BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5271
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42026|NDUS7_BOVIN NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Bos taurus GN=NDUFS7 PE=1 SV=1
Length = 216
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 69/73 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQKK
Sbjct: 144 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK 203
Query: 101 VKRMKILQSWYRR 113
+KR K L+ WYRR
Sbjct: 204 IKREKRLRIWYRR 216
>sp|Q0MQI0|NDUS7_PANTR NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pan troglodytes GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 101 VKRMKILQSWYRR 113
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|P0CB84|NDUS7_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pongo pygmaeus GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 101 VKRMKILQSWYRR 113
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|Q0MQH9|NDUS7_GORGO NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS7 PE=2
SV=1
Length = 213
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 101 VKRMKILQSWYRR 113
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|O75251|NDUS7_HUMAN NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Homo sapiens GN=NDUFS7 PE=1 SV=3
Length = 213
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 101 VKRMKILQSWYRR 113
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|P0CB83|NDUS7_PONAB NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pongo abelii GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+K
Sbjct: 141 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
Query: 101 VKRMKILQSWYRR 113
+KR + LQ WYRR
Sbjct: 201 IKRERRLQIWYRR 213
>sp|Q9DC70|NDUS7_MOUSE NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Mus musculus GN=Ndufs7 PE=1 SV=1
Length = 224
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPR+V+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+K
Sbjct: 152 MPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRK 211
Query: 101 VKRMKILQSWYRR 113
+KR + L+ WYRR
Sbjct: 212 IKREQKLKIWYRR 224
>sp|A8XFG2|NDUS7_CAEBR Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Caenorhabditis briggsae GN=nduf-7 PE=3
SV=1
Length = 199
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 67/73 (91%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M E +WVISMGSCANGGGYYHY+YSV+RGCDR+IPVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 127 MPEAKWVISMGSCANGGGYYHYAYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKK 186
Query: 101 VKRMKILQSWYRR 113
+KR + Q WYRR
Sbjct: 187 IKRKREAQLWYRR 199
>sp|Q94360|NDUS7_CAEEL Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Caenorhabditis elegans GN=nduf-7 PE=3
SV=1
Length = 199
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 67/73 (91%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M E +WVISMGSCANGGGYYHY+YSV+RGCDR+IPVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 127 MPEAKWVISMGSCANGGGYYHYAYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKK 186
Query: 101 VKRMKILQSWYRR 113
+KR + Q WYRR
Sbjct: 187 IKRKREAQLWYRR 199
>sp|O47950|NDUS7_NEUCR NADH-ubiquinone oxidoreductase 19.3 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=G17A4.170 PE=2 SV=1
Length = 226
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 67/73 (91%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M +PRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPT+EALMYGI QLQ+K
Sbjct: 154 MPDPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALMYGIFQLQRK 213
Query: 101 VKRMKILQSWYRR 113
++ KI + WYR+
Sbjct: 214 MRNTKITRMWYRK 226
>sp|Q42577|NDUS7_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Arabidopsis thaliana GN=At5g11770 PE=1
SV=1
Length = 218
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 65/73 (89%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 146 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKK 205
Query: 101 VKRMKILQSWYRR 113
+ R K W+ +
Sbjct: 206 INRRKDFLHWWNK 218
>sp|P42027|NDUS7_BRAOL NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Brassica oleracea PE=2 SV=1
Length = 215
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 65/73 (89%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 143 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKK 202
Query: 101 VKRMKILQSWYRR 113
+ R K W+ +
