Query psy5270
Match_columns 352
No_of_seqs 310 out of 2262
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 22:05:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5270.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5270hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 99.9 1.2E-28 2.7E-33 257.5 3.9 303 1-312 259-607 (968)
2 PLN00113 leucine-rich repeat r 99.9 2.1E-28 4.5E-33 255.9 4.9 125 2-127 140-268 (968)
3 KOG0444|consensus 99.9 1.2E-27 2.5E-32 222.9 0.1 262 4-286 57-327 (1255)
4 KOG0472|consensus 99.9 7.9E-27 1.7E-31 207.3 0.2 272 1-284 182-514 (565)
5 KOG0617|consensus 99.9 1.4E-26 3E-31 183.9 -1.9 120 2-121 33-152 (264)
6 KOG0444|consensus 99.9 1.2E-25 2.7E-30 209.5 1.6 277 1-288 77-375 (1255)
7 KOG0472|consensus 99.9 9.6E-27 2.1E-31 206.7 -6.3 256 4-282 47-304 (565)
8 KOG4194|consensus 99.9 6.7E-24 1.4E-28 196.5 3.8 265 2-280 102-397 (873)
9 KOG4194|consensus 99.9 3.1E-22 6.7E-27 185.6 5.5 310 3-338 126-465 (873)
10 KOG1687|consensus 99.8 4.8E-21 1E-25 143.4 6.2 75 278-352 94-168 (168)
11 PRK15370 E3 ubiquitin-protein 99.8 2.1E-20 4.7E-25 186.2 12.6 230 3-293 200-433 (754)
12 PRK15387 E3 ubiquitin-protein 99.8 1.1E-19 2.3E-24 180.4 9.8 238 4-288 203-458 (788)
13 PRK15387 E3 ubiquitin-protein 99.8 2.2E-19 4.8E-24 178.3 9.6 233 3-279 223-473 (788)
14 KOG0618|consensus 99.8 2.9E-20 6.2E-25 180.6 0.7 246 2-290 219-467 (1081)
15 PRK15370 E3 ubiquitin-protein 99.8 6.3E-19 1.4E-23 175.8 8.7 216 3-281 179-394 (754)
16 KOG0532|consensus 99.7 1.9E-19 4.2E-24 166.8 -3.0 67 205-280 196-262 (722)
17 KOG4237|consensus 99.7 3.4E-19 7.3E-24 158.6 -2.3 265 3-280 68-351 (498)
18 KOG0617|consensus 99.7 8.8E-19 1.9E-23 139.6 -1.2 168 21-277 29-198 (264)
19 PLN03210 Resistant to P. syrin 99.7 1E-16 2.2E-21 169.4 13.4 122 3-128 590-713 (1153)
20 KOG0618|consensus 99.7 9.2E-19 2E-23 170.3 -5.1 74 199-280 242-315 (1081)
21 PLN03210 Resistant to P. syrin 99.7 2.7E-16 5.9E-21 166.3 10.6 125 1-128 557-690 (1153)
22 KOG0532|consensus 99.6 2.4E-17 5.3E-22 153.0 -3.3 194 6-290 54-249 (722)
23 COG0377 NuoB NADH:ubiquinone o 99.6 4.8E-15 1E-19 117.9 5.7 65 278-342 98-162 (194)
24 COG4886 Leucine-rich repeat (L 99.5 7.8E-15 1.7E-19 138.7 4.6 197 6-269 97-294 (394)
25 KOG4237|consensus 99.5 9.5E-16 2.1E-20 136.8 -1.7 260 7-287 51-334 (498)
26 COG4886 Leucine-rich repeat (L 99.4 6.3E-14 1.4E-18 132.5 3.6 182 2-249 116-298 (394)
27 PLN03150 hypothetical protein; 99.4 7.5E-13 1.6E-17 131.5 8.2 105 4-109 420-528 (623)
28 cd00116 LRR_RI Leucine-rich re 99.4 6.4E-15 1.4E-19 135.0 -6.2 102 7-109 3-121 (319)
29 cd00116 LRR_RI Leucine-rich re 99.4 2.3E-14 5E-19 131.4 -3.8 211 2-265 51-291 (319)
30 PRK14818 NADH dehydrogenase su 99.3 8E-12 1.7E-16 99.9 6.2 68 278-345 93-160 (173)
31 PF14580 LRR_9: Leucine-rich r 99.3 4.6E-12 9.9E-17 104.6 5.0 106 3-110 20-127 (175)
32 KOG1259|consensus 99.2 1.6E-12 3.4E-17 112.8 0.9 124 3-130 285-410 (490)
33 PLN03150 hypothetical protein; 99.2 1.9E-11 4.2E-16 121.4 6.6 91 27-118 420-513 (623)
34 PRK14813 NADH dehydrogenase su 99.1 6.6E-11 1.4E-15 96.3 6.1 69 278-346 90-159 (189)
35 COG3260 Ni,Fe-hydrogenase III 99.1 1.3E-10 2.8E-15 88.2 6.1 68 278-345 72-139 (148)
36 PRK06411 NADH dehydrogenase su 99.1 2.4E-10 5.2E-15 93.4 5.8 70 278-347 97-166 (183)
37 PRK14816 NADH dehydrogenase su 99.0 2.9E-10 6.2E-15 92.2 5.5 72 278-349 104-175 (182)
38 PRK14815 NADH dehydrogenase su 99.0 3.3E-10 7.1E-15 91.8 5.8 69 278-347 96-164 (183)
39 PF13855 LRR_8: Leucine rich r 99.0 2.2E-10 4.8E-15 78.0 4.1 59 2-60 1-61 (61)
40 CHL00023 ndhK NADH dehydrogena 99.0 3.4E-10 7.4E-15 94.3 5.8 67 278-344 94-161 (225)
41 KOG0531|consensus 99.0 1.7E-10 3.6E-15 109.7 4.3 123 2-128 72-195 (414)
42 PF14580 LRR_9: Leucine-rich r 99.0 8.4E-11 1.8E-15 97.1 1.9 117 9-130 4-124 (175)
43 PF13855 LRR_8: Leucine rich r 99.0 3.7E-10 8E-15 76.9 3.1 57 26-82 2-60 (61)
44 TIGR01957 nuoB_fam NADH-quinon 99.0 1E-09 2.2E-14 86.7 5.7 65 278-342 80-144 (145)
45 PRK14817 NADH dehydrogenase su 99.0 9.9E-10 2.1E-14 89.1 5.5 67 278-345 98-164 (181)
46 KOG3207|consensus 98.9 3.1E-10 6.8E-15 103.2 1.9 107 21-128 117-231 (505)
47 PRK14820 NADH dehydrogenase su 98.9 2.1E-09 4.5E-14 87.4 5.8 65 278-343 96-160 (180)
48 KOG3207|consensus 98.9 2.8E-10 6.1E-15 103.5 0.3 127 2-128 121-255 (505)
49 KOG1259|consensus 98.9 1.9E-10 4.1E-15 100.0 -1.1 112 1-114 306-417 (490)
50 KOG4579|consensus 98.8 1.3E-10 2.9E-15 89.7 -3.4 109 4-114 29-141 (177)
51 PRK14819 NADH dehydrogenase su 98.8 3.9E-09 8.5E-14 89.4 5.0 74 278-351 94-168 (264)
52 PRK14814 NADH dehydrogenase su 98.8 8.3E-09 1.8E-13 84.2 5.7 66 278-344 96-161 (186)
53 PF12799 LRR_4: Leucine Rich r 98.7 2.3E-08 5.1E-13 62.7 3.4 38 3-40 2-39 (44)
54 KOG4658|consensus 98.7 2.6E-08 5.5E-13 101.9 5.7 118 5-125 526-648 (889)
55 KOG0531|consensus 98.6 1.5E-08 3.2E-13 96.5 2.2 102 23-128 70-171 (414)
56 PF12799 LRR_4: Leucine Rich r 98.6 5.6E-08 1.2E-12 61.0 3.8 39 26-64 2-40 (44)
57 KOG1859|consensus 98.5 2.3E-09 4.9E-14 103.3 -5.3 124 3-131 165-291 (1096)
58 KOG4579|consensus 98.5 4.8E-09 1E-13 81.2 -2.8 100 26-127 28-131 (177)
59 PRK13292 trifunctional NADH de 98.5 1.5E-07 3.1E-12 94.4 6.0 67 278-345 85-151 (788)
60 KOG1859|consensus 98.5 4.2E-09 9.1E-14 101.4 -6.0 105 2-109 187-292 (1096)
61 KOG1909|consensus 98.4 6.6E-08 1.4E-12 86.0 1.4 124 2-125 92-247 (382)
62 KOG4658|consensus 98.4 1.3E-07 2.8E-12 96.9 2.6 122 2-124 545-673 (889)
63 KOG2982|consensus 98.3 3.1E-07 6.6E-12 80.2 1.3 222 27-280 47-284 (418)
64 PRK15386 type III secretion pr 97.9 2.4E-05 5.3E-10 72.8 7.4 98 2-110 52-170 (426)
65 KOG1644|consensus 97.9 8.5E-06 1.8E-10 67.5 3.6 121 6-128 23-149 (233)
66 KOG1644|consensus 97.6 0.00013 2.9E-09 60.6 5.6 106 3-109 43-153 (233)
67 PRK15386 type III secretion pr 97.6 0.00015 3.3E-09 67.6 6.5 93 3-107 73-188 (426)
68 TIGR03294 FrhG coenzyme F420 h 97.4 0.00015 3.2E-09 62.9 4.3 58 281-338 76-142 (228)
69 PF01058 Oxidored_q6: NADH ubi 97.4 5E-05 1.1E-09 60.0 0.9 56 281-336 71-131 (131)
70 KOG3665|consensus 97.4 0.00012 2.7E-09 73.4 3.7 105 2-109 148-263 (699)
71 PF13306 LRR_5: Leucine rich r 97.3 0.00078 1.7E-08 52.7 7.0 111 3-120 13-127 (129)
72 PF00560 LRR_1: Leucine Rich R 97.3 9.8E-05 2.1E-09 38.7 1.0 20 4-23 2-21 (22)
73 KOG2982|consensus 97.3 6.6E-05 1.4E-09 66.0 0.4 87 23-109 69-159 (418)
74 KOG3665|consensus 97.3 7.1E-05 1.5E-09 75.1 0.2 124 3-127 123-258 (699)
75 KOG0473|consensus 97.1 5.2E-06 1.1E-10 70.2 -7.7 99 9-109 25-124 (326)
76 PF00560 LRR_1: Leucine Rich R 97.1 0.00026 5.6E-09 37.1 1.4 21 97-117 1-21 (22)
77 COG1941 FrhG Coenzyme F420-red 97.1 0.00055 1.2E-08 58.1 3.7 57 282-338 76-152 (247)
78 COG5238 RNA1 Ran GTPase-activa 97.1 0.00094 2E-08 58.2 5.1 121 1-125 91-248 (388)
79 KOG1909|consensus 96.9 0.00045 9.7E-09 62.1 2.0 124 3-127 158-306 (382)
80 KOG2120|consensus 96.8 2.1E-05 4.6E-10 69.0 -6.8 79 49-128 186-269 (419)
81 KOG2739|consensus 96.8 0.00093 2E-08 57.8 2.8 89 17-109 35-129 (260)
82 KOG2739|consensus 96.5 0.001 2.3E-08 57.5 1.2 112 3-116 44-163 (260)
83 KOG0473|consensus 96.5 5.1E-05 1.1E-09 64.4 -6.8 83 2-84 42-124 (326)
84 KOG2120|consensus 96.4 6.6E-05 1.4E-09 66.0 -6.5 53 4-56 187-242 (419)
85 KOG1201|consensus 96.4 0.0055 1.2E-07 54.3 5.0 78 124-202 152-229 (300)
86 KOG2123|consensus 96.3 0.00015 3.3E-09 63.2 -4.9 97 3-102 20-123 (388)
87 PF13504 LRR_7: Leucine rich r 96.3 0.0026 5.7E-08 30.8 1.4 16 3-18 2-17 (17)
88 PF13306 LRR_5: Leucine rich r 96.3 0.014 3E-07 45.5 6.3 102 16-123 2-107 (129)
89 COG5238 RNA1 Ran GTPase-activa 96.2 0.0038 8.3E-08 54.5 2.8 113 1-113 29-174 (388)
90 PF13504 LRR_7: Leucine rich r 96.0 0.0048 1E-07 29.9 1.5 16 26-41 2-17 (17)
91 smart00369 LRR_TYP Leucine-ric 95.1 0.014 3.1E-07 31.6 1.6 19 2-20 2-20 (26)
92 smart00370 LRR Leucine-rich re 95.1 0.014 3.1E-07 31.6 1.6 19 2-20 2-20 (26)
93 COG0300 DltE Short-chain dehyd 95.0 0.018 3.9E-07 50.8 2.8 81 117-201 115-195 (265)
94 KOG2123|consensus 94.8 0.0032 7E-08 55.1 -2.4 79 26-108 20-100 (388)
95 PRK10468 hydrogenase 2 small s 94.7 0.032 6.9E-07 51.3 3.6 70 281-351 146-219 (371)
96 smart00369 LRR_TYP Leucine-ric 94.6 0.028 6.1E-07 30.4 1.9 17 49-65 3-19 (26)
97 smart00370 LRR Leucine-rich re 94.6 0.028 6.1E-07 30.4 1.9 17 49-65 3-19 (26)
98 TIGR00391 hydA hydrogenase (Ni 94.0 0.086 1.9E-06 48.5 4.8 57 281-337 148-208 (365)
99 KOG1205|consensus 93.6 0.15 3.3E-06 45.5 5.5 80 118-200 123-202 (282)
100 COG4221 Short-chain alcohol de 92.9 0.16 3.6E-06 43.9 4.5 78 117-198 112-189 (246)
101 smart00364 LRR_BAC Leucine-ric 90.9 0.13 2.9E-06 27.8 1.1 17 3-19 3-19 (26)
102 smart00364 LRR_BAC Leucine-ric 88.3 0.32 7E-06 26.3 1.4 16 50-65 4-19 (26)
103 smart00365 LRR_SD22 Leucine-ri 87.3 0.5 1.1E-05 25.6 1.8 13 49-61 3-15 (26)
104 KOG1014|consensus 86.9 0.98 2.1E-05 40.6 4.4 77 120-200 162-238 (312)
105 PRK08339 short chain dehydroge 86.4 0.98 2.1E-05 40.0 4.3 70 125-198 124-193 (263)
106 PF13516 LRR_6: Leucine Rich r 85.8 0.28 6.1E-06 25.8 0.3 14 96-109 2-15 (24)
107 PRK06505 enoyl-(acyl carrier p 83.4 1.9 4.2E-05 38.3 4.8 66 127-198 130-195 (271)
108 PRK08690 enoyl-(acyl carrier p 82.8 2.5 5.4E-05 37.3 5.2 69 125-198 128-196 (261)
109 KOG4169|consensus 82.3 0.81 1.8E-05 39.3 1.7 76 125-202 114-192 (261)
110 KOG4308|consensus 81.5 0.026 5.7E-07 54.5 -8.5 125 4-128 146-299 (478)
111 PRK08415 enoyl-(acyl carrier p 81.5 2.2 4.8E-05 38.0 4.4 73 120-198 121-193 (274)
112 PRK12481 2-deoxy-D-gluconate 3 80.2 4 8.6E-05 35.7 5.5 77 119-199 116-193 (251)
113 PRK06603 enoyl-(acyl carrier p 80.0 2.8 6E-05 37.0 4.5 65 128-198 132-196 (260)
114 PRK08594 enoyl-(acyl carrier p 79.8 2.8 6E-05 36.9 4.4 65 128-198 133-197 (257)
115 KOG1947|consensus 79.5 0.46 9.9E-06 45.8 -0.8 123 2-124 188-326 (482)
116 PRK08416 7-alpha-hydroxysteroi 79.5 3.7 8E-05 36.1 5.1 67 129-199 136-202 (260)
117 PLN02780 ketoreductase/ oxidor 79.5 2.3 5E-05 39.0 3.9 72 124-199 172-245 (320)
118 PRK07063 short chain dehydroge 79.4 2.2 4.7E-05 37.5 3.6 76 119-198 119-194 (260)
119 KOG1610|consensus 78.2 4.5 9.7E-05 36.5 5.1 64 132-199 152-215 (322)
120 PRK06079 enoyl-(acyl carrier p 77.9 3.4 7.3E-05 36.2 4.4 70 124-199 125-194 (252)
121 PRK06997 enoyl-(acyl carrier p 76.9 3.4 7.4E-05 36.5 4.1 69 124-198 127-195 (260)
122 KOG4308|consensus 76.5 0.046 1E-06 52.8 -8.5 108 2-109 172-303 (478)
123 smart00368 LRR_RI Leucine rich 76.0 2.2 4.9E-05 23.4 1.7 13 26-38 3-15 (28)
124 PRK07370 enoyl-(acyl carrier p 75.7 3.7 8.1E-05 36.1 4.0 74 119-198 124-197 (258)
125 PRK07062 short chain dehydroge 75.6 4.6 0.0001 35.5 4.6 68 128-199 129-196 (265)
126 PRK12859 3-ketoacyl-(acyl-carr 73.8 5.5 0.00012 34.9 4.6 68 127-198 137-204 (256)
127 PRK08589 short chain dehydroge 73.5 5.7 0.00012 35.2 4.7 68 127-199 124-191 (272)
128 PRK05599 hypothetical protein; 73.5 4 8.6E-05 35.6 3.6 67 129-199 120-187 (246)
129 PRK08340 glucose-1-dehydrogena 73.4 4.6 9.9E-05 35.5 4.0 67 128-198 120-187 (259)
130 PLN02730 enoyl-[acyl-carrier-p 73.1 3.5 7.5E-05 37.5 3.2 77 118-199 154-231 (303)
131 KOG1200|consensus 72.2 3.1 6.6E-05 35.0 2.3 60 137-200 143-202 (256)
132 PRK12747 short chain dehydroge 71.4 6.8 0.00015 34.1 4.6 66 128-199 130-195 (252)
133 PRK06935 2-deoxy-D-gluconate 3 70.1 8 0.00017 33.8 4.8 76 119-198 124-199 (258)
134 PRK05993 short chain dehydroge 69.4 8.3 0.00018 34.3 4.8 67 128-198 118-184 (277)
135 PRK08862 short chain dehydroge 69.3 10 0.00022 32.7 5.2 64 128-198 126-190 (227)
136 PRK08159 enoyl-(acyl carrier p 69.3 5.7 0.00012 35.3 3.7 58 137-198 141-198 (272)
137 PRK07533 enoyl-(acyl carrier p 69.0 8.3 0.00018 33.9 4.6 67 127-199 133-199 (258)
138 PRK07825 short chain dehydroge 68.6 9 0.0002 33.8 4.8 72 124-199 116-187 (273)
139 PRK06139 short chain dehydroge 68.2 6.6 0.00014 36.1 4.0 71 127-200 125-195 (330)
140 KOG0725|consensus 67.8 14 0.00029 33.1 5.7 65 131-199 136-201 (270)
141 KOG1207|consensus 67.6 5.4 0.00012 32.8 2.8 58 136-197 128-185 (245)
142 PRK08277 D-mannonate oxidoredu 67.4 8.6 0.00019 34.1 4.5 68 127-198 143-210 (278)
143 PRK07984 enoyl-(acyl carrier p 65.6 8.8 0.00019 33.9 4.1 58 137-198 138-195 (262)
144 PRK07791 short chain dehydroge 64.7 16 0.00036 32.6 5.8 53 137-193 149-201 (286)
145 PRK05876 short chain dehydroge 63.5 13 0.00027 33.1 4.8 73 123-199 120-193 (275)
146 PRK08303 short chain dehydroge 63.3 12 0.00027 33.9 4.7 69 127-199 141-212 (305)
147 PRK06113 7-alpha-hydroxysteroi 63.2 17 0.00037 31.7 5.5 67 129-199 130-196 (255)
148 PRK07024 short chain dehydroge 62.9 15 0.00033 32.0 5.1 68 127-198 120-187 (257)
149 PRK08993 2-deoxy-D-gluconate 3 62.4 17 0.00037 31.6 5.4 68 128-199 127-195 (253)
150 PRK08085 gluconate 5-dehydroge 62.0 18 0.00038 31.5 5.4 67 129-199 129-195 (254)
151 PRK05855 short chain dehydroge 61.8 11 0.00025 37.2 4.5 69 128-200 434-503 (582)
152 PRK06114 short chain dehydroge 61.1 18 0.00039 31.5 5.3 77 119-199 119-197 (254)
153 COG3967 DltE Short-chain dehyd 61.0 23 0.00051 30.2 5.4 78 117-198 111-188 (245)
154 PRK06398 aldose dehydrogenase; 60.9 14 0.0003 32.4 4.5 69 126-199 112-180 (258)
155 PRK06484 short chain dehydroge 60.6 14 0.0003 36.2 4.9 65 129-199 387-451 (520)
156 PRK09242 tropinone reductase; 60.5 22 0.00049 30.9 5.8 67 128-198 130-196 (257)
157 PRK08265 short chain dehydroge 60.4 14 0.0003 32.4 4.5 67 127-198 120-186 (261)
158 PRK06484 short chain dehydroge 60.2 17 0.00037 35.6 5.4 78 118-199 113-191 (520)
159 PRK07478 short chain dehydroge 60.1 15 0.00033 31.9 4.6 67 128-198 126-193 (254)
160 PRK06841 short chain dehydroge 60.0 19 0.0004 31.3 5.2 67 128-198 131-197 (255)
161 PRK07097 gluconate 5-dehydroge 59.8 17 0.00037 31.9 4.9 75 120-198 121-195 (265)
162 KOG3864|consensus 59.7 1.1 2.4E-05 37.7 -2.5 79 26-105 102-185 (221)
163 PRK07904 short chain dehydroge 59.3 17 0.00038 31.8 4.8 67 128-198 129-195 (253)
164 PRK07831 short chain dehydroge 58.0 16 0.00034 32.1 4.3 68 128-199 139-207 (262)
165 PRK07985 oxidoreductase; Provi 57.3 19 0.00042 32.3 4.9 59 137-199 178-236 (294)
166 KOG3864|consensus 57.1 4 8.7E-05 34.5 0.3 83 49-131 102-188 (221)
167 PRK06125 short chain dehydroge 56.6 13 0.00029 32.4 3.6 71 124-198 119-189 (259)
168 PRK06463 fabG 3-ketoacyl-(acyl 56.1 20 0.00044 31.1 4.7 69 127-199 120-189 (255)
169 PRK06172 short chain dehydroge 56.0 16 0.00035 31.7 4.0 68 128-199 127-194 (253)
170 KOG1947|consensus 55.8 5.7 0.00012 38.1 1.2 102 1-102 213-327 (482)
171 PRK07035 short chain dehydroge 55.7 23 0.0005 30.7 5.0 67 129-199 129-195 (252)
172 PF13561 adh_short_C2: Enoyl-( 55.7 9 0.0002 33.2 2.4 60 137-199 126-185 (241)
173 PRK06550 fabG 3-ketoacyl-(acyl 55.6 24 0.00053 30.1 5.1 67 128-198 110-176 (235)
174 PRK06171 sorbitol-6-phosphate 55.5 26 0.00057 30.6 5.4 66 127-196 127-192 (266)
175 PRK06300 enoyl-(acyl carrier p 54.2 11 0.00025 34.1 2.8 72 122-198 157-229 (299)
176 PRK05872 short chain dehydroge 54.0 21 0.00045 32.1 4.5 67 128-199 127-193 (296)
177 PRK06179 short chain dehydroge 53.6 27 0.00059 30.6 5.2 68 127-198 114-181 (270)
178 PRK06523 short chain dehydroge 53.6 28 0.0006 30.3 5.2 67 128-198 121-188 (260)
179 KOG4341|consensus 53.5 4.4 9.5E-05 38.1 -0.0 14 69-82 370-383 (483)
180 TIGR01500 sepiapter_red sepiap 53.3 15 0.00032 32.1 3.4 66 129-198 133-200 (256)
181 KOG3763|consensus 52.0 6.7 0.00015 38.2 1.0 61 46-109 216-283 (585)
182 PRK05884 short chain dehydroge 51.3 23 0.0005 30.3 4.2 62 127-198 115-176 (223)
183 TIGR03325 BphB_TodD cis-2,3-di 51.1 25 0.00055 30.7 4.5 68 126-199 124-191 (262)
184 KOG1204|consensus 50.7 10 0.00023 32.7 1.8 65 129-198 128-193 (253)
185 TIGR01832 kduD 2-deoxy-D-gluco 50.7 23 0.00049 30.6 4.1 66 129-198 123-189 (248)
186 smart00015 IQ Short calmodulin 50.6 7.1 0.00015 20.9 0.5 13 340-352 3-15 (26)
187 TIGR00864 PCC polycystin catio 50.4 9.6 0.00021 44.3 2.0 31 8-38 1-32 (2740)
188 TIGR00864 PCC polycystin catio 49.5 11 0.00024 43.8 2.2 31 31-61 1-32 (2740)
189 PRK08642 fabG 3-ketoacyl-(acyl 49.4 28 0.00061 30.1 4.5 67 128-198 129-195 (253)
190 PRK06124 gluconate 5-dehydroge 48.9 34 0.00074 29.7 5.0 66 129-198 131-196 (256)
191 PLN02253 xanthoxin dehydrogena 48.4 33 0.00072 30.3 4.9 66 129-198 139-204 (280)
192 PRK12748 3-ketoacyl-(acyl-carr 47.9 34 0.00074 29.7 4.8 66 129-198 138-203 (256)
193 PRK08936 glucose-1-dehydrogena 47.8 39 0.00084 29.5 5.2 66 129-198 128-194 (261)
194 PRK06180 short chain dehydroge 47.2 37 0.0008 30.0 5.0 68 127-198 119-186 (277)
195 PRK06182 short chain dehydroge 46.6 28 0.00062 30.6 4.1 67 128-198 116-182 (273)
196 PRK07578 short chain dehydroge 46.5 22 0.00047 29.6 3.2 57 137-198 104-160 (199)
197 PRK06200 2,3-dihydroxy-2,3-dih 45.8 46 0.001 29.0 5.4 65 129-199 128-192 (263)
198 PRK07109 short chain dehydroge 45.1 37 0.00079 31.2 4.7 70 128-199 127-196 (334)
199 TIGR01831 fabG_rel 3-oxoacyl-( 44.7 40 0.00087 28.8 4.7 61 135-199 126-186 (239)
200 COG1740 HyaA Ni,Fe-hydrogenase 44.6 42 0.00091 30.6 4.7 52 282-334 147-203 (355)
201 PRK05650 short chain dehydroge 44.4 38 0.00082 29.7 4.6 66 129-198 120-185 (270)
202 PRK07832 short chain dehydroge 44.3 46 0.001 29.2 5.2 69 127-199 119-188 (272)
203 PRK07523 gluconate 5-dehydroge 43.2 48 0.001 28.7 5.0 66 129-198 130-195 (255)
204 KOG1199|consensus 43.1 7.7 0.00017 31.8 -0.1 65 134-202 143-207 (260)
205 PRK05867 short chain dehydroge 42.8 62 0.0013 28.0 5.7 74 122-199 122-198 (253)
206 PRK08703 short chain dehydroge 42.5 48 0.001 28.4 4.9 68 129-199 131-198 (239)
207 PRK05866 short chain dehydroge 42.3 35 0.00076 30.6 4.1 67 129-199 162-229 (293)
208 PF00612 IQ: IQ calmodulin-bin 42.2 15 0.00032 18.4 0.9 12 341-352 2-13 (21)
209 PRK07201 short chain dehydroge 42.2 38 0.00083 34.2 4.8 68 129-200 493-560 (657)
210 PRK08263 short chain dehydroge 42.1 50 0.0011 29.1 5.1 66 129-198 120-185 (275)
211 PRK08278 short chain dehydroge 41.8 54 0.0012 28.9 5.2 63 127-193 131-195 (273)
212 PRK08220 2,3-dihydroxybenzoate 41.0 65 0.0014 27.7 5.5 67 129-199 119-185 (252)
213 PRK06128 oxidoreductase; Provi 41.0 39 0.00084 30.4 4.2 58 137-198 184-241 (300)
214 PRK07889 enoyl-(acyl carrier p 40.3 40 0.00086 29.5 4.0 64 128-198 131-194 (256)
215 PRK08063 enoyl-(acyl carrier p 39.5 58 0.0013 28.0 5.0 65 129-197 125-189 (250)
216 PRK12743 oxidoreductase; Provi 37.6 62 0.0013 28.1 4.8 66 129-198 123-189 (256)
217 PRK06483 dihydromonapterin red 37.2 53 0.0012 28.0 4.3 63 129-196 117-181 (236)
218 KOG4341|consensus 36.4 19 0.0004 34.1 1.3 63 45-107 369-437 (483)
219 PRK12938 acetyacetyl-CoA reduc 36.2 66 0.0014 27.6 4.8 67 129-199 124-190 (246)
220 KOG1209|consensus 35.6 19 0.0004 30.9 1.1 65 131-199 125-189 (289)
221 PRK07102 short chain dehydroge 35.0 75 0.0016 27.2 4.9 66 129-198 119-184 (243)
222 PRK12824 acetoacetyl-CoA reduc 34.8 77 0.0017 27.0 5.0 65 129-197 123-187 (245)
223 KOG3763|consensus 34.4 19 0.00042 35.1 1.1 61 24-85 217-284 (585)
224 TIGR02685 pter_reduc_Leis pter 34.1 82 0.0018 27.5 5.1 55 138-196 153-207 (267)
225 PRK12936 3-ketoacyl-(acyl-carr 33.5 97 0.0021 26.4 5.4 65 130-198 124-188 (245)
226 PRK07069 short chain dehydroge 32.2 78 0.0017 27.2 4.6 70 128-199 121-190 (251)
227 PRK07454 short chain dehydroge 31.7 92 0.002 26.6 4.9 66 129-198 126-191 (241)
228 PRK12428 3-alpha-hydroxysteroi 31.6 55 0.0012 28.2 3.5 44 152-199 131-175 (241)
229 PRK08267 short chain dehydroge 30.1 72 0.0016 27.7 4.0 66 129-198 120-185 (260)
230 PRK07677 short chain dehydroge 29.8 72 0.0016 27.6 3.9 66 128-196 120-186 (252)
231 PRK08643 acetoin reductase; Va 29.5 91 0.002 26.9 4.6 59 137-199 131-189 (256)
232 PRK06198 short chain dehydroge 28.9 1E+02 0.0022 26.6 4.8 66 129-198 127-193 (260)
233 PRK05693 short chain dehydroge 28.8 1.1E+02 0.0024 26.8 5.0 66 129-199 115-180 (274)
234 PRK12823 benD 1,6-dihydroxycyc 28.7 1E+02 0.0022 26.7 4.7 65 128-198 127-191 (260)
235 smart00367 LRR_CC Leucine-rich 28.6 39 0.00085 17.8 1.3 11 25-35 2-12 (26)
236 PRK07067 sorbitol dehydrogenas 28.3 1E+02 0.0022 26.7 4.6 58 137-198 132-189 (257)
237 PRK09291 short chain dehydroge 28.3 1.2E+02 0.0026 26.1 5.1 65 129-197 116-180 (257)
238 COG1028 FabG Dehydrogenases wi 28.3 78 0.0017 27.2 3.9 55 139-198 137-192 (251)
239 PRK08226 short chain dehydroge 28.2 84 0.0018 27.3 4.1 66 129-198 125-191 (263)
240 KOG4231|consensus 27.8 20 0.00044 34.6 0.0 61 230-292 107-167 (763)
241 PRK06914 short chain dehydroge 27.7 1.4E+02 0.003 26.2 5.4 66 129-198 124-189 (280)
242 PRK06101 short chain dehydroge 27.7 1.2E+02 0.0027 25.9 5.0 59 137-199 120-178 (240)
243 PRK09072 short chain dehydroge 27.6 81 0.0018 27.5 3.9 66 129-198 123-188 (263)
244 PRK07231 fabG 3-ketoacyl-(acyl 27.6 1.2E+02 0.0026 25.9 4.9 66 129-198 125-190 (251)
245 PRK08628 short chain dehydroge 27.2 99 0.0021 26.7 4.4 58 137-198 132-189 (258)
246 PRK06194 hypothetical protein; 27.0 1.4E+02 0.0031 26.3 5.4 72 125-198 122-199 (287)
247 PRK09009 C factor cell-cell si 26.8 1.1E+02 0.0025 25.9 4.6 70 128-199 115-187 (235)
248 PF00106 adh_short: short chai 26.5 51 0.0011 26.2 2.2 42 135-176 125-166 (167)
249 TIGR01829 AcAcCoA_reduct aceto 26.5 1.3E+02 0.0029 25.5 5.0 66 128-197 120-185 (242)
250 PRK07856 short chain dehydroge 26.1 1E+02 0.0022 26.6 4.2 65 129-198 118-183 (252)
251 PRK06940 short chain dehydroge 26.0 99 0.0021 27.3 4.2 41 155-199 166-206 (275)
252 PRK12939 short chain dehydroge 25.9 1.3E+02 0.0027 25.8 4.8 66 129-198 127-192 (250)
253 PRK07023 short chain dehydroge 25.8 86 0.0019 26.9 3.7 65 129-198 121-185 (243)
254 PRK06949 short chain dehydroge 25.6 1.5E+02 0.0032 25.5 5.2 58 137-198 145-202 (258)
255 PRK06924 short chain dehydroge 25.4 1.2E+02 0.0027 25.9 4.7 69 128-198 123-192 (251)
256 PRK12742 oxidoreductase; Provi 24.8 1.6E+02 0.0035 24.9 5.2 58 137-198 124-182 (237)
257 PRK12935 acetoacetyl-CoA reduc 24.7 1.5E+02 0.0033 25.3 5.1 65 129-197 127-191 (247)
258 PRK12384 sorbitol-6-phosphate 24.3 1.9E+02 0.0041 25.0 5.6 62 129-194 124-186 (259)
259 PRK07666 fabG 3-ketoacyl-(acyl 24.2 1.4E+02 0.0031 25.3 4.8 66 129-198 127-192 (239)
260 PRK06057 short chain dehydroge 24.0 1.8E+02 0.0039 25.1 5.4 67 129-199 124-191 (255)
261 PRK10538 malonic semialdehyde 23.0 1.1E+02 0.0025 26.2 4.0 64 129-196 118-181 (248)
262 PRK05875 short chain dehydroge 22.8 1.4E+02 0.0029 26.2 4.5 65 129-197 130-194 (276)
263 PRK06947 glucose-1-dehydrogena 22.7 2.1E+02 0.0046 24.3 5.6 59 137-199 135-194 (248)
264 PRK06701 short chain dehydroge 22.3 1.7E+02 0.0038 26.0 5.1 58 137-198 174-231 (290)
265 PRK07792 fabG 3-ketoacyl-(acyl 21.6 1.7E+02 0.0038 26.2 5.0 52 138-193 148-199 (306)
266 PRK07576 short chain dehydroge 21.2 1.4E+02 0.0031 26.0 4.2 55 137-195 136-190 (264)
267 PRK06482 short chain dehydroge 20.9 1.8E+02 0.0038 25.5 4.8 64 129-196 119-182 (276)
268 PRK07577 short chain dehydroge 20.7 2.1E+02 0.0046 24.1 5.1 65 129-198 111-175 (234)
269 PRK08261 fabG 3-ketoacyl-(acyl 20.6 1.4E+02 0.0031 28.5 4.4 58 136-197 334-391 (450)
270 PRK06138 short chain dehydroge 20.3 1.9E+02 0.0041 24.7 4.8 64 130-197 125-188 (252)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.95 E-value=1.2e-28 Score=257.55 Aligned_cols=303 Identities=24% Similarity=0.339 Sum_probs=179.6
Q ss_pred CCCccEEEeeCCcCc-ccCccccCCCCCCEEEccCCcCc-ccccccCCCCCCcEEEccCCCCC-ccccccCCCCCCCEEE
Q psy5270 1 MLYITRITLSHNKLK-EIPPGLANLVNLEILTLFNNQIE-TLPTSLSSLPKLRILNLGMNRLS-SLPRGFGAFPVLEVLD 77 (352)
Q Consensus 1 l~~L~~L~Ls~N~l~-~ip~~l~~l~~L~~L~L~~N~l~-~ip~~l~~L~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~ 77 (352)
+++|++|++++|.++ .+|.+++++++|++|++++|.++ .+|..+.++++|+.|++++|.++ .+|..++.+++|+.|+
T Consensus 259 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 338 (968)
T PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338 (968)
T ss_pred CCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEE
Confidence 456777888888777 67777777778888888888777 66777777777777777777777 5677777777777777
Q ss_pred ccCCCCCCCCCCCccccCccCcEEEccCCccc-cchhhccCcccHHHHHHhc------chhhHhhc-CceEeecc-----
Q psy5270 78 LTYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNLKNLQIILETF------LPDMMEKN-RGHIVGIS----- 144 (352)
Q Consensus 78 Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~-~ip~~~~nl~~L~~L~l~~------~p~~~~~~-~g~i~~is----- 144 (352)
+++|++++ .+|..++.+++|+.|++++|+++ .+|.+++.+.+++.++++. .|...... ......+.
T Consensus 339 L~~n~l~~-~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~ 417 (968)
T PLN00113 339 LWSNKFSG-EIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFS 417 (968)
T ss_pred CcCCCCcC-cCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEee
Confidence 77777776 67777777777777777777776 5666666655555554432 11111100 00111110
Q ss_pred --ccccccCCCCccccccchhhhhhhhHHhHHHH-------------------------HHHHhcCCceeecccCccc-c
Q psy5270 145 --SMAGIVGLPNLVPYCASKFAVRGLMEALAEEL-------------------------REDARNSKIKFTSIFPFMV-D 196 (352)
Q Consensus 145 --s~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l-------------------------~~~~~~~~n~~~g~~P~~~-~ 196 (352)
....+..++.+.....+.+.+.+........+ ...+++++|++++..|..+ .
