BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5270
(352 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5E9C0|RSU1_BOVIN Ras suppressor protein 1 OS=Bos taurus GN=RSU1 PE=2 SV=1
Length = 277
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/122 (70%), Positives = 100/122 (81%)
Query: 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSS 62
+IT++ LSHNKL +PP +A L NLE+L FNNQIE LPT +SSL KL+ LNLGMNRL++
Sbjct: 41 HITQLVLSHNKLTTVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNT 100
Query: 63 LPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQ 122
LPRGFG+ P LEVLDLTYNNLNE SLPGNFF L TLRALYL DNDFE+LP +IG L LQ
Sbjct: 101 LPRGFGSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQ 160
Query: 123 II 124
I+
Sbjct: 161 IL 162
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 6/74 (8%)
Query: 207 MNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEV 266
MNRL++LPRGFG+ P LE +LDLTYNNLNE SLPGNFF L TLRALYL DNDFE+
Sbjct: 95 MNRLNTLPRGFGSLPALE------VLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEI 148
Query: 267 LPAEIGNLKNLQIM 280
LP +IG L LQI+
Sbjct: 149 LPPDIGKLTKLQIL 162
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 9 LSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFG 68
LS N + +PP + L L+IL+L +N + +LP + L +L+ L++ NRL+ LP
Sbjct: 141 LSDNDFEILPPDIGKLTKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRLTVLP---- 196
Query: 69 AFPVLEVLDLT 79
P L LDLT
Sbjct: 197 --PELGNLDLT 205
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 44 LSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYL 103
L +L + L L N+L+++P LEVL+ N + E LP L+ L+ L L
Sbjct: 36 LFTLSHITQLVLSHNKLTTVPPNIAELKNLEVLNFFNNQIEE--LPTQISSLQKLKHLNL 93
Query: 104 GDNDFEVLPAEIGNLKNLQIILETF 128
G N LP G+L L+++ T+
Sbjct: 94 GMNRLNTLPRGFGSLPALEVLDLTY 118
>sp|Q15404|RSU1_HUMAN Ras suppressor protein 1 OS=Homo sapiens GN=RSU1 PE=1 SV=3
Length = 277
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 100/122 (81%)
Query: 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSS 62
+IT++ LSHNKL +PP +A L NLE+L FNNQIE LPT +SSL KL+ LNLGMNRL++
Sbjct: 41 HITQLVLSHNKLTMVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNT 100
Query: 63 LPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQ 122
LPRGFG+ P LEVLDLTYNNL+E SLPGNFF L TLRALYL DNDFE+LP +IG L LQ
Sbjct: 101 LPRGFGSLPALEVLDLTYNNLSENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQ 160
Query: 123 II 124
I+
Sbjct: 161 IL 162
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 58/74 (78%), Gaps = 6/74 (8%)
Query: 207 MNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEV 266
MNRL++LPRGFG+ P LE +LDLTYNNL+E SLPGNFF L TLRALYL DNDFE+
Sbjct: 95 MNRLNTLPRGFGSLPALE------VLDLTYNNLSENSLPGNFFYLTTLRALYLSDNDFEI 148
Query: 267 LPAEIGNLKNLQIM 280
LP +IG L LQI+
Sbjct: 149 LPPDIGKLTKLQIL 162
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 9 LSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFG 68
LS N + +PP + L L+IL+L +N + +LP + L +L+ L++ NRL+ LP
Sbjct: 141 LSDNDFEILPPDIGKLTKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRLTVLP---- 196
Query: 69 AFPVLEVLDLT 79
P L LDLT
Sbjct: 197 --PELGNLDLT 205
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 44 LSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYL 103
L +L + L L N+L+ +P LEVL+ N + E LP L+ L+ L L
Sbjct: 36 LFTLSHITQLVLSHNKLTMVPPNIAELKNLEVLNFFNNQIEE--LPTQISSLQKLKHLNL 93
Query: 104 GDNDFEVLPAEIGNLKNLQIILETF 128
G N LP G+L L+++ T+
Sbjct: 94 GMNRLNTLPRGFGSLPALEVLDLTY 118
>sp|Q01730|RSU1_MOUSE Ras suppressor protein 1 OS=Mus musculus GN=Rsu1 PE=2 SV=3
Length = 277
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 101/124 (81%)
Query: 1 MLYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRL 60
+ +IT++ LSHNKL +PP +A L NLE+L FNNQIE LPT +SSL KL+ LNLGMNRL
Sbjct: 39 LAHITQLVLSHNKLTTVPPNVAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRL 98
Query: 61 SSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKN 120
