 Score=54.20 Aligned_cols=96 Identities=15% Similarity=0.103 Sum_probs=65.0
Q ss_pred cCCccccc-----eeeeEEEeccccccCC----ccceeeccCHHHHhccCCEEEEccCCCCCCcceeC--HhHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGG----SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIG--RKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg--~~~i~~mk~g 79 (180)
.|.+|+.+ -.|..+..||++.... ..+.....+++++++++|+|++++|-......++. .+....++++
T Consensus 13 ~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~ 92 (299)
T 1vpd_A 13 LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPG 92 (299)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTT
T ss_pred chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCC
Confidence 57777752 1134566777654321 01234567899999999999999996655555552 2344568899
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCcc
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKIG 106 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i~ 106 (180)
.++|+++.+...+.+.+.+.+.+..+.
T Consensus 93 ~~vv~~s~~~~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 93 TVLIDMSSIAPLASREISDALKAKGVE 119 (299)
T ss_dssp CEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 999999888766677888888775443
No 103
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=95.75 E-value=0.0036 Score=50.26 Aligned_cols=94 Identities=11% Similarity=-0.001 Sum_probs=62.8
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCH--hHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGR--KQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~--~~i~~mk~g 79 (180)
.|.+|+.+ -.|..+..|+ +..... .+.....+++++++++|+|++++|-...+..++.. +....++++
T Consensus 11 ~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~ 89 (295)
T 1yb4_A 11 LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQG 89 (295)
T ss_dssp CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTT
T ss_pred cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCC
Confidence 57788752 1244667777 543211 12334568999999999999999966544444432 333458889
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCc
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKI 105 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i 105 (180)
.++++++.+...+.+.+.+.+++..+
T Consensus 90 ~~vv~~s~~~~~~~~~l~~~~~~~g~ 115 (295)
T 1yb4_A 90 KTIVDMSSISPIETKRFAQRVNEMGA 115 (295)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHTTTE
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 99999998876667788888876433
No 104
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.46 E-value=0.007 Score=49.65 Aligned_cols=103 Identities=12% Similarity=0.109 Sum_probs=74.3
Q ss_pred cCCcccc---cee--eeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeC--HhHHhccCCC
Q psy5266 11 TGTPGQV---HLI--VCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIG--RKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~---~~~--~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg--~~~i~~mk~g 79 (180)
+|.+|+- +++ |-.+..||.+..... .+.....|+.|+.+.||+|+.++|-.+....++. .+.+..+++|
T Consensus 11 lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g 90 (300)
T 3obb_A 11 LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPG 90 (300)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-
T ss_pred ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCC
Confidence 5777765 111 346677877765421 2345678999999999999999997766555542 2456779999
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
.++|+.+-...-+...+.+.+++..+.++-.+|+
T Consensus 91 ~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVs 124 (300)
T 3obb_A 91 TLVLECSTIAPTSARKIHAAARERGLAMLDAPVS 124 (300)
T ss_dssp CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEE
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 9999999887777888999999888866655555
No 105
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.35 E-value=0.0023 Score=51.63 Aligned_cols=95 Identities=14% Similarity=0.102 Sum_probs=64.2
Q ss_pred cCCccccc-----eeeeEEEeccccccCC----ccceeeccCHHHHhccCCEEEEccCCCCCCcceeC--HhHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGG----SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIG--RKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg--~~~i~~mk~g 79 (180)
.|.+|+.+ -.|..+..|+++.... ..+.....+++++++++|+|++++|-...+..++. .+....++++
T Consensus 12 ~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~ 91 (301)
T 3cky_A 12 LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAG 91 (301)
T ss_dssp CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTT
T ss_pred ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCC
Confidence 57788762 0134566777654321 11334567899999999999999996655555653 2445568899
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCc
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKI 105 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i 105 (180)
.++++++.+...+.+.+.+.+++..+
T Consensus 92 ~~vv~~~~~~~~~~~~l~~~~~~~g~ 117 (301)
T 3cky_A 92 TVIVDMSSVSPSSTLKMAKVAAEKGI 117 (301)
T ss_dssp CEEEECCCCCHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 99999988765567778888876444
No 106
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=94.31 E-value=0.0029 Score=48.86 Aligned_cols=74 Identities=18% Similarity=0.197 Sum_probs=48.0
Q ss_pred cCCccccceeeeEEEeccccccCCccc---------eeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQVHLIVCVLIRYHVDLTGGSKQ---------VYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
.|++|+. ++..+...+.++..+.+. -....+++++++++|+|++++|.. .+..++ .+..++++.+
T Consensus 27 ~G~mG~~--la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~---~l~~~~~~~i 100 (201)
T 2yjz_A 27 TGDFGKS--LGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA---ELADSLKGRV 100 (201)
Confidence 6888887 555443332222221110 112237888999999999999964 566776 2455677899
Q ss_pred EEecCCCCc
Q psy5266 82 LINTSRGGL 90 (180)
Q Consensus 82 lvn~~Rg~~ 90 (180)
+|++++|--
T Consensus 101 vI~~~~G~~ 109 (201)
T 2yjz_A 101 LIDVSNNQK 109 (201)
Confidence 999998864
No 107
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.21 E-value=0.014 Score=48.05 Aligned_cols=119 Identities=13% Similarity=0.047 Sum_probs=68.6
Q ss_pred cCCccccc-----eeee--EEEeccccccCCc----cce--eeccCHHH-HhccCCEEEEccCCCCCCcceeCHhHHhcc
Q psy5266 11 TGTPGQVH-----LIVC--VLIRYHVDLTGGS----KQV--YLILVIRT-RSAQSDFIFVTCALTKDTEQLIGRKQFSLM 76 (180)
Q Consensus 11 ~G~iG~~~-----~~~~--~~~~~~~~~~~~~----~~~--~~~~~l~~-l~~~~D~v~~h~pl~~~T~glIg~~~i~~m 76 (180)
+|.||+.. --|. .+..||++..... .+. ....++++ ++++||+|++++|... +..++ .+....+
T Consensus 41 ~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~-~~~vl-~~l~~~l 118 (314)
T 3ggo_A 41 VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT-FREIA-KKLSYIL 118 (314)
T ss_dssp CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGG-HHHHH-HHHHHHS
T ss_pred eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHH-HHHHH-HHHhhcc
Confidence 57777751 0123 6777777653211 111 23467888 8999999999999653 34444 3445568
Q ss_pred CCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecCCCC---CCCCCCCCCCCCceeec
Q psy5266 77 KPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPE---PLPADHPLVQLDNCGNG 133 (180)
Q Consensus 77 k~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~e---p~~~~~~l~~~~Nv~~g 133 (180)
++++++++++.......+.+.+.+.. .+.+ .-+++-.+ |......|+.-..++.+
T Consensus 119 ~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~-~hPm~G~e~sG~~~A~~~Lf~g~~~il~ 176 (314)
T 3ggo_A 119 SEDATVTDQGSVKGKLVYDLENILGK-RFVG-GHPIAGTEKSGVEYSLDNLYEGKKVILT 176 (314)
T ss_dssp CTTCEEEECCSCCTHHHHHHHHHHGG-GEEC-EEECCCCCCCSGGGCCTTTTTTCEEEEC
T ss_pred CCCcEEEECCCCcHHHHHHHHHhcCC-CEEe-cCcccCCcccchhhhhhhhhcCCEEEEE
Confidence 99999999876544445667777755 3321 23444322 11123345555555554
No 108
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.13 E-value=0.018 Score=50.38 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=73.7
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc---------cceeeccCHHHHhc---cCCEEEEccCCCCCCcceeCHhHH
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS---------KQVYLILVIRTRSA---QSDFIFVTCALTKDTEQLIGRKQF 73 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~l~~---~~D~v~~h~pl~~~T~glIg~~~i 73 (180)
+|.+|+.. --|..+..||++..... .......+++++.+ .+|+|++++|-...+..++ .+..
T Consensus 12 lG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl-~~l~ 90 (484)
T 4gwg_A 12 LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFI-EKLV 90 (484)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHH-HHHG
T ss_pred hhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHHHHH-HHHH
Confidence 56666651 01346778877754311 01234578999987 4999999999876777777 5666
Q ss_pred hccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecCC
Q psy5266 74 SLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVMI 114 (180)
Q Consensus 74 ~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~ 114 (180)
..|++|.++|+.+.+...+...+.+.+++..+.....+|+-
T Consensus 91 ~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 91 PLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 78999999999999988787888888887777666666653
No 109
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.04 E-value=0.028 Score=46.17 Aligned_cols=89 Identities=12% Similarity=-0.013 Sum_probs=63.4
Q ss_pred eEEEecccccc------CCc-----cceeecc-CHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCC
Q psy5266 22 CVLIRYHVDLT------GGS-----KQVYLIL-VIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG 89 (180)
Q Consensus 22 ~~~~~~~~~~~------~~~-----~~~~~~~-~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~ 89 (180)
..+..||.+.. ... .+. .. ++++++++||+|++++|-......+ .+....++++.++|+++...
T Consensus 49 ~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~ 124 (317)
T 4ezb_A 49 ARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVG 124 (317)
T ss_dssp SEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCC
T ss_pred CeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCC
Confidence 57778887752 000 112 45 8899999999999999976544433 55566789999999999877
Q ss_pred ccCHHHHHHHHhcCCcceEEeecCC
Q psy5266 90 LLDQEALVEFLRDKKIGGAGLDVMI 114 (180)
Q Consensus 90 ~vd~~al~~~L~~~~i~~~~lDv~~ 114 (180)
......+.+.+++..+.....+|+-
T Consensus 125 p~~~~~~~~~l~~~g~~~~d~pv~g 149 (317)
T 4ezb_A 125 PDTKALAAGAIATGKGSFVEGAVMA 149 (317)
T ss_dssp HHHHHHHHHHHHTSSCEEEEEEECS
T ss_pred HHHHHHHHHHHHHcCCeEEeccCCC
Confidence 7778888888887655544445654
No 110
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.82 E-value=0.0075 Score=52.45 Aligned_cols=102 Identities=16% Similarity=0.094 Sum_probs=67.9
Q ss_pred cCCccccc-----eeeeEEEeccccccC---Ccc-----ceeeccCHHHHhcc---CCEEEEccCCCCCCcceeCHhHHh
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTG---GSK-----QVYLILVIRTRSAQ---SDFIFVTCALTKDTEQLIGRKQFS 74 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~---~~~-----~~~~~~~l~~l~~~---~D~v~~h~pl~~~T~glIg~~~i~ 74 (180)
.|.+|+.+ --|..+..|+++... ..+ +.....+++++++. +|+|++++|-...+..++ .+...
T Consensus 13 ~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl-~~l~~ 91 (474)
T 2iz1_A 13 MAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATI-KSLLP 91 (474)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHH-HHHGG
T ss_pred eHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHH-HHHHh
Confidence 56666651 013356677765432 111 34456789999876 999999999766666666 34455
Q ss_pred ccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 75 LMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 75 ~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
.+++|.++|+++.+...+...+.+.+++..+.....+++
T Consensus 92 ~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (474)
T 2iz1_A 92 LLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVS 130 (474)
T ss_dssp GCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEEC
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCC
Confidence 688899999998876666677778777655544444554
No 111
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.73 E-value=0.028 Score=47.81 Aligned_cols=90 Identities=11% Similarity=0.130 Sum_probs=58.9
Q ss_pred cCCcccc-----ceeee-EEEeccccccC---Ccc----ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhc--
Q psy5266 11 TGTPGQV-----HLIVC-VLIRYHVDLTG---GSK----QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSL-- 75 (180)
Q Consensus 11 ~G~iG~~-----~~~~~-~~~~~~~~~~~---~~~----~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~-- 75 (180)
.|.||+. +.+|+ ++..++++... ... ......++.++++.+|+|+.+.| .+..+++...+..
T Consensus 175 aG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~---~~~~~~~~~~l~~~~ 251 (404)
T 1gpj_A 175 AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATA---APHPVIHVDDVREAL 251 (404)
T ss_dssp CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCS---SSSCCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccC---CCCceecHHHHHHHH
Confidence 5666664 23576 78888876532 111 12234678899999999999976 5667788888887
Q ss_pred cC----CCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecCCCCCCCCCCCCCCCCceee
Q psy5266 76 MK----PTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEPLPADHPLVQLDNCGN 132 (180)
Q Consensus 76 mk----~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~l~~~~Nv~~ 132 (180)
|| ++.++++++ +|.+.+.++++++||..
T Consensus 252 lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l 283 (404)
T 1gpj_A 252 RKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEV 283 (404)
T ss_dssp HHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEE
T ss_pred HhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEE
Confidence 43 345555543 35444677888888876
No 112
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=94.72 E-value=0.011 Score=51.95 Aligned_cols=83 Identities=18% Similarity=0.187 Sum_probs=58.7
Q ss_pred cCCcccc-----ceeeeEEEeccccccCC---ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTGG---SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
.|.||+. ..+|+++..+|++.... ........+++++++.+|+++.+ ..+.++|+.+.+.+||+++++
T Consensus 273 aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~a----tG~~~vl~~e~l~~mk~gaiV 348 (488)
T 3ond_A 273 YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTT----TGNKDIIMLDHMKKMKNNAIV 348 (488)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEEC----SSCSCSBCHHHHTTSCTTEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeC----CCChhhhhHHHHHhcCCCeEE
Confidence 3566664 23677888877764321 11123567899999999999864 357889999999999999999
Q ss_pred EecCCCC-ccCHHHHH
Q psy5266 83 INTSRGG-LLDQEALV 97 (180)
Q Consensus 83 vn~~Rg~-~vd~~al~ 97 (180)
+|++++. -++...+.
T Consensus 349 vNaG~~~~Ei~~~~l~ 364 (488)
T 3ond_A 349 CNIGHFDNEIDMLGLE 364 (488)
T ss_dssp EESSSTTTTBTHHHHH
T ss_pred EEcCCCCcccchHHHH
Confidence 9999973 24444444
No 113
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.29 E-value=0.0067 Score=48.43 Aligned_cols=92 Identities=14% Similarity=0.174 Sum_probs=59.6
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
.|.+|+.+ - |..+..|+++..... .+..... ++++++++|+|++++|-...+..++ .+....++++.+
T Consensus 9 ~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~l~~~~~ 85 (289)
T 2cvz_A 9 LGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYPYLREGTY 85 (289)
T ss_dssp CSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTTTCCTTEE
T ss_pred ccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHhhCCCCCE
Confidence 57777761 1 345556665433210 0112223 7788899999999999665455555 344456888999
Q ss_pred EEecCCCCccCHHHHHHHHhcCCc
Q psy5266 82 LINTSRGGLLDQEALVEFLRDKKI 105 (180)
Q Consensus 82 lvn~~Rg~~vd~~al~~~L~~~~i 105 (180)
+++++.+...+.+.+.+.+++..+
T Consensus 86 vv~~s~~~~~~~~~l~~~~~~~g~ 109 (289)
T 2cvz_A 86 WVDATSGEPEASRRLAERLREKGV 109 (289)
T ss_dssp EEECSCCCHHHHHHHHHHHHTTTE
T ss_pred EEECCCCCHHHHHHHHHHHHHcCC
Confidence 999988776677788888876543
No 114
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.24 E-value=0.012 Score=51.53 Aligned_cols=102 Identities=17% Similarity=0.112 Sum_probs=68.7
Q ss_pred cCCccccc---e--eeeEEEeccccccCC---c------cceeeccCHHHHhcc---CCEEEEccCCCCCCcceeCHhHH
Q psy5266 11 TGTPGQVH---L--IVCVLIRYHVDLTGG---S------KQVYLILVIRTRSAQ---SDFIFVTCALTKDTEQLIGRKQF 73 (180)
Q Consensus 11 ~G~iG~~~---~--~~~~~~~~~~~~~~~---~------~~~~~~~~l~~l~~~---~D~v~~h~pl~~~T~glIg~~~i 73 (180)
+|.+|+.. + -|..+..|+++.... . .+.....+++++++. +|+|++++|-...+..++ .+..
T Consensus 18 lG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl-~~l~ 96 (497)
T 2p4q_A 18 LAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALI-NQIV 96 (497)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHH-HHHG
T ss_pred eHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHH-HHHH
Confidence 56666641 0 133566777654321 1 134456789999887 999999999766677777 4555
Q ss_pred hccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 74 SLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 74 ~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
..+++|.++|+++.+...+...+.+.+++..+.....+|+
T Consensus 97 ~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVs 136 (497)
T 2p4q_A 97 PLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVS 136 (497)
T ss_dssp GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcc
Confidence 6788999999998877666677888887755544444544
No 115
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.04 E-value=0.0085 Score=48.13 Aligned_cols=92 Identities=14% Similarity=0.064 Sum_probs=58.4
Q ss_pred cCCccccc-----eeeeEEEeccccccCC----ccceeeccCHHHHhccCCEEEEccCCCCCCcceeCH--hHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGG----SKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGR--KQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~--~~i~~mk~g 79 (180)
.|.+|+.+ -.|..+..|+++.... ..+.....+++++++++|+|++++|-...+..++.. ..+..++++
T Consensus 8 ~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~~~l~~~ 87 (296)
T 2gf2_A 8 LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKG 87 (296)
T ss_dssp CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCTT
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHHhcCCCC
Confidence 57777752 0134566776654321 112334568999999999999999866555555432 234467889
Q ss_pred cEEEecCCCCccCHHHHHHHHhc
Q psy5266 80 AILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
.++|+.+....-+...+.+.+.+
T Consensus 88 ~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 88 SLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp CEEEECSCCCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHHHH
Confidence 99999766555445556666654
No 116
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.80 E-value=0.016 Score=50.40 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=55.0
Q ss_pred eeeccCHHHHhcc---CCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 38 VYLILVIRTRSAQ---SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 38 ~~~~~~l~~l~~~---~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
.....+++++++. +|+|++++|-...+..++ .+....+++|.++|+.+.+...+...+.+.+++..+.....+++
T Consensus 53 i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (478)
T 1pgj_A 53 LKAFETMEAFAASLKKPRKALILVQAGAATDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGIS 130 (478)
T ss_dssp EEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred eEEECCHHHHHhcccCCCEEEEecCChHHHHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeecc
Confidence 4456789998874 999999999765666666 34455688899999998877666677888887755544444554
No 117
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.58 E-value=0.012 Score=47.91 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=38.9
Q ss_pred cCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHH
Q psy5266 42 LVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEF 99 (180)
Q Consensus 42 ~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~ 99 (180)
.++++.+++||+|++++|... +..++. +....+++++++++++.......+.+.+.