T Consensus 418 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~ 497 (968)
T PLN00113 418 GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGS 497 (968)
T ss_pred eECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhh
Confidence 01122333444334444443333221111100 0123344444444444322 2
Q ss_pred cCCccCcccccccCC-CcccCCCCCcccchhhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcce-ecchhhhcc
Q psy5270 197 TGLCKNPKIKMNRLS-SLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNL 274 (352)
Q Consensus 197 ~~~l~~l~l~~n~l~-~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~-~iP~~l~~l 274 (352)
...+..++++.|+++ .+|..++.+++| +.|++++|.++| .+|..+..+++|++|||++|+++ .+|..++++
T Consensus 498 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L------~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 570 (968)
T PLN00113 498 LSELMQLKLSENKLSGEIPDELSSCKKL------VSLDLSHNQLSG-QIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNV 570 (968)
T ss_pred hhccCEEECcCCcceeeCChHHcCccCC------CEEECCCCcccc-cCChhHhCcccCCEEECCCCcccccCChhHhcC
Confidence 334455555556555 555555555555 678888888887 78888888888888888888888 788888888
Q ss_pred cccccccCCceeeeccccccCCcccccccccccCCCcc
Q psy5270 275 KNLQIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRI 312 (352)
Q Consensus 275 ~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (352)
++|+.+....+.. .+.++..+.+..+....+.|.+.+
T Consensus 571 ~~L~~l~ls~N~l-~~~~p~~~~~~~~~~~~~~~n~~l 607 (968)
T PLN00113 571 ESLVQVNISHNHL-HGSLPSTGAFLAINASAVAGNIDL 607 (968)
T ss_pred cccCEEeccCCcc-eeeCCCcchhcccChhhhcCCccc
Confidence 8888775555443 233333333333334444444433
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=2.1e-28 Score=255.88 Aligned_cols=125 Identities=34% Similarity=0.533 Sum_probs=72.0
Q ss_pred CCccEEEeeCCcCc-ccCccccCCCCCCEEEccCCcCc-ccccccCCCCCCcEEEccCCCCC-ccccccCCCCCCCEEEc
Q psy5270 2 LYITRITLSHNKLK-EIPPGLANLVNLEILTLFNNQIE-TLPTSLSSLPKLRILNLGMNRLS-SLPRGFGAFPVLEVLDL 78 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~-~ip~~l~~l~~L~~L~L~~N~l~-~ip~~l~~L~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L 78 (352)
++|++|||++|.++ .+|..++++++|++|+|++|.+. .+|..++++++|++|++++|+++ .+|..++++++|+.|++
T Consensus 140 ~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 219 (968)
T PLN00113 140 PNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYL 219 (968)
T ss_pred CCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEEC
Confidence 34555555555555 45555555556666666666554 45555556666666666666555 45555556666666666
Q ss_pred cCCCCCCCCCCCccccCccCcEEEccCCccc-cchhhccCcccHHHHHHh
Q psy5270 79 TYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNLKNLQIILET 127 (352)
Q Consensus 79 s~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~-~ip~~~~nl~~L~~L~l~ 127 (352)
++|++++ .+|..++++++|++|++++|+++ .+|..++++++|+.|+++
T Consensus 220 ~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 268 (968)
T PLN00113 220 GYNNLSG-EIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLY 268 (968)
T ss_pred cCCccCC-cCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECc
Confidence 6666555 45555666666666666666555 455555555555555444
No 3
>KOG0444|consensus
Probab=99.93 E-value=1.2e-27 Score=222.88 Aligned_cols=262 Identities=25% Similarity=0.378 Sum_probs=144.2
Q ss_pred ccEEEeeCCcCcccCccccCCCCCCEEEccCCcCc--ccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCC
Q psy5270 4 ITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIE--TLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYN 81 (352)
Q Consensus 4 L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~--~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N 81 (352)
|+.|.+++|++..+-.++..++.|+.+++..|++. .||+.+..|..|++|||++|++.++|..+..-+++-+|+||+|
T Consensus 57 LEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N 136 (1255)
T KOG0444|consen 57 LEHLSMAHNQLISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYN 136 (1255)
T ss_pred hhhhhhhhhhhHhhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccC
Confidence 33344444444444334444444444444444443 4455555555555555555555555555555555555555555
Q ss_pred CCCCCCCCCc-cccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCcccccc
Q psy5270 82 NLNEQSLPGN-FFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCA 160 (352)
Q Consensus 82 ~l~g~~~p~~-~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~ 160 (352)
++. .||.. |.+++.|-+|||++|++..+|+.+..+..|+.|.+++.|....+.. .+..++.+..+..
T Consensus 137 ~Ie--tIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLr----------QLPsmtsL~vLhm 204 (1255)
T KOG0444|consen 137 NIE--TIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLR----------QLPSMTSLSVLHM 204 (1255)
T ss_pred ccc--cCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHh----------cCccchhhhhhhc
Confidence 553 34543 3355556666666666666666666666666666665554332221 1111111111111
Q ss_pred chh--hhhhhhHHhHHHH--HHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhcc
Q psy5270 161 SKF--AVRGLMEALAEEL--REDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTY 236 (352)
Q Consensus 161 s~~--~l~~~~~~l~~~l--~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~ 236 (352)
+.. .+..+..++ ..+ ..+++++.|.+.-..........+..++|+.|+++++....+...++ ++|+||+
T Consensus 205 s~TqRTl~N~Ptsl-d~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~l------EtLNlSr 277 (1255)
T KOG0444|consen 205 SNTQRTLDNIPTSL-DDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENL------ETLNLSR 277 (1255)
T ss_pred ccccchhhcCCCch-hhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhh------hhhcccc
Confidence 110 000111111 111 12344555555443333334455666666666666655555444444 7999999
Q ss_pred ccccccCCCchhhhhHHhHhhhCCCCcce--ecchhhhcccccccccCCcee
Q psy5270 237 NNLNEQSLPGNFFMLETLRALYLGDNDFE--VLPAEIGNLKNLQIMLEPRWV 286 (352)
Q Consensus 237 N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~--~iP~~l~~l~~L~~l~~~~~~ 286 (352)
|+++ .+|+.+++|+.|+.|++.+|+++ .||++||+|.+|+++-..++.
T Consensus 278 NQLt--~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~ 327 (1255)
T KOG0444|consen 278 NQLT--VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK 327 (1255)
T ss_pred chhc--cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc
Confidence 9998 59999999999999999999998 899999999999998555543
No 4
>KOG0472|consensus
Probab=99.92 E-value=7.9e-27 Score=207.28 Aligned_cols=272 Identities=28% Similarity=0.372 Sum_probs=176.4
Q ss_pred CCCccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccC-CCCCCCEEEcc
Q psy5270 1 MLYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFG-AFPVLEVLDLT 79 (352)
Q Consensus 1 l~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~-~l~~L~~L~Ls 79 (352)
|++|+.||...|-++.+|+++|.|.+|..|||..|.+..+| +|.+++.|..|+++.|+++.+|.+.+ .+.++.+|||.
T Consensus 182 m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLR 260 (565)
T KOG0472|consen 182 MKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLR 260 (565)
T ss_pred HHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeecc
Confidence 45678888888888888888888888888888888888888 78888888888888888888888866 79999999999
Q ss_pred CCCCCCCCCCCccccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhh--------------c---------
Q psy5270 80 YNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEK--------------N--------- 136 (352)
Q Consensus 80 ~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~--------------~--------- 136 (352)
.|+++. +|++++-+++|++||+++|.++.+|.++||+ .|..+.+...|-..-+ .
T Consensus 261 dNklke--~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dgl 337 (565)
T KOG0472|consen 261 DNKLKE--VPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGL 337 (565)
T ss_pred cccccc--CchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCC
Confidence 999984 8999999999999999999999999999998 7777655543311000 0
Q ss_pred ----CceEeecc----c----------------cccccCCCCc----------cccccchhhhhhhhHHhHH--HHHHHH
Q psy5270 137 ----RGHIVGIS----S----------------MAGIVGLPNL----------VPYCASKFAVRGLMEALAE--ELREDA 180 (352)
Q Consensus 137 ----~g~i~~is----s----------------~~~l~~lp~l----------~~~~~s~~~l~~~~~~l~~--~l~~~~ 180 (352)
.|...... + -..+...|.. .....+++++..+.+.+.. ++...+
T Consensus 338 S~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l 417 (565)
T KOG0472|consen 338 SQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDL 417 (565)
T ss_pred CCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHH
Confidence 00000000 0 0000011110 0112223333333222221 222333
Q ss_pred hcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhccccccccCCCchhhhhHHhHhhhCC
Q psy5270 181 RNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLG 260 (352)
Q Consensus 181 ~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls 260 (352)
.+++|.+..+.-.....+.++.+++++|-+..+|.+++.+..| +.||+|+|.|. .+|.++..+..++++-.+
T Consensus 418 ~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~lv~L------q~LnlS~NrFr--~lP~~~y~lq~lEtllas 489 (565)
T KOG0472|consen 418 VLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEEMGSLVRL------QTLNLSFNRFR--MLPECLYELQTLETLLAS 489 (565)
T ss_pred HhhcCccccchHHHHhhhcceeeecccchhhhcchhhhhhhhh------heecccccccc--cchHHHhhHHHHHHHHhc
Confidence 4444444332222224456677788888888888888877776 57777777775 467666666666666666
Q ss_pred CCcceecchh-hhcccccccccCCc
Q psy5270 261 DNDFEVLPAE-IGNLKNLQIMLEPR 284 (352)
Q Consensus 261 ~N~l~~iP~~-l~~l~~L~~l~~~~ 284 (352)
+|++..+|++ ++++++|..++.+.
T Consensus 490 ~nqi~~vd~~~l~nm~nL~tLDL~n 514 (565)
T KOG0472|consen 490 NNQIGSVDPSGLKNMRNLTTLDLQN 514 (565)
T ss_pred cccccccChHHhhhhhhcceeccCC
Confidence 6666655444 66666666664443
No 5
>KOG0617|consensus
Probab=99.91 E-value=1.4e-26 Score=183.94 Aligned_cols=120 Identities=75% Similarity=1.191 Sum_probs=73.6
Q ss_pred CCccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCC
Q psy5270 2 LYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYN 81 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N 81 (352)
+.+++|.||+|+++.+|+.++.+.+|++|++++|+++++|.+++.|++|++|+++-|++..+|..||.++.|++|||.+|
T Consensus 33 s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levldltyn 112 (264)
T KOG0617|consen 33 SNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVLDLTYN 112 (264)
T ss_pred hhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCchhhhhhcccc
Confidence 34555666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCCCCccccCccCcEEEccCCccccchhhccCcccH
Q psy5270 82 NLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNL 121 (352)
Q Consensus 82 ~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L 121 (352)
++++..+|..|..++.|+.|++++|.|.-+|+.+|++++|
T Consensus 113 nl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~l 152 (264)
T KOG0617|consen 113 NLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNL 152 (264)
T ss_pred ccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcce
Confidence 6665555655555555555555555555555555544443
No 6
>KOG0444|consensus
Probab=99.91 E-value=1.2e-25 Score=209.47 Aligned_cols=277 Identities=23% Similarity=0.299 Sum_probs=200.3
Q ss_pred CCCccEEEeeCCcCc--ccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccc-cCCCCCCCEEE
Q psy5270 1 MLYITRITLSHNKLK--EIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRG-FGAFPVLEVLD 77 (352)
Q Consensus 1 l~~L~~L~Ls~N~l~--~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~ 77 (352)
+++|+.+++.+|++. .||+++..+..|..|||++|++.++|..+..-+++-+|+|++|++.+||.. |-+++.|-+||
T Consensus 77 Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 77 LPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLD 156 (1255)
T ss_pred chhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhc
Confidence 467889999999996 899999999999999999999999999999999999999999999999987 67899999999
Q ss_pred ccCCCCCCCCCCCccccCccCcEEEccCCccccc-hhhccCcccHHHHHHhc-------chhhHhhcC-ceEeecccccc
Q psy5270 78 LTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVL-PAEIGNLKNLQIILETF-------LPDMMEKNR-GHIVGISSMAG 148 (352)
Q Consensus 78 Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~i-p~~~~nl~~L~~L~l~~-------~p~~~~~~~-g~i~~iss~~~ 148 (352)
||+|++. .+|+.+..+..|+.|+|++|.+... -..+..|++|++|.++. +|.-+.... ..-+++ |.+.
T Consensus 157 LS~NrLe--~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDl-S~N~ 233 (1255)
T KOG0444|consen 157 LSNNRLE--MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDL-SENN 233 (1255)
T ss_pred cccchhh--hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccc-cccC
Confidence 9999996 5899999999999999999988622 12444577777776654 221111100 000111 1111
Q ss_pred c-------cCCCCccccccchhhhhhhhHHhH-HHHHHHHhcCCceeecccCcccccCCccCcccccccCC--CcccCCC
Q psy5270 149 I-------VGLPNLVPYCASKFAVRGLMEALA-EELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLS--SLPRGFG 218 (352)
Q Consensus 149 l-------~~lp~l~~~~~s~~~l~~~~~~l~-~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~--~ip~~~~ 218 (352)
+ ..++++..+.++.+.+..+.-... .+-.+.+.++.|+++........++.++.+.+.+|+++ .||.+||
T Consensus 234 Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIG 313 (1255)
T KOG0444|consen 234 LPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSGIG 313 (1255)
T ss_pred CCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCCccchh
Confidence 1 123333344444444432211100 01123455666777665444445666677777778777 7888888
Q ss_pred CCcccchhhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcceecchhhhcccccccccCCceeee
Q psy5270 219 AFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIMLEPRWVIS 288 (352)
Q Consensus 219 ~l~~L~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~~l~~~~~~~~ 288 (352)
.+..| +++..++|++. -.|+.++.+..|+.|.|++|++-++|..|--|+.|++|+...+|-.
T Consensus 314 KL~~L------evf~aanN~LE--lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 314 KLIQL------EVFHAANNKLE--LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hhhhh------HHHHhhccccc--cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCc
Confidence 88777 68888888885 5899999999999999999999999999988888888865555443
No 7
>KOG0472|consensus
Probab=99.91 E-value=9.6e-27 Score=206.74 Aligned_cols=256 Identities=28% Similarity=0.394 Sum_probs=171.2
Q ss_pred ccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCCC
Q psy5270 4 ITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNL 83 (352)
Q Consensus 4 L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l 83 (352)
++.+++++|.++.+-+++.++..|.+|++.+|+++++|++++.+.+++.++.++|+++.+|+.++.+.+|+.++.++|.+
T Consensus 47 l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~ 126 (565)
T KOG0472|consen 47 LQKLILSHNDLEVLREDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNEL 126 (565)
T ss_pred hhhhhhccCchhhccHhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccce
Confidence 55677788887777777777778888888888888888888888888888888888888888888888888888888887
Q ss_pred CCCCCCCccccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchh
Q psy5270 84 NEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKF 163 (352)
Q Consensus 84 ~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~ 163 (352)
.. +|++++.+..|+.++..+|+++.+|+.++++.++..+++.+.. +.... .....+..+.-.++.++
T Consensus 127 ~e--l~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~---------l~~l~--~~~i~m~~L~~ld~~~N 193 (565)
T KOG0472|consen 127 KE--LPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNK---------LKALP--ENHIAMKRLKHLDCNSN 193 (565)
T ss_pred ee--cCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccc---------hhhCC--HHHHHHHHHHhcccchh
Confidence 63 7778888888888888888888888888877777777655310 00000 00000000011111111
Q ss_pred hhhhhhHHhHH-HHHHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCC-CCcccchhhhhhhhhhccccccc
Q psy5270 164 AVRGLMEALAE-ELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFG-AFPVLEAFSFTTILDLTYNNLNE 241 (352)
Q Consensus 164 ~l~~~~~~l~~-~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~-~l~~L~~~~~L~~L~ls~N~l~g 241 (352)
.+..+.+.+.. +-...+++..|++... |.+-....+..++++.|++..+|++.+ ++..+ -+|||+.|++.
T Consensus 194 ~L~tlP~~lg~l~~L~~LyL~~Nki~~l-Pef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l------~vLDLRdNklk- 265 (565)
T KOG0472|consen 194 LLETLPPELGGLESLELLYLRRNKIRFL-PEFPGCSLLKELHVGENQIEMLPAEHLKHLNSL------LVLDLRDNKLK- 265 (565)
T ss_pred hhhcCChhhcchhhhHHHHhhhcccccC-CCCCccHHHHHHHhcccHHHhhHHHHhcccccc------eeeeccccccc-
Confidence 11111111110 0012233334444332 333344455666777888877887765 55555 69999999998
Q ss_pred cCCCchhhhhHHhHhhhCCCCcceecchhhhcccccccccC
Q psy5270 242 QSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIMLE 282 (352)
Q Consensus 242 ~~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~~l~~ 282 (352)
+.|+.++.+.+|++||+|+|.++.+|.++|++ +|.++-.
T Consensus 266 -e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~l 304 (565)
T KOG0472|consen 266 -EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLAL 304 (565)
T ss_pred -cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhh
Confidence 58999999999999999999999999999999 8887733
No 8
>KOG4194|consensus
Probab=99.88 E-value=6.7e-24 Score=196.52 Aligned_cols=265 Identities=26% Similarity=0.303 Sum_probs=158.7
Q ss_pred CCccEEEeeCCcCcccCccccCCCCCCEEEccCCcCccc-ccccCCCCCCcEEEccCCCCCcccc-ccCCCCCCCEEEcc
Q psy5270 2 LYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETL-PTSLSSLPKLRILNLGMNRLSSLPR-GFGAFPVLEVLDLT 79 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~i-p~~l~~L~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~Ls 79 (352)
++|+.+.+.+|.++.||...+...+|+.|+|.+|.++++ .+++.-++.|+.|||+.|.+++||. +|..-.+++.|+|+
T Consensus 102 ~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La 181 (873)
T KOG4194|consen 102 PNLQEVNLNKNELTRIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLA 181 (873)
T ss_pred CcceeeeeccchhhhcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeec
Confidence 455555666666666665544444566666666666544 3355666667777777777776654 35555678888888
Q ss_pred CCCCCCCCCCCccccCccCcEEEccCCccccchh-hccCcccHHHHHHhcchhhHhhcCceEeeccccccccCC------
Q psy5270 80 YNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA-EIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGL------ 152 (352)
Q Consensus 80 ~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~-~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~l------ 152 (352)
+|+++. .--..|.++.+|..|.|+.|+++.+|. .|.++..|+.|++.. +..+++....+.++..+
T Consensus 182 ~N~It~-l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnr-------N~irive~ltFqgL~Sl~nlklq 253 (873)
T KOG4194|consen 182 SNRITT-LETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNR-------NRIRIVEGLTFQGLPSLQNLKLQ 253 (873)
T ss_pred cccccc-cccccccccchheeeecccCcccccCHHHhhhcchhhhhhccc-------cceeeehhhhhcCchhhhhhhhh
Confidence 888875 234567888888888888888888776 677788888887754 22233322222222221
Q ss_pred ---------------CCccccccchhhhhhhhHHhHHHHH--HHHhcCCceeecccCc-ccccCCccCcccccccCCCcc
Q psy5270 153 ---------------PNLVPYCASKFAVRGLMEALAEELR--EDARNSKIKFTSIFPF-MVDTGLCKNPKIKMNRLSSLP 214 (352)
Q Consensus 153 ---------------p~l~~~~~s~~~l~~~~~~l~~~l~--~~~~~~~n~~~g~~P~-~~~~~~l~~l~l~~n~l~~ip 214 (352)
..+....+..+.+....+.+...+. +.++++.|.+.-+.+. |--+..++.++|++|+++.+|
T Consensus 254 rN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~ 333 (873)
T KOG4194|consen 254 RNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLD 333 (873)
T ss_pred hcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCC
Confidence 1122222333333333333332222 4555666666655443 223455666777777777776
Q ss_pred cCCCCCcccchhhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcce-ecchh---hhcccccccc
Q psy5270 215 RGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAE---IGNLKNLQIM 280 (352)
Q Consensus 215 ~~~~~l~~L~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~-~iP~~---l~~l~~L~~l 280 (352)
++ ++..+..|+.|+|++|.++. .--..|..+++|++|||++|.++ .|.+. +..|++|+.|
T Consensus 334 ~~-----sf~~L~~Le~LnLs~Nsi~~-l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL 397 (873)
T KOG4194|consen 334 EG-----SFRVLSQLEELNLSHNSIDH-LAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKL 397 (873)
T ss_pred hh-----HHHHHHHhhhhcccccchHH-HHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhe
Confidence 54 34444455778888888774 23445777788888888888887 66433 5556666666
No 9
>KOG4194|consensus
Probab=99.85 E-value=3.1e-22 Score=185.56 Aligned_cols=310 Identities=21% Similarity=0.240 Sum_probs=213.7
Q ss_pred CccEEEeeCCcCcccCc-cccCCCCCCEEEccCCcCccccc-ccCCCCCCcEEEccCCCCCcccc-ccCCCCCCCEEEcc
Q psy5270 3 YITRITLSHNKLKEIPP-GLANLVNLEILTLFNNQIETLPT-SLSSLPKLRILNLGMNRLSSLPR-GFGAFPVLEVLDLT 79 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~-~l~~l~~L~~L~L~~N~l~~ip~-~l~~L~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~Ls 79 (352)
+|+.|+|.+|.|+++.. ++.-++.|+.|||+.|.+++||. +|..=.++++|+|++|.++++-. .|..+.+|.+|.|+
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLs 205 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLS 205 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecc
Confidence 57888888888887764 57778888888888888887764 56666678888888888887754 47888888888888
Q ss_pred CCCCCCCCCCC-ccccCccCcEEEccCCccccc-hhhccCcccHHHHHHhcchhhHhhcCceE--------eec------
Q psy5270 80 YNNLNEQSLPG-NFFMLETLRALYLGDNDFEVL-PAEIGNLKNLQIILETFLPDMMEKNRGHI--------VGI------ 143 (352)
Q Consensus 80 ~N~l~g~~~p~-~~~~l~~L~~L~l~~N~l~~i-p~~~~nl~~L~~L~l~~~p~~~~~~~g~i--------~~i------ 143 (352)
.|+++. +|. .|.+|++|+.|+|..|++..+ -..|..+.+|+.+.+..+.- .+-.+|.. .++
T Consensus 206 rNritt--Lp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I-~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 206 RNRITT--LPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDI-SKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred cCcccc--cCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCc-ccccCcceeeecccceeecccchhh
Confidence 888885 454 666688888888888888754 33666777777765543100 00001111 111
Q ss_pred -cccccccCCCCccccccchhhhhhhhHHhHHHH--HHHHhcCCceeecccCccc-ccCCccCcccccccCCCcccCCCC
Q psy5270 144 -SSMAGIVGLPNLVPYCASKFAVRGLMEALAEEL--REDARNSKIKFTSIFPFMV-DTGLCKNPKIKMNRLSSLPRGFGA 219 (352)
Q Consensus 144 -ss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l--~~~~~~~~n~~~g~~P~~~-~~~~l~~l~l~~n~l~~ip~~~~~ 219 (352)
-.-+++-+++.+..+..+.+++..+...-.+.- ...++++.|+++..-++.+ .+..++.+.|+.|+++.|-+.
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~--- 359 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEG--- 359 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhh---
Confidence 012345566777777777777765432211111 1456788999988777655 456788899999999877654
Q ss_pred CcccchhhhhhhhhhccccccccCCCc---hhhhhHHhHhhhCCCCcceecchh-hhcccccccccCCceeeeccccccC
Q psy5270 220 FPVLEAFSFTTILDLTYNNLNEQSLPG---NFFMLETLRALYLGDNDFEVLPAE-IGNLKNLQIMLEPRWVISMGSCANG 295 (352)
Q Consensus 220 l~~L~~~~~L~~L~ls~N~l~g~~iP~---~~~~l~~L~~L~Ls~N~l~~iP~~-l~~l~~L~~l~~~~~~~~~~~~~~~ 295 (352)
.+..+.+|+.|||++|.+++ .|-+ .|..|++|+.|+|.+|++..||.. |..+..||.|+.+++++....-.
T Consensus 360 --af~~lssL~~LdLr~N~ls~-~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~n-- 434 (873)
T KOG4194|consen 360 --AFVGLSSLHKLDLRSNELSW-CIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPN-- 434 (873)
T ss_pred --HHHHhhhhhhhcCcCCeEEE-EEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeeccc--
Confidence 23334455899999999998 5543 477899999999999999999865 99999999999888888655433
Q ss_pred CcccccccccccCC--Cccc-ccceecCCCCCCHHHHHHHHHHHHH
Q psy5270 296 GGYYHYSYSVVRGC--DRII-PVDIYVPGCPPTAEALMYGILQLQK 338 (352)
Q Consensus 296 ~~~~~~~~~~~~~~--~~~~-~~~~~~~gcpp~~~~~~~~~~~~~~ 338 (352)
.|..+ ++++ ..+.+++.| -++++.|-+.
T Consensus 435 ---------AFe~m~Lk~Lv~nSssflCDC------ql~Wl~qWl~ 465 (873)
T KOG4194|consen 435 ---------AFEPMELKELVMNSSSFLCDC------QLKWLAQWLY 465 (873)
T ss_pred ---------ccccchhhhhhhcccceEEec------cHHHHHHHHH
Confidence 23322 2222 455677778 3456655443
No 10
>KOG1687|consensus
Probab=99.83 E-value=4.8e-21 Score=143.45 Aligned_cols=75 Identities=87% Similarity=1.573 Sum_probs=73.3
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhhhC
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKILQSWYRR 352 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (352)
+.+.+++|.++.|.|.+++|+|+++|..+.|||+++|+|+++|||||+++|+++|++|+++|++|++.+|-|||+
T Consensus 94 dQMPEpr~VisMGsCangGGyyhysYSvvRGcDriiPVDiYvPGCPPtaEAllygilqLqkKi~R~r~~q~wyr~ 168 (168)
T KOG1687|consen 94 DQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALLYGILQLQKKIKRIRPLQFWYRK 168 (168)
T ss_pred hhCCCCeeEEEecccccCCceEEEEehhhccccceeeeeeecCCCCCCHHHHHHHHHHHHHHHHHhhhhhhhhcC
Confidence 677899999999999999999999999999999999999999999999999999999999999999999999996
No 11
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=2.1e-20 Score=186.22 Aligned_cols=230 Identities=25% Similarity=0.379 Sum_probs=139.1
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCC
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNN 82 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~ 82 (352)
.|+.|+|++|+|+.+|..+. ++|++|++++|+|+.+|..+. .+|+.|+|++|+++.||..+. ++|+.|++++|+
T Consensus 200 ~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~Ls~N~ 273 (754)
T PRK15370 200 QITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATLP--DTIQEMELSINRITELPERLP--SALQSLDLFHNK 273 (754)
T ss_pred CCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChhhh--ccccEEECcCCccCcCChhHh--CCCCEEECcCCc
Confidence 45566666666666665543 356666666666666665443 256666666666666666543 356777777777
Q ss_pred CCCCCCCCccccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccch
Q psy5270 83 LNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASK 162 (352)
Q Consensus 83 l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~ 162 (352)
++. +|..+. .+|+.|++++|+|+.+|..+. .+|+.|+++.+ .+..+|...
T Consensus 274 L~~--LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N------------------~Lt~LP~~l------ 323 (754)
T PRK15370 274 ISC--LPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSN------------------SLTALPETL------ 323 (754)
T ss_pred cCc--cccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCC------------------ccccCCccc------
Confidence 663 566553 367777777777776665443 25555555431 000111100
Q ss_pred hhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhcccccccc
Q psy5270 163 FAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQ 242 (352)
Q Consensus 163 ~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~ 242 (352)
... ...+.+++|.++++ |..+. ..++.+++++|+++.+|..+. +.| +.|++++|+|+
T Consensus 324 ----------~~s-L~~L~Ls~N~Lt~L-P~~l~-~sL~~L~Ls~N~L~~LP~~lp--~~L------~~LdLs~N~Lt-- 380 (754)
T PRK15370 324 ----------PPG-LKTLEAGENALTSL-PASLP-PELQVLDVSKNQITVLPETLP--PTI------TTLDVSRNALT-- 380 (754)
T ss_pred ----------ccc-ceeccccCCccccC-Chhhc-CcccEEECCCCCCCcCChhhc--CCc------CEEECCCCcCC--
Confidence 000 01233455666553 33222 467788899999988887553 344 78999999998
Q ss_pred CCCchhhhhHHhHhhhCCCCcceecchhhhc----ccccccccCCceeeeccccc
Q psy5270 243 SLPGNFFMLETLRALYLGDNDFEVLPAEIGN----LKNLQIMLEPRWVISMGSCA 293 (352)
Q Consensus 243 ~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~----l~~L~~l~~~~~~~~~~~~~ 293 (352)
.+|..+. .+|+.|++++|+|+.+|.++.+ ++.+..+....+++......
T Consensus 381 ~LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls~~tl~ 433 (754)
T PRK15370 381 NLPENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSERTIQ 433 (754)
T ss_pred CCCHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCccHHHHH
Confidence 4788765 4799999999999987776544 45666666666666544433
No 12
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.80 E-value=1.1e-19 Score=180.43 Aligned_cols=238 Identities=26% Similarity=0.280 Sum_probs=132.0
Q ss_pred ccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCCC
Q psy5270 4 ITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNL 83 (352)
Q Consensus 4 L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l 83 (352)
-..||+++|.|+++|+.+.. +|+.|++++|+++.+|.. +++|++|++++|+++.+|... ++|+.|++++|.+
T Consensus 203 ~~~LdLs~~~LtsLP~~l~~--~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~LtsLP~lp---~sL~~L~Ls~N~L 274 (788)
T PRK15387 203 NAVLNVGESGLTTLPDCLPA--HITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLTSLPVLP---PGLLELSIFSNPL 274 (788)
T ss_pred CcEEEcCCCCCCcCCcchhc--CCCEEEccCCcCCCCCCC---CCCCcEEEecCCccCcccCcc---cccceeeccCCch
Confidence 35678888888888887753 678888888888777753 467788888888877776432 3444555555544
Q ss_pred CCCCCCCccc-----------------cCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeecccc
Q psy5270 84 NEQSLPGNFF-----------------MLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSM 146 (352)
Q Consensus 84 ~g~~~p~~~~-----------------~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~ 146 (352)
+. +|..+. ..++|++|++++|+++.+|....+ |..|.+++ ..+.
T Consensus 275 ~~--Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~~Lp~lp~~---L~~L~Ls~---------N~L~----- 335 (788)
T PRK15387 275 TH--LPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSE---LCKLWAYN---------NQLT----- 335 (788)
T ss_pred hh--hhhchhhcCEEECcCCccccccccccccceeECCCCccccCCCCccc---cccccccc---------Cccc-----
Confidence 42 332110 124555666666666555442222 22222221 0000
Q ss_pred ccccCCC-CccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccch
Q psy5270 147 AGIVGLP-NLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEA 225 (352)
Q Consensus 147 ~~l~~lp-~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~ 225 (352)
.+..+| .+..+..+.+.+..+.. .+..+ ..+.+++|++++ +|.. ...+..+++++|+++.+|.... .|
T Consensus 336 -~LP~lp~~Lq~LdLS~N~Ls~LP~-lp~~L-~~L~Ls~N~L~~-LP~l--~~~L~~LdLs~N~Lt~LP~l~s---~L-- 404 (788)
T PRK15387 336 -SLPTLPSGLQELSVSDNQLASLPT-LPSEL-YKLWAYNNRLTS-LPAL--PSGLKELIVSGNRLTSLPVLPS---EL-- 404 (788)
T ss_pred -cccccccccceEecCCCccCCCCC-CCccc-ceehhhcccccc-Cccc--ccccceEEecCCcccCCCCccc---CC--
Confidence 011111 22333333333333211 11111 123344555554 2322 1345667777777777765432 23
Q ss_pred hhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcceecchhhhcccccccccCCceeee
Q psy5270 226 FSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIMLEPRWVIS 288 (352)
Q Consensus 226 ~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~~l~~~~~~~~ 288 (352)
+.|++++|++++ +|... .+|+.|++++|+++.||.+++++++|+.+...++++.
T Consensus 405 ----~~LdLS~N~Lss--IP~l~---~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 405 ----KELMVSGNRLTS--LPMLP---SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred ----CEEEccCCcCCC--CCcch---hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCC
Confidence 577888888874 67543 4577788888888888888888888887765555543
No 13
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.79 E-value=2.2e-19 Score=178.27 Aligned_cols=233 Identities=24% Similarity=0.231 Sum_probs=134.2
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCC-----------------CCCCcEEEccCCCCCcccc
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSS-----------------LPKLRILNLGMNRLSSLPR 65 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~-----------------L~~L~~L~L~~N~l~~ip~ 65 (352)
+|+.|++++|+|+.+|.. +++|++|++++|+++.+|....+ .++|+.|++++|+++.+|.
T Consensus 223 ~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~LtsLP~lp~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt~LP~ 299 (788)
T PRK15387 223 HITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPV 299 (788)
T ss_pred CCCEEEccCCcCCCCCCC---CCCCcEEEecCCccCcccCcccccceeeccCCchhhhhhchhhcCEEECcCCccccccc
Confidence 456666666666666642 34566666666666655532211 1234455555666655554
Q ss_pred ccCCCCCCCEEEccCCCCCCCCCCCccccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeeccc
Q psy5270 66 GFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISS 145 (352)
Q Consensus 66 ~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss 145 (352)
. .++|+.|++++|++++ +|... .+|+.|++++|+++.+|... .+|+.|+++++. +..+..
T Consensus 300 ~---p~~L~~LdLS~N~L~~--Lp~lp---~~L~~L~Ls~N~L~~LP~lp---~~Lq~LdLS~N~---------Ls~LP~ 359 (788)
T PRK15387 300 L---PPGLQELSVSDNQLAS--LPALP---SELCKLWAYNNQLTSLPTLP---SGLQELSVSDNQ---------LASLPT 359 (788)
T ss_pred c---ccccceeECCCCcccc--CCCCc---ccccccccccCccccccccc---cccceEecCCCc---------cCCCCC
Confidence 2 3578888888888875 55422 23555556666665555321 233344333200 000000
Q ss_pred cccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccch
Q psy5270 146 MAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEA 225 (352)
Q Consensus 146 ~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~ 225 (352)
. .+.+..+..+.+.+..+.. .... ...+++++|.++++.+ . ...+..+++++|+++.+|... ..|
T Consensus 360 ---l--p~~L~~L~Ls~N~L~~LP~-l~~~-L~~LdLs~N~Lt~LP~-l--~s~L~~LdLS~N~LssIP~l~---~~L-- 424 (788)
T PRK15387 360 ---L--PSELYKLWAYNNRLTSLPA-LPSG-LKELIVSGNRLTSLPV-L--PSELKELMVSGNRLTSLPMLP---SGL-- 424 (788)
T ss_pred ---C--CcccceehhhccccccCcc-cccc-cceEEecCCcccCCCC-c--ccCCCEEEccCCcCCCCCcch---hhh--
Confidence 0 0011111112222221111 0011 1244567788876432 2 246778899999999998643 233
Q ss_pred hhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcce-ecchhhhccccccc
Q psy5270 226 FSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNLKNLQI 279 (352)
Q Consensus 226 ~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~-~iP~~l~~l~~L~~ 279 (352)
+.|++++|+++ .+|.+++++++|+.|+|++|.|+ .+|..+..+.+...
T Consensus 425 ----~~L~Ls~NqLt--~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l~s~~~ 473 (788)
T PRK15387 425 ----LSLSVYRNQLT--RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPG 473 (788)
T ss_pred ----hhhhhccCccc--ccChHHhhccCCCeEECCCCCCCchHHHHHHHHhcCcc
Confidence 68999999998 69999999999999999999999 88888866655543
No 14
>KOG0618|consensus
Probab=99.78 E-value=2.9e-20 Score=180.64 Aligned_cols=246 Identities=25% Similarity=0.329 Sum_probs=189.4
Q ss_pred CCccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCC
Q psy5270 2 LYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYN 81 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N 81 (352)
++|+.|+.++|.++++-..+ --.+|+++|++.|+++.+|++++.+.+|+.++..+|+|+.+|..+..+++|+.|+...|
T Consensus 219 ~~l~~L~a~~n~l~~~~~~p-~p~nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~n 297 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVHP-VPLNLQYLDISHNNLSNLPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYN 297 (1081)
T ss_pred cchheeeeccCcceeecccc-ccccceeeecchhhhhcchHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhh
Confidence 46888999999988332222 12479999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCccCcEEEccCCccccchhhccCcc--cHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccc
Q psy5270 82 NLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLK--NLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYC 159 (352)
Q Consensus 82 ~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~--~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~ 159 (352)
.+. .+|+..+.+++|+.|+|..|++..+|..+-... .++.+..+. ..+..+| +|.
T Consensus 298 el~--yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~------------------n~l~~lp---~~~ 354 (1081)
T KOG0618|consen 298 ELE--YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSS------------------NKLSTLP---SYE 354 (1081)
T ss_pred hhh--hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhh------------------ccccccc---ccc
Confidence 997 489999999999999999999999988432211 133332221 1111112 111
Q ss_pred cchhhhhhhhHHhHHHHHHHHhcCCceeec-ccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhcccc
Q psy5270 160 ASKFAVRGLMEALAEELREDARNSKIKFTS-IFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNN 238 (352)
Q Consensus 160 ~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g-~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~ 238 (352)
.. .......+.+.+|.++. .+|-......++.++|++|+++++|+. .+..+..|+.|+||+|+
T Consensus 355 e~-----------~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas-----~~~kle~LeeL~LSGNk 418 (1081)
T KOG0618|consen 355 EN-----------NHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPAS-----KLRKLEELEELNLSGNK 418 (1081)
T ss_pred ch-----------hhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHH-----HHhchHHhHHHhcccch
Confidence 00 00111234566788876 466667888899999999999999976 22333344799999999
Q ss_pred ccccCCCchhhhhHHhHhhhCCCCcceecchhhhcccccccccCCceeeecc
Q psy5270 239 LNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIMLEPRWVISMG 290 (352)
Q Consensus 239 l~g~~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~~l~~~~~~~~~~ 290 (352)
++ .+|+++.++..|++|....|++...| ++.++++|++++.+.+.+...
T Consensus 419 L~--~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~ 467 (1081)
T KOG0618|consen 419 LT--TLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEV 467 (1081)
T ss_pred hh--hhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhhh
Confidence 98 69999999999999999999999999 999999999997776655443
No 15
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.77 E-value=6.3e-19 Score=175.77 Aligned_cols=216 Identities=25% Similarity=0.370 Sum_probs=164.4
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCC
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNN 82 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~ 82 (352)
+.+.|+++++.++.+|..+. ++|+.|+|++|+++.+|..+. ++|+.|++++|+|+.+|..+. .+|+.|+|++|+
T Consensus 179 ~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~Ls~N~ 252 (754)
T PRK15370 179 NKTELRLKILGLTTIPACIP--EQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATLP--DTIQEMELSINR 252 (754)
T ss_pred CceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChhhh--ccccEEECcCCc
Confidence 56789999999999998875 489999999999999998765 589999999999999998664 479999999999
Q ss_pred CCCCCCCCccccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccch
Q psy5270 83 LNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASK 162 (352)
Q Consensus 83 l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~ 162 (352)
+. .+|..+. ++|++|++++|+++.+|..+. .+|+.|+++. +.+..+|...
