Query psy5277
Match_columns 314
No_of_seqs 203 out of 910
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 22:26:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5277.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5277hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rrs_A Cellobiose phosphorylas 99.9 1.1E-27 3.6E-32 247.4 15.0 283 7-302 379-729 (822)
2 3qde_A Cellobiose phosphorylas 99.9 3.9E-27 1.3E-31 243.1 17.8 282 7-302 372-716 (811)
3 3c68_A Uncharacterized protein 99.9 9.5E-25 3.2E-29 223.7 27.8 280 8-308 337-751 (761)
4 2z07_A Putative uncharacterize 99.9 1.4E-22 4.8E-27 194.9 25.5 232 48-308 101-416 (420)
5 1v7w_A Chitobiose phosphorylas 99.9 2.2E-24 7.4E-29 223.4 13.4 250 3-267 358-670 (807)
6 2jg0_A Periplasmic trehalase; 99.9 1.6E-22 5.3E-27 200.1 23.0 271 8-308 143-496 (535)
7 2okx_A Rhamnosidase B; alpha b 99.9 1.5E-20 5.1E-25 197.7 25.5 259 9-312 594-880 (956)
8 3cih_A Putative alpha-rhamnosi 99.9 2E-20 6.7E-25 192.0 22.7 204 48-287 383-602 (739)
9 1lf6_A Glucoamylase; (alpha/al 99.7 8.1E-16 2.8E-20 156.4 16.9 229 48-306 395-658 (684)
10 1ulv_A Glucodextranase; GH fam 99.6 1.2E-14 4E-19 152.9 18.6 232 49-308 386-661 (1020)
11 2p0v_A Hypothetical protein BT 99.6 6.2E-15 2.1E-19 141.4 15.1 226 48-303 179-457 (489)
12 2fba_A Glucoamylase Glu1; (alp 99.5 8.8E-13 3E-17 128.9 15.7 245 49-306 145-477 (492)
13 1gai_A Glucoamylase-471; hydro 99.4 5E-12 1.7E-16 122.7 20.1 220 62-306 141-420 (472)
14 2vn4_A Glucoamylase; hydrolase 99.3 8.1E-11 2.8E-15 117.5 17.5 224 61-306 141-425 (599)
15 3p2c_A Putative glycosyl hydro 99.3 6.1E-11 2.1E-15 113.0 15.7 229 49-303 163-439 (463)
16 3qt9_A Putative uncharacterize 99.2 1.7E-10 5.7E-15 109.0 14.4 229 49-303 135-411 (427)
17 3qry_B Putative uncharacterize 99.2 4E-10 1.4E-14 106.4 14.7 227 49-303 134-411 (426)
18 2rdy_A BH0842 protein; PSI-II, 97.5 0.00027 9.1E-09 72.9 10.2 98 46-143 445-561 (803)
19 2eab_A Alpha-fucosidase; glyco 97.1 0.00046 1.6E-08 71.7 6.5 80 49-128 506-599 (899)
20 1h54_A Maltose phosphorylase; 96.7 0.0024 8.2E-08 65.4 6.9 92 52-143 430-542 (754)
21 2gz6_A N-acetyl-D-glucosamine 95.6 0.096 3.3E-06 48.6 11.7 94 49-153 115-211 (388)
22 3k7x_A LIN0763 protein; Q92DQ0 93.4 0.33 1.1E-05 44.9 9.4 92 50-152 151-251 (349)
23 2ahf_A Unsaturated glucuronyl 91.8 1.8 6.2E-05 40.3 12.1 99 43-151 215-322 (377)
24 2zzr_A Unsaturated glucuronyl 91.4 0.99 3.4E-05 42.4 9.9 98 42-150 239-346 (397)
25 2gz6_A N-acetyl-D-glucosamine 88.7 3.2 0.00011 38.1 11.0 132 7-153 12-154 (388)
26 3k7x_A LIN0763 protein; Q92DQ0 88.5 1.8 6.1E-05 39.8 9.0 101 48-160 91-196 (349)
27 2wvx_A Mannosidase, putative a 83.6 1.2 4.2E-05 45.2 5.5 45 252-308 594-638 (744)
28 3gt5_A N-acetylglucosamine 2-e 82.0 11 0.00038 34.9 11.1 92 55-157 254-356 (402)
29 2ww2_A Mannosidase, alpha-1,2- 80.3 1 3.5E-05 45.7 3.5 45 252-308 596-640 (737)
30 1fp3_A N-acyl-D-glucosamine 2- 79.7 14 0.00049 33.9 11.1 93 54-157 252-360 (402)
31 2xsg_A Ccman5; hydrolase, mann 78.0 2.1 7.3E-05 43.5 5.0 37 113-149 462-499 (774)
32 3gt5_A N-acetylglucosamine 2-e 78.0 9.6 0.00033 35.3 9.3 91 51-153 54-151 (402)
33 3k11_A Putative glycosyl hydro 77.8 9.6 0.00033 36.2 9.2 106 48-161 144-255 (445)
34 2zzr_A Unsaturated glucuronyl 76.1 31 0.001 32.2 12.1 107 44-159 169-293 (397)
35 3pmm_A Putative cytoplasmic pr 71.7 24 0.00083 32.5 10.2 102 44-150 165-276 (382)
36 2ahf_A Unsaturated glucuronyl 67.5 26 0.0009 32.3 9.4 106 45-159 145-268 (377)
37 2zbl_A Putative isomerase; N-a 66.5 57 0.0019 30.2 11.7 93 55-157 253-362 (421)
38 1nc5_A Hypothetical protein YT 66.2 22 0.00077 32.5 8.7 98 54-161 92-194 (373)
39 1fp3_A N-acyl-D-glucosamine 2- 65.4 31 0.0011 31.5 9.6 86 55-151 62-159 (402)
40 3k11_A Putative glycosyl hydro 63.6 42 0.0014 31.8 10.1 100 44-150 197-307 (445)
41 2zbl_A Putative isomerase; N-a 62.3 15 0.0005 34.3 6.7 93 50-152 112-210 (421)
42 3pmm_A Putative cytoplasmic pr 52.4 39 0.0013 31.1 7.7 100 42-149 226-332 (382)
43 1nc5_A Hypothetical protein YT 49.8 59 0.002 29.6 8.5 99 45-150 139-254 (373)
44 1l1y_A Cellobiohydrolase; alph 42.6 42 0.0014 32.7 6.1 57 34-94 426-483 (678)
45 2jg0_A Periplasmic trehalase; 31.6 59 0.002 31.4 5.6 39 237-276 125-163 (535)
46 4fus_A RTX toxins and related 31.0 1.1E+02 0.0038 30.0 7.1 50 34-87 425-474 (695)
47 1g9g_A Cellulase CEL48F; proce 23.7 1.6E+02 0.0053 28.6 6.6 57 34-94 398-455 (629)
No 1
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.95 E-value=1.1e-27 Score=247.35 Aligned_cols=283 Identities=10% Similarity=0.012 Sum_probs=204.2
Q ss_pred hhHHHHHHhhhhccccc-ccCC-CCCCc-ccCCCccccccCCcccccChhHHHHHHHHHHHhCCHHHHHH----------
Q psy5277 7 MGEVKFRSAANTHERYY-TRWF-PEEEP-FSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTR---------- 73 (314)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-~~g~-p~~~p-~~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~---------- 73 (314)
+..++++..+....... ..|. |+.++ +... -+....+.|.|+++|+|+++++|++.|||.+||++
T Consensus 379 ~~pe~ar~~il~~~~~Q~~dG~v~h~~~p~~~~--g~~~~~~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~ 456 (822)
T 3rrs_A 379 LIPERARERIIDIASTQFADGSAYHQYQPLTKR--GNNDIGSGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGS 456 (822)
T ss_dssp TCHHHHHHHHHHHHTTCCTTSCCCSEEETTTTE--ECTTTCSCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTC
T ss_pred cCHHHHHHHHHHHHHhhcccCcccceecCcCCC--CccCCCCcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccc
Confidence 34566666555444444 5555 88763 4321 12222356788889999999999999999999986
Q ss_pred ---HHHHHHHHHHHHHhhCCCCCcccccCC------C----------------------CchHHhHHHHHHHHHHHHHHH
Q psy5277 74 ---VYPTCLELIRKCESFDKQGLGIVQNGG------F----------------------PDQTAYCGGLHIAALACMVEM 122 (314)
Q Consensus 74 ---~~p~vk~al~~~~~~d~d~dGL~~~~g------~----------------------~d~t~~~~al~y~AL~~~a~l 122 (314)
+|++++++++|+.++ .+++||+..+. . ...+++++++||.||+.+++|
T Consensus 457 ~~tl~eh~~ra~~~~~~~-~g~~GLp~~g~gDWnD~ln~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~l 535 (822)
T 3rrs_A 457 EVPLFEHLTRSFEFTVTH-RGPHGLPLIGRADWNDCLNLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAEL 535 (822)
T ss_dssp CEEHHHHHHHHHHHHHHS-BCTTSSBBCBTCSSSTTCCTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhc-CCCCCCcccCCCcchhhcccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHH
Confidence 466999999999975 46789987421 0 012289999999999999999
Q ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhCcCcceee--ecCCCCC-CCCcccccc--ccchhhhhhcCCCCCCCCChH---
Q psy5277 123 SSLLNDTQQQQQFSAKLTKASQVYHDLLWTGSYYK--FDSSQSR-HSDSIMADQ--LCGYLFLKASGVNTEAIFPSA--- 194 (314)
Q Consensus 123 A~~lG~~~~a~~~~~~a~~~k~~~~~~lW~~~~~~--~d~~~~~-~~~~~~~~q--l~gq~~~~~lgl~~~~il~~e--- 194 (314)
|+.+|+++.+++|+++|+++|++|+++|||+++|. +|..+.+ .+..+.++| +.+|.|+++. |+++++
T Consensus 536 A~~~G~~~~A~~~~~~A~~lk~a~~~~~Wdg~~y~ra~d~dg~~~gs~~~~~~~i~~~~q~~avls-----Gia~~e~~~ 610 (822)
T 3rrs_A 536 AARRGLADVADRARGHVAEMRDALLTDGWDGSWFLRAYDYYGNPIGTDAHDEGKIWIEPQGFAVMA-----GVGVGEGPQ 610 (822)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTBCSSSBCCEECTTSCEESCTTSSSCCEEHHHHHHHHHT-----TTTCCSSTT
T ss_pred HHHcCChHHHHHHHHHHHHHHHHHHHhccCcceeEEEEcCCCCCccccCCCCceEEeccchhHhhc-----CCCCccccc
Confidence 99999999999999999999999999999998765 6554332 233444443 4467777876 456788
Q ss_pred ----HHHHHHHHHHhhccCCcCCCccccccCCCC------C-CCCCC---CCCCCCCCCccHHHHHHHHHHHCCChHHHH
Q psy5277 195 ----NIARALATIFSTNVRGFEAGSMGAVNGMKP------N-GDRDR---SAIQSEEVWTGVTYLLSAAMLYEGNVDEAW 260 (314)
Q Consensus 195 ----~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p------~-g~~~~---~~~~~g~vW~~~~~~lA~~~~~~G~~~~A~ 260 (314)
+++++|++|.+.+++++ |+....+| + |.+.. ...++|.+|++.+.|++.++.++|+.++|.
T Consensus 611 ~~~~~a~~al~~v~~~L~t~~-----Girll~p~f~~~~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~ 685 (822)
T 3rrs_A 611 DTDAPAIKALDSVNEMLATDH-----GMVLQYPAYTTYQVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAF 685 (822)
T ss_dssp CTTSHHHHHHHHHHHHTEETT-----EEBSEESCCSSCCTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHH
T ss_pred chHHHHHHHHHHHHHHcCCCC-----eEEEcCCCcccccCCCCcccccCCCccccccccccHHHHHHHHHHHcCCHHHHH
Confidence 99999999999888886 43211111 1 21111 134678999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-hCCCCCCCccccCCCCC-CCCCchhhhHHH
Q psy5277 261 TTAGGLYRTVYER-TGLGFETPEGLTGDKTY-RSGGYMRALAVY 302 (314)
Q Consensus 261 ~l~~~~~~~~~~~-~g~~~~~PE~~~~~g~~-~~~~Y~r~~~~w 302 (314)
++++.+....... .....+.||.++++..- ..++.+|..++|
T Consensus 686 ~~~~~l~p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~G~~~~~w 729 (822)
T 3rrs_A 686 DYYKRITPAYREDISDVHRLEPYVYAQMIAGKEAVRHGEAKNSW 729 (822)
T ss_dssp HHHHHHCHHHHGGGHHHHCSCSSSCEEEECCTTSTTTTCEEEES
T ss_pred HHHHHhCcccccchhHhhccCcEEEeccccccCCCCCCCccchh
Confidence 9999988876220 12234699999998421 135677766533
No 2
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.95 E-value=3.9e-27 Score=243.12 Aligned_cols=282 Identities=10% Similarity=0.017 Sum_probs=202.5
Q ss_pred hhHHHHHHhhhhcc-cccccCC-CCCCc-ccCCCccccccCCcccccChhHHHHHHHHHHHhCCHHHHHH----------
Q psy5277 7 MGEVKFRSAANTHE-RYYTRWF-PEEEP-FSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTR---------- 73 (314)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~~~g~-p~~~p-~~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~---------- 73 (314)
+..++++..+.... +-...|. |+.++ +... -+....+.|.|+++|+|+++++|++.|||.+||++
T Consensus 372 ~~p~~~r~~il~~~~~Q~~dG~~~h~~~p~~~~--g~~~~~~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~ 449 (811)
T 3qde_A 372 QIPERARERLLDLAATQLEDGSAYHQYQPLTKK--GNNEIGSNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSK 449 (811)
T ss_dssp TCHHHHHHHHHHHHTTBCTTSCBCSEECTTTCC--EECTTCCCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEE
T ss_pred cCHHHHHHHHHHHHhhcccCCCccceecCCCCC--CCCCCCCCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcc
Confidence 34566665554444 3335566 88764 4321 12222356788888899999999999999999976
Q ss_pred ---HHHHHHHHHHHHHhhCCCCCcccccCC------C----------------------CchHHhHHHHHHHHHHHHHHH
Q psy5277 74 ---VYPTCLELIRKCESFDKQGLGIVQNGG------F----------------------PDQTAYCGGLHIAALACMVEM 122 (314)
Q Consensus 74 ---~~p~vk~al~~~~~~d~d~dGL~~~~g------~----------------------~d~t~~~~al~y~AL~~~a~l 122 (314)
+|++++++++|+.++ .+++||+..+. . ...+++++++||.||+.+++|
T Consensus 450 ~~tl~eh~~ra~~~~~~~-~g~~GL~~~g~~DWnD~ln~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~l 528 (811)
T 3qde_A 450 ADTMFEHLTRSFYHVVNN-LGPHGLPLIGRADWNDCLNLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKL 528 (811)
T ss_dssp EEEHHHHHHHHHHHHHTC-BCTTSSBBCBTCSSSTTCCSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhc-CCCCCCcccccCCchhhccccccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHH
Confidence 577999999999875 47789987421 0 012289999999999999999
Q ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhCcCcceee--ecCCCCC-CCCcccccc--ccchhhhhhcCCCCCCCCChH-HH
Q psy5277 123 SSLLNDTQQQQQFSAKLTKASQVYHDLLWTGSYYK--FDSSQSR-HSDSIMADQ--LCGYLFLKASGVNTEAIFPSA-NI 196 (314)
Q Consensus 123 A~~lG~~~~a~~~~~~a~~~k~~~~~~lW~~~~~~--~d~~~~~-~~~~~~~~q--l~gq~~~~~lgl~~~~il~~e-~~ 196 (314)
|+.+|+++.+++|+++|+++|++|+++|||+++|. +|..+.+ .+..+.++| +.+|.|+++. |+++++ ++
T Consensus 529 A~~lGd~~~A~~~~~~A~~lk~a~~~~~Wdg~~y~ra~~~dg~~~gs~~~~~~qi~~~~q~~avls-----Gia~~e~ra 603 (811)
T 3qde_A 529 CEYMGLEEEARKAQQHIDAMKEAILKYGYDGEWFLRAYDDFGRKVGSKENEEGKIFIESQGFCVMA-----EIGLEDGKA 603 (811)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHSBCSSSBCCEECTTSCEESSTTSSSCCEESHHHHHHHHT-----TCSSSSSHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHhccCcCeEEEEEcCCCCCCCccCCCCceEEecchhHHHHh-----CCCCchHHH
Confidence 99999999999999999999999999999998765 5543322 223344433 3467777776 567999 99
Q ss_pred HHHHHHHHhhccCCcCCCccccccCCCC------C-CCCCC---CCCCCCCCCccHHHHHHHHHHHCCChHHHHHHHHHH
Q psy5277 197 ARALATIFSTNVRGFEAGSMGAVNGMKP------N-GDRDR---SAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGL 266 (314)
Q Consensus 197 ~~~l~~v~~~~~~~~~gG~~G~~~~~~p------~-g~~~~---~~~~~g~vW~~~~~~lA~~~~~~G~~~~A~~l~~~~ 266 (314)
+++|++|.+.+++++ |+....+| + |.+.. ...++|.+|++.+.|++.++.++|+.++|.++++.+
T Consensus 604 ~~~m~~v~~~L~t~~-----Glrll~p~f~~~~~d~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l 678 (811)
T 3qde_A 604 LKALDSVKKYLDTPY-----GLVLQNPAFTRYYIEYGEISTYPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKI 678 (811)
T ss_dssp HHHHHHHHHHHCCTT-----CCCSEESCCCSCCTTTGGGGTSCTTSTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCc-----ceEeecCCccccCCCCCceeccCCCccccccccchHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 999999999888886 33211111 1 11111 144778999999999999999999999999998887
Q ss_pred HHHHHHHh--CCCCCCCccccCCCCCC-CCCchhhhHHH
Q psy5277 267 YRTVYERT--GLGFETPEGLTGDKTYR-SGGYMRALAVY 302 (314)
Q Consensus 267 ~~~~~~~~--g~~~~~PE~~~~~g~~~-~~~Y~r~~~~w 302 (314)
.... ... ....+.||.++++.... .++.+|..++|
T Consensus 679 ~p~~-~~~~~~~~~~~Py~~~~~~~~~~~p~~Gr~~~~w 716 (811)
T 3qde_A 679 APAY-IEDVSDIHKLEPYVYAQMVAGKDAKRHGEAKNSW 716 (811)
T ss_dssp CGGG-SGGGHHHHCSCTTSCEEEECCTTSTTTTCEEEES
T ss_pred Chhh-hcchhhhcCcCcEEeccccccccCCCCCCCcchh
Confidence 7654 210 11246999999884321 35667766555
No 3
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=99.94 E-value=9.5e-25 Score=223.69 Aligned_cols=280 Identities=11% Similarity=0.093 Sum_probs=199.3
Q ss_pred hHHHHHHhhhhccccc----------ccCC-CCCCcc-------cCCCccccccCCcccccChhHHHHHHHHHHHhCCHH
Q psy5277 8 GEVKFRSAANTHERYY----------TRWF-PEEEPF-------SLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIR 69 (314)
Q Consensus 8 ~~~~~~~~~~~~~~~~----------~~g~-p~~~p~-------~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~TgD~~ 69 (314)
..+.+++++.++.+++ +.|. |+.... +....|+.. ...+|+|++++++||+.|||.+
T Consensus 337 ~~elAr~~L~~l~~~Q~~~~d~~r~~~~G~IP~~~~~~~~p~r~g~~~~~~~~-----~sqPPl~~~av~~yy~~tgD~~ 411 (761)
T 3c68_A 337 NPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNER-----NTKPSLAAWSVMEVYNVTQDKT 411 (761)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCSSCGGGTTCCCSBBCSSCCGGGTSCCSSCBCS-----CCCCCCHHHHHHHHHHHHCCHH
T ss_pred CHHHHHHHHHHHHHhhhhcccCCccCCCCEeeeeeccCCcccccCccccccCC-----CCCcHHHHHHHHHHHHHhCCHH
Confidence 5688999999998873 4566 776521 111223322 1334779999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hCCCCCccccc--------------------------------------------------
Q psy5277 70 FLTRVYPTCLELIRKCES-FDKQGLGIVQN-------------------------------------------------- 98 (314)
Q Consensus 70 fl~~~~p~vk~al~~~~~-~d~d~dGL~~~-------------------------------------------------- 98 (314)
||+++||.|+++++|..+ .+.+++||++.