T Consensus 57 ~~~~~~~~~aDvVilavp~~~-~~~vl~-~l~~~l~~~~iv~~~~svk~~~~~~~~~~ 112 (298)
T 2pv7_A 57 AVAESILANADVVIVSVPINL-TLETIE-RLKPYLTENMLLADLTSVKREPLAKMLEV 112 (298)
T ss_dssp GGHHHHHTTCSEEEECSCGGG-HHHHHH-HHGGGCCTTSEEEECCSCCHHHHHHHHHH
T ss_pred cCHHHHhcCCCEEEEeCCHHH-HHHHHH-HHHhhcCCCcEEEECCCCCcHHHHHHHHh
Confidence 368889999999999999654 666663 33445888999999876543333444443
No 118
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.75 E-value=0.24 Score=39.27 Aligned_cols=79 Identities=11% Similarity=0.093 Sum_probs=53.2
Q ss_pred EEEeccccccCCc----cce--eeccCHHHHhc-cCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHH
Q psy5266 23 VLIRYHVDLTGGS----KQV--YLILVIRTRSA-QSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEA 95 (180)
Q Consensus 23 ~~~~~~~~~~~~~----~~~--~~~~~l~~l~~-~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~a 95 (180)
.+..||++..... .+. ....++++.++ +||+|++++|.. .+..++. +....++++.++++++.......+.
T Consensus 28 ~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~-~l~~~l~~~~iv~~~~~~~~~~~~~ 105 (281)
T 2g5c_A 28 KIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK-KLSYILSEDATVTDQGSVKGKLVYD 105 (281)
T ss_dssp EEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH-HHHHHSCTTCEEEECCSCCTHHHHH
T ss_pred EEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH-HHHhhCCCCcEEEECCCCcHHHHHH
Confidence 6777776543210 011 12457888999 999999999965 4445553 3445688999999988776555677
Q ss_pred HHHHHhcC
Q psy5266 96 LVEFLRDK 103 (180)
Q Consensus 96 l~~~L~~~ 103 (180)
+.+.+.++
T Consensus 106 l~~~l~~~ 113 (281)
T 2g5c_A 106 LENILGKR 113 (281)
T ss_dssp HHHHHGGG
T ss_pred HHHhcccc
Confidence 88888764
No 119
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.53 E-value=0.062 Score=43.53 Aligned_cols=97 Identities=10% Similarity=0.018 Sum_probs=61.9
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCH--hHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGR--KQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~--~~i~~mk~g 79 (180)
.|.+|+.+ -.|..+..|+++..... .+.....++++.++++|+|++++|....+..++.. +.+..++++
T Consensus 38 ~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~ 117 (316)
T 2uyy_A 38 LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPG 117 (316)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTT
T ss_pred ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCC
Confidence 56677651 01345667776543211 12234568999999999999999965444444432 234568889
Q ss_pred cEEEecCCCCccCHHHHHHHHhcCCcce
Q psy5266 80 AILINTSRGGLLDQEALVEFLRDKKIGG 107 (180)
Q Consensus 80 ~~lvn~~Rg~~vd~~al~~~L~~~~i~~ 107 (180)
..+|+++.+.....+.+.+.+.+..+..
T Consensus 118 ~~vv~~s~~~~~~~~~l~~~~~~~~~~~ 145 (316)
T 2uyy_A 118 KCYVDMSTVDADTVTELAQVIVSRGGRF 145 (316)
T ss_dssp CEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 9999998766555677778776544433
No 120
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.34 E-value=0.15 Score=44.02 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=46.0
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCccee-----------C--HhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCC
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLI-----------G--RKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKK 104 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glI-----------g--~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~ 104 (180)
...++++.++.||+|++++|-.....+.+ . ......|+++.++|+.+....-..+.+.+.+++..
T Consensus 72 ~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~ 149 (467)
T 2q3e_A 72 FSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANT 149 (467)
T ss_dssp EESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTC
T ss_pred EECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhC
Confidence 34678889999999999998544333321 1 12334589999999998776666777888887753
No 121
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.58 E-value=0.014 Score=48.50 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=45.6
Q ss_pred cCCccccc-----eeeeEEEeccccccC-C--c--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCc
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTG-G--S--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTA 80 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~-~--~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~ 80 (180)
.|.||+.+ -.|..+..|+++... . . .+. ...++++.+++||+|++++|... ...++..+....|++++
T Consensus 24 ~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~-~~~~~~e~~~~aDvVilavp~~~-~~~v~~~~i~~~l~~~~ 101 (338)
T 1np3_A 24 YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGL-KVADVKTAVAAADVVMILTPDEF-QGRLYKEEIEPNLKKGA 101 (338)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTC-EEECHHHHHHTCSEEEECSCHHH-HHHHHHHHTGGGCCTTC
T ss_pred chHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCC-EEccHHHHHhcCCEEEEeCCcHH-HHHHHHHHHHhhCCCCC
Confidence 67777762 123455666665432 0 0 112 22388999999999999999653 24555434445688999
Q ss_pred EEEec
Q psy5266 81 ILINT 85 (180)
Q Consensus 81 ~lvn~ 85 (180)
+++.+
T Consensus 102 ivi~~ 106 (338)
T 1np3_A 102 TLAFA 106 (338)
T ss_dssp EEEES
T ss_pred EEEEc
Confidence 99865
No 122
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.20 E-value=0.76 Score=36.65 Aligned_cols=72 Identities=15% Similarity=0.060 Sum_probs=50.1
Q ss_pred eeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 39 YLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
....++++.+++||+|+.++|-+.+....+-.+....+++++++++...+ +...++.+.+.... ..+++..+
T Consensus 74 ~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~~-~~ig~h~~ 145 (283)
T 4e12_A 74 RYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRGD-KFLALHFA 145 (283)
T ss_dssp EEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCGG-GEEEEEEC
T ss_pred EEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCCc-ceEEEccC
Confidence 34578999999999999999977555555555666679999999844333 35677777775433 44555555
No 123
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.75 E-value=0.14 Score=43.05 Aligned_cols=88 Identities=10% Similarity=0.098 Sum_probs=60.5
Q ss_pred cCCcccc-----ceeeeEEEeccccccC---Cccc-eeeccCHHHHhc-cCCEEEEccCCCCCCcceeCHhHHhccCCCc
Q psy5266 11 TGTPGQV-----HLIVCVLIRYHVDLTG---GSKQ-VYLILVIRTRSA-QSDFIFVTCALTKDTEQLIGRKQFSLMKPTA 80 (180)
Q Consensus 11 ~G~iG~~-----~~~~~~~~~~~~~~~~---~~~~-~~~~~~l~~l~~-~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~ 80 (180)
.|++|+. +-+|++++.+|.+... +.+. -....+.++++. +||+++.+ .+.++|+.+.+++|+ ..
T Consensus 181 ~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~-----a~~~~I~~~~~~~lg-~~ 254 (364)
T 1leh_A 181 LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPC-----ALGAVLNDFTIPQLK-AK 254 (364)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEEC-----SCSCCBSTTHHHHCC-CS
T ss_pred chHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeecc-----chHHHhCHHHHHhCC-Cc
Confidence 4666664 3467888888877542 1111 123456778777 99999876 477899999999985 45
Q ss_pred EEEecCCCCccCHHHHHHHHhcCCc
Q psy5266 81 ILINTSRGGLLDQEALVEFLRDKKI 105 (180)
Q Consensus 81 ~lvn~~Rg~~vd~~al~~~L~~~~i 105 (180)
++++.+++.+.++++ .+.|++..+
T Consensus 255 iV~e~An~p~t~~ea-~~~L~~~Gi 278 (364)
T 1leh_A 255 VIAGSADNQLKDPRH-GKYLHELGI 278 (364)
T ss_dssp EECCSCSCCBSSHHH-HHHHHHHTC
T ss_pred EEEeCCCCCcccHHH-HHHHHhCCC
Confidence 888999998887664 455665555
No 124
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.57 E-value=0.41 Score=41.48 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=67.1
Q ss_pred cCCccccc-----eeeeEEEeccccccC---Cc------cceeeccCHHHHhc---cCCEEEEccCCCCCCcceeCHhHH
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTG---GS------KQVYLILVIRTRSA---QSDFIFVTCALTKDTEQLIGRKQF 73 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~---~~------~~~~~~~~l~~l~~---~~D~v~~h~pl~~~T~glIg~~~i 73 (180)
.|.+|+.+ --|..+..|+++... .. .+.....+++++++ .+|+|++++|-...+..++. +..
T Consensus 10 ~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~-~l~ 88 (482)
T 2pgd_A 10 LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIE-KLV 88 (482)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHH-HHH
T ss_pred hHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHHH-HHH
Confidence 46666651 013356677765432 11 22345678999874 89999999997656666663 445
Q ss_pred hccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 74 SLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 74 ~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
..+++|.++|+.+.+...+...+.+.+++..+.....+++
T Consensus 89 ~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 128 (482)
T 2pgd_A 89 PLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVS 128 (482)
T ss_dssp HHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCC
Confidence 5688899999988877666667777787655544445554
No 125
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.50 E-value=2.1 Score=30.13 Aligned_cols=85 Identities=11% Similarity=0.135 Sum_probs=53.5
Q ss_pred cCCccccc-----eeeeEEEeccccccCC---cc----ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGG---SK----QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKP 78 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~---~~----~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~ 78 (180)
+|.+|+.+ -.|..+..++++.... .+ ......++++.++++|+|+.+.|.. ..++.. ..+++
T Consensus 29 ~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~---~~l~~ 102 (144)
T 3oj0_A 29 NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE---RSLMP 102 (144)
T ss_dssp CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG---GGCCT
T ss_pred CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH---HHcCC
Confidence 56677652 1234456666554321 11 1235678999999999999998855 345554 45778
Q ss_pred CcEEEecCCCC-------ccCHHHHHHHHh
Q psy5266 79 TAILINTSRGG-------LLDQEALVEFLR 101 (180)
Q Consensus 79 g~~lvn~~Rg~-------~vd~~al~~~L~ 101 (180)
|..+++.+... +++.+++.+.++
T Consensus 103 g~~vid~~~p~~~~~~~~~~~~d~l~~~~~ 132 (144)
T 3oj0_A 103 GKLFIDLGNPPNIERGNNVITLDEIYEISK 132 (144)
T ss_dssp TCEEEECCSSCSBCCSTTSEEHHHHHHHHH
T ss_pred CCEEEEccCCccCCCCCEEEeHHHHHHHHH
Confidence 99999887642 345666666554
No 126
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=86.68 E-value=1.7 Score=37.33 Aligned_cols=64 Identities=6% Similarity=0.135 Sum_probs=40.6
Q ss_pred eeccCHHHHhccCCEEEEccCCCCCC-cceeC--------HhHHhccCCCcEEEecCCCCccCHHHHHHHHhc
Q psy5266 39 YLILVIRTRSAQSDFIFVTCALTKDT-EQLIG--------RKQFSLMKPTAILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~pl~~~T-~glIg--------~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
....++++.++.||+|++++|-.... .|-.| .+....|++|.++|+.+--..-..+.+.+.+++
T Consensus 73 ~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 73 SFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 34568999999999999998844321 22222 233446899999999873222234455555544
No 127
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.92 E-value=0.93 Score=35.91 Aligned_cols=90 Identities=17% Similarity=0.168 Sum_probs=56.9
Q ss_pred cCCccccc-------eeeeEEEeccccccCCc----cce--eeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhc-c
Q psy5266 11 TGTPGQVH-------LIVCVLIRYHVDLTGGS----KQV--YLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSL-M 76 (180)
Q Consensus 11 ~G~iG~~~-------~~~~~~~~~~~~~~~~~----~~~--~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~-m 76 (180)
.|.+|+.+ +.+..+..||++..... .+. ....++++.+++||+|++++|-.. ...++. +.... +
T Consensus 14 ~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~~-~l~~~~l 91 (290)
T 3b1f_A 14 LGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFIK-ILADLDL 91 (290)
T ss_dssp CSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHHH-HHHTSCC
T ss_pred eCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHHH-HHHhcCC
Confidence 56666651 22456777776543211 111 234578888999999999999543 244442 23345 7
Q ss_pred CCCcEEEecCCCCccCHHHHHHHHhc
Q psy5266 77 KPTAILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 77 k~g~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
+++.++++++.......+.+.+.+.+
T Consensus 92 ~~~~ivi~~~~~~~~~~~~l~~~l~~ 117 (290)
T 3b1f_A 92 KEDVIITDAGSTKYEIVRAAEYYLKD 117 (290)
T ss_dssp CTTCEEECCCSCHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCchHHHHHHHHhccc
Confidence 88999998877655455778888775
No 128
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.59 E-value=0.33 Score=40.72 Aligned_cols=102 Identities=12% Similarity=0.107 Sum_probs=57.2
Q ss_pred CCCCCcceeCHhHHhc-----cCC-CcEEEecCCCC------------cc-----CHHHHHHHHhcCCcceEEeecCCCC
Q psy5266 60 LTKDTEQLIGRKQFSL-----MKP-TAILINTSRGG------------LL-----DQEALVEFLRDKKIGGAGLDVMIPE 116 (180)
Q Consensus 60 l~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~------------~v-----d~~al~~~L~~~~i~~~~lDv~~~e 116 (180)
+.++|.++||.+.+++ ++. |+.++-+.|.. -+ +.+++.+.++..|++..+.. .
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~----~ 241 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL----V 241 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC----C
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC----c
Confidence 5678999999998886 444 66665554421 01 35678888888898433221 1
Q ss_pred CCCCCCCCCCCCceeecccCHHHHHHHHHc-ccccccccc---CCCC-CCCCCCCCcccCCcEEE
Q psy5266 117 PLPADHPLVQLDNCGNGLLDQEALVEFLRD-KKIGGAGLD---VMIP-EPMPADHPLVQLDNCEI 176 (180)
Q Consensus 117 p~~~~~~l~~~~Nv~~g~~~~~al~~~L~~-g~l~ga~ld---V~~~-Eplp~~~pl~~~~nv~i 176 (180)
|...+..++ +.+.+ +.++. +.+...+.| |++. ||++.++|+|.++||.+
T Consensus 242 p~~~t~~li----------~~~~l-~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i 295 (377)
T 2vhw_A 242 PGAKAPKLV----------SNSLV-AHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLF 295 (377)
T ss_dssp TTSCCCCCB----------CHHHH-TTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEE
T ss_pred CCCCCccee----------cHHHH-hcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEE
Confidence 211111121 22221 22221 222222211 5555 88888999999999985
No 129
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=85.06 E-value=0.91 Score=38.34 Aligned_cols=97 Identities=14% Similarity=0.281 Sum_probs=55.2
Q ss_pred CCCCCcceeCHhHHhc-----cCC-Cc-EEEecCCCC-------------ccCHHHHHHHHhcCCcceEEeecCCCCCCC
Q psy5266 60 LTKDTEQLIGRKQFSL-----MKP-TA-ILINTSRGG-------------LLDQEALVEFLRDKKIGGAGLDVMIPEPLP 119 (180)
Q Consensus 60 l~~~T~glIg~~~i~~-----mk~-g~-~lvn~~Rg~-------------~vd~~al~~~L~~~~i~~~~lDv~~~ep~~ 119 (180)
+.+++.++||.+.+++ ++. |+ .++-++|.. .++.+++.+.+...|+ |+...|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDv------Vi~at~~- 237 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDV------VVSATAA- 237 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSE------EEECCSS-
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCE------EEEccCC-
Confidence 5678999999988876 444 65 565555532 1223345566666666 3322221
Q ss_pred CCCCCCCCCceeecccCHHHHHH-HHHccccc-cccccCCCCCCCCCCCCcccCCcEEE
Q psy5266 120 ADHPLVQLDNCGNGLLDQEALVE-FLRDKKIG-GAGLDVMIPEPMPADHPLVQLDNCEI 176 (180)
Q Consensus 120 ~~~~l~~~~Nv~~g~~~~~al~~-~L~~g~l~-ga~ldV~~~Eplp~~~pl~~~~nv~i 176 (180)
+.+ ..+.+.+.. .++..+-+ -..+|+.. |.+.+.+++++|||++
T Consensus 238 -~~~----------~~~~~~l~~~~lk~r~~~~~v~vdia~--P~~i~~~l~~l~~v~l 283 (404)
T 1gpj_A 238 -PHP----------VIHVDDVREALRKRDRRSPILIIDIAN--PRDVEEGVENIEDVEV 283 (404)
T ss_dssp -SSC----------CBCHHHHHHHHHHCSSCCCEEEEECCS--SCSBCTTGGGSTTEEE
T ss_pred -CCc----------eecHHHHHHHHHhccCCCCEEEEEccC--CCCCCccccccCCeEE
Confidence 111 234455544 35421111 23577754 6566789999999987
No 130
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.88 E-value=0.041 Score=42.34 Aligned_cols=41 Identities=7% Similarity=0.113 Sum_probs=29.7
Q ss_pred HhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCc
Q psy5266 47 RSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL 90 (180)
Q Consensus 47 l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~ 90 (180)
.+++||+|++++| ...+..++. +....++ +.++++++.|--
T Consensus 54 ~~~~aD~vi~av~-~~~~~~v~~-~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 54 ATTLGEIVIMAVP-YPALAALAK-QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp CSSCCSEEEECSC-HHHHHHHHH-HTHHHHT-TSEEEECCCCBC
T ss_pred HhccCCEEEEcCC-cHHHHHHHH-HHHHhcC-CCEEEEECCCCC
Confidence 5789999999999 555555554 2233577 899999988643
No 131
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=84.75 E-value=0.079 Score=46.49 Aligned_cols=105 Identities=14% Similarity=0.090 Sum_probs=62.8
Q ss_pred CCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc---------CHHHHHHHHhcCCcceEEeecCCCCCCCCCCC
Q psy5266 59 ALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL---------DQEALVEFLRDKKIGGAGLDVMIPEPLPADHP 123 (180)
Q Consensus 59 pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v---------d~~al~~~L~~~~i~~~~lDv~~~ep~~~~~~ 123 (180)
.+.++|.+++|.+.+++ +|. |+.++-+.|...- +..++.++++.+|++..+ .+ +..
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~a------tg---t~~ 341 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTA------TG---NKD 341 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEEC------SS---SSC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEEC------CC---CHH
Confidence 45688999999998886 554 7777766654210 111245667888884333 22 122
Q ss_pred CCC------C-C-----ceeec-c-cCHHHHHH-HHHccccccccccCCCCCCCCCCCC--cccCCcEE
Q psy5266 124 LVQ------L-D-----NCGNG-L-LDQEALVE-FLRDKKIGGAGLDVMIPEPMPADHP--LVQLDNCE 175 (180)
Q Consensus 124 l~~------~-~-----Nv~~g-~-~~~~al~~-~L~~g~l~ga~ldV~~~Eplp~~~p--l~~~~nv~ 175 (180)
+++ + + |+.++ . ++.+++.+ +++++.+. ..+|++..++. .++ ++..++++
T Consensus 342 ~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~--~~~l~LL~~grlv 407 (494)
T 3ce6_A 342 IIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT--GRSIIVLSEGRLL 407 (494)
T ss_dssp SBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT--CCEEEEEGGGSCH
T ss_pred HHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc--chHHHHHhCCCEE
Confidence 332 1 1 55554 3 78888888 78888887 56788654221 344 44455664
No 132
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=84.75 E-value=0.028 Score=46.98 Aligned_cols=118 Identities=8% Similarity=-0.005 Sum_probs=64.9
Q ss_pred cCCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhcc----CCEEEEccCCCCCCcceeCHhHHhccC
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQ----SDFIFVTCALTKDTEQLIGRKQFSLMK 77 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~----~D~v~~h~pl~~~T~glIg~~~i~~mk 77 (180)
+|.||+.. -.|..+..||++..... .+.....++++++++ ||+|++++|. ..+..++ ..+..++
T Consensus 16 ~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl--~~l~~~~ 92 (341)
T 3ktd_A 16 LGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL--DAVHTHA 92 (341)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH--HHHHHHC
T ss_pred ecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH--HHHHccC
Confidence 67777761 12456777776653211 112235688888875 6999999995 3566666 3455568
Q ss_pred CCcEEEecCCCCccCHHHHHHHHhcCCcceEE-eecCCCC---CCCCCCCCCCCCceeec
Q psy5266 78 PTAILINTSRGGLLDQEALVEFLRDKKIGGAG-LDVMIPE---PLPADHPLVQLDNCGNG 133 (180)
Q Consensus 78 ~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~-lDv~~~e---p~~~~~~l~~~~Nv~~g 133 (180)
+++++++++--.....+.+.+.+. .+.++. -+++-.| |...+..|+.-.+++++
T Consensus 93 ~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~ilt 150 (341)
T 3ktd_A 93 PNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVT 150 (341)
T ss_dssp TTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEEC
T ss_pred CCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEE
Confidence 899999886543222334444432 222222 2444322 11123455555566664
No 133
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=83.62 E-value=0.46 Score=37.16 Aligned_cols=58 Identities=3% Similarity=-0.047 Sum_probs=42.1
Q ss_pred cCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcC
Q psy5266 42 LVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDK 103 (180)
Q Consensus 42 ~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~ 103 (180)
.++++++++||+|++++|-......+ .+....+++ ++++++.....+.+.+.+.+.+.
T Consensus 48 ~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 48 ETSEEDVYSCPVVISAVTPGVALGAA--RRAGRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp ECCHHHHHTSSEEEECSCGGGHHHHH--HHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred CCHHHHHhcCCEEEEECCCHHHHHHH--HHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 67888999999999999976444433 345556776 88998766655566787777653
No 134
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=83.55 E-value=3.2 Score=32.45 Aligned_cols=59 Identities=5% Similarity=0.065 Sum_probs=41.3
Q ss_pred ccCHHHHhccCCEEEEccCCC--CCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCc
Q psy5266 41 ILVIRTRSAQSDFIFVTCALT--KDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKI 105 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~--~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i 105 (180)
..+++++ +++|+|++++|.. +.+...+. ...+++|.++++++.+.. +. .+.+.+++..+
T Consensus 163 ~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~~g~ 223 (263)
T 2d5c_A 163 AVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKAKGL 223 (263)
T ss_dssp ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHHTTC
T ss_pred hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHHCcC
Confidence 4578888 9999999999976 33334554 456888999999887643 22 46666665443
No 135
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.53 E-value=0.042 Score=44.06 Aligned_cols=75 Identities=11% Similarity=0.073 Sum_probs=46.2
Q ss_pred CCccccc-----eeeeEEEeccccccCCc----cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEE
Q psy5266 12 GTPGQVH-----LIVCVLIRYHVDLTGGS----KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL 82 (180)
Q Consensus 12 G~iG~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~l 82 (180)
|.+|+.. --|..+..|+++..... .+ ....++.+.+++||+|++++|-.. +..++ .+....++++.++
T Consensus 21 G~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-~~~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~~~l~~~~iv 97 (286)
T 3c24_A 21 GKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG-IPLTDGDGWIDEADVVVLALPDNI-IEKVA-EDIVPRVRPGTIV 97 (286)
T ss_dssp SHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT-CCCCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHGGGSCTTCEE
T ss_pred CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC-CCcCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHHHhCCCCCEE
Confidence 7777751 11345667766543210 01 122367788999999999999543 44444 2333457889999
Q ss_pred EecCCCC
Q psy5266 83 INTSRGG 89 (180)
Q Consensus 83 vn~~Rg~ 89 (180)
++++.+.
T Consensus 98 v~~s~~~ 104 (286)
T 3c24_A 98 LILDAAA 104 (286)
T ss_dssp EESCSHH
T ss_pred EECCCCc
Confidence 9987764
No 136
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.35 E-value=0.11 Score=40.97 Aligned_cols=79 Identities=8% Similarity=0.029 Sum_probs=48.2
Q ss_pred cCCccccc-----eeeeE-EEeccccccCC---cc--ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCC
Q psy5266 11 TGTPGQVH-----LIVCV-LIRYHVDLTGG---SK--QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPT 79 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~-~~~~~~~~~~~---~~--~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g 79 (180)
.|++|+.+ -.|.. +..|+++.... .+ +.....+++++++++|+|++++|-. ....++ .+....++++
T Consensus 18 ~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v~-~~l~~~~~~~ 95 (266)
T 3d1l_A 18 AGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAELL-QGIVEGKREE 95 (266)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHHH-HHHHTTCCTT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHHH-HHHHhhcCCC
Confidence 56667652 01233 55666553321 01 2234568889999999999999955 223344 2333457789
Q ss_pred cEEEecCCCCcc
Q psy5266 80 AILINTSRGGLL 91 (180)
Q Consensus 80 ~~lvn~~Rg~~v 91 (180)
.++++++.+.-.
T Consensus 96 ~ivv~~s~~~~~ 107 (266)
T 3d1l_A 96 ALMVHTAGSIPM 107 (266)
T ss_dssp CEEEECCTTSCG
T ss_pred cEEEECCCCCch
Confidence 999999887543
No 137
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=80.21 E-value=2.8 Score=33.92 Aligned_cols=72 Identities=17% Similarity=0.157 Sum_probs=48.0
Q ss_pred cCCccccce------eee-EEEeccccccC---Ccc--c--eeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhcc
Q psy5266 11 TGTPGQVHL------IVC-VLIRYHVDLTG---GSK--Q--VYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLM 76 (180)
Q Consensus 11 ~G~iG~~~~------~~~-~~~~~~~~~~~---~~~--~--~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~m 76 (180)
+|.+|+.|. ++. .+..|+++... ..+ + .....++++++++||+|++++|- +..++.. ..+
T Consensus 143 ~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v~~~---~~l 216 (312)
T 2i99_A 143 AGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPILFG---EWV 216 (312)
T ss_dssp CSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCCBCG---GGS
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcccCH---HHc
Confidence 566666531 233 67777776542 111 1 33467899999999999999994 4556654 568
Q ss_pred CCCcEEEecCCC
Q psy5266 77 KPTAILINTSRG 88 (180)
Q Consensus 77 k~g~~lvn~~Rg 88 (180)
++|.++++++..
T Consensus 217 ~~g~~vi~~g~~ 228 (312)
T 2i99_A 217 KPGAHINAVGAS 228 (312)
T ss_dssp CTTCEEEECCCC
T ss_pred CCCcEEEeCCCC
Confidence 899999988544
No 138
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=80.04 E-value=1.8 Score=36.83 Aligned_cols=62 Identities=11% Similarity=0.186 Sum_probs=47.4
Q ss_pred ceeee---EEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhcc-CCCcEEEecC
Q psy5266 18 HLIVC---VLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLM-KPTAILINTS 86 (180)
Q Consensus 18 ~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~m-k~g~~lvn~~ 86 (180)
..+|+ .+..+|.+..... . + ++ .++++|+|+.++....+.--+|.++.+++| |+|+++|.++
T Consensus 235 ~~lGa~~~~V~v~D~~~~~~g-~--~---~~-~i~~aDivIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 235 HKVGIPDANILKWDIKETSRG-G--P---FD-EIPQADIFINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHTTCCGGGEEEECHHHHTTC-S--C---CT-HHHHSSEEEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred HhCCCCcCceEEeeccccccC-C--c---hh-hHhhCCEEEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 35676 7888888762211 1 1 13 356999999999997778899999999999 9999999875
No 139
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=76.26 E-value=5 Score=33.97 Aligned_cols=64 Identities=8% Similarity=-0.001 Sum_probs=43.7
Q ss_pred eeccCHHHHhccCCEEEEccCCCCCCcceeCHhH--------HhccCC---CcEEEecCCCCccC-HHHHHHHHhc
Q psy5266 39 YLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQ--------FSLMKP---TAILINTSRGGLLD-QEALVEFLRD 102 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~--------i~~mk~---g~~lvn~~Rg~~vd-~~al~~~L~~ 102 (180)
....++++.++.||+|++++|-.....|..|... ...|++ +.++|+.+....-. .+.+.+.+++
T Consensus 65 ~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 65 SGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 3456788889999999999996655445444322 234788 89999887544434 5567777765
No 140
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=75.54 E-value=1.7 Score=33.04 Aligned_cols=44 Identities=18% Similarity=0.165 Sum_probs=33.6
Q ss_pred CHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCc
Q psy5266 43 VIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL 90 (180)
Q Consensus 43 ~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~ 90 (180)
++++.++++|+|++++|- .....++. +..+.++.++++++.+.-
T Consensus 76 ~~~~~~~~~DvVi~av~~-~~~~~v~~---l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 76 FQEEAVSSPEVIFVAVFR-EHYSSLCS---LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp EHHHHTTSCSEEEECSCG-GGSGGGGG---GHHHHTTCEEEECCCCCH
T ss_pred cHHHHHhCCCEEEECCCh-HHHHHHHH---HHHhcCCCEEEEeCCCcc
Confidence 888999999999999994 34555553 443337899999988864
No 141
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=72.50 E-value=6.6 Score=30.98 Aligned_cols=64 Identities=6% Similarity=0.111 Sum_probs=41.9
Q ss_pred eeEEEeccccccC---Ccc--ceeeccCHHHHhccCCEEEEccCCCC--CCcceeCHhHHhccCCCcEEEecCC
Q psy5266 21 VCVLIRYHVDLTG---GSK--QVYLILVIRTRSAQSDFIFVTCALTK--DTEQLIGRKQFSLMKPTAILINTSR 87 (180)
Q Consensus 21 ~~~~~~~~~~~~~---~~~--~~~~~~~l~~l~~~~D~v~~h~pl~~--~T~glIg~~~i~~mk~g~~lvn~~R 87 (180)
|..+..++++... ..+ +.....+++++++++|+|++++|... .....++ +..++++.+++.++.
T Consensus 152 g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 152 GAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp TCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred CCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 3466777766431 111 12223378899999999999999763 2333454 456888999999877
No 142
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=72.31 E-value=3.8 Score=33.31 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=31.7
Q ss_pred cCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCC
Q psy5266 42 LVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSR 87 (180)
Q Consensus 42 ~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~R 87 (180)
.+|++.+++||+|+..++. -++|..+. +|+|+++|+++.
T Consensus 196 ~~L~~~~~~ADIVI~Avg~----p~~I~~~~---vk~GavVIDvgi 234 (286)
T 4a5o_A 196 RDLADHVSRADLVVVAAGK----PGLVKGEW---IKEGAIVIDVGI 234 (286)
T ss_dssp SCHHHHHHTCSEEEECCCC----TTCBCGGG---SCTTCEEEECCS
T ss_pred cCHHHHhccCCEEEECCCC----CCCCCHHH---cCCCeEEEEecc
Confidence 4899999999999999973 34676655 499999998864
No 143
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=71.76 E-value=4.3 Score=32.95 Aligned_cols=41 Identities=15% Similarity=0.314 Sum_probs=32.5
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRG 88 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg 88 (180)
..+|++.+++||+|+..++- -++|..+. +|+|+++|+++..
T Consensus 195 t~~L~~~~~~ADIVI~Avg~----p~~I~~~~---vk~GavVIDvgi~ 235 (285)
T 3l07_A 195 TTDLKSHTTKADILIVAVGK----PNFITADM---VKEGAVVIDVGIN 235 (285)
T ss_dssp CSSHHHHHTTCSEEEECCCC----TTCBCGGG---SCTTCEEEECCCE
T ss_pred chhHHHhcccCCEEEECCCC----CCCCCHHH---cCCCcEEEEeccc
Confidence 45899999999999999983 34576654 5899999988643
No 144
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=71.67 E-value=1.6 Score=34.32 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=37.8
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHH
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFL 100 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L 100 (180)
..+++++ +++|+|++++|-. .+..++. +....++++.++++++.......+.+.+.+
T Consensus 49 ~~~~~~~-~~~D~vi~av~~~-~~~~~~~-~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~ 105 (279)
T 2f1k_A 49 GQDLSLL-QTAKIIFLCTPIQ-LILPTLE-KLIPHLSPTAIVTDVASVKTAIAEPASQLW 105 (279)
T ss_dssp ESCGGGG-TTCSEEEECSCHH-HHHHHHH-HHGGGSCTTCEEEECCSCCHHHHHHHHHHS
T ss_pred cCCHHHh-CCCCEEEEECCHH-HHHHHHH-HHHhhCCCCCEEEECCCCcHHHHHHHHHHh
Confidence 4578888 9999999999943 4444442 334458889999998654443344444443
No 145
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=71.67 E-value=3.7 Score=33.22 Aligned_cols=41 Identities=15% Similarity=0.285 Sum_probs=33.0
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRG 88 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg 88 (180)
..+|++.+++||+|+..++. -++|..+. +|+|+++|+++..
T Consensus 184 t~~L~~~~~~ADIVI~Avg~----p~~I~~~~---vk~GavVIDvgi~ 224 (276)
T 3ngx_A 184 TKDIGSMTRSSKIVVVAVGR----PGFLNREM---VTPGSVVIDVGIN 224 (276)
T ss_dssp CSCHHHHHHHSSEEEECSSC----TTCBCGGG---CCTTCEEEECCCE
T ss_pred cccHHHhhccCCEEEECCCC----CccccHhh---ccCCcEEEEeccC
Confidence 46899999999999999984 34677655 5999999998743
No 146
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=71.59 E-value=4.1 Score=33.09 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=32.6
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRG 88 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg 88 (180)
..+|++.+++||+|+..++. -++|..+. +|+|+++|+++..
T Consensus 194 t~~L~~~~~~ADIVI~Avg~----p~~I~~~~---vk~GavVIDVgi~ 234 (285)
T 3p2o_A 194 TKDLSLYTRQADLIIVAAGC----VNLLRSDM---VKEGVIVVDVGIN 234 (285)
T ss_dssp CSCHHHHHTTCSEEEECSSC----TTCBCGGG---SCTTEEEEECCCE
T ss_pred chhHHHHhhcCCEEEECCCC----CCcCCHHH---cCCCeEEEEeccC
Confidence 35899999999999999983 34576655 5999999988643
No 147
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=71.17 E-value=11 Score=32.23 Aligned_cols=64 Identities=11% Similarity=0.118 Sum_probs=40.2
Q ss_pred eeccCHHHHhccCCEEEEccCCCCCCcceeC--------HhHHhccCCCcEEEecCCCCccCHHHHHHHHhc
Q psy5266 39 YLILVIRTRSAQSDFIFVTCALTKDTEQLIG--------RKQFSLMKPTAILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg--------~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
....++++.++.||+|++++|-.....+-.+ ......++++.++|+.+--..-..+.+.+.+++
T Consensus 67 ~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 67 RFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 3456899999999999999986533222222 223334889999999874222233445555443
No 148
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=70.22 E-value=6.2 Score=32.56 Aligned_cols=68 Identities=10% Similarity=0.162 Sum_probs=47.2
Q ss_pred eeeeEEEeccccccC-------Cccce--e--eccCHHHHhccCCEEEEccCCCC-CCcceeCHhHHhccCCCcEEEecC
Q psy5266 19 LIVCVLIRYHVDLTG-------GSKQV--Y--LILVIRTRSAQSDFIFVTCALTK-DTEQLIGRKQFSLMKPTAILINTS 86 (180)
Q Consensus 19 ~~~~~~~~~~~~~~~-------~~~~~--~--~~~~l~~l~~~~D~v~~h~pl~~-~T~glIg~~~i~~mk~g~~lvn~~ 86 (180)
.+|+++..+|.+... ..... . ...++.+.++.+|+|+.+.+... .+..++....++.||++.++++++
T Consensus 188 ~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 188 GLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 457788888876432 11111 1 22357778889999998887543 355667889999999999999986
No 149
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=69.37 E-value=3.7 Score=33.37 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=33.1
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRG 88 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg 88 (180)
..+|++.+++||+|+..++-- ++|..+.+ |+|+++|.++..
T Consensus 193 t~~L~~~~~~ADIVI~Avg~p----~lI~~~~v---k~GavVIDVgi~ 233 (288)
T 1b0a_A 193 TKNLRHHVENADLLIVAVGKP----GFIPGDWI---KEGAIVIDVGIN 233 (288)
T ss_dssp CSCHHHHHHHCSEEEECSCCT----TCBCTTTS---CTTCEEEECCCE
T ss_pred chhHHHHhccCCEEEECCCCc----CcCCHHHc---CCCcEEEEccCC
Confidence 368999999999999999832 36777664 899999998754
No 150
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=68.98 E-value=5.8 Score=32.43 Aligned_cols=43 Identities=16% Similarity=0.288 Sum_probs=34.4
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCc
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL 90 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~ 90 (180)
..+|++.+++||+|+..++-- ++|..+. +|+|+++|.++...+
T Consensus 199 t~~L~~~~~~ADIVI~Avg~p----~~I~~~~---vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 199 TAHLDEEVNKGDILVVATGQP----EMVKGEW---IKPGAIVIDCGINYV 241 (301)
T ss_dssp CSSHHHHHTTCSEEEECCCCT----TCBCGGG---SCTTCEEEECCCBC-
T ss_pred cccHHHHhccCCEEEECCCCc----ccCCHHH---cCCCcEEEEccCCCc
Confidence 458999999999999998852 3677766 479999999987553
No 151
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=67.72 E-value=5.9 Score=32.07 Aligned_cols=41 Identities=15% Similarity=0.285 Sum_probs=33.4
Q ss_pred cCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCC
Q psy5266 42 LVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG 89 (180)
Q Consensus 42 ~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~ 89 (180)
.+|.+.+++||+|+..++-. ++|..+.+ |+|+++|.++...
T Consensus 195 ~~L~~~~~~ADIVI~Avg~p----~~I~~~~v---k~GavVIDVgi~r 235 (281)
T 2c2x_A 195 RDLPALTRQADIVVAAVGVA----HLLTADMV---RPGAAVIDVGVSR 235 (281)
T ss_dssp SCHHHHHTTCSEEEECSCCT----TCBCGGGS---CTTCEEEECCEEE
T ss_pred hHHHHHHhhCCEEEECCCCC----cccCHHHc---CCCcEEEEccCCC
Confidence 68999999999999998832 36777764 8899999987654
No 152
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=67.25 E-value=7.5 Score=33.28 Aligned_cols=66 Identities=14% Similarity=0.138 Sum_probs=45.2
Q ss_pred eeccCHHHHhccCCEEEEccCCCCCC-cceeC--------HhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCc
Q psy5266 39 YLILVIRTRSAQSDFIFVTCALTKDT-EQLIG--------RKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKI 105 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~pl~~~T-~glIg--------~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i 105 (180)
....++++.++.||+|++++|-.... .+-.+ ..... +++|+++|..+--..-..+.+.+.+.+..+
T Consensus 98 ~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 98 RATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp EEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred EEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 34568899999999999999954211 11111 23334 899999998876665567778887776544
No 153
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=65.27 E-value=1.3 Score=39.05 Aligned_cols=44 Identities=27% Similarity=0.328 Sum_probs=35.0
Q ss_pred cCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCC
Q psy5266 42 LVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRG 88 (180)
Q Consensus 42 ~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg 88 (180)
.++.+++++||+|++++|..... .++. +.+..||+|++ +..+.|
T Consensus 113 ~s~aEAa~~ADVVILaVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaG 156 (525)
T 3fr7_A 113 GDIWETVSGSDLVLLLISDAAQA-DNYE-KIFSHMKPNSI-LGLSHG 156 (525)
T ss_dssp EEHHHHHHHCSEEEECSCHHHHH-HHHH-HHHHHSCTTCE-EEESSS
T ss_pred CCHHHHHhcCCEEEECCChHHHH-HHHH-HHHHhcCCCCe-EEEeCC
Confidence 58999999999999999976543 4665 67788999988 455666
No 154
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=64.90 E-value=8.4 Score=32.93 Aligned_cols=52 Identities=12% Similarity=0.157 Sum_probs=31.4
Q ss_pred hccCCEEEEccCCCCCCc--ceeC--------HhHHhccCCCcEEEecCCCCccCHHHHHHH
Q psy5266 48 SAQSDFIFVTCALTKDTE--QLIG--------RKQFSLMKPTAILINTSRGGLLDQEALVEF 99 (180)
Q Consensus 48 ~~~~D~v~~h~pl~~~T~--glIg--------~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~ 99 (180)
++.||+|++++|-..... +-.+ .+....|++|.++|..+--..-..+.+.+.
T Consensus 81 ~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~ 142 (431)
T 3ojo_A 81 PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKP 142 (431)
T ss_dssp CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHH
T ss_pred hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHH
Confidence 357999999999543221 2222 223345999999998774443344555443
No 155
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=64.49 E-value=6.8 Score=30.20 Aligned_cols=85 Identities=12% Similarity=0.094 Sum_probs=52.9
Q ss_pred cCCccccc-----eeeeEEEeccccccCC---cc--ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCc
Q psy5266 11 TGTPGQVH-----LIVCVLIRYHVDLTGG---SK--QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTA 80 (180)
Q Consensus 11 ~G~iG~~~-----~~~~~~~~~~~~~~~~---~~--~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~ 80 (180)
+|.+|+.+ -.+..+..||++.... .+ +.....+++++++++|+|++++| .... .+.+..++++.
T Consensus 11 ~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~~~l~~~~ 84 (259)
T 2ahr_A 11 VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVLKPLHFKQ 84 (259)
T ss_dssp CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHHTTSCCCS
T ss_pred CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHHHHhccCC
Confidence 46666652 0134566777654321 11 22345689999999999999999 4333 34445567888
Q ss_pred EEEecCCCCccCHHHHHHHHhcC
Q psy5266 81 ILINTSRGGLLDQEALVEFLRDK 103 (180)
Q Consensus 81 ~lvn~~Rg~~vd~~al~~~L~~~ 103 (180)
++++...+- ..+.+.+.+..+
T Consensus 85 ~vv~~~~~~--~~~~l~~~~~~~ 105 (259)
T 2ahr_A 85 PIISMAAGI--SLQRLATFVGQD 105 (259)
T ss_dssp CEEECCTTC--CHHHHHHHHCTT
T ss_pred EEEEeCCCC--CHHHHHHhcCCC
Confidence 888876553 345677777654
No 156
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=64.20 E-value=12 Score=30.96 Aligned_cols=73 Identities=12% Similarity=0.144 Sum_probs=48.2
Q ss_pred cCCcccccee-------eeEEEeccccccC---Ccc------c--eeeccCHHHHhccCCEEEEccCCCCCCcceeCHhH
Q psy5266 11 TGTPGQVHLI-------VCVLIRYHVDLTG---GSK------Q--VYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQ 72 (180)
Q Consensus 11 ~G~iG~~~~~-------~~~~~~~~~~~~~---~~~------~--~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~ 72 (180)
+|.+|+.|.. ...+..|+++... ..+ + .....++++++++||+|+++.|-. ...-++..
T Consensus 137 aG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~-~~~pvl~~-- 213 (350)
T 1x7d_A 137 NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADK-AYATIITP-- 213 (350)
T ss_dssp CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCS-SEEEEECG--
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCC-CCCceecH--
Confidence 6777776421 2456677766432 110 2 234678999999999999999965 23456653
Q ss_pred HhccCCCcEEEecCC
Q psy5266 73 FSLMKPTAILINTSR 87 (180)
Q Consensus 73 i~~mk~g~~lvn~~R 87 (180)
..+++|..++.++-
T Consensus 214 -~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 214 -DMLEPGMHLNAVGG 227 (350)
T ss_dssp -GGCCTTCEEEECSC
T ss_pred -HHcCCCCEEEECCC
Confidence 46788999888763
No 157
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=63.14 E-value=9.9 Score=30.52 Aligned_cols=59 Identities=14% Similarity=0.162 Sum_probs=38.3
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhc
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
..++++.++.+|+|++++|-.. +..++ ......++++.+++.. .+.......+.+.+++
T Consensus 66 ~~~~~~~~~~~D~vi~~v~~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 66 TSDIGLAVKDADVILIVVPAIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp ESCHHHHHTTCSEEEECSCGGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred cCCHHHHHhcCCEEEEeCCchH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 4588898999999999999553 33443 2333457889888887 4412233345555544
No 158
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=63.07 E-value=6.9 Score=33.72 Aligned_cols=66 Identities=11% Similarity=0.200 Sum_probs=43.5
Q ss_pred EEEeccccccC-------------CccceeeccCHHHHhccCCEEEEccCCC-----------CCCcceeCH--hHH---
Q psy5266 23 VLIRYHVDLTG-------------GSKQVYLILVIRTRSAQSDFIFVTCALT-----------KDTEQLIGR--KQF--- 73 (180)
Q Consensus 23 ~~~~~~~~~~~-------------~~~~~~~~~~l~~l~~~~D~v~~h~pl~-----------~~T~glIg~--~~i--- 73 (180)
.+..||.+... ....+....++++.++.||||++.++-- +...|+.+. +..
T Consensus 35 eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~G 114 (450)
T 3fef_A 35 TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPG 114 (450)
T ss_dssp EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCc
Confidence 77888876421 0112334568999999999999999742 566677443 222
Q ss_pred -------------------hccCCCcEEEecCCC
Q psy5266 74 -------------------SLMKPTAILINTSRG 88 (180)
Q Consensus 74 -------------------~~mk~g~~lvn~~Rg 88 (180)
.+..|+++++|++-.
T Consensus 115 Gi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNP 148 (450)
T 3fef_A 115 GIIRGLRAVPIFAEIARAIRDYAPESWVINYTNP 148 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred hhhcccccHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 234578899988654
No 159
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=62.98 E-value=7.9 Score=31.47 Aligned_cols=70 Identities=16% Similarity=0.142 Sum_probs=45.7
Q ss_pred cCCccccce------e-eeEEEeccccccC--Ccc------ce-eeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHh
Q psy5266 11 TGTPGQVHL------I-VCVLIRYHVDLTG--GSK------QV-YLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFS 74 (180)
Q Consensus 11 ~G~iG~~~~------~-~~~~~~~~~~~~~--~~~------~~-~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~ 74 (180)
+|.+|..|. . ..++..|+++ .. ..+ +. ....++++.+++||+|+.+.|-. .-++.. .
T Consensus 129 aG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~---~pvl~~---~ 201 (313)
T 3hdj_A 129 AGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRST---TPLFAG---Q 201 (313)
T ss_dssp CSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCS---SCSSCG---G
T ss_pred ccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCC---CcccCH---H
Confidence 566666531 1 3467788887 32 111 11 12239999999999999999853 355553 4
Q ss_pred ccCCCcEEEecCC
Q psy5266 75 LMKPTAILINTSR 87 (180)
Q Consensus 75 ~mk~g~~lvn~~R 87 (180)
.+|+|++++.++-
T Consensus 202 ~l~~G~~V~~vGs 214 (313)
T 3hdj_A 202 ALRAGAFVGAIGS 214 (313)
T ss_dssp GCCTTCEEEECCC
T ss_pred HcCCCcEEEECCC
Confidence 5899999988754
No 160
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=62.87 E-value=6.4 Score=32.17 Aligned_cols=38 Identities=8% Similarity=0.117 Sum_probs=30.8
Q ss_pred CHH--HHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCC
Q psy5266 43 VIR--TRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSR 87 (180)
Q Consensus 43 ~l~--~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~R 87 (180)
+|+ +.+++||+|+..++. -++|..+. +|+|+++|+++.
T Consensus 201 ~l~l~~~~~~ADIVI~Avg~----p~~I~~~~---vk~GavVIDvgi 240 (300)
T 4a26_A 201 TEDMIDYLRTADIVIAAMGQ----PGYVKGEW---IKEGAAVVDVGT 240 (300)
T ss_dssp HHHHHHHHHTCSEEEECSCC----TTCBCGGG---SCTTCEEEECCC
T ss_pred CchhhhhhccCCEEEECCCC----CCCCcHHh---cCCCcEEEEEec
Confidence 577 999999999999994 34676655 599999998864
No 161
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=62.80 E-value=15 Score=30.99 Aligned_cols=43 Identities=9% Similarity=0.113 Sum_probs=36.3
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRG 88 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg 88 (180)
..+|+|.++.+|+++=.- +-+++.++.+++|+++.+++-.++.
T Consensus 254 ~~~L~eav~~ADVlIG~S-----ap~l~t~emVk~Ma~~pIIfalSNP 296 (388)
T 1vl6_A 254 SGDLETALEGADFFIGVS-----RGNILKPEWIKKMSRKPVIFALANP 296 (388)
T ss_dssp CSCHHHHHTTCSEEEECS-----CSSCSCHHHHTTSCSSCEEEECCSS
T ss_pred hhhHHHHHccCCEEEEeC-----CCCccCHHHHHhcCCCCEEEEcCCC
Confidence 567999999999987662 2499999999999999999888764
No 162
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=60.49 E-value=4.3 Score=33.15 Aligned_cols=71 Identities=11% Similarity=-0.040 Sum_probs=44.1
Q ss_pred eeccCHHHHhccCCEEEEccCCCCCCc-ceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecC
Q psy5266 39 YLILVIRTRSAQSDFIFVTCALTKDTE-QLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVM 113 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~pl~~~T~-glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~ 113 (180)
....++++.++.||+|+.++|-..+.. .++ .+....++++++++..+.+ +....+.+.++. ....+.+-.+
T Consensus 76 ~~~~~~~eav~~aDlVieavpe~~~~k~~v~-~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~ 147 (319)
T 2dpo_A 76 SSCTNLAEAVEGVVHIQECVPENLDLKRKIF-AQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPV 147 (319)
T ss_dssp EEECCHHHHTTTEEEEEECCCSCHHHHHHHH-HHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEEC
T ss_pred EEeCCHHHHHhcCCEEEEeccCCHHHHHHHH-HHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecC
Confidence 345789999999999999999653322 233 3444568889988744333 445566665543 2233444444
No 163
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=59.66 E-value=15 Score=29.51 Aligned_cols=59 Identities=12% Similarity=0.140 Sum_probs=40.8
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhc
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
...+..+.+++||+|++++| ......++. +....++++.++|.+.-|- ..+.+.+.+.+
T Consensus 74 ~~~~~~e~~~~aDvVilav~-~~~~~~vl~-~l~~~l~~~~ivvs~s~gi--~~~~l~~~l~~ 132 (322)
T 2izz_A 74 LTPHNKETVQHSDVLFLAVK-PHIIPFILD-EIGADIEDRHIVVSCAAGV--TISSIEKKLSA 132 (322)
T ss_dssp EESCHHHHHHHCSEEEECSC-GGGHHHHHH-HHGGGCCTTCEEEECCTTC--CHHHHHHHHHT
T ss_pred EeCChHHHhccCCEEEEEeC-HHHHHHHHH-HHHhhcCCCCEEEEeCCCC--CHHHHHHHHhh
Confidence 34578899999999999999 444444442 3334577888999875542 34567777765
No 164
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=57.84 E-value=4.4 Score=29.06 Aligned_cols=77 Identities=8% Similarity=0.033 Sum_probs=48.9
Q ss_pred EEEecccccc-CCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHh
Q psy5266 23 VLIRYHVDLT-GGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLR 101 (180)
Q Consensus 23 ~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~ 101 (180)
++..++++.. ....+..-+.+++++-...|++++.+| .+....++.. +.....+.+++.. +.. .+++.+.++
T Consensus 42 ~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~~--~~~~g~~~i~i~~--~~~--~~~l~~~a~ 114 (145)
T 2duw_A 42 HVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQE--AIAIGAKTLWLQL--GVI--NEQAAVLAR 114 (145)
T ss_dssp CEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHHH--HHHHTCCEEECCT--TCC--CHHHHHHHH
T ss_pred EEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHHH--HHHcCCCEEEEcC--ChH--HHHHHHHHH
Confidence 4666666652 122344556789999999999999999 5666666633 3334445555543 222 667777788
Q ss_pred cCCcc
Q psy5266 102 DKKIG 106 (180)
Q Consensus 102 ~~~i~ 106 (180)
+..+.
T Consensus 115 ~~Gi~ 119 (145)
T 2duw_A 115 EAGLS 119 (145)
T ss_dssp TTTCE
T ss_pred HcCCE
Confidence 77664
No 165
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=57.44 E-value=16 Score=30.19 Aligned_cols=63 Identities=10% Similarity=0.053 Sum_probs=41.0
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCH----HHHHHHHhcCC
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQ----EALVEFLRDKK 104 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~----~al~~~L~~~~ 104 (180)
...++++.++.||+|++++|-. ....++ .+....++++.++|++..|-..+. +.+.+.+....
T Consensus 89 ~t~d~~ea~~~aDvVilaVp~~-~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~ 155 (356)
T 3k96_A 89 AYCDLKASLEGVTDILIVVPSF-AFHEVI-TRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVP 155 (356)
T ss_dssp EESCHHHHHTTCCEEEECCCHH-HHHHHH-HHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCC
T ss_pred EECCHHHHHhcCCEEEECCCHH-HHHHHH-HHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCC
Confidence 4568999999999999999943 333333 222334778999999877654432 34555555333
No 166
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=57.14 E-value=6.4 Score=29.25 Aligned_cols=70 Identities=11% Similarity=0.142 Sum_probs=43.9
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccC------------HHHHHHHHhcCCcceE
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLD------------QEALVEFLRDKKIGGA 108 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd------------~~al~~~L~~~~i~~~ 108 (180)
..++++.++++|+|++++|- .....++. +....++ +.++++++.|--.+ .+.+.+.+....+
T Consensus 55 ~~~~~~~~~~~D~Vi~~~~~-~~~~~~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~~~--- 128 (212)
T 1jay_A 55 GMKNEDAAEACDIAVLTIPW-EHAIDTAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKV--- 128 (212)
T ss_dssp EEEHHHHHHHCSEEEECSCH-HHHHHHHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSCE---
T ss_pred hhhHHHHHhcCCEEEEeCCh-hhHHHHHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCCeE---
Confidence 46788999999999999993 23333332 1222354 88999988754321 5677777764333
Q ss_pred EeecCCCCC
Q psy5266 109 GLDVMIPEP 117 (180)
Q Consensus 109 ~lDv~~~ep 117 (180)
++.+.+.|
T Consensus 129 -v~~~~~~~ 136 (212)
T 1jay_A 129 -VSALHTIP 136 (212)
T ss_dssp -EECCTTCC
T ss_pred -EEEccchH
Confidence 34554444
No 167
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=57.02 E-value=23 Score=30.44 Aligned_cols=62 Identities=13% Similarity=0.103 Sum_probs=37.0
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcceeCHh--------HHhccCCCcEEEecCCCCccCHHHHHHHHh
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLIGRK--------QFSLMKPTAILINTSRGGLLDQEALVEFLR 101 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~--------~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~ 101 (180)
...++++.++.||+|++++|-.....|-.|.. ....+++++++|+.+--.+-..+.+.+.+.
T Consensus 74 ~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 74 FSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp EECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 44578888999999999998532222222222 223488999999886211222334544444
No 168
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=56.30 E-value=10 Score=29.14 Aligned_cols=74 Identities=14% Similarity=0.196 Sum_probs=43.5
Q ss_pred EEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhc
Q psy5266 23 VLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
.+..||++... .+.....+.++.+++||+|++++| ......++. +....++ +..++...-+ ++.+.+.+.+.+
T Consensus 33 ~v~~~~~~~~~--~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~-~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~ 105 (262)
T 2rcy_A 33 NLFYYGPSKKN--TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN-NIKPYLS-SKLLISICGG--LNIGKLEEMVGS 105 (262)
T ss_dssp GEEEECSSCCS--SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-HSGGGCT-TCEEEECCSS--CCHHHHHHHHCT
T ss_pred eEEEEeCCccc--CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-HHHHhcC-CCEEEEECCC--CCHHHHHHHhCC
Confidence 45566655443 233445688999999999999999 444444442 2223353 4455544333 334567777765
Q ss_pred C
Q psy5266 103 K 103 (180)
Q Consensus 103 ~ 103 (180)
+
T Consensus 106 ~ 106 (262)
T 2rcy_A 106 E 106 (262)
T ss_dssp T
T ss_pred C
Confidence 4
No 169
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=56.18 E-value=54 Score=26.67 Aligned_cols=74 Identities=8% Similarity=0.029 Sum_probs=44.9
Q ss_pred eeeEEEeccccccCCcc---------ceeeccCHHHHhccCCEEEEcc--CCC-----CC-----CcceeCHhHHhccCC
Q psy5266 20 IVCVLIRYHVDLTGGSK---------QVYLILVIRTRSAQSDFIFVTC--ALT-----KD-----TEQLIGRKQFSLMKP 78 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~~---------~~~~~~~l~~l~~~~D~v~~h~--pl~-----~~-----T~glIg~~~i~~mk~ 78 (180)
||+.+....|.-..+.+ .+....+++|.++.+|+|..-. ... .+ ..-.++.+.++++|+
T Consensus 177 ~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~ 256 (309)
T 4f2g_A 177 LDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANS 256 (309)
T ss_dssp HTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCT
T ss_pred cCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCC
Confidence 46666555554332222 2345679999999999997643 000 00 124578888888888
Q ss_pred CcEEEec---CCCCccCH
Q psy5266 79 TAILINT---SRGGLLDQ 93 (180)
Q Consensus 79 g~~lvn~---~Rg~~vd~ 93 (180)
++++.-+ .||.-|+.
T Consensus 257 ~ai~mH~lP~~Rg~EI~~ 274 (309)
T 4f2g_A 257 DALFMHCLPAHRGEEVTA 274 (309)
T ss_dssp TCEEEECSSCCBTTTBCH
T ss_pred CeEEECCCCCCCCceecH
Confidence 8888766 35654443
No 170
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=54.24 E-value=14 Score=29.76 Aligned_cols=48 Identities=10% Similarity=0.099 Sum_probs=33.4
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCC
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG 89 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~ 89 (180)
...++++.++.||+|++++|- .....++ ......++++.+++.+..|-
T Consensus 80 ~~~~~~~~~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi 127 (354)
T 1x0v_A 80 AVPDVVQAAEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGV 127 (354)
T ss_dssp EESSHHHHHTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCB
T ss_pred EEcCHHHHHcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCcc
Confidence 346788999999999999994 3333333 12223467788999887664
No 171
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=54.07 E-value=0.65 Score=36.18 Aligned_cols=84 Identities=13% Similarity=0.120 Sum_probs=48.4
Q ss_pred cCCccccc---e--ee-eEEEeccccccC---Ccc--ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCC-
Q psy5266 11 TGTPGQVH---L--IV-CVLIRYHVDLTG---GSK--QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKP- 78 (180)
Q Consensus 11 ~G~iG~~~---~--~~-~~~~~~~~~~~~---~~~--~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~- 78 (180)
.|.+|+.+ + -| ..+..|+++... ..+ +.....++++++ ++|+|++++| ......++ ..+++
T Consensus 8 ~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~-----~~l~~~ 80 (263)
T 1yqg_A 8 GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC-----KNIRTN 80 (263)
T ss_dssp CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH-----TTCCCT
T ss_pred chHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH-----HHhccC
Confidence 46666652 0 13 456667665332 111 223345677888 9999999999 54433333 23322
Q ss_pred CcEEEecCCCCccCHHHHHHHHhcC
Q psy5266 79 TAILINTSRGGLLDQEALVEFLRDK 103 (180)
Q Consensus 79 g~~lvn~~Rg~~vd~~al~~~L~~~ 103 (180)
+.+++++..+- ..+.+.+.+..+
T Consensus 81 ~~ivv~~~~g~--~~~~l~~~~~~~ 103 (263)
T 1yqg_A 81 GALVLSVAAGL--SVGTLSRYLGGT 103 (263)
T ss_dssp TCEEEECCTTC--CHHHHHHHTTSC
T ss_pred CCEEEEecCCC--CHHHHHHHcCCC
Confidence 78888874442 236777777663
No 172
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=53.95 E-value=11 Score=31.94 Aligned_cols=52 Identities=8% Similarity=-0.019 Sum_probs=35.9
Q ss_pred cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCC
Q psy5266 36 KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG 89 (180)
Q Consensus 36 ~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~ 89 (180)
+.+....+|++.++.||+|++.+|-. ..+.++. ..-..++++..+|++..|-
T Consensus 103 ~~i~~t~dl~~al~~ad~ii~avPs~-~~r~~l~-~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 103 DNLVANPDLIDSVKDVDIIVFNIPHQ-FLPRICS-QLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp SSEEEESCHHHHHTTCSEEEECSCGG-GHHHHHH-HHTTTSCTTCEEEECCCSC
T ss_pred CCcEEeCCHHHHHhcCCEEEEECChh-hhHHHHH-HhccccCCCceeEEecccc
Confidence 34456678999999999999999932 2222221 1223466789999999884
No 173
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=53.91 E-value=3.5 Score=32.35 Aligned_cols=62 Identities=13% Similarity=0.057 Sum_probs=37.7
Q ss_pred cCCccccceeeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecC
Q psy5266 11 TGTPGQVHLIVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTS 86 (180)
Q Consensus 11 ~G~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~ 86 (180)
+|.+|.. ++..+...+..+..+.. .++ +++|| ++++|-. ....++ .+....++++++++.++
T Consensus 14 ~G~~G~s--LA~~L~~~G~~V~~~~~-------~~~-~~~aD--ilavP~~-ai~~vl-~~l~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 14 DGSSTVN--MAEKLDSVGHYVTVLHA-------PED-IRDFE--LVVIDAH-GVEGYV-EKLSAFARRGQMFLHTS 75 (232)
T ss_dssp CSCCCSC--HHHHHHHTTCEEEECSS-------GGG-GGGCS--EEEECSS-CHHHHH-HHHHTTCCTTCEEEECC
T ss_pred eCHHHHH--HHHHHHHCCCEEEEecC-------HHH-hccCC--EEEEcHH-HHHHHH-HHHHHhcCCCCEEEEEC
Confidence 6888887 65544333333322222 133 67899 7778864 555555 34445688899999974
No 174
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=53.79 E-value=17 Score=31.39 Aligned_cols=70 Identities=20% Similarity=0.208 Sum_probs=43.0
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE-ecCCCCccCHHHHHHHHhcCCcceEEeecCC
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI-NTSRGGLLDQEALVEFLRDKKIGGAGLDVMI 114 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv-n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~ 114 (180)
...+++ .+++||+|+.++|-..+...-+=.+....++++++++ |++- +....+.+.++. .-..+++..+.
T Consensus 121 ~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs---l~i~~ia~~~~~-p~r~iG~Hffn 191 (460)
T 3k6j_A 121 ITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSS---LDLNEISSVLRD-PSNLVGIHFFN 191 (460)
T ss_dssp EESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS---SCHHHHHTTSSS-GGGEEEEECCS
T ss_pred EeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC---hhHHHHHHhccC-CcceEEEEecc
Confidence 345675 6889999999999654322222134445688999885 5553 445566555543 23466666765
No 175
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=52.94 E-value=6 Score=34.03 Aligned_cols=82 Identities=10% Similarity=0.017 Sum_probs=50.1
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc---------CHHHHHHHHhcCCcceEEeecCCCCCCCCC-
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL---------DQEALVEFLRDKKIGGAGLDVMIPEPLPAD- 121 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v---------d~~al~~~L~~~~i~~~~lDv~~~ep~~~~- 121 (180)
..+.++|.+++|.+.+++ ++. |+.++-+.|...- ...++.++++++|++.. ....+...+
T Consensus 207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVil----t~gt~~iI~~ 282 (436)
T 3h9u_A 207 VMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVT----TTGNDDIITS 282 (436)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE----CSSCSCSBCT
T ss_pred CcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEE----CCCCcCccCH
Confidence 456789999999999986 555 8887777664311 11258889999999542 111111112
Q ss_pred CCCCCCC------ceeec--ccCHHHHHHH
Q psy5266 122 HPLVQLD------NCGNG--LLDQEALVEF 143 (180)
Q Consensus 122 ~~l~~~~------Nv~~g--~~~~~al~~~ 143 (180)
+.+-.++ |++++ .++.+++.+.
T Consensus 283 e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 283 EHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp TTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred HHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 2222232 66666 4788888763
No 176
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=52.57 E-value=21 Score=30.68 Aligned_cols=63 Identities=17% Similarity=0.169 Sum_probs=39.5
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcc-----eeC--------HhHHhccCCCcEEEecCCCCccCHHHHHHHHhc
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQ-----LIG--------RKQFSLMKPTAILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~g-----lIg--------~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
...++.+.++.||+|++++|-.....| -.+ ......++++.++|+.+--..-..+.+.+.+++
T Consensus 76 ~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 76 FSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 345677888999999999985432111 111 223345888999998764333334557777766
No 177
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=52.17 E-value=6 Score=28.12 Aligned_cols=76 Identities=11% Similarity=0.087 Sum_probs=47.8
Q ss_pred EEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhc
Q psy5266 23 VLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRD 102 (180)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~ 102 (180)
++..++++... ..+..-+.|++|+....|++++.+| .+....++.. .+ .+..+.+++..+ + . .+++.+..++
T Consensus 43 ~V~~vnp~~~~-i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~~~-~~-~~g~~~i~~~~~-~--~-~~~l~~~a~~ 114 (138)
T 1y81_A 43 EVLPVNPNYDE-IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVAKE-AV-EAGFKKLWFQPG-A--E-SEEIRRFLEK 114 (138)
T ss_dssp EEEEECTTCSE-ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHHHH-HH-HTTCCEEEECTT-S--C-CHHHHHHHHH
T ss_pred EEEEeCCCCCe-ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHHHH-HH-HcCCCEEEEcCc-c--H-HHHHHHHHHH
Confidence 56666666422 2345567799999999999999999 5666666633 33 344455555442 2 2 4566676676
Q ss_pred CCcc
Q psy5266 103 KKIG 106 (180)
Q Consensus 103 ~~i~ 106 (180)
..+.
T Consensus 115 ~Gi~ 118 (138)
T 1y81_A 115 AGVE 118 (138)
T ss_dssp HTCE
T ss_pred CCCE
Confidence 6553
No 178
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=51.23 E-value=14 Score=28.25 Aligned_cols=76 Identities=12% Similarity=0.110 Sum_probs=46.4
Q ss_pred EEEeccccccCC---c--cceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHH
Q psy5266 23 VLIRYHVDLTGG---S--KQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALV 97 (180)
Q Consensus 23 ~~~~~~~~~~~~---~--~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~ 97 (180)
.+..||++.... . .+.....++++++++||+|++++|-. ....++ .+....++++.++|...-+ +..+.+.
T Consensus 31 ~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~-~~~~v~-~~l~~~l~~~~~vvs~~~g--i~~~~l~ 106 (247)
T 3gt0_A 31 QIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPD-LYASII-NEIKEIIKNDAIIVTIAAG--KSIESTE 106 (247)
T ss_dssp GEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTT-THHHHC----CCSSCTTCEEEECSCC--SCHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHH-HHHHHH-HHHHhhcCCCCEEEEecCC--CCHHHHH
Confidence 556676654321 1 12345678999999999999999732 333344 2333457788888865444 3356677
Q ss_pred HHHhc
Q psy5266 98 EFLRD 102 (180)
Q Consensus 98 ~~L~~ 102 (180)
+.+..
T Consensus 107 ~~~~~ 111 (247)
T 3gt0_A 107 NAFNK 111 (247)
T ss_dssp HHHCS
T ss_pred HHhCC
Confidence 77754
No 179
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=50.62 E-value=9.8 Score=31.28 Aligned_cols=42 Identities=17% Similarity=0.140 Sum_probs=32.8
Q ss_pred cCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCC
Q psy5266 42 LVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG 89 (180)
Q Consensus 42 ~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~ 89 (180)
.+|++.+++||+|+..++-. .-+|..+. +|+|+++|.++-..
T Consensus 237 ~~L~e~l~~ADIVIsAtg~p---~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 237 DLLKKCSLDSDVVITGVPSE---NYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHHCSEEEECCCCT---TCCBCTTT---SCTTEEEEECSSSC
T ss_pred hHHHHHhccCCEEEECCCCC---cceeCHHH---cCCCeEEEEcCCCc
Confidence 67999999999999998742 22376666 48899999997654
No 180
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=50.41 E-value=17 Score=29.66 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=31.1
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTS 86 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~ 86 (180)
..+|++..++||||+..+.- -++|..+. .|+|+++|+++
T Consensus 213 T~dl~~~~~~ADIvV~A~G~----p~~i~~d~---vk~GavVIDVG 251 (303)
T 4b4u_A 213 TQNLPELVKQADIIVGAVGK----AELIQKDW---IKQGAVVVDAG 251 (303)
T ss_dssp CSSHHHHHHTCSEEEECSCS----TTCBCGGG---SCTTCEEEECC
T ss_pred CCCHHHHhhcCCeEEeccCC----CCcccccc---ccCCCEEEEec
Confidence 45899999999999998653 35676654 68999999885
No 181
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=49.18 E-value=2.4 Score=36.80 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=35.3
Q ss_pred cCCCCCCcceeCHhHHhc-----cCC-CcEEEecCCCCcc---------CHHHHHHHHhcCCcce
Q psy5266 58 CALTKDTEQLIGRKQFSL-----MKP-TAILINTSRGGLL---------DQEALVEFLRDKKIGG 107 (180)
Q Consensus 58 ~pl~~~T~glIg~~~i~~-----mk~-g~~lvn~~Rg~~v---------d~~al~~~L~~~~i~~ 107 (180)
..+.++|.+++|.+.+++ ++. |+.++-+.|...- ....+.++++++|++.
T Consensus 243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv 307 (464)
T 3n58_A 243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVV 307 (464)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEE
T ss_pred CcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEE
Confidence 467899999999999986 665 8877776553211 1113678889999943
No 182
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=48.11 E-value=6.9 Score=30.18 Aligned_cols=45 Identities=7% Similarity=0.096 Sum_probs=31.0
Q ss_pred eeccCHHHHhccCCEEEEccCCCCCCcceeCHhH-HhccCCCcEEEecC
Q psy5266 39 YLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQ-FSLMKPTAILINTS 86 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~-i~~mk~g~~lvn~~ 86 (180)
....++++++++||+|++++|-.... ..+. +. ...+ ++.++|+++
T Consensus 79 ~~~~~~~e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 79 VHLAAFADVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIA 124 (245)
T ss_dssp CEEEEHHHHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECC
T ss_pred eeccCHHHHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECC
Confidence 34568999999999999999965332 2221 11 1224 788999998
No 183
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=47.52 E-value=13 Score=29.65 Aligned_cols=91 Identities=13% Similarity=0.052 Sum_probs=47.4
Q ss_pred cCCccccce-----eeeE-EEecccccc-CCccceeeccCHHHHhc--cCCEEEEccCCCCCCcceeCHhHHhccCCCcE
Q psy5266 11 TGTPGQVHL-----IVCV-LIRYHVDLT-GGSKQVYLILVIRTRSA--QSDFIFVTCALTKDTEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 11 ~G~iG~~~~-----~~~~-~~~~~~~~~-~~~~~~~~~~~l~~l~~--~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~ 81 (180)
+|++|+.|. .+.+ +...++... ....+..-+.+++++.. ..|++++..|-. ....++... ++.|..
T Consensus 16 sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~-~~~~~~~ea----~~~Gi~ 90 (288)
T 2nu8_A 16 TGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAP-FCKDSILEA----IDAGIK 90 (288)
T ss_dssp TSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGG-GHHHHHHHH----HHTTCS
T ss_pred CChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHH-HHHHHHHHH----HHCCCC
Confidence 577777641 1233 234455432 11223445779999998 899999999942 222222111 222322
Q ss_pred -EEecCCCC-ccCHHHHHHHHhcCCcc
Q psy5266 82 -LINTSRGG-LLDQEALVEFLRDKKIG 106 (180)
Q Consensus 82 -lvn~~Rg~-~vd~~al~~~L~~~~i~ 106 (180)
+|..+-|- .-+.+.+.++.++..+.
T Consensus 91 ~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 91 LIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp EEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 34343332 22334677777766653
No 184
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=46.76 E-value=97 Score=25.48 Aligned_cols=63 Identities=11% Similarity=0.088 Sum_probs=45.9
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccC-HHHHHHHHhcCCc
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLD-QEALVEFLRDKKI 105 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd-~~al~~~L~~~~i 105 (180)
..+-.|-.+.+|++.+.+|.-+.|..++ +..+..++.|+++-|+=--..+- ...|+. ++..|+
T Consensus 132 tsDD~EAvk~AEi~IlftPfG~~t~~Ia-kkii~~lpEgAII~nTCTipp~~ly~~le~-l~R~Dv 195 (358)
T 2b0j_A 132 TSDDREAVEGADIVITWLPKGNKQPDII-KKFADAIPEGAIVTHACTIPTTKFAKIFKD-LGREDL 195 (358)
T ss_dssp ESCHHHHHTTCSEEEECCTTCTTHHHHH-HHHGGGSCTTCEEEECSSSCHHHHHHHHHH-TTCTTS
T ss_pred ecchHHHhcCCCEEEEecCCCCCcHHHH-HHHHhhCcCCCEEecccCCCHHHHHHHHHH-hCcccC
Confidence 4466788999999999999988888877 78889999999999984333222 222332 555555
No 185
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=46.72 E-value=27 Score=27.63 Aligned_cols=63 Identities=13% Similarity=0.148 Sum_probs=40.9
Q ss_pred ccCHHHHhccCCEEEEccCCCC----------CCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCcceE
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTK----------DTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGA 108 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~----------~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~ 108 (180)
..++.+.++++|+|+...|... .+...++.+.+.+++++..+. .+ +|..++.+++.+..+...
T Consensus 51 ~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~----~g-~~~~d~~~~~~~~gi~v~ 123 (300)
T 2rir_A 51 CNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF----SG-ISNAYLENIAAQAKRKLV 123 (300)
T ss_dssp CCGGGSCGGGCSEEECCSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE----ES-SCCHHHHHHHHHTTCCEE
T ss_pred ccchHHHHhcCCEEEeccccccCCcccccccccCCccchHHHHhhcCCCCEEE----Ee-cCCHHHHHHHHHCCCEEE
Confidence 4457788899999997555332 344458899999999877766 22 355664444444455443
No 186
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=45.51 E-value=14 Score=29.19 Aligned_cols=59 Identities=7% Similarity=0.085 Sum_probs=34.9
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCc-ceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHh
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTE-QLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLR 101 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~-glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~ 101 (180)
...++++.++.||+|++++|-..+.. .++ .+....++++++++....+ +....+.+.+.
T Consensus 90 ~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~-~~l~~~~~~~~iv~s~ts~--i~~~~l~~~~~ 149 (302)
T 1f0y_A 90 TSTDAASVVHSTDLVVEAIVENLKVKNELF-KRLDKFAAEHTIFASNTSS--LQITSIANATT 149 (302)
T ss_dssp EESCHHHHTTSCSEEEECCCSCHHHHHHHH-HHHTTTSCTTCEEEECCSS--SCHHHHHTTSS
T ss_pred EecCHHHhhcCCCEEEEcCcCcHHHHHHHH-HHHHhhCCCCeEEEECCCC--CCHHHHHHhcC
Confidence 35678888999999999998543211 222 2222347778877743333 33445555443
No 187
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=45.28 E-value=72 Score=26.41 Aligned_cols=62 Identities=10% Similarity=0.098 Sum_probs=39.9
Q ss_pred ccCHHHHhccCCEEEEccCCCC-CCcceeC--------HhHHhccCCCcEEEecCCCCccCHHHHHHHHhcC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTK-DTEQLIG--------RKQFSLMKPTAILINTSRGGLLDQEALVEFLRDK 103 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~-~T~glIg--------~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~ 103 (180)
..++.+.++.||+|++++|-.. ...+..+ ..... ++++.++|..+--..-..+.+.+.+.+.
T Consensus 64 t~~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 64 TLDSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp ESCHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred eCCHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 4567888899999999999652 1122222 22233 8889999975554444466677766554
No 188
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=43.22 E-value=19 Score=30.54 Aligned_cols=58 Identities=9% Similarity=0.006 Sum_probs=42.1
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCc
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKI 105 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i 105 (180)
..+|+|.++.+|++.=. .+-|++.++.+++|+++.+++..+... .|..-+++.+.|..
T Consensus 249 ~~~L~eav~~ADV~IG~-----Sapgl~T~EmVk~Ma~~pIIfalsNPt--~E~~pe~a~~~g~~ 306 (398)
T 2a9f_A 249 SGTLEDALEGADIFIGV-----SAPGVLKAEWISKMAARPVIFAMANPI--PEIYPDEALEAGAY 306 (398)
T ss_dssp CCSCSHHHHTTCSEEEC-----CSTTCCCHHHHHTSCSSCEEEECCSSS--CSSCHHHHHTTTCS
T ss_pred hhhHHHHhccCCEEEec-----CCCCCCCHHHHHhhCCCCEEEECCCCC--ccCCHHHHHHhCCe
Confidence 45699999999987544 246999999999999999999988753 22223334444663
No 189
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=42.89 E-value=35 Score=29.00 Aligned_cols=61 Identities=8% Similarity=0.178 Sum_probs=41.4
Q ss_pred eeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCC
Q psy5266 21 VCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG 89 (180)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~ 89 (180)
|..+..|||..... ....++++.++.||.|++..+... +.-++...+.+|+ ..+++.. |+-
T Consensus 349 g~~V~~~DP~~~~~----~~~~~~~~~~~~ad~vvi~t~~~~--f~~~d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 349 DIEVCAYDPHVELD----FVEHDMSHAVKDASLVLILSDHSE--FKNLSDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp TCEEEEECSSCCCT----TBCSTTHHHHTTCSEEEECSCCGG--GTSCCGGGGTTCS-SCEEEES-SCC
T ss_pred CCEEEEECCCcccc----cccCCHHHHHhCCCEEEEecCCHH--HhccCHHHHHhCC-CCEEEEC-CCC
Confidence 77888999987642 345678999999999999987542 2234566666676 4455553 443
No 190
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=42.66 E-value=43 Score=28.32 Aligned_cols=62 Identities=11% Similarity=0.121 Sum_probs=45.1
Q ss_pred CHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEeecCC
Q psy5266 43 VIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLDVMI 114 (180)
Q Consensus 43 ~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~ 114 (180)
+-++++++||+|.---+.. .+.+..||+|.+++..-.-. ...++.+.|.++.+...+++...
T Consensus 83 ~~~~~~~~adiIlkVk~p~--------~~e~~~l~~g~~l~~~lh~~--~~~~l~~~l~~~~it~ia~E~i~ 144 (405)
T 4dio_A 83 GTAADAKTADVILKVRRPS--------AQEISGYRSGAVVIAIMDPY--GNEEAISAMAGAGLTTFAMELMP 144 (405)
T ss_dssp ECGGGGGGCSEEEEEECCC--------TTTGGGSCTTCEEEEECCCT--TCHHHHHHHHHTTCEEEEGGGSC
T ss_pred chHHhhccCCEEEEeCCCC--------hhHHhhcCCCcEEEEEeccc--cCHHHHHHHHHCCCeEEEeeccc
Confidence 4568899999987533322 24578899999999775443 25678888888899888888764
No 191
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=42.43 E-value=34 Score=27.58 Aligned_cols=39 Identities=8% Similarity=0.112 Sum_probs=30.2
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTS 86 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~ 86 (180)
..++++++ ++|+|+++.|.. ..++.. ..+++|..++.++
T Consensus 179 ~~~~~e~v-~aDvVi~aTp~~---~pv~~~---~~l~~G~~V~~ig 217 (322)
T 1omo_A 179 VQPAEEAS-RCDVLVTTTPSR---KPVVKA---EWVEEGTHINAIG 217 (322)
T ss_dssp ECCHHHHT-SSSEEEECCCCS---SCCBCG---GGCCTTCEEEECS
T ss_pred ECCHHHHh-CCCEEEEeeCCC---CceecH---HHcCCCeEEEECC
Confidence 67899999 999999999953 345543 4678898888773
No 192
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=42.15 E-value=47 Score=26.02 Aligned_cols=79 Identities=10% Similarity=0.125 Sum_probs=48.8
Q ss_pred EEEeccccccCC---cc--ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhc-cCCCcEEEecCCCCccCHHHH
Q psy5266 23 VLIRYHVDLTGG---SK--QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSL-MKPTAILINTSRGGLLDQEAL 96 (180)
Q Consensus 23 ~~~~~~~~~~~~---~~--~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~-mk~g~~lvn~~Rg~~vd~~al 96 (180)
.+..||++.... .+ +.....+..+.+++||+|++++|- .....++. +.-.. ++++.++|.+.-| +..+.+
T Consensus 31 ~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl~-~l~~~~l~~~~iiiS~~ag--i~~~~l 106 (280)
T 3tri_A 31 RICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVCE-ELKDILSETKILVISLAVG--VTTPLI 106 (280)
T ss_dssp GEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHHH-HHHHHHHTTTCEEEECCTT--CCHHHH
T ss_pred eEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHHH-HHHhhccCCCeEEEEecCC--CCHHHH
Confidence 456676654321 11 234456899999999999999973 23333332 22223 6778788876554 346778
Q ss_pred HHHHhc-CCc
Q psy5266 97 VEFLRD-KKI 105 (180)
Q Consensus 97 ~~~L~~-~~i 105 (180)
.+.+.. .++
T Consensus 107 ~~~l~~~~~v 116 (280)
T 3tri_A 107 EKWLGKASRI 116 (280)
T ss_dssp HHHHTCCSSE
T ss_pred HHHcCCCCeE
Confidence 888876 344
No 193
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=41.22 E-value=40 Score=27.27 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=33.0
Q ss_pred ccCCEEEEccCCCCCCcceeCHh----------HH-------hccCCCcEEEecCCCCccCHHHHHHHHhcCC
Q psy5266 49 AQSDFIFVTCALTKDTEQLIGRK----------QF-------SLMKPTAILINTSRGGLLDQEALVEFLRDKK 104 (180)
Q Consensus 49 ~~~D~v~~h~pl~~~T~glIg~~----------~i-------~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~ 104 (180)
..+|+|++|+|+|.. |+||.+ .+ .+.+++. ++-+.-|++...+++..+++..+
T Consensus 182 agpDiI~~h~glT~g--glIG~~~avs~~~~~e~i~~i~~a~~~vnpdv-ivLc~gGpIstpeDv~~~l~~t~ 251 (286)
T 2p10_A 182 AGADILVCHMGLTTG--GAIGARSGKSMDDCVSLINECIEAARTIRDDI-IILSHGGPIANPEDARFILDSCQ 251 (286)
T ss_dssp HTCSEEEEECSCC-----------CCCHHHHHHHHHHHHHHHHHHCSCC-EEEEESTTCCSHHHHHHHHHHCT
T ss_pred cCCCEEEECCCCCCC--CcccCCCcccHHHhHHHHHHHHHHHHHhCCCc-EEEecCCCCCCHHHHHHHHhcCC
Confidence 389999999998843 555544 11 1255564 44455568889999999998854
No 194
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=39.01 E-value=1.3e+02 Score=24.14 Aligned_cols=75 Identities=5% Similarity=0.035 Sum_probs=49.3
Q ss_pred eeeEEEeccccccCCccc------eeeccCHHHHhccCCEEEEccC-CCC-----C------CcceeCHhHHhccCCCcE
Q psy5266 20 IVCVLIRYHVDLTGGSKQ------VYLILVIRTRSAQSDFIFVTCA-LTK-----D------TEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~------~~~~~~l~~l~~~~D~v~~h~p-l~~-----~------T~glIg~~~i~~mk~g~~ 81 (180)
||+.+....|.-....+. +....+++|.++.+|+|..-.= ..+ . ..-.++.+.++++|++++
T Consensus 177 ~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai 256 (301)
T 2ef0_A 177 AGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGV 256 (301)
T ss_dssp HTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCE
T ss_pred cCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcE
Confidence 566666666655543332 3346789999999999977332 111 0 234578999999999999
Q ss_pred EEecC---CCCccCHH
Q psy5266 82 LINTS---RGGLLDQE 94 (180)
Q Consensus 82 lvn~~---Rg~~vd~~ 94 (180)
+.-+. ||.-|+.+
T Consensus 257 ~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 257 FLHCLPAHYGEETTEE 272 (301)
T ss_dssp EEECSCCCBTTTBCHH
T ss_pred EECCCCCCCCCccCHH
Confidence 98774 66555544
No 195
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=38.09 E-value=27 Score=26.51 Aligned_cols=86 Identities=15% Similarity=0.114 Sum_probs=51.6
Q ss_pred cCCccccce--e---eeEE-EeccccccCCccceeeccCHHHHh-ccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEE
Q psy5266 11 TGTPGQVHL--I---VCVL-IRYHVDLTGGSKQVYLILVIRTRS-AQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILI 83 (180)
Q Consensus 11 ~G~iG~~~~--~---~~~~-~~~~~~~~~~~~~~~~~~~l~~l~-~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lv 83 (180)
.|++|+.|. + +..+ ..||++.. .+. .+.++++++ .++|+|++++|-. ... .-....++.|..++
T Consensus 8 ~G~mG~~~~~~l~~~g~~lv~v~d~~~~--~~~--~~~~~~~l~~~~~DvVv~~~~~~-~~~----~~~~~~l~~G~~vv 78 (236)
T 2dc1_A 8 YGAIGKFLAEWLERNGFEIAAILDVRGE--HEK--MVRGIDEFLQREMDVAVEAASQQ-AVK----DYAEKILKAGIDLI 78 (236)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECSSCC--CTT--EESSHHHHTTSCCSEEEECSCHH-HHH----HHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHhcCCCEEEEEEecCcc--hhh--hcCCHHHHhcCCCCEEEECCCHH-HHH----HHHHHHHHCCCcEE