T Consensus 253 L~--~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~------------------N~Lt~LP~~l------ 302 (754)
T PRK15370 253 IT--ELPERLP--SALQSLDLFHNKISCLPENLP--EELRYLSVYD------------------NSIRTLPAHL------ 302 (754)
T ss_pred cC--cCChhHh--CCCCEEECcCCccCccccccC--CCCcEEECCC------------------CccccCcccc------
Confidence 97 4888775 589999999999999988765 3566655543 1111222110
Q ss_pred hhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhcccccccc
Q psy5270 163 FAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQ 242 (352)
Q Consensus 163 ~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~ 242 (352)
.. ....+.+++|+++++ |... ...++.+++++|.++.+|..+. +.| +.|++++|+++
T Consensus 303 ----------p~-sL~~L~Ls~N~Lt~L-P~~l-~~sL~~L~Ls~N~Lt~LP~~l~--~sL------~~L~Ls~N~L~-- 359 (754)
T PRK15370 303 ----------PS-GITHLNVQSNSLTAL-PETL-PPGLKTLEAGENALTSLPASLP--PEL------QVLDVSKNQIT-- 359 (754)
T ss_pred ----------hh-hHHHHHhcCCccccC-Cccc-cccceeccccCCccccCChhhc--Ccc------cEEECCCCCCC--
Confidence 00 113456777888764 3222 2467888999999999997653 344 79999999997
Q ss_pred CCCchhhhhHHhHhhhCCCCcceecchhhhccccccccc
Q psy5270 243 SLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIML 281 (352)
Q Consensus 243 ~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~~l~ 281 (352)
.+|..+. ++|++|+|++|+|+.+|..+.. .|+.++
T Consensus 360 ~LP~~lp--~~L~~LdLs~N~Lt~LP~~l~~--sL~~Ld 394 (754)
T PRK15370 360 VLPETLP--PTITTLDVSRNALTNLPENLPA--ALQIMQ 394 (754)
T ss_pred cCChhhc--CCcCEEECCCCcCCCCCHhHHH--HHHHHh
Confidence 4887764 6899999999999999988753 455553
No 16
>KOG0532|consensus
Probab=99.72 E-value=1.9e-19 Score=166.78 Aligned_cols=67 Identities=28% Similarity=0.525 Sum_probs=55.2
Q ss_pred cccccCCCcccCCCCCcccchhhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcceecchhhhcccccccc
Q psy5270 205 IKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIM 280 (352)
Q Consensus 205 l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~~l 280 (352)
+..|++..+|++++.++- ..||+|.|+++ .||-+|.+|+.|++|-|.+|-|..-|+.|.-..++-++
T Consensus 196 vrRn~l~~lp~El~~LpL-------i~lDfScNkis--~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIF 262 (722)
T KOG0532|consen 196 VRRNHLEDLPEELCSLPL-------IRLDFSCNKIS--YLPVDFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIF 262 (722)
T ss_pred HhhhhhhhCCHHHhCCce-------eeeecccCcee--ecchhhhhhhhheeeeeccCCCCCChHHHHhccceeee
Confidence 445777888888886654 47999999998 69999999999999999999999999988665555544
No 17
>KOG4237|consensus
Probab=99.71 E-value=3.4e-19 Score=158.64 Aligned_cols=265 Identities=25% Similarity=0.273 Sum_probs=182.7
Q ss_pred CccEEEeeCCcCcccCcc-ccCCCCCCEEEccCCcCccc-ccccCCCCCCcEEEccC-CCCCccccc-cCCCCCCCEEEc
Q psy5270 3 YITRITLSHNKLKEIPPG-LANLVNLEILTLFNNQIETL-PTSLSSLPKLRILNLGM-NRLSSLPRG-FGAFPVLEVLDL 78 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~-l~~l~~L~~L~L~~N~l~~i-p~~l~~L~~L~~L~L~~-N~l~~ip~~-~~~l~~L~~L~L 78 (352)
.-+.++|..|+|+.||+. |+.+.+|+.|||++|.++.| |+.|..+.+|..|-+.+ |+|+.+|.. |+++.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 356899999999999975 88999999999999999977 88999999987776655 999999986 899999999999
Q ss_pred cCCCCCCCCCCCccccCccCcEEEccCCccccchh-hccCcccHHHHHHhcchh-------hHhhcCceEeecccccccc
Q psy5270 79 TYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA-EIGNLKNLQIILETFLPD-------MMEKNRGHIVGISSMAGIV 150 (352)
Q Consensus 79 s~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~-~~~nl~~L~~L~l~~~p~-------~~~~~~g~i~~iss~~~l~ 150 (352)
.-|++.- ...+.|..+++|..|.+.+|.+..|+. .+..+.+++.+.++..|. |..... ...... .+
T Consensus 148 Nan~i~C-ir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~--a~~~ie---ts 221 (498)
T KOG4237|consen 148 NANHINC-IRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDL--AMNPIE---TS 221 (498)
T ss_pred Chhhhcc-hhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHH--hhchhh---cc
Confidence 9999987 556789999999999999999999988 888899999888776441 111100 000000 11
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHH--hcCC-ceeecccCc--ccccCCccCcccccccCCCccc-CCCCCcccc
Q psy5270 151 GLPNLVPYCASKFAVRGLMEALAEELREDA--RNSK-IKFTSIFPF--MVDTGLCKNPKIKMNRLSSLPR-GFGAFPVLE 224 (352)
Q Consensus 151 ~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~--~~~~-n~~~g~~P~--~~~~~~l~~l~l~~n~l~~ip~-~~~~l~~L~ 224 (352)
+..-...|......+...-..-..+..+.+ +.+. -..-++.|. +-.++.+..+++++|+++.|-+ .|..+..+
T Consensus 222 garc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l- 300 (498)
T KOG4237|consen 222 GARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAEL- 300 (498)
T ss_pred cceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhh-
Confidence 111112222222222211111111110000 1111 122233442 2256678888999999997754 44444444
Q ss_pred hhhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcce-ecchhhhcccccccc
Q psy5270 225 AFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNLKNLQIM 280 (352)
Q Consensus 225 ~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~-~iP~~l~~l~~L~~l 280 (352)
+.|.|..|++.. .--..|.+++.|++|+|.+|+++ .-|-.|..+.+|..+
T Consensus 301 -----~eL~L~~N~l~~-v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l 351 (498)
T KOG4237|consen 301 -----QELYLTRNKLEF-VSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTL 351 (498)
T ss_pred -----hhhhcCcchHHH-HHHHhhhccccceeeeecCCeeEEEecccccccceeeee
Confidence 789999999975 33556889999999999999999 668778877777766
No 18
>KOG0617|consensus
Probab=99.70 E-value=8.8e-19 Score=139.62 Aligned_cols=168 Identities=33% Similarity=0.508 Sum_probs=120.1
Q ss_pred ccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCCCCCCCCCCccccCccCcE
Q psy5270 21 LANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRA 100 (352)
Q Consensus 21 l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~ 100 (352)
+.++++.+.|.|++|+++.+|+.+..+.+|++|++.+|+++++|.+++.+++|+.|+++-|++. .+|..||.++.|+.
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~--~lprgfgs~p~lev 106 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN--ILPRGFGSFPALEV 106 (264)
T ss_pred ccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh--cCccccCCCchhhh
Confidence 3455556666666666666666666666666666666666666666666666666666666664 35666666666666
Q ss_pred EEccCCccc--cchhhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHH
Q psy5270 101 LYLGDNDFE--VLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELRE 178 (352)
Q Consensus 101 L~l~~N~l~--~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~ 178 (352)
||+..|+++ .+|..|..++.|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlr-------------------------------------------------------- 130 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLR-------------------------------------------------------- 130 (264)
T ss_pred hhccccccccccCCcchhHHHHHH--------------------------------------------------------
Confidence 666666665 3454433333332
Q ss_pred HHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhccccccccCCCchhhhhHHhHhhh
Q psy5270 179 DARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALY 258 (352)
Q Consensus 179 ~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~ 258 (352)
.++++.|.|.-+|.++|.+++| +.|.+..|.+- ++|..++.|+.|+.|.
T Consensus 131 -----------------------alyl~dndfe~lp~dvg~lt~l------qil~lrdndll--~lpkeig~lt~lrelh 179 (264)
T KOG0617|consen 131 -----------------------ALYLGDNDFEILPPDVGKLTNL------QILSLRDNDLL--SLPKEIGDLTRLRELH 179 (264)
T ss_pred -----------------------HHHhcCCCcccCChhhhhhcce------eEEeeccCchh--hCcHHHHHHHHHHHHh
Confidence 3456678899999999999999 69999999997 6999999999999999
Q ss_pred CCCCcceecchhhhccccc
Q psy5270 259 LGDNDFEVLPAEIGNLKNL 277 (352)
Q Consensus 259 Ls~N~l~~iP~~l~~l~~L 277 (352)
+.+|+++.+|++++++.-+
T Consensus 180 iqgnrl~vlppel~~l~l~ 198 (264)
T KOG0617|consen 180 IQGNRLTVLPPELANLDLV 198 (264)
T ss_pred cccceeeecChhhhhhhhh
Confidence 9999999999999988654
No 19
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.70 E-value=1e-16 Score=169.44 Aligned_cols=122 Identities=25% Similarity=0.335 Sum_probs=97.3
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCC-CCccccccCCCCCCCEEEccCC
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNR-LSSLPRGFGAFPVLEVLDLTYN 81 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~-l~~ip~~~~~l~~L~~L~Ls~N 81 (352)
+|+.|++.++.++.+|..+ ...+|++|++.+|++..+|..+..+++|+.|+|+++. +..+|. ++.+++|+.|++++|
T Consensus 590 ~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c 667 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDC 667 (1153)
T ss_pred ccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCC
Confidence 5788888888888888887 4678899999998888888888888889999998764 557774 788888999999887
Q ss_pred CCCCCCCCCccccCccCcEEEccCC-ccccchhhccCcccHHHHHHhc
Q psy5270 82 NLNEQSLPGNFFMLETLRALYLGDN-DFEVLPAEIGNLKNLQIILETF 128 (352)
Q Consensus 82 ~l~g~~~p~~~~~l~~L~~L~l~~N-~l~~ip~~~~nl~~L~~L~l~~ 128 (352)
.... .+|.+++++++|+.|++++| .++.+|..+ ++++|+.|.++.
T Consensus 668 ~~L~-~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsg 713 (1153)
T PLN03210 668 SSLV-ELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSG 713 (1153)
T ss_pred CCcc-ccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCC
Confidence 7555 68888888888999999886 466788765 667777666554
No 20
>KOG0618|consensus
Probab=99.67 E-value=9.2e-19 Score=170.29 Aligned_cols=74 Identities=30% Similarity=0.372 Sum_probs=60.1
Q ss_pred CccCcccccccCCCcccCCCCCcccchhhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcceecchhhhcccccc
Q psy5270 199 LCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQ 278 (352)
Q Consensus 199 ~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~ 278 (352)
.++.++++.|+++.+|++++.+.++ +.++..+|+|+ .+|..+...++|+.|+..+|.++-||+..+.+++|+
T Consensus 242 nl~~~dis~n~l~~lp~wi~~~~nl------e~l~~n~N~l~--~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~ 313 (1081)
T KOG0618|consen 242 NLQYLDISHNNLSNLPEWIGACANL------EALNANHNRLV--ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLR 313 (1081)
T ss_pred cceeeecchhhhhcchHHHHhcccc------eEecccchhHH--hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceee
Confidence 4667788999999999888888887 57888888885 578888888888888888888888888777777777
Q ss_pred cc
Q psy5270 279 IM 280 (352)
Q Consensus 279 ~l 280 (352)
.|
T Consensus 314 tL 315 (1081)
T KOG0618|consen 314 TL 315 (1081)
T ss_pred ee
Confidence 76
No 21
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.66 E-value=2.7e-16 Score=166.27 Aligned_cols=125 Identities=22% Similarity=0.309 Sum_probs=107.3
Q ss_pred CCCccEEEeeCCc------Cc-ccCccccCCC-CCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCC
Q psy5270 1 MLYITRITLSHNK------LK-EIPPGLANLV-NLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPV 72 (352)
Q Consensus 1 l~~L~~L~Ls~N~------l~-~ip~~l~~l~-~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~ 72 (352)
|++|+.|.+..+. +. .+|.++..++ +|+.|++.+|.+..+|..+ ...+|+.|++++|++..+|.++..+++
T Consensus 557 m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~~~~l~~ 635 (1153)
T PLN03210 557 MRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDGVHSLTG 635 (1153)
T ss_pred CccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccccccCCC
Confidence 5788999987653 34 5788887764 6999999999999999887 578999999999999999999999999
Q ss_pred CCEEEccCCCCCCCCCCCccccCccCcEEEccCCc-cccchhhccCcccHHHHHHhc
Q psy5270 73 LEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDND-FEVLPAEIGNLKNLQIILETF 128 (352)
Q Consensus 73 L~~L~Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~-l~~ip~~~~nl~~L~~L~l~~ 128 (352)
|+.|+|++|...+ .+|. ++.+++|+.|++++|. +..+|.+++++++|+.|+++.
T Consensus 636 Lk~L~Ls~~~~l~-~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~ 690 (1153)
T PLN03210 636 LRNIDLRGSKNLK-EIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSR 690 (1153)
T ss_pred CCEEECCCCCCcC-cCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCC
Confidence 9999999886544 5774 8889999999999976 569999999999999888765
No 22
>KOG0532|consensus
Probab=99.61 E-value=2.4e-17 Score=152.98 Aligned_cols=194 Identities=29% Similarity=0.433 Sum_probs=161.6
Q ss_pred EEEeeCCcCcccCcc--ccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCCC
Q psy5270 6 RITLSHNKLKEIPPG--LANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNL 83 (352)
Q Consensus 6 ~L~Ls~N~l~~ip~~--l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l 83 (352)
+|.|++-.+.++|.. =-.++.-...||+.|+|.++|..++.+..|+.+.|..|.+-.||+.++++..|++|||+.|++
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~Nql 133 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQL 133 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchh
Confidence 355666667666643 234666778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchh
Q psy5270 84 NEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKF 163 (352)
Q Consensus 84 ~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~ 163 (352)
+ .+|..++.|+ |+.|-+++|+++.+|+.++....|..++.
T Consensus 134 S--~lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~------------------------------------- 173 (722)
T KOG0532|consen 134 S--HLPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDV------------------------------------- 173 (722)
T ss_pred h--cCChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhh-------------------------------------
Confidence 8 4899999887 99999999999999999986565554433
Q ss_pred hhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhccccccccC
Q psy5270 164 AVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQS 243 (352)
Q Consensus 164 ~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~~ 243 (352)
+.|.+.++|..++.+..+ +.|.++.|++. .
T Consensus 174 ------------------------------------------s~nei~slpsql~~l~sl------r~l~vrRn~l~--~ 203 (722)
T KOG0532|consen 174 ------------------------------------------SKNEIQSLPSQLGYLTSL------RDLNVRRNHLE--D 203 (722)
T ss_pred ------------------------------------------hhhhhhhchHHhhhHHHH------HHHHHhhhhhh--h
Confidence 345666777777777777 79999999997 6
Q ss_pred CCchhhhhHHhHhhhCCCCcceecchhhhcccccccccCCceeeecc
Q psy5270 244 LPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIMLEPRWVISMG 290 (352)
Q Consensus 244 iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~~l~~~~~~~~~~ 290 (352)
+|..++.|+ |..||+|.|+++.||.+|.+|+.|+++...++|....
T Consensus 204 lp~El~~Lp-Li~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 204 LPEELCSLP-LIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred CCHHHhCCc-eeeeecccCceeecchhhhhhhhheeeeeccCCCCCC
Confidence 899999554 8999999999999999999999999997667666544
No 23
>COG0377 NuoB NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion]
Probab=99.56 E-value=4.8e-15 Score=117.94 Aligned_cols=65 Identities=68% Similarity=1.316 Sum_probs=63.6
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKR 342 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~ 342 (352)
+.+.+++|.++.|.|.+.+|.|..+|+.+.|+|.++|+|+++|||||+|+|+++|+.++++|+++
T Consensus 98 dQMPePK~VIsMGsCa~~GG~f~~sYsvV~g~D~~vPVDvyIPGCPPrPEAl~~gi~~Lq~KI~~ 162 (194)
T COG0377 98 DQMPEPKWVISMGSCANSGGMYWNSYSVVQGVDRVVPVDVYIPGCPPRPEALLYGILLLQEKIRR 162 (194)
T ss_pred HhCCCCcEEEEecccccCCCcccccceeeeccceeEeeeeecCCCCCCHHHHHHHHHHHHHHHHh
Confidence 77899999999999999999999999999999999999999999999999999999999999998
No 24
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.52 E-value=7.8e-15 Score=138.70 Aligned_cols=197 Identities=30% Similarity=0.428 Sum_probs=146.8
Q ss_pred EEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCC-CCcEEEccCCCCCccccccCCCCCCCEEEccCCCCC
Q psy5270 6 RITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLP-KLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNLN 84 (352)
Q Consensus 6 ~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~-~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~ 84 (352)
.++++.|.+..-+..+..++.++.|++.+|.++.+|+..+.+. +|+.|++++|++..+|..++.+++|+.|++++|+++
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~ 176 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS 176 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhh
Confidence 4677777765444445566789999999999999988888885 899999999999999888899999999999999997
Q ss_pred CCCCCCccccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhh
Q psy5270 85 EQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFA 164 (352)
Q Consensus 85 g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~ 164 (352)
. +|...+.+++|+.|++++|+++.+|..++....|+.+.++..+ +.
T Consensus 177 ~--l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~---------~~----------------------- 222 (394)
T COG4886 177 D--LPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNS---------II----------------------- 222 (394)
T ss_pred h--hhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCc---------ce-----------------------
Confidence 4 7888778889999999999999999887767778777666411 00
Q ss_pred hhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhccccccccCC
Q psy5270 165 VRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSL 244 (352)
Q Consensus 165 l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~~i 244 (352)
...........+..+.+.+|++..+|..++.+..+ +.|++++|.++ .+
T Consensus 223 ------------------------~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l------~~L~~s~n~i~--~i 270 (394)
T COG4886 223 ------------------------ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNL------ETLDLSNNQIS--SI 270 (394)
T ss_pred ------------------------ecchhhhhcccccccccCCceeeeccchhcccccc------ceecccccccc--cc
Confidence 00000011222333446677777667777777776 68899999987 45
Q ss_pred CchhhhhHHhHhhhCCCCcceecch
Q psy5270 245 PGNFFMLETLRALYLGDNDFEVLPA 269 (352)
Q Consensus 245 P~~~~~l~~L~~L~Ls~N~l~~iP~ 269 (352)
+. ++.+..++.||+++|.++.++.
T Consensus 271 ~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 271 SS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred cc-ccccCccCEEeccCccccccch
Confidence 65 8888889999999998884443
No 25
>KOG4237|consensus
Probab=99.51 E-value=9.5e-16 Score=136.83 Aligned_cols=260 Identities=22% Similarity=0.242 Sum_probs=155.8
Q ss_pred EEeeCCcCcccCccccCCCCCCEEEccCCcCccccc-ccCCCCCCcEEEccCCCCCcc-ccccCCCCCCCEEEccC-CCC
Q psy5270 7 ITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPT-SLSSLPKLRILNLGMNRLSSL-PRGFGAFPVLEVLDLTY-NNL 83 (352)
Q Consensus 7 L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~-~l~~L~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~Ls~-N~l 83 (352)
.|-++-.+++||..+.- ....++|..|+++.||+ +|+.+++|+.|||++|+|+.| |..|.++.+|..|-+.+ |+|
T Consensus 51 VdCr~~GL~eVP~~LP~--~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPP--ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EEccCCCcccCcccCCC--cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 45666778889987754 67899999999998876 899999999999999999977 67799999887766655 999
Q ss_pred CCCCCCC-ccccCccCcEEEccCCccccch-hhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccc
Q psy5270 84 NEQSLPG-NFFMLETLRALYLGDNDFEVLP-AEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCAS 161 (352)
Q Consensus 84 ~g~~~p~-~~~~l~~L~~L~l~~N~l~~ip-~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s 161 (352)
+. +|. .|++|.+|+.|.+.-|++.-++ ..|..++++..|.+..... +.+.- ..+.++.........
T Consensus 129 ~~--l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~-------q~i~~---~tf~~l~~i~tlhlA 196 (498)
T KOG4237|consen 129 TD--LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKI-------QSICK---GTFQGLAAIKTLHLA 196 (498)
T ss_pred hh--hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhh-------hhhcc---ccccchhccchHhhh
Confidence 85 665 7899999999999999999554 4778888877665543110 00000 011111111111111
Q ss_pred hhhhhh--hhHHhHHHHH------------HHHhcCCceeecccCcccccC--Cc-cCcccccccCCCccc-CCCCCccc
Q psy5270 162 KFAVRG--LMEALAEELR------------EDARNSKIKFTSIFPFMVDTG--LC-KNPKIKMNRLSSLPR-GFGAFPVL 223 (352)
Q Consensus 162 ~~~l~~--~~~~l~~~l~------------~~~~~~~n~~~g~~P~~~~~~--~l-~~l~l~~n~l~~ip~-~~~~l~~L 223 (352)
++.+.. ..+.++..+. .-.++...++..+-+.-+... .+ ..+..+.+-...-|. .|..+++|
T Consensus 197 ~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L 276 (498)
T KOG4237|consen 197 QNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNL 276 (498)
T ss_pred cCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccc
Confidence 111000 0000000000 000011111111111100000 00 000111111112221 24444555
Q ss_pred chhhhhhhhhhccccccccCCCchhhhhHHhHhhhCCCCcceecchh-hhcccccccccCCceee
Q psy5270 224 EAFSFTTILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAE-IGNLKNLQIMLEPRWVI 287 (352)
Q Consensus 224 ~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~~iP~~-l~~l~~L~~l~~~~~~~ 287 (352)
+.|+|++|++++ .-+.+|..+.+++.|+|..|++..+-.. |.++..|+.|..-.+.+
T Consensus 277 ------~~lnlsnN~i~~-i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~i 334 (498)
T KOG4237|consen 277 ------RKLNLSNNKITR-IEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQI 334 (498)
T ss_pred ------eEeccCCCccch-hhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCee
Confidence 899999999998 5788999999999999999999966554 78888888874333333
No 26
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.43 E-value=6.3e-14 Score=132.49 Aligned_cols=182 Identities=32% Similarity=0.458 Sum_probs=146.2
Q ss_pred CCccEEEeeCCcCcccCccccCCC-CCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccC
Q psy5270 2 LYITRITLSHNKLKEIPPGLANLV-NLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTY 80 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~l~~l~-~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~ 80 (352)
+.++.|++.+|.+++||+..+.+. +|++|++++|++..+|..++.+++|+.|++++|+++.+|...+..++|+.|++++
T Consensus 116 ~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~ls~ 195 (394)
T COG4886 116 TNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLDLSG 195 (394)
T ss_pred cceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhhhhhhhhhhhhhhhheeccC
Confidence 468899999999999999998885 9999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCCCCCCCccccCccCcEEEccCCccccchhhccCcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCcccccc
Q psy5270 81 NNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCA 160 (352)
Q Consensus 81 N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~~~nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~ 160 (352)
|+++ .+|..++.+..|+++++++|....++..+.++.++..+.+..
T Consensus 196 N~i~--~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~-------------------------------- 241 (394)
T COG4886 196 NKIS--DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSN-------------------------------- 241 (394)
T ss_pred Cccc--cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCC--------------------------------
Confidence 9998 589988888889999999998777778888877776654322
Q ss_pred chhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhcccccc
Q psy5270 161 SKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLN 240 (352)
Q Consensus 161 s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~ 240 (352)
|++....-.......++.+++++|+++.++. ++.+..+ +.||+++|.++
T Consensus 242 ------------------------n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l------~~L~~s~n~~~ 290 (394)
T COG4886 242 ------------------------NKLEDLPESIGNLSNLETLDLSNNQISSISS-LGSLTNL------RELDLSGNSLS 290 (394)
T ss_pred ------------------------ceeeeccchhccccccceecccccccccccc-ccccCcc------CEEeccCcccc
Confidence 1111000000122335677888999988877 6777777 79999999998
Q ss_pred ccCCCchhh
Q psy5270 241 EQSLPGNFF 249 (352)
Q Consensus 241 g~~iP~~~~ 249 (352)
. .+|....
T Consensus 291 ~-~~~~~~~ 298 (394)
T COG4886 291 N-ALPLIAL 298 (394)
T ss_pred c-cchhhhc
Confidence 6 4554443
No 27
>PLN03150 hypothetical protein; Provisional
Probab=99.38 E-value=7.5e-13 Score=131.46 Aligned_cols=105 Identities=28% Similarity=0.443 Sum_probs=77.7
Q ss_pred ccEEEeeCCcCc-ccCccccCCCCCCEEEccCCcCc-ccccccCCCCCCcEEEccCCCCC-ccccccCCCCCCCEEEccC
Q psy5270 4 ITRITLSHNKLK-EIPPGLANLVNLEILTLFNNQIE-TLPTSLSSLPKLRILNLGMNRLS-SLPRGFGAFPVLEVLDLTY 80 (352)
Q Consensus 4 L~~L~Ls~N~l~-~ip~~l~~l~~L~~L~L~~N~l~-~ip~~l~~L~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~Ls~ 80 (352)
++.|+|++|.++ .+|++++++++|+.|+|++|.++ .+|+.++.+++|+.|+|++|+++ .+|+.++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 566777777777 77777777777777777777776 67777777777777777777777 6777777777777777777
Q ss_pred CCCCCCCCCCccccC-ccCcEEEccCCccc
Q psy5270 81 NNLNEQSLPGNFFML-ETLRALYLGDNDFE 109 (352)
Q Consensus 81 N~l~g~~~p~~~~~l-~~L~~L~l~~N~l~ 109 (352)
|+++| .+|..++.+ .++..+++.+|...
T Consensus 500 N~l~g-~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 500 NSLSG-RVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred Ccccc-cCChHHhhccccCceEEecCCccc
Confidence 77777 677777654 35667777777644
No 28
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.38 E-value=6.4e-15 Score=135.04 Aligned_cols=102 Identities=29% Similarity=0.346 Sum_probs=49.9
Q ss_pred EEeeCCcCc--ccCccccCCCCCCEEEccCCcCc-----ccccccCCCCCCcEEEccCCCCCc-------cccccCCCCC
Q psy5270 7 ITLSHNKLK--EIPPGLANLVNLEILTLFNNQIE-----TLPTSLSSLPKLRILNLGMNRLSS-------LPRGFGAFPV 72 (352)
Q Consensus 7 L~Ls~N~l~--~ip~~l~~l~~L~~L~L~~N~l~-----~ip~~l~~L~~L~~L~L~~N~l~~-------ip~~~~~l~~ 72 (352)
|+|..++++ ..+.-+..+.+|++|+++++.++ .++..+...++++.++++++.+.. ++..+.++++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 455555554 33333444445555555555552 234444455555555555554442 1233444555
Q ss_pred CCEEEccCCCCCCCCCCCccccCcc---CcEEEccCCccc
Q psy5270 73 LEVLDLTYNNLNEQSLPGNFFMLET---LRALYLGDNDFE 109 (352)
Q Consensus 73 L~~L~Ls~N~l~g~~~p~~~~~l~~---L~~L~l~~N~l~ 109 (352)
|+.|++++|.+.+ ..+..+..+.+ |++|++++|+++
T Consensus 83 L~~L~l~~~~~~~-~~~~~~~~l~~~~~L~~L~ls~~~~~ 121 (319)
T cd00116 83 LQELDLSDNALGP-DGCGVLESLLRSSSLQELKLNNNGLG 121 (319)
T ss_pred eeEEEccCCCCCh-hHHHHHHHHhccCcccEEEeeCCccc
Confidence 5555555555543 33444444443 555555555554
No 29
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.36 E-value=2.3e-14 Score=131.37 Aligned_cols=211 Identities=23% Similarity=0.241 Sum_probs=133.9
Q ss_pred CCccEEEeeCCcCcc-------cCccccCCCCCCEEEccCCcCc-ccccccCCCCC---CcEEEccCCCCCc-----ccc
Q psy5270 2 LYITRITLSHNKLKE-------IPPGLANLVNLEILTLFNNQIE-TLPTSLSSLPK---LRILNLGMNRLSS-----LPR 65 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~-------ip~~l~~l~~L~~L~L~~N~l~-~ip~~l~~L~~---L~~L~L~~N~l~~-----ip~ 65 (352)
+.+++++++++.+.. ++..+.++++|++|++++|.+. ..+..+..+.+ |++|++++|+++. +..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 468899999987763 3455778889999999999997 45555655555 9999999999872 344
Q ss_pred ccCCC-CCCCEEEccCCCCCCC---CCCCccccCccCcEEEccCCcccc-----chhhccCcccHHHHHHhcchhhHhhc
Q psy5270 66 GFGAF-PVLEVLDLTYNNLNEQ---SLPGNFFMLETLRALYLGDNDFEV-----LPAEIGNLKNLQIILETFLPDMMEKN 136 (352)
Q Consensus 66 ~~~~l-~~L~~L~Ls~N~l~g~---~~p~~~~~l~~L~~L~l~~N~l~~-----ip~~~~nl~~L~~L~l~~~p~~~~~~ 136 (352)
.+..+ ++|+.|++++|.+++. .++..+..+++|++|++++|.++. ++..+...++|+.++++..
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n------- 203 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNN------- 203 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCC-------
Confidence 56677 8999999999999851 234456667789999999999982 3444554455555544431
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccCcccccccCCCc-cc
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSL-PR 215 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~i-p~ 215 (352)
.+.+. ....+... ....+.++.+++++|.++.. ..
T Consensus 204 ---------------------------~i~~~---~~~~l~~~--------------~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 204 ---------------------------GLTDE---GASALAET--------------LASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred ---------------------------ccChH---HHHHHHHH--------------hcccCCCCEEecCCCcCchHHHH
Confidence 00000 00000000 01233556677777776631 11
Q ss_pred CCCC-Ccccchhhhhhhhhhccccccc---cCCCchhhhhHHhHhhhCCCCcce
Q psy5270 216 GFGA-FPVLEAFSFTTILDLTYNNLNE---QSLPGNFFMLETLRALYLGDNDFE 265 (352)
Q Consensus 216 ~~~~-l~~L~~~~~L~~L~ls~N~l~g---~~iP~~~~~l~~L~~L~Ls~N~l~ 265 (352)
.+.. +.. ....|+.|++++|.++. ..+...+..+++|+++++++|.++
T Consensus 240 ~l~~~~~~--~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 240 ALASALLS--PNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHHHHhc--cCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 1110 100 11234788999998862 134455666678899999999998
No 30
>PRK14818 NADH dehydrogenase subunit B; Provisional
Probab=99.27 E-value=8e-12 Score=99.87 Aligned_cols=68 Identities=54% Similarity=1.044 Sum_probs=64.3
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKI 345 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~ 345 (352)
+.+.++++.+..|.|...+|.|..+|+.+.++++++|+|+++|||||.|++++++++++++++++++.
T Consensus 93 eqmPePK~VIA~G~CA~sGGif~~sY~~~~gvd~vIpVDvyIPGCPP~PeaIl~gil~L~~~i~~~~~ 160 (173)
T PRK14818 93 DQMPEPKYVISMGSCSNCGGLFQLGYSVCKGVDKVIPVDVYVPGCPPRPEALTEGLLRLQEIVRSEPW 160 (173)
T ss_pred HhCCCCCEEEEeccccccCCcccCCcccccCCCCccCCcEEccCCCCCHHHHHHHHHHHHHHHhcccc
Confidence 66789999999999999999999999999999999999999999999999999999999999988743
No 31
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.27 E-value=4.6e-12 Score=104.62 Aligned_cols=106 Identities=34% Similarity=0.484 Sum_probs=41.3
Q ss_pred CccEEEeeCCcCcccCcccc-CCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCcccccc-CCCCCCCEEEccC
Q psy5270 3 YITRITLSHNKLKEIPPGLA-NLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGF-GAFPVLEVLDLTY 80 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~-~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~-~~l~~L~~L~Ls~ 80 (352)
++++|+|++|.|+.|. .++ .+++|+.|+|++|.++.++ .+..+++|+.|++++|+++++.+.+ ..+++|+.|++++
T Consensus 20 ~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~ 97 (175)
T PF14580_consen 20 KLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSN 97 (175)
T ss_dssp -----------------S--TT-TT--EEE-TTS--S--T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE-TT
T ss_pred cccccccccccccccc-chhhhhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcC
Confidence 4678889999888774 455 5788899999999888774 4777888999999999998886655 3688899999999
Q ss_pred CCCCCCCCCCccccCccCcEEEccCCcccc
Q psy5270 81 NNLNEQSLPGNFFMLETLRALYLGDNDFEV 110 (352)
Q Consensus 81 N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ 110 (352)
|++....-=..+..+++|+.|++.+|.++.
T Consensus 98 N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 98 NKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp S---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 988752223456677888899999888874
No 32
>KOG1259|consensus
Probab=99.24 E-value=1.6e-12 Score=112.77 Aligned_cols=124 Identities=29% Similarity=0.328 Sum_probs=106.7
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCC
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNN 82 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~ 82 (352)
.|+.+|||+|.|++|..+..-++.++.|++++|.+..+.. +..|++|+.|||++|.++.+--+-..+.+.+.|.|++|.
T Consensus 285 ~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~ 363 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNK 363 (490)
T ss_pred hhhhccccccchhhhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhh
Confidence 5789999999999999998888999999999999997754 889999999999999999776665666778899999998
Q ss_pred CCCCCCCCccccCccCcEEEccCCccccchh--hccCcccHHHHHHhcch
Q psy5270 83 LNEQSLPGNFFMLETLRALYLGDNDFEVLPA--EIGNLKNLQIILETFLP 130 (352)
Q Consensus 83 l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~--~~~nl~~L~~L~l~~~p 130 (352)
+.. -..++.+-+|.+||+++|++..+.+ +||++..|+.+.+..+|
T Consensus 364 iE~---LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 364 IET---LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred Hhh---hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 853 3357788899999999999996654 89999999999877644
No 33
>PLN03150 hypothetical protein; Provisional
Probab=99.20 E-value=1.9e-11 Score=121.44 Aligned_cols=91 Identities=35% Similarity=0.592 Sum_probs=86.3
Q ss_pred CCEEEccCCcCc-ccccccCCCCCCcEEEccCCCCC-ccccccCCCCCCCEEEccCCCCCCCCCCCccccCccCcEEEcc
Q psy5270 27 LEILTLFNNQIE-TLPTSLSSLPKLRILNLGMNRLS-SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLG 104 (352)
Q Consensus 27 L~~L~L~~N~l~-~ip~~l~~L~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~L~l~ 104 (352)
++.|+|++|.++ .+|+.++.+++|+.|+|++|+++ .+|..++.+++|+.|+|++|+++| .+|+.++++++|++|+|+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg-~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNG-SIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCC-CCchHHhcCCCCCEEECc
Confidence 788999999998 88999999999999999999999 899999999999999999999999 899999999999999999
Q ss_pred CCccc-cchhhccCc
Q psy5270 105 DNDFE-VLPAEIGNL 118 (352)
Q Consensus 105 ~N~l~-~ip~~~~nl 118 (352)
+|+++ .+|..+++.
T Consensus 499 ~N~l~g~iP~~l~~~ 513 (623)
T PLN03150 499 GNSLSGRVPAALGGR 513 (623)
T ss_pred CCcccccCChHHhhc
Confidence 99999 899988753
No 34
>PRK14813 NADH dehydrogenase subunit B; Provisional
Probab=99.15 E-value=6.6e-11 Score=96.34 Aligned_cols=69 Identities=52% Similarity=1.014 Sum_probs=61.9
Q ss_pred ccccCCceeeeccccccCCcc-cccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGY-YHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKIL 346 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~~ 346 (352)
+.+..+++.+..|.|...+|. ++.+|+.+.++++++|+|+++|||||+|++++.|++++++++++++..
T Consensus 90 ~qmPePK~VIA~GaCA~sGG~~~~~sY~~~~gvd~vIpVDv~IPGCPP~PeaIl~gl~~l~~~i~~~~~~ 159 (189)
T PRK14813 90 EQMPEPRYVLSMGSCSNCGGPYWEHGYHVLKGVDRIIPVDVYVPGCPPRPEALIGGLMKVQELIRMEQIG 159 (189)
T ss_pred HhCCCCCEEEEecccccCCCCcccCCcccccCCCCccCCcEEccCCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 566889999999999976554 556999999999999999999999999999999999999999988654
No 35
>COG3260 Ni,Fe-hydrogenase III small subunit [Energy production and conversion]
Probab=99.12 E-value=1.3e-10 Score=88.23 Aligned_cols=68 Identities=41% Similarity=0.805 Sum_probs=63.7
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKI 345 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~ 345 (352)
+.+.++++.+..|.|...+|.|.-+|..+++.++++|+|..+|||||+|.+|++++++..+++.++..
T Consensus 72 ea~PePKiViA~GaCa~~GGIf~~~~~v~gpvd~viPVDv~IPGCPP~P~~il~g~~~al~~~~k~~~ 139 (148)
T COG3260 72 EAMPEPKIVIAVGACALSGGIFKDSYSVWGPVDKVIPVDVEIPGCPPRPEAILAGLVAALGKLEKKIH 139 (148)
T ss_pred HhCCCCcEEEEEcccccCCceecccccccccccceeEeeeEcCCCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 67789999999999999999999999999999999999999999999999999999998888877654
No 36
>PRK06411 NADH dehydrogenase subunit B; Validated
Probab=99.06 E-value=2.4e-10 Score=93.37 Aligned_cols=70 Identities=69% Similarity=1.295 Sum_probs=64.6
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKILQ 347 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~~~ 347 (352)
+.+..+.+.+..|.|...+|.+..+|+...|++.++|+|+++|||||.|++++.++..+++|+++++...
T Consensus 97 e~mp~pk~VIA~GaCA~~GGif~~sy~~~~gv~~~ipVDv~IPGCPP~Pe~il~~l~~l~~~i~~~~~~~ 166 (183)
T PRK06411 97 DQMPEPKWVISMGSCANSGGMYHYSYSVVQGVDRIVPVDVYVPGCPPRPEALLYGILKLQKKIRQSERER 166 (183)
T ss_pred HHcCcCCeEEEEecccccCCcccCCCccccCcccccccceEeCCCCCCHHHHHHHHHHHHHHHhcccccc
Confidence 4557899999999999999999888999999999999999999999999999999999999999886653
No 37
>PRK14816 NADH dehydrogenase subunit B; Provisional
Probab=99.04 E-value=2.9e-10 Score=92.24 Aligned_cols=72 Identities=49% Similarity=1.003 Sum_probs=65.9
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhhhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKILQSW 349 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (352)
+.+..+.+.+..|.|+..+|.+..+|+...|+++++|+|+++|||||.|.+++.++..+.+|+++.+-.|-.
T Consensus 104 e~~p~pK~VIAvGsCA~~GGif~~sy~~~~gvd~vIpVDv~IPGCPP~Pe~Il~~l~~L~~ki~~~~~~~~~ 175 (182)
T PRK14816 104 DQMADPKYVIAVGGCAVSGGPFKKSYHVLNGVDKILPVDVYIPGCPPRPEAFYYGMMQLQRKVKIEKFFGGV 175 (182)
T ss_pred HhcCCCCEEEEeccccccCCccccCCccCCCccccccccEEeeCcCCCHHHHHHHHHHHHHHhccccccccc
Confidence 456789999999999999999999999999999999999999999999999999999999999988765543
No 38
>PRK14815 NADH dehydrogenase subunit B; Provisional
Probab=99.04 E-value=3.3e-10 Score=91.84 Aligned_cols=69 Identities=51% Similarity=1.083 Sum_probs=63.2
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKILQ 347 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~~~ 347 (352)
+.+.++++.+..|.|...+|++. +|....|+++++|+|+++|||||.|++++.++.++.+++++.+.++
T Consensus 96 e~~p~pK~VIAvGsCA~~GGi~~-sy~~~~gv~~~ipVDv~IPGCPP~Pe~il~~l~~l~~~i~~~~~~~ 164 (183)
T PRK14815 96 DQMPEPKWVIAMGACASSGGMYR-SYSVLQGVDRILPVDVYISGCPPRPEAILDALIKLQKKIDTERAAR 164 (183)
T ss_pred HhCCCCCEEEEeccccccCCCcc-ccccccCccccccccEEecCCCCCHHHHHHHHHHHHHHHhhccccc
Confidence 56688999999999999999985 8999999999999999999999999999999999999999876554
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.04 E-value=2.2e-10 Score=77.99 Aligned_cols=59 Identities=47% Similarity=0.759 Sum_probs=38.0
Q ss_pred CCccEEEeeCCcCcccCc-cccCCCCCCEEEccCCcCcccc-cccCCCCCCcEEEccCCCC
Q psy5270 2 LYITRITLSHNKLKEIPP-GLANLVNLEILTLFNNQIETLP-TSLSSLPKLRILNLGMNRL 60 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~-~l~~l~~L~~L~L~~N~l~~ip-~~l~~L~~L~~L~L~~N~l 60 (352)
++|++|++++|+++.||+ .|.++++|++|++++|.++.+| ..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456667777776666664 4566667777777777666553 3566666666666666653
No 40
>CHL00023 ndhK NADH dehydrogenase subunit K
Probab=99.03 E-value=3.4e-10 Score=94.26 Aligned_cols=67 Identities=51% Similarity=1.006 Sum_probs=62.6
Q ss_pred ccccCCceeeeccccccCCcccc-cccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYH-YSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMK 344 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~ 344 (352)
+.+.++++.+..|.|+..+|.+. .+|....|+++++|+|+++|||||.|++++.++..+++|+++..
T Consensus 94 eqmPePK~VIA~GaCA~sGGif~~dsy~~v~gvd~vIPVDv~IPGCPP~PeaIi~~l~~L~~ki~~~~ 161 (225)
T CHL00023 94 EQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREI 161 (225)
T ss_pred HhcCCCCeEEEEccccccCCcccCCCcccccCccccceeeEEecCCCCCHHHHHHHHHHHHHHHhccc
Confidence 66789999999999999999996 89999999999999999999999999999999999999988764
No 41
>KOG0531|consensus
Probab=99.03 E-value=1.7e-10 Score=109.75 Aligned_cols=123 Identities=26% Similarity=0.388 Sum_probs=100.6
Q ss_pred CCccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCC
Q psy5270 2 LYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYN 81 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N 81 (352)
..++.+++..|.+.++-..+..+++|+.|++.+|++.++...+..+.+|++|++++|+++.+.. +..++.|+.|++++|
T Consensus 72 ~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~-l~~l~~L~~L~l~~N 150 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEG-LSTLTLLKELNLSGN 150 (414)
T ss_pred HhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccc-hhhccchhhheeccC
Confidence 3466677888888887677888999999999999999887668889999999999999997754 566777999999999
Q ss_pred CCCCCCCCCccccCccCcEEEccCCccccchhh-ccCcccHHHHHHhc
Q psy5270 82 NLNEQSLPGNFFMLETLRALYLGDNDFEVLPAE-IGNLKNLQIILETF 128 (352)
Q Consensus 82 ~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~-~~nl~~L~~L~l~~ 128 (352)
.++. -..+..+.+|+.+++++|+++.++.. ...+.+++.+.++.
T Consensus 151 ~i~~---~~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~ 195 (414)
T KOG0531|consen 151 LISD---ISGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGG 195 (414)
T ss_pred cchh---ccCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccC
Confidence 9975 34566689999999999999977654 56677777776654
No 42
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=8.4e-11 Score=97.12 Aligned_cols=117 Identities=32% Similarity=0.485 Sum_probs=39.2
Q ss_pred eeCCcCcccCccccCCCCCCEEEccCCcCcccccccC-CCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCCCCCCC
Q psy5270 9 LSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLS-SLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQS 87 (352)
Q Consensus 9 Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~-~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~g~~ 87 (352)
|..+.+.++|.. .+...+++|+|.+|.++.|. .++ .+.+|+.||+++|.++.++ .+..++.|+.|++++|+++.
T Consensus 4 lt~~~i~~~~~~-~n~~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~-- 78 (175)
T PF14580_consen 4 LTANMIEQIAQY-NNPVKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISS-- 78 (175)
T ss_dssp ----------------------------------S--TT-TT--EEE-TTS--S--T-T----TT--EEE--SS---S--
T ss_pred cccccccccccc-cccccccccccccccccccc-chhhhhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCc--
Confidence 344555555543 45667999999999999874 566 6889999999999999886 57889999999999999985
Q ss_pred CCCccc-cCccCcEEEccCCccccch--hhccCcccHHHHHHhcch
Q psy5270 88 LPGNFF-MLETLRALYLGDNDFEVLP--AEIGNLKNLQIILETFLP 130 (352)
Q Consensus 88 ~p~~~~-~l~~L~~L~l~~N~l~~ip--~~~~nl~~L~~L~l~~~p 130 (352)
+++.+. .+++|++|++++|++..+- ..+..+++|+.+++..+|
T Consensus 79 i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NP 124 (175)
T PF14580_consen 79 ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNP 124 (175)
T ss_dssp -CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-G
T ss_pred cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCc
Confidence 665553 6899999999999998442 356677777777666544
No 43
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.97 E-value=3.7e-10 Score=76.88 Aligned_cols=57 Identities=47% Similarity=0.754 Sum_probs=27.4
Q ss_pred CCCEEEccCCcCccccc-ccCCCCCCcEEEccCCCCCcccc-ccCCCCCCCEEEccCCC
Q psy5270 26 NLEILTLFNNQIETLPT-SLSSLPKLRILNLGMNRLSSLPR-GFGAFPVLEVLDLTYNN 82 (352)
Q Consensus 26 ~L~~L~L~~N~l~~ip~-~l~~L~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~Ls~N~ 82 (352)
+|++|++++|+++.+|+ .|..+++|++|++++|+++.+|+ .|.++++|+.|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34555555555554432 44445555555555555554433 34444444444444443
No 44
>TIGR01957 nuoB_fam NADH-quinone oxidoreductase, B subunit. This model describes the B chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoB. The quinone is plastoquinone in Synechocystis (where the chain is designated K) and in chloroplast, where NADH may be replaced by NADPH. In the methanogenic archaeal genus Methanosarcina, NADH is replaced by F420H2.
Probab=98.96 E-value=1e-09 Score=86.66 Aligned_cols=65 Identities=68% Similarity=1.349 Sum_probs=60.7
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKR 342 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~ 342 (352)
+.+..+++.+..|.|...+|.+..+|+...++++++|+|+++|||||.|++++.++.++++|+++
T Consensus 80 e~~p~pk~VIA~GsCA~~GGi~~~~y~~~~~v~~~ipVDi~IPGCPp~Pe~i~~~l~~l~~~~~~ 144 (145)
T TIGR01957 80 DQMPEPKWVISMGACANSGGMFHTSYSVVQGVDRIVPVDVYIPGCPPRPEALIYGLIKLQKKIKR 144 (145)
T ss_pred HhccCCceEEEecceeecCCCccCCCccccCcccccccceEeCCCCCCHHHHHHHHHHHHHHhhc
Confidence 45677899999999999999998899999999999999999999999999999999999999875
No 45
>PRK14817 NADH dehydrogenase subunit B; Provisional
Probab=98.96 E-value=9.9e-10 Score=89.06 Aligned_cols=67 Identities=51% Similarity=1.110 Sum_probs=61.4
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKI 345 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~ 345 (352)
+.+..+++.+..|.|...+|++ .+|+...+++.++|+|+++|||||.|++++.++.++++|+++++.
T Consensus 98 e~~p~pK~VIAvGaCA~~GGi~-~~y~~~~gv~~vvpVDv~IPGCPP~Pe~il~~l~~l~~ki~~~~~ 164 (181)
T PRK14817 98 EQMADPKWVMAFGVCASSGGFY-DNYATVQGIDRIIPVDVYVPGCPPRPEQVLDGIMLLQKKIQNQSH 164 (181)
T ss_pred HHcccCCEEEEeccccccCCcC-CCcccccCccccceeeEEecCCCCCHHHHHHHHHHHHHHhhcCCc
Confidence 5567899999999999999987 579999999999999999999999999999999999999997653
No 46
>KOG3207|consensus
Probab=98.93 E-value=3.1e-10 Score=103.16 Aligned_cols=107 Identities=22% Similarity=0.283 Sum_probs=77.7
Q ss_pred ccCCCCCCEEEccCCcCcccc--cccCCCCCCcEEEccCCCCCcc---ccccCCCCCCCEEEccCCCCCCCCCCC-cccc
Q psy5270 21 LANLVNLEILTLFNNQIETLP--TSLSSLPKLRILNLGMNRLSSL---PRGFGAFPVLEVLDLTYNNLNEQSLPG-NFFM 94 (352)
Q Consensus 21 l~~l~~L~~L~L~~N~l~~ip--~~l~~L~~L~~L~L~~N~l~~i---p~~~~~l~~L~~L~Ls~N~l~g~~~p~-~~~~ 94 (352)
-.++.+|++..|.+.....++ .....|++++.|||+.|-|+.+ -.-...+++|+.|+++.|++.- .... .-..
T Consensus 117 Qsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~-~~~s~~~~~ 195 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSN-FISSNTTLL 195 (505)
T ss_pred hhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccC-Cccccchhh
Confidence 456778888888888877554 3567788999999999988733 3335678899999999998864 2222 2234
Q ss_pred CccCcEEEccCCccc--cchhhccCcccHHHHHHhc
Q psy5270 95 LETLRALYLGDNDFE--VLPAEIGNLKNLQIILETF 128 (352)
Q Consensus 95 l~~L~~L~l~~N~l~--~ip~~~~nl~~L~~L~l~~ 128 (352)
++.|+.|.++.+.|+ .+-.....++++..|++..
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~ 231 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEA 231 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhc
Confidence 678899999999998 5555556677777776654
No 47
>PRK14820 NADH dehydrogenase subunit B; Provisional
Probab=98.91 E-value=2.1e-09 Score=87.38 Aligned_cols=65 Identities=52% Similarity=1.112 Sum_probs=59.9
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRM 343 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~ 343 (352)
+.+..+++.+..|.|...+|++ .+|....++++++|+|+++|||||.|++++.++.+++++++++
T Consensus 96 e~~p~pk~VIAvGaCA~~GGi~-~~y~~~~~v~~~ipVDv~IPGCPP~Pe~il~~l~~l~~~i~~~ 160 (180)
T PRK14820 96 LQMAEPRWVVAVGACASSGGIF-DTYSVLQGIDRIIPVDVYVPGCPPRPEQIIDGVMRVQELVKNE 160 (180)
T ss_pred HhcCCCCeEEEEecccccCCcc-ccccccccccccccccEEecCCCCCHHHHHHHHHHHHHHHhhc
Confidence 4557899999999999999998 4788999999999999999999999999999999999999876
No 48
>KOG3207|consensus
Probab=98.89 E-value=2.8e-10 Score=103.49 Aligned_cols=127 Identities=23% Similarity=0.214 Sum_probs=71.6
Q ss_pred CCccEEEeeCCcCcccC--ccccCCCCCCEEEccCCcCccc---ccccCCCCCCcEEEccCCCCCccccc--cCCCCCCC
Q psy5270 2 LYITRITLSHNKLKEIP--PGLANLVNLEILTLFNNQIETL---PTSLSSLPKLRILNLGMNRLSSLPRG--FGAFPVLE 74 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip--~~l~~l~~L~~L~L~~N~l~~i---p~~l~~L~~L~~L~L~~N~l~~ip~~--~~~l~~L~ 74 (352)
++|+...|.+......+ .....|++++.|||+.|-|... -.-...|++|+.|+++.|++...-++ -..++.|+
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 34556666655554333 2455677777777777776632 22345677777777777777622111 22456677
Q ss_pred EEEccCCCCCCCCCCCccccCccCcEEEccCCc-cccchhhccCcccHHHHHHhc
Q psy5270 75 VLDLTYNNLNEQSLPGNFFMLETLRALYLGDND-FEVLPAEIGNLKNLQIILETF 128 (352)
Q Consensus 75 ~L~Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~-l~~ip~~~~nl~~L~~L~l~~ 128 (352)
.|.|+.|.|+...+-.....+++|+.|+|..|. +..--.+...++.|+.|+++.
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~ 255 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSN 255 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccC
Confidence 777777777654444444556677777777774 211111223345566666554
No 49
>KOG1259|consensus
Probab=98.89 E-value=1.9e-10 Score=100.03 Aligned_cols=112 Identities=25% Similarity=0.304 Sum_probs=97.2
Q ss_pred CCCccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccC
Q psy5270 1 MLYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTY 80 (352)
Q Consensus 1 l~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~ 80 (352)
++.++.|++|+|.+.++-. ++.+.+|+.|||++|.++++-.+=.+|-+++.|.|+.|.+.++. .++.+-+|..||+++
T Consensus 306 ~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~iE~LS-GL~KLYSLvnLDl~~ 383 (490)
T KOG1259|consen 306 APKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNKIETLS-GLRKLYSLVNLDLSS 383 (490)
T ss_pred ccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhhHhhhh-hhHhhhhheeccccc
Confidence 3678999999999998766 88999999999999999988776677888999999999998663 478889999999999
Q ss_pred CCCCCCCCCCccccCccCcEEEccCCccccchhh
Q psy5270 81 NNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAE 114 (352)
Q Consensus 81 N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~ 114 (352)
|++....--..+|+++.|+.+.|.+|.++.+|..
T Consensus 384 N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 384 NQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred cchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 9997533455799999999999999999987753
No 50
>KOG4579|consensus
Probab=98.83 E-value=1.3e-10 Score=89.69 Aligned_cols=109 Identities=27% Similarity=0.371 Sum_probs=82.1
Q ss_pred ccEEEeeCCcCcccCcc---ccCCCCCCEEEccCCcCcccccccCCC-CCCcEEEccCCCCCccccccCCCCCCCEEEcc
Q psy5270 4 ITRITLSHNKLKEIPPG---LANLVNLEILTLFNNQIETLPTSLSSL-PKLRILNLGMNRLSSLPRGFGAFPVLEVLDLT 79 (352)
Q Consensus 4 L~~L~Ls~N~l~~ip~~---l~~l~~L~~L~L~~N~l~~ip~~l~~L-~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls 79 (352)
+..+||+++++-.|++. +.....|...+|++|.|..+|+.|... +.++.|+|++|+++.+|+++..++.|+.|+++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~ 108 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLR 108 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccc
Confidence 45677888877766665 334455666688888888888777654 46888888888888888888888888888888
Q ss_pred CCCCCCCCCCCccccCccCcEEEccCCccccchhh
Q psy5270 80 YNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAE 114 (352)
Q Consensus 80 ~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~~ 114 (352)
.|.+.. .|..|..|.+|-.|+..+|.+.+||-.
T Consensus 109 ~N~l~~--~p~vi~~L~~l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 109 FNPLNA--EPRVIAPLIKLDMLDSPENARAEIDVD 141 (177)
T ss_pred cCcccc--chHHHHHHHhHHHhcCCCCccccCcHH
Confidence 888874 677777788888888888888777754
No 51
>PRK14819 NADH dehydrogenase subunit B; Provisional
Probab=98.83 E-value=3.9e-09 Score=89.43 Aligned_cols=74 Identities=49% Similarity=1.012 Sum_probs=63.7
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhh-hhhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKI-LQSWYR 351 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 351 (352)
+.+..+++.+..|.|...+|.+..+|+...+++.++|+|+++|||||.|.+++.++.++++++...+. --.||+
T Consensus 94 eqmP~PK~VIAvGaCA~~GGIf~~sY~v~~gId~vIPVDv~IPGCPP~Pe~Il~gLl~L~~ki~~d~~~Rp~~~~ 168 (264)
T PRK14819 94 NQMPEPRYVISMGACATSGGPFRDGYNVLRGIDLLIPVDVYIPGCPPRPEALLHALMTLQKQIDAQSLGRVRWYG 168 (264)
T ss_pred HhccCCCeEEEEccccccCCccccCCCccCCccccccccEEecCCCCCHHHHHHHHHHHHhhcccccccCccccc
Confidence 55678899999999999999999899999999999999999999999999999999999987754331 224554
No 52
>PRK14814 NADH dehydrogenase subunit B; Provisional
Probab=98.80 E-value=8.3e-09 Score=84.24 Aligned_cols=66 Identities=52% Similarity=1.090 Sum_probs=60.0
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMK 344 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~ 344 (352)
+.+..+.+.+..|.|...+|++. .|....|++.++|+|+++|||||.|.+++.++.++.+++++..
T Consensus 96 eqmp~pk~VIAvGsCA~~GGi~~-~y~~~~gv~~vvpVDv~IPGCPP~Pe~il~~l~~L~~~i~~~~ 161 (186)
T PRK14814 96 DQMAEPKFVISVGACASSGGMFH-TYGVLQGVDRILPVDVYVPGCPPRPEAILDALVKLQTKLKTQG 161 (186)
T ss_pred HhcCCCCeEEEeccccccCCccC-cCCCCcCccccccccEEecCCCCCHHHHHHHHHHHHHHHhccc
Confidence 55678999999999999999986 5888899999999999999999999999999999999988753
No 53
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.66 E-value=2.3e-08 Score=62.69 Aligned_cols=38 Identities=42% Similarity=0.719 Sum_probs=19.9
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCccc
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETL 40 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~i 40 (352)
+|++|++++|+|+.+|+.+++|++|++|++++|+++.+
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCC
Confidence 45555555555555555555555555555555555544
No 54
>KOG4658|consensus
Probab=98.66 E-value=2.6e-08 Score=101.90 Aligned_cols=118 Identities=31% Similarity=0.431 Sum_probs=61.5
Q ss_pred cEEEeeCCcCcccCccccCCCCCCEEEccCCc--Ccccccc-cCCCCCCcEEEccCC-CCCccccccCCCCCCCEEEccC
Q psy5270 5 TRITLSHNKLKEIPPGLANLVNLEILTLFNNQ--IETLPTS-LSSLPKLRILNLGMN-RLSSLPRGFGAFPVLEVLDLTY 80 (352)
Q Consensus 5 ~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~--l~~ip~~-l~~L~~L~~L~L~~N-~l~~ip~~~~~l~~L~~L~Ls~ 80 (352)
+.+.+-+|++..++....+ +.|+.|-+..|. +..++.. |..|+.|++|||++| .+..+|.+++++-+|++|++++
T Consensus 526 rr~s~~~~~~~~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~ 604 (889)
T KOG4658|consen 526 RRMSLMNNKIEHIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSD 604 (889)
T ss_pred eEEEEeccchhhccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccC
Confidence 3444445555555544332 245555555554 3344332 444566666666655 3445666666666666666666
Q ss_pred CCCCCCCCCCccccCccCcEEEccCCccc-cchhhccCcccHHHHH
Q psy5270 81 NNLNEQSLPGNFFMLETLRALYLGDNDFE-VLPAEIGNLKNLQIIL 125 (352)
Q Consensus 81 N~l~g~~~p~~~~~l~~L~~L~l~~N~l~-~ip~~~~nl~~L~~L~ 125 (352)
..++ .+|..++++++|.+|++..+... .+|.....+++|+++.
T Consensus 605 t~I~--~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~ 648 (889)
T KOG4658|consen 605 TGIS--HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLR 648 (889)
T ss_pred CCcc--ccchHHHHHHhhheeccccccccccccchhhhcccccEEE
Confidence 6555 35666666666666666555433 3333344455555443
No 55
>KOG0531|consensus
Probab=98.61 E-value=1.5e-08 Score=96.49 Aligned_cols=102 Identities=27% Similarity=0.412 Sum_probs=78.4
Q ss_pred CCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCCCCCCCCCCccccCccCcEEE
Q psy5270 23 NLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALY 102 (352)
Q Consensus 23 ~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~L~ 102 (352)
.+..++.+.+..|.+.++-..++.+++|+.+++.+|++..+...+..+++|++|++++|.++. + ..+..++.|+.|+
T Consensus 70 ~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~--i-~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITK--L-EGLSTLTLLKELN 146 (414)
T ss_pred HhHhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccchhhhhcchheecccccccc--c-cchhhccchhhhe
Confidence 456677777888888875556788889999999999999887767888999999999999875 2 2466677799999
Q ss_pred ccCCccccchhhccCcccHHHHHHhc
Q psy5270 103 LGDNDFEVLPAEIGNLKNLQIILETF 128 (352)
Q Consensus 103 l~~N~l~~ip~~~~nl~~L~~L~l~~ 128 (352)
+++|.++.++ .+..+..|+.+++++
T Consensus 147 l~~N~i~~~~-~~~~l~~L~~l~l~~ 171 (414)
T KOG0531|consen 147 LSGNLISDIS-GLESLKSLKLLDLSY 171 (414)
T ss_pred eccCcchhcc-CCccchhhhcccCCc
Confidence 9999998664 344466777666654
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.59 E-value=5.6e-08 Score=60.97 Aligned_cols=39 Identities=54% Similarity=0.726 Sum_probs=22.4
Q ss_pred CCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccc
Q psy5270 26 NLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLP 64 (352)
Q Consensus 26 ~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip 64 (352)
+|++|++++|+++.+|+.+++|++|+.|++++|+++.++
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBEG
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCCc
Confidence 456666666666666555666666666666666665443
No 57
>KOG1859|consensus
Probab=98.54 E-value=2.3e-09 Score=103.26 Aligned_cols=124 Identities=27% Similarity=0.293 Sum_probs=98.2
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccc-cCCCCCCCEEEccCC
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRG-FGAFPVLEVLDLTYN 81 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~Ls~N 81 (352)
.|...+.++|.+..+..++.-++.|+.|+|++|+|+++. .+..|++|++|||++|.+..+|.- ...+. |+.|.+++|
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN 242 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNN 242 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhh-heeeeeccc
Confidence 356678888988888888888889999999999999765 788899999999999999988853 34444 999999999
Q ss_pred CCCCCCCCCccccCccCcEEEccCCccccch--hhccCcccHHHHHHhcchh
Q psy5270 82 NLNEQSLPGNFFMLETLRALYLGDNDFEVLP--AEIGNLKNLQIILETFLPD 131 (352)
Q Consensus 82 ~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip--~~~~nl~~L~~L~l~~~p~ 131 (352)
.++. -..+.+|.+|+.||++.|-+++.. .-++.+..|+.|.+..+|-
T Consensus 243 ~l~t---L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 243 ALTT---LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred HHHh---hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 8864 335788999999999999887432 2456677888888776553
No 58
>KOG4579|consensus
Probab=98.53 E-value=4.8e-09 Score=81.22 Aligned_cols=100 Identities=24% Similarity=0.386 Sum_probs=84.7
Q ss_pred CCCEEEccCCcCcccccccC---CCCCCcEEEccCCCCCccccccCC-CCCCCEEEccCCCCCCCCCCCccccCccCcEE
Q psy5270 26 NLEILTLFNNQIETLPTSLS---SLPKLRILNLGMNRLSSLPRGFGA-FPVLEVLDLTYNNLNEQSLPGNFFMLETLRAL 101 (352)
Q Consensus 26 ~L~~L~L~~N~l~~ip~~l~---~L~~L~~L~L~~N~l~~ip~~~~~-l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~L 101 (352)
.+..+||+++++..|++... ....|...+|++|.|..+|+.|.. ++.++.|++++|.++. +|.++..++.|+.|
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisd--vPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISD--VPEELAAMPALRSL 105 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhh--chHHHhhhHHhhhc
Confidence 46778999999887776554 455566779999999999998765 5689999999999984 89999999999999
Q ss_pred EccCCccccchhhccCcccHHHHHHh
Q psy5270 102 YLGDNDFEVLPAEIGNLKNLQIILET 127 (352)
Q Consensus 102 ~l~~N~l~~ip~~~~nl~~L~~L~l~ 127 (352)
+++.|.|...|..|..+.++..|+..
T Consensus 106 Nl~~N~l~~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 106 NLRFNPLNAEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred ccccCccccchHHHHHHHhHHHhcCC
Confidence 99999999999988888888777644
No 59
>PRK13292 trifunctional NADH dehydrogenase I subunit B/C/D; Provisional
Probab=98.50 E-value=1.5e-07 Score=94.44 Aligned_cols=67 Identities=57% Similarity=1.158 Sum_probs=62.5
Q ss_pred ccccCCceeeeccccccCCcccccccccccCCCcccccceecCCCCCCHHHHHHHHHHHHHHHHhhhh
Q psy5270 278 QIMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKI 345 (352)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~~~~~~~~ 345 (352)
+.+..+++.+..|.|++.+|++ .+|+.+.|++.++|+|+++|||||.|++++.++..+++|+++.+.
T Consensus 85 ~~~p~pk~via~G~Ca~~GG~~-~~y~~~~g~~~~ipVDv~iPGCPP~Pe~i~~~i~~l~~~~~~~~~ 151 (788)
T PRK13292 85 EQMAEPKWVISMGSCANSGGMY-DVYSVVQGVNQILPVDVYIPGCPPRPEAFLQGLMLLQEKIRREER 151 (788)
T ss_pred HhCCCCCEEEEecccccCCCCc-CccccccCcCCcccccEEccCCCCCHHHHHHHHHHHHHHhhcCcc
Confidence 6678999999999999999998 689999999999999999999999999999999999999987664
No 60
>KOG1859|consensus
Probab=98.45 E-value=4.2e-09 Score=101.44 Aligned_cols=105 Identities=33% Similarity=0.459 Sum_probs=87.7
Q ss_pred CCccEEEeeCCcCcccCccccCCCCCCEEEccCCcCccccc-ccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccC
Q psy5270 2 LYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPT-SLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTY 80 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~-~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~ 80 (352)
+.|+.|||++|+++.+- .+..|+.|++|||++|++..+|. ....+. |+.|.+++|-++++- ++.++.+|+.||+++
T Consensus 187 ~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~-gie~LksL~~LDlsy 263 (1096)
T KOG1859|consen 187 PALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR-GIENLKSLYGLDLSY 263 (1096)
T ss_pred HHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh-hHHhhhhhhccchhH
Confidence 56889999999999665 77889999999999999998886 444454 999999999999774 478999999999999
Q ss_pred CCCCCCCCCCccccCccCcEEEccCCccc
Q psy5270 81 NNLNEQSLPGNFFMLETLRALYLGDNDFE 109 (352)
Q Consensus 81 N~l~g~~~p~~~~~l~~L~~L~l~~N~l~ 109 (352)
|-+.+-.--..++.|..|+.|+|.+|.+-
T Consensus 264 Nll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 264 NLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99987222234677889999999999984
No 61
>KOG1909|consensus
Probab=98.44 E-value=6.6e-08 Score=85.99 Aligned_cols=124 Identities=27% Similarity=0.352 Sum_probs=66.8
Q ss_pred CCccEEEeeCCcCc-ccCcc----ccCCCCCCEEEccCCcCcccc--------------cccCCCCCCcEEEccCCCCCc
Q psy5270 2 LYITRITLSHNKLK-EIPPG----LANLVNLEILTLFNNQIETLP--------------TSLSSLPKLRILNLGMNRLSS 62 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~-~ip~~----l~~l~~L~~L~L~~N~l~~ip--------------~~l~~L~~L~~L~L~~N~l~~ 62 (352)
++|++||||+|-|. .-++. +.+++.|++|+|.+|.+...- .-.++=++|+++..+.|.+..
T Consensus 92 ~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 92 PKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred CceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccccc
Confidence 35667777777665 32222 455666777777777665221 112344556677777776653
Q ss_pred cc-----cccCCCCCCCEEEccCCCCCCCC---CCCccccCccCcEEEccCCccc-----cchhhccCcccHHHHH
Q psy5270 63 LP-----RGFGAFPVLEVLDLTYNNLNEQS---LPGNFFMLETLRALYLGDNDFE-----VLPAEIGNLKNLQIIL 125 (352)
Q Consensus 63 ip-----~~~~~l~~L~~L~Ls~N~l~g~~---~p~~~~~l~~L~~L~l~~N~l~-----~ip~~~~nl~~L~~L~ 125 (352)
-+ ..|...+.|+.+.++.|.+.... +-..+..+++|++|||.+|-|+ .+-..+..++.|+.+.
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELN 247 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeec
Confidence 22 23445566677777776653200 1123456667777777777766 1233444444444443
No 62
>KOG4658|consensus
Probab=98.40 E-value=1.3e-07 Score=96.88 Aligned_cols=122 Identities=33% Similarity=0.491 Sum_probs=99.0
Q ss_pred CCccEEEeeCCc--CcccCcc-ccCCCCCCEEEccCCc-CcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEE
Q psy5270 2 LYITRITLSHNK--LKEIPPG-LANLVNLEILTLFNNQ-IETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLD 77 (352)
Q Consensus 2 ~~L~~L~Ls~N~--l~~ip~~-l~~l~~L~~L~L~~N~-l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~ 77 (352)
+.|+.|-+..|. +..++.+ |..++.|++|||++|. +.++|.+++.|-+|++|++++..++.+|.+++++.+|.+|+
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGISHLPSGLGNLKKLIYLN 624 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCccccchHHHHHHhhheec
Confidence 467888888886 5677765 6779999999999985 56999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccccCccCcEEEccCCccc---cchhhccCcccHHHH
Q psy5270 78 LTYNNLNEQSLPGNFFMLETLRALYLGDNDFE---VLPAEIGNLKNLQII 124 (352)
Q Consensus 78 Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~---~ip~~~~nl~~L~~L 124 (352)
+..+.-.. .+|.....+++|++|.+..-... ..-..+.++..|+.+
T Consensus 625 l~~~~~l~-~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~l 673 (889)
T KOG4658|consen 625 LEVTGRLE-SIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENL 673 (889)
T ss_pred cccccccc-cccchhhhcccccEEEeeccccccchhhHHhhhcccchhhh
Confidence 99998665 56777778999999999766533 122344455555544
No 63
>KOG2982|consensus
Probab=98.25 E-value=3.1e-07 Score=80.23 Aligned_cols=222 Identities=20% Similarity=0.211 Sum_probs=115.9
Q ss_pred CCEEEccCCcCcccc--cccC-CCCCCcEEEccCCCCCc---cccccCCCCCCCEEEccCCCCCCCCCCCccccCccCcE
Q psy5270 27 LEILTLFNNQIETLP--TSLS-SLPKLRILNLGMNRLSS---LPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRA 100 (352)
Q Consensus 27 L~~L~L~~N~l~~ip--~~l~-~L~~L~~L~L~~N~l~~---ip~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~ 100 (352)
++.|-+.++.+..+- ..|+ ..+.++.+||.+|+++. |-.-+.+++.|++|+++.|++.. .|-..-..+.+|+.
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s-~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSS-DIKSLPLPLKNLRV 125 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCC-ccccCcccccceEE
Confidence 334445555444332 2333 35667888888888873 33345677888888888888764 22221134567888
Q ss_pred EEccCCccc--cchhhccCcccHHHHHHhcchhhHhhcCc-eEeeccccccccCCCCccccccchhhhhhhhHHhHHHHH
Q psy5270 101 LYLGDNDFE--VLPAEIGNLKNLQIILETFLPDMMEKNRG-HIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELR 177 (352)
Q Consensus 101 L~l~~N~l~--~ip~~~~nl~~L~~L~l~~~p~~~~~~~g-~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~ 177 (352)
|-|.+..+. ..-..+.+++.++.+.++.+....-...- -+-.++ |.........+.
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s--------~~v~tlh~~~c~------------- 184 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWS--------TEVLTLHQLPCL------------- 184 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccc--------hhhhhhhcCCcH-------------
Confidence 888887776 45556677777777766642110000000 000000 000000000000
Q ss_pred HHHhcCCceeecccCcccccCCccCcccccccCCCcccCCCCCcccchhhhhhhhhhccccccccCCCchhhhhHHhHhh
Q psy5270 178 EDARNSKIKFTSIFPFMVDTGLCKNPKIKMNRLSSLPRGFGAFPVLEAFSFTTILDLTYNNLNEQSLPGNFFMLETLRAL 257 (352)
Q Consensus 178 ~~~~~~~n~~~g~~P~~~~~~~l~~l~l~~n~l~~ip~~~~~l~~L~~~~~L~~L~ls~N~l~g~~iP~~~~~l~~L~~L 257 (352)
.....+.+++.-++|.. ..+.+..+.+.+.. .....+.++++..|+|+.|++..-.--+.+..+++|..|
T Consensus 185 ~~~w~~~~~l~r~Fpnv------~sv~v~e~PlK~~s----~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dl 254 (418)
T KOG2982|consen 185 EQLWLNKNKLSRIFPNV------NSVFVCEGPLKTES----SEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDL 254 (418)
T ss_pred HHHHHHHHhHHhhcccc------hheeeecCcccchh----hcccCCCCCcchhhhhcccccccHHHHHHHcCCchhhee
Confidence 01112223333333321 11112222222111 122334444557899999999642223457788999999
Q ss_pred hCCCCcce-ecch----h--hhcccccccc
Q psy5270 258 YLGDNDFE-VLPA----E--IGNLKNLQIM 280 (352)
Q Consensus 258 ~Ls~N~l~-~iP~----~--l~~l~~L~~l 280 (352)
.+++|.+. .+-. . ++.|+++++|
T Consensus 255 Rv~~~Pl~d~l~~~err~llIaRL~~v~vL 284 (418)
T KOG2982|consen 255 RVSENPLSDPLRGGERRFLLIARLTKVQVL 284 (418)
T ss_pred eccCCcccccccCCcceEEEEeeccceEEe
Confidence 99999987 4432 2 6889999987
No 64
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.95 E-value=2.4e-05 Score=72.78 Aligned_cols=98 Identities=22% Similarity=0.341 Sum_probs=64.1
Q ss_pred CCccEEEeeCCcCcccCccccCCCCCCEEEccC-CcCcccccccCCCCCCcEEEccCC-CCCccccccCCCCCCCEEEcc
Q psy5270 2 LYITRITLSHNKLKEIPPGLANLVNLEILTLFN-NQIETLPTSLSSLPKLRILNLGMN-RLSSLPRGFGAFPVLEVLDLT 79 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~-N~l~~ip~~l~~L~~L~~L~L~~N-~l~~ip~~~~~l~~L~~L~Ls 79 (352)
.+++.|++++|.++.+| .+ ..+|++|.+++ +.++.+|..+. ++|+.|++++| ++..+|+. |+.|+++
T Consensus 52 ~~l~~L~Is~c~L~sLP-~L--P~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP~s------Le~L~L~ 120 (426)
T PRK15386 52 RASGRLYIKDCDIESLP-VL--PNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLPES------VRSLEIK 120 (426)
T ss_pred cCCCEEEeCCCCCcccC-CC--CCCCcEEEccCCCCcccCCchhh--hhhhheEccCcccccccccc------cceEEeC
Confidence 56889999999888888 23 24689999987 45667776553 57888999888 66677764 4555555
Q ss_pred CCCCCC-CCCCCccccC------------------ccCcEEEccCCcccc
Q psy5270 80 YNNLNE-QSLPGNFFML------------------ETLRALYLGDNDFEV 110 (352)
Q Consensus 80 ~N~l~g-~~~p~~~~~l------------------~~L~~L~l~~N~l~~ 110 (352)
.|.... ..+|.++..| ++|++|++++|....
T Consensus 121 ~n~~~~L~~LPssLk~L~I~~~n~~~~~~lp~~LPsSLk~L~Is~c~~i~ 170 (426)
T PRK15386 121 GSATDSIKNVPNGLTSLSINSYNPENQARIDNLISPSLKTLSLTGCSNII 170 (426)
T ss_pred CCCCcccccCcchHhheeccccccccccccccccCCcccEEEecCCCccc
Confidence 544211 1355444333 367777777776543
No 65
>KOG1644|consensus
Probab=97.92 E-value=8.5e-06 Score=67.52 Aligned_cols=121 Identities=25% Similarity=0.283 Sum_probs=83.4
Q ss_pred EEEeeCCcCcccCccccC-CCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCC-CCCCCEEEccCCCC
Q psy5270 6 RITLSHNKLKEIPPGLAN-LVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGA-FPVLEVLDLTYNNL 83 (352)
Q Consensus 6 ~L~Ls~N~l~~ip~~l~~-l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~-l~~L~~L~Ls~N~l 83 (352)
.+||.+.++..+.. ++. +.+...+||++|.+..++ .|..+++|..|.++.|.++.|-+.++. +++|..|.|.+|++
T Consensus 23 e~~LR~lkip~ien-lg~~~d~~d~iDLtdNdl~~l~-~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi 100 (233)
T KOG1644|consen 23 ELDLRGLKIPVIEN-LGATLDQFDAIDLTDNDLRKLD-NLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSI 100 (233)
T ss_pred ccccccccccchhh-ccccccccceecccccchhhcc-cCCCccccceEEecCCcceeeccchhhhccccceEEecCcch
Confidence 45666665543332 332 346788899999887653 367788899999999999988777655 56789999999988
Q ss_pred CCCCCCCccccCccCcEEEccCCccccchh----hccCcccHHHHHHhc
Q psy5270 84 NEQSLPGNFFMLETLRALYLGDNDFEVLPA----EIGNLKNLQIILETF 128 (352)
Q Consensus 84 ~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~----~~~nl~~L~~L~l~~ 128 (352)
....--.-+..+++|++|.+-+|..+.-.. .+..+++|+.||...
T Consensus 101 ~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 101 QELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred hhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 641112245677889999998888874332 356667777766553
No 66
>KOG1644|consensus
Probab=97.59 E-value=0.00013 Score=60.58 Aligned_cols=106 Identities=28% Similarity=0.380 Sum_probs=81.6
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCC-CCCCcEEEccCCCCCcccc--ccCCCCCCCEEEcc
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSS-LPKLRILNLGMNRLSSLPR--GFGAFPVLEVLDLT 79 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~-L~~L~~L~L~~N~l~~ip~--~~~~l~~L~~L~Ls 79 (352)
+...+||++|.+..++ .|..+..|..|.|.+|+++.|-+.+.. +++|..|.|.+|++..+-+ -+..+++|+.|.+-
T Consensus 43 ~~d~iDLtdNdl~~l~-~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll 121 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKLD-NLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLL 121 (233)
T ss_pred ccceecccccchhhcc-cCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeec
Confidence 4567899999987554 356788999999999999988665654 6779999999999986533 36788999999999
Q ss_pred CCCCCCCCC--CCccccCccCcEEEccCCccc
Q psy5270 80 YNNLNEQSL--PGNFFMLETLRALYLGDNDFE 109 (352)
Q Consensus 80 ~N~l~g~~~--p~~~~~l~~L~~L~l~~N~l~ 109 (352)
+|..+...- --.+..+++|+.||...=...
T Consensus 122 ~Npv~~k~~YR~yvl~klp~l~~LDF~kVt~~ 153 (233)
T KOG1644|consen 122 GNPVEHKKNYRLYVLYKLPSLRTLDFQKVTRK 153 (233)
T ss_pred CCchhcccCceeEEEEecCcceEeehhhhhHH
Confidence 999875110 114678899999997665443
No 67
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.58 E-value=0.00015 Score=67.60 Aligned_cols=93 Identities=30% Similarity=0.450 Sum_probs=67.3
Q ss_pred CccEEEeeC-CcCcccCccccCCCCCCEEEccCC-cCcccccccCCCCCCcEEEccCCCC---CccccccCCC-------
Q psy5270 3 YITRITLSH-NKLKEIPPGLANLVNLEILTLFNN-QIETLPTSLSSLPKLRILNLGMNRL---SSLPRGFGAF------- 70 (352)
Q Consensus 3 ~L~~L~Ls~-N~l~~ip~~l~~l~~L~~L~L~~N-~l~~ip~~l~~L~~L~~L~L~~N~l---~~ip~~~~~l------- 70 (352)
+|+.|++++ +.++.+|..+. .+|++|++++| .+..+|+. |+.|+++.|.. ..+|+++..|
T Consensus 73 sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP~s------Le~L~L~~n~~~~L~~LPssLk~L~I~~~n~ 144 (426)
T PRK15386 73 ELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLPES------VRSLEIKGSATDSIKNVPNGLTSLSINSYNP 144 (426)
T ss_pred CCcEEEccCCCCcccCCchhh--hhhhheEccCcccccccccc------cceEEeCCCCCcccccCcchHhheecccccc
Confidence 689999987 56678887664 58999999998 66677764 55666666653 4667654333
Q ss_pred -----------CCCCEEEccCCCCCCCCCCCccccCccCcEEEccCCc
Q psy5270 71 -----------PVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDND 107 (352)
Q Consensus 71 -----------~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~ 107 (352)
++|+.|++++|... .+|..+. .+|+.|+++.|.
T Consensus 145 ~~~~~lp~~LPsSLk~L~Is~c~~i--~LP~~LP--~SLk~L~ls~n~ 188 (426)
T PRK15386 145 ENQARIDNLISPSLKTLSLTGCSNI--ILPEKLP--ESLQSITLHIEQ 188 (426)
T ss_pred ccccccccccCCcccEEEecCCCcc--cCccccc--ccCcEEEecccc
Confidence 37999999999865 3565444 589999998873
No 68
>TIGR03294 FrhG coenzyme F420 hydrogenase, subunit gamma. This model represents that clade of F420-dependent hydrogenases (FRH) beta subunits found exclusively and universally in methanogenic archaea. This protein contains two 4Fe-4S cluster binding domains (pfam00037) and scores above the trusted cutoff to model pfam01058 for the "NADH ubiquinone oxidoreductase, 20 Kd subunit" family.
Probab=97.44 E-value=0.00015 Score=62.89 Aligned_cols=58 Identities=31% Similarity=0.632 Sum_probs=48.0
Q ss_pred cCCceeeeccccccCCcccccccc---------cccCCCcccccceecCCCCCCHHHHHHHHHHHHH
Q psy5270 281 LEPRWVISMGSCANGGGYYHYSYS---------VVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 338 (352)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~ 338 (352)
..+++.+..|.|...+|.+..++. .+.+.+.++++|+++|||||.|..++..|.++..
T Consensus 76 ~~ak~vVA~GtCA~~GGi~~~~~~~~~~~~~~~~~~~~~~~V~vdi~IpGCPp~p~~i~~~l~~ll~ 142 (228)
T TIGR03294 76 EKAKVVVALGACAATGNFTRYSRGGQQAQPQHESFVPITDVIDVDLAIPGCPPSPEAIRNVCVALLN 142 (228)
T ss_pred ccCCEEEEeecccccCCcccccCCcccCCCCCCCCcCHHHcccCCEEeeCCCCCHHHHHHHHHHHHc
Confidence 467889999999999998766543 3555677788999999999999999999988653
No 69
>PF01058 Oxidored_q6: NADH ubiquinone oxidoreductase, 20 Kd subunit; InterPro: IPR006137 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. Among the many polypeptide subunits that make up complex I, there is one with a molecular weight of 20 kDa (in mammals) [], which is a component of the iron-sulphur (IP) fragment of the enzyme. It seems to bind a 4Fe-4S iron-sulphur cluster. The 20 kDa subunit has been found to be nuclear encoded, as a precursor form with a transit peptide in mammals, and in Neurospora crassa. It is and chloroplast encoded in various higher plants (gene ndhK or psbG).; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0048038 quinone binding, 0051539 4 iron, 4 sulfur cluster binding, 0055114 oxidation-reduction process; PDB: 3MYR_E 3RGW_S 2FUG_F 3IAS_6 3I9V_F 3IAM_F 2YBB_6 3M9S_F 2FRV_G 1YQ9_B ....
Probab=97.41 E-value=5e-05 Score=59.97 Aligned_cols=56 Identities=34% Similarity=0.629 Sum_probs=40.4
Q ss_pred cCCceeeeccccccCCccccccccc-----ccCCCcccccceecCCCCCCHHHHHHHHHHH
Q psy5270 281 LEPRWVISMGSCANGGGYYHYSYSV-----VRGCDRIIPVDIYVPGCPPTAEALMYGILQL 336 (352)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~ 336 (352)
...+..+..|.|...+|.+....+. ..++...+++|+++|||||.|..++..|.++
T Consensus 71 ~~a~~vIAvGtCA~~GGi~~~~~~~~~~~~~~~~~~~~~VDi~IpGCPp~pd~i~~~l~~L 131 (131)
T PF01058_consen 71 PKAKAVIAVGTCASFGGIPAARNNPSVGDSVGPLLEVVPVDINIPGCPPHPDWILETLLAL 131 (131)
T ss_dssp GCSSEEEEEHHHHHH-TGGGSTTSTTEEE-HHHHHGCS-ECEEE-SSS--HHHHHHHHHHH
T ss_pred cCCceeEcCCCccccCCcccccccccccccccCcCCCccEEEEeeCCCCCHHHHHHHHhhC
Confidence 5778899999999999988554422 3345666899999999999999999988764
No 70
>KOG3665|consensus
Probab=97.39 E-value=0.00012 Score=73.42 Aligned_cols=105 Identities=21% Similarity=0.260 Sum_probs=55.8
Q ss_pred CCccEEEeeCCcCc--ccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCcc--ccccCCCCCCCEEE
Q psy5270 2 LYITRITLSHNKLK--EIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSL--PRGFGAFPVLEVLD 77 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~--~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~i--p~~~~~l~~L~~L~ 77 (352)
|.|+.|.+++=.+. ++-.-..++++|+.||+|+..++.+ ..+++|++|++|.+.+=.|..- -.++.++++|++||
T Consensus 148 PsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLD 226 (699)
T KOG3665|consen 148 PSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLD 226 (699)
T ss_pred cccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeee
Confidence 44555555544442 2222234455566666666555544 4455566666665555444421 12356677777777
Q ss_pred ccCCCCCCCCCCCc-------cccCccCcEEEccCCccc
Q psy5270 78 LTYNNLNEQSLPGN-------FFMLETLRALYLGDNDFE 109 (352)
Q Consensus 78 Ls~N~l~g~~~p~~-------~~~l~~L~~L~l~~N~l~ 109 (352)
+|..+... .+.- -..|++|+.||.+++.+.
T Consensus 227 IS~~~~~~--~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 227 ISRDKNND--DTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred cccccccc--chHHHHHHHHhcccCccccEEecCCcchh
Confidence 77666543 1211 123567777777776665
No 71
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.33 E-value=0.00078 Score=52.72 Aligned_cols=111 Identities=18% Similarity=0.304 Sum_probs=44.2
Q ss_pred CccEEEeeCCcCcccCcc-ccCCCCCCEEEccCCcCccccc-ccCCCCCCcEEEccCCCCCcccc-ccCCCCCCCEEEcc
Q psy5270 3 YITRITLSHNKLKEIPPG-LANLVNLEILTLFNNQIETLPT-SLSSLPKLRILNLGMNRLSSLPR-GFGAFPVLEVLDLT 79 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~-l~~l~~L~~L~L~~N~l~~ip~-~l~~L~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~Ls 79 (352)
+|+.+.+.. .+..|++. |.++++|+.+.+.++ +..++. .+.++++++.+.+.. .+..++. .|..+++|+.+++.
T Consensus 13 ~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~~~ 89 (129)
T PF13306_consen 13 NLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNIDIP 89 (129)
T ss_dssp T--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEEET
T ss_pred CCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccccccccC
Confidence 455566553 45555543 555656666666554 555543 455555666666654 4444443 24456666666665
Q ss_pred CCCCCCCCCCCccccCccCcEEEccCCccccchh-hccCccc
Q psy5270 80 YNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPA-EIGNLKN 120 (352)
Q Consensus 80 ~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip~-~~~nl~~ 120 (352)
.+ +.. .-...|.++ +|+.+.+.. .++.|+. .|.++.+
T Consensus 90 ~~-~~~-i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~ 127 (129)
T PF13306_consen 90 SN-ITE-IGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTK 127 (129)
T ss_dssp TT--BE-EHTTTTTT--T--EEE-TT-B-SS----GGG----
T ss_pred cc-ccE-EchhhhcCC-CceEEEECC-CccEECCcccccccc
Confidence 54 332 113344444 666666554 3444433 4444433
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=97.30 E-value=9.8e-05 Score=38.67 Aligned_cols=20 Identities=35% Similarity=0.612 Sum_probs=10.9
Q ss_pred ccEEEeeCCcCcccCccccC
Q psy5270 4 ITRITLSHNKLKEIPPGLAN 23 (352)
Q Consensus 4 L~~L~Ls~N~l~~ip~~l~~ 23 (352)
|++||+++|+|++||++|++
T Consensus 2 L~~Ldls~n~l~~ip~~~~~ 21 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSSFSN 21 (22)
T ss_dssp ESEEEETSSEESEEGTTTTT
T ss_pred ccEEECCCCcCEeCChhhcC
Confidence 55555555555555555443
No 73
>KOG2982|consensus
Probab=97.29 E-value=6.6e-05 Score=65.98 Aligned_cols=87 Identities=26% Similarity=0.283 Sum_probs=67.0
Q ss_pred CCCCCCEEEccCCcCc---ccccccCCCCCCcEEEccCCCCC-ccccccCCCCCCCEEEccCCCCCCCCCCCccccCccC
Q psy5270 23 NLVNLEILTLFNNQIE---TLPTSLSSLPKLRILNLGMNRLS-SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETL 98 (352)
Q Consensus 23 ~l~~L~~L~L~~N~l~---~ip~~l~~L~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L 98 (352)
.++.++++||.+|.++ +|-.-+.+|+.|+.|+++.|.+. .|-..-....+|++|-|.+-.+.....-..+..++.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 4678999999999998 56666788999999999999998 3322114567899999998888764444556678888
Q ss_pred cEEEccCCccc
Q psy5270 99 RALYLGDNDFE 109 (352)
Q Consensus 99 ~~L~l~~N~l~ 109 (352)
++|.++.|++.
T Consensus 149 telHmS~N~~r 159 (418)
T KOG2982|consen 149 TELHMSDNSLR 159 (418)
T ss_pred hhhhhccchhh
Confidence 99999999665
No 74
>KOG3665|consensus
Probab=97.26 E-value=7.1e-05 Score=75.13 Aligned_cols=124 Identities=20% Similarity=0.271 Sum_probs=91.2
Q ss_pred CccEEEeeCCcC-c-ccCccccC-CCCCCEEEccCCcCc--ccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEE
Q psy5270 3 YITRITLSHNKL-K-EIPPGLAN-LVNLEILTLFNNQIE--TLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLD 77 (352)
Q Consensus 3 ~L~~L~Ls~N~l-~-~ip~~l~~-l~~L~~L~L~~N~l~--~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~ 77 (352)
+|+.||+++.+. . .-|..+|. +++|+.|.+++=.|. ++-.-..++++|..||+|+.+++.+ .+++++++|++|.
T Consensus 123 nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L~ 201 (699)
T KOG3665|consen 123 NLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVLS 201 (699)
T ss_pred hhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHHh
Confidence 688999998764 3 56666764 799999999987775 4445567899999999999999988 6789999999998
Q ss_pred ccCCCCCCCCCCCccccCccCcEEEccCCccccch---h----hccCcccHHHHHHh
Q psy5270 78 LTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLP---A----EIGNLKNLQIILET 127 (352)
Q Consensus 78 Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~l~~ip---~----~~~nl~~L~~L~l~ 127 (352)
+.+=.+.....=..+.+|++|+.||+|..+...-+ . .-..+++|+.||.+
T Consensus 202 mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcS 258 (699)
T KOG3665|consen 202 MRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCS 258 (699)
T ss_pred ccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecC
Confidence 87765542111235788999999999998876322 2 12235566665544
No 75
>KOG0473|consensus
Probab=97.14 E-value=5.2e-06 Score=70.22 Aligned_cols=99 Identities=23% Similarity=0.235 Sum_probs=86.8
Q ss_pred eeCCcCcccC-ccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCCCCCCC
Q psy5270 9 LSHNKLKEIP-PGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQS 87 (352)
Q Consensus 9 Ls~N~l~~ip-~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~g~~ 87 (352)
++--.+++|| .++.....-+.||++.|++..+-..+..++.+..||++.|++..+|.+++....++.+++..|..+ .
T Consensus 25 ~s~s~~s~~~v~ei~~~kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~--~ 102 (326)
T KOG0473|consen 25 LSLSELSEIPVREIASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHS--Q 102 (326)
T ss_pred CCHHHhcccchhhhhccceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchh--h
Confidence 3334455677 457777889999999999988888888899999999999999999999999999999999999997 4
Q ss_pred CCCccccCccCcEEEccCCccc
Q psy5270 88 LPGNFFMLETLRALYLGDNDFE 109 (352)
Q Consensus 88 ~p~~~~~l~~L~~L~l~~N~l~ 109 (352)
.|.+++..+.++++++-.|.|.
T Consensus 103 ~p~s~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 103 QPKSQKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred CCccccccCCcchhhhccCcch
Confidence 8999999999999999999976
No 76
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=97.12 E-value=0.00026 Score=37.07 Aligned_cols=21 Identities=29% Similarity=0.512 Sum_probs=14.4
Q ss_pred cCcEEEccCCccccchhhccC
Q psy5270 97 TLRALYLGDNDFEVLPAEIGN 117 (352)
Q Consensus 97 ~L~~L~l~~N~l~~ip~~~~n 117 (352)
+|++||+++|+|+.||++|++
T Consensus 1 ~L~~Ldls~n~l~~ip~~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSFSN 21 (22)
T ss_dssp TESEEEETSSEESEEGTTTTT
T ss_pred CccEEECCCCcCEeCChhhcC
Confidence 466777777777777776654
No 77
>COG1941 FrhG Coenzyme F420-reducing hydrogenase, gamma subunit [Energy production and conversion]
Probab=97.07 E-value=0.00055 Score=58.05 Aligned_cols=57 Identities=32% Similarity=0.610 Sum_probs=43.7
Q ss_pred CCceeeeccccccCCccccccc--------------------ccccCCCcccccceecCCCCCCHHHHHHHHHHHHH
Q psy5270 282 EPRWVISMGSCANGGGYYHYSY--------------------SVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 338 (352)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~gcpp~~~~~~~~~~~~~~ 338 (352)
...+.+..|.|..-+|+..+.. ..+..+..++++|+.+|||||+|..|.+.+.++.+
T Consensus 76 kakivVA~GsCA~~Ggv~~~~~~s~~e~l~~~y~~~~~~~~~~~v~Pl~evI~VD~~IpGCPP~~e~I~~al~all~ 152 (247)
T COG1941 76 KAKIVVALGSCAVTGGVQGLRNKSGEELLRPVYGDAKSTFNEESVVPLGEVIDVDYAIPGCPPSPEEIARALTALLE 152 (247)
T ss_pred hCcEEEEEecchhcCCchhhhhccccccchhhhhcccCCCCccceEEchheeeeeeecCCCCcCHHHHHHHHHHHHc
Confidence 4567778888887666544333 44566677889999999999999999999988754
No 78
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.06 E-value=0.00094 Score=58.18 Aligned_cols=121 Identities=24% Similarity=0.380 Sum_probs=83.0
Q ss_pred CCCccEEEeeCCcCc-ccCcc----ccCCCCCCEEEccCCcCccccc-c-------------cCCCCCCcEEEccCCCCC
Q psy5270 1 MLYITRITLSHNKLK-EIPPG----LANLVNLEILTLFNNQIETLPT-S-------------LSSLPKLRILNLGMNRLS 61 (352)
Q Consensus 1 l~~L~~L~Ls~N~l~-~ip~~----l~~l~~L~~L~L~~N~l~~ip~-~-------------l~~L~~L~~L~L~~N~l~ 61 (352)
|++|+..+||+|-|. +.|+. +.+-+.|.+|.|++|.+..+-. - ..+-+.|++...+.|++.
T Consensus 91 cp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle 170 (388)
T COG5238 91 CPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE 170 (388)
T ss_pred CCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc
Confidence 578888999999887 66654 5667889999999998774421 2 234567888888888887
Q ss_pred ccccc-----cCCCCCCCEEEccCCCCCCCCCCC--------ccccCccCcEEEccCCcccc-----chhhccCcccHHH
Q psy5270 62 SLPRG-----FGAFPVLEVLDLTYNNLNEQSLPG--------NFFMLETLRALYLGDNDFEV-----LPAEIGNLKNLQI 123 (352)
Q Consensus 62 ~ip~~-----~~~l~~L~~L~Ls~N~l~g~~~p~--------~~~~l~~L~~L~l~~N~l~~-----ip~~~~nl~~L~~ 123 (352)
.-|.. +..-..|+++-+..|.+. |. .+..+++|+.||+..|-|+. +-..++.+..|+.
T Consensus 171 ngs~~~~a~~l~sh~~lk~vki~qNgIr----pegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 171 NGSKELSAALLESHENLKEVKIQQNGIR----PEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred cCcHHHHHHHHHhhcCceeEEeeecCcC----cchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 55543 222246888888888764 33 23567889999999999872 2234455555555
Q ss_pred HH
Q psy5270 124 IL 125 (352)
Q Consensus 124 L~ 125 (352)
|.
T Consensus 247 L~ 248 (388)
T COG5238 247 LR 248 (388)
T ss_pred cc
Confidence 53
No 79
>KOG1909|consensus
Probab=96.92 E-value=0.00045 Score=62.05 Aligned_cols=124 Identities=22% Similarity=0.271 Sum_probs=63.5
Q ss_pred CccEEEeeCCcCcccC-----ccccCCCCCCEEEccCCcCc--cc---ccccCCCCCCcEEEccCCCCCc-----ccccc
Q psy5270 3 YITRITLSHNKLKEIP-----PGLANLVNLEILTLFNNQIE--TL---PTSLSSLPKLRILNLGMNRLSS-----LPRGF 67 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip-----~~l~~l~~L~~L~L~~N~l~--~i---p~~l~~L~~L~~L~L~~N~l~~-----ip~~~ 67 (352)
.|++++.+.|.+..-+ ..|...+.|+.+.++.|.+. .+ -..+..+++|++|||.+|-|+. +-..+
T Consensus 158 ~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL 237 (382)
T KOG1909|consen 158 KLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKAL 237 (382)
T ss_pred ceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHh
Confidence 4555566666554222 22444455666666666553 22 2345566666666666666651 23334
Q ss_pred CCCCCCCEEEccCCCCCCCCCCCcc-----ccCccCcEEEccCCccc-----cchhhccCcccHHHHHHh
Q psy5270 68 GAFPVLEVLDLTYNNLNEQSLPGNF-----FMLETLRALYLGDNDFE-----VLPAEIGNLKNLQIILET 127 (352)
Q Consensus 68 ~~l~~L~~L~Ls~N~l~g~~~p~~~-----~~l~~L~~L~l~~N~l~-----~ip~~~~nl~~L~~L~l~ 127 (352)
..++.|+.|++++|.+.. .--..| ...++|+.|.+.+|.++ .+-.++...+.|..|.++
T Consensus 238 ~s~~~L~El~l~dcll~~-~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLn 306 (382)
T KOG1909|consen 238 SSWPHLRELNLGDCLLEN-EGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLN 306 (382)
T ss_pred cccchheeeccccccccc-ccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCC
Confidence 555666666666666643 111111 11345666666666665 123344455555555544
No 80
>KOG2120|consensus
Probab=96.84 E-value=2.1e-05 Score=68.99 Aligned_cols=79 Identities=18% Similarity=0.195 Sum_probs=56.3
Q ss_pred CCcEEEccCCCCC--ccccccCCCCCCCEEEccCCCCCCCCCCCccccCccCcEEEccCCc-cc--cchhhccCcccHHH
Q psy5270 49 KLRILNLGMNRLS--SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDND-FE--VLPAEIGNLKNLQI 123 (352)
Q Consensus 49 ~L~~L~L~~N~l~--~ip~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~-l~--~ip~~~~nl~~L~~ 123 (352)
.||+|||+.-.++ ++---+..+++|+.|.+.++++.. +|-..+..-..|+.++++.++ |+ ..---+.+++.|+.
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD-~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDD-PIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCc-HHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 4888888887777 444445667788888888888876 666777777788888887765 66 33334667777777
Q ss_pred HHHhc
Q psy5270 124 ILETF 128 (352)
Q Consensus 124 L~l~~ 128 (352)
|.+++
T Consensus 265 LNlsW 269 (419)
T KOG2120|consen 265 LNLSW 269 (419)
T ss_pred cCchH
Confidence 76654
No 81
>KOG2739|consensus
Probab=96.79 E-value=0.00093 Score=57.80 Aligned_cols=89 Identities=30% Similarity=0.340 Sum_probs=56.3
Q ss_pred cCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCC---ccccccCCCCCCCEEEccCCCCCCCCCCCccc
Q psy5270 17 IPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLS---SLPRGFGAFPVLEVLDLTYNNLNEQSLPGNFF 93 (352)
Q Consensus 17 ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~---~ip~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~ 93 (352)
+..-.-.+..|+.|.+.+..++++ ..+-.|++|+.|+++.|.+. .++.-.-++++|++|++++|+++ ++.++.
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt~-~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~---~lstl~ 110 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTTL-TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK---DLSTLR 110 (260)
T ss_pred cccccccccchhhhhhhccceeec-ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc---cccccc
Confidence 333333445677777777766643 33556778888888888443 45555555688888888888875 344443
Q ss_pred ---cCccCcEEEccCCccc
Q psy5270 94 ---MLETLRALYLGDNDFE 109 (352)
Q Consensus 94 ---~l~~L~~L~l~~N~l~ 109 (352)
.+.+|..|++.+|.-+
T Consensus 111 pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 111 PLKELENLKSLDLFNCSVT 129 (260)
T ss_pred hhhhhcchhhhhcccCCcc
Confidence 3445667777777655
No 82
>KOG2739|consensus
Probab=96.49 E-value=0.001 Score=57.48 Aligned_cols=112 Identities=23% Similarity=0.264 Sum_probs=74.1
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcC--c-ccccccCCCCCCcEEEccCCCCCc---cccccCCCCCCCEE
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQI--E-TLPTSLSSLPKLRILNLGMNRLSS---LPRGFGAFPVLEVL 76 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l--~-~ip~~l~~L~~L~~L~L~~N~l~~---ip~~~~~l~~L~~L 76 (352)
.|+.|++.+-.++++- .+..|++|+.|.++.|++ . .++...-.+++|++++++.|++.. +++ +..+.+|..|
T Consensus 44 ~le~ls~~n~gltt~~-~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~p-l~~l~nL~~L 121 (260)
T KOG2739|consen 44 ELELLSVINVGLTTLT-NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRP-LKELENLKSL 121 (260)
T ss_pred chhhhhhhccceeecc-cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccch-hhhhcchhhh
Confidence 3455555555554321 244678999999999954 4 566666677999999999999883 333 5677788999
Q ss_pred EccCCCCCCCCCCC--ccccCccCcEEEccCCccccchhhcc
Q psy5270 77 DLTYNNLNEQSLPG--NFFMLETLRALYLGDNDFEVLPAEIG 116 (352)
Q Consensus 77 ~Ls~N~l~g~~~p~--~~~~l~~L~~L~l~~N~l~~ip~~~~ 116 (352)
|+.+|.-+...=+. .|.-+++|++||-..-.=.+.|.+..
T Consensus 122 dl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv~~~Ea~~~~~ 163 (260)
T KOG2739|consen 122 DLFNCSVTNLDDYREKVFLLLPSLKYLDGCDVDGEEAPEADA 163 (260)
T ss_pred hcccCCccccccHHHHHHHHhhhhccccccccCCcccccccc
Confidence 99999876511111 25557888888754433335555443
No 83
>KOG0473|consensus
Probab=96.46 E-value=5.1e-05 Score=64.37 Aligned_cols=83 Identities=22% Similarity=0.168 Sum_probs=76.9
Q ss_pred CCccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCC
Q psy5270 2 LYITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYN 81 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N 81 (352)
.+.+.||++.|++..+-..|.-++.|..||++.|++..+|..++.+..++.+++..|+.+..|.+++..+.++.+++-.|
T Consensus 42 kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~e~k~~ 121 (326)
T KOG0473|consen 42 KRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKNEQKKT 121 (326)
T ss_pred ceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcchhhhccC
Confidence 45688999999998888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q psy5270 82 NLN 84 (352)
Q Consensus 82 ~l~ 84 (352)
.|+
T Consensus 122 ~~~ 124 (326)
T KOG0473|consen 122 EFF 124 (326)
T ss_pred cch
Confidence 874
No 84
>KOG2120|consensus
Probab=96.43 E-value=6.6e-05 Score=65.97 Aligned_cols=53 Identities=19% Similarity=0.283 Sum_probs=22.8
Q ss_pred ccEEEeeCCcCc--ccCccccCCCCCCEEEccCCcCc-ccccccCCCCCCcEEEcc
Q psy5270 4 ITRITLSHNKLK--EIPPGLANLVNLEILTLFNNQIE-TLPTSLSSLPKLRILNLG 56 (352)
Q Consensus 4 L~~L~Ls~N~l~--~ip~~l~~l~~L~~L~L~~N~l~-~ip~~l~~L~~L~~L~L~ 56 (352)
|++||||.-.++ ++---+..+.+|+.|.|.++++. .|-..+..-.+|+.++++
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnls 242 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLS 242 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccc
Confidence 444455444443 22222334444444444444444 333334444444444443
No 85
>KOG1201|consensus
Probab=96.38 E-value=0.0055 Score=54.30 Aligned_cols=78 Identities=45% Similarity=0.766 Sum_probs=66.5
Q ss_pred HHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccC
Q psy5270 124 ILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKN 202 (352)
Q Consensus 124 L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~ 202 (352)
....++|.|.+.++|+|+.++|..|..+.+.+..||.+|.+..|+.+++..|+... ...+.+.+-+.|+.++++.+..
T Consensus 152 t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~-~~~~IktTlv~P~~i~Tgmf~~ 229 (300)
T KOG1201|consen 152 TTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRAL-GKDGIKTTLVCPYFINTGMFDG 229 (300)
T ss_pred HHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhc-CCCCeeEEEEeeeeccccccCC
Confidence 34567999999999999999999999999999999999999999999999888642 3445788889999888766553
No 86
>KOG2123|consensus
Probab=96.31 E-value=0.00015 Score=63.18 Aligned_cols=97 Identities=26% Similarity=0.279 Sum_probs=65.0
Q ss_pred CccEEEeeCCcCcccCccccCCCCCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCcccc--ccCCCCCCCEEEccC
Q psy5270 3 YITRITLSHNKLKEIPPGLANLVNLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPR--GFGAFPVLEVLDLTY 80 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~~l~~l~~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~--~~~~l~~L~~L~Ls~ 80 (352)
+.+.|++.++.|+.|.- ...|+.|++|.|+-|.++++ ..+..+++|+.|+|..|.|..+-+ .+.++++|+.|-|..
T Consensus 20 ~vkKLNcwg~~L~DIsi-c~kMp~lEVLsLSvNkIssL-~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~E 97 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDISI-CEKMPLLEVLSLSVNKISSL-APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDE 97 (388)
T ss_pred HhhhhcccCCCccHHHH-HHhcccceeEEeeccccccc-hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhcc
Confidence 34567777777764321 13567788888888888766 236778888888888888876644 367788888888888
Q ss_pred CCCCCCCCCCc-----cccCccCcEEE
Q psy5270 81 NNLNEQSLPGN-----FFMLETLRALY 102 (352)
Q Consensus 81 N~l~g~~~p~~-----~~~l~~L~~L~ 102 (352)
|.-.| .-+.. +.-|++|++||
T Consensus 98 NPCc~-~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 98 NPCCG-EAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred CCccc-ccchhHHHHHHHHcccchhcc
Confidence 87776 33322 34455666554
No 87
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=96.27 E-value=0.0026 Score=30.85 Aligned_cols=16 Identities=31% Similarity=0.675 Sum_probs=5.8
Q ss_pred CccEEEeeCCcCcccC
Q psy5270 3 YITRITLSHNKLKEIP 18 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip 18 (352)
+|+.|++++|+|+++|
T Consensus 2 ~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSLP 17 (17)
T ss_dssp T-SEEEETSS--SSE-
T ss_pred ccCEEECCCCCCCCCc
Confidence 4445555555544443
No 88
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.26 E-value=0.014 Score=45.52 Aligned_cols=102 Identities=25% Similarity=0.313 Sum_probs=61.5
Q ss_pred ccCc-cccCCCCCCEEEccCCcCccccc-ccCCCCCCcEEEccCCCCCccccc-cCCCCCCCEEEccCCCCCCCCCCCcc
Q psy5270 16 EIPP-GLANLVNLEILTLFNNQIETLPT-SLSSLPKLRILNLGMNRLSSLPRG-FGAFPVLEVLDLTYNNLNEQSLPGNF 92 (352)
Q Consensus 16 ~ip~-~l~~l~~L~~L~L~~N~l~~ip~-~l~~L~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~Ls~N~l~g~~~p~~~ 92 (352)
.|++ .|.++++|+.+.+.. .+..|+. .|.++++|+.+++..+ +..++.. |.++++++.+.+.. .+.. .-...|
T Consensus 2 ~i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~-i~~~~F 77 (129)
T PF13306_consen 2 SIGNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKS-IGDNAF 77 (129)
T ss_dssp EE-TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-E-E-TTTT
T ss_pred EECHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccc-cccccc
Confidence 3454 477888999999985 5777755 7888989999999885 8777764 78888899999976 4432 123466
Q ss_pred ccCccCcEEEccCCccccchh-hccCcccHHH
Q psy5270 93 FMLETLRALYLGDNDFEVLPA-EIGNLKNLQI 123 (352)
Q Consensus 93 ~~l~~L~~L~l~~N~l~~ip~-~~~nl~~L~~ 123 (352)
..+++|+.+++..+ +..++. .+.+. +++.
T Consensus 78 ~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~ 107 (129)
T PF13306_consen 78 SNCTNLKNIDIPSN-ITEIGSSSFSNC-NLKE 107 (129)
T ss_dssp TT-TTECEEEETTT--BEEHTTTTTT--T--E
T ss_pred cccccccccccCcc-ccEEchhhhcCC-CceE
Confidence 77999999999876 666655 45554 5543
No 89
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=96.16 E-value=0.0038 Score=54.48 Aligned_cols=113 Identities=22% Similarity=0.251 Sum_probs=81.3
Q ss_pred CCCccEEEeeCCcCc-c----cCccccCCCCCCEEEccCCcCc----cccc-------ccCCCCCCcEEEccCCCCC-cc
Q psy5270 1 MLYITRITLSHNKLK-E----IPPGLANLVNLEILTLFNNQIE----TLPT-------SLSSLPKLRILNLGMNRLS-SL 63 (352)
Q Consensus 1 l~~L~~L~Ls~N~l~-~----ip~~l~~l~~L~~L~L~~N~l~----~ip~-------~l~~L~~L~~L~L~~N~l~-~i 63 (352)
|..++.+|||+|.|. + +-..+.+-.+|++..++.-..+ ++|+ .+-++++|+..+||+|-|. +.
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 356789999999996 3 3445777788999888775433 3443 3568899999999999998 66
Q ss_pred ccc----cCCCCCCCEEEccCCCCC---CCCCCCc---------cccCccCcEEEccCCccccchh
Q psy5270 64 PRG----FGAFPVLEVLDLTYNNLN---EQSLPGN---------FFMLETLRALYLGDNDFEVLPA 113 (352)
Q Consensus 64 p~~----~~~l~~L~~L~Ls~N~l~---g~~~p~~---------~~~l~~L~~L~l~~N~l~~ip~ 113 (352)
|+. +..-+.|+.|.+++|.+. |+.|-.. ..+-+.|+.+..+.|+|..-|.
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~ 174 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSK 174 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcH
Confidence 665 455678999999999873 1112111 2345678999999999885554
No 90
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=96.00 E-value=0.0048 Score=29.93 Aligned_cols=16 Identities=50% Similarity=0.785 Sum_probs=6.3
Q ss_pred CCCEEEccCCcCcccc
Q psy5270 26 NLEILTLFNNQIETLP 41 (352)
Q Consensus 26 ~L~~L~L~~N~l~~ip 41 (352)
+|+.|++++|+|+++|
T Consensus 2 ~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSLP 17 (17)
T ss_dssp T-SEEEETSS--SSE-
T ss_pred ccCEEECCCCCCCCCc
Confidence 4555555555555443
No 91
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.11 E-value=0.014 Score=31.64 Aligned_cols=19 Identities=37% Similarity=0.767 Sum_probs=9.9
Q ss_pred CCccEEEeeCCcCcccCcc
Q psy5270 2 LYITRITLSHNKLKEIPPG 20 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~ 20 (352)
++|++|+|++|+|+.||++
T Consensus 2 ~~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCCEEECCCCcCCcCCHH
Confidence 4455555555555555543
No 92
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.11 E-value=0.014 Score=31.64 Aligned_cols=19 Identities=37% Similarity=0.767 Sum_probs=9.9
Q ss_pred CCccEEEeeCCcCcccCcc
Q psy5270 2 LYITRITLSHNKLKEIPPG 20 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~~ip~~ 20 (352)
++|++|+|++|+|+.||++
T Consensus 2 ~~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCCEEECCCCcCCcCCHH
Confidence 4455555555555555543
No 93
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=94.99 E-value=0.018 Score=50.80 Aligned_cols=81 Identities=35% Similarity=0.537 Sum_probs=69.2
Q ss_pred CcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 117 NLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 117 nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
|...+..|.....|.|..+..|.|+++.|..++.+.|....|+.+|..+.++.+.+..|+. -.+.+++...|+.+.
T Consensus 115 N~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~----~~gV~V~~v~PG~~~ 190 (265)
T COG0300 115 NILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELK----GTGVKVTAVCPGPTR 190 (265)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEEEecCccc
Confidence 4566666677778999999999999999999999999999999999999999988887773 457899999999887
Q ss_pred cCCcc
Q psy5270 197 TGLCK 201 (352)
Q Consensus 197 ~~~l~ 201 (352)
+....
T Consensus 191 T~f~~ 195 (265)
T COG0300 191 TEFFD 195 (265)
T ss_pred ccccc
Confidence 76653
No 94
>KOG2123|consensus
Probab=94.79 E-value=0.0032 Score=55.11 Aligned_cols=79 Identities=27% Similarity=0.412 Sum_probs=42.5
Q ss_pred CCCEEEccCCcCcccccccCCCCCCcEEEccCCCCCccccccCCCCCCCEEEccCCCCCCCCCCC--ccccCccCcEEEc
Q psy5270 26 NLEILTLFNNQIETLPTSLSSLPKLRILNLGMNRLSSLPRGFGAFPVLEVLDLTYNNLNEQSLPG--NFFMLETLRALYL 103 (352)
Q Consensus 26 ~L~~L~L~~N~l~~ip~~l~~L~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~g~~~p~--~~~~l~~L~~L~l 103 (352)
+.+.|++.++.+..|. -...|+.|++|.|+-|+++++-+ +..++.|+.|+|..|.|.. +-+ -+.++++|+.|+|
T Consensus 20 ~vkKLNcwg~~L~DIs-ic~kMp~lEVLsLSvNkIssL~p-l~rCtrLkElYLRkN~I~s--ldEL~YLknlpsLr~LWL 95 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDIS-ICEKMPLLEVLSLSVNKISSLAP-LQRCTRLKELYLRKNCIES--LDELEYLKNLPSLRTLWL 95 (388)
T ss_pred HhhhhcccCCCccHHH-HHHhcccceeEEeeccccccchh-HHHHHHHHHHHHHhccccc--HHHHHHHhcCchhhhHhh
Confidence 4455566666665431 13355666666666666665533 4555666666666665542 221 2334555666666
Q ss_pred cCCcc
Q psy5270 104 GDNDF 108 (352)
Q Consensus 104 ~~N~l 108 (352)
..|.=
T Consensus 96 ~ENPC 100 (388)
T KOG2123|consen 96 DENPC 100 (388)
T ss_pred ccCCc
Confidence 66553
No 95
>PRK10468 hydrogenase 2 small subunit; Provisional
Probab=94.71 E-value=0.032 Score=51.25 Aligned_cols=70 Identities=23% Similarity=0.413 Sum_probs=51.2
Q ss_pred cCCceeeeccccccCCccccccccccc--CCCcccccc--eecCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy5270 281 LEPRWVISMGSCANGGGYYHYSYSVVR--GCDRIIPVD--IYVPGCPPTAEALMYGILQLQKKVKRMKILQSWYR 351 (352)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~gcpp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (352)
......+..|.|...+|+....+|--+ |++.+++.. +.+|||||.|..++..|+.+.-..+ .-.|-++.|
T Consensus 146 ~~A~aVVAvGtCAs~GGI~aa~pnptga~gv~~~l~~~PVINIPGCPp~P~~i~~tL~~l~~~g~-lp~LD~~gR 219 (371)
T PRK10468 146 EGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGK-PPKLDDKNR 219 (371)
T ss_pred ccCCEEEEEecccccCCcccCCCCCCCCccHHHhcCCCCeEEcCCCCCCHHHHHHHHHHHHhcCC-CccccccCC
Confidence 456788999999999999888877644 555554332 8999999999999999988773321 122555554
No 96
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.59 E-value=0.028 Score=30.45 Aligned_cols=17 Identities=59% Similarity=0.776 Sum_probs=7.4
Q ss_pred CCcEEEccCCCCCcccc
Q psy5270 49 KLRILNLGMNRLSSLPR 65 (352)
Q Consensus 49 ~L~~L~L~~N~l~~ip~ 65 (352)
+|+.|+|++|+++.||+
T Consensus 3 ~L~~L~L~~N~l~~lp~ 19 (26)
T smart00369 3 NLRELDLSNNQLSSLPP 19 (26)
T ss_pred CCCEEECCCCcCCcCCH
Confidence 34444444444444443
No 97
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.59 E-value=0.028 Score=30.45 Aligned_cols=17 Identities=59% Similarity=0.776 Sum_probs=7.4
Q ss_pred CCcEEEccCCCCCcccc
Q psy5270 49 KLRILNLGMNRLSSLPR 65 (352)
Q Consensus 49 ~L~~L~L~~N~l~~ip~ 65 (352)
+|+.|+|++|+++.||+
T Consensus 3 ~L~~L~L~~N~l~~lp~ 19 (26)
T smart00370 3 NLRELDLSNNQLSSLPP 19 (26)
T ss_pred CCCEEECCCCcCCcCCH
Confidence 34444444444444443
No 98
>TIGR00391 hydA hydrogenase (NiFe) small subunit (hydA). Called (hupA/hydA/hupS/hoxK/vhtG) Involved in hydrogenase reactions performing different specific functions in different species eg (EC 1.12.2.1) in Desulfovibrio gigas,(EC 1.12.99.3) in Wolinella succinogenes and (EC 1.18.99.1) in E.coli and a number of other species and (EC 1.12.99.-) in the archea.
Probab=93.99 E-value=0.086 Score=48.49 Aligned_cols=57 Identities=25% Similarity=0.495 Sum_probs=44.8
Q ss_pred cCCceeeeccccccCCccccccccccc--CCCcccc--cceecCCCCCCHHHHHHHHHHHH
Q psy5270 281 LEPRWVISMGSCANGGGYYHYSYSVVR--GCDRIIP--VDIYVPGCPPTAEALMYGILQLQ 337 (352)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~gcpp~~~~~~~~~~~~~ 337 (352)
......+..|.|...+|+....++--. +++.+++ ..+.+|||||.|..++..|..+.
T Consensus 148 ~~A~aVIAvGtCAs~GGI~aa~pnptga~~v~~vi~~~pvinIPGCPp~Pe~i~~tl~~~l 208 (365)
T TIGR00391 148 EGAAAIIAIGTCSSWGGVQAAGPNPTGAVPLQKVIPDKPVINVPGCPPNPHNFLATVAYII 208 (365)
T ss_pred hcCCEEEEEeccccccCccCCCCCCCCCcchhHhcCCCCeEEeCCCCCCHHHHHHHHHHHH
Confidence 456788999999999998887777533 5565552 23999999999999998888754
No 99
>KOG1205|consensus
Probab=93.59 E-value=0.15 Score=45.48 Aligned_cols=80 Identities=35% Similarity=0.444 Sum_probs=62.1
Q ss_pred cccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 118 LKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 118 l~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
.-...++....+|.|..+++|+|+.++|..|..++|....|+.+|.++.++.+.+..|+... .....+ .+.|+++++
T Consensus 123 ~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~--~~~i~i-~V~PG~V~T 199 (282)
T KOG1205|consen 123 VFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELIPL--GTIIII-LVSPGPIET 199 (282)
T ss_pred chhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHHHHHHHHHHHhhcc--CceEEE-EEecCceee
Confidence 33444555566889988889999999999999999998899999999999999888777542 111333 678988877
Q ss_pred CCc
Q psy5270 198 GLC 200 (352)
Q Consensus 198 ~~l 200 (352)
...
T Consensus 200 e~~ 202 (282)
T KOG1205|consen 200 EFT 202 (282)
T ss_pred ccc
Confidence 643
No 100
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=92.88 E-value=0.16 Score=43.90 Aligned_cols=78 Identities=37% Similarity=0.503 Sum_probs=62.7
Q ss_pred CcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 117 NLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 117 nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
|++.+-+.....+|.|..+..|.|++++|..+....|.--.|+.+|..+..+...+..++. -.+++.+.+.|+.+.
T Consensus 112 Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~----g~~IRVt~I~PG~v~ 187 (246)
T COG4221 112 NVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELA----GTGIRVTVISPGLVE 187 (246)
T ss_pred HHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhc----CCCeeEEEecCceec
Confidence 3444444555668999999999999999999999999999999999999888777655543 457899999998774
Q ss_pred cC
Q psy5270 197 TG 198 (352)
Q Consensus 197 ~~ 198 (352)
..
T Consensus 188 ~~ 189 (246)
T COG4221 188 TT 189 (246)
T ss_pred ce
Confidence 43
No 101
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=90.90 E-value=0.13 Score=27.75 Aligned_cols=17 Identities=24% Similarity=0.577 Sum_probs=9.4
Q ss_pred CccEEEeeCCcCcccCc
Q psy5270 3 YITRITLSHNKLKEIPP 19 (352)
Q Consensus 3 ~L~~L~Ls~N~l~~ip~ 19 (352)
+|++|++++|+|+++|+
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 45555555555555554
No 102
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=88.34 E-value=0.32 Score=26.31 Aligned_cols=16 Identities=50% Similarity=0.767 Sum_probs=8.2
Q ss_pred CcEEEccCCCCCcccc
Q psy5270 50 LRILNLGMNRLSSLPR 65 (352)
Q Consensus 50 L~~L~L~~N~l~~ip~ 65 (352)
|+.|++++|+++++|+
T Consensus 4 L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 4 LKELNVSNNQLTSLPE 19 (26)
T ss_pred cceeecCCCccccCcc
Confidence 4555555555555544
No 103
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=87.30 E-value=0.5 Score=25.63 Aligned_cols=13 Identities=31% Similarity=0.552 Sum_probs=5.6
Q ss_pred CCcEEEccCCCCC
Q psy5270 49 KLRILNLGMNRLS 61 (352)
Q Consensus 49 ~L~~L~L~~N~l~ 61 (352)
+|+.|+++.|+++
T Consensus 3 ~L~~L~L~~NkI~ 15 (26)
T smart00365 3 NLEELDLSQNKIK 15 (26)
T ss_pred ccCEEECCCCccc
Confidence 3444444444443
No 104
>KOG1014|consensus
Probab=86.94 E-value=0.98 Score=40.57 Aligned_cols=77 Identities=32% Similarity=0.534 Sum_probs=61.4
Q ss_pred cHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 120 NLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 120 ~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
....+....+|.|..+..|.|++++|..+..+.|.+..|+.+|..+..+.+.+..|+.. .++.+..+.|..+.+..