T Consensus 412 fL~e~~P~L~~~~~w~~~~rd~d~~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 491 (761)
T 3c68_A 412 WVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPA 491 (761)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCSSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcCccEEecccccccccCCCcchhccccccccchhcccccccchhccccccccchhhh
Confidence 999999999999999988 45678899861
Q ss_pred -------CCCCch-----------------------------------------------HHhHHHHHHHHHHHHHHHHH
Q psy5277 99 -------GGFPDQ-----------------------------------------------TAYCGGLHIAALACMVEMSS 124 (314)
Q Consensus 99 -------~g~~d~-----------------------------------------------t~~~~al~y~AL~~~a~lA~ 124 (314)
+|. |. .+.+|+++|.+++.+++||+
T Consensus 492 ~~~a~weSG~-D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~ 570 (761)
T 3c68_A 492 QVAASWESGR-DDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMAT 570 (761)
T ss_dssp HHHHHHHHTC-TTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCCC-CcchhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 121 00 25679999999999999999
Q ss_pred HcCCcHHHHHHHHHHHHHHHHHHHhCcCcc---eeeecCCCCCCC----Cccccc--cccchhhhhhcCCCCCCCCChHH
Q psy5277 125 LLNDTQQQQQFSAKLTKASQVYHDLLWTGS---YYKFDSSQSRHS----DSIMAD--QLCGYLFLKASGVNTEAIFPSAN 195 (314)
Q Consensus 125 ~lG~~~~a~~~~~~a~~~k~~~~~~lW~~~---~~~~d~~~~~~~----~~~~~~--ql~gq~~~~~lgl~~~~il~~e~ 195 (314)
.+|+++.+++|+++|++++++|+++|||++ ||+++..+.+.. ..+.++ .-.++++++.+ +++++++
T Consensus 571 ~LG~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~~~~~~~~~~~g~~~sn~~~~~s~~~pL~~-----Gl~~~e~ 645 (761)
T 3c68_A 571 ILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN-----GAATQAN 645 (761)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEECCSSCCTTSCSSCBCGGGCCCGGGGHHHHT-----TCSCHHH
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEecCCCccccccccceeecchhhHHHHHHHHc-----CCCCHHH
Confidence 999999999999999999999999999864 555544322111 012222 22446777776 5578999
Q ss_pred HHHHHHHHHh--hccCCcCCCccccccCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Q psy5277 196 IARALATIFS--TNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRTVYER 273 (314)
Q Consensus 196 ~~~~l~~v~~--~~~~~~~gG~~G~~~~~~p~g~~~~~~~~~g~vW~~~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~~~ 273 (314)
++++++++.+ .+.++ .|.......+-......++.|.+|+.++++++.++.++|..++|.++++.+++.. ..
T Consensus 646 a~~vl~~L~~~~~l~t~-----~Girtls~~~p~y~p~~yw~GpvW~~~~~lli~aL~~~G~~d~A~~l~~~~~~~~-~~ 719 (761)
T 3c68_A 646 ADAVVKVMLDPKEFNTF-----VPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHA-KG 719 (761)
T ss_dssp HHHHHHHHTCTTTTCCS-----SCSCSSCTTCTTCCTTCTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TT
T ss_pred HHHHHHHHhChhhhcCC-----CCccccCCCCcccCCCccccCCcccchHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HH
Confidence 9999999976 23332 2332111111011113668889999999999999999999999999999887654 32
Q ss_pred hCCCCCCCccccCC-CCCCCCCchhhhHHHHHHHHH
Q psy5277 274 TGLGFETPEGLTGD-KTYRSGGYMRALAVYAMQDAY 308 (314)
Q Consensus 274 ~g~~~~~PE~~~~~-g~~~~~~Y~r~~~~w~~~~al 308 (314)
+--.+.++|.|++. |.+.++ ..++|+....|
T Consensus 720 ~~~~G~~~E~yd~~tg~p~G~----~~fgWSaa~~l 751 (761)
T 3c68_A 720 LTADGPIQENYNPLTGAQQGA----PNFSWSAAHLY 751 (761)
T ss_dssp TTSSSCCCSEECTTTCCEESC----SSCHHHHHHHH
T ss_pred HhhCCceeeEecCCCCCcCcC----CCchHHHHHHH
Confidence 21135689999988 665554 67799866544
No 4
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.91 E-value=1.4e-22 Score=194.94 Aligned_cols=232 Identities=13% Similarity=0.056 Sum_probs=172.0
Q ss_pred cccChhHHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHh-hCCCCCccccc-----CCCC------ch-------
Q psy5277 48 KDLNLKFIVSIYRDYALHKD----IRFLTRVYPTCLELIRKCES-FDKQGLGIVQN-----GGFP------DQ------- 104 (314)
Q Consensus 48 ~D~~~~fi~~~~~y~~~TgD----~~fl~~~~p~vk~al~~~~~-~d~d~dGL~~~-----~g~~------d~------- 104 (314)
.+.+|++++++++||+.||| .+||+++||.++++++|..+ .+.+++||+.. +|.. +.
T Consensus 101 ~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~p~l~~~~~~~~~~~d~~~~Gl~~~~~~we~G~~~~~~w~~~~~~~~~~ 180 (420)
T 2z07_A 101 ITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVE 180 (420)
T ss_dssp SCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCBSSGGGGTCTTCGGGHHHHHTCCC-
T ss_pred CcCCcHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceeeecCCCcCCCCCccccccccccCCC
Confidence 45678899999999999999 99999999999999999987 55577898752 1210 00
Q ss_pred -----------------------------------------------------HHhHHHHHHHHHHHHHHHHHHcCCcHH
Q psy5277 105 -----------------------------------------------------TAYCGGLHIAALACMVEMSSLLNDTQQ 131 (314)
Q Consensus 105 -----------------------------------------------------t~~~~al~y~AL~~~a~lA~~lG~~~~ 131 (314)
.+.+|+++|.+++.+++||+.+|++
T Consensus 181 ~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~~-- 258 (420)
T 2z07_A 181 NLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQED-- 258 (420)
T ss_dssp ----------CCSCC-------CHHHHHHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred CcchhhhhhhhccccccCCcHHHHHHHHHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCcc--
Confidence 1346999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHHhCcCc---ceeeecCCCCCCCCccccccccchhhhhhcCCCCCCCCChHHHHHHHHHHHhhcc
Q psy5277 132 QQQFSAKLTKASQVYHDLLWTG---SYYKFDSSQSRHSDSIMADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNV 208 (314)
Q Consensus 132 a~~~~~~a~~~k~~~~~~lW~~---~~~~~d~~~~~~~~~~~~~ql~gq~~~~~lgl~~~~il~~e~~~~~l~~v~~~~~ 208 (314)
+++|+++|+++|++|++ |||+ .|++++..+. .........+++++.+ +++++++++++++++.+ +.
T Consensus 259 a~~~~~~a~~~~~ai~~-~Wd~~~g~~~d~~~~~g----~~~~~~~~~~~~pL~~-----g~~~~~~a~~v~~~l~~-~~ 327 (420)
T 2z07_A 259 PYEIEEWIVRGEVGLEA-LWDREAGFYFSWDLVAG----EPIAVKTSAGFLPLFA-----GTPHQGRASLLAQEAER-WG 327 (420)
T ss_dssp CHHHHHHHHHHHHHHHH-TEETTTTEECCEETTTT----EECCCCBGGGGTHHHH-----TCSCHHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHHHHHH-hhCcccCeeEeeeCCCC----CeeccccHHhHHHHHc-----CCCCHHHHHHHHHHHHH-Hh
Confidence 89999999999999999 9985 3555654321 1111222334556665 56889999999999863 33
Q ss_pred --CCcCCCccccccCCCCCCCCC--CCCCCCCCCCccHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhCCCCCCCccc
Q psy5277 209 --RGFEAGSMGAVNGMKPNGDRD--RSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRTVYERTGLGFETPEGL 284 (314)
Q Consensus 209 --~~~~gG~~G~~~~~~p~g~~~--~~~~~~g~vW~~~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~ 284 (314)
++ .|..... + +.+. ...++.|.+|+.++++++.++.++|..++|.++++..++.+ .+.+ +.|.|
T Consensus 328 ~~~~-----~gi~t~~-~-~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~-~~~~----~~E~y 395 (420)
T 2z07_A 328 EKAR-----YLLPSVD-P-TSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALM-EREG----FREYY 395 (420)
T ss_dssp TTCS-----SSCBSBC-T-TSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHC----SEEEE
T ss_pred ccCC-----CCcCcCC-C-cCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hcCC----eeeee
Confidence 32 1332211 1 1111 12567789999999999999999999999999999988887 5444 57999
Q ss_pred cCC-CCCCCCCchhhhHHHHHHHHH
Q psy5277 285 TGD-KTYRSGGYMRALAVYAMQDAY 308 (314)
Q Consensus 285 ~~~-g~~~~~~Y~r~~~~w~~~~al 308 (314)
++. |.+.++ ..++|+....|
T Consensus 396 d~~~g~~~g~----~~fgWs~~~~l 416 (420)
T 2z07_A 396 DPLTGQGRGG----EGFSWSAALAL 416 (420)
T ss_dssp CTTTCCEEEE----ESCHHHHHHHH
T ss_pred CCCCCCcCCC----CCCchHHHHHH
Confidence 998 655444 57799876554
No 5
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.91 E-value=2.2e-24 Score=223.37 Aligned_cols=250 Identities=13% Similarity=0.097 Sum_probs=181.0
Q ss_pred ccchhhHHHHHHhhhhccccc-ccC-C-CCCCccc------CCCcc---------------ccccCCcccccChhHHHHH
Q psy5277 3 LVWTMGEVKFRSAANTHERYY-TRW-F-PEEEPFS------LINGY---------------NVFDVSDWKDLNLKFIVSI 58 (314)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~g-~-p~~~p~~------~~~~y---------------~~~D~~~w~D~~~~fi~~~ 58 (314)
|+ +.+.+.++..+.++.... ..| . |+-+|+. ..+.| +.+ ..-|.|.++|+++++
T Consensus 358 l~-~~~p~~ar~~l~~~~~~Q~~~G~~~p~~~p~~~~~~~g~~~~~~~~~~~g~~~~~~~~~g~-~~~~~D~~lw~~~~~ 435 (807)
T 1v7w_A 358 VP-HANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPTVVPTPSDEDKIHGI-KDTCSDDHLWLIPTI 435 (807)
T ss_dssp CT-TTCHHHHHHHHHHHHHTBCTTSCBCSEECGGGGCC----------------------CCCG-GGCBSSGGGGHHHHH
T ss_pred Hh-hcCHHHHHHHHHHHHhccccCCCcceeeeeccccccccccCCccccccccCCCcchhhcCC-CCCccchhhHHHHHH
Confidence 44 667889999999887555 445 3 6555321 11111 111 246778889999999
Q ss_pred HHHHHHhCCHHHHHHHHHH-----------HHHHHHHHHhhCCCCCcccccCCCCch----------HHhHHHHHHHHHH
Q psy5277 59 YRDYALHKDIRFLTRVYPT-----------CLELIRKCESFDKQGLGIVQNGGFPDQ----------TAYCGGLHIAALA 117 (314)
Q Consensus 59 ~~y~~~TgD~~fl~~~~p~-----------vk~al~~~~~~d~d~dGL~~~~g~~d~----------t~~~~al~y~AL~ 117 (314)
++||++|||.+||+++||. ++++++|+.++ .+++||+.... .|| .+++|+++|.||+
T Consensus 436 ~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~-~~~~GL~~~~~-~DW~D~~~~~~g~~v~~~a~~y~al~ 513 (807)
T 1v7w_A 436 CKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEY-VGQTGICKGLR-ADWNDCLNLGGGESSMVSFLHFWALQ 513 (807)
T ss_dssp HHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHS-BCTTSCBEEET-CSSSTTCCCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhc-CCCCCCcccCC-CCCCCcCCCCCCeehhHHHHHHHHHH
Confidence 9999999999999999995 99999999885 46689987421 222 2889999999999
Q ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcC--cceee--ecCCCCC----CCCccccccccchhhhhhcCCCCCC
Q psy5277 118 CMVEMSSLLNDTQQQQQFSAKLTKASQVYHDLLWT--GSYYK--FDSSQSR----HSDSIMADQLCGYLFLKASGVNTEA 189 (314)
Q Consensus 118 ~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~--~~~~~--~d~~~~~----~~~~~~~~ql~gq~~~~~lgl~~~~ 189 (314)
.+++||+.+|+++.+++|+++|+++|++|+++||+ +++|. ++..+.+ .+..++.. +.+|.+++++ |
T Consensus 514 ~~a~la~~lG~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f~~~~~~d~~~~g~~~~~~~~~~-~~~~~~al~~-----g 587 (807)
T 1v7w_A 514 EFIDLAKFLGKDQDVNTYTEMAANVREACETHLWDDEGGWYIRGLTKNGDKIGTAQQQEGRVH-LESNTLAVLS-----G 587 (807)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEECTTSCEESCTTCSSCCEE-HHHHHHHHHT-----T
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeeeeeeccCCCCcCCccCCCCcCc-ccchHHHHhh-----C
Confidence 99999999999999999999999999999999998 56664 3322111 11112222 2456677765 6
Q ss_pred CCChHHHHHHHHHHHhhccCCcCCCccccccCCCC-------CCCCCC---CCCCCCCCCccHHHHHHHHHHHCCChHHH
Q psy5277 190 IFPSANIARALATIFSTNVRGFEAGSMGAVNGMKP-------NGDRDR---SAIQSEEVWTGVTYLLSAAMLYEGNVDEA 259 (314)
Q Consensus 190 il~~e~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p-------~g~~~~---~~~~~g~vW~~~~~~lA~~~~~~G~~~~A 259 (314)
+++++++++++++|.+.+.+++ |.....+| .|.+.. ...++|.+|++.+.+++.++.+.|+.++|
T Consensus 588 ~~~~e~a~~~l~~v~~~L~~~~-----G~~~~~p~~~~~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A 662 (807)
T 1v7w_A 588 LASQERGEQAMDAVDEHLFSPY-----GLHLNAPSFSTPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRA 662 (807)
T ss_dssp CSCHHHHHHHHHHHHHHHEETT-----EECSEESCCCSCCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCC-----ceeecCCcccccCcCCceeeccCCccccccccccchHHHHHHHHHHcCCHHHH
Confidence 6899999999999988776543 32111111 021111 13467899999999999999999999999
Q ss_pred HHHHHHHH
Q psy5277 260 WTTAGGLY 267 (314)
Q Consensus 260 ~~l~~~~~ 267 (314)
.++++.+.