Confidence 477777631 0 2233 35665532 111 567899999 7999999999832 111 11134477788888
Q ss_pred ecCCCCccCH---HHHHHHHhcCCc
Q psy5266 84 NTSRGGLLDQ---EALVEFLRDKKI 105 (180)
Q Consensus 84 n~~Rg~~vd~---~al~~~L~~~~i 105 (180)
..+-+..-+. ..+.+..++..+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~a~~~g~ 103 (236)
T 2dc1_A 79 VLSTGAFADRDFLSRVREVCRKTGR 103 (236)
T ss_dssp ESCGGGGGSHHHHHHHHHHHHHHCC
T ss_pred EECcccCChHHHHHHHHHHHHhcCC
Confidence 8877655444 466666665444
No 196
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=36.64 E-value=97 Score=24.03 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=38.9
Q ss_pred eccCHHHHhccCCEEEEccCCC--CCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcC
Q psy5266 40 LILVIRTRSAQSDFIFVTCALT--KDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDK 103 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~--~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~ 103 (180)
...++++.++++|+|+.+.|.. ++ .-.+..+. ++++.+++...-+ ...-+.++.+.|
T Consensus 156 ~~~~~~~~~~~aDiVInatp~gm~p~-~~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 156 SLDQLDEVVKKAKSLFNTTSVGMKGE-ELPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp EGGGHHHHHHTCSEEEECSSTTTTSC-CCSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CHHHHHhhhcCCCEEEECCCCCCCCC-CCCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 5677889999999999999964 32 23344433 5678888888766 455555555554
No 197
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=36.43 E-value=1.7e+02 Score=23.79 Aligned_cols=65 Identities=12% Similarity=0.102 Sum_probs=39.5
Q ss_pred eeeEEEeccccccCCcc----ceeeccCHHHHhccCCEEEEccC-CCC----------CCcceeCHhHHhccCCCcEEEe
Q psy5266 20 IVCVLIRYHVDLTGGSK----QVYLILVIRTRSAQSDFIFVTCA-LTK----------DTEQLIGRKQFSLMKPTAILIN 84 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~~----~~~~~~~l~~l~~~~D~v~~h~p-l~~----------~T~glIg~~~i~~mk~g~~lvn 84 (180)
||+.+....|.-....+ .+....+++|.++.+|+|..-.= ..+ ...-.++.+.++++| ++++.-
T Consensus 195 ~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~-~ai~MH 273 (324)
T 1js1_X 195 TDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN-NAYFMH 273 (324)
T ss_dssp SSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS-SCEEEC
T ss_pred CCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC-CcEEEC
Confidence 56666666665544333 23457889999999999977322 111 112445666666666 666665
Q ss_pred c
Q psy5266 85 T 85 (180)
Q Consensus 85 ~ 85 (180)
+
T Consensus 274 c 274 (324)
T 1js1_X 274 C 274 (324)
T ss_dssp C
T ss_pred C
Confidence 4
No 198
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=36.37 E-value=62 Score=26.61 Aligned_cols=65 Identities=17% Similarity=0.222 Sum_probs=40.1
Q ss_pred ccCHHHHhccCCEEEEc-cCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCcceEEee
Q psy5266 41 ILVIRTRSAQSDFIFVT-CALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKIGGAGLD 111 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h-~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~~~~lD 111 (180)
..+.++++++||+|... .|++. .+..+.+.+|+++..++....... +...+. ++.+..+...+.+
T Consensus 58 ~~~~~~~~~~adiil~v~~p~~~----~~~~~~i~~l~~~~~~i~~~~~~~-~~~~~~-~~~~~gi~~~~~e 123 (384)
T 1l7d_A 58 ASTAAQALSQADVVWKVQRPMTA----EEGTDEVALIKEGAVLMCHLGALT-NRPVVE-ALTKRKITAYAME 123 (384)
T ss_dssp ESSHHHHHSSCSEEEEEECCCCG----GGSCCGGGGSCTTCEEEEECCGGG-CHHHHH-HHHHTTCEEEEGG
T ss_pred ecChhhhhcCCCEEEEecCcccc----cCCHHHHHhhccCCEEEEEecccC-CHHHHH-HHHHCCCEEEEec
Confidence 44668999999998754 23221 225677888999888885544432 444444 4555556555443
No 199
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=35.41 E-value=28 Score=27.55 Aligned_cols=57 Identities=5% Similarity=0.020 Sum_probs=37.2
Q ss_pred CHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCC---c-cCHHHHHHHHhc
Q psy5266 43 VIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG---L-LDQEALVEFLRD 102 (180)
Q Consensus 43 ~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~---~-vd~~al~~~L~~ 102 (180)
++++.++.+|+|++++|-. .+..++ ..... ++++.++|....|- - -..+.+.+.+.+
T Consensus 64 ~~~~~~~~~D~vi~~v~~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 64 QLEKCLENAEVVLLGVSTD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GHHHHHTTCSEEEECSCGG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hHHHHHhcCCEEEEcCChH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 7888899999999999954 333333 22334 77788888876653 1 122446666654
No 200
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=34.77 E-value=1.7e+02 Score=23.81 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=37.2
Q ss_pred eeccCHHHHhccCCEEEEccC-CCC------C-----CcceeCHhHHhccCCCcEEEec---CCCCccCHH
Q psy5266 39 YLILVIRTRSAQSDFIFVTCA-LTK------D-----TEQLIGRKQFSLMKPTAILINT---SRGGLLDQE 94 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~p-l~~------~-----T~glIg~~~i~~mk~g~~lvn~---~Rg~~vd~~ 94 (180)
....+++|.++.+|+|..-.= ... + ..-.++.+.++++|+++++.-+ .||.-|+.+
T Consensus 214 ~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~e 284 (323)
T 3gd5_A 214 QILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDE 284 (323)
T ss_dssp EEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCHH
Confidence 456789999999999965421 111 1 1235788888889988888765 366544433
No 201
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=34.12 E-value=4.4 Score=32.78 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=54.1
Q ss_pred cCCccccc---e-eeeEEEeccccccCCc----c-------ceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhc
Q psy5266 11 TGTPGQVH---L-IVCVLIRYHVDLTGGS----K-------QVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSL 75 (180)
Q Consensus 11 ~G~iG~~~---~-~~~~~~~~~~~~~~~~----~-------~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~ 75 (180)
.|.+|... + -|..+..||.+..... . ......++++ +++||+|+.++|-..+....+= +.+..
T Consensus 20 ~G~MG~~iA~~laaG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~~l~-~~l~~ 97 (293)
T 1zej_A 20 AGLMGRGIAIAIASKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKVEVL-REVER 97 (293)
T ss_dssp CSHHHHHHHHHHHTTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHHHHH-HHHHT
T ss_pred eCHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHHHHH-HHHhc
Confidence 46666641 1 1345667776654211 1 2334567777 8999999999997754333221 23666
Q ss_pred cCCCcEEE-ecCCCCccCHHHHHHHHhcCCcceEEeecCC
Q psy5266 76 MKPTAILI-NTSRGGLLDQEALVEFLRDKKIGGAGLDVMI 114 (180)
Q Consensus 76 mk~g~~lv-n~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~ 114 (180)
+ ++++++ |++- ++...+.+.++. .....++-.+.
T Consensus 98 ~-~~~IlasntSt---i~~~~~a~~~~~-~~r~~G~Hf~~ 132 (293)
T 1zej_A 98 L-TNAPLCSNTSV---ISVDDIAERLDS-PSRFLGVHWMN 132 (293)
T ss_dssp T-CCSCEEECCSS---SCHHHHHTTSSC-GGGEEEEEECS
T ss_pred C-CCCEEEEECCC---cCHHHHHHHhhc-ccceEeEEecC
Confidence 7 888884 7655 334444444432 22355555654
No 202
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=33.87 E-value=17 Score=29.70 Aligned_cols=47 Identities=11% Similarity=0.123 Sum_probs=32.6
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcceeCHhHHh----ccCCCcEEEecCCC
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFS----LMKPTAILINTSRG 88 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~----~mk~g~~lvn~~Rg 88 (180)
...++++.++.||+|++++|- .....++. +... .++++.++|.+..|
T Consensus 93 ~~~~~~ea~~~aDvVilav~~-~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 93 AHSDLASVINDADLLIFIVPC-QYLESVLA-SIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp EESSTHHHHTTCSEEEECCCH-HHHHHHHH-HHTC---CCCCTTCEEEECCCS
T ss_pred EECCHHHHHcCCCEEEEcCCH-HHHHHHHH-HHhhhhhccCCCCCEEEEeCCc
Confidence 345788889999999999994 33333332 2223 56778899988766
No 203
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=33.69 E-value=1.9e+02 Score=23.39 Aligned_cols=75 Identities=9% Similarity=0.091 Sum_probs=47.5
Q ss_pred eeeEEEeccccccCCcc---------------ceeeccCHHHHhccCCEEEEccCC-CCC-----------CcceeCHhH
Q psy5266 20 IVCVLIRYHVDLTGGSK---------------QVYLILVIRTRSAQSDFIFVTCAL-TKD-----------TEQLIGRKQ 72 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~l~~~~D~v~~h~pl-~~~-----------T~glIg~~~ 72 (180)
||+.+....|.-..+.+ .+....+++|.++.+|+|..-.=- .++ ..-.++.+.
T Consensus 178 ~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~el 257 (315)
T 1pvv_A 178 LGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDL 257 (315)
T ss_dssp TTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHH
T ss_pred CCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHH
Confidence 56666666665443322 133467899999999999773321 111 124578888
Q ss_pred HhccCCCcEEEecC---CCCccCHH
Q psy5266 73 FSLMKPTAILINTS---RGGLLDQE 94 (180)
Q Consensus 73 i~~mk~g~~lvn~~---Rg~~vd~~ 94 (180)
++++|+++++.-+- ||.-|+.+
T Consensus 258 l~~a~~~ai~mH~lP~~Rg~EI~~e 282 (315)
T 1pvv_A 258 VKHAKPDYMFMHCLPAHRGEEVTDD 282 (315)
T ss_dssp HHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred HhhcCCCcEEECCCCCCCCCccCHH
Confidence 88899888888763 56544433
No 204
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=32.00 E-value=2e+02 Score=23.16 Aligned_cols=74 Identities=12% Similarity=0.058 Sum_probs=46.0
Q ss_pred eeeEEEeccccccCCcc---------------ceeeccCHHHHhccCCEEEEccC-CCC------C-----CcceeCHhH
Q psy5266 20 IVCVLIRYHVDLTGGSK---------------QVYLILVIRTRSAQSDFIFVTCA-LTK------D-----TEQLIGRKQ 72 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~l~~~~D~v~~h~p-l~~------~-----T~glIg~~~ 72 (180)
||+.+....|.-..+.+ .+....+++|.++.+|+|..-.= ..+ + ..-.++.+.
T Consensus 172 ~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~ 251 (307)
T 2i6u_A 172 AGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRL 251 (307)
T ss_dssp TTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHH
T ss_pred CCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHHH
Confidence 56666666665443332 13346789999999999987332 111 1 124578888
Q ss_pred HhccCCCcEEEecC---CCCccCH
Q psy5266 73 FSLMKPTAILINTS---RGGLLDQ 93 (180)
Q Consensus 73 i~~mk~g~~lvn~~---Rg~~vd~ 93 (180)
++++|+++++.-+. ||.-|+.
T Consensus 252 l~~a~~~ai~mH~lP~~Rg~EI~~ 275 (307)
T 2i6u_A 252 LALADSDAIVLHCLPAHRGDEITD 275 (307)
T ss_dssp HHHSCTTCEEEECSCCCBTTTBCH
T ss_pred HhhcCCCcEEECCCCCCCCcccCH
Confidence 88888888887662 5544443
No 205
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=30.73 E-value=62 Score=27.77 Aligned_cols=20 Identities=20% Similarity=0.169 Sum_probs=17.0
Q ss_pred eeccCHHHHhccCCEEEEcc
Q psy5266 39 YLILVIRTRSAQSDFIFVTC 58 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~ 58 (180)
....+.++.++.||||++..
T Consensus 65 ~~t~d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 65 VKTESLDEAIEGADFIINTA 84 (477)
T ss_dssp EEESCHHHHHTTCSEEEECC
T ss_pred EEeCCHHHHhCCCCEEEECc
Confidence 44678999999999999875
No 206
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=30.63 E-value=4 Score=33.03 Aligned_cols=42 Identities=10% Similarity=0.217 Sum_probs=29.4
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccC-CCcEEEecCCC
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMK-PTAILINTSRG 88 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk-~g~~lvn~~Rg 88 (180)
...+.++ ++.+|+|++++| ...+..++ ..++ ++..+|.+.-|
T Consensus 71 ~~~~~~~-~~~aDvVil~vk-~~~~~~v~-----~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 71 ATNDLEE-IKKEDILVIAIP-VQYIREHL-----LRLPVKPSMVLNLSKG 113 (335)
T ss_dssp EESCGGG-CCTTEEEEECSC-GGGHHHHH-----TTCSSCCSEEEECCCC
T ss_pred EeCCHHH-hcCCCEEEEECC-HHHHHHHH-----HHhCcCCCEEEEEeCC
Confidence 3457778 889999999999 44444443 2343 68888888765
No 207
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=29.07 E-value=42 Score=27.76 Aligned_cols=38 Identities=11% Similarity=0.050 Sum_probs=27.8
Q ss_pred CHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCC
Q psy5266 43 VIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSR 87 (180)
Q Consensus 43 ~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~R 87 (180)
+.++++.++|++++++| +-...+...++ .|+++|..+-
T Consensus 71 ~~~~~~~~~Dvvf~alp------~~~s~~~~~~~-~g~~VIDlSs 108 (351)
T 1vkn_A 71 DPEKVSKNCDVLFTALP------AGASYDLVREL-KGVKIIDLGA 108 (351)
T ss_dssp CHHHHHHHCSEEEECCS------TTHHHHHHTTC-CSCEEEESSS
T ss_pred CHHHhhcCCCEEEECCC------cHHHHHHHHHh-CCCEEEECCh
Confidence 56677789999999999 44455566666 6788887653
No 208
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=27.02 E-value=2.4e+02 Score=23.18 Aligned_cols=55 Identities=13% Similarity=0.145 Sum_probs=36.5
Q ss_pred eeccCHHHHhccCCEEEEccCCC-CC----------CcceeCHhHHhccCCCcEEEecC---CCCccCH
Q psy5266 39 YLILVIRTRSAQSDFIFVTCALT-KD----------TEQLIGRKQFSLMKPTAILINTS---RGGLLDQ 93 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~pl~-~~----------T~glIg~~~i~~mk~g~~lvn~~---Rg~~vd~ 93 (180)
....+++|.++.+|+|..-.=-. .. ..-.++.+.++++|+++++.-+- ||.-|+.
T Consensus 236 ~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~ 304 (340)
T 4ep1_A 236 EILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTG 304 (340)
T ss_dssp EEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCH
T ss_pred EEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCH
Confidence 34678999999999997643211 10 12357888888888888887663 6654443
No 209
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=26.74 E-value=1.7e+02 Score=23.43 Aligned_cols=66 Identities=14% Similarity=0.080 Sum_probs=40.6
Q ss_pred eeEEEeccccccCCcc--------ceeeccCHHHHhccCCEEEEccCCCCC-----------CcceeCHhHHhccCCCcE
Q psy5266 21 VCVLIRYHVDLTGGSK--------QVYLILVIRTRSAQSDFIFVTCALTKD-----------TEQLIGRKQFSLMKPTAI 81 (180)
Q Consensus 21 ~~~~~~~~~~~~~~~~--------~~~~~~~l~~l~~~~D~v~~h~pl~~~-----------T~glIg~~~i~~mk~g~~ 81 (180)
|+.+....|.-..+.+ .+....+++|.++.+|+|..-.=-... ..-.++.+.++++|++++
T Consensus 176 g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai 255 (299)
T 1pg5_A 176 PKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSI 255 (299)
T ss_dssp CSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCE
T ss_pred CCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCE
Confidence 6666666665443322 123457899999999999764321111 024467777777777777
Q ss_pred EEecC
Q psy5266 82 LINTS 86 (180)
Q Consensus 82 lvn~~ 86 (180)
+.-+-
T Consensus 256 ~mH~l 260 (299)
T 1pg5_A 256 ILHPL 260 (299)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 77663
No 210
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=26.48 E-value=94 Score=26.71 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=30.0
Q ss_pred HHHhccCCEEEEccCCCCCCcc--------eeC--HhHHhccCCCcEEEecCCC
Q psy5266 45 RTRSAQSDFIFVTCALTKDTEQ--------LIG--RKQFSLMKPTAILINTSRG 88 (180)
Q Consensus 45 ~~l~~~~D~v~~h~pl~~~T~g--------lIg--~~~i~~mk~g~~lvn~~Rg 88 (180)
.+.++.||+|++++|-.....+ +.. .+....+++|.++|+.+--
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 149 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTI 149 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCC
Confidence 6788999999999996533222 111 2334459999999988643
No 211
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=25.78 E-value=2.5e+02 Score=22.87 Aligned_cols=55 Identities=13% Similarity=0.231 Sum_probs=36.6
Q ss_pred eeccCHHHHhccCCEEEEcc--CCC--CC---------CcceeCHhHHhccCCCcEEEec---CCCCccCH
Q psy5266 39 YLILVIRTRSAQSDFIFVTC--ALT--KD---------TEQLIGRKQFSLMKPTAILINT---SRGGLLDQ 93 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~--pl~--~~---------T~glIg~~~i~~mk~g~~lvn~---~Rg~~vd~ 93 (180)
....+++|.++.+|+|..-+ .+. .+ ..-.++.+.++++|+++++.-+ .||.-|+.
T Consensus 223 ~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~ 293 (328)
T 3grf_A 223 KIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTA 293 (328)
T ss_dssp EEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCH
T ss_pred EEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCH
Confidence 45679999999999997531 111 11 1244788889999999888866 36654443
No 212
>1wn4_A Vontr protein; helix, plant protein; NMR {Synthetic} SCOP: j.113.1.1
Probab=25.19 E-value=35 Score=17.46 Aligned_cols=19 Identities=42% Similarity=0.644 Sum_probs=14.9
Q ss_pred ccCHHHHHHHHHccccccc
Q psy5266 134 LLDQEALVEFLRDKKIGGA 152 (180)
Q Consensus 134 ~~~~~al~~~L~~g~l~ga 152 (180)
.+-+||++.+.++|.++|.
T Consensus 9 plLEEALv~~ak~~~LGG~ 27 (28)
T 1wn4_A 9 HLLEEALVAFAKKGNLGGL 27 (28)
T ss_dssp HHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHhhcCCCCC
Confidence 4457999999999888764
No 213
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=24.95 E-value=89 Score=21.76 Aligned_cols=77 Identities=9% Similarity=0.044 Sum_probs=44.9
Q ss_pred EEEeccccccC-CccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHh
Q psy5266 23 VLIRYHVDLTG-GSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLR 101 (180)
Q Consensus 23 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~ 101 (180)
+++..+++..+ ...+..-+.+++|+-...|++++.+|- +....++.. +.......++++ +.. . ++++.+..+
T Consensus 42 ~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~~--~~~~gi~~i~~~-~g~--~-~~~~~~~a~ 114 (140)
T 1iuk_A 42 RVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLPE--VLALRPGLVWLQ-SGI--R-HPEFEKALK 114 (140)
T ss_dssp EEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHHH--HHHHCCSCEEEC-TTC--C-CHHHHHHHH
T ss_pred EEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHHH--HHHcCCCEEEEc-CCc--C-HHHHHHHHH
Confidence 45555555211 223445567899999899999999996 455566632 222333344443 222 2 466777777
Q ss_pred cCCcc
Q psy5266 102 DKKIG 106 (180)
Q Consensus 102 ~~~i~ 106 (180)
+..+.
T Consensus 115 ~~Gir 119 (140)
T 1iuk_A 115 EAGIP 119 (140)
T ss_dssp HTTCC
T ss_pred HcCCE
Confidence 76654
No 214
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=24.87 E-value=1.9e+02 Score=23.36 Aligned_cols=67 Identities=12% Similarity=0.056 Sum_probs=41.7
Q ss_pred eeeEEEeccccccCCcc-----------ceeeccCHHHHhccCCEEEEccCCC---C--------CCcceeCHhHHhccC
Q psy5266 20 IVCVLIRYHVDLTGGSK-----------QVYLILVIRTRSAQSDFIFVTCALT---K--------DTEQLIGRKQFSLMK 77 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~l~~~~D~v~~h~pl~---~--------~T~glIg~~~i~~mk 77 (180)
||+.+....|.-..+.+ .+....+++|.++.+|+|..-.=-. + ...-.++.+.++++|
T Consensus 180 ~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~ 259 (308)
T 1ml4_A 180 YDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAK 259 (308)
T ss_dssp SCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSC
T ss_pred CCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcC
Confidence 57777666665554332 1234578999999999997743211 0 012346777777777
Q ss_pred CCcEEEecC
Q psy5266 78 PTAILINTS 86 (180)
Q Consensus 78 ~g~~lvn~~ 86 (180)
+++++.-+-
T Consensus 260 ~~ai~mH~l 268 (308)
T 1ml4_A 260 DELRIMHPL 268 (308)
T ss_dssp TTCEEECCS
T ss_pred CCCEEECCC
Confidence 777777653
No 215
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=24.78 E-value=2.8e+02 Score=22.51 Aligned_cols=75 Identities=11% Similarity=0.157 Sum_probs=46.8
Q ss_pred eeeEEEeccccccCCcc---------------ceeeccCHHHHhccCCEEEEccCC-C------CC-----CcceeCHhH
Q psy5266 20 IVCVLIRYHVDLTGGSK---------------QVYLILVIRTRSAQSDFIFVTCAL-T------KD-----TEQLIGRKQ 72 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~l~~~~D~v~~h~pl-~------~~-----T~glIg~~~ 72 (180)
||+.+....|.-..+.+ .+....+++|.++.+|+|..-.=- . ++ ..-.++.+.
T Consensus 191 ~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~el 270 (325)
T 1vlv_A 191 MGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERV 270 (325)
T ss_dssp TTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHH
T ss_pred CCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHH
Confidence 56666666655443322 133467899999999999773221 1 11 235578888
Q ss_pred Hhcc-CCCcEEEec---CCCCccCHH
Q psy5266 73 FSLM-KPTAILINT---SRGGLLDQE 94 (180)
Q Consensus 73 i~~m-k~g~~lvn~---~Rg~~vd~~ 94 (180)
++++ |+++++.-+ .||.-|+.+
T Consensus 271 l~~a~k~dai~mH~LP~~Rg~EI~~e 296 (325)
T 1vlv_A 271 MEMTGKSETIFMHCLPAVKGQEVTYE 296 (325)
T ss_dssp HHTTCCTTCEEEECSCCCBTTTBCHH
T ss_pred HHhccCCCeEEECCCCCCCCcccCHH
Confidence 8888 888888866 356545443
No 216
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=24.20 E-value=2.8e+02 Score=22.29 Aligned_cols=56 Identities=20% Similarity=0.187 Sum_probs=37.6
Q ss_pred eeccCHHHHhccCCEEEEcc--CCCC----------CCcceeCHhHHhccCCCcEEEec---CCCCccCHH
Q psy5266 39 YLILVIRTRSAQSDFIFVTC--ALTK----------DTEQLIGRKQFSLMKPTAILINT---SRGGLLDQE 94 (180)
Q Consensus 39 ~~~~~l~~l~~~~D~v~~h~--pl~~----------~T~glIg~~~i~~mk~g~~lvn~---~Rg~~vd~~ 94 (180)
....+++|.++.+|+|..-. .... ...-.++.+.++++|+++++.-+ .||.-|+.+
T Consensus 203 ~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 203 SLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp EEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 35678999999999997654 1111 01245788888888888888766 366555433
No 217
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=23.67 E-value=26 Score=27.28 Aligned_cols=42 Identities=12% Similarity=0.117 Sum_probs=26.6
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhcc-CCCcEEEecCCC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLM-KPTAILINTSRG 88 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~m-k~g~~lvn~~Rg 88 (180)
..++++++++||+|++++|-.. . .+.+..+ +++.++++++-+
T Consensus 49 ~~~~~~~~~~~DvVilav~~~~-~-----~~v~~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 49 AATLEKHPELNGVVFVIVPDRY-I-----KTVANHLNLGDAVLVHCSGF 91 (276)
T ss_dssp CCSSCCCCC---CEEECSCTTT-H-----HHHHTTTCCSSCCEEECCSS
T ss_pred cCCHHHHHhcCCEEEEeCChHH-H-----HHHHHHhccCCCEEEECCCC
Confidence 4567788889999999999542 2 3344444 468889988743
No 218
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=23.48 E-value=48 Score=28.19 Aligned_cols=40 Identities=10% Similarity=0.043 Sum_probs=28.7
Q ss_pred eeeEEEeccccccCCc-cceeeccCHHHHhccCCEEEEccC
Q psy5266 20 IVCVLIRYHVDLTGGS-KQVYLILVIRTRSAQSDFIFVTCA 59 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~D~v~~h~p 59 (180)
.|..+..|||...... .+.....++++.++.||+|+++..
T Consensus 364 ~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~aD~iv~~~~ 404 (432)
T 3pid_A 364 KGIPVIIYEPVMQEDEFFNSRVVRDLNAFKQEADVIISNRM 404 (432)
T ss_dssp TTCCEEEECTTCCSSEETTEEECCCHHHHHHHCSEEECSSC
T ss_pred cCCEEEEECCCCChhhcCCceEECCHHHHHhcCCEEEECCC
Confidence 3677889999886421 122245789999999999987754
No 219
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=22.85 E-value=71 Score=27.57 Aligned_cols=21 Identities=14% Similarity=0.248 Sum_probs=17.8
Q ss_pred eccCHHHHhccCCEEEEccCC
Q psy5266 40 LILVIRTRSAQSDFIFVTCAL 60 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl 60 (180)
...++++-++.||+|++.+|.
T Consensus 67 ~ttD~~eal~dAD~VIiaagv 87 (480)
T 1obb_A 67 KTMNLDDVIIDADFVINTAMV 87 (480)
T ss_dssp EESCHHHHHTTCSEEEECCCT
T ss_pred EECCHHHHhCCCCEEEECCCc
Confidence 456888889999999999963
No 220
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=22.76 E-value=81 Score=26.31 Aligned_cols=43 Identities=14% Similarity=0.210 Sum_probs=33.1
Q ss_pred CHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEec
Q psy5266 43 VIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINT 85 (180)
Q Consensus 43 ~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~ 85 (180)
-+.+|+++|||++-+..-.-.-+-=||++.+.+.+|+.+...+
T Consensus 90 ~l~~Lv~~ADV~ienfrPg~~~rlGl~ye~L~~~nP~LIy~si 132 (385)
T 4ed9_A 90 LVRRLVAEADVVIENFKLGGLDKYGLDYESLKAINPQLIYCSI 132 (385)
T ss_dssp HHHHHHHTCSEEEECCCTTTTGGGTCSHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHhCCEEEECCCccHHHHhCCCHHHHHHhCCCeEEEEE
Confidence 4789999999999887533333344689999999998887765
No 221
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=22.21 E-value=36 Score=29.27 Aligned_cols=71 Identities=21% Similarity=0.293 Sum_probs=39.7
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCc-ceeCHhHHhccCCCcEE-EecCCCCccCHHHHHHHHhcCCcceEEeecCCCCC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTE-QLIGRKQFSLMKPTAIL-INTSRGGLLDQEALVEFLRDKKIGGAGLDVMIPEP 117 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~-glIg~~~i~~mk~g~~l-vn~~Rg~~vd~~al~~~L~~~~i~~~~lDv~~~ep 117 (180)
..+++ .+++||+|+.++|-..+.. .++ .+....+++++++ .|++-- +...+.+.++. .-..+.+..+.+.|
T Consensus 76 ~~~~~-~~~~aDlVIeAVpe~~~vk~~v~-~~l~~~~~~~~IlasntSti---~i~~ia~~~~~-p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 76 VTDIH-ALAAADLVIEAASERLEVKKALF-AQLAEVCPPQTLLTTNTSSI---SITAIAAEIKN-PERVAGLHFFNPAP 148 (483)
T ss_dssp ECCGG-GGGGCSEEEECCCCCHHHHHHHH-HHHHHHSCTTCEEEECCSSS---CHHHHTTTSSS-GGGEEEEEECSSTT
T ss_pred eCCHH-HhcCCCEEEEcCCCcHHHHHHHH-HHHHHhhccCcEEEecCCCC---CHHHHHHHccC-ccceEEeeecChhh
Confidence 45565 5889999999999653322 222 2344458888888 455432 33444444432 22345555554333
No 222
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=21.82 E-value=16 Score=29.65 Aligned_cols=49 Identities=6% Similarity=0.097 Sum_probs=33.2
Q ss_pred eccCHHHHhccCCEEEEccCCCCCCcceeCH---hHHhccCC-CcEEEecCCCC
Q psy5266 40 LILVIRTRSAQSDFIFVTCALTKDTEQLIGR---KQFSLMKP-TAILINTSRGG 89 (180)
Q Consensus 40 ~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~---~~i~~mk~-g~~lvn~~Rg~ 89 (180)
...++++.++.+|+|++++|- .....++.. +....+++ +.++|.+..|-
T Consensus 75 ~~~~~~~~~~~aDvVilav~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 75 FTSDVEKAYNGAEIILFVIPT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp EESCHHHHHTTCSSEEECCCH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred eeCCHHHHHcCCCEEEECCCh-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 346788999999999999994 333444422 13344677 88888887653
No 223
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=21.75 E-value=1.5e+02 Score=25.31 Aligned_cols=59 Identities=10% Similarity=-0.057 Sum_probs=40.6
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKK 104 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~ 104 (180)
..+|.+.++.+|+++-..|.. .|++..+.++.|+++.+++..+... .+.-+.++.+.|.
T Consensus 254 ~~~L~e~l~~aDVlInaT~~~---~G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 254 EGGPQEALKDADVLISFTRPG---PGVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp CSSHHHHHTTCSEEEECSCCC---SSSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred cccHHHHhccCCEEEEcCCCc---cCCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 457899999999999887742 2667777888899888888774332 2333444444454
No 224
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=20.54 E-value=54 Score=26.62 Aligned_cols=40 Identities=8% Similarity=0.021 Sum_probs=26.2
Q ss_pred ccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCC-CcEEEecC
Q psy5266 41 ILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKP-TAILINTS 86 (180)
Q Consensus 41 ~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~-g~~lvn~~ 86 (180)
..+|+++++++|+|+.++|-. ++...++.|-. |+.++..+
T Consensus 68 ~~~l~~~~~~~DvVi~~~p~~------~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 68 FDKLVEVMKEFELVIGALPGF------LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp HHHHHHHHTTCSEEEECCCGG------GHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHhCCCEEEEecCCc------ccchHHHHHHhcCcceEeee
Confidence 346889999999999999843 33444444333 66666554
No 225
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=20.51 E-value=1.3e+02 Score=23.71 Aligned_cols=62 Identities=8% Similarity=0.080 Sum_probs=39.0
Q ss_pred cCHHHHhccCCEEEEccCCCCCCcceeCHhHHhccCCCcEEEecCCCCccCHHHHHHHHhcCCcc
Q psy5266 42 LVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLRDKKIG 106 (180)
Q Consensus 42 ~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~mk~g~~lvn~~Rg~~vd~~al~~~L~~~~i~ 106 (180)
.+.+++.+.+|+|++++|-.. +...+ ......++++..++...-| +-.++.+.+.+....+.
T Consensus 63 ~~~~~~~~~~DlVilavK~~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 63 RSAAELETKPDCTLLCIKVVE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp SCGGGCSSCCSEEEECCCCCT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred CCHHHcCCCCCEEEEecCCCC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 467777779999999999553 33333 1122346667778776544 33346777777766553
No 226
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=20.50 E-value=96 Score=26.66 Aligned_cols=72 Identities=8% Similarity=0.052 Sum_probs=45.7
Q ss_pred eeeEEEeccccccCCccceeeccCHHHHhccCCEEEEccCCCCCCcceeCHhHHhc-cCC-CcEEEecCCCCccCHHHH
Q psy5266 20 IVCVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVTCALTKDTEQLIGRKQFSL-MKP-TAILINTSRGGLLDQEAL 96 (180)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h~pl~~~T~glIg~~~i~~-mk~-g~~lvn~~Rg~~vd~~al 96 (180)
.|..+..|||....+.. .....++++.++.||.|++..+... +.-++...+.+ |++ ..+++.. |+ +++.+.+
T Consensus 385 ~g~~V~~~DP~~~~~~~-~~~~~~~~~~~~~ad~vvi~t~~~~--f~~~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~~ 458 (478)
T 3g79_A 385 AGASVMVHDPYVVNYPG-VEISDNLEEVVRNADAIVVLAGHSA--YSSLKADWAKKVSAKANPVIIDG-RN-VIEPDEF 458 (478)
T ss_dssp HTCEEEEECSSCCCBTT-BCEESCHHHHHTTCSEEEECSCCHH--HHSCCHHHHHHHHCCSSCEEEES-SS-CSCHHHH
T ss_pred CCCEEEEECCCcccccC-cceecCHHHHHhcCCEEEEecCCHH--HHhhhHHHHHHHhccCCCEEEEC-CC-CCCHHHH
Confidence 36788889988874322 2224688999999999999977542 23356666654 663 5566653 54 3454433
No 227
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=20.35 E-value=90 Score=24.79 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=20.2
Q ss_pred eEEEeccccccCCccceeeccCHHHHhccCCEEEEc
Q psy5266 22 CVLIRYHVDLTGGSKQVYLILVIRTRSAQSDFIFVT 57 (180)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~D~v~~h 57 (180)
+.+..+|.+.. ++.+.....++++++||+|++-
T Consensus 161 ~~v~V~d~~p~---~g~~p~~~~e~ll~~aD~viiT 193 (270)
T 2h1q_A 161 CDLSILEWSPE---EGDYPLPASEFILPECDYVYIT 193 (270)
T ss_dssp SEEEEEESSCC---TTCEEGGGHHHHGGGCSEEEEE
T ss_pred CCEEEEECCCC---CCCCChHHHHHHhhcCCEEEEE
Confidence 34445555543 2334556677788888888775
Done!