T Consensus 162 ~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~----~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 162 SVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRCLQKEYES----KGIFVQSVIPYLVATKM 237 (312)
T ss_pred hHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHHHHHHHHHHHHh----cCeEEEEeehhheeccc
Confidence 33344455689999999999999999999999999999999999888887777777654 37788888887776554
Q ss_pred c
Q psy5270 200 C 200 (352)
Q Consensus 200 l 200 (352)
.
T Consensus 238 ~ 238 (312)
T KOG1014|consen 238 A 238 (312)
T ss_pred c
Confidence 3
No 105
>PRK08339 short chain dehydrogenase; Provisional
Probab=86.40 E-value=0.98 Score=39.99 Aligned_cols=70 Identities=27% Similarity=0.396 Sum_probs=56.1
Q ss_pred HHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 125 LETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 125 ~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.....|.|..+..|.|+.++|..+..+.+....|+.+|.++.++.+.+..++.. .+++++.+.|+.+.++
T Consensus 124 ~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~el~~----~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 124 TRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGP----KGITVNGIMPGIIRTD 193 (263)
T ss_pred HHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcc----cCeEEEEEEeCcCccH
Confidence 334467776666789999999888877888888999999999999888877754 3789999999887664
No 106
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=85.84 E-value=0.28 Score=25.83 Aligned_cols=14 Identities=29% Similarity=0.439 Sum_probs=7.1
Q ss_pred ccCcEEEccCCccc
Q psy5270 96 ETLRALYLGDNDFE 109 (352)
Q Consensus 96 ~~L~~L~l~~N~l~ 109 (352)
++|++|++++|+++
T Consensus 2 ~~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 2 PNLETLDLSNNQIT 15 (24)
T ss_dssp TT-SEEE-TSSBEH
T ss_pred CCCCEEEccCCcCC
Confidence 45566666666655
No 107
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=83.35 E-value=1.9 Score=38.34 Aligned_cols=66 Identities=18% Similarity=0.113 Sum_probs=52.8
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
...|.|.. .|.|+.+++..+..+.|....|+.+|.++.++.+.++.++.. .+++++.+.|+.+.+.
T Consensus 130 ~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~----~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 130 RAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGP----QGIRVNAISAGPVRTL 195 (271)
T ss_pred HHHHhhcc--CceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHHHHHhh----cCeEEEEEecCCcccc
Confidence 34566642 488999988888777888888999999999999999888754 3789999999987664
No 108
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=82.77 E-value=2.5 Score=37.32 Aligned_cols=69 Identities=19% Similarity=0.170 Sum_probs=53.5
Q ss_pred HHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 125 LETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 125 ~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.....|.|.. ..+.|+.+++..+..+.|....|+.+|.++.++.+.++.++..+ +++++.+.|+.+.+.
T Consensus 128 ~~~~~p~m~~-~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~----gIrVn~i~PG~v~T~ 196 (261)
T PRK08690 128 AKAARPMMRG-RNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKE----GIRCNGISAGPIKTL 196 (261)
T ss_pred HHHHHHHhhh-cCcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccch
Confidence 3334455543 35789888888887778888899999999999998888777553 789999999988765
No 109
>KOG4169|consensus
Probab=82.32 E-value=0.81 Score=39.28 Aligned_cols=76 Identities=34% Similarity=0.467 Sum_probs=59.5
Q ss_pred HHhcchhhHhhc---CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCcc
Q psy5270 125 LETFLPDMMEKN---RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCK 201 (352)
Q Consensus 125 ~l~~~p~~~~~~---~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~ 201 (352)
....+|.|-+.+ .|-|++++|..++.+.|..-.|+.++..+.++.++++... ....++.++..+.|+++.+...+
T Consensus 114 T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~a--yy~~sGV~~~avCPG~t~t~l~~ 191 (261)
T KOG4169|consen 114 TQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLA--YYQRSGVRFNAVCPGFTRTDLAE 191 (261)
T ss_pred hhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehhhhhhh--hHhhcCEEEEEECCCcchHHHHH
Confidence 334466666554 4678999999999999999999999999999999877654 44567899999999987665443
Q ss_pred C
Q psy5270 202 N 202 (352)
Q Consensus 202 ~ 202 (352)
.
T Consensus 192 ~ 192 (261)
T KOG4169|consen 192 N 192 (261)
T ss_pred H
Confidence 3
No 110
>KOG4308|consensus
Probab=81.55 E-value=0.026 Score=54.50 Aligned_cols=125 Identities=26% Similarity=0.261 Sum_probs=73.6
Q ss_pred ccEEEeeCCcCc-----ccCccccCCCCCCEEEccCCcCc-----ccccccC----CCCCCcEEEccCCCCCc-----cc
Q psy5270 4 ITRITLSHNKLK-----EIPPGLANLVNLEILTLFNNQIE-----TLPTSLS----SLPKLRILNLGMNRLSS-----LP 64 (352)
Q Consensus 4 L~~L~Ls~N~l~-----~ip~~l~~l~~L~~L~L~~N~l~-----~ip~~l~----~L~~L~~L~L~~N~l~~-----ip 64 (352)
+++|++..+.++ .+.+.+.....++++|++.|.+. .++..+. ...+++.|.+.+|.++. +-
T Consensus 146 l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~ 225 (478)
T KOG4308|consen 146 LQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLD 225 (478)
T ss_pred HHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHH
Confidence 334455555544 24444555667777777777663 1233333 46667777777777661 11
Q ss_pred cccCCCCC-CCEEEccCCCCCCC---CCCCccccC-ccCcEEEccCCccc-----cchhhccCcccHHHHHHhc
Q psy5270 65 RGFGAFPV-LEVLDLTYNNLNEQ---SLPGNFFML-ETLRALYLGDNDFE-----VLPAEIGNLKNLQIILETF 128 (352)
Q Consensus 65 ~~~~~l~~-L~~L~Ls~N~l~g~---~~p~~~~~l-~~L~~L~l~~N~l~-----~ip~~~~nl~~L~~L~l~~ 128 (352)
..+...++ +..|++..|++... .+.+.+..+ ..++.++++.|+|+ .+...+..+..++.+.+..
T Consensus 226 ~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~ 299 (478)
T KOG4308|consen 226 EVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSN 299 (478)
T ss_pred HHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhccc
Confidence 22444444 66688888877531 122334444 56788888888886 2456667777777777665
No 111
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=81.54 E-value=2.2 Score=38.05 Aligned_cols=73 Identities=19% Similarity=0.243 Sum_probs=54.9
Q ss_pred cHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 120 NLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 120 ~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
....+.....|.|.. .|.|+.+++..+..+.|....|+.+|.++.++.+.++.++.. .+++++.+.|+++.+.
T Consensus 121 g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 121 SLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGK----KGIRVNAISAGPIKTL 193 (274)
T ss_pred HHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhhh----cCeEEEEEecCccccH
Confidence 333334444566643 478999888887777787788999999999999998887754 3788999999987653
No 112
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=80.19 E-value=4 Score=35.74 Aligned_cols=77 Identities=31% Similarity=0.393 Sum_probs=57.0
Q ss_pred ccHHHHHHhcchhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 119 KNLQIILETFLPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 119 ~~L~~L~l~~~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
.....+.....|.+..+. .|.|+.++|..+..+.+....|+.+|.++.++.+.+..++... +.+++.+.|+.+.+
T Consensus 116 ~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~----girvn~v~PG~v~t 191 (251)
T PRK12481 116 KTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQY----NINVNAIAPGYMAT 191 (251)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCCCcc
Confidence 333334444455565443 4789999888887777777889999999999999988877543 78999999998766
Q ss_pred CC
Q psy5270 198 GL 199 (352)
Q Consensus 198 ~~ 199 (352)
..
T Consensus 192 ~~ 193 (251)
T PRK12481 192 DN 193 (251)
T ss_pred Cc
Confidence 53
No 113
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=80.01 E-value=2.8 Score=36.99 Aligned_cols=65 Identities=22% Similarity=0.199 Sum_probs=51.8
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.|. ..|.|+.++|..+..+.|....|..+|.++.++.+.++.++.. .+++++.+.|+.+.+.
T Consensus 132 ~~~~m~--~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gIrVn~v~PG~v~T~ 196 (260)
T PRK06603 132 AEALMH--DGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGE----NNIRVNAISAGPIKTL 196 (260)
T ss_pred HHhhhc--cCceEEEEecCccccCCCcccchhhHHHHHHHHHHHHHHHhhh----cCeEEEEEecCcCcch
Confidence 345553 2488999988877777788889999999999999999888754 3789999999987654
No 114
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.78 E-value=2.8 Score=36.95 Aligned_cols=65 Identities=22% Similarity=0.180 Sum_probs=51.6
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.. .|.|+.++|..+..+.+....|+.+|.++.++.+.+..++.. .+++++.+.|+.+.+.
T Consensus 133 ~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 133 AKKLMTE--GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGK----DGIRVNAISAGPIRTL 197 (257)
T ss_pred HHHhccc--CceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhhh----cCCEEeeeecCcccCH
Confidence 3454432 488999998888777788888999999999999998887754 3789999999887664
No 115
>KOG1947|consensus
Probab=79.50 E-value=0.46 Score=45.80 Aligned_cols=123 Identities=24% Similarity=0.203 Sum_probs=69.1
Q ss_pred CCccEEEeeCCc-Ccc--cCccccCCCCCCEEEccCCc-C-ccc----ccccCCCCCCcEEEccCCC-CCcc-cccc-CC
Q psy5270 2 LYITRITLSHNK-LKE--IPPGLANLVNLEILTLFNNQ-I-ETL----PTSLSSLPKLRILNLGMNR-LSSL-PRGF-GA 69 (352)
Q Consensus 2 ~~L~~L~Ls~N~-l~~--ip~~l~~l~~L~~L~L~~N~-l-~~i----p~~l~~L~~L~~L~L~~N~-l~~i-p~~~-~~ 69 (352)
+.|+.+.+.... ++. +-+....+++|+.|+++++. . ... ......+.+|+.+++++.. ++.. -..+ ..
T Consensus 188 ~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~ 267 (482)
T KOG1947|consen 188 PLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASR 267 (482)
T ss_pred chhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhh
Confidence 345555555442 332 33334567788888888732 1 111 2234456788888888876 5522 1122 23
Q ss_pred CCCCCEEEccCCC-CCCCCCCCccccCccCcEEEccCCccc---cchhhccCcccHHHH
Q psy5270 70 FPVLEVLDLTYNN-LNEQSLPGNFFMLETLRALYLGDNDFE---VLPAEIGNLKNLQII 124 (352)
Q Consensus 70 l~~L~~L~Ls~N~-l~g~~~p~~~~~l~~L~~L~l~~N~l~---~ip~~~~nl~~L~~L 124 (352)
+++|+.|.+.++. ++...+-.....+++|++|+++.+... .+.....++.+++.+
T Consensus 268 c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l 326 (482)
T KOG1947|consen 268 CPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLREL 326 (482)
T ss_pred CCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhh
Confidence 7788888877776 554223333445677888888877642 233333344444443
No 116
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=79.49 E-value=3.7 Score=36.11 Aligned_cols=67 Identities=27% Similarity=0.281 Sum_probs=53.1
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+.....+.|+.++|..+....+....|+.+|.++.++...+..++.. .+.+++.+.|+.+.+..
T Consensus 136 ~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~----~gi~v~~v~PG~i~T~~ 202 (260)
T PRK08416 136 AKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGE----KNIRVNAVSGGPIDTDA 202 (260)
T ss_pred HHhhhccCCEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhhh----hCeEEEEEeeCcccChh
Confidence 45555555688999998877777788889999999999999988887754 37888899998876653
No 117
>PLN02780 ketoreductase/ oxidoreductase
Probab=79.47 E-value=2.3 Score=38.96 Aligned_cols=72 Identities=29% Similarity=0.458 Sum_probs=55.5
Q ss_pred HHHhcchhhHhhcCceEeecccccccc--CCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 124 ILETFLPDMMEKNRGHIVGISSMAGIV--GLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 124 L~l~~~p~~~~~~~g~i~~iss~~~l~--~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
+.....|.|..+..|.++.++|..+.. ..|....|+.+|..+.++.+.+..++.. .+++++.+.|+++.++.
T Consensus 172 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~----~gI~V~~v~PG~v~T~~ 245 (320)
T PLN02780 172 VTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKK----SGIDVQCQVPLYVATKM 245 (320)
T ss_pred HHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhc----cCeEEEEEeeCceecCc
Confidence 333446777777789999999887753 3577788999999999998888877643 47889999999887653
No 118
>PRK07063 short chain dehydrogenase; Provisional
Probab=79.39 E-value=2.2 Score=37.49 Aligned_cols=76 Identities=29% Similarity=0.425 Sum_probs=57.6
Q ss_pred ccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 119 KNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 119 ~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.....+.....|.+..+..+.++.++|..+..+.+....|+.+|.++.++.+.+..++.. .+++++.+.|+++.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~----~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 119 DGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAA----RNVRVNAIAPGYIETQ 194 (260)
T ss_pred HHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHhCc----cCeEEEEEeeCCccCh
Confidence 333334444566666666789999999888888888888999999999998888777643 3788999999887654
No 119
>KOG1610|consensus
Probab=78.20 E-value=4.5 Score=36.54 Aligned_cols=64 Identities=42% Similarity=0.702 Sum_probs=52.2
Q ss_pred hHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 132 MMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 132 ~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
+..+.+|.+++++|..+....|....||.||.++..+.+.+-.|+. --+.+++-+.|+.+.++.
T Consensus 152 Llr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~----~fGV~VsiiePG~f~T~l 215 (322)
T KOG1610|consen 152 LLRRARGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRRELR----PFGVKVSIIEPGFFKTNL 215 (322)
T ss_pred HHHhccCeEEEecccccCccCcccccchhhHHHHHHHHHHHHHHHH----hcCcEEEEeccCcccccc
Confidence 4456789999999999999999999999999999888776665554 448888888898776654
No 120
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=77.85 E-value=3.4 Score=36.23 Aligned_cols=70 Identities=20% Similarity=0.174 Sum_probs=53.5
Q ss_pred HHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 124 ILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 124 L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
+.....|.+.. .|.++.+++..+..+.+....|+.+|.++.++.+.++.++.. .+++++.+.|+.+.+..
T Consensus 125 l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gI~vn~i~PG~v~T~~ 194 (252)
T PRK06079 125 VAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLGK----KGIRVNAISAGAVKTLA 194 (252)
T ss_pred HHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHHHHhhh----cCcEEEEEecCcccccc
Confidence 33333455532 478888888877777788888999999999999998888754 37899999999887653
No 121
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=76.92 E-value=3.4 Score=36.46 Aligned_cols=69 Identities=17% Similarity=0.166 Sum_probs=52.4
Q ss_pred HHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 124 ILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 124 L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
+.....|.+. ..|.|+.+++..+..+.+....|+.+|.++.++.+.+..++.. .+++++.+.|+++.+.
T Consensus 127 l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gIrVn~i~PG~v~T~ 195 (260)
T PRK06997 127 LAKAALPMLS--DDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGP----KGIRANGISAGPIKTL 195 (260)
T ss_pred HHHHHHHhcC--CCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHhcc----cCeEEEEEeeCccccc
Confidence 3334456552 3478988888877777777788999999999999988877654 3689999999987663
No 122
>KOG4308|consensus
Probab=76.49 E-value=0.046 Score=52.80 Aligned_cols=108 Identities=31% Similarity=0.379 Sum_probs=79.1
Q ss_pred CCccEEEeeCCcCc-----ccCcccc----CCCCCCEEEccCCcCcc-----cccccCCCCC-CcEEEccCCCCCc----
Q psy5270 2 LYITRITLSHNKLK-----EIPPGLA----NLVNLEILTLFNNQIET-----LPTSLSSLPK-LRILNLGMNRLSS---- 62 (352)
Q Consensus 2 ~~L~~L~Ls~N~l~-----~ip~~l~----~l~~L~~L~L~~N~l~~-----ip~~l~~L~~-L~~L~L~~N~l~~---- 62 (352)
..++.+|++.|.+. .++..+. ...++++|.+.+|.++. +-..+...+. ++.+++..|++..
T Consensus 172 ~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~ 251 (478)
T KOG4308|consen 172 EHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVE 251 (478)
T ss_pred cchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHH
Confidence 45778899999883 2444444 47889999999998871 2234566666 7789999999973
Q ss_pred -cccccCCC-CCCCEEEccCCCCCCC---CCCCccccCccCcEEEccCCccc
Q psy5270 63 -LPRGFGAF-PVLEVLDLTYNNLNEQ---SLPGNFFMLETLRALYLGDNDFE 109 (352)
Q Consensus 63 -ip~~~~~l-~~L~~L~Ls~N~l~g~---~~p~~~~~l~~L~~L~l~~N~l~ 109 (352)
+.+.+..+ ..+++++++.|.++.. .+...+..+..++++.++.|.+.
T Consensus 252 ~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 252 KLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 34556666 6889999999999862 12334556678999999999986
No 123
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=75.96 E-value=2.2 Score=23.39 Aligned_cols=13 Identities=38% Similarity=0.485 Sum_probs=7.6
Q ss_pred CCCEEEccCCcCc
Q psy5270 26 NLEILTLFNNQIE 38 (352)
Q Consensus 26 ~L~~L~L~~N~l~ 38 (352)
+|++|||++|.+.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 4566666666554
No 124
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=75.71 E-value=3.7 Score=36.13 Aligned_cols=74 Identities=26% Similarity=0.289 Sum_probs=55.4
Q ss_pred ccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 119 KNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 119 ~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.....+.....|.+.. .|.|+.+++..+..+.|....|+.+|.++.++.+.+..++.. .+++++.+.|+++.+.
T Consensus 124 ~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 124 YSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGP----KNIRVNAISAGPIRTL 197 (258)
T ss_pred HHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhCc----CCeEEEEEecCcccCc
Confidence 3333333444555543 488999988888777888889999999999999988877753 4789999999988664
No 125
>PRK07062 short chain dehydrogenase; Provisional
Probab=75.58 E-value=4.6 Score=35.51 Aligned_cols=68 Identities=26% Similarity=0.422 Sum_probs=53.2
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+.....+.++.++|..+..+.+....|+.+|.++.++.+.+..++.. .+++++.+.|+.+.++.
T Consensus 129 ~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la~e~~~----~gi~v~~i~PG~v~t~~ 196 (265)
T PRK07062 129 FLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAP----KGVRVNSILLGLVESGQ 196 (265)
T ss_pred HHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhh----cCeEEEEEecCccccch
Confidence 345565555689999998888877788888999999999988888777654 37889999998876653
No 126
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=73.81 E-value=5.5 Score=34.93 Aligned_cols=68 Identities=28% Similarity=0.312 Sum_probs=53.9
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
...|.+.....+.++.+++..+..+.+....|..+|.++.++.+.+..++.. .+.+++.+.|+.+.++
T Consensus 137 ~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~----~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 137 QFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAH----LGITVNAINPGPTDTG 204 (256)
T ss_pred HHHHHHhhcCCeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhh----hCeEEEEEEEccccCC
Confidence 3456665556789999999888888888889999999999998888777654 3688889999887664
No 127
>PRK08589 short chain dehydrogenase; Validated
Probab=73.55 E-value=5.7 Score=35.19 Aligned_cols=68 Identities=32% Similarity=0.369 Sum_probs=52.9
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
...|.+... .+.++.++|..+..+.+....|+.+|.++..+.+.++.++.. .+++++.+.|+.+.++.
T Consensus 124 ~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~----~gI~v~~v~PG~v~T~~ 191 (272)
T PRK08589 124 MLLPLMMEQ-GGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGR----DGIRANAIAPGTIETPL 191 (272)
T ss_pred HHHHHHHHc-CCEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhh----cCeEEEEEecCcccCch
Confidence 345555544 488999998888877778888999999999998888877654 37899999999876653
No 128
>PRK05599 hypothetical protein; Provisional
Probab=73.53 E-value=4 Score=35.63 Aligned_cols=67 Identities=21% Similarity=0.265 Sum_probs=52.4
Q ss_pred chhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+..+. .|.|+.++|..+..+.+....|+.+|.++.++.+.+..++.. .+.+++.+.|+.+.+..
T Consensus 120 ~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~----~~I~v~~v~PG~v~T~~ 187 (246)
T PRK05599 120 ADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLHG----SHVRLIIARPGFVIGSM 187 (246)
T ss_pred HHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHHHHhcC----CCceEEEecCCcccchh
Confidence 35555443 589999999888877788889999999999998888776643 46888999999886653
No 129
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=73.36 E-value=4.6 Score=35.46 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=51.8
Q ss_pred cchhhHh-hcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMME-KNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~-~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+|.+.. ...|.++.++|..+..+.+....|+.+|.++.++.+.++.++. -.+++++.+.|+++.++
T Consensus 120 ~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~----~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 120 LIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYG----GKGIRAYTVLLGSFDTP 187 (259)
T ss_pred HHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHHHHhC----CCCEEEEEeccCcccCc
Confidence 3555553 3568899999888887788888899999999999888877654 34688999999887664
No 130
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=73.09 E-value=3.5 Score=37.53 Aligned_cols=77 Identities=19% Similarity=0.161 Sum_probs=55.7
Q ss_pred cccHHHHHHhcchhhHhhcCceEeeccccccccCCCCc-cccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 118 LKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNL-VPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 118 l~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l-~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
+.....+.....|.|.. .|.|+.++|..+....|.. ..|+.+|.++.++.+.+..++.. -.+++++.+.|+++.
T Consensus 154 ~~~~~~l~~~~~p~m~~--~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~---~~gIrVn~V~PG~v~ 228 (303)
T PLN02730 154 SYSFVSLLQHFGPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGR---KYKIRVNTISAGPLG 228 (303)
T ss_pred hHHHHHHHHHHHHHHhc--CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCc---CCCeEEEEEeeCCcc
Confidence 33334444445676654 3899999988777777754 47999999999999988877642 136899999999887
Q ss_pred cCC
Q psy5270 197 TGL 199 (352)
Q Consensus 197 ~~~ 199 (352)
+..
T Consensus 229 T~~ 231 (303)
T PLN02730 229 SRA 231 (303)
T ss_pred Cch
Confidence 654
No 131
>KOG1200|consensus
Probab=72.22 E-value=3.1 Score=34.96 Aligned_cols=60 Identities=28% Similarity=0.397 Sum_probs=51.4
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCc
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLC 200 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l 200 (352)
.++|++++|.-+..+--....|..+|..+.++.+..+.++... +++.+...|+++.+++-
T Consensus 143 ~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaArEla~k----nIrvN~VlPGFI~tpMT 202 (256)
T KOG1200|consen 143 GLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARELARK----NIRVNVVLPGFIATPMT 202 (256)
T ss_pred CceEEeehhhhcccccccchhhhhhcCceeeeeHHHHHHHhhc----CceEeEeccccccChhh
Confidence 3599999998888888888899999999999999998888754 78999999999977653
No 132
>PRK12747 short chain dehydrogenase; Provisional
Probab=71.36 E-value=6.8 Score=34.10 Aligned_cols=66 Identities=27% Similarity=0.454 Sum_probs=51.7
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+.. .+.|+.++|..+..+.+....|..+|.++.++.+.+..++.. .+.+++.+.|+++.++.
T Consensus 130 ~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~----~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 130 ALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA----RGITVNAILPGFIKTDM 195 (252)
T ss_pred HHHHhhc--CCeEEEECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHhH----cCCEEEEEecCCccCch
Confidence 3454433 478999999888888888889999999999999888877653 47889999998876643
No 133
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=70.09 E-value=8 Score=33.82 Aligned_cols=76 Identities=29% Similarity=0.392 Sum_probs=55.9
Q ss_pred ccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 119 KNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 119 ~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.....+.....|.+.....+.++.+++..+..+.+....|+.+|.++.++.+.+..++.. .+.+++.+.|+.+.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~----~gi~v~~i~PG~v~t~ 199 (258)
T PRK06935 124 NSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAA----YNIQVNAIAPGYIKTA 199 (258)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHHhhh----hCeEEEEEEecccccc
Confidence 333333334456666666688998888877777777788999999999998888877654 3688888999877654
No 134
>PRK05993 short chain dehydrogenase; Provisional
Probab=69.40 E-value=8.3 Score=34.26 Aligned_cols=67 Identities=37% Similarity=0.478 Sum_probs=52.5
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+|.+.....+.++.++|..+..+.+....|+.+|.++.++...+..++.. .+.+++.+.|+.+.++
T Consensus 118 ~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~----~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 118 VIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQG----SGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhhh----hCCEEEEEecCCccCc
Confidence 356666666788999999888877788888999999999988887766643 3788888889877654
No 135
>PRK08862 short chain dehydrogenase; Provisional
Probab=69.34 E-value=10 Score=32.69 Aligned_cols=64 Identities=23% Similarity=0.318 Sum_probs=48.0
Q ss_pred cchhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.|..+. .|.|+.++|..+ .+....|..+|.++.++.+.+..++.. .+.+++.+.|+++.+.
T Consensus 126 ~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~asKaal~~~~~~la~el~~----~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 126 AAERMRKRNKKGVIVNVISHDD---HQDLTGVESSNALVSGFTHSWAKELTP----FNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHhcCCCceEEEEecCCC---CCCcchhHHHHHHHHHHHHHHHHHHhh----cCcEEEEEecCcCcCC
Confidence 345565443 588988887544 355667999999999999988887754 3789999999988664
No 136
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=69.31 E-value=5.7 Score=35.34 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=47.4
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|.++.+++..+....|....|..+|.++.++.+.+..++.. .+++++.+.|+.+.+.
T Consensus 141 ~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~~----~gIrVn~v~PG~v~T~ 198 (272)
T PRK08159 141 GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGP----KNIRVNAISAGPIKTL 198 (272)
T ss_pred CceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHHHHhcc----cCeEEEEeecCCcCCH
Confidence 478888888777777788888999999999999988877754 3788999999887653
No 137
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=68.98 E-value=8.3 Score=33.88 Aligned_cols=67 Identities=24% Similarity=0.170 Sum_probs=50.9
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
...|.|. ..|.|+.+++..+....+....|..+|.++.++.+.+..++.. .+++++.+.|+.+.+..
T Consensus 133 ~~~p~m~--~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gI~Vn~v~PG~v~T~~ 199 (258)
T PRK07533 133 LAEPLMT--NGGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGP----KGIRVHAISPGPLKTRA 199 (258)
T ss_pred HHHHHhc--cCCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHHHHhhh----cCcEEEEEecCCcCChh
Confidence 3456553 2478888888777666677778999999999999988877754 37899999998876643
No 138
>PRK07825 short chain dehydrogenase; Provisional
Probab=68.60 E-value=9 Score=33.83 Aligned_cols=72 Identities=36% Similarity=0.647 Sum_probs=54.8
Q ss_pred HHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 124 ILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 124 L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
+.....|.+.....+.++.++|..+..+.+....|+.+|..+.++.+.+..++. -.+.+++.+.|+++.+..
T Consensus 116 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~----~~gi~v~~v~Pg~v~t~~ 187 (273)
T PRK07825 116 GSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELR----GTGVHVSVVLPSFVNTEL 187 (273)
T ss_pred HHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhh----ccCcEEEEEeCCcCcchh
Confidence 333445667666778999999988888888888899999998888777766653 347888888898776543
No 139
>PRK06139 short chain dehydrogenase; Provisional
Probab=68.20 E-value=6.6 Score=36.15 Aligned_cols=71 Identities=31% Similarity=0.546 Sum_probs=56.0
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCc
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLC 200 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l 200 (352)
...|.+..+..|.++.++|..+..+.|....|+.+|..+.++.+.+..++.. ..+++++.+.|+.+.++..
T Consensus 125 ~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~El~~---~~gI~V~~v~Pg~v~T~~~ 195 (330)
T PRK06139 125 AALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELAD---HPDIHVCDVYPAFMDTPGF 195 (330)
T ss_pred HHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEEecCCccCccc
Confidence 3456666666789999988888888888889999999999999888877632 2368888999998877654
No 140
>KOG0725|consensus
Probab=67.78 E-value=14 Score=33.05 Aligned_cols=65 Identities=38% Similarity=0.472 Sum_probs=51.0
Q ss_pred hhHhhcCceEeeccccccccCCCCc-cccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 131 DMMEKNRGHIVGISSMAGIVGLPNL-VPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 131 ~~~~~~~g~i~~iss~~~l~~lp~l-~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.+...+.|..+++..+....+.. ..|..+|.++..+.+.++.++..+ +.+++.+.|+.+.++.
T Consensus 136 ~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~----gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 136 MLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKH----GIRVNSVSPGLVKTSL 201 (270)
T ss_pred HHHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHhhc----CcEEEEeecCcEeCCc
Confidence 3444467788888888777665555 789999999999999999888765 7889999998776654
No 141
>KOG1207|consensus
Probab=67.60 E-value=5.4 Score=32.83 Aligned_cols=58 Identities=43% Similarity=0.515 Sum_probs=48.6
Q ss_pred cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 136 NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 136 ~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
..|.|++++|......+.+...||.+|.++..+.+.++.++... +++.+..-|..+.+
T Consensus 128 ~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELGp~----kIRVNsVNPTVVmT 185 (245)
T KOG1207|consen 128 IKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELGPQ----KIRVNSVNPTVVMT 185 (245)
T ss_pred CCceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhCcc----eeEeeccCCeEEEe
Confidence 46889999999999999999999999999999998888887643 67888888876543
No 142
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=67.37 E-value=8.6 Score=34.06 Aligned_cols=68 Identities=29% Similarity=0.418 Sum_probs=53.6
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
...|.+.....+.++.++|..+..+.+....|+.+|.++.++.+.+..++.. .+++++.+.|+.+.++
T Consensus 143 ~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~----~girvn~v~Pg~v~t~ 210 (278)
T PRK08277 143 VFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAK----VGIRVNAIAPGFFLTE 210 (278)
T ss_pred HHHHHHHhcCCcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCc----cCeEEEEEEeccCcCc
Confidence 3345555555688999999888888888889999999999988888777643 4788889999887665
No 143
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=65.58 E-value=8.8 Score=33.91 Aligned_cols=58 Identities=12% Similarity=0.134 Sum_probs=47.5
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|.|+.+++..+..+.+....|..+|.++.++.+.+..++.. .+++++.+.|+.+.+.
T Consensus 138 ~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gIrVn~i~PG~v~T~ 195 (262)
T PRK07984 138 GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGP----EGVRVNAISAGPIRTL 195 (262)
T ss_pred CcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhcc----cCcEEeeeecCcccch
Confidence 478888888877777788888999999999999988877754 3788999999877653
No 144
>PRK07791 short chain dehydrogenase; Provisional
Probab=64.69 E-value=16 Score=32.59 Aligned_cols=53 Identities=28% Similarity=0.309 Sum_probs=45.2
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCc
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPF 193 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~ 193 (352)
.+.|+.++|..+..+.+....|..+|.++.++.+.+..++... +++++.+.|+
T Consensus 149 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~Pg 201 (286)
T PRK07791 149 DARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRY----GVTVNAIAPA 201 (286)
T ss_pred CcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHh----CeEEEEECCC
Confidence 3689999988888888888899999999999999988887653 7888888886
No 145
>PRK05876 short chain dehydrogenase; Provisional
Probab=63.53 E-value=13 Score=33.12 Aligned_cols=73 Identities=37% Similarity=0.613 Sum_probs=54.5
Q ss_pred HHHHhcchhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 123 IILETFLPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 123 ~L~l~~~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.....|.|..+. .+.++.++|..+..+.+....|+.+|..+.++.+.+..++.. .+.+++.+.|+.+.++.
T Consensus 120 ~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~----~gi~v~~v~Pg~v~t~~ 193 (275)
T PRK05876 120 HTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTA----DGIGVSVLCPMVVETNL 193 (275)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHHHhhh----cCcEEEEEEeCcccccc
Confidence 33334456665544 578999999888888888889999999999988888777643 36788888888776543
No 146
>PRK08303 short chain dehydrogenase; Provisional
Probab=63.29 E-value=12 Score=33.86 Aligned_cols=69 Identities=22% Similarity=0.190 Sum_probs=49.6
Q ss_pred hcchhhHhhcCceEeecccccccc---CCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIV---GLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~---~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
...|.|..+..|.|+.++|..+.. +.+....|+.+|.++.++.+.++.++.. .+++++.+.|+++.++.
T Consensus 141 ~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~----~gIrVn~v~PG~v~T~~ 212 (305)
T PRK08303 141 FALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAP----HGATAVALTPGWLRSEM 212 (305)
T ss_pred HHHHHhhhCCCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhh----cCcEEEEecCCccccHH
Confidence 345666555568898888754321 2233457999999999999998888754 36899999999887653
No 147
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=63.20 E-value=17 Score=31.66 Aligned_cols=67 Identities=31% Similarity=0.372 Sum_probs=50.4
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+.....+.++.+++..+..+.+....|..+|.++..+.+.+..++.. .+++++.+.|+.+.+..
T Consensus 130 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~----~~i~v~~v~pg~~~t~~ 196 (255)
T PRK06113 130 APEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE----KNIRVNGIAPGAILTDA 196 (255)
T ss_pred HHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhh----hCeEEEEEecccccccc
Confidence 45454445578888888887777777888999999999988887766543 36888888898776643
No 148
>PRK07024 short chain dehydrogenase; Provisional
Probab=62.88 E-value=15 Score=32.03 Aligned_cols=68 Identities=38% Similarity=0.576 Sum_probs=51.9
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
...|.+.....+.++.++|..+..+.+....|+.+|..+..+...+..++.. .+.++..+.|+.+.++
T Consensus 120 ~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~----~gi~v~~v~Pg~v~t~ 187 (257)
T PRK07024 120 PFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRP----AGVRVVTIAPGYIRTP 187 (257)
T ss_pred HHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhc----cCcEEEEEecCCCcCc
Confidence 3456666666688999998888888888888999999998887777666543 4678888888877654
No 149
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=62.40 E-value=17 Score=31.63 Aligned_cols=68 Identities=26% Similarity=0.344 Sum_probs=52.2
Q ss_pred cchhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+..+. .|.++.++|..+..+.+....|+.+|.++.++.+.++.++.. .+.+++.+.|+.+.+..
T Consensus 127 ~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~----~gi~v~~v~pG~v~T~~ 195 (253)
T PRK08993 127 AAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAK----HNINVNAIAPGYMATNN 195 (253)
T ss_pred HHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhh----hCeEEEEEeeCcccCcc
Confidence 345555443 478998888888777777889999999999998888877654 36888899998887653
No 150
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=61.98 E-value=18 Score=31.49 Aligned_cols=67 Identities=31% Similarity=0.448 Sum_probs=50.7
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.+.....+.++.+++..+..+.+....|..+|.++.++...+..++... +.+++.+.|+++.+..
T Consensus 129 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~pG~~~t~~ 195 (254)
T PRK08085 129 ARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARH----NIQVNGIAPGYFKTEM 195 (254)
T ss_pred HHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHHHHhh----CeEEEEEEeCCCCCcc
Confidence 444444456788888887776677777889999999999888887776543 7888999998776543
No 151
>PRK05855 short chain dehydrogenase; Validated
Probab=61.78 E-value=11 Score=37.20 Aligned_cols=69 Identities=39% Similarity=0.475 Sum_probs=54.6
Q ss_pred cchhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCc
Q psy5270 128 FLPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLC 200 (352)
Q Consensus 128 ~~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l 200 (352)
..|.|.... .|.|+.++|..+..+.+....|+.+|.++.++.+.+..++.. .+++++.+.|+.+.++..
T Consensus 434 ~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~----~gi~v~~v~Pg~v~t~~~ 503 (582)
T PRK05855 434 FGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAA----AGIGVTAICPGFVDTNIV 503 (582)
T ss_pred HHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhcc----cCcEEEEEEeCCCcccch
Confidence 355665544 478999999988888888889999999999988888776643 378899999998877543
No 152
>PRK06114 short chain dehydrogenase; Provisional
Probab=61.12 E-value=18 Score=31.48 Aligned_cols=77 Identities=31% Similarity=0.319 Sum_probs=52.8
Q ss_pred ccHHHHHHhcchhhHhhcCceEeeccccccccCCCC--ccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 119 KNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPN--LVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 119 ~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~--l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
.....+.....|.+.....+.++.++|..+..+.+. ...|..+|.++.++.+.+..++.. .+.+++.+.|+++.
T Consensus 119 ~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~----~gi~v~~v~PG~i~ 194 (254)
T PRK06114 119 TGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVG----RGIRVNSISPGYTA 194 (254)
T ss_pred hhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhh----cCeEEEEEeecCcc
Confidence 333333334455565556678888888776655443 467889999999988888777653 36888888998776
Q ss_pred cCC
Q psy5270 197 TGL 199 (352)
Q Consensus 197 ~~~ 199 (352)
++.
T Consensus 195 t~~ 197 (254)
T PRK06114 195 TPM 197 (254)
T ss_pred Ccc
Confidence 643
No 153
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=61.03 E-value=23 Score=30.17 Aligned_cols=78 Identities=27% Similarity=0.438 Sum_probs=58.2
Q ss_pred CcccHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 117 NLKNLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 117 nl~~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
|+..-..|....+|+...+..+.|++++|--++.+....-.||.+|+++..+...+-..+ .-.+..+-.+.|..+.
T Consensus 111 Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Ql----k~t~veVIE~~PP~V~ 186 (245)
T COG3967 111 NLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQL----KDTSVEVIELAPPLVD 186 (245)
T ss_pred hhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHh----hhcceEEEEecCCcee
Confidence 556666666677888888889999999987777666667789999999988776655444 3335777777887776
Q ss_pred cC
Q psy5270 197 TG 198 (352)
Q Consensus 197 ~~ 198 (352)
++
T Consensus 187 t~ 188 (245)
T COG3967 187 TT 188 (245)
T ss_pred cC
Confidence 64
No 154
>PRK06398 aldose dehydrogenase; Validated
Probab=60.90 E-value=14 Score=32.39 Aligned_cols=69 Identities=28% Similarity=0.441 Sum_probs=52.6
Q ss_pred HhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 126 ETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 126 l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
....|.+.....+.++.++|..+..+.+....|..+|.++..+.+.+..++.. ..+++.+.|+++.++.
T Consensus 112 ~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~-----~i~vn~i~PG~v~T~~ 180 (258)
T PRK06398 112 KYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-----TIRCVAVCPGSIRTPL 180 (258)
T ss_pred HHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhCC-----CCEEEEEecCCccchH
Confidence 33456666556789999999888877888889999999999988888766532 3788888888776543
No 155
>PRK06484 short chain dehydrogenase; Validated
Probab=60.59 E-value=14 Score=36.22 Aligned_cols=65 Identities=34% Similarity=0.444 Sum_probs=52.6
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.| ...|.++.++|..+..+.+....|..+|..+.++.+.+..++.. .+++++.+.|+++.+..
T Consensus 387 ~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~----~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 387 ARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAP----AGIRVNTVAPGYIETPA 451 (520)
T ss_pred HHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhh----hCeEEEEEEeCCccCch
Confidence 4555 33578999999988888888889999999999999988877754 37899999999886653
No 156
>PRK09242 tropinone reductase; Provisional
Probab=60.54 E-value=22 Score=30.89 Aligned_cols=67 Identities=25% Similarity=0.384 Sum_probs=51.0
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.....+.++.+++..+..+.+....|..+|..+..+...+..++.. .+.+++.+.|+++.++
T Consensus 130 ~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~i~Pg~i~t~ 196 (257)
T PRK09242 130 AHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAE----DGIRVNAVAPWYIRTP 196 (257)
T ss_pred HHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHH----hCeEEEEEEECCCCCc
Confidence 345555555678888888888777778888999999999888887776643 3678888889877654
No 157
>PRK08265 short chain dehydrogenase; Provisional
Probab=60.35 E-value=14 Score=32.41 Aligned_cols=67 Identities=25% Similarity=0.302 Sum_probs=50.8
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
...|.+. +..+.++.++|..+..+.+....|+.+|..+..+.+.+..++.. .+.+++.+.|+++.+.
T Consensus 120 ~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~----~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 120 AAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAP----DGIRVNSVSPGWTWSR 186 (261)
T ss_pred HHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcc----cCEEEEEEccCCccCh
Confidence 3345554 44578999998888877888888999999999888887766543 4788889999876554
No 158
>PRK06484 short chain dehydrogenase; Validated
Probab=60.18 E-value=17 Score=35.59 Aligned_cols=78 Identities=35% Similarity=0.468 Sum_probs=57.8
Q ss_pred cccHHHHHHhcchhhHhhcCc-eEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 118 LKNLQIILETFLPDMMEKNRG-HIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 118 l~~L~~L~l~~~p~~~~~~~g-~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
+.....+.....|.+.....+ .++.++|..+..+.+....|+.+|.++.++.+.+..++... +.+++.+.|+.+.
T Consensus 113 ~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~----~i~v~~i~Pg~v~ 188 (520)
T PRK06484 113 LTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAK----GIRVNAVLPGYVR 188 (520)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEccCCcC
Confidence 333344444456666655555 89999998888888888899999999999999888877543 6788888888775
Q ss_pred cCC
Q psy5270 197 TGL 199 (352)
Q Consensus 197 ~~~ 199 (352)
+..
T Consensus 189 t~~ 191 (520)
T PRK06484 189 TQM 191 (520)
T ss_pred chh
Confidence 543
No 159
>PRK07478 short chain dehydrogenase; Provisional
Probab=60.05 E-value=15 Score=31.91 Aligned_cols=67 Identities=30% Similarity=0.519 Sum_probs=50.8
Q ss_pred cchhhHhhcCceEeeccccccc-cCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGI-VGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l-~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.....+.++.++|..+. .+.+....|..+|.++.++.+.+..++.. .+.+++.+.|+++.++
T Consensus 126 ~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 126 QIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGA----QGIRVNALLPGGTDTP 193 (254)
T ss_pred HHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHHHHHhh----cCEEEEEEeeCcccCc
Confidence 3555555556788888887665 45677788999999999998888777653 3688888999887665
No 160
>PRK06841 short chain dehydrogenase; Provisional
Probab=59.99 E-value=19 Score=31.31 Aligned_cols=67 Identities=37% Similarity=0.481 Sum_probs=51.0
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.....+.++.+++..+..+.+....|+.+|.++..+.+.+..++.. .+.+++.+.|+.+.+.
T Consensus 131 ~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~v~pg~v~t~ 197 (255)
T PRK06841 131 VGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGP----YGITVNAISPTVVLTE 197 (255)
T ss_pred HHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHh----hCeEEEEEEeCcCcCc
Confidence 345555555678998888877777888888999999998888888777653 3678888889877554
No 161
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=59.85 E-value=17 Score=31.89 Aligned_cols=75 Identities=28% Similarity=0.418 Sum_probs=54.8
Q ss_pred cHHHHHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 120 NLQIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 120 ~L~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
....+.....|.+.....+.++.+++..+..+.+....|..+|.++..+...+..++.. .+++++.+.|+.+.++
T Consensus 121 ~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~----~gi~v~~v~Pg~v~t~ 195 (265)
T PRK07097 121 APFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGE----ANIQCNGIGPGYIATP 195 (265)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHHhhh----cCceEEEEEecccccc
Confidence 33333444456666656788998888777666777788999999999888888776643 3688999999887654
No 162
>KOG3864|consensus
Probab=59.68 E-value=1.1 Score=37.71 Aligned_cols=79 Identities=23% Similarity=0.272 Sum_probs=51.9
Q ss_pred CCCEEEccCCcCccc-ccccCCCCCCcEEEccCCC-CCcc-ccccC-CCCCCCEEEccCCC-CCCCCCCCccccCccCcE
Q psy5270 26 NLEILTLFNNQIETL-PTSLSSLPKLRILNLGMNR-LSSL-PRGFG-AFPVLEVLDLTYNN-LNEQSLPGNFFMLETLRA 100 (352)
Q Consensus 26 ~L~~L~L~~N~l~~i-p~~l~~L~~L~~L~L~~N~-l~~i-p~~~~-~l~~L~~L~Ls~N~-l~g~~~p~~~~~l~~L~~ 100 (352)
.++.+|-++..+..+ -+.+.+++.++.|.+.+++ +... -+.++ -.++|+.|++++|. +|. .--..+..+++|+.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~-~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITD-GGLACLLKLKNLRR 180 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeech-hHHHHHHHhhhhHH
Confidence 478888888887633 2457778888888877763 3311 11122 35789999999885 654 22345667788888
Q ss_pred EEccC
Q psy5270 101 LYLGD 105 (352)
Q Consensus 101 L~l~~ 105 (352)
|.+.+
T Consensus 181 L~l~~ 185 (221)
T KOG3864|consen 181 LHLYD 185 (221)
T ss_pred HHhcC
Confidence 87654
No 163
>PRK07904 short chain dehydrogenase; Provisional
Probab=59.33 E-value=17 Score=31.76 Aligned_cols=67 Identities=25% Similarity=0.293 Sum_probs=49.7
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.....+.++.++|..+..+.+....|+.+|.++..+.+.+..++. ..+.+++.+.|+.+.++
T Consensus 129 l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~----~~~i~v~~v~Pg~v~t~ 195 (253)
T PRK07904 129 LGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALR----EYGVRVLVVRPGQVRTR 195 (253)
T ss_pred HHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh----hcCCEEEEEeeCceecc
Confidence 34566666678999998877655556666789999999888877766554 34788889999887664
No 164
>PRK07831 short chain dehydrogenase; Provisional
Probab=58.04 E-value=16 Score=32.06 Aligned_cols=68 Identities=24% Similarity=0.236 Sum_probs=51.0
Q ss_pred cchhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+.... .+.++.+++..+....+....|+.+|.++.++.+.+..++.. .+++++.+.|+.+.++.
T Consensus 139 ~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~----~gI~v~~i~Pg~~~t~~ 207 (262)
T PRK07831 139 ALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAE----YGVRINAVAPSIAMHPF 207 (262)
T ss_pred HHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhCc----cCeEEEEEeeCCccCcc
Confidence 355555544 678888888777777777888999999999998888776643 36788888898776543
No 165
>PRK07985 oxidoreductase; Provisional
Probab=57.31 E-value=19 Score=32.32 Aligned_cols=59 Identities=27% Similarity=0.345 Sum_probs=48.0
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.++.++|..+..+.+....|+.+|.++..+...+..++... +++++.+.|+.+.++.
T Consensus 178 ~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~----gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 178 GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK----GIRVNIVAPGPIWTAL 236 (294)
T ss_pred CCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHhHh----CcEEEEEECCcCcccc
Confidence 4788888888888778888899999999999988888777543 6888888998876653
No 166
>KOG3864|consensus
Probab=57.07 E-value=4 Score=34.51 Aligned_cols=83 Identities=16% Similarity=0.038 Sum_probs=56.7
Q ss_pred CCcEEEccCCCCCcc-ccccCCCCCCCEEEccCCCCCCCCCCCcccc-CccCcEEEccCCc-cc-cchhhccCcccHHHH
Q psy5270 49 KLRILNLGMNRLSSL-PRGFGAFPVLEVLDLTYNNLNEQSLPGNFFM-LETLRALYLGDND-FE-VLPAEIGNLKNLQII 124 (352)
Q Consensus 49 ~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~-l~~L~~L~l~~N~-l~-~ip~~~~nl~~L~~L 124 (352)
.++.+|-++..+..+ -+.+.++++++.|.+.+++--+----+-+++ .++|+.|++++|. |+ .=-.++..+++|+.+
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 477888888777633 2347788889999888886432000011223 3689999999885 77 334688889999998
Q ss_pred HHhcchh
Q psy5270 125 LETFLPD 131 (352)
Q Consensus 125 ~l~~~p~ 131 (352)
.+..+|.
T Consensus 182 ~l~~l~~ 188 (221)
T KOG3864|consen 182 HLYDLPY 188 (221)
T ss_pred HhcCchh
Confidence 8877554
No 167
>PRK06125 short chain dehydrogenase; Provisional
Probab=56.56 E-value=13 Score=32.41 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=49.8
Q ss_pred HHHhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 124 ILETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 124 L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
+.....|.+.....+.++.+++..+..+.+....|+.+|.++.++.+.+..++. -.+++++.+.|+.+.++
T Consensus 119 ~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~e~~----~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 119 LTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSL----DDGVRVVGVNPGPVATD 189 (259)
T ss_pred HHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHHHhC----ccCeEEEEEecCccccH
Confidence 333445666655567888888776665556666778888888888877766543 34788999999877654
No 168
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=56.10 E-value=20 Score=31.14 Aligned_cols=69 Identities=32% Similarity=0.368 Sum_probs=49.7
Q ss_pred hcchhhHhhcCceEeecccccccc-CCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIV-GLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~-~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
...|.+.....+.++.++|..+.. ..+....|+.+|.++.++.+.+..++.. .+.+++.+.|+++.++.
T Consensus 120 ~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~----~~i~v~~i~Pg~v~t~~ 189 (255)
T PRK06463 120 EFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGK----YGIRVNAVAPGWVETDM 189 (255)
T ss_pred HHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhhh----cCeEEEEEeeCCCCCch
Confidence 335555555568898888876664 3345567999999999998888776643 36788889998776643
No 169
>PRK06172 short chain dehydrogenase; Provisional
Probab=56.00 E-value=16 Score=31.72 Aligned_cols=68 Identities=34% Similarity=0.536 Sum_probs=52.0
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+.....+.++.+++..+..+.+....|..+|.++.++...+..++.. .+.+++.+.|+.+.+..
T Consensus 127 ~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~----~~i~v~~i~PG~v~t~~ 194 (253)
T PRK06172 127 QIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAK----KGIRVNAVCPAVIDTDM 194 (253)
T ss_pred HHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcc----cCeEEEEEEeCCccChh
Confidence 345555555678888888888888888888999999998888877766643 36888889998776543
No 170
>KOG1947|consensus
Probab=55.78 E-value=5.7 Score=38.12 Aligned_cols=102 Identities=23% Similarity=0.170 Sum_probs=63.8
Q ss_pred CCCccEEEeeCC--cCcccC----ccccCCCCCCEEEccCCc-Cccc-ccccC-CCCCCcEEEccCCC-CC--ccccccC
Q psy5270 1 MLYITRITLSHN--KLKEIP----PGLANLVNLEILTLFNNQ-IETL-PTSLS-SLPKLRILNLGMNR-LS--SLPRGFG 68 (352)
Q Consensus 1 l~~L~~L~Ls~N--~l~~ip----~~l~~l~~L~~L~L~~N~-l~~i-p~~l~-~L~~L~~L~L~~N~-l~--~ip~~~~ 68 (352)
++.|+.|+++++ ..+..+ .-...+.+|+.|+++... ++.. -..+. .+++|+.|.+..+. ++ .+-.-..
T Consensus 213 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~ 292 (482)
T KOG1947|consen 213 CPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAE 292 (482)
T ss_pred CchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHH
Confidence 357899999873 222222 224456889999999988 5522 12233 37899999977776 55 3444456
Q ss_pred CCCCCCEEEccCCCCCC-CCCCCccccCccCcEEE
Q psy5270 69 AFPVLEVLDLTYNNLNE-QSLPGNFFMLETLRALY 102 (352)
Q Consensus 69 ~l~~L~~L~Ls~N~l~g-~~~p~~~~~l~~L~~L~ 102 (352)
.+++|+.|+++++.... ..+.....++++|+.|.
T Consensus 293 ~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~ 327 (482)
T KOG1947|consen 293 RCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELK 327 (482)
T ss_pred hcCcccEEeeecCccchHHHHHHHHHhCcchhhhh
Confidence 78889999999887532 11233333455555543
No 171
>PRK07035 short chain dehydrogenase; Provisional
Probab=55.68 E-value=23 Score=30.65 Aligned_cols=67 Identities=27% Similarity=0.300 Sum_probs=50.3
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+.....+.++.+++..+..+.+....|..+|..+..+.+.+..++.. .+.+++.+.|+.+.+..
T Consensus 129 ~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~----~gi~v~~i~PG~v~t~~ 195 (252)
T PRK07035 129 GKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAP----FGIRVNALLPGLTDTKF 195 (252)
T ss_pred HHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhh----cCEEEEEEeeccccCcc
Confidence 45555555678888888777766777778999999998888887766643 37888899998776643
No 172
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=55.66 E-value=9 Score=33.16 Aligned_cols=60 Identities=35% Similarity=0.517 Sum_probs=49.1
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.++.+++.......+....|..+|.++.++.+.++.++.. ..+++++.+.|+.+.+..
T Consensus 126 ~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~~---~~gIrVN~V~pG~i~t~~ 185 (241)
T PF13561_consen 126 GGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELAP---KKGIRVNAVSPGPIETPM 185 (241)
T ss_dssp EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHGG---HGTEEEEEEEESSBSSHH
T ss_pred CCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhcc---ccCeeeeeecccceeccc
Confidence 378888888887777888889999999999999999888764 138999999999886543
No 173
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=55.65 E-value=24 Score=30.11 Aligned_cols=67 Identities=33% Similarity=0.473 Sum_probs=50.5
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.....+.++.+++..+..+.+....|..+|..+.++...+..++.. .+.+++.+.|+.+.+.
T Consensus 110 ~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~----~gi~v~~v~pg~v~t~ 176 (235)
T PRK06550 110 YLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAK----DGIQVFGIAPGAVKTP 176 (235)
T ss_pred HHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhhh----cCeEEEEEeeCCccCc
Confidence 345555555678888888877777777788999999998888887776643 4788888889877554
No 174
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=55.47 E-value=26 Score=30.63 Aligned_cols=66 Identities=27% Similarity=0.428 Sum_probs=50.4
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
...+.+.....+.++.++|..+..+.+....|..+|.++.++.+.+..++.. .+.+++.+.|+.+.
T Consensus 127 ~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~----~gi~v~~v~pG~~~ 192 (266)
T PRK06171 127 AVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGK----HNIRVVGVAPGILE 192 (266)
T ss_pred HHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHhhh----cCeEEEEEeccccc
Confidence 3345555555678999988888777777888999999999988888776643 37888888888664
No 175
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=54.23 E-value=11 Score=34.10 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=52.0
Q ss_pred HHHHHhcchhhHhhcCceEeeccccccccCCCCcc-ccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 122 QIILETFLPDMMEKNRGHIVGISSMAGIVGLPNLV-PYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 122 ~~L~l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~-~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..+.....|.|.. .|.++.+++..+..+.|... .|+.+|.++.++.+.+..++.. ..+++++.+.|+.+.+.
T Consensus 157 ~~l~~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~---~~gIrVn~V~PG~v~T~ 229 (299)
T PRK06300 157 VSLLSHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGR---RWGIRVNTISAGPLASR 229 (299)
T ss_pred HHHHHHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEEEeCCccCh
Confidence 3333444566643 47788888777776777654 7999999999999988877642 13789999999887664
No 176
>PRK05872 short chain dehydrogenase; Provisional
Probab=54.05 E-value=21 Score=32.11 Aligned_cols=67 Identities=33% Similarity=0.557 Sum_probs=51.7
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+.. ..|.++.++|..+..+.+....|+.+|..+..+...+..++.. .+.+++.+.|+++.+..
T Consensus 127 ~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~----~gi~v~~v~Pg~v~T~~ 193 (296)
T PRK05872 127 TLPALIE-RRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAH----HGVTVGSAYLSWIDTDL 193 (296)
T ss_pred HHHHHHH-cCCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH----HCcEEEEEecCcccchh
Confidence 3455544 3578999999888888888889999999999988888776654 36788888898876654
No 177
>PRK06179 short chain dehydrogenase; Provisional
Probab=53.62 E-value=27 Score=30.61 Aligned_cols=68 Identities=35% Similarity=0.549 Sum_probs=51.2
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
...|.+.....+.++.++|..+..+.|....|..+|..+..+...+..++.. .+.+++.+.|+++.+.
T Consensus 114 ~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~----~gi~v~~v~pg~~~t~ 181 (270)
T PRK06179 114 AVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQ----FGIRVSLVEPAYTKTN 181 (270)
T ss_pred HHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHhh----hCcEEEEEeCCCcccc
Confidence 3345565666788999998888777777778999999988888777766543 3778888888876554
No 178
>PRK06523 short chain dehydrogenase; Provisional
Probab=53.60 E-value=28 Score=30.34 Aligned_cols=67 Identities=24% Similarity=0.470 Sum_probs=48.8
Q ss_pred cchhhHhhcCceEeeccccccccCCC-CccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLP-NLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp-~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.....+.++.++|..+..+.+ ....|+.+|..+.++...+..++.. .+.+++.+.|+.+.++
T Consensus 121 ~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~----~gi~v~~i~Pg~v~t~ 188 (260)
T PRK06523 121 LLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAP----KGVRVNTVSPGWIETE 188 (260)
T ss_pred HHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhh----cCcEEEEEecCcccCc
Confidence 34555555557888888877766655 6678999999988888877766543 3688888888877654
No 179
>KOG4341|consensus
Probab=53.46 E-value=4.4 Score=38.08 Aligned_cols=14 Identities=36% Similarity=0.458 Sum_probs=7.2
Q ss_pred CCCCCCEEEccCCC
Q psy5270 69 AFPVLEVLDLTYNN 82 (352)
Q Consensus 69 ~l~~L~~L~Ls~N~ 82 (352)
+++.|++|.++++.
T Consensus 370 ~C~~lr~lslshce 383 (483)
T KOG4341|consen 370 NCPRLRVLSLSHCE 383 (483)
T ss_pred CCchhccCChhhhh
Confidence 44555555555444
No 180
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=53.35 E-value=15 Score=32.14 Aligned_cols=66 Identities=29% Similarity=0.384 Sum_probs=49.8
Q ss_pred chhhHhh--cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEK--NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~--~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|.+... ..+.++.++|..+..+.+....|+.+|.++.++.+.+..++. -.+++++.+.|+++.+.
T Consensus 133 ~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~----~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 133 LKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEK----NPNVRVLNYAPGVLDTD 200 (256)
T ss_pred HHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhc----CCCeEEEEecCCcccch
Confidence 4444433 246888888888877778888899999999998888776654 34688888999888664
No 181
>KOG3763|consensus
Probab=52.01 E-value=6.7 Score=38.17 Aligned_cols=61 Identities=30% Similarity=0.348 Sum_probs=39.4
Q ss_pred CCCCCcEEEccCCCCCcc---ccccCCCCCCCEEEccCC--CCCCCCCCCccccC--ccCcEEEccCCccc
Q psy5270 46 SLPKLRILNLGMNRLSSL---PRGFGAFPVLEVLDLTYN--NLNEQSLPGNFFML--ETLRALYLGDNDFE 109 (352)
Q Consensus 46 ~L~~L~~L~L~~N~l~~i---p~~~~~l~~L~~L~Ls~N--~l~g~~~p~~~~~l--~~L~~L~l~~N~l~ 109 (352)
+.+.+..+.|++|++..+ ..--...++|..|+|++| .+.- -.++..+ ..|++|.+.+|.+.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~---~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISS---ESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcc---hhhhhhhcCCCHHHeeecCCccc
Confidence 455677788888887644 222344577888999988 4332 2233333 35788889998875
No 182
>PRK05884 short chain dehydrogenase; Provisional
Probab=51.29 E-value=23 Score=30.29 Aligned_cols=62 Identities=13% Similarity=0.027 Sum_probs=45.5
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
...|.|.. .|.|+.+++.. .+....|..+|.++.++.+.+..++.. .+++++.+.|+++.++
T Consensus 115 ~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~e~~~----~gI~v~~v~PG~v~t~ 176 (223)
T PRK05884 115 SVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFGT----RGITINAVACGRSVQP 176 (223)
T ss_pred HHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHHHhhh----cCeEEEEEecCccCch
Confidence 33455532 47888887754 345567999999999999888777654 3789999999987654
No 183
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=51.12 E-value=25 Score=30.71 Aligned_cols=68 Identities=29% Similarity=0.353 Sum_probs=49.2
Q ss_pred HhcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 126 ETFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 126 l~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
....|.+... .+.++.++|..+..+.+....|+.+|.++.++.+.++.++.. .++++.+.|+.+.++.
T Consensus 124 ~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~-----~irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 124 KAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAP-----YVRVNGVAPGGMSSDL 191 (262)
T ss_pred HHHHHHHhhc-CCCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHHHhhcc-----CeEEEEEecCCCcCCC
Confidence 3334555443 467777777777766677778999999999998888776642 3788899998876653
No 184
>KOG1204|consensus
Probab=50.75 E-value=10 Score=32.67 Aligned_cols=65 Identities=29% Similarity=0.432 Sum_probs=48.1
Q ss_pred chhhHhh-cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEK-NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~-~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
+|...+. ..+.+++++|...+..++.+..||.+|.+...+...++.|-. .+.+.-...|+.+++.
T Consensus 128 l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~EEp-----~~v~vl~~aPGvvDT~ 193 (253)
T KOG1204|consen 128 LPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVLASEEP-----FDVRVLNYAPGVVDTQ 193 (253)
T ss_pred HHHhcCCCccCeEEEecchhhhccccHHHHhhhhHHHHHHHHHHHhhcCc-----cceeEEEccCCcccch
Confidence 4444444 368899999999999999999999999999988877765543 1445556677766553
No 185
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=50.75 E-value=23 Score=30.61 Aligned_cols=66 Identities=30% Similarity=0.415 Sum_probs=48.6
Q ss_pred chhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.... .+.++.+++..+..+.+....|+.+|.++..+.+.+..++.. .+.+++.+.|+.+.+.
T Consensus 123 ~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~----~gi~v~~v~pg~v~t~ 189 (248)
T TIGR01832 123 AKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEWAA----KGINVNAIAPGYMATN 189 (248)
T ss_pred HHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHhCc----cCcEEEEEEECcCcCc
Confidence 44454443 578888888777766677778999999998888888776642 3688888889877654
No 186
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=50.56 E-value=7.1 Score=20.86 Aligned_cols=13 Identities=23% Similarity=0.363 Sum_probs=9.7
Q ss_pred HHhhhhhhhhhhC
Q psy5270 340 VKRMKILQSWYRR 352 (352)
Q Consensus 340 ~~~~~~~~~~~~~ 352 (352)
.+....+|+|||+
T Consensus 3 ~~aa~~IQa~~Rg 15 (26)
T smart00015 3 TRAAIIIQAAWRG 15 (26)
T ss_pred HHHHHHHHHHHHH
Confidence 4566788999984
No 187
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=50.38 E-value=9.6 Score=44.28 Aligned_cols=31 Identities=42% Similarity=0.562 Sum_probs=27.4
Q ss_pred EeeCCcCcccCcc-ccCCCCCCEEEccCCcCc
Q psy5270 8 TLSHNKLKEIPPG-LANLVNLEILTLFNNQIE 38 (352)
Q Consensus 8 ~Ls~N~l~~ip~~-l~~l~~L~~L~L~~N~l~ 38 (352)
||++|+|+.||.+ |..+++|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 6899999999875 778999999999999776
No 188
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=49.48 E-value=11 Score=43.83 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=25.4
Q ss_pred EccCCcCccccc-ccCCCCCCcEEEccCCCCC
Q psy5270 31 TLFNNQIETLPT-SLSSLPKLRILNLGMNRLS 61 (352)
Q Consensus 31 ~L~~N~l~~ip~-~l~~L~~L~~L~L~~N~l~ 61 (352)
||++|+|+.||. .|..|.+|+.|+|++|-+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 578899988865 6777888999999988876
No 189
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=49.42 E-value=28 Score=30.06 Aligned_cols=67 Identities=27% Similarity=0.253 Sum_probs=46.7
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.....+.++.+++.......+....|..+|.++..+.+.+..++. ..+.+++.+.|+++.+.
T Consensus 129 ~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~----~~~i~v~~i~pG~v~t~ 195 (253)
T PRK08642 129 ALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELG----PYGITVNMVSGGLLRTT 195 (253)
T ss_pred HHHHHHhcCCeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHHHHhC----ccCeEEEEEeecccCCc
Confidence 34555455567888887765554555566899999999888887766553 34678888888877553
No 190
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=48.89 E-value=34 Score=29.67 Aligned_cols=66 Identities=33% Similarity=0.388 Sum_probs=49.9
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|+.+|.++.++...+..++.. .+.+++.+.|+.+.+.
T Consensus 131 ~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~i~pg~v~t~ 196 (256)
T PRK06124 131 AQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP----HGITSNAIAPGYFATE 196 (256)
T ss_pred HHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHHHHH----hCcEEEEEEECCccCc
Confidence 44454455678888888887777788888999999998888887776643 3678888888877654
No 191
>PLN02253 xanthoxin dehydrogenase
Probab=48.43 E-value=33 Score=30.30 Aligned_cols=66 Identities=32% Similarity=0.447 Sum_probs=49.3
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.++|..+..+.+....|..+|.++..+.+.+..++.. .+.+++.+.|+.+.+.
T Consensus 139 ~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 139 ARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGK----HGIRVNCVSPYAVPTA 204 (280)
T ss_pred HHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHHHhhh----cCeEEEEEeeCccccc
Confidence 45555555678888888777666666778999999999888888776653 3678888888877554
No 192
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=47.89 E-value=34 Score=29.72 Aligned_cols=66 Identities=29% Similarity=0.406 Sum_probs=48.9
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|+.+|..+..+.+.+..++.. .+.+++.+.|+.+.+.
T Consensus 138 ~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~i~Pg~~~t~ 203 (256)
T PRK12748 138 AKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAE----KGITVNAVNPGPTDTG 203 (256)
T ss_pred HHHhhhcCCeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHHH----hCeEEEEEEeCcccCC
Confidence 34444445578888888777777777788999999999988887776643 3688888889876554
No 193
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=47.78 E-value=39 Score=29.49 Aligned_cols=66 Identities=30% Similarity=0.415 Sum_probs=49.7
Q ss_pred chhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.... .+.++.+++..+..+.+....|..+|.++..+.+.+..++.. .+.+++.+.|+.+.+.
T Consensus 128 l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~----~gi~v~~v~pg~v~t~ 194 (261)
T PRK08936 128 IKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAP----KGIRVNNIGPGAINTP 194 (261)
T ss_pred HHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHHHHHhh----cCeEEEEEEECcCCCC
Confidence 44444433 578888888877777788888999999999888887776643 3688888888877654
No 194
>PRK06180 short chain dehydrogenase; Provisional
Probab=47.15 E-value=37 Score=30.01 Aligned_cols=68 Identities=41% Similarity=0.699 Sum_probs=49.5
Q ss_pred hcchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
...|.+.....+.++.++|..+..+.+....|+.+|..+.++...+..++.. .+.+++.+.|+.+.++
T Consensus 119 ~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~Pg~v~t~ 186 (277)
T PRK06180 119 AVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAP----FGIHVTAVEPGSFRTD 186 (277)
T ss_pred HHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhh----hCcEEEEEecCCcccC
Confidence 3345555555678988988888877888888999999888887777665543 3678888888766543
No 195
>PRK06182 short chain dehydrogenase; Validated
Probab=46.58 E-value=28 Score=30.62 Aligned_cols=67 Identities=36% Similarity=0.438 Sum_probs=48.5
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+|.+.....+.++.++|..+....+....|+.+|..+.++.+.+..++. -.+.+++.+.|+.+.++
T Consensus 116 ~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~----~~gi~v~~v~Pg~v~t~ 182 (273)
T PRK06182 116 VLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVA----PFGIDVVVIEPGGIKTE 182 (273)
T ss_pred HHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhc----ccCCEEEEEecCCcccc
Confidence 34555555567899988877666666666789999988888777766543 34678888888877654
No 196
>PRK07578 short chain dehydrogenase; Provisional
Probab=46.49 E-value=22 Score=29.62 Aligned_cols=57 Identities=19% Similarity=0.224 Sum_probs=44.9
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.++.+++..+..+.+....|+.+|.++.++.+.+..++ . .+.+++.+.|+++.+.
T Consensus 104 ~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~----~gi~v~~i~Pg~v~t~ 160 (199)
T PRK07578 104 GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-P----RGIRINVVSPTVLTES 160 (199)
T ss_pred CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-c----CCeEEEEEcCCcccCc
Confidence 4678888887777777888889999999999888777665 2 3688889999877543
No 197
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=45.80 E-value=46 Score=29.03 Aligned_cols=65 Identities=32% Similarity=0.299 Sum_probs=49.0
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+.. ..+.++.++|..+..+.+....|..+|.++.++.+.++.++.. +++++.+.|+++.+..
T Consensus 128 ~~~~~~-~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~-----~Irvn~i~PG~i~t~~ 192 (263)
T PRK06200 128 LPALKA-SGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAP-----KIRVNGVAPGGTVTDL 192 (263)
T ss_pred HHHHHh-cCCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhc-----CcEEEEEeCCccccCC
Confidence 444333 3478888888777776677778999999999999888877643 3888999998886653
No 198
>PRK07109 short chain dehydrogenase; Provisional
Probab=45.12 E-value=37 Score=31.24 Aligned_cols=70 Identities=33% Similarity=0.504 Sum_probs=53.9
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+.....+.++.++|..+..+.+....|+.+|..+.++.+.+..++... ..+++++.+.|+.+.++.
T Consensus 127 ~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~--~~~I~v~~v~Pg~v~T~~ 196 (334)
T PRK07109 127 ALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHD--GSPVSVTMVQPPAVNTPQ 196 (334)
T ss_pred HHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEEeCCCccCch
Confidence 3555666566899999998888888888889999999999888887776431 246788888898877654
No 199
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=44.73 E-value=40 Score=28.80 Aligned_cols=61 Identities=34% Similarity=0.547 Sum_probs=47.9
Q ss_pred hcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 135 KNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 135 ~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
...+.++.++|..+..+.+....|..+|..+.++.+.+..++... +.+++.+.|+.+.++.
T Consensus 126 ~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 126 RQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKR----KITVNCIAPGLIDTEM 186 (239)
T ss_pred cCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHHhHh----CeEEEEEEEccCcccc
Confidence 345788888888888888888889999998888888887776543 6888888898776543
No 200
>COG1740 HyaA Ni,Fe-hydrogenase I small subunit [Energy production and conversion]
Probab=44.57 E-value=42 Score=30.63 Aligned_cols=52 Identities=31% Similarity=0.627 Sum_probs=35.3
Q ss_pred CCceeeeccccccCCccccccccc--ccCCCccc---ccceecCCCCCCHHHHHHHHH
Q psy5270 282 EPRWVISMGSCANGGGYYHYSYSV--VRGCDRII---PVDIYVPGCPPTAEALMYGIL 334 (352)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~gcpp~~~~~~~~~~ 334 (352)
.....+..|+|.+.+|+-....|- ..+++.+. |+ +.+|||||.|.-|..-+.
T Consensus 147 ~A~aIiAvGtCAs~GgI~AA~pnps~a~~i~ev~~~kpV-INiPGCPp~pd~iv~tl~ 203 (355)
T COG1740 147 GASAIIAVGTCASWGGIQAAKPNPTGAGPLSEVIKDKPV-INIPGCPPNPDWIVATLL 203 (355)
T ss_pred cCceEEEEecccccCCeeccCCCCCCcccceecccCCce-eeCCCCCCCchhHHHHHH
Confidence 456678899999988876555443 33444443 33 789999999987774444
No 201
>PRK05650 short chain dehydrogenase; Provisional
Probab=44.35 E-value=38 Score=29.74 Aligned_cols=66 Identities=33% Similarity=0.495 Sum_probs=49.5
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|.+.....+.++.++|..+..+.+....|..+|..+.++...+..++. -.+..++.+.|+.+.+.
T Consensus 120 ~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~----~~gi~v~~v~Pg~v~t~ 185 (270)
T PRK05650 120 LPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELA----DDEIGVHVVCPSFFQTN 185 (270)
T ss_pred HHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc----ccCcEEEEEecCccccC
Confidence 4455444557888888888888888888899999998888887776653 23678888888877654
No 202
>PRK07832 short chain dehydrogenase; Provisional
Probab=44.32 E-value=46 Score=29.24 Aligned_cols=69 Identities=43% Similarity=0.656 Sum_probs=50.4
Q ss_pred hcchhhHhh-cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 127 TFLPDMMEK-NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 127 ~~~p~~~~~-~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
...|.+... ..+.++.+++..+..+.+....|..+|.++.++.+.+..++.. .+.+++.+.|+.+.++.
T Consensus 119 ~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~----~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 119 TFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLAR----HGIGVSVVVPGAVKTPL 188 (272)
T ss_pred HHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhh----cCcEEEEEecCcccCcc
Confidence 334555443 3478888888877777788888999999998888877766543 46888888898776554
No 203
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=43.21 E-value=48 Score=28.74 Aligned_cols=66 Identities=27% Similarity=0.458 Sum_probs=48.7
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|..+|..+.++.+.+..++... +.+++.+.|+.+.++
T Consensus 130 ~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~----gi~v~~i~pg~~~t~ 195 (255)
T PRK07523 130 ARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKH----GLQCNAIAPGYFDTP 195 (255)
T ss_pred HHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHHhhHh----CeEEEEEEECcccCc
Confidence 444544556788888887777677777889999999988888887766543 678888888766543
No 204
>KOG1199|consensus
Probab=43.15 E-value=7.7 Score=31.83 Aligned_cols=65 Identities=31% Similarity=0.438 Sum_probs=50.3
Q ss_pred hhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCccC
Q psy5270 134 EKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLCKN 202 (352)
Q Consensus 134 ~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l~~ 202 (352)
+..+|.|++..|...+.+-.....|..++.++.++.-.++.. +.-.++++..+.|+.++++.+..
T Consensus 143 ~gqrgviintasvaafdgq~gqaaysaskgaivgmtlpiard----la~~gir~~tiapglf~tpllss 207 (260)
T KOG1199|consen 143 NGQRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIARD----LAGDGIRFNTIAPGLFDTPLLSS 207 (260)
T ss_pred CCcceEEEeeceeeeecCccchhhhhcccCceEeeechhhhh----cccCceEEEeecccccCChhhhh
Confidence 446788888888888888888889999999998876555433 34458899999999888776543
No 205
>PRK05867 short chain dehydrogenase; Provisional
Probab=42.81 E-value=62 Score=28.01 Aligned_cols=74 Identities=34% Similarity=0.479 Sum_probs=50.0
Q ss_pred HHHHHhcchhhHhhc-CceEeecccccccc-CCC-CccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 122 QIILETFLPDMMEKN-RGHIVGISSMAGIV-GLP-NLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 122 ~~L~l~~~p~~~~~~-~g~i~~iss~~~l~-~lp-~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..+.....|.+..+. .+.++.+++..+.. ..+ ....|..+|.++.++.+.+..++... +++++.+.|+.+.++
T Consensus 122 ~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~----gI~vn~i~PG~v~t~ 197 (253)
T PRK05867 122 FLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPH----KIRVNSVSPGYILTE 197 (253)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHh----CeEEEEeecCCCCCc
Confidence 333333455555443 36788777765542 233 34679999999999999888777543 788999999988665
Q ss_pred C
Q psy5270 199 L 199 (352)
Q Consensus 199 ~ 199 (352)
.
T Consensus 198 ~ 198 (253)
T PRK05867 198 L 198 (253)
T ss_pred c
Confidence 4
No 206
>PRK08703 short chain dehydrogenase; Provisional
Probab=42.52 E-value=48 Score=28.37 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=49.5
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+.....+.++.+++..+..+.+....|..+|.++..+...++.++.. ..+.+++.+.|+.+.++.
T Consensus 131 ~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~---~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 131 FPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWER---FGNLRANVLVPGPINSPQ 198 (239)
T ss_pred HHHHHhCCCCEEEEEeccccccCCCCccchHHhHHHHHHHHHHHHHHhcc---CCCeEEEEEecCcccCcc
Confidence 34444444678888888777777777788999999998888877766532 125788888998887654
No 207
>PRK05866 short chain dehydrogenase; Provisional
Probab=42.27 E-value=35 Score=30.63 Aligned_cols=67 Identities=24% Similarity=0.421 Sum_probs=48.4
Q ss_pred chhhHhhcCceEeecccccccc-CCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIV-GLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~-~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+.....+.++.+++..... ..+....|+.+|.++.++...+..++.. .+++++.+.|+.+.+..
T Consensus 162 ~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~----~gI~v~~v~pg~v~T~~ 229 (293)
T PRK05866 162 APGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGD----RGVHSTTLYYPLVATPM 229 (293)
T ss_pred HHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcc----cCcEEEEEEcCcccCcc
Confidence 4556566668888888765554 3566678999999999988887766643 36788888888776654
No 208
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=42.21 E-value=15 Score=18.44 Aligned_cols=12 Identities=42% Similarity=0.650 Sum_probs=8.8
Q ss_pred HhhhhhhhhhhC
Q psy5270 341 KRMKILQSWYRR 352 (352)
Q Consensus 341 ~~~~~~~~~~~~ 352 (352)
++...+|++||.
T Consensus 2 ~aai~iQ~~~R~ 13 (21)
T PF00612_consen 2 KAAIIIQSYWRG 13 (21)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 356778999983
No 209
>PRK07201 short chain dehydrogenase; Provisional
Probab=42.18 E-value=38 Score=34.24 Aligned_cols=68 Identities=34% Similarity=0.465 Sum_probs=53.3
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCCc
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGLC 200 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~l 200 (352)
.|.+.....+.++.++|..+..+.+....|..+|..+.++...+..++.. .+.+++.+.|+.+.++..
T Consensus 493 ~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~v~pg~v~T~~~ 560 (657)
T PRK07201 493 LPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLS----DGITFTTIHMPLVRTPMI 560 (657)
T ss_pred HHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHh----hCCcEEEEECCcCccccc
Confidence 45555556688999999888877787788999999999988888777654 368888999998876543
No 210
>PRK08263 short chain dehydrogenase; Provisional
Probab=42.14 E-value=50 Score=29.07 Aligned_cols=66 Identities=44% Similarity=0.564 Sum_probs=48.2
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|.+.....+.++.++|..+..+.+....|+.+|..+..+.+.+..++.. .+.+++.+.|+.+.+.
T Consensus 120 ~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~----~gi~v~~v~Pg~~~t~ 185 (275)
T PRK08263 120 LPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAE----FGIKVTLVEPGGYSTD 185 (275)
T ss_pred HHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhh----hCcEEEEEecCCccCC
Confidence 44454555678888888888888888888999998888877777666543 3677888888766543
No 211
>PRK08278 short chain dehydrogenase; Provisional
Probab=41.75 E-value=54 Score=28.91 Aligned_cols=63 Identities=22% Similarity=0.364 Sum_probs=46.0
Q ss_pred hcchhhHhhcCceEeeccccccccCC--CCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCc
Q psy5270 127 TFLPDMMEKNRGHIVGISSMAGIVGL--PNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPF 193 (352)
Q Consensus 127 ~~~p~~~~~~~g~i~~iss~~~l~~l--p~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~ 193 (352)
...|.+..+..+.++.+++..+.... +....|+.+|.++..+...+..++.. .+++++.+.|+
T Consensus 131 ~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~----~~I~v~~i~Pg 195 (273)
T PRK08278 131 ACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRD----DGIAVNALWPR 195 (273)
T ss_pred HHHHHHHhcCCCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhhh----cCcEEEEEeCC
Confidence 33455655556788888776655544 66678999999999998888877754 36788888886
No 212
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=41.03 E-value=65 Score=27.71 Aligned_cols=67 Identities=27% Similarity=0.348 Sum_probs=48.8
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.+.....+.++.+++..+..+.+....|..+|..+..+...+..++.. .+.+++.+.|+.+.++.
T Consensus 119 ~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~i~pg~v~t~~ 185 (252)
T PRK08220 119 MPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAP----YGVRCNVVSPGSTDTDM 185 (252)
T ss_pred HHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhhH----hCeEEEEEecCcCcchh
Confidence 44555555678888888777666677788999999888888877776653 36788888888775543
No 213
>PRK06128 oxidoreductase; Provisional
Probab=40.98 E-value=39 Score=30.37 Aligned_cols=58 Identities=26% Similarity=0.352 Sum_probs=46.7
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.++.++|..+..+.+....|..+|.++.++.+.+..++.. .+++++.+.|+.+.++
T Consensus 184 ~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~----~gI~v~~v~PG~i~t~ 241 (300)
T PRK06128 184 GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAE----KGIRVNAVAPGPVWTP 241 (300)
T ss_pred CCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhhh----cCcEEEEEEECcCcCC
Confidence 468888888888877788888999999999998888776643 3788888889877654
No 214
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=40.32 E-value=40 Score=29.49 Aligned_cols=64 Identities=27% Similarity=0.234 Sum_probs=45.1
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.|.. .+.|+.+++. +..+.|....|+.+|.++.++.+.+..++.. .+++++.+.|+.+.+.
T Consensus 131 ~~~~m~~--~g~Iv~is~~-~~~~~~~~~~Y~asKaal~~l~~~la~el~~----~gIrvn~v~PG~v~T~ 194 (256)
T PRK07889 131 LLPLMNE--GGSIVGLDFD-ATVAWPAYDWMGVAKAALESTNRYLARDLGP----RGIRVNLVAAGPIRTL 194 (256)
T ss_pred HHHhccc--CceEEEEeec-ccccCCccchhHHHHHHHHHHHHHHHHHhhh----cCeEEEeeccCcccCh
Confidence 3455542 4677776543 2233455556789999999999998888754 3789999999988764
No 215
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=39.49 E-value=58 Score=27.99 Aligned_cols=65 Identities=31% Similarity=0.268 Sum_probs=47.3
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
.+.+.....+.++.+++.....+.+....|..+|..+..+...+..++.. .+.+++.+.|+.+..
T Consensus 125 ~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~----~~i~v~~i~pg~v~t 189 (250)
T PRK08063 125 AKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAP----KGIAVNAVSGGAVDT 189 (250)
T ss_pred HHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHhH----hCeEEEeEecCcccC
Confidence 45555555678888888777666777778889999988888777665533 367888888876644
No 216
>PRK12743 oxidoreductase; Provisional
Probab=37.64 E-value=62 Score=28.11 Aligned_cols=66 Identities=32% Similarity=0.436 Sum_probs=48.1
Q ss_pred chhhHhh-cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEK-NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~-~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+... ..+.++.+++..+..+.+....|..+|..+..+...+..++.. .+.+++.+.|+.+.+.
T Consensus 123 ~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~----~~i~v~~v~Pg~~~t~ 189 (256)
T PRK12743 123 ARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVE----HGILVNAVAPGAIATP 189 (256)
T ss_pred HHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHHHHhhh----hCeEEEEEEeCCccCc
Confidence 3444333 2478888888777777777788999999888888877766643 3688889999877654
No 217
>PRK06483 dihydromonapterin reductase; Provisional
Probab=37.18 E-value=53 Score=28.02 Aligned_cols=63 Identities=22% Similarity=0.268 Sum_probs=46.3
Q ss_pred chhhHhhc--CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 129 LPDMMEKN--RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 129 ~p~~~~~~--~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
.|.+.... .+.++.+++..+..+.+....|..+|.++.++.+.+..++.. +.+++.+.|+.+.
T Consensus 117 ~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~-----~irvn~v~Pg~~~ 181 (236)
T PRK06483 117 EDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAP-----EVKVNSIAPALIL 181 (236)
T ss_pred HHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHCC-----CcEEEEEccCcee
Confidence 34444333 467888887777666777788999999999998888776532 4788899998764
No 218
>KOG4341|consensus
Probab=36.39 E-value=19 Score=34.09 Aligned_cols=63 Identities=24% Similarity=0.289 Sum_probs=38.4
Q ss_pred CCCCCCcEEEccCCCCC-c--c---ccccCCCCCCCEEEccCCCCCCCCCCCccccCccCcEEEccCCc
Q psy5270 45 SSLPKLRILNLGMNRLS-S--L---PRGFGAFPVLEVLDLTYNNLNEQSLPGNFFMLETLRALYLGDND 107 (352)
Q Consensus 45 ~~L~~L~~L~L~~N~l~-~--i---p~~~~~l~~L~~L~Ls~N~l~g~~~p~~~~~l~~L~~L~l~~N~ 107 (352)
.+++.||++.++++.+. . | -..-..+..|+++.|++........-+.+..+++|+.+++-+.+
T Consensus 369 ~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 369 RNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred cCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 35677888888876443 1 1 22234566788888888876432223344556677777776654
No 219
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=36.24 E-value=66 Score=27.58 Aligned_cols=67 Identities=25% Similarity=0.450 Sum_probs=47.3
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.+.....+.++.+++..+..+.+....|..+|..+..+...+..++. ..+.+++.+.|+.+.++.
T Consensus 124 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~----~~gi~v~~i~pg~~~t~~ 190 (246)
T PRK12938 124 IDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA----TKGVTVNTVSPGYIGTDM 190 (246)
T ss_pred HHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHHHhh----hhCeEEEEEEecccCCch
Confidence 4445444557888888877766667777888888888887777666553 346788888888776543
No 220
>KOG1209|consensus
Probab=35.61 E-value=19 Score=30.90 Aligned_cols=65 Identities=29% Similarity=0.390 Sum_probs=49.3
Q ss_pred hhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 131 DMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 131 ~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
+++..-.|.|+++.|..+..+.|.-..|..+++++..+.+.+..++.. -+.++...+++.+.+..
T Consensus 125 h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~P----Fgv~Vin~itGGv~T~I 189 (289)
T KOG1209|consen 125 HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELKP----FGVRVINAITGGVATDI 189 (289)
T ss_pred HHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeeec----cccEEEEecccceeccc
Confidence 445567899999999999999999999999999988877666554433 26677777777665543
No 221
>PRK07102 short chain dehydrogenase; Provisional
Probab=34.98 E-value=75 Score=27.22 Aligned_cols=66 Identities=29% Similarity=0.362 Sum_probs=47.7
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|.+.....+.++.+++..+..+.+....|..+|..+.++...+..++. -.+.++..+.|+.+.++
T Consensus 119 ~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~----~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 119 ANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLF----KSGVHVLTVKPGFVRTP 184 (243)
T ss_pred HHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHhh----ccCcEEEEEecCcccCh
Confidence 3445455567888888877776777777899999988888777765553 34678888888877654
No 222
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=34.79 E-value=77 Score=27.03 Aligned_cols=65 Identities=32% Similarity=0.414 Sum_probs=47.2
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
.+.+.....+.++.+++..+..+.+....|..+|.++..+.+.+..++.. .+..++.+.|+.+.+
T Consensus 123 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~----~~i~v~~v~pg~~~t 187 (245)
T PRK12824 123 FAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGAR----YGITVNCIAPGYIAT 187 (245)
T ss_pred HHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHHHH----hCeEEEEEEEcccCC
Confidence 44444445678888888877777777788999999888888887766543 356777777876654
No 223
>KOG3763|consensus
Probab=34.43 E-value=19 Score=35.15 Aligned_cols=61 Identities=31% Similarity=0.350 Sum_probs=30.5
Q ss_pred CCCCCEEEccCCcCccc---ccccCCCCCCcEEEccCC--CCCcccc--ccCCCCCCCEEEccCCCCCC
Q psy5270 24 LVNLEILTLFNNQIETL---PTSLSSLPKLRILNLGMN--RLSSLPR--GFGAFPVLEVLDLTYNNLNE 85 (352)
Q Consensus 24 l~~L~~L~L~~N~l~~i---p~~l~~L~~L~~L~L~~N--~l~~ip~--~~~~l~~L~~L~Ls~N~l~g 85 (352)
.+.+..+.|++|++..+ ..--..-++|..|+|++| .+..-++ .++.+ .|+.|-+.+|.+..
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l-~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGL-PLEELVLEGNPLCT 284 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCC-CHHHeeecCCcccc
Confidence 34455666667766533 222223456777777776 3321111 12222 36666677776643
No 224
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=34.12 E-value=82 Score=27.55 Aligned_cols=55 Identities=24% Similarity=0.237 Sum_probs=43.0
Q ss_pred ceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 138 GHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 138 g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
+.++.+++..+....+....|+.+|.++.++.+.+..++.. .+++++.+.|+++.
T Consensus 153 ~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~----~gi~v~~v~PG~~~ 207 (267)
T TIGR02685 153 LSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAP----LQIRVNGVAPGLSL 207 (267)
T ss_pred eEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhh----hCeEEEEEecCCcc
Confidence 56777777666666777788999999999999888877754 36889999998653
No 225
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=33.50 E-value=97 Score=26.38 Aligned_cols=65 Identities=29% Similarity=0.597 Sum_probs=46.7
Q ss_pred hhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 130 PDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 130 p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
+.+.....+.++.++|..+..+.+....|..++.++.++.+.+..++.. .+.+++.+.|+++.+.
T Consensus 124 ~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~----~~i~v~~i~pg~~~t~ 188 (245)
T PRK12936 124 HPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIAT----RNVTVNCVAPGFIESA 188 (245)
T ss_pred HHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhhH----hCeEEEEEEECcCcCc
Confidence 3343445578888888777777787788999998888887777666533 3678888888866543
No 226
>PRK07069 short chain dehydrogenase; Validated
Probab=32.15 E-value=78 Score=27.17 Aligned_cols=70 Identities=31% Similarity=0.447 Sum_probs=49.9
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+.....+.++.+++..+..+.+....|..+|..+..+.+.+..++... ..+.+++.+.|+++.++.
T Consensus 121 ~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~--~~~i~v~~v~pg~v~t~~ 190 (251)
T PRK07069 121 ALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARR--GLDVRCNSIHPTFIRTGI 190 (251)
T ss_pred HHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHHHHHhccc--CCcEEEEEEeecccCCcc
Confidence 3455555556788888888888777888889999998888888877665432 123677778887765543
No 227
>PRK07454 short chain dehydrogenase; Provisional
Probab=31.70 E-value=92 Score=26.61 Aligned_cols=66 Identities=35% Similarity=0.486 Sum_probs=47.3
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|..+|..+.++...+..++.. .+.+++.+.|+.+.+.
T Consensus 126 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~----~gi~v~~i~pg~i~t~ 191 (241)
T PRK07454 126 LPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERS----HGIRVCTITLGAVNTP 191 (241)
T ss_pred HHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHHhhh----hCCEEEEEecCcccCC
Confidence 34444444578888888877777777778888898888887777666543 2678888888877554
No 228
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=31.56 E-value=55 Score=28.23 Aligned_cols=44 Identities=20% Similarity=0.015 Sum_probs=31.7
Q ss_pred CCCccccccchhhhhhhhHHhH-HHHHHHHhcCCceeecccCcccccCC
Q psy5270 152 LPNLVPYCASKFAVRGLMEALA-EELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 152 lp~l~~~~~s~~~l~~~~~~l~-~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+....|+.+|.++.++...+. .++. -.+.+++.+.|+.+.+..
T Consensus 131 ~~~~~~Y~~sK~a~~~~~~~la~~e~~----~~girvn~v~PG~v~T~~ 175 (241)
T PRK12428 131 VALATGYQLSKEALILWTMRQAQPWFG----ARGIRVNCVAPGPVFTPI 175 (241)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHhhh----ccCeEEEEeecCCccCcc
Confidence 3445678888988888777776 5543 347899999998876653
No 229
>PRK08267 short chain dehydrogenase; Provisional
Probab=30.13 E-value=72 Score=27.68 Aligned_cols=66 Identities=41% Similarity=0.656 Sum_probs=46.8
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|..++..+..+...+..++. -.+.+++.+.|+++.+.
T Consensus 120 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~----~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 120 LPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWR----RHGIRVADVMPLFVDTA 185 (260)
T ss_pred HHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHhc----ccCcEEEEEecCCcCCc
Confidence 3444444567888888877777777777888899888887777665543 33678888888776543
No 230
>PRK07677 short chain dehydrogenase; Provisional
Probab=29.81 E-value=72 Score=27.57 Aligned_cols=66 Identities=21% Similarity=0.245 Sum_probs=48.4
Q ss_pred cchhhHhh-cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 128 FLPDMMEK-NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 128 ~~p~~~~~-~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
..+.|... ..+.++.++|..+....+....|+.+|.++.++.+.++.++.. ..+.+++.+.|+.+.
T Consensus 120 ~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~---~~gi~v~~v~PG~v~ 186 (252)
T PRK07677 120 VGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGR---KYGIRVNAIAPGPIE 186 (252)
T ss_pred HHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHHHhCc---ccCeEEEEEeecccc
Confidence 34555443 3578998888877766677778999999999998888776532 236788888888765
No 231
>PRK08643 acetoin reductase; Validated
Probab=29.51 E-value=91 Score=26.91 Aligned_cols=59 Identities=39% Similarity=0.629 Sum_probs=45.2
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.++.++|..+..+.+....|+.+|..+..+.+.+..++.. .+.+++.+.|+.+.++.
T Consensus 131 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 131 GGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLAS----EGITVNAYAPGIVKTPM 189 (256)
T ss_pred CCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHHHhcc----cCcEEEEEeeCCCcChh
Confidence 467888888777777777788999999888888877766532 46888888898776543
No 232
>PRK06198 short chain dehydrogenase; Provisional
Probab=28.94 E-value=1e+02 Score=26.64 Aligned_cols=66 Identities=32% Similarity=0.374 Sum_probs=46.4
Q ss_pred chhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.... .+.++.+++..+..+.+....|..+|..+.++...+..++. ..+.+++++.|+++.+.
T Consensus 127 ~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~----~~~i~v~~i~pg~~~t~ 193 (260)
T PRK06198 127 IKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALL----RNRIRVNGLNIGWMATE 193 (260)
T ss_pred HHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHHHHhc----ccCeEEEEEeeccccCc
Confidence 34443332 46788888887777777777899999988888877765543 33578888888776543
No 233
>PRK05693 short chain dehydrogenase; Provisional
Probab=28.75 E-value=1.1e+02 Score=26.78 Aligned_cols=66 Identities=32% Similarity=0.493 Sum_probs=47.6
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+. ...+.++.+++..+..+.+....|+.+|..+..+.+.+..++.. .+.+++.+.|+.+.+..
T Consensus 115 ~~~~~-~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~----~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 115 FPLLR-RSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAP----FGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHh-hcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhhh----hCeEEEEEecCcccccc
Confidence 34443 23477888888777777777778999999888887777666543 37888888898776643
No 234
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=28.71 E-value=1e+02 Score=26.71 Aligned_cols=65 Identities=35% Similarity=0.439 Sum_probs=45.7
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+.....+.++.++|..... +....|..+|.++..+.+.+..++.. .+.+++.+.|+.+.++
T Consensus 127 ~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 127 VLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKGGVNALTASLAFEYAE----HGIRVNAVAPGGTEAP 191 (260)
T ss_pred HHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHHHHHHHHHHHHHHhcc----cCcEEEEEecCccCCc
Confidence 35556555567888888765532 23457899999999988888766643 3678888889877654
No 235
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=28.57 E-value=39 Score=17.77 Aligned_cols=11 Identities=36% Similarity=0.229 Sum_probs=5.3
Q ss_pred CCCCEEEccCC
Q psy5270 25 VNLEILTLFNN 35 (352)
Q Consensus 25 ~~L~~L~L~~N 35 (352)
++|++|+|+++
T Consensus 2 ~~L~~L~l~~C 12 (26)
T smart00367 2 PNLRELDLSGC 12 (26)
T ss_pred CCCCEeCCCCC
Confidence 34455555544
No 236
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=28.28 E-value=1e+02 Score=26.71 Aligned_cols=58 Identities=34% Similarity=0.428 Sum_probs=44.4
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.++.++|..+..+.+....|..+|..+.++.+.+..++.. .+.+++.+.|+.+.++
T Consensus 132 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~pg~v~t~ 189 (257)
T PRK07067 132 GGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIR----HGINVNAIAPGVVDTP 189 (257)
T ss_pred CcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhcc----cCeEEEEEeeCcccch
Confidence 367888888777777777788999999988888877766643 3678888888877554
No 237
>PRK09291 short chain dehydrogenase; Provisional
Probab=28.27 E-value=1.2e+02 Score=26.15 Aligned_cols=65 Identities=34% Similarity=0.473 Sum_probs=44.4
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
.+.+.....+.++.+++..+..+.+....|..+|..+..+...+..++. -.+.+++.+.|+++.+
T Consensus 116 ~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~----~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 116 VRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELK----PFGIQVATVNPGPYLT 180 (257)
T ss_pred HHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHHHH----hcCcEEEEEecCcccc
Confidence 4444444557888888877766667777888889888777766554443 3467777777876543
No 238
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=28.26 E-value=78 Score=27.23 Aligned_cols=55 Identities=45% Similarity=0.582 Sum_probs=43.2
Q ss_pred eEeeccccccccCCCC-ccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 139 HIVGISSMAGIVGLPN-LVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 139 ~i~~iss~~~l~~lp~-l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|+.++|..+. ..+. ...|+.+|.++.++...+..++... +++++.+.|+.+.+.
T Consensus 137 ~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~----gi~v~~v~PG~~~t~ 192 (251)
T COG1028 137 RIVNISSVAGL-GGPPGQAAYAASKAALIGLTKALALELAPR----GIRVNAVAPGYIDTP 192 (251)
T ss_pred eEEEECCchhc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEeccCCCc
Confidence 88999988887 6666 4899999999999988887555433 588889999866543
No 239
>PRK08226 short chain dehydrogenase; Provisional
Probab=28.22 E-value=84 Score=27.27 Aligned_cols=66 Identities=38% Similarity=0.568 Sum_probs=44.8
Q ss_pred chhhHhhcCceEeecccccc-ccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAG-IVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~-l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+ ....+....|+.+|..+..+.+.+..++.. .+.+++.+.|+.+.++
T Consensus 125 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~----~~i~v~~i~pg~v~t~ 191 (263)
T PRK08226 125 LPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQ----SGIRVNAICPGYVRTP 191 (263)
T ss_pred HHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHHhcc----cCcEEEEEecCcccCH
Confidence 34444444567887776554 344566678899999888888777766542 3678888888876554
No 240
>KOG4231|consensus
Probab=27.82 E-value=20 Score=34.61 Aligned_cols=61 Identities=34% Similarity=0.421 Sum_probs=44.2
Q ss_pred hhhhhccccccccCCCchhhhhHHhHhhhCCCCcceecchhhhcccccccccCCceeeecccc
Q psy5270 230 TILDLTYNNLNEQSLPGNFFMLETLRALYLGDNDFEVLPAEIGNLKNLQIMLEPRWVISMGSC 292 (352)
Q Consensus 230 ~~L~ls~N~l~g~~iP~~~~~l~~L~~L~Ls~N~l~~iP~~l~~l~~L~~l~~~~~~~~~~~~ 292 (352)
+.+.+|.+-| + ..|..+..|..++.+.+.+|+++..|..++++.++.++...+.+.....|
T Consensus 107 t~~s~s~~~~-~-~~~~~vt~l~~~~~~~~~~~k~s~~~~li~k~~~~~i~r~~s~~d~l~~~ 167 (763)
T KOG4231|consen 107 TSLSLSGCGL-L-VMPVEVTELPLLEKLCLEHNKLSVLPPLIGKLKNLKILRVDSVPDELRQC 167 (763)
T ss_pred eeccccccee-c-cChHHHHhhhhhhHHHHHHhhhccchhhhhhhhhHHHhccCCcccccccc
Confidence 4567777777 3 57888888888888888888888888888888877766444444443333
No 241
>PRK06914 short chain dehydrogenase; Provisional
Probab=27.67 E-value=1.4e+02 Score=26.25 Aligned_cols=66 Identities=41% Similarity=0.641 Sum_probs=45.6
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|.+.....+.++.+++..+..+.+....|..++..+.++...+..++.. .+.+++.+.|+.+.++
T Consensus 124 ~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~----~~i~v~~v~pg~~~t~ 189 (280)
T PRK06914 124 LPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKP----FGIDVALIEPGSYNTN 189 (280)
T ss_pred HHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHHHHhhh----hCCEEEEEecCCcccc
Confidence 34444445577888887777767777778888888888777766655432 3678888888766554
No 242
>PRK06101 short chain dehydrogenase; Provisional
Probab=27.65 E-value=1.2e+02 Score=25.91 Aligned_cols=59 Identities=34% Similarity=0.422 Sum_probs=44.7
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.++.++|..+..+.+....|..+|..+.++.+.+..++.. .+.+++.+.|+.+.++.
T Consensus 120 ~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~----~gi~v~~v~pg~i~t~~ 178 (240)
T PRK06101 120 GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRP----KGIEVVTVFPGFVATPL 178 (240)
T ss_pred CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHHh----cCceEEEEeCCcCCCCC
Confidence 356777888777777788888999999999888877766643 36778888888776543
No 243
>PRK09072 short chain dehydrogenase; Provisional
Probab=27.60 E-value=81 Score=27.45 Aligned_cols=66 Identities=35% Similarity=0.610 Sum_probs=46.3
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|..+|.++.++.+.+..++.. .+.++..+.|+.+.+.
T Consensus 123 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~----~~i~v~~v~Pg~~~t~ 188 (263)
T PRK09072 123 LPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELAD----TGVRVLYLAPRATRTA 188 (263)
T ss_pred HHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHhcc----cCcEEEEEecCccccc
Confidence 44454455578888887777666777778888998888887777666532 3577778888766543
No 244
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=27.57 E-value=1.2e+02 Score=25.95 Aligned_cols=66 Identities=42% Similarity=0.548 Sum_probs=46.7
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|..++..+..+...+..++.. .+.+++.+.|+.+.+.
T Consensus 125 ~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~----~~i~v~~i~pg~~~t~ 190 (251)
T PRK07231 125 VPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGP----DKIRVNAVAPVVVETG 190 (251)
T ss_pred HHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhh----hCeEEEEEEECccCCC
Confidence 44444445577888888888777777778888888877777666655432 3678888888877554
No 245
>PRK08628 short chain dehydrogenase; Provisional
Probab=27.23 E-value=99 Score=26.73 Aligned_cols=58 Identities=31% Similarity=0.357 Sum_probs=44.9
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.++.+++..+..+.+....|..+|..+.++.+.+..++.. .+.+++.+.|+.+.++
T Consensus 132 ~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~----~~i~v~~v~pg~v~t~ 189 (258)
T PRK08628 132 RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAK----DGVRVNAVIPAEVMTP 189 (258)
T ss_pred CcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHHhh----cCeEEEEEecCccCCH
Confidence 467888888877777777888999999998888887766543 3678888888876553
No 246
>PRK06194 hypothetical protein; Provisional
Probab=26.99 E-value=1.4e+02 Score=26.28 Aligned_cols=72 Identities=35% Similarity=0.563 Sum_probs=49.4
Q ss_pred HHhcchhhHhhcC------ceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 125 LETFLPDMMEKNR------GHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 125 ~l~~~p~~~~~~~------g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.....|.+..... +.++.++|..+..+.+....|..+|..+..+...+..++.. .....+++.+.|+.+.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~--~~~~irv~~v~pg~i~t~ 199 (287)
T PRK06194 122 VRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSL--VTDQVGASVLCPYFVPTG 199 (287)
T ss_pred HHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEEEeCcccCc
Confidence 3334555655443 68888888888877788888999999988888877766542 123456666777766554
No 247
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=26.75 E-value=1.1e+02 Score=25.88 Aligned_cols=70 Identities=24% Similarity=0.285 Sum_probs=45.6
Q ss_pred cchhhHhhcCceEeeccccccc---cCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGI---VGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l---~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
..|.+.....+.+..+++..+. ...+....|+.+|.++.++.+.+..++... ..+.+++.+.|+.+.+..
T Consensus 115 ~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~--~~~i~v~~v~PG~v~t~~ 187 (235)
T PRK09009 115 FTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRS--LKHGVVLALHPGTTDTAL 187 (235)
T ss_pred HHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcc--cCCeEEEEEcccceecCC
Confidence 3455544444566666543221 124556689999999999988888776431 236788899999886654
No 248
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=26.54 E-value=51 Score=26.24 Aligned_cols=42 Identities=52% Similarity=0.798 Sum_probs=37.5
Q ss_pred hcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHH
Q psy5270 135 KNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEEL 176 (352)
Q Consensus 135 ~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l 176 (352)
+..+.++.++|..+..+.|....|..+|.++.++.+.+..++
T Consensus 125 ~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 125 QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEecchhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 558899999999999999999999999999999998887765
No 249
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=26.45 E-value=1.3e+02 Score=25.48 Aligned_cols=66 Identities=30% Similarity=0.407 Sum_probs=45.8
Q ss_pred cchhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 128 FLPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 128 ~~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
..|.+.....+.++.+++..+..+.+....|+.+|..+..+.+.+..++. ..+..++.+.|+++.+
T Consensus 120 ~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~----~~~i~v~~i~pg~~~t 185 (242)
T TIGR01829 120 VIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGA----TKGVTVNTISPGYIAT 185 (242)
T ss_pred HHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhh----hhCeEEEEEeeCCCcC
Confidence 34445445557888888877777777777888888888777776665543 2467777777876654
No 250
>PRK07856 short chain dehydrogenase; Provisional
Probab=26.12 E-value=1e+02 Score=26.62 Aligned_cols=65 Identities=28% Similarity=0.339 Sum_probs=47.5
Q ss_pred chhhHhh-cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEK-NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~-~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+..+ ..+.++.+++..+..+.+....|+.+|..+..+.+.+..++.. .++++.+.|+.+.+.
T Consensus 118 ~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-----~i~v~~i~Pg~v~t~ 183 (252)
T PRK07856 118 NAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP-----KVRVNAVVVGLVRTE 183 (252)
T ss_pred HHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcC-----CeEEEEEEeccccCh
Confidence 3444433 3478888998888888888889999999998888877766532 277888888876554
No 251
>PRK06940 short chain dehydrogenase; Provisional
Probab=26.03 E-value=99 Score=27.31 Aligned_cols=41 Identities=29% Similarity=0.186 Sum_probs=31.5
Q ss_pred ccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 155 LVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 155 l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
...|..+|.++..+...++.++.. .+++++.+.|+++.+..
T Consensus 166 ~~~Y~asKaa~~~~~~~la~e~~~----~gIrvn~i~PG~v~T~~ 206 (275)
T PRK06940 166 LHAYQIAKRANALRVMAEAVKWGE----RGARINSISPGIISTPL 206 (275)
T ss_pred cchhHHHHHHHHHHHHHHHHHHcc----CCeEEEEeccCcCcCcc
Confidence 456889999988888877766543 47899999999887653
No 252
>PRK12939 short chain dehydrogenase; Provisional
Probab=25.91 E-value=1.3e+02 Score=25.76 Aligned_cols=66 Identities=38% Similarity=0.530 Sum_probs=46.0
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|..+|.....+...+..++.. .+..+..+.|+.+.+.
T Consensus 127 ~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~~----~~i~v~~v~pg~v~t~ 192 (250)
T PRK12939 127 LPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGG----RGITVNAIAPGLTATE 192 (250)
T ss_pred HHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhh----hCEEEEEEEECCCCCc
Confidence 44454545678888888777766777777888898888877776655532 3577777778766543
No 253
>PRK07023 short chain dehydrogenase; Provisional
Probab=25.75 E-value=86 Score=26.86 Aligned_cols=65 Identities=29% Similarity=0.347 Sum_probs=46.4
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|..+|..+.++...+..+ ...+.++..+.|+++.++
T Consensus 121 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-----~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 121 AQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-----ANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhc-----CCCCcEEEEecCCccccH
Confidence 34444445678999888887777777778888888888777766544 234678888888877554
No 254
>PRK06949 short chain dehydrogenase; Provisional
Probab=25.60 E-value=1.5e+02 Score=25.52 Aligned_cols=58 Identities=38% Similarity=0.532 Sum_probs=42.3
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.++.+++..+....+....|+.+|.....+...+..++.. .+.+++.+.|+++.++
T Consensus 145 ~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~----~~i~v~~v~pG~v~t~ 202 (258)
T PRK06949 145 GGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGR----HGINVNAICPGYIDTE 202 (258)
T ss_pred CeEEEEECcccccCCCCCccHHHHHHHHHHHHHHHHHHHHHh----cCeEEEEEeeCCCcCC
Confidence 367787887777766677777888888888887777666543 3678888888877654
No 255
>PRK06924 short chain dehydrogenase; Provisional
Probab=25.43 E-value=1.2e+02 Score=25.92 Aligned_cols=69 Identities=23% Similarity=0.301 Sum_probs=48.5
Q ss_pred cchhhHhh-cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 128 FLPDMMEK-NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 128 ~~p~~~~~-~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
..|.+... ..+.++.++|..+....+....|..+|.++..+.+.++.+... ...+.++..+.|+.+.++
T Consensus 123 ~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~--~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 123 FMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEE--EEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred HHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhh--cCCCeEEEEecCCccccH
Confidence 34444442 2467888888777777777888999999999888887765531 123578888888877554
No 256
>PRK12742 oxidoreductase; Provisional
Probab=24.84 E-value=1.6e+02 Score=24.92 Aligned_cols=58 Identities=29% Similarity=0.457 Sum_probs=42.6
Q ss_pred CceEeecccccc-ccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAG-IVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~-l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.++.+++..+ ....+....|+.+|..+..+...+..++.. .+.+++.+.|+.+.+.
T Consensus 124 ~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~----~gi~v~~v~Pg~~~t~ 182 (237)
T PRK12742 124 GGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGP----RGITINVVQPGPIDTD 182 (237)
T ss_pred CCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHhh----hCeEEEEEecCcccCC
Confidence 467887777655 345567788999999998888777766543 3688888889877654
No 257
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=24.68 E-value=1.5e+02 Score=25.28 Aligned_cols=65 Identities=34% Similarity=0.514 Sum_probs=45.5
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
.|.+.....+.++.++|..+..+.+....|..+|.++..+...+..++.. .+.++..+.|+.+.+
T Consensus 127 ~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~----~~i~v~~v~pg~v~t 191 (247)
T PRK12935 127 LPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAK----TNVTVNAICPGFIDT 191 (247)
T ss_pred HHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHH----cCcEEEEEEeCCCcC
Confidence 34444445578888888777666677788999999888887777666532 356777777776543
No 258
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=24.35 E-value=1.9e+02 Score=24.96 Aligned_cols=62 Identities=32% Similarity=0.382 Sum_probs=43.5
Q ss_pred chhhHhhc-CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcc
Q psy5270 129 LPDMMEKN-RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFM 194 (352)
Q Consensus 129 ~p~~~~~~-~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~ 194 (352)
.+.+.... .+.++.+++..+..+.+....|+.+|.++.++.+.+..++.. .+.+++.+.|+.
T Consensus 124 ~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~----~gi~v~~v~pg~ 186 (259)
T PRK12384 124 SRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAE----YGITVHSLMLGN 186 (259)
T ss_pred HHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHHHHHHHH----cCcEEEEEecCC
Confidence 44444443 568888877666555566678999999998888888777654 367777777764
No 259
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=24.20 E-value=1.4e+02 Score=25.33 Aligned_cols=66 Identities=44% Similarity=0.666 Sum_probs=46.3
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.+.....+.++.+++..+..+.+....|..+|..+..+...+..++.. .+.+++.+.|+.+.+.
T Consensus 127 ~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~----~gi~v~~v~pg~v~t~ 192 (239)
T PRK07666 127 LPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRK----HNIRVTALTPSTVATD 192 (239)
T ss_pred HHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhc----cCcEEEEEecCcccCc
Confidence 34444445577888888777777777777888888887777776666533 3678888888766544
No 260
>PRK06057 short chain dehydrogenase; Provisional
Probab=23.98 E-value=1.8e+02 Score=25.07 Aligned_cols=67 Identities=27% Similarity=0.468 Sum_probs=44.5
Q ss_pred chhhHhhcCceEeeccccccccCC-CCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGL-PNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~l-p~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.|.+.....+.++.+++..+..+. +....|..+|.++..+.+.+..++.. .+.+++.+.|+.+.++.
T Consensus 124 ~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~----~gi~v~~i~pg~v~t~~ 191 (255)
T PRK06057 124 LPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFAR----QGIRVNALCPGPVNTPL 191 (255)
T ss_pred HHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHh----hCcEEEEEeeCCcCCch
Confidence 455555556788888776554443 35667888898888777776665543 26778888888775543
No 261
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=22.99 E-value=1.1e+02 Score=26.22 Aligned_cols=64 Identities=36% Similarity=0.482 Sum_probs=44.7
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
.|.+.....+.++.+++..+..+.+....|..+|..+..+...+..++. -.+.+++.+.|+.+.
T Consensus 118 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~----~~~i~v~~v~pg~i~ 181 (248)
T PRK10538 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH----GTAVRVTDIEPGLVG 181 (248)
T ss_pred HHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhc----CCCcEEEEEeCCeec
Confidence 4445445557888888877766667777888888888777666655542 346788888888764
No 262
>PRK05875 short chain dehydrogenase; Provisional
Probab=22.84 E-value=1.4e+02 Score=26.20 Aligned_cols=65 Identities=32% Similarity=0.364 Sum_probs=45.1
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
.+.+.....+.++.+++.....+.+....|..+|..+..+...+..++ ...+.+++.+.|+.+.+
T Consensus 130 ~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~----~~~~i~v~~i~Pg~v~t 194 (276)
T PRK05875 130 ARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADEL----GPSWVRVNSIRPGLIRT 194 (276)
T ss_pred HHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHh----cccCeEEEEEecCccCC
Confidence 455555556788888887776666667788889988887776665444 33467788888876644
No 263
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=22.69 E-value=2.1e+02 Score=24.35 Aligned_cols=59 Identities=37% Similarity=0.527 Sum_probs=41.8
Q ss_pred CceEeeccccccccCCCC-ccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccCC
Q psy5270 137 RGHIVGISSMAGIVGLPN-LVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTGL 199 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~-l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~~ 199 (352)
.+.++.+++..+..+.+. ...|..+|..+.++...+..++.. .+.+++.+.|+++.++.
T Consensus 135 ~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~----~~i~v~~i~Pg~v~t~~ 194 (248)
T PRK06947 135 GGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGP----HGVRVNAVRPGLIETEI 194 (248)
T ss_pred CcEEEEECchhhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhh----hCcEEEEEeccCccccc
Confidence 356887777666554443 457999999888888877766542 36788889998876653
No 264
>PRK06701 short chain dehydrogenase; Provisional
Probab=22.30 E-value=1.7e+02 Score=26.01 Aligned_cols=58 Identities=26% Similarity=0.366 Sum_probs=44.9
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.+.++.+++..+..+.+....|..+|.++..+...+..++.. .+.+++.+.|+.+.+.
T Consensus 174 ~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~----~gIrv~~i~pG~v~T~ 231 (290)
T PRK06701 174 GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQ----KGIRVNAVAPGPIWTP 231 (290)
T ss_pred CCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhh----cCeEEEEEecCCCCCc
Confidence 367888888887777777788999999998888887766643 3678888888876554
No 265
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=21.64 E-value=1.7e+02 Score=26.24 Aligned_cols=52 Identities=33% Similarity=0.405 Sum_probs=41.5
Q ss_pred ceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCc
Q psy5270 138 GHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPF 193 (352)
Q Consensus 138 g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~ 193 (352)
|.++.++|..+..+.+....|..+|.++.++...+..++.. .+++++.+.|+
T Consensus 148 g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~----~gI~vn~i~Pg 199 (306)
T PRK07792 148 GRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGR----YGVRANAICPR 199 (306)
T ss_pred cEEEEECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhhh----cCeEEEEECCC
Confidence 68888888877777777778999999999998888776643 36788888886
No 266
>PRK07576 short chain dehydrogenase; Provisional
Probab=21.21 E-value=1.4e+02 Score=26.01 Aligned_cols=55 Identities=31% Similarity=0.359 Sum_probs=42.4
Q ss_pred CceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccc
Q psy5270 137 RGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMV 195 (352)
Q Consensus 137 ~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~ 195 (352)
.+.++.+++..+..+.+....|..+|.++..+.+.+..++.. .+.+++.+.|+.+
T Consensus 136 ~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~----~gi~v~~v~pg~~ 190 (264)
T PRK07576 136 GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGP----EGIRVNSIVPGPI 190 (264)
T ss_pred CCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHhhh----cCeEEEEEecccc
Confidence 478888888777767777788999999998888877666543 4678888888755
No 267
>PRK06482 short chain dehydrogenase; Provisional
Probab=20.95 E-value=1.8e+02 Score=25.48 Aligned_cols=64 Identities=33% Similarity=0.543 Sum_probs=43.5
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccc
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVD 196 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~ 196 (352)
.|.+.....+.++.++|..+..+.|....|..+|..+..+...+..++. -.+.++..+.|+.+.
T Consensus 119 ~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~----~~gi~v~~v~pg~~~ 182 (276)
T PRK06482 119 LPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVA----PFGIEFTIVEPGPAR 182 (276)
T ss_pred HHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhh----ccCcEEEEEeCCccc
Confidence 4444444557888888877776777777888999888877776655443 235666667776543
No 268
>PRK07577 short chain dehydrogenase; Provisional
Probab=20.72 E-value=2.1e+02 Score=24.09 Aligned_cols=65 Identities=32% Similarity=0.360 Sum_probs=44.4
Q ss_pred chhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCcccccC
Q psy5270 129 LPDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDTG 198 (352)
Q Consensus 129 ~p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~~ 198 (352)
.|.+.....+.++.+++... .+.+....|..+|..+.++.+.+..++.. .+.+++.+.|+.+.++
T Consensus 111 ~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~----~gi~v~~i~pg~~~t~ 175 (234)
T PRK07577 111 LEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSALVGCTRTWALELAE----YGITVNAVAPGPIETE 175 (234)
T ss_pred HHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHHHHHHHHHHHHHHh----hCcEEEEEecCcccCc
Confidence 44454445578888877643 34455667888998888888877766543 3678888888876554
No 269
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.62 E-value=1.4e+02 Score=28.54 Aligned_cols=58 Identities=41% Similarity=0.604 Sum_probs=45.2
Q ss_pred cCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 136 NRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 136 ~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
..+.++.++|..+..+.+....|..+|..+.++...+..++.. .+..++.+.|+.+.+
T Consensus 334 ~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~~----~gi~v~~v~PG~i~t 391 (450)
T PRK08261 334 DGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAE----RGITINAVAPGFIET 391 (450)
T ss_pred CCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhh----hCcEEEEEEeCcCcc
Confidence 4478888888887777777788999999988888887776654 367888888887654
No 270
>PRK06138 short chain dehydrogenase; Provisional
Probab=20.28 E-value=1.9e+02 Score=24.69 Aligned_cols=64 Identities=30% Similarity=0.377 Sum_probs=44.5
Q ss_pred hhhHhhcCceEeeccccccccCCCCccccccchhhhhhhhHHhHHHHHHHHhcCCceeecccCccccc
Q psy5270 130 PDMMEKNRGHIVGISSMAGIVGLPNLVPYCASKFAVRGLMEALAEELREDARNSKIKFTSIFPFMVDT 197 (352)
Q Consensus 130 p~~~~~~~g~i~~iss~~~l~~lp~l~~~~~s~~~l~~~~~~l~~~l~~~~~~~~n~~~g~~P~~~~~ 197 (352)
+.+.....+.++.+++..+..+.+....|+.+|.....+.+.+..++. ..+.++..+.|+.+.+
T Consensus 125 ~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~----~~~i~v~~v~pg~~~t 188 (252)
T PRK06138 125 PIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHA----TDGIRVNAVAPGTIDT 188 (252)
T ss_pred HHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHHH----hcCeEEEEEEECCccC
Confidence 344444557888888877776667777889999888888777766553 2356777777776544
Done!