T Consensus 663 ~~l~~~~~ 670 (807)
T 1v7w_A 663 MKFYDALN 670 (807)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99988874
No 6
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.90 E-value=1.6e-22 Score=200.09 Aligned_cols=271 Identities=11% Similarity=0.043 Sum_probs=192.8
Q ss_pred hHHHHHHhhhhccccc-ccCC-CCCCcccCCCccccccCCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q psy5277 8 GEVKFRSAANTHERYY-TRWF-PEEEPFSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKC 85 (314)
Q Consensus 8 ~~~~~~~~~~~~~~~~-~~g~-p~~~p~~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~ 85 (314)
+.+.+++++..|...+ +.|. ||. ....|.. .+.+|+|++++++||+.|+| +||+++||.+++.++|.
T Consensus 143 ~~~~A~~~l~~~~~~~~~~G~IPng----~r~yY~~------~sqPPl~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww 211 (535)
T 2jg0_A 143 HWDKVADMVANFAHEIDTYGHIPNG----NRSYYLS------RSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYW 211 (535)
T ss_dssp CHHHHHHHHHHHHHHHHHHSSCCSB----SBGGGTT------CCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhccCCcccCC----CCccCCC------CCCccHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHH
Confidence 4688999999999888 5687 884 2345654 46677899999999999875 99999999999999998
Q ss_pred Hhh-CC--------------CCCccccc---------------------------------------CCCC---------
Q psy5277 86 ESF-DK--------------QGLGIVQN---------------------------------------GGFP--------- 102 (314)
Q Consensus 86 ~~~-d~--------------d~dGL~~~---------------------------------------~g~~--------- 102 (314)
++. +. +++||... +|..
T Consensus 212 ~~~~~~~~~g~~~~~~~~~~~G~~l~~y~~~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~ 291 (535)
T 2jg0_A 212 MDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNP 291 (535)
T ss_dssp TTTCTTCCTTEEETTEEECTTSCEEECCCCSCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSST
T ss_pred HhCCcccCccccccceeecCCCCcceeeccCCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCC
Confidence 763 22 22235321 1200
Q ss_pred -ch----H-----HhHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcCcc---eeeecCCCCCCCCcc
Q psy5277 103 -DQ----T-----AYCGGLHIAALACMVEMSSLLNDTQQQQQFSAKLTKASQVYHDLLWTGS---YYKFDSSQSRHSDSI 169 (314)
Q Consensus 103 -d~----t-----~~~~al~y~AL~~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~~~---~~~~d~~~~~~~~~~ 169 (314)
.. + +.+|+++|.+++.+++||+.+|+++.+++|+++|+++|++|++.|||++ |+++|..+......
T Consensus 292 ~~l~~~~t~~i~~VDlnA~ly~a~~~la~lA~~lG~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~~~~~~~~- 370 (535)
T 2jg0_A 292 QQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQ- 370 (535)
T ss_dssp TCGGGBCGGGEECHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTEECCC-
T ss_pred CcccccCCccchhhHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCCCCCEeee-
Confidence 00 0 7789999999999999999999999999999999999999999999853 45676543211111
Q ss_pred ccccccchhhhhhcCCCCCCCCChHHHHHHHHHHHhhccCCcCCCccccccCCCCCCCCCCCCCCCCC-CCccHHHHHHH
Q psy5277 170 MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEE-VWTGVTYLLSA 248 (314)
Q Consensus 170 ~~~ql~gq~~~~~lgl~~~~il~~e~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p~g~~~~~~~~~g~-vW~~~~~~lA~ 248 (314)
.....++++.+ +++++++++++++.+.+.+.+++ |..... .+...+..|. +|++++++++.
T Consensus 371 ---~~~s~~~PL~~-----gi~~~e~a~~v~~~l~~~l~t~~-----GlrT~s-----~~s~~yW~GpNvW~~~~~l~i~ 432 (535)
T 2jg0_A 371 ---LTAAALFPLYV-----NAAAKDRANKMATATKTHLLQPG-----GLNTTS-----VKSGQQWDAPNGWAPLQWVATE 432 (535)
T ss_dssp ---CBGGGGHHHHT-----TCSCHHHHHHHHHHHHHHTEETT-----EECSBS-----CCCSSSSSTTEECHHHHHHHHH
T ss_pred ---ehhhhHHHHhc-----CCCCHHHHHHHHHHHHHHhccCC-----CCCCCc-----CCCccccCCCCcchhHHHHHHH
Confidence 12233455555 56889999999999987555442 332222 1223455565 99999999999
Q ss_pred HHHHCCChHHHHHHHHHHHHHHHHHhCCCCCCCccccCC-CCCCCC--Cch-hhhHHHHHHHHH
Q psy5277 249 AMLYEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGD-KTYRSG--GYM-RALAVYAMQDAY 308 (314)
Q Consensus 249 ~~~~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~-g~~~~~--~Y~-r~~~~w~~~~al 308 (314)
++.++|..++|.++++..++.+...+.-.+.+||.|+++ +.+.+. -|- ....+|+...+|
T Consensus 433 gL~~yG~~~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l 496 (535)
T 2jg0_A 433 GLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTL 496 (535)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence 999999999999999887776633221134699999998 332221 121 367889866554
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.87 E-value=1.5e-20 Score=197.75 Aligned_cols=259 Identities=12% Similarity=0.102 Sum_probs=188.6
Q ss_pred HHHHHHhhhhccccc-ccCC-CCCCcccCCCccccccCCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q psy5277 9 EVKFRSAANTHERYY-TRWF-PEEEPFSLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCE 86 (314)
Q Consensus 9 ~~~~~~~~~~~~~~~-~~g~-p~~~p~~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~ 86 (314)
.+.+++.|..+.... ..|. |+..|... .... .|.+++|++++++||++|||.+||+++||.|+++++|+.
T Consensus 594 ~~lar~~L~~l~~~Q~~dG~ip~~~p~~~--~~~~------~~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~ 665 (956)
T 2okx_A 594 TEIVERCLNLVPGSADETPLYLDQVPSAW--SSVI------PNWTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYL 665 (956)
T ss_dssp CHHHHHHHHHGGGGTTTCTTCCSBSSCSS--CCCC------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccCCCcCccccccc--cCCC------cChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 455677777776554 4566 88776321 1111 345667999999999999999999999999999999999
Q ss_pred hhCCCCCcccccC--CCCch----------HHhHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcCcc
Q psy5277 87 SFDKQGLGIVQNG--GFPDQ----------TAYCGGLHIAALACMVEMSSLLNDTQQQQQFSAKLTKASQVYHDLLWTGS 154 (314)
Q Consensus 87 ~~d~d~dGL~~~~--g~~d~----------t~~~~al~y~AL~~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~~~ 154 (314)
++ .+.+||++.+ +..|| .+++++++|.+|+.+++||+.+|+++++++|+++|+++|++|+++||+++
T Consensus 666 ~~-~d~~GLl~~~~~~~~DW~d~~~~~~G~~~~~~a~~~~al~~~a~lA~~LG~~~~a~~y~~~A~~lk~ai~~~~wd~~ 744 (956)
T 2okx_A 666 EH-IDDSGLLNMAGWNLLDWAPIDQPNEGIVTHQNLFLVKALRDSRALAAAAGATEEADAFAARADLLAETINAVLWDEE 744 (956)
T ss_dssp TT-BCTTSSBCCSSCCCCCSSSCCCCSSSEEHHHHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHHHHSEETT
T ss_pred hc-CCCCCCEEeCCCCccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 86 4668998742 12222 16889999999999999999999998899999999999999999999853
Q ss_pred --eee--ecCCCCCCCCccccccccchhhhhhcCCCCCCCCChHHHHHHHHHHHhhccCCcCCCccccccCCCCCCCCCC
Q psy5277 155 --YYK--FDSSQSRHSDSIMADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDR 230 (314)
Q Consensus 155 --~~~--~d~~~~~~~~~~~~~ql~gq~~~~~lgl~~~~il~~e~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p~g~~~~ 230 (314)
+|. ++..+.+.+ . .. ..++.+++++ +++++++++++ +++.+.. |
T Consensus 745 ~g~y~d~~~~~g~~~~-~-~~--~~s~~lall~-----Gl~p~~~~~av-~~Ll~~~----------------~------ 792 (956)
T 2okx_A 745 KRAYIDCIHADGRRSD-V-YS--MQTQVVAYLC-----GVAQGEREAVI-EGYLSSP----------------P------ 792 (956)
T ss_dssp TTEECSEECTTSCBCC-C-CB--HHHHHHHHHT-----TCSCHHHHHHH-HHHHHSC----------------C------
T ss_pred CCEEEeeecCCCCccc-c-cc--cHHHHHHHHh-----CCCCHHHHHHH-HHHhcCC----------------C------
Confidence 443 332221111 1 11 2345556665 66888887766 5543310 1
Q ss_pred CCCCC-CCCCccHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhCCCCCCCccccCCCC-------C--CCCCchhhhH
Q psy5277 231 SAIQS-EEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGDKT-------Y--RSGGYMRALA 300 (314)
Q Consensus 231 ~~~~~-g~vW~~~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~g~-------~--~~~~Y~r~~~ 300 (314)
..++. |++|++ ++++.++.+.|+.++|.++++..+..+ .+.| ...+||.|++... + ..+|+.....
T Consensus 793 ~gy~~~Gt~w~~--~~li~aLar~G~~d~A~~ll~~~~~~~-~~~g-~tt~~E~~d~~~~~~~~~~~~~~s~nh~Wsag~ 868 (956)
T 2okx_A 793 PAFVQIGSPFMS--FFYYEALEKAGRQTLMLDDIRRNYGQM-LRYD-ATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAP 868 (956)
T ss_dssp TTSBCCCSHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTT-CSSCCSSCSSCCTTSSSTTSSCSCSCCGGGCTH
T ss_pred cccccCCChhHH--HHHHHHHHHCCCHHHHHHHHHHHHHHH-HhcC-CCccceeccCCCCCcccCCCcccccCcHHHHHH
Confidence 12333 788964 889999999999999999999888887 5567 4678999997532 2 2578888888
Q ss_pred HHHHHHHHccCC
Q psy5277 301 VYAMQDAYLKGK 312 (314)
Q Consensus 301 ~w~~~~al~~~~ 312 (314)
+..++..+.|++
T Consensus 869 ~~~L~q~l~GI~ 880 (956)
T 2okx_A 869 GYFLGSSILGVK 880 (956)
T ss_dssp HHHHHHTTSCEE
T ss_pred HHHHHHHhcCcc
Confidence 888888888753
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=2e-20 Score=192.01 Aligned_cols=204 Identities=13% Similarity=0.181 Sum_probs=154.6
Q ss_pred cccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCcccccCC----CCch----------HHhHHHHHH
Q psy5277 48 KDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGLGIVQNGG----FPDQ----------TAYCGGLHI 113 (314)
Q Consensus 48 ~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~~g----~~d~----------t~~~~al~y 113 (314)
.|.+++|++++++||++|||.+||+++||.|+++++|+.++ .+++||++... ..|+ .+++|+++|
T Consensus 383 ~d~~l~wi~~~~~yy~~tGD~~~L~e~~p~l~~~ld~~~~~-~d~~GL~~~~~G~W~~~dW~d~~~~~~G~~~~~~a~~y 461 (739)
T 3cih_A 383 MDYTFYWFLSVYDYYMYSGDRHFVNQLYPRMQTMMDYVLGR-TNKNGMVEGMSGDWVFVDWADGYLDKKGELSFEQVLFC 461 (739)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTT-BCTTSCBCCCTTCBCCSCCCTTCCCCSSEEHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh-cCCCCCcccCCCCcccCCCcccccCCCCcchHHHHHHH
Confidence 35667799999999999999999999999999999999986 46789987531 0111 167899999
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcCcc--eeeecCCCCCCCCccccccccchhhhhhcCCCCCCCC
Q psy5277 114 AALACMVEMSSLLNDTQQQQQFSAKLTKASQVYHDLLWTGS--YYKFDSSQSRHSDSIMADQLCGYLFLKASGVNTEAIF 191 (314)
Q Consensus 114 ~AL~~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~~~--~~~~d~~~~~~~~~~~~~ql~gq~~~~~lgl~~~~il 191 (314)
.||+.+++||+.+|+++++++|+++|+++|++|+++|||++ +|..+..+.. ........+|.+++.+ |++
T Consensus 462 ~al~~~a~lA~~lG~~~~A~~y~~~A~~lk~a~~~~~wd~~~G~y~~~~~~G~---~~d~~~~~s~~laL~~-----Gl~ 533 (739)
T 3cih_A 462 RSLETMALCADLVGDKDGQQKYEKLASALKAKLEPTFWNNQKQAFVHNCVDGR---QSDAVTRYANMFSVFF-----DYL 533 (739)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTE---ECSCCCHHHHHHHHHT-----TCS
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCcccCeeEeecCCCC---cCcccchHHhHHHHHH-----CCC
Confidence 99999999999999999999999999999999999999864 4432111110 0111112245566665 668
Q ss_pred ChHHHHHHHHHHHhhccCCcCCCccccccCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHCCChHHHHHHHHHHHHHHH
Q psy5277 192 PSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRTVY 271 (314)
Q Consensus 192 ~~e~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p~g~~~~~~~~~g~vW~~~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~ 271 (314)
++++++++++++.+ +. + .++. .+|.++++++.++.++|+.++|.++++..+..+
T Consensus 534 ~~e~~~~v~~~L~~----~~--------------~-----~~~~--~tp~~~~~~~~aL~~~G~~d~A~~ll~~~w~~~- 587 (739)
T 3cih_A 534 NADKQQAIKQSVLL----ND--------------E-----ILKI--TTPYMRFYELEALCALGEQETVMKEMKAYWGGM- 587 (739)
T ss_dssp CHHHHHHHHHHTTT----CT--------------T-----SCCC--CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHhc----Cc--------------c-----cccc--cchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-
Confidence 99999888887733 10 0 1122 345668889999999999999999998887776
Q ss_pred HHhCCCCCCCccccCC
Q psy5277 272 ERTGLGFETPEGLTGD 287 (314)
Q Consensus 272 ~~~g~~~~~PE~~~~~ 287 (314)
.+.| ...++|.|++.
T Consensus 588 v~~G-attl~E~~~~~ 602 (739)
T 3cih_A 588 LKAG-ATSFWEKYNPE 602 (739)
T ss_dssp HTTT-CSSCCSCCCTT
T ss_pred HhCC-CceeEEecccc
Confidence 4466 45789999886
No 9
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.67 E-value=8.1e-16 Score=156.36 Aligned_cols=229 Identities=16% Similarity=0.125 Sum_probs=156.8
Q ss_pred cccChhHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHHHHhh-CCCCCcccccCCCCchHHhHHHHHHHHHHHHHHHHHH
Q psy5277 48 KDLNLKFIVSIYRDYALHKDIRFLTRVYPT-CLELIRKCESF-DKQGLGIVQNGGFPDQTAYCGGLHIAALACMVEMSSL 125 (314)
Q Consensus 48 ~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~-vk~al~~~~~~-d~d~dGL~~~~g~~d~t~~~~al~y~AL~~~a~lA~~ 125 (314)
.|.+..++++++ ++..+| +||. ++++++|+.++ ...+.|+=+..+ ... .++.++.+.||+++++||+.
T Consensus 395 ~D~~g~~l~~~~-~~~~~g-------~~~~~v~~al~~i~~~~~~~~~g~WE~~~-g~~-~~t~~~~~~aL~~~a~lA~~ 464 (684)
T 1lf6_A 395 LDEQADPIILSY-RLKRYD-------LYDSLVKPLADFIIKIGPKTGQERWEEIG-GYS-PATMAAEVAGLTCAAYIAEQ 464 (684)
T ss_dssp HHHHHHHHHHHH-HTTCGG-------GTTTTHHHHHHHHHHHCSSBSSCTTSSCC-BBC-HHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHH-HHHHcC-------chHHHHHHHHHHHHHhCCCCCcccccccC-CcC-HHHHHHHHHHHHHHHHHHHH
Confidence 566677998888 445666 8997 99999999883 333445544332 223 68888999999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhCcCcc-------eee--e-cCCCC--------------CCCCccccccccchhhhh
Q psy5277 126 LNDTQQQQQFSAKLTKASQVYHDLLWTGS-------YYK--F-DSSQS--------------RHSDSIMADQLCGYLFLK 181 (314)
Q Consensus 126 lG~~~~a~~~~~~a~~~k~~~~~~lW~~~-------~~~--~-d~~~~--------------~~~~~~~~~ql~gq~~~~ 181 (314)
+|+++.+++|++.|+++++.|++++|+++ +|. + |..+. ..++.+.++.+. ++
T Consensus 465 ~g~~~~a~~~~~~a~~i~~~i~~~~w~~~~~~g~~~~f~r~~~d~~~~~~~~~~~~~~~~~~~~~~~lDas~l~----~~ 540 (684)
T 1lf6_A 465 NKDYESAQKYQEKADNWQKLIDNLTYTENGPLGNGQYYIRIAGLSDPDADFMINIANGGGVYDQKEIVDPSFLE----LV 540 (684)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHEESSCSSTTSCEECSCBSSSCTTSCCEEEETTTTEEEEGGGCCCGGGGH----HH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHhccCCCcccccCCeeEEEeccCCCccccccccccccccCCCCCcEeHHHhH----HH
Confidence 99998899999999999999999999864 665 2 32211 123334444332 33
Q ss_pred hcCCCCCCCCChHHHHHHHHHHHhhccCCcCCCcccc-ccCCCCCC--CCCC--CCCCC--CCCCccHHHHHHHHHHHCC
Q psy5277 182 ASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGA-VNGMKPNG--DRDR--SAIQS--EEVWTGVTYLLSAAMLYEG 254 (314)
Q Consensus 182 ~lgl~~~~il~~e~~~~~l~~v~~~~~~~~~gG~~G~-~~~~~p~g--~~~~--~~~~~--g~vW~~~~~~lA~~~~~~G 254 (314)
.+|+. ..+++++.++++.|.+.+..... .|. .....+++ ...+ ++.++ +++|+.++++++..++..|
T Consensus 541 ~~G~~---~~~dpr~~~Tl~~i~~~L~~~~~---~G~~~~RY~~d~y~~~~~G~~f~~~g~g~~W~~~t~~~a~al~~~G 614 (684)
T 1lf6_A 541 RLGVK---SADDPKILNTLKVVDSTIKVDTP---KGPSWYRYNHDGYGEPSKTELYHGAGKGRLWPLLTGERGMYEIAAG 614 (684)
T ss_dssp HTTSS---CTTCHHHHHHHHHHHHHSEEEET---TEEEECSSTTCCCSCSBTTBCCSSSSCCCBBHHHHHHHHHHHHHTT
T ss_pred hcCCc---CCCCHHHHHHHHHHHHHhccCCC---CCCeEeccCCCCCCcccCCCccccCCCCCchHHHHHHHHHHHHHhC
Confidence 44331 22556999999999876532110 121 11111221 1111 22344 6999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHhCCCCCCCccccCC-CCCC-CCCchhhhHHHHHHH
Q psy5277 255 NVDEAWTTAGGLYRTVYERTGLGFETPEGLTGD-KTYR-SGGYMRALAVYAMQD 306 (314)
Q Consensus 255 ~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~-g~~~-~~~Y~r~~~~w~~~~ 306 (314)
+ +|.++++++.... ... +.+||+|++. |.|. ++ .+++|+-..
T Consensus 615 ~--~A~~~~~~l~~~a-~~~---gllpE~~~~~~g~~~G~a----~PqaWSha~ 658 (684)
T 1lf6_A 615 K--DATPYVKAMEKFA-NEG---GIISEQVWEDTGLPTDSA----SPLNWAHAE 658 (684)
T ss_dssp C--CCHHHHHHHHHHS-CTT---SCCCSCBCTTTCCBCSSC----SSCHHHHHH
T ss_pred h--HHHHHHHHHHHhc-ccC---CccCeeecCCCCCCCCCC----cchHHHHHH
Confidence 8 8999999988876 433 4599999995 7766 33 568887654
No 10
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.61 E-value=1.2e-14 Score=152.92 Aligned_cols=232 Identities=15% Similarity=0.093 Sum_probs=154.1
Q ss_pred ccChhHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHhhCC-CCCcccccCCCCchHHhHHHHHHHHHHHHHHHHHHc
Q psy5277 49 DLNLKFIVSIYRDYALHKDIRFLTRVYP-TCLELIRKCESFDK-QGLGIVQNGGFPDQTAYCGGLHIAALACMVEMSSLL 126 (314)
Q Consensus 49 D~~~~fi~~~~~y~~~TgD~~fl~~~~p-~vk~al~~~~~~d~-d~dGL~~~~g~~d~t~~~~al~y~AL~~~a~lA~~l 126 (314)
|.+.++++++++|++ + | +++|| .++++++|+.++-. .+.++=+..+ . ..+++.++.+.||+++++||+.+
T Consensus 386 D~~g~~l~~~~~~~~-~-d----~~~w~~~v~~al~~i~~~g~~~~~~~WEe~~-g-~~~~t~~~~~~AL~~aa~lA~~~ 457 (1020)
T 1ulv_A 386 DETAFPILLANQIGR-T-D----AGFYRNELKPAADYLVAAGPKTPQERWEETG-G-YSTSTLASQIAALAAAADIAGKN 457 (1020)
T ss_dssp HHHHHHHHHHHHHTC-C-C----HHHHHHTHHHHHHHHHHHCSCBSBCTTSSCC-B-EEHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHh-c-C----HHHHHHHHHHHHHHHHHhCCCCChhhhcccC-C-cCHHHHHHHHHHHHHHHHHHHHc
Confidence 777889999999865 4 5 78999 99999999988511 1223333222 1 22688899999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHhCcCcc-------eee-e--cCCCC--------------CCCCccccccccchhhhhh
Q psy5277 127 NDTQQQQQFSAKLTKASQVYHDLLWTGS-------YYK-F--DSSQS--------------RHSDSIMADQLCGYLFLKA 182 (314)
Q Consensus 127 G~~~~a~~~~~~a~~~k~~~~~~lW~~~-------~~~-~--d~~~~--------------~~~~~~~~~ql~gq~~~~~ 182 (314)
|+++.+++|++.|+++++.|+++||+++ +|. . |..+. ..+..+.++.+. ...
T Consensus 458 G~~~~a~~w~~~Ad~i~~~i~~~~w~~~g~~~~~g~f~r~~~dg~~~~~~~~~~~n~~~~~~~~~~lDas~l~----l~~ 533 (1020)
T 1ulv_A 458 GDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGNGAGVHPENAVLDGGFLE----FVR 533 (1020)
T ss_dssp TCHHHHHHHHHHHHHHHHTHHHHHEESSCSSTTSCEECSEESSSCTTSCCEEECSTTCCEEEGGGCCBGGGGH----HHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCCcccccccCeeEEEecCCCcccccccccccccccCCCCCeeeHHHHH----HHH
Confidence 9999999999999999999999999864 555 2 21110 012333333322 112
Q ss_pred cCCCCCCCCChHHHHHHHHHHHhhccCCcCCCccc-cccCCCCCCC--C-CCCCCC---CCCCCccHHHHHHHHHHHCCC
Q psy5277 183 SGVNTEAIFPSANIARALATIFSTNVRGFEAGSMG-AVNGMKPNGD--R-DRSAIQ---SEEVWTGVTYLLSAAMLYEGN 255 (314)
Q Consensus 183 lgl~~~~il~~e~~~~~l~~v~~~~~~~~~gG~~G-~~~~~~p~g~--~-~~~~~~---~g~vW~~~~~~lA~~~~~~G~ 255 (314)
+|+- ..+++++.++++.|.+.+..... .| ....+.+++- . +...++ .+++|+.+++++|..++..|+
T Consensus 534 ~G~~---~~~dpr~~~Tl~~i~~~L~~~~~---~G~~~~RY~~D~Y~~~~dG~~~~~~g~g~~W~l~T~wlae~~~~~G~ 607 (1020)
T 1ulv_A 534 LGVK---APADPYVADSLAETDASISQETP---GGRMWHRYTYDGYGEKADGSPWDGTGIGRLWPLLSGERGEYALANGQ 607 (1020)
T ss_dssp TTSS---CTTCHHHHHHHHHHHHHHEEEET---TEEEECSBTTCCCSCCTTSCCCSSCCCCCBCTHHHHHHHHHHHHTTC
T ss_pred hCCC---CCCcHHHHHHHHHHHHHhcccCC---CCceeecCCccccccccCCCcccCCCCCChHHHHHHHHHHHHHHhhH
Confidence 3331 13566889999999876532110 12 1111222110 1 111111 378999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCccccC----------CCCCC-CCCchhhhHHHHHHHHH
Q psy5277 256 VDEAWTTAGGLYRTVYERTGLGFETPEGLTG----------DKTYR-SGGYMRALAVYAMQDAY 308 (314)
Q Consensus 256 ~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~----------~g~~~-~~~Y~r~~~~w~~~~al 308 (314)
+|.++++++.... ... +.+||+|+. .|.+. ++ .+++|+...-+
T Consensus 608 --~A~~~~~~l~~~a-~~~---GllpEq~~~g~~~~~~~~~tG~p~~g~----~PqaWSha~~I 661 (1020)
T 1ulv_A 608 --DALPYLETMHSAA-NAG---YMIPEQVWDRDEPTSYGHELGRSTGSA----SPLSWAMAQYV 661 (1020)
T ss_dssp --CCHHHHHHHHHTS-CTT---CCCCSCBBCCSSCCSSCCCBTSBCSSC----BSCHHHHHHHH
T ss_pred --HHHHHHHHHHHhc-ccc---CCcceeecccccccccCCcCCccccCC----cHHHHHHHHHH
Confidence 8999988888776 433 459999985 24433 33 67899876543
No 11
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.61 E-value=6.2e-15 Score=141.37 Aligned_cols=226 Identities=14% Similarity=0.151 Sum_probs=159.5
Q ss_pred cccChhHHHHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHHh-hCCC-----------------------------CCccc
Q psy5277 48 KDLNLKFIVSIYRDYALHKDIRFLTRVY-PTCLELIRKCES-FDKQ-----------------------------GLGIV 96 (314)
Q Consensus 48 ~D~~~~fi~~~~~y~~~TgD~~fl~~~~-p~vk~al~~~~~-~d~d-----------------------------~dGL~ 96 (314)
.|....+|.++|+||+.|||.+|+.+.| ..|+++++++.+ ++.+ ..||+
T Consensus 179 lDSla~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi 258 (489)
T 2p0v_A 179 IDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLI 258 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCC
T ss_pred hhhhHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCce
Confidence 4556678999999999999999999888 799999999977 3322 23553
Q ss_pred c----cCCCCchH-----HhHHHHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHhCcCc-----ceeeecCC
Q psy5277 97 Q----NGGFPDQT-----AYCGGLHIAALACMVEMSSLLN-DTQQQQQFSAKLTKASQVYHDLLWTG-----SYYKFDSS 161 (314)
Q Consensus 97 ~----~~g~~d~t-----~~~~al~y~AL~~~a~lA~~lG-~~~~a~~~~~~a~~~k~~~~~~lW~~-----~~~~~d~~ 161 (314)
. ++ .|.+ +..|+..+.+|+.+++|++.+| +.+++++++++|+++++++.++.+.. ..|.|...
T Consensus 259 ~S~fRPS--DDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVD 336 (489)
T 2p0v_A 259 ASAFRPS--DDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKYAVCNHPKYGKIYAFEVD 336 (489)
T ss_dssp CCSBCTT--SCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEEC
T ss_pred eCCCCCC--CcchhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCccEEEEEec
Confidence 2 22 1222 7889999999999999999999 56779999999999999999999963 24555332
Q ss_pred C--C--CCCCccccccccchhhhhhcCCCCCCCCChHHHHHHHHHHHhhccCCcCCCccccccCCCCC--CCCCCCCCCC
Q psy5277 162 Q--S--RHSDSIMADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPN--GDRDRSAIQS 235 (314)
Q Consensus 162 ~--~--~~~~~~~~~ql~gq~~~~~lgl~~~~il~~e~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p~--g~~~~~~~~~ 235 (314)
+ . ..|++..|+-+. +..+|. --.++++.+.+++.|.+.+. +| ... |..-. |++..+ .
T Consensus 337 G~G~~~~mDDanvpSLLs----lPylG~---~~~dDpiy~nTr~~IlS~~N-Py-----y~~-G~~~~GIGspH~~---~ 399 (489)
T 2p0v_A 337 GFGNQLLMDDANVPSLIA----LPYLGD---VKVTDPIYQNTRKFVWSEDN-PY-----FFK-GSAGEGIGGPHIG---Y 399 (489)
T ss_dssp SSSCEECCCCSSSSCSTT----HHHHTS---SCTTCHHHHHHHHHHTSTTS-TT-----EEE-CSSCEEECCTTTC---T
T ss_pred CCCCcccCCCCCccHHHH----HHHhCC---CCCCCHHHHHHHHHHHhhcC-Cc-----ccc-cccccCCCCCCCC---C
Confidence 2 1 134454454332 223433 12468899999999988543 32 111 10000 323222 1
Q ss_pred CCCCccHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhCCCCCCCccccCC-CCCCCCCchhhhHHHH
Q psy5277 236 EEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGD-KTYRSGGYMRALAVYA 303 (314)
Q Consensus 236 g~vW~~~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~-g~~~~~~Y~r~~~~w~ 303 (314)
+++||....+.+ +-.++.++++++++++.++. ...| -++|+|+.+ +. .|.|+.=+|+
T Consensus 400 ~~~Wpmsll~~a---lts~d~~E~~~~L~~l~~t~-~gtG---LmhEs~d~~~~~----~~TR~wFaWa 457 (489)
T 2p0v_A 400 DMIWPMSIMMKA---FTSQNDAEIKTCIKMLMDTD-AGTG---FMHESFNKNDPK----NFTRAWFAWQ 457 (489)
T ss_dssp TEECHHHHHHHH---HTCCCHHHHHHHHHHHHHTS-TTSC---SCCSEEETTEEE----EEECSCBHHH
T ss_pred CchHHHHHHHHH---HhcCCHHHHHHHHHHHHhhC-CCCC---eeeeeECCCCCC----cCCCcccHHH
Confidence 679997776666 34689999999999988776 3344 499999998 65 8999999996
No 12
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=99.46 E-value=8.8e-13 Score=128.86 Aligned_cols=245 Identities=11% Similarity=0.076 Sum_probs=160.1
Q ss_pred ccChhHHHHHHHHHHHhCCHHHH---------------HHHH-HHHHHHHHHHHh-hCCCCCcccccCCCCchHHhHHHH
Q psy5277 49 DLNLKFIVSIYRDYALHKDIRFL---------------TRVY-PTCLELIRKCES-FDKQGLGIVQNGGFPDQTAYCGGL 111 (314)
Q Consensus 49 D~~~~fi~~~~~y~~~TgD~~fl---------------~~~~-p~vk~al~~~~~-~d~d~dGL~~~~g~~d~t~~~~al 111 (314)
|.+...+++++.|++...+...+ +++| |.+++.++|+.+ ++..+-||=|..+ ... +++.+.
T Consensus 145 D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~pd~dlWEer~-g~~-~~T~~~ 222 (492)
T 2fba_A 145 DGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDSTGFDLWEENQ-GRH-FFTSLV 222 (492)
T ss_dssp THHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSCEECTTSCCE-ECC-HHHHHH
T ss_pred cchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCCCCCCcCccC-CCC-hHHHHH
Confidence 66677899999998877666654 6787 999999999988 5444457766553 223 688888
Q ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHh---CcCc--ceee--ecCCCCCCCCccccccccchhhhhhcC
Q psy5277 112 HIAALACMVEMSSLLNDTQQQQQFSAKLTKASQVYHDL---LWTG--SYYK--FDSSQSRHSDSIMADQLCGYLFLKASG 184 (314)
Q Consensus 112 ~y~AL~~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~---lW~~--~~~~--~d~~~~~~~~~~~~~ql~gq~~~~~lg 184 (314)
.+.||..+++||+.+|+++.+++|++.++++++.+.++ +||+ .+|. +.......+..+.++.|+.-. +-++
T Consensus 223 ~~~AL~~aa~lA~~~g~~~~a~~w~~~ad~i~~~I~~~~~~~w~~~~~~f~~~~~~~~~~~~~~lDas~Ll~~~--~~f~ 300 (492)
T 2fba_A 223 QQKALAYAVDIAKSFDDGDFANTLSSTASTLESYLSGSDGGFVNTDVNHIVENPDLLQQNSRQGLDSATYIGPL--LTHD 300 (492)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHSTTTCCEETTTTEECSSHHHHHTTSCCSCCTHHHHHHH--HHSC
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEeccccccCCCCcccHHHHHHHH--hccc
Confidence 88999999999999999998999999999999999988 9986 3544 210000023455665554200 0121
Q ss_pred C--CCCCC--CChHHHHHHHHHHHhhccCCc--CCCc-cccccCCCCCCCC-CCCCCCCCCCCccHHHHHHHHH------
Q psy5277 185 V--NTEAI--FPSANIARALATIFSTNVRGF--EAGS-MGAVNGMKPNGDR-DRSAIQSEEVWTGVTYLLSAAM------ 250 (314)
Q Consensus 185 l--~~~~i--l~~e~~~~~l~~v~~~~~~~~--~gG~-~G~~~~~~p~g~~-~~~~~~~g~vW~~~~~~lA~~~------ 250 (314)
. ..+++ .+++++.+.++.|.+.+...+ ++|. .|...+-++ ++. +.-.-..|++|+.+|+|+|..+
T Consensus 301 ~~~~~~~~~~p~Dpr~l~Tl~ai~~~L~~~~pin~~~~~g~~v~RY~-~D~y~g~~~~~g~pw~lcT~w~ae~ly~al~~ 379 (492)
T 2fba_A 301 IGESSSTPFDVDNEYVLQSYYLLLEDNKDRYSVNSAYSAGAAIGRYP-EDVYNGDGSSEGNPWFLATAYAAQVPYKLAYD 379 (492)
T ss_dssp TTSCCCCSCCTTCHHHHHHHHHHHHHHHHHCGGGTTCSSCCCCCSCT-TCCBCSSSBSSCCCBHHHHHHHHHHHHHHHHH
T ss_pred cccccCCccCCCCHHHHHHHHHHHHHHhcccCccccCcceeEEEeCC-CCCCCCCCccCCCcHHHHHHHHHHHHHHHHHH
Confidence 0 00012 357899999999987653222 1110 011001111 111 0000012789999999999833
Q ss_pred --HHCC-------------------------C----------------------hHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy5277 251 --LYEG-------------------------N----------------------VDEAWTTAGGLYRTVYERTGLGFETP 281 (314)
Q Consensus 251 --~~~G-------------------------~----------------------~~~A~~l~~~~~~~~~~~~g~~~~~P 281 (314)
...| + .++|..+++++..+. ...|+ +|
T Consensus 380 ~~~~~g~~~i~~~~~~f~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~A~~~l~~~~~~~-~~~Gl---ls 455 (492)
T 2fba_A 380 AKSASNDITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSFLQVILDHI-NDDGS---LN 455 (492)
T ss_dssp HHHHTCCEEEEGGGHHHHHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSC---CC
T ss_pred HHHhcCceecchhhHHHHHhhhhhhccccccccccccceeccCchhHHHHHHHHHHHHHHHHHHHHHHC-CCCCC---Cc
Confidence 2444 3 578999988888776 54554 99
Q ss_pred ccccCC-CCCCCCCchhhhHHHHHHH
Q psy5277 282 EGLTGD-KTYRSGGYMRALAVYAMQD 306 (314)
Q Consensus 282 E~~~~~-g~~~~~~Y~r~~~~w~~~~ 306 (314)
|+|+.+ |.+.+- .+++||...
T Consensus 456 Eq~d~~tG~~~ga----~PltwSha~ 477 (492)
T 2fba_A 456 EQLNRYTGYSTGA----YSLTWSSGA 477 (492)
T ss_dssp SEECTTTCCEESS----TTCHHHHHH
T ss_pred cccCCCCCCCCCc----cchHHHHHH
Confidence 999995 887765 678888654
No 13
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=99.45 E-value=5e-12 Score=122.65 Aligned_cols=220 Identities=11% Similarity=0.055 Sum_probs=147.8
Q ss_pred HHHhCCHHHHHH-HHHHHHHHHHHHHh-hCCCCCcccccCCCCchHHhHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q psy5277 62 YALHKDIRFLTR-VYPTCLELIRKCES-FDKQGLGIVQNGGFPDQTAYCGGLHIAALACMVEMSSLLNDTQQQQQFSAKL 139 (314)
Q Consensus 62 ~~~TgD~~fl~~-~~p~vk~al~~~~~-~d~d~dGL~~~~g~~d~t~~~~al~y~AL~~~a~lA~~lG~~~~a~~~~~~a 139 (314)
+..+|+.+++++ +||.+++.++|+.+ ++..+.||=|..+ ... +++.+..+.||..+++||+.+|++ +++|++.+
T Consensus 141 l~~~g~~~~~~~~~w~~i~~~l~~v~~~w~~pd~dlWEer~-g~~-~~T~~~~~~AL~~aa~lA~~~g~~--~~~w~~~a 216 (472)
T 1gai_A 141 LLDNGYTSAATEIVWPLVRNDLSYVAQYWNQTGYDLWEEVN-GSS-FFTIAVQHRALVEGSAFATAVGSS--CSWCDSQA 216 (472)
T ss_dssp HHHTTCHHHHHHTHHHHHHHHHHHHHHHTTSCEECTTSCCE-EEE-HHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHH
T ss_pred HHHcCCccccchhHHHHHHHHHHHHHHhcCCCCCCCCcccC-CCC-HHHHHHHHHHHHHHHHHHHHcCCc--HHHHHHHH
Confidence 788999998876 99999999999988 5444457766553 223 688888889999999999999998 78999999
Q ss_pred HHHHHHHHHhCcCcceee-ecCCCCCCCCccccccccchhhhhhcCCC--------CCCCCChHHHHHHHHHHHhhccCC
Q psy5277 140 TKASQVYHDLLWTGSYYK-FDSSQSRHSDSIMADQLCGYLFLKASGVN--------TEAIFPSANIARALATIFSTNVRG 210 (314)
Q Consensus 140 ~~~k~~~~~~lW~~~~~~-~d~~~~~~~~~~~~~ql~gq~~~~~lgl~--------~~~il~~e~~~~~l~~v~~~~~~~ 210 (314)
+++++.+ +++||+.|.. +... .+..+.++.|++ ...+++ .|+ .+++++.+.++.|.+.+...
T Consensus 217 d~I~~~i-~~~w~g~f~~~~~~~---~~~~lDas~LL~----~~~~f~p~~~~~~~~~~-p~Dpr~l~Tl~ai~~~L~~~ 287 (472)
T 1gai_A 217 PQILCYL-QSFWTGSYILANFDS---SRSGKDTNTLLG----SIHTFDPEAGCDDSTFQ-PCSPRALANHKEVVDSFRSI 287 (472)
T ss_dssp HHHHHHH-GGGBCSSSBCSEESC---CSCCCCTHHHHH----HHTTCCTTCCSCTTTTC-TTSHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHH-HhhcCCceEEeecCC---CCCCcCHHHHHh----hhccCCccccccccCCC-CCCHHHHHHHHHHHHHHHHh
Confidence 9999999 8999976543 3111 122344444432 112211 011 26889999999998865321
Q ss_pred c--CCCc-cccccC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHH-----------------------------CC---
Q psy5277 211 F--EAGS-MGAVNG-MKPNGDRDRSAIQSEEVWTGVTYLLSAAMLY-----------------------------EG--- 254 (314)
Q Consensus 211 ~--~gG~-~G~~~~-~~p~g~~~~~~~~~g~vW~~~~~~lA~~~~~-----------------------------~G--- 254 (314)
| ..|. .|...+ .|-.+ ..+..+++|+.+|+|+|..+.+ .|
T Consensus 288 y~i~~~~~~g~g~~v~RY~~----D~y~gg~pw~lcT~wlae~l~~a~~~~~~~~~i~~~~~~~~ff~~~~~~~~~G~~~ 363 (472)
T 1gai_A 288 YTLNDGLSDSEAVAVGRYPE----DSYYNGNPWFLCTLAAAEQLYDALYQWDKQGSLEITDVSLDFFKALYSGAATGTYS 363 (472)
T ss_dssp CGGGTTCCTTSCCCCCSCTT----CCGGGSCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHCTTCCSEEEE
T ss_pred cCcCCCCcCcccceEEeCCC----CCCCCCCcHHHHHHHHHHHHHHHHHHhhccCceeecchhHHHHHhhcccccccccc
Confidence 1 1110 010001 11111 1234489999999999988652 45
Q ss_pred -------ChHH-----HHHHHHHHHHHHHHHhCCCCCCCccccCC-CCCCCCCchhhhHHHHHHH
Q psy5277 255 -------NVDE-----AWTTAGGLYRTVYERTGLGFETPEGLTGD-KTYRSGGYMRALAVYAMQD 306 (314)
Q Consensus 255 -------~~~~-----A~~l~~~~~~~~~~~~g~~~~~PE~~~~~-g~~~~~~Y~r~~~~w~~~~ 306 (314)
+.++ |.++++++..+. ...|+ +||+|+.. |.+.+- .+++||...
T Consensus 364 ~~~~~~~~~~~~~~~~A~~~~e~~~~~~-~~~Gl---lsEq~d~~tG~~~gn----~PlawSha~ 420 (472)
T 1gai_A 364 SSSSTYSSIVSAVKTFADGFVSIVETHA-ASNGS---LSEQFDKSDGDELSA----RDLTWSYAA 420 (472)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTCC---CCSEECTTTCCEESS----SSCHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHC-CCCCC---cccccCCCCCCCCCc----cchHHHHHH
Confidence 4445 888888877776 44554 99999995 887765 667887654
No 14
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=99.28 E-value=8.1e-11 Score=117.54 Aligned_cols=224 Identities=10% Similarity=0.086 Sum_probs=142.8
Q ss_pred HHHHhCCHHHHHH-HHHHHHHHHHHHHh-hCCCCCcccccCCCCchHHhHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Q psy5277 61 DYALHKDIRFLTR-VYPTCLELIRKCES-FDKQGLGIVQNGGFPDQTAYCGGLHIAALACMVEMSSLLNDTQQQQQFSAK 138 (314)
Q Consensus 61 y~~~TgD~~fl~~-~~p~vk~al~~~~~-~d~d~dGL~~~~g~~d~t~~~~al~y~AL~~~a~lA~~lG~~~~a~~~~~~ 138 (314)
++..+|+.+++++ +||.++++++|+.+ ++..+.||=|..+ ... +++.+..+.||.++++||+.+|++ +++|++.
T Consensus 141 ~~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~~d~dlWEer~-g~~-~~T~~~~~~aL~~aa~lA~~~g~~--~~~w~~~ 216 (599)
T 2vn4_A 141 WLINNNYQSTVSNVIWPIVRNDLNYVAQYWNQTGFDLWEEVN-GSS-FFTVANQHRALVEGATLAATLGQS--GSAYSSV 216 (599)
T ss_dssp HHHHTTCHHHHHHHTHHHHHHHHHHHHHHTTSCEECTTSCCE-EEE-HHHHHHHHHHHHHHHHHHHHHTCC--CHHHHHH
T ss_pred HHHHhCCcccccHHHHHHHHHHHHHHHHhCCCCCCCeeeecC-Ccc-hHHHHHHHHHHHHHHHHHHHcCCC--HHHHHHH
Confidence 3778999999886 89999999999988 4444446666542 223 677788889999999999999988 7899999
Q ss_pred HHHHHHHHHHhCcCcc-eee--ecCCCCCCCCccccccccchhhhhhcCCC-----CCCC--CChHHHHHHHHHHHhhcc
Q psy5277 139 LTKASQVYHDLLWTGS-YYK--FDSSQSRHSDSIMADQLCGYLFLKASGVN-----TEAI--FPSANIARALATIFSTNV 208 (314)
Q Consensus 139 a~~~k~~~~~~lW~~~-~~~--~d~~~~~~~~~~~~~ql~gq~~~~~lgl~-----~~~i--l~~e~~~~~l~~v~~~~~ 208 (314)
|+++++.+ +++|+++ .|. +... ...+..+.++.|++ ...+++ ..++ .+++++.+.++.|.+.+.
T Consensus 217 ad~i~~~i-~~~w~~~g~f~~~~~~~-~~~~~~lDas~LL~----~~~~f~~~~~~~~~~~~p~dpr~l~Tl~ai~~~L~ 290 (599)
T 2vn4_A 217 APQVLCFL-QRFWVSSGGYVDSNINT-NEGRTGKDVNSVLT----SIHTFDPNLGCDAGTFQPCSDKALSNLKVVVDSFR 290 (599)
T ss_dssp HHHHHHHH-GGGEETTTTEECSEESS-CCCCCCCBTHHHHH----HHHSCCGGGTTCTTTTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HhhcCCCCCEEEEecCc-cCCCCCcCHHHHhh----hhccCCccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999 8899743 233 2111 00123445544432 112211 0011 267899999999988553
Q ss_pred CCc--CCCc-cccccC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHH-----------------------------CCC
Q psy5277 209 RGF--EAGS-MGAVNG-MKPNGDRDRSAIQSEEVWTGVTYLLSAAMLY-----------------------------EGN 255 (314)
Q Consensus 209 ~~~--~gG~-~G~~~~-~~p~g~~~~~~~~~g~vW~~~~~~lA~~~~~-----------------------------~G~ 255 (314)
..| ..|. .|...+ .|-.+ ..+..+++|+.+++|+|..+.. .|.
T Consensus 291 ~~y~i~~g~~~g~~~~v~RY~~----D~y~Gg~pw~lcT~w~ae~l~~a~~~~~~~g~i~~~~~~~~ff~~~~~~~~~G~ 366 (599)
T 2vn4_A 291 SIYGVNKGIPAGAAVAIGRYAE----DVYYNGNPWYLATFAAAEQLYDAIYVWKKTGSITVTATSLAFFQELVPGVTAGT 366 (599)
T ss_dssp TTCGGGTTCCTTSCCCCCSBTT----CCGGGCCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHSTTCCSEE
T ss_pred hhcCcCCCCcCCceeEEEeCCC----CCCCCCCcHHHHHHHHHHHHHHHHHhhhccCceeeccchhHHHhhhcccccccc
Confidence 222 1110 010001 11111 1223488999999999987542 342
Q ss_pred h----------HH-----HHHHHHHHHHHHHHHhCCCCCCCccccCC-CCCCCCCchhhhHHHHHHH
Q psy5277 256 V----------DE-----AWTTAGGLYRTVYERTGLGFETPEGLTGD-KTYRSGGYMRALAVYAMQD 306 (314)
Q Consensus 256 ~----------~~-----A~~l~~~~~~~~~~~~g~~~~~PE~~~~~-g~~~~~~Y~r~~~~w~~~~ 306 (314)
. ++ |.++++++..+. ...| -+||+|+.. |.+.+- .+++||-..
T Consensus 367 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~a-~~~G---llsEqvd~~~G~~~gn----~PlawSha~ 425 (599)
T 2vn4_A 367 YSSSSSTFTNIINAVSTYADGFLSEAAKYV-PADG---SLAEQFDRNSGTPLSA----LHLTWSYAS 425 (599)
T ss_dssp EETTSHHHHHHHHHHHHHHHHHHHHHHTTS-CTTC---CCCSEECTTTCCEESS----SSCHHHHHH
T ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhc-CCCC---CcccccCCCCCccCCc----chHHHHHHH
Confidence 1 23 677766666554 3345 499999995 887765 677887554
No 15
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=99.28 E-value=6.1e-11 Score=113.00 Aligned_cols=229 Identities=16% Similarity=0.166 Sum_probs=149.0
Q ss_pred ccChhHHHHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHHh-hCCCC----------------------------Cccccc
Q psy5277 49 DLNLKFIVSIYRDYALHKDIRFLTRVY-PTCLELIRKCES-FDKQG----------------------------LGIVQN 98 (314)
Q Consensus 49 D~~~~fi~~~~~y~~~TgD~~fl~~~~-p~vk~al~~~~~-~d~d~----------------------------dGL~~~ 98 (314)
|.-..|+...++||+.|||.+|+.+-| .+++.+++-+.. .+.++ +||+.-
T Consensus 163 DSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S 242 (463)
T 3p2c_A 163 DSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVS 242 (463)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCBC
T ss_pred hhhhHHHHHHHHHHHhhCChhhhcHHHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCceec
Confidence 445567888899999999999997655 577777776654 22221 222221
Q ss_pred CC-C-CchH-----HhHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHHHHhCcC-----cceeeecCC--CC
Q psy5277 99 GG-F-PDQT-----AYCGGLHIAALACMVEMSSLL-NDTQQQQQFSAKLTKASQVYHDLLWT-----GSYYKFDSS--QS 163 (314)
Q Consensus 99 ~g-~-~d~t-----~~~~al~y~AL~~~a~lA~~l-G~~~~a~~~~~~a~~~k~~~~~~lW~-----~~~~~~d~~--~~ 163 (314)
.= + .|-+ +-.|.+...+|+.+++|++.+ ++.+++++++++|+++++++.++++. |+.|.|... +.
T Consensus 243 ~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEVDG~Gs 322 (463)
T 3p2c_A 243 SFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFGN 322 (463)
T ss_dssp SBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC
T ss_pred CCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEEEecCCC
Confidence 00 0 1212 667888899999999999988 67778999999999999999999996 234555332 22
Q ss_pred C--CCCccccccccchhhhhhcCCCCCCCCChHHHHHHHHHHHhhccCCcCCCccccccCCCCCCCCCCCCCCCCCCCcc
Q psy5277 164 R--HSDSIMADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTG 241 (314)
Q Consensus 164 ~--~~~~~~~~ql~gq~~~~~lgl~~~~il~~e~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p~g~~~~~~~~~g~vW~~ 241 (314)
. .|++..|+-+. +..+|. --.+++.-+.+.+.|.+....-|--|... .| -|++.. -.+++||.
T Consensus 323 ~~lmDDaNvPSLLs----lPylGf---~~~dDpiYqNTrk~IlS~~NPyY~~G~~~--~G---iG~PH~---~~~~~Wpm 387 (463)
T 3p2c_A 323 HHLMDDANVPSLLA----MPYLGD---VNVNDPIYQNTRRFVWSEDNPYFFKGKAG--EG---IGGPHI---GYDMVWPM 387 (463)
T ss_dssp EECCCCSSSSCSTT----HHHHTS---SCTTCHHHHHHHHHHTSTTSTTEEECSSC--EE---ECCTTT---CTTEECHH
T ss_pred ccCCCCCCchhHHH----HHHcCC---CCCCCHHHHHHHHHHHhccCCceeccCcc--cc---CCCCCC---CCCCchHH
Confidence 1 24455554433 233443 22568888999999977542212111100 00 033332 24679995
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhCCCCCCCccccCC-CCCCCCCchhhhHHHH
Q psy5277 242 VTYLLSAAMLYEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGD-KTYRSGGYMRALAVYA 303 (314)
Q Consensus 242 ~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~-g~~~~~~Y~r~~~~w~ 303 (314)
... ...+-.++.++++++++++.++. ...| -++|+|+.+ +. .|.|+.=+|+
T Consensus 388 sll---~~~lTs~d~~Ei~~~L~~l~~t~-~gtG---lmHEsvd~~~~~----~~TR~WFaWa 439 (463)
T 3p2c_A 388 SIM---MKAFTSQNDAEIKTCIKMLMDTD-AGTG---FMHESFHKDNPK----KFTRAWFAWQ 439 (463)
T ss_dssp HHH---HHHHTCCCHHHHHHHHHHHHHTS-TTSS---SCCSEEETTEEE----EEECSCBHHH
T ss_pred HHH---HHHhccCCHHHHHHHHHHHHhcC-CCCC---eeeeeECCCCCC----cCCCCchhhh
Confidence 533 22334478899999999988776 3344 499999998 55 8999999996
No 16
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=99.21 E-value=1.7e-10 Score=108.97 Aligned_cols=229 Identities=16% Similarity=0.101 Sum_probs=148.0
Q ss_pred ccChhHHHHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHHh-hCC----------------------------CCCccccc
Q psy5277 49 DLNLKFIVSIYRDYALHKDIRFLTRVY-PTCLELIRKCES-FDK----------------------------QGLGIVQN 98 (314)
Q Consensus 49 D~~~~fi~~~~~y~~~TgD~~fl~~~~-p~vk~al~~~~~-~d~----------------------------d~dGL~~~ 98 (314)
|.-..|+...+.||+.|||.+|+.+-| .+++.+++-+.. .+. ..+||+.-
T Consensus 135 DSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S 214 (427)
T 3qt9_A 135 DSLCYPVRLIHKYWKESGDETFFNYDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWS 214 (427)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCCHHHHHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCC
T ss_pred hhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceec
Confidence 444567888899999999999987644 467777765543 111 01333321
Q ss_pred CC-C-CchH-----HhHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHHHHhCcCc-----ceeeecCCC--C
Q psy5277 99 GG-F-PDQT-----AYCGGLHIAALACMVEMSSLL-NDTQQQQQFSAKLTKASQVYHDLLWTG-----SYYKFDSSQ--S 163 (314)
Q Consensus 99 ~g-~-~d~t-----~~~~al~y~AL~~~a~lA~~l-G~~~~a~~~~~~a~~~k~~~~~~lW~~-----~~~~~d~~~--~ 163 (314)
.= + .|-+ +-.|.+...+|+.+++|++.+ ++.+++++++++|+++++++.++...+ +.|.|...+ .
T Consensus 215 ~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~Gs 294 (427)
T 3qt9_A 215 GFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMGN 294 (427)
T ss_dssp SBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC
T ss_pred CCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC
Confidence 10 1 1222 667888889999999999998 577799999999999999999999952 345554332 2
Q ss_pred C--CCCccccccccchhhhhhcCCCCCCCCChHHHHHHHHHHHhhccCCcCCCccccccCCCCCCCCCCCCCCCCCCCcc
Q psy5277 164 R--HSDSIMADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTG 241 (314)
Q Consensus 164 ~--~~~~~~~~ql~gq~~~~~lgl~~~~il~~e~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p~g~~~~~~~~~g~vW~~ 241 (314)
. .|+...|+-+. +..+|. --.+++.-+...+.|.+....-|--|... .| -|++.. -.+++||.
T Consensus 295 ~~lMDDaNvPSLLs----lPylGf---~~~dDpiYqNTrk~IlS~~NPyy~~G~~~--~G---IG~PH~---~~~~~Wpm 359 (427)
T 3qt9_A 295 YNFMDDANVPSLLS----IPYLEY---KGIEDEVYQNTRKFILSKNNRFFFEGKAA--KG---IGSPHT---PDQYIWHI 359 (427)
T ss_dssp EECCCCSSSSCSTT----HHHHTS---SCTTCHHHHHHHHHHTSTTSTTEEECSSC--EE---ECCTTS---CTTEEEHH
T ss_pred ccccCCCCchhHHH----HHHcCC---CCCCCHHHHHHHHHHhcccCCceeccCcc--Cc---CCCCCC---CCCCchHH
Confidence 1 24455554433 234443 23578888999999977542222111100 00 033332 24579995
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhCCCCCCCccccCC-CCCCCCCchhhhHHHH
Q psy5277 242 VTYLLSAAMLYEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGD-KTYRSGGYMRALAVYA 303 (314)
Q Consensus 242 ~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~-g~~~~~~Y~r~~~~w~ 303 (314)
... ...+..++.++++++++++.++. ...| -++|.|+.+ +. .|.|+-=+|+
T Consensus 360 sl~---~~~lTs~d~~Ei~~~L~~l~~t~-~gtG---lmHEsvd~~~~~----~~TR~WFaWa 411 (427)
T 3qt9_A 360 ALS---MQGLTTNNQEEIDQLIKLLKETD-AGTG---YMHEGFHVDDPT----KFTRDWFAWS 411 (427)
T ss_dssp HHH---HHHHTCCCHHHHHHHHHHHHHTS-TTSS---SCCSEEETTEEE----EESCSCBHHH
T ss_pred HHH---HHHhhcCCHHHHHHHHHHHHhcC-CCCC---eeeeeECCCCCC----ccCCCcchhh
Confidence 532 33444578899999999988765 3344 499999998 55 8999999995
No 17
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=99.17 E-value=4e-10 Score=106.38 Aligned_cols=227 Identities=14% Similarity=0.083 Sum_probs=144.9
Q ss_pred ccChhHHHHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHHh-hCCC---------------------------CCcccccC
Q psy5277 49 DLNLKFIVSIYRDYALHKDIRFLTRVY-PTCLELIRKCES-FDKQ---------------------------GLGIVQNG 99 (314)
Q Consensus 49 D~~~~fi~~~~~y~~~TgD~~fl~~~~-p~vk~al~~~~~-~d~d---------------------------~dGL~~~~ 99 (314)
|.-..|+...+.||+.|||.+|+.+-| .+++.+++-+.. .+.. .+||+.-.
T Consensus 134 DSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~ 213 (426)
T 3qry_B 134 DSLCYPLQLAYLLWKETGETSQFDEIFVAATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSA 213 (426)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCS
T ss_pred hhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecC
Confidence 444567888899999999999987654 467777766544 2110 12333210
Q ss_pred C-C-CchH-----HhHHHHHHHHHHHHHHHHHH---cCCcHHHHHHHHHHHHHHHHHHHhCcCc-----ceeeecCC--C
Q psy5277 100 G-F-PDQT-----AYCGGLHIAALACMVEMSSL---LNDTQQQQQFSAKLTKASQVYHDLLWTG-----SYYKFDSS--Q 162 (314)
Q Consensus 100 g-~-~d~t-----~~~~al~y~AL~~~a~lA~~---lG~~~~a~~~~~~a~~~k~~~~~~lW~~-----~~~~~d~~--~ 162 (314)
= + .|-+ +-.|.+...+|+.+++|++. .|+++++++++++++++++++.++...+ +.|.|... +
T Consensus 214 FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~G 293 (426)
T 3qry_B 214 FRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLG 293 (426)
T ss_dssp BCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSS
T ss_pred CCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC
Confidence 0 0 1222 66788888999999999983 4888899999999999999999999952 34555332 2
Q ss_pred CC--CCCccccccccchhhhhhcCCCCCCC--CChHHHHHHHHHHHhhccCCcCCCccccccCCCCCCCCCCCCCCCCCC
Q psy5277 163 SR--HSDSIMADQLCGYLFLKASGVNTEAI--FPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEV 238 (314)
Q Consensus 163 ~~--~~~~~~~~ql~gq~~~~~lgl~~~~i--l~~e~~~~~l~~v~~~~~~~~~gG~~G~~~~~~p~g~~~~~~~~~g~v 238 (314)
.. .|+...|+- ++||-+|. .+++.-+...+.|.+....-|--|... .| -|++..+ .+++
T Consensus 294 s~~lmDDaNvPSL---------LslPylGf~~~dDpiYqNTrk~IlS~~NPyy~~G~~~--~G---iG~PH~~---~~~~ 356 (426)
T 3qry_B 294 NASIMDDPNVPSL---------LAAPYLGYCSVDDEVYQATRRTILSSENPYFYQGEYA--SG---LGSSHTF---YRYI 356 (426)
T ss_dssp CBCCCCCSSSSCS---------TTTTTTTSSCTTCHHHHHHHHHHTSTTSTTEEECSSC--EE---ECCTTSC---TTEE
T ss_pred CccccCCCCchhH---------HHHHHcCCCCCCCHHHHHHHHHHhcccCCceeccCcc--Cc---CCCCCCC---CCCc
Confidence 21 244444443 33332244 467888999999977542222111100 00 0333322 3579
Q ss_pred CccHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhCCCCCCCccccCC-CCCCCCCchhhhHHHH
Q psy5277 239 WTGVTYLLSAAMLYEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGD-KTYRSGGYMRALAVYA 303 (314)
Q Consensus 239 W~~~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~-g~~~~~~Y~r~~~~w~ 303 (314)
||.... ...+-.++.++++++++++.++. ...| -++|.|+.+ +. .|.|+-=+|+
T Consensus 357 Wpmsl~---~~~lTs~d~~Ei~~~L~~l~~t~-~gtG---lmHEsvd~~~~~----~~TR~WFaWa 411 (426)
T 3qry_B 357 WPIALS---IQGLTTRDKAEKKFLLDQLVACD-GGTG---VMHESFHVDDPT----LYSREWFSWA 411 (426)
T ss_dssp CHHHHH---HHHHTCSCHHHHHHHHHHHHHTS-TTSS---SCCSEEETTEEE----EEECSCCHHH
T ss_pred hHHHHH---HHHHhCCCHHHHHHHHHHHHhcC-CCCC---eeeeeECCCCCC----ccCCCchhhh
Confidence 994422 22223478899999999988765 3344 499999998 55 8999999996
No 18
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=97.55 E-value=0.00027 Score=72.94 Aligned_cols=98 Identities=14% Similarity=0.187 Sum_probs=72.4
Q ss_pred cccccChhHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHHHhhC-CCCCcccc--cCCCC--------------chHHh
Q psy5277 46 DWKDLNLKFIVSIYRDYALHKDIRFLTR-VYPTCLELIRKCESFD-KQGLGIVQ--NGGFP--------------DQTAY 107 (314)
Q Consensus 46 ~w~D~~~~fi~~~~~y~~~TgD~~fl~~-~~p~vk~al~~~~~~d-~d~dGL~~--~~g~~--------------d~t~~ 107 (314)
.|.-.+.|....+|+||++|||.+||++ .||.|+.+.+|..++- .+++|-.. ++-.+ +..++
T Consensus 445 ~w~~~~awla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~~sPE~~~~~~g~~~~~~~n~ty 524 (803)
T 2rdy_A 445 FWPMGGVWLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPSTSPEQRFRIGEKGYAVSSATTM 524 (803)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSBCBTTBCEEETTEEECCBSCCHH
T ss_pred cccchHHHHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCCCcccccccCCCcccccccChHH
Confidence 4433445688999999999999999999 7999999999998832 23355322 11001 11289
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcH-HHHHHHHHHHHHH
Q psy5277 108 CGGLHIAALACMVEMSSLLNDTQ-QQQQFSAKLTKAS 143 (314)
Q Consensus 108 ~~al~y~AL~~~a~lA~~lG~~~-~a~~~~~~a~~~k 143 (314)
.++++...|+.++++++.||.++ +.++|++.++++.
T Consensus 525 tn~~~~~~l~~a~~a~~~Lg~~~~~~~~w~~~~~~L~ 561 (803)
T 2rdy_A 525 DLSLIAECFDNCIQAAKRLSIDEDFVKALSDAKQRLL 561 (803)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHhcCC
Confidence 99999999999999999999654 4677777666654
No 19
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=97.15 E-value=0.00046 Score=71.74 Aligned_cols=80 Identities=21% Similarity=0.235 Sum_probs=61.4
Q ss_pred ccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-h-CCCC---CcccccCC--------C-CchHHhHHHHHHH
Q psy5277 49 DLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCES-F-DKQG---LGIVQNGG--------F-PDQTAYCGGLHIA 114 (314)
Q Consensus 49 D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~-~-d~d~---dGL~~~~g--------~-~d~t~~~~al~y~ 114 (314)
-.+.|....+|+||++|||.+||++.||.|+.+.+|..+ + ..++ +|-..... . .+..++.+.+...
T Consensus 506 ~~~aWla~~lweyy~yTgD~~fL~~~yPlLkeaA~F~~d~~l~~~~~~~~G~~vi~ps~SPE~~~~~~~~~tydn~l~~~ 585 (899)
T 2eab_A 506 AAVPWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGSSSGDRLTTGVAYSPEQGPLGTDGNTYESSLVWQ 585 (899)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCEECCGGGCSSEECSEEEETTEEEEEEECCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhheEecCcCCCCeEEEccccCCCCCCCCCCCcHHHHHHHHH
Confidence 334668999999999999999998789999999999988 4 1244 45433110 0 1112789999889
Q ss_pred HHHHHHHHHHHcCC
Q psy5277 115 ALACMVEMSSLLND 128 (314)
Q Consensus 115 AL~~~a~lA~~lG~ 128 (314)
.|+.++++++.||.
T Consensus 586 ll~~~i~aa~~Lg~ 599 (899)
T 2eab_A 586 MLNDAIEAAKAKGD 599 (899)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999986
No 20
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=96.67 E-value=0.0024 Score=65.35 Aligned_cols=92 Identities=12% Similarity=0.054 Sum_probs=66.1
Q ss_pred hhHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHHHhhC-C-CCCcccc---cCC---CC---chHHhHHHHHHHHHHHH
Q psy5277 52 LKFIVSIYRDYALHKDIRFLTR-VYPTCLELIRKCESFD-K-QGLGIVQ---NGG---FP---DQTAYCGGLHIAALACM 119 (314)
Q Consensus 52 ~~fi~~~~~y~~~TgD~~fl~~-~~p~vk~al~~~~~~d-~-d~dGL~~---~~g---~~---d~t~~~~al~y~AL~~~ 119 (314)
.+..+++++||+.|||.+||++ .+|.|+.+.+|..++- . +.+|-.. ..| +. +..+|+|.+....|+.+
T Consensus 430 a~ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdEy~e~v~nn~ytn~~a~~~l~~a 509 (754)
T 1h54_A 430 GDIAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYENNVDNNWDTNMLAQWTLKYT 509 (754)
T ss_dssp HHHHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSSTTSCSBSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHhCChHHHHHHHHHHHHheEEeCCCCEEEEccccCcccccCCCCCcHHHHHHHHHHHHHH
Confidence 4478889999999999999986 6999999999998831 1 2334321 112 11 22279999999999999
Q ss_pred HHHH--------HHcCCc-HHHHHHHHHHHHHH
Q psy5277 120 VEMS--------SLLNDT-QQQQQFSAKLTKAS 143 (314)
Q Consensus 120 a~lA--------~~lG~~-~~a~~~~~~a~~~k 143 (314)
.+++ +.||.+ +..++|++.++++.
T Consensus 510 ~~~~~~l~~~~~~~lg~~~~~~~~w~~i~~~l~ 542 (754)
T 1h54_A 510 LEILGKVDQDTAKQLDVSDEEKTKWQDIVDRMY 542 (754)
T ss_dssp HHHHTTSCHHHHHHHCCCHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHhCCC
Confidence 9988 778854 35677777665554
No 21
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.64 E-value=0.096 Score=48.60 Aligned_cols=94 Identities=9% Similarity=-0.085 Sum_probs=55.8
Q ss_pred ccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCcccccCCC---CchHHhHHHHHHHHHHHHHHHHHH
Q psy5277 49 DLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGLGIVQNGGF---PDQTAYCGGLHIAALACMVEMSSL 125 (314)
Q Consensus 49 D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~~g~---~d~t~~~~al~y~AL~~~a~lA~~ 125 (314)
..+.+.|.++.++|+.|||.++++ ..++.++++.++-.+++|+...... .......++ .++.++.++++.
T Consensus 115 ~~~af~i~al~~~y~~tg~~~~l~----~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~~~~~~---~~~~all~l~~~ 187 (388)
T 2gz6_A 115 FSDCFAAMAFSQYALASGEEWAKD----VAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKALAVPM---ILANLTLEMEWL 187 (388)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHTC--------------CCCCEETHHHH---HHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHH----HHHHHHHHHHHHhcCCCcccCcccCCCCCCCCCCHHH---HHHHHHHHHHHH
Confidence 356678999999999999998775 4566677776642244466443210 001012233 234445556666
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhCcCc
Q psy5277 126 LNDTQQQQQFSAKLTKASQVYHDLLWTG 153 (314)
Q Consensus 126 lG~~~~a~~~~~~a~~~k~~~~~~lW~~ 153 (314)
.|+ .+|.+.|+++.+.+.++|++.
T Consensus 188 t~d----~~~~~~A~~~~~~~~~~~~~~ 211 (388)
T 2gz6_A 188 LPQ----ETLENVLAATVQEVMGDFLDQ 211 (388)
T ss_dssp SCH----HHHHHHHHHHHHHHHHTTEET
T ss_pred cCC----HHHHHHHHHHHHHHHHHHhcc
Confidence 664 479999999999999999973
No 22
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=93.44 E-value=0.33 Score=44.86 Aligned_cols=92 Identities=17% Similarity=0.240 Sum_probs=65.0
Q ss_pred cChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCcccccC------CCCc---hHHhHHHHHHHHHHHHH
Q psy5277 50 LNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGLGIVQNG------GFPD---QTAYCGGLHIAALACMV 120 (314)
Q Consensus 50 ~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~~------g~~d---~t~~~~al~y~AL~~~a 120 (314)
.+..++..+.+.++.|||.++++ ..+++.+|+.++-.|++|++..+ +..+ +.+|.++.++ ..++
T Consensus 151 sN~~~~~~la~l~~~tgd~~Yl~----~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l---~g~~ 223 (349)
T 3k7x_A 151 VNAPFIILSCWLYNELNETKYLE----WAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYI---GANL 223 (349)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHH---HHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHH----HHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHH---HHHH
Confidence 46668899999999999987665 67888888877434555666521 2111 1278888755 4555
Q ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcC
Q psy5277 121 EMSSLLNDTQQQQQFSAKLTKASQVYHDLLWT 152 (314)
Q Consensus 121 ~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~ 152 (314)
+|.+.-|++ +|.+.|+++.+.+.+.|+.
T Consensus 224 ~LY~~T~d~----~yl~~a~~l~~~~~~~f~~ 251 (349)
T 3k7x_A 224 ELYRITKEA----IYLDTANKTAAISLKELTE 251 (349)
T ss_dssp HHHHHHCCH----HHHHHHHHHHHHHHHHHEE
T ss_pred HHHHhhCcH----HHHHHHHHHHHHHHHHhcc
Confidence 666666764 6889999999988888874
No 23
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=91.77 E-value=1.8 Score=40.31 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=66.3
Q ss_pred cCCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCcccccC-C-------CCchHHhHHHHHHH
Q psy5277 43 DVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGLGIVQNG-G-------FPDQTAYCGGLHIA 114 (314)
Q Consensus 43 D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~~-g-------~~d~t~~~~al~y~ 114 (314)
|.+.|.=.+.|+|+++-..|+.|+|.++|+ ..++..+++.++ ..++|.+.-. . +.| +.-+++
T Consensus 215 dds~WaRGqAw~i~gl~~ly~~T~d~~yL~----~A~~la~~~l~~-~~~d~~pywd~~~~~~~~~~~d--~Sa~ai--- 284 (377)
T 2ahf_A 215 DGSTWTRGQAWGIYGFALNSRYLGNADLLE----TAKRMARHFLAR-VPEDGVVYWDFEVPQEPSSYRD--SSASAI--- 284 (377)
T ss_dssp TTSCBHHHHHHHHHHHHHHHHHHTCHHHHH----HHHHHHHHHHTT-CCTTSSCBSBTTSCCCTTSCBC--HHHHHH---
T ss_pred CcchhHHHHHHHHHHHHHHHHHHCChHHHH----HHHHHHHHHHHh-hHHhCCcccccCCCccCCCccC--CCHHHH---
Confidence 446666667889999999999999999886 556777888776 3556664311 0 112 223333
Q ss_pred HHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHhCc
Q psy5277 115 ALACMVEMSSLLN-DTQQQQQFSAKLTKASQVYHDLLW 151 (314)
Q Consensus 115 AL~~~a~lA~~lG-~~~~a~~~~~~a~~~k~~~~~~lW 151 (314)
+...+.+|++.++ ++...++|++.|+++-+++.+.+.
T Consensus 285 aA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~ 322 (377)
T 2ahf_A 285 TACGLLEIASQLDESDPERQRFIDAAKTTVTALRDGYA 322 (377)
T ss_dssp HHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHh
Confidence 3345556666676 333457899999999999877643
No 24
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=91.37 E-value=0.99 Score=42.41 Aligned_cols=98 Identities=13% Similarity=0.026 Sum_probs=65.5
Q ss_pred ccCCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-C-------CCCchHHhHHHHHH
Q psy5277 42 FDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGLGIVQN-G-------GFPDQTAYCGGLHI 113 (314)
Q Consensus 42 ~D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~-~-------g~~d~t~~~~al~y 113 (314)
.|.+.|.=.+.|+|+++-..|+.|||.++|+.. ++..+++.++ ..++|.+.- . .+.| +--+++
T Consensus 239 ~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A----~~la~~~l~~-~~~d~~pywdt~~~~~~~~~~D--~Sa~ai-- 309 (397)
T 2zzr_A 239 SDESSWARGQAWGIYGIPLSYRKMKDYQQIILF----KGMTNYFLNR-LPEDKVSYWDLIFTDGSGQPRD--TSATAT-- 309 (397)
T ss_dssp STTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHH----HHHHHHHHHT-CCTTSCCBSBTTCCTTSCCCBC--HHHHHH--
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHH----HHHHHHHHHh-hHHhCCccccCCCCCCCCCcCC--CCHHHH--
Confidence 455567777788999999999999999999754 6777777775 345565331 1 1123 233333
Q ss_pred HHHHHHHHHHHHcCCcHHHHH--HHHHHHHHHHHHHHhC
Q psy5277 114 AALACMVEMSSLLNDTQQQQQ--FSAKLTKASQVYHDLL 150 (314)
Q Consensus 114 ~AL~~~a~lA~~lG~~~~a~~--~~~~a~~~k~~~~~~l 150 (314)
+...+.+|++.+|+.. .++ |++.|+++-+++....
T Consensus 310 -aA~~Ll~L~~~~~~~~-~~~~~Y~~~A~~~l~~l~~~y 346 (397)
T 2zzr_A 310 -AVCGIHEMLKYLPEVD-PDKETYKYAMHTMLRSLIEQY 346 (397)
T ss_dssp -HHHHHHHHHTTSCTTC-TTHHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHhcCccc-hhhHHHHHHHHHHHHHHHHHH
Confidence 3345566777777521 234 9999999999888764
No 25
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=88.69 E-value=3.2 Score=38.09 Aligned_cols=132 Identities=7% Similarity=-0.148 Sum_probs=75.7
Q ss_pred hhHHHHHHhhhhccc-cccc-CC-CCCCcccCCCccccccCCcccccChhHHHHHHHHHHH-hCCHHHHHHHHHHHHHHH
Q psy5277 7 MGEVKFRSAANTHER-YYTR-WF-PEEEPFSLINGYNVFDVSDWKDLNLKFIVSIYRDYAL-HKDIRFLTRVYPTCLELI 82 (314)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~-g~-p~~~p~~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~-TgD~~fl~~~~p~vk~al 82 (314)
++..+...+|+-+.+ ..|. |- -....... .-.+|. .-...+...|.+.-+-|+. |||.++++ .+++++
T Consensus 12 ~~~~l~~~~l~fw~~~~~D~~GGf~~~~~~d~--~~~~~e--K~l~~nar~i~~~a~a~~~~~~~~~~~~----~A~~~~ 83 (388)
T 2gz6_A 12 YKNALLNDVLPFWENHSLDSEGGYFTCLDRQG--KVYDTD--KFIWLQNRQVWTFSMLCNQLEKRENWLK----IARNGA 83 (388)
T ss_dssp HHHHHHHTHHHHHHHHCBCTTSSBCCEEBTTS--CEEECC--EEHHHHHHHHHHHHHHHHHTCCCHHHHH----HHHHHH
T ss_pred HHHHHHHhHHHHHHhcCCCCCCCEEeEECCCC--CcCCcc--hhHHHHHHHHHHHHHHHHHhcCCHHHHH----HHHHHH
Confidence 456677778887733 3443 11 12211111 112222 2233566677888888888 89987765 678999
Q ss_pred HHHHhhCCCCC-ccccc---CCC-Cc--hHHhHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcCc
Q psy5277 83 RKCESFDKQGL-GIVQN---GGF-PD--QTAYCGGLHIAALACMVEMSSLLNDTQQQQQFSAKLTKASQVYHDLLWTG 153 (314)
Q Consensus 83 ~~~~~~d~d~d-GL~~~---~g~-~d--~t~~~~al~y~AL~~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~~ 153 (314)
+|+.+...+++ |+... .|. .+ ...+.+++++.|| +++++..|++ +|.+.|+++.+.+.+++|++
T Consensus 84 ~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al---~~~y~~tg~~----~~l~~A~~~~~~i~~~~~d~ 154 (388)
T 2gz6_A 84 KFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAF---SQYALASGEE----WAKDVAMQAYNNVLRRKDNP 154 (388)
T ss_dssp HHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHH---HHHHHHHCCH----HHHHHHHHHHHHHHTC----
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHH---HHHHHHhCCH----HHHHHHHHHHHHHHHHhcCC
Confidence 99988433333 33321 111 11 1157777665544 5566667876 67888999999999888863
No 26
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=88.52 E-value=1.8 Score=39.83 Aligned_cols=101 Identities=15% Similarity=0.086 Sum_probs=67.6
Q ss_pred cccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-Hh-hCCC-CCcccccCCC--CchHHhHHHHHHHHHHHHHHH
Q psy5277 48 KDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKC-ES-FDKQ-GLGIVQNGGF--PDQTAYCGGLHIAALACMVEM 122 (314)
Q Consensus 48 ~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~-~~-~d~d-~dGL~~~~g~--~d~t~~~~al~y~AL~~~a~l 122 (314)
.|+..++++++-+-|+.|||.++|+ ..++..+++ .. ++.. +-|+...... .++ +..|++.. ..++.+
T Consensus 91 ~DD~a~~~la~~~aye~t~~~~yL~----~A~~l~~~l~~~~wd~~~gGGi~W~~~~~~~kn-aisN~~~~---~~la~l 162 (349)
T 3k7x_A 91 YDDMLWNALAAYRLYKATGKSIYLE----DAQLVWQDLVDTGWNDIMGGGFAWRRPQMYYKN-TPVNAPFI---ILSCWL 162 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHHHTBCSGGGSCBEEETTEEEEEE-HHHHHHHH---HHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCchHHH----HHHHHHHHHHHhCCCCCCCCceEecCCCccccc-hhhHHHHH---HHHHHH
Confidence 4566669999999999999998886 445666776 34 4422 2344433210 123 45777655 455777
Q ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhCcCcceeeecC
Q psy5277 123 SSLLNDTQQQQQFSAKLTKASQVYHDLLWTGSYYKFDS 160 (314)
Q Consensus 123 A~~lG~~~~a~~~~~~a~~~k~~~~~~lW~~~~~~~d~ 160 (314)
++..|++ +|.+.|+++-+-+.+.|.++.+..+|.
T Consensus 163 ~~~tgd~----~Yl~~A~~~~~w~~~~l~d~~g~v~Dg 196 (349)
T 3k7x_A 163 YNELNET----KYLEWAMKTYEWQTKVLVREDGFVEDG 196 (349)
T ss_dssp HHHHCCH----HHHHHHHHHHHHHHHHHBCTTSCBCCE
T ss_pred HHHhCCH----HHHHHHHHHHHHHHhcCCCCCCeEecC
Confidence 8888876 688888888888888899866433554
No 27
>2wvx_A Mannosidase, putative alpha-1,2-mannosidase; glycoside hydrolase family 92, GH92, hydrolase, BT3990; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvz_A* 2ww0_A* 2ww1_A* 2ww3_A* 2wvx_B* 2wzs_A*
Probab=83.60 E-value=1.2 Score=45.16 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=33.3
Q ss_pred HCCChHHHHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCchhhhHHHHHHHHH
Q psy5277 252 YEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGDKTYRSGGYMRALAVYAMQDAY 308 (314)
Q Consensus 252 ~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~g~~~~~~Y~r~~~~w~~~~al 308 (314)
..|...++-++++.+++.. |. ..|.+++||.. .-+|++|-|..||
T Consensus 594 yaG~PwkTq~~vr~i~~~~---y~---~~p~GlpGneD------~GqMSAWyVfsal 638 (744)
T 2wvx_A 594 YAGQPWKAQYWLRQVMDRM---YT---PGPDGYCGDED------NGQTSAWYVFSAL 638 (744)
T ss_dssp GGTCHHHHHHHHHHHHHHS---BC---SSTTCBSSCCT------TTHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHHHh---cC---CCCCCcCCccc------ccHHHHHHHHHHh
Confidence 3488888888877777665 33 47888887733 2389999999887
No 28
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=81.96 E-value=11 Score=34.91 Aligned_cols=92 Identities=11% Similarity=0.088 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCcccccC---CCC-chH--HhHHHHHHHHHHHHHHHHHHc
Q psy5277 55 IVSIYRDYALHKDIRFLTRVYPTCLELIRKCES--FDKQGLGIVQNG---GFP-DQT--AYCGGLHIAALACMVEMSSLL 126 (314)
Q Consensus 55 i~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~--~d~d~dGL~~~~---g~~-d~t--~~~~al~y~AL~~~a~lA~~l 126 (314)
.+.+.+.++.+||...++ ..+++.++..+ +|.+.-|++... +.+ +.+ ..+++ .++.++..+++..
T Consensus 254 awlLl~~~~~~~~~~~~~----~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qa---Eal~a~l~ly~~t 326 (402)
T 3gt5_A 254 AKLLLILDRYIEVEWLVP----VARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQA---ESLAAAALLATRS 326 (402)
T ss_dssp HHHHHHHHHHCCCTTHHH----HHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCcHHHHH----HHHHHHHHHHHhcccCCCCcEEEEEcCCCCeeeCCcceeHHH---HHHHHHHHHHHHh
Confidence 445667778899976554 55666666655 554444665422 111 000 34554 4666677788888
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHhCcC---cceee
Q psy5277 127 NDTQQQQQFSAKLTKASQVYHDLLWT---GSYYK 157 (314)
Q Consensus 127 G~~~~a~~~~~~a~~~k~~~~~~lW~---~~~~~ 157 (314)
|++ +|.+.++++-+-+.++|+| |+||.
T Consensus 327 gd~----~yl~~a~~~~~~~~~~~~D~~~G~W~~ 356 (402)
T 3gt5_A 327 GDE----RYWQWYDRLWAYAWQHMVDHRYGAWYR 356 (402)
T ss_dssp CCH----HHHHHHHHHHHHHHHHTBCTTTCSBCS
T ss_pred CCH----HHHHHHHHHHHHHHHhCcCCCCCeEEE
Confidence 875 5888888898888999997 55665
No 29
>2ww2_A Mannosidase, alpha-1,2-mannosidase; hydrolase, glycoside hydrolase family 92, BT2199; HET: SWA; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvy_A*
Probab=80.29 E-value=1 Score=45.70 Aligned_cols=45 Identities=13% Similarity=0.185 Sum_probs=33.1
Q ss_pred HCCChHHHHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCchhhhHHHHHHHHH
Q psy5277 252 YEGNVDEAWTTAGGLYRTVYERTGLGFETPEGLTGDKTYRSGGYMRALAVYAMQDAY 308 (314)
Q Consensus 252 ~~G~~~~A~~l~~~~~~~~~~~~g~~~~~PE~~~~~g~~~~~~Y~r~~~~w~~~~al 308 (314)
..|...++-++++.+++.. |. ..|.+++||.. . -+|++|-|..||
T Consensus 596 yaG~PwkTq~~vr~i~~~~---y~---~~p~GlpGneD--~----G~MSAWyVfsal 640 (737)
T 2ww2_A 596 YIGQPWKTQYHLRNVMDKL---YN---SGSKGYCGDED--N----GQTSAWYVFSAM 640 (737)
T ss_dssp GTTCHHHHHHHHHHHHHHS---BC---SSTTCBCSTTC--S----STTHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHHHh---cC---CCCCCCCCccc--c----cHHHHHHHHHHh
Confidence 4488888888877777665 33 47888887733 2 289999999887
No 30
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=79.66 E-value=14 Score=33.86 Aligned_cols=93 Identities=11% Similarity=0.103 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-Hh--hCCCCCccccc---CCC-Cc----hH--HhHHHHHHHHHHHHH
Q psy5277 54 FIVSIYRDYALHKDIRFLTRVYPTCLELIRKC-ES--FDKQGLGIVQN---GGF-PD----QT--AYCGGLHIAALACMV 120 (314)
Q Consensus 54 fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~-~~--~d~d~dGL~~~---~g~-~d----~t--~~~~al~y~AL~~~a 120 (314)
..+.+.+.++.+||.++++ ..+++.+++ .+ ++.+..|++.. .|. .. .. ...++ .++.+++
T Consensus 252 ~~wlL~~a~~~~~~~~~l~----~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qa---ea~~a~l 324 (402)
T 1fp3_A 252 AGWFLLRHSSRSGDAKLRA----HVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHS---EAMIAFL 324 (402)
T ss_dssp HHHHHHHHHHHTTCHHHHH----HHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHH----HHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHH---HHHHHHH
Confidence 3345777888999997766 467777777 55 44332466532 121 11 10 23443 4566677
Q ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcC---cceee
Q psy5277 121 EMSSLLNDTQQQQQFSAKLTKASQVYHDLLWT---GSYYK 157 (314)
Q Consensus 121 ~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~---~~~~~ 157 (314)
.+.+..|++ +|.+.|+++.+.+.++|+| |.||.
T Consensus 325 ~ly~~tgd~----~yl~~a~~~~~~~~~~f~D~~~G~w~~ 360 (402)
T 1fp3_A 325 MGYSESGDP----ALLRLFYQVAEYTFRQFRDPEYGEWFG 360 (402)
T ss_dssp HHHHHHCCH----HHHHHHHHHHHHHHHHTBCTTTSSBCC
T ss_pred HHHHHhCCH----HHHHHHHHHHHHHHHhCcCCCCCceEe
Confidence 777777875 6888899999999999997 45655
No 31
>2xsg_A Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {Cellulosimicrobium cellulans}
Probab=78.05 E-value=2.1 Score=43.53 Aligned_cols=37 Identities=5% Similarity=-0.083 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHH-HHHHHHHHHh
Q psy5277 113 IAALACMVEMSSLLNDTQQQQQFSAKL-TKASQVYHDL 149 (314)
Q Consensus 113 y~AL~~~a~lA~~lG~~~~a~~~~~~a-~~~k~~~~~~ 149 (314)
...=-|.++||+.||+++++++|.+++ .-=|.-|+..
T Consensus 462 aydD~~iaq~Ak~LGk~~d~~~y~~Rs~~ny~nlfd~~ 499 (774)
T 2xsg_A 462 GYDQYGLSVIADELGLTEEAETLREQASWPIEKLTKPG 499 (774)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhHHHhCCch
Confidence 345568899999999998888998877 6655555444
No 32
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=77.99 E-value=9.6 Score=35.32 Aligned_cols=91 Identities=12% Similarity=0.180 Sum_probs=58.5
Q ss_pred ChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCC--cccc--cCCCC-chH--HhHHHHHHHHHHHHHHHH
Q psy5277 51 NLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGL--GIVQ--NGGFP-DQT--AYCGGLHIAALACMVEMS 123 (314)
Q Consensus 51 ~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~d--GL~~--~~g~~-d~t--~~~~al~y~AL~~~a~lA 123 (314)
+..+|.+..+-|+.+|+.++++ .++++++|+.+.-.|++ |+.. ..|.+ +.+ .+-.+..+.||.. +
T Consensus 54 n~r~i~~~a~a~~~~g~~~~l~----~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~----~ 125 (402)
T 3gt5_A 54 STRFVFNYAMAYLQFGTAEYLD----AVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC----G 125 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH----H
T ss_pred HHHHHHHHHHHHHhhCChHHHH----HHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH----H
Confidence 4556777777788899987764 66899999988433433 3322 11211 111 5666655555444 3
Q ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHhCcCc
Q psy5277 124 SLLNDTQQQQQFSAKLTKASQVYHDLLWTG 153 (314)
Q Consensus 124 ~~lG~~~~a~~~~~~a~~~k~~~~~~lW~~ 153 (314)
...|++ +|.+.|+++.+.+.++|||.
T Consensus 126 ~~tgd~----~~l~~A~~l~~~i~~~f~d~ 151 (402)
T 3gt5_A 126 LKVGIK----QAREWMDETWCLLERHFWDA 151 (402)
T ss_dssp HHTTCT----THHHHHHHHHHHHHHHTEET
T ss_pred HHhCCh----hHHHHHHHHHHHHHHHhcCC
Confidence 346766 47788899999999999974
No 33
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=77.78 E-value=9.6 Score=36.20 Aligned_cols=106 Identities=9% Similarity=0.099 Sum_probs=64.4
Q ss_pred cccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhC-CCCCcccccCC-CCchHHhHHHHHHHHHHHHHHHHHH
Q psy5277 48 KDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFD-KQGLGIVQNGG-FPDQTAYCGGLHIAALACMVEMSSL 125 (314)
Q Consensus 48 ~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d-~d~dGL~~~~g-~~d~t~~~~al~y~AL~~~a~lA~~ 125 (314)
.|+.-.+++++++-|+.|+|.+++ +.+.+..+|+++.- ..++|-+.... ...+ ..+=+++ .++-.++.+++.
T Consensus 144 LDD~g~~~~~Li~lY~~T~d~~yl----~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q-~WiD~ly-M~~pfla~~~~~ 217 (445)
T 3k11_A 144 LDDAGAVCTAMIKLRLKDESLPVD----GLIQNYFDFIINKEYRLADGTFARNRPQRNT-LWLDDMF-MGIPAVAQMSRY 217 (445)
T ss_dssp GGGTHHHHHHHHHHHHHCTTCCCH----HHHHHHHHHHHHTSCBCTTCCBCBCSSSTTE-EETHHHH-HHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhcCCHHHH----HHHHHHHHHHHHcCCCCCCCceeecCCCCCc-eEecchh-hHHHHHHHHHHH
Confidence 444555899999999999998655 47788889988732 24455555432 1223 3344443 566777888899
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhCcC---cceee-ecCC
Q psy5277 126 LNDTQQQQQFSAKLTKASQVYHDLLWT---GSYYK-FDSS 161 (314)
Q Consensus 126 lG~~~~a~~~~~~a~~~k~~~~~~lW~---~~~~~-~d~~ 161 (314)
.|+++ ..|.+.|.+--..+.+.++| |.+|. +|..
T Consensus 218 tgd~~--~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~~ 255 (445)
T 3k11_A 218 DKEAK--NKYLAEAVKQFLQFADRMFIPEKGLYRHGWVES 255 (445)
T ss_dssp CGGGH--HHHHHHHHHHHHHHHHHHEETTTTEECSEEETT
T ss_pred HCCcc--hHHHHHHHHHHHHHHHhcccCCCCCEeeeecCC
Confidence 99874 11333333333344456786 34554 6543
No 34
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=76.14 E-value=31 Score=32.16 Aligned_cols=107 Identities=14% Similarity=0.096 Sum_probs=63.9
Q ss_pred CCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh----------hCCCCCcccc----cCCCCchH--Hh
Q psy5277 44 VSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCES----------FDKQGLGIVQ----NGGFPDQT--AY 107 (314)
Q Consensus 44 ~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~----------~d~d~dGL~~----~~g~~d~t--~~ 107 (314)
...|.|..+ -|.+++.-.+.+||.++++.--.+....++.+.+ +| ..+|.+. ..|..|.+ +=
T Consensus 169 ~~~iID~~m-ni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d-~~~G~~~~~~t~qGy~dds~WaR 246 (397)
T 2zzr_A 169 YRLIIDCLL-NIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFD-PETGEPLKGVTRQGYSDESSWAR 246 (397)
T ss_dssp CEEETTHHH-HTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEEC-TTTCCEEEEECTTSSSTTSCBHH
T ss_pred CceeechHh-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEee-CCCCCcccCCcccccCcchhhHH
Confidence 456666655 6888888899999999887554444444444321 11 1246553 22322210 22
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcC-cc-eeeec
Q psy5277 108 CGGLHIAALACMVEMSSLLNDTQQQQQFSAKLTKASQVYHDLLWT-GS-YYKFD 159 (314)
Q Consensus 108 ~~al~y~AL~~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~-~~-~~~~d 159 (314)
-+|.. +...+++.+..|++ +|.+.|+++.+.+.++|.. +. ||+++
T Consensus 247 GqAw~---i~gl~~lY~~T~d~----~yL~~A~~la~~~l~~~~~d~~pywdt~ 293 (397)
T 2zzr_A 247 GQAWG---IYGIPLSYRKMKDY----QQIILFKGMTNYFLNRLPEDKVSYWDLI 293 (397)
T ss_dssp HHHHH---HHHHHHHHHHHCCH----HHHHHHHHHHHHHHHTCCTTSCCBSBTT
T ss_pred HHHHH---HHHHHHHHHHHCCH----HHHHHHHHHHHHHHHhhHHhCCccccCC
Confidence 34433 34455556667765 6888899999999998864 32 66643
No 35
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=71.66 E-value=24 Score=32.52 Aligned_cols=102 Identities=12% Similarity=0.141 Sum_probs=61.9
Q ss_pred CCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCcccccC----CC-----CchHHhHHHHHHH
Q psy5277 44 VSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGLGIVQNG----GF-----PDQTAYCGGLHIA 114 (314)
Q Consensus 44 ~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~~----g~-----~d~t~~~~al~y~ 114 (314)
...|.|....-+..+.++++.|||.+++++..-.+....+++ +| .++||..+. +. .-| +--|+.+..
T Consensus 165 ~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l--~D-~~tGl~~h~~~~~~~~~~~~~~W-aRG~gW~~~ 240 (382)
T 3pmm_A 165 QQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNL--MD-RETGLWFHGWNYEGRHNFARARW-ARGNSWLTM 240 (382)
T ss_dssp TEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--BC-TTTSCBCSEEETTTTBCTTCCCB-HHHHHHHHH
T ss_pred CcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHc--cC-CCCCCeeeeccCCCCCCCCccee-cccccHHHH
Confidence 367888655556677889999999998887766666655543 22 357888753 10 112 455666655
Q ss_pred HHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHhC
Q psy5277 115 ALACMVEMSSLLN-DTQQQQQFSAKLTKