BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5277
(314 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HCG7|GBA2_HUMAN Non-lysosomal glucosylceramidase OS=Homo sapiens GN=GBA2 PE=1 SV=2
Length = 927
Score = 273 bits (699), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/288 (46%), Positives = 188/288 (65%), Gaps = 14/288 (4%)
Query: 28 PEEEPFSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCES 87
P++EP+ +N Y + D +DWKDLNLKF++ +YRDY L D FL ++P CL ++
Sbjct: 598 PDDEPWLRVNAYLIHDTADWKDLNLKFVLQVYRDYYLTGDQNFLKDMWPVCLAVMESEMK 657
Query: 88 FDKQGLGIVQNGGFPDQT----------AYCGGLHIAALACMVEMSSLLNDTQQQQQFSA 137
FDK G+++NGG+ DQT AYCGGL +AA+A MV+M++L Q +FS+
Sbjct: 658 FDKDHDGLIENGGYADQTYDGWVTTGPSAYCGGLWLAAVAVMVQMAALCGAQDIQDKFSS 717
Query: 138 KLTKASQVYHDLLWTGSYYKFDSSQSRHSDSIMADQLCGYLFLKASGV---NTEAIFPSA 194
L++ + Y LLW G YY +DSS S S+M+DQ G FLKA G+ +TE +FP+
Sbjct: 718 ILSRGQEAYERLLWNGRYYNYDSSSRPQSRSVMSDQCAGQWFLKACGLGEGDTE-VFPTQ 776
Query: 195 NIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEG 254
++ RAL TIF NV+ F G+MGAVNGM+P+G D+S++QS+EVW GV Y L+A M+ EG
Sbjct: 777 HVVRALQTIFELNVQAFAGGAMGAVNGMQPHGVPDKSSVQSDEVWVGVVYGLAATMIQEG 836
Query: 255 NVDEAWTTAGGLYRTVYERTGLGFETPEGLTGDKTYRSGGYMRALAVY 302
E + TA G YRTV+ER GL F+TPE + +RS YMR L+++
Sbjct: 837 LTWEGFQTAEGCYRTVWERLGLAFQTPEAYCQQRVFRSLAYMRPLSIW 884
>sp|Q5M868|GBA2_RAT Non-lysosomal glucosylceramidase OS=Rattus norvegicus GN=Gba2 PE=2
SV=2
Length = 912
Score = 271 bits (692), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/288 (46%), Positives = 186/288 (64%), Gaps = 14/288 (4%)
Query: 28 PEEEPFSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCES 87
P++EP+ +N Y + D +DWKDLNLKF++ +YRDY L D FL ++P CL ++
Sbjct: 589 PDDEPWLRVNAYLIHDTADWKDLNLKFVLQVYRDYYLTGDQGFLKDMWPVCLAVMESEMK 648
Query: 88 FDKQGLGIVQNGGFPDQT----------AYCGGLHIAALACMVEMSSLLNDTQQQQQFSA 137
FDK G+++NGG+ DQT AYCGGL +AA+A MV+M+ L Q +FS+
Sbjct: 649 FDKDQDGLIENGGYADQTYDGWVTTGPSAYCGGLWLAAVAVMVQMAVLCGAQDVQDKFSS 708
Query: 138 KLTKASQVYHDLLWTGSYYKFDSSQSRHSDSIMADQLCGYLFLKASGV---NTEAIFPSA 194
L + + Y LLW G YY +DSS S S+M+DQ G FL+A G+ +TE +FP+
Sbjct: 709 ILCRGREAYERLLWNGRYYNYDSSSQPQSRSVMSDQCAGQWFLRACGLGEGDTE-VFPTL 767
Query: 195 NIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEG 254
++ RAL TIF NV+ F G+MGAVNGM+P+G DRS++QS+EVW GV Y L+A M+ EG
Sbjct: 768 HVVRALKTIFELNVQAFAGGAMGAVNGMQPHGVPDRSSVQSDEVWVGVVYGLAATMIQEG 827
Query: 255 NVDEAWTTAGGLYRTVYERTGLGFETPEGLTGDKTYRSGGYMRALAVY 302
E + TA G YRTV+ER GL F+TPE + +RS YMR L+++
Sbjct: 828 LTWEGFRTAEGCYRTVWERLGLAFQTPEAYCQQRVFRSLAYMRPLSIW 875
>sp|Q69ZF3|GBA2_MOUSE Non-lysosomal glucosylceramidase OS=Mus musculus GN=Gba2 PE=2 SV=2
Length = 918
Score = 271 bits (692), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 186/288 (64%), Gaps = 14/288 (4%)
Query: 28 PEEEPFSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCES 87
P++EP+ +N Y + D +DWKDLNLKF++ IYRDY L D FL ++P CL ++
Sbjct: 589 PDDEPWLRVNAYLIHDTADWKDLNLKFVLQIYRDYYLTGDQGFLEDMWPVCLAVMESEMK 648
Query: 88 FDKQGLGIVQNGGFPDQT----------AYCGGLHIAALACMVEMSSLLNDTQQQQQFSA 137
FDK G+++NGG+ DQT AYCGGL +AA+A MV+M+ L Q++F++
Sbjct: 649 FDKDQDGLIENGGYADQTYDAWVTTGPSAYCGGLWLAAVAVMVQMAVLCGAQDVQERFAS 708
Query: 138 KLTKASQVYHDLLWTGSYYKFDSSQSRHSDSIMADQLCGYLFLKASGV---NTEAIFPSA 194
L + + Y LLW G YY +DSS S SIM+DQ G FL+A G+ +TE +FP+
Sbjct: 709 ILCRGREAYERLLWNGRYYNYDSSSHPQSRSIMSDQCAGQWFLRACGLGEGDTE-VFPTL 767
Query: 195 NIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEG 254
++ RAL TIF NV+ F G+MGAVNGM P+G DRS++QS+EVW GV Y L+A M+ EG
Sbjct: 768 HVVRALQTIFELNVQAFAGGAMGAVNGMHPHGVPDRSSVQSDEVWVGVVYGLAATMIQEG 827
Query: 255 NVDEAWTTAGGLYRTVYERTGLGFETPEGLTGDKTYRSGGYMRALAVY 302
E + TA G YRTV+ER GL F+TPE + +RS YMR L+++
Sbjct: 828 LTWEGFRTAEGCYRTVWERLGLAFQTPEAYCQQQVFRSLAYMRPLSIW 875
>sp|Q7KT91|C3390_DROME Non-lysosomal glucosylceramidase OS=Drosophila melanogaster
GN=CG33090 PE=1 SV=1
Length = 948
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 156/257 (60%), Gaps = 19/257 (7%)
Query: 68 IRFLTRVYPTCLELIRKCESFDKQGLGIVQNGGFPDQT----------AYCGGLHIAALA 117
I +L +Y +C ++ + +DK G+++N PDQT AYC GL +AAL
Sbjct: 685 IGYLKAMYASCKAIMERTIEYDKDNDGLIENTKMPDQTYDSWVMDGPSAYCSGLWLAALQ 744
Query: 118 CMVEMSSLLNDTQQQQQFSAKLTKASQVYHDLLWTGSYYKFDSSQSRHSDSIMADQLCGY 177
M M+++L+ ++ L K + + LW GSYY+FD S S H D+IMADQLCG+
Sbjct: 745 AMSAMATILDQPNDCLRYQDILEKGKRSLEEKLWNGSYYRFDLSHS-HRDTIMADQLCGH 803
Query: 178 LFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPN-------GDRDR 230
+LK+ G + E I+P N+ AL I+ NV GF G++GA NG N G D
Sbjct: 804 WYLKSCGFDYE-IYPKENVRTALKRIYDNNVMGFHEGNIGAANGFIANASEPTKPGHVDN 862
Query: 231 SAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGDKTY 290
S IQ+EEVW GV Y L+A M+ EG +EA+ TAGG+Y+T+ +R G+ FETPE L G+K Y
Sbjct: 863 SNIQAEEVWPGVVYALAATMIQEGMFEEAFQTAGGMYKTLSQRIGMNFETPEALYGEKRY 922
Query: 291 RSGGYMRALAVYAMQDA 307
RS GYMR L++++MQ A
Sbjct: 923 RSIGYMRPLSIWSMQVA 939
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 28 PEEEPFSLINGYNVFDVSDWKDLNLKFIVSIYRDY 62
P+EEPF+LIN YN+ DV+DWKDLN KF++ +YRDY
Sbjct: 582 PDEEPFTLINCYNIHDVNDWKDLNTKFVLQVYRDY 616
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 3 LVWTMGEVKFRSAANTHERYYTRWF 27
L W M +++F TH RYYT++F
Sbjct: 400 LAWDMPKIQFPRKMQTHTRYYTKYF 424
>sp|Q3BVJ6|GLND_XANC5 [Protein-PII] uridylyltransferase OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=glnD PE=3 SV=1
Length = 869
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 33 FSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCL-ELIRKCESFD 89
FSL GY D W D ++ + +++ +A H+++R L + L E++R ++D
Sbjct: 337 FSLRRGYLAADAESWPDGDVLQVFALFAQWAAHREVRGLHSLTARALAEVLRDLPAYD 394
>sp|Q8PAU4|GLND_XANCP [Protein-PII] uridylyltransferase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=glnD PE=3 SV=1
Length = 869
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 33 FSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCL-ELIRKCESFD 89
FSL GY D W D ++ + +++ +A H+++R L + L E++R ++D
Sbjct: 337 FSLRRGYLTADADTWPDGDVVQVFALFAQWAAHREVRGLHSLTARALAEVLRDLPAYD 394
>sp|Q4USS0|GLND_XANC8 [Protein-PII] uridylyltransferase OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=glnD PE=3 SV=1
Length = 869
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 33 FSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCL-ELIRKCESFD 89
FSL GY D W D ++ + +++ +A H+++R L + L E++R ++D
Sbjct: 337 FSLRRGYLTADADTWPDGDVVQVFALFAQWAAHREVRGLHSLTARALAEVLRDLPAYD 394
>sp|B0RW57|GLND_XANCB [Protein-PII] uridylyltransferase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=glnD PE=3 SV=1
Length = 869
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 33 FSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCL-ELIRKCESFD 89
FSL GY D W D ++ + +++ +A H+++R L + L E++R ++D
Sbjct: 337 FSLRRGYLTADADTWPDGDVVQVFALFAQWAAHREVRGLHSLTARALAEVLRDLPAYD 394
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,453,965
Number of Sequences: 539616
Number of extensions: 4636365
Number of successful extensions: 9179
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9159
Number of HSP's gapped (non-prelim): 15
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)