++LPRGFG+ +LEVL+LTYNNLNE SLPGNFF L TLRALYL DNDFE+LP +IG L
Sbjct: 99 NTLPRGFGSSRLLEVLELTYNNLNEHSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTK 158
Query: 121 LQII 124
LQI+
Sbjct: 159 LQIL 162
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 58/74 (78%), Gaps = 6/74 (8%)
Query: 207 MNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEV 266
MNRL++LPRGFG+ +LE +L+LTYNNLNE SLPGNFF L TLRALYL DNDFE+
Sbjct: 95 MNRLNTLPRGFGSSRLLE------VLELTYNNLNEHSLPGNFFYLTTLRALYLSDNDFEI 148
Query: 267 LPAEIGNLKNLQIM 280
LP +IG L LQI+
Sbjct: 149 LPPDIGKLTKLQIL 162
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 9 LSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFG 68
LS N + +PP + L L+IL+L +N + +LP + L +L+ L++ NRL+ LP
Sbjct: 141 LSDNDFEILPPDIGKLTKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRLTVLP---- 196
Query: 69 AFPVLEVLDLT 79
P L LDLT
Sbjct: 197 --PELGNLDLT 205
>sp|P42026|NDUS7_BOVIN NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Bos taurus GN=NDUFS7 PE=1 SV=1
Length = 216
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 69/73 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQKK
Sbjct: 144 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK 203
Query: 340 VKRMKILQSWYRR 352
+KR K L+ WYRR
Sbjct: 204 IKREKRLRIWYRR 216
>sp|Q0MQI0|NDUS7_PANTR NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pan troglodytes GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 340 VKRMKILQSWYRR 352
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|P0CB83|NDUS7_PONAB NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pongo abelii GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 340 VKRMKILQSWYRR 352
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|P0CB84|NDUS7_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pongo pygmaeus GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 340 VKRMKILQSWYRR 352
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|Q0MQH9|NDUS7_GORGO NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS7 PE=2
SV=1
Length = 213
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 340 VKRMKILQSWYRR 352
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|O75251|NDUS7_HUMAN NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Homo sapiens GN=NDUFS7 PE=1 SV=3
Length = 213
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 340 VKRMKILQSWYRR 352
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|Q9DC70|NDUS7_MOUSE NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Mus musculus GN=Ndufs7 PE=1 SV=1
Length = 224
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+K
Sbjct: 152 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRK 211
Query: 340 VKRMKILQSWYRR 352
+KR + L+ WYRR
Sbjct: 212 IKREQKLKIWYRR 224
>sp|O47950|NDUS7_NEUCR NADH-ubiquinone oxidoreductase 19.3 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=G17A4.170 PE=2 SV=1
Length = 226
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 67/73 (91%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M +PRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPT+EALMYGI QLQ+K
Sbjct: 154 MPDPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALMYGIFQLQRK 213
Query: 340 VKRMKILQSWYRR 352
++ KI + WYR+
Sbjct: 214 MRNTKITRMWYRK 226
>sp|A8XFG2|NDUS7_CAEBR Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Caenorhabditis briggsae GN=nduf-7 PE=3
SV=1
Length = 199
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 67/73 (91%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M E +WVISMGSCANGGGYYHY+YSV+RGCDR+IPVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 127 MPEAKWVISMGSCANGGGYYHYAYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKK 186
Query: 340 VKRMKILQSWYRR 352
+KR + Q WYRR
Sbjct: 187 IKRKREAQLWYRR 199
>sp|Q94360|NDUS7_CAEEL Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Caenorhabditis elegans GN=nduf-7 PE=3
SV=1
Length = 199
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 67/73 (91%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M E +WVISMGSCANGGGYYHY+YSV+RGCDR+IPVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 127 MPEAKWVISMGSCANGGGYYHYAYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKK 186
Query: 340 VKRMKILQSWYRR 352
+KR + Q WYRR
Sbjct: 187 IKRKREAQLWYRR 199
>sp|Q43844|NDUS7_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Solanum tuberosum PE=2 SV=1
Length = 213
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 65/71 (91%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSY+VVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQKK
Sbjct: 141 MPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK 200
Query: 340 VKRMKILQSWY 350
+ R K L W+
Sbjct: 201 INRRKDLLMWW 211
>sp|Q42577|NDUS7_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Arabidopsis thaliana GN=At5g11770 PE=1
SV=1
Length = 218
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 65/73 (89%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 146 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKK 205
Query: 340 VKRMKILQSWYRR 352
+ R K W+ +
Sbjct: 206 INRRKDFLHWWNK 218
>sp|P42027|NDUS7_BRAOL NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Brassica oleracea PE=2 SV=1
Length = 215
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 65/73 (89%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 143 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKK 202
Query: 340 VKRMKILQSWYRR 352
+ R K W+ +
Sbjct: 203 INRRKDFLHWWNK 215
>sp|O21272|NDUS7_RECAM NADH-ubiquinone oxidoreductase 20 kDa subunit OS=Reclinomonas
americana GN=NAD10 PE=3 SV=1
Length = 182
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 66/73 (90%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWV+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 110 MSEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKK 169
Query: 340 VKRMKILQSWYRR 352
+KR + W ++
Sbjct: 170 IKRSRKTLYWLQK 182
>sp|Q2W3I5|NUOB_MAGSA NADH-quinone oxidoreductase subunit B OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=nuoB PE=3
SV=1
Length = 186
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 58/63 (92%), Positives = 62/63 (98%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPP+AEALMYGILQLQKK
Sbjct: 118 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPSAEALMYGILQLQKK 177
Query: 340 VKR 342
++R
Sbjct: 178 IRR 180
>sp|Q2RU39|NUOB_RHORT NADH-quinone oxidoreductase subunit B OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=nuoB PE=3 SV=1
Length = 185
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPT+EAL+YG+LQLQKK
Sbjct: 117 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALLYGVLQLQKK 176
Query: 340 VKRMKIL 346
+KR L
Sbjct: 177 IKRTGAL 183
>sp|A5IHW2|NUOB_LEGPC NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Corby) GN=nuoB PE=3 SV=1
Length = 158
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKRMKILQS 348
++R +L++
Sbjct: 150 IRRKPVLEA 158
>sp|A1W4M3|NUOB_ACISJ NADH-quinone oxidoreductase subunit B OS=Acidovorax sp. (strain
JS42) GN=nuoB PE=3 SV=1
Length = 159
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQK 149
Query: 340 VKRMKIL 346
++R +
Sbjct: 150 IRRTHTI 156
>sp|B9MEL5|NUOB_ACIET NADH-quinone oxidoreductase subunit B OS=Acidovorax ebreus (strain
TPSY) GN=nuoB PE=3 SV=1
Length = 159
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQK 149
Query: 340 VKRMKIL 346
++R +
Sbjct: 150 IRRTHTI 156
>sp|Q5WT21|NUOB_LEGPL NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Lens) GN=nuoB PE=3 SV=1
Length = 158
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKRMKILQS 348
++R +L++
Sbjct: 150 IRRKPVLEA 158
>sp|Q5ZRT9|NUOB_LEGPH NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=nuoB PE=3 SV=1
Length = 158
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKRMKILQS 348
++R +L++
Sbjct: 150 IRRKPVLEA 158
>sp|Q5X1A8|NUOB_LEGPA NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Paris) GN=nuoB PE=3 SV=1
Length = 158
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKRMKILQS 348
++R +L++
Sbjct: 150 IRRKPVLEA 158
>sp|A9HRU3|NUOB2_GLUDA NADH-quinone oxidoreductase subunit B 2 OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=nuoB2 PE=3 SV=1
Length = 191
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI QLQKK
Sbjct: 122 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIFQLQKK 181
Query: 340 VKR 342
++R
Sbjct: 182 IRR 184
>sp|Q3SEX7|NUOB_THIDA NADH-quinone oxidoreductase subunit B OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=nuoB PE=3 SV=1
Length = 158
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 62/63 (98%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL++GI+QLQKK
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGIIQLQKK 149
Query: 340 VKR 342
++R
Sbjct: 150 IRR 152
>sp|Q82TU4|NUOB_NITEU NADH-quinone oxidoreductase subunit B OS=Nitrosomonas europaea
(strain ATCC 19718 / NBRC 14298) GN=nuoB PE=3 SV=1
Length = 158
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKR 342
+KR
Sbjct: 150 IKR 152
>sp|Q31HF9|NUOB_THICR NADH-quinone oxidoreductase subunit B OS=Thiomicrospira crunogena
(strain XCL-2) GN=nuoB PE=3 SV=1
Length = 158
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKR 342
+KR
Sbjct: 150 IKR 152
>sp|Q7NZI0|NUOB1_CHRVO NADH-quinone oxidoreductase subunit B 1 OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=nuoB1 PE=3 SV=1
Length = 158
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKR 342
+KR
Sbjct: 150 IKR 152
>sp|Q1LPW2|NUOB_RALME NADH-quinone oxidoreductase subunit B OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nuoB PE=3 SV=1
Length = 160
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNK 149
Query: 340 VKRMKIL 346
+KR +
Sbjct: 150 IKRTNTI 156
>sp|B3R3W8|NUOB_CUPTR NADH-quinone oxidoreductase subunit B OS=Cupriavidus taiwanensis
(strain R1 / LMG 19424) GN=nuoB PE=3 SV=1
Length = 160
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNK 149
Query: 340 VKRMKIL 346
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q0KCS9|NUOB_CUPNH NADH-quinone oxidoreductase subunit B OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=nuoB PE=3 SV=1
Length = 160
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNK 149
Query: 340 VKRMKIL 346
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q473U2|NUOB_CUPPJ NADH-quinone oxidoreductase subunit B OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=nuoB PE=3 SV=1
Length = 160
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNK 149
Query: 340 VKRMKIL 346
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q0BSK3|NUOB_GRABC NADH-quinone oxidoreductase subunit B OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=nuoB PE=3 SV=1
Length = 194
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 62/63 (98%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQKK
Sbjct: 125 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGIMQLQKK 184
Query: 340 VKR 342
++R
Sbjct: 185 IRR 187
>sp|A1TLL7|NUOB_ACIAC NADH-quinone oxidoreductase subunit B OS=Acidovorax citrulli
(strain AAC00-1) GN=nuoB PE=3 SV=1
Length = 159
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MSEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQK 149
Query: 340 VKRMKIL 346
++R +
Sbjct: 150 IRRTHTI 156
>sp|A9BNB3|NUOB_DELAS NADH-quinone oxidoreductase subunit B OS=Delftia acidovorans
(strain DSM 14801 / SPH-1) GN=nuoB PE=3 SV=1
Length = 159
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MSEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQK 149
Query: 340 VKRMKIL 346
++R +
Sbjct: 150 IRRTHTI 156
>sp|A1VM61|NUOB_POLNA NADH-quinone oxidoreductase subunit B OS=Polaromonas
naphthalenivorans (strain CJ2) GN=nuoB PE=3 SV=1
Length = 159
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQQK 149
Query: 340 VKR 342
++R
Sbjct: 150 IRR 152
>sp|Q5P1E9|NUOB_AROAE NADH-quinone oxidoreductase subunit B OS=Aromatoleum aromaticum
(strain EbN1) GN=nuoB PE=3 SV=1
Length = 158
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKRMKIL 346
+KR +
Sbjct: 150 IKRTNTI 156
>sp|A1WLP3|NUOB_VEREI NADH-quinone oxidoreductase subunit B OS=Verminephrobacter eiseniae
(strain EF01-2) GN=nuoB PE=3 SV=1
Length = 159
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWV+SMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGILQLQ+K
Sbjct: 90 MSEPRWVLSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGILQLQQK 149
Query: 340 VKR 342
++R
Sbjct: 150 IRR 152
>sp|Q3J829|NUOB2_NITOC NADH-quinone oxidoreductase subunit B 2 OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=nuoB2 PE=3 SV=1
Length = 158
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MSEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKR 342
+KR
Sbjct: 150 IKR 152
>sp|A1K5A9|NUOB1_AZOSB NADH-quinone oxidoreductase subunit B 1 OS=Azoarcus sp. (strain
BH72) GN=nuoB1 PE=3 SV=1
Length = 158
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKRMKIL 346
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q47HH5|NUOB_DECAR NADH-quinone oxidoreductase subunit B OS=Dechloromonas aromatica
(strain RCB) GN=nuoB PE=3 SV=1
Length = 158
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGIIQLQNK 149
Query: 340 VKR 342
++R
Sbjct: 150 IRR 152
>sp|Q1GZL0|NUOB_METFK NADH-quinone oxidoreductase subunit B OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=nuoB
PE=3 SV=1
Length = 158
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSY+VVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 340 VKR 342
+KR
Sbjct: 150 IKR 152
>sp|B8GNY6|NUOB_THISH NADH-quinone oxidoreductase subunit B OS=Thioalkalivibrio sp.
(strain HL-EbGR7) GN=nuoB PE=3 SV=1
Length = 158
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSY+VVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQNK 149
Query: 340 VKR 342
++R
Sbjct: 150 IRR 152
>sp|B2U7R0|NUOB_RALPJ NADH-quinone oxidoreductase subunit B OS=Ralstonia pickettii
(strain 12J) GN=nuoB PE=3 SV=1
Length = 160
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQAK 149
Query: 340 VKRMKIL 346
++R +
Sbjct: 150 IRRTNTI 156
>sp|A6SY06|NUOB_JANMA NADH-quinone oxidoreductase subunit B OS=Janthinobacterium sp.
(strain Marseille) GN=nuoB PE=3 SV=1
Length = 158
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIMQLQNK 149
Query: 340 VKRMKIL 346
++R +
Sbjct: 150 IRRTNTI 156
>sp|A5FX09|NUOB1_ACICJ NADH-quinone oxidoreductase subunit B 1 OS=Acidiphilium cryptum
(strain JF-5) GN=nuoB1 PE=3 SV=1
Length = 186
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 61/63 (96%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI QLQKK
Sbjct: 117 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGITQLQKK 176
Query: 340 VKR 342
++R
Sbjct: 177 IRR 179
>sp|A4G643|NUOB_HERAR NADH-quinone oxidoreductase subunit B OS=Herminiimonas
arsenicoxydans GN=nuoB PE=3 SV=1
Length = 158
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIMQLQNK 149
Query: 340 VKRMKIL 346
++R +
Sbjct: 150 IRRTNTI 156
>sp|Q8XXQ2|NUOB_RALSO NADH-quinone oxidoreductase subunit B OS=Ralstonia solanacearum
(strain GMI1000) GN=nuoB PE=3 SV=1
Length = 160
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 280 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 339
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQAK 149
Query: 340 VKRMKIL 346
++R +
Sbjct: 150 IRRTNTI 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,830,279
Number of Sequences: 539616
Number of extensions: 5571601
Number of successful extensions: 20678
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 608
Number of HSP's that attempted gapping in prelim test: 13222
Number of HSP's gapped (non-prelim): 5063
length of query: 352
length of database: 191,569,459
effective HSP length: 118
effective length of query: 234
effective length of database: 127,894,771
effective search space: 29927376414
effective search space used: 29927376414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)