Sbjct: 203 INRRKDFLHWWNK 215
>sp|Q43844|NDUS7_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Solanum tuberosum PE=2 SV=1
Length = 213
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 65/71 (91%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSY+VVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQKK
Sbjct: 141 MPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK 200
Query: 101 VKRMKILQSWY 111
+ R K L W+
Sbjct: 201 INRRKDLLMWW 211
>sp|Q54NI6|NDUS7_DICDI NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Dictyostelium discoideum GN=ndufs7 PE=3
SV=1
Length = 178
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 82/123 (66%), Gaps = 11/123 (8%)
Query: 2 VFIYRPFTASLQLTNFLTPPRIEPGSTTCKASAVTTTSWML-----------EPRWVISM 50
V + + + A + F PR P + C A T T+ M PR+V+SM
Sbjct: 56 VEMMQGYAARYDMDRFGVIPRASPRQSDCIIVAGTLTNKMAPALRKVYDQMPNPRYVVSM 115
Query: 51 GSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKILQSW 110
GSCANGGGYYHYSYSVVRGCDRIIPVD+Y+PGCPPTAEA +YGILQLQKK+ R + L +W
Sbjct: 116 GSCANGGGYYHYSYSVVRGCDRIIPVDVYIPGCPPTAEAFVYGILQLQKKIGREQNLLTW 175
Query: 111 YRR 113
+R+
Sbjct: 176 WRK 178
>sp|O21272|NDUS7_RECAM NADH-ubiquinone oxidoreductase 20 kDa subunit OS=Reclinomonas
americana GN=NAD10 PE=3 SV=1
Length = 182
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 66/73 (90%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWV+SMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQKK
Sbjct: 110 MSEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKK 169
Query: 101 VKRMKILQSWYRR 113
+KR + W ++
Sbjct: 170 IKRSRKTLYWLQK 182
>sp|Q2W3I5|NUOB_MAGSA NADH-quinone oxidoreductase subunit B OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=nuoB PE=3
SV=1
Length = 186
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/63 (92%), Positives = 62/63 (98%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPP+AEALMYGILQLQKK
Sbjct: 118 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPSAEALMYGILQLQKK 177
Query: 101 VKR 103
++R
Sbjct: 178 IRR 180
>sp|A1B497|NUOB_PARDP NADH-quinone oxidoreductase subunit B OS=Paracoccus denitrificans
(strain Pd 1222) GN=nuoB PE=1 SV=1
Length = 175
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 11/106 (10%)
Query: 13 QLTNFLTPPRIEPGSTTCKASAVTTTSWML-----------EPRWVISMGSCANGGGYYH 61
L F T PR P + A T T+ M EPR+VISMGSCANGGGYYH
Sbjct: 68 DLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYH 127
Query: 62 YSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMKIL 107
YSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ++++R L
Sbjct: 128 YSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRRIRRTGTL 173
>sp|Q2RU39|NUOB_RHORT NADH-quinone oxidoreductase subunit B OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=nuoB PE=3 SV=1
Length = 185
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPT+EAL+YG+LQLQKK
Sbjct: 117 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALLYGVLQLQKK 176
Query: 101 VKRMKIL 107
+KR L
Sbjct: 177 IKRTGAL 183
>sp|Q0BSK3|NUOB_GRABC NADH-quinone oxidoreductase subunit B OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=nuoB PE=3 SV=1
Length = 194
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 76/114 (66%), Gaps = 14/114 (12%)
Query: 1 MVFIYRPFTASLQLTNFLTPPRIEPGSTTCKASAVTTTSWML-----------EPRWVIS 49
M+ Y P L F PR P + A T T+ M EPRWVIS
Sbjct: 77 MIHAYMP---RYDLDRFGVIPRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEPRWVIS 133
Query: 50 MGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKR 103
MGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQKK++R
Sbjct: 134 MGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGIMQLQKKIRR 187
>sp|A5IHW2|NUOB_LEGPC NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Corby) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKILQS 109
++R +L++
Sbjct: 150 IRRKPVLEA 158
>sp|Q5WT21|NUOB_LEGPL NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Lens) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKILQS 109
++R +L++
Sbjct: 150 IRRKPVLEA 158
>sp|Q5ZRT9|NUOB_LEGPH NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKILQS 109
++R +L++
Sbjct: 150 IRRKPVLEA 158
>sp|Q5X1A8|NUOB_LEGPA NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Paris) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKILQS 109
++R +L++
Sbjct: 150 IRRKPVLEA 158
>sp|Q82TU4|NUOB_NITEU NADH-quinone oxidoreductase subunit B OS=Nitrosomonas europaea
(strain ATCC 19718 / NBRC 14298) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q7NZI0|NUOB1_CHRVO NADH-quinone oxidoreductase subunit B 1 OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=nuoB1 PE=3 SV=1
Length = 158
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q31HF9|NUOB_THICR NADH-quinone oxidoreductase subunit B OS=Thiomicrospira crunogena
(strain XCL-2) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q163Q1|NUOB_ROSDO NADH-quinone oxidoreductase subunit B OS=Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) GN=nuoB PE=3 SV=1
Length = 177
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 73/102 (71%), Gaps = 11/102 (10%)
Query: 13 QLTNFLTPPRIEPGSTTCKASAVTTTSWML-----------EPRWVISMGSCANGGGYYH 61
+ F T PR P + A T T+ M EPR+VISMGSCANGGGYYH
Sbjct: 70 DMERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYH 129
Query: 62 YSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKR 103
YSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K++R
Sbjct: 130 YSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIMQLQRKIRR 171
>sp|Q3SEX7|NUOB_THIDA NADH-quinone oxidoreductase subunit B OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL++GI+QLQKK
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGIIQLQKK 149
Query: 101 VKRMKIL 107
++R +
Sbjct: 150 IRRTNTI 156
>sp|Q473U2|NUOB_CUPPJ NADH-quinone oxidoreductase subunit B OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=nuoB PE=3 SV=1
Length = 160
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q1LPW2|NUOB_RALME NADH-quinone oxidoreductase subunit B OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nuoB PE=3 SV=1
Length = 160
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|B3R3W8|NUOB_CUPTR NADH-quinone oxidoreductase subunit B OS=Cupriavidus taiwanensis
(strain R1 / LMG 19424) GN=nuoB PE=3 SV=1
Length = 160
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q0KCS9|NUOB_CUPNH NADH-quinone oxidoreductase subunit B OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=nuoB PE=3 SV=1
Length = 160
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q3J829|NUOB2_NITOC NADH-quinone oxidoreductase subunit B 2 OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=nuoB2 PE=3 SV=1
Length = 158
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 61/63 (96%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MSEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKR 103
+KR
Sbjct: 150 IKR 152
>sp|B8GNY6|NUOB_THISH NADH-quinone oxidoreductase subunit B OS=Thioalkalivibrio sp.
(strain HL-EbGR7) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSY+VVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQNK 149
Query: 101 VKRMKIL 107
++R +
Sbjct: 150 IRRTNTI 156
>sp|Q5P1E9|NUOB_AROAE NADH-quinone oxidoreductase subunit B OS=Aromatoleum aromaticum
(strain EbN1) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q47HH5|NUOB_DECAR NADH-quinone oxidoreductase subunit B OS=Dechloromonas aromatica
(strain RCB) GN=nuoB PE=3 SV=1
Length = 158
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGIIQLQNK 149
Query: 101 VKRMKIL 107
++R +
Sbjct: 150 IRRTNTI 156
>sp|A1K5A9|NUOB1_AZOSB NADH-quinone oxidoreductase subunit B 1 OS=Azoarcus sp. (strain
BH72) GN=nuoB1 PE=3 SV=1
Length = 158
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|Q1GZL0|NUOB_METFK NADH-quinone oxidoreductase subunit B OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=nuoB
PE=3 SV=1
Length = 158
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSY+VVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKIL 107
+KR +
Sbjct: 150 IKRTNTI 156
>sp|A9HRU3|NUOB2_GLUDA NADH-quinone oxidoreductase subunit B 2 OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=nuoB2 PE=3 SV=1
Length = 191
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI QLQKK
Sbjct: 122 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIFQLQKK 181
Query: 101 VKR 103
++R
Sbjct: 182 IRR 184
>sp|A4G643|NUOB_HERAR NADH-quinone oxidoreductase subunit B OS=Herminiimonas
arsenicoxydans GN=nuoB PE=3 SV=1
Length = 158
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIMQLQNK 149
Query: 101 VKRMKIL 107
++R +
Sbjct: 150 IRRTNTI 156
>sp|A6SY06|NUOB_JANMA NADH-quinone oxidoreductase subunit B OS=Janthinobacterium sp.
(strain Marseille) GN=nuoB PE=3 SV=1
Length = 158
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIMQLQNK 149
Query: 101 VKRMKIL 107
++R +
Sbjct: 150 IRRTNTI 156
>sp|A1VM61|NUOB_POLNA NADH-quinone oxidoreductase subunit B OS=Polaromonas
naphthalenivorans (strain CJ2) GN=nuoB PE=3 SV=1
Length = 159
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQQK 149
Query: 101 VKRMKIL 107
++R +
Sbjct: 150 IRRTNTI 156
>sp|A1WLP3|NUOB_VEREI NADH-quinone oxidoreductase subunit B OS=Verminephrobacter eiseniae
(strain EF01-2) GN=nuoB PE=3 SV=1
Length = 159
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWV+SMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGILQLQ+K
Sbjct: 90 MSEPRWVLSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGILQLQQK 149
Query: 101 VKR 103
++R
Sbjct: 150 IRR 152
>sp|A1W4M3|NUOB_ACISJ NADH-quinone oxidoreductase subunit B OS=Acidovorax sp. (strain
JS42) GN=nuoB PE=3 SV=1
Length = 159
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQK 149
Query: 101 VKR 103
++R
Sbjct: 150 IRR 152
>sp|B9MEL5|NUOB_ACIET NADH-quinone oxidoreductase subunit B OS=Acidovorax ebreus (strain
TPSY) GN=nuoB PE=3 SV=1
Length = 159
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQK 149
Query: 101 VKR 103
++R
Sbjct: 150 IRR 152
>sp|A3PIW9|NUOB1_RHOS1 NADH-quinone oxidoreductase subunit B 1 OS=Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9) GN=nuoB1 PE=3 SV=1
Length = 176
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 72/102 (70%), Gaps = 11/102 (10%)
Query: 13 QLTNFLTPPRIEPGSTTCKASAVTTTSWML-----------EPRWVISMGSCANGGGYYH 61
+ F PR P + A T T+ M EPR+VISMGSCANGGGYYH
Sbjct: 69 DVERFGVAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYH 128
Query: 62 YSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKR 103
YSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+K++R
Sbjct: 129 YSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIRR 170
>sp|A5FX09|NUOB1_ACICJ NADH-quinone oxidoreductase subunit B 1 OS=Acidiphilium cryptum
(strain JF-5) GN=nuoB1 PE=3 SV=1
Length = 186
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 75/114 (65%), Gaps = 14/114 (12%)
Query: 1 MVFIYRPFTASLQLTNFLTPPRIEPGSTTCKASAVTTTSWML-----------EPRWVIS 49
M+ Y P L F PR P + A T T+ M EPRWVIS
Sbjct: 69 MIHAYMP---RWDLDRFGIIPRNSPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVIS 125
Query: 50 MGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKR 103
MGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI QLQKK++R
Sbjct: 126 MGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGITQLQKKIRR 179
>sp|Q2YA26|NUOB2_NITMU NADH-quinone oxidoreductase subunit B 2 OS=Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849) GN=nuoB2 PE=3 SV=1
Length = 158
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 61/67 (91%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ K
Sbjct: 90 MAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNK 149
Query: 101 VKRMKIL 107
+ R +
Sbjct: 150 IHRTNTI 156
>sp|A1TLL7|NUOB_ACIAC NADH-quinone oxidoreductase subunit B OS=Acidovorax citrulli
(strain AAC00-1) GN=nuoB PE=3 SV=1
Length = 159
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MSEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQK 149
Query: 101 VKR 103
++R
Sbjct: 150 IRR 152
>sp|A9BNB3|NUOB_DELAS NADH-quinone oxidoreductase subunit B OS=Delftia acidovorans
(strain DSM 14801 / SPH-1) GN=nuoB PE=3 SV=1
Length = 159
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 41 MLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKK 100
M EPRWVISMGSCANGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ+K
Sbjct: 90 MSEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQK 149
Query: 101 VKR 103
++R
Sbjct: 150 IRR 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,197,568
Number of Sequences: 539616
Number of extensions: 1642182
Number of successful extensions: 5661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4565
Number of HSP's gapped (non-prelim): 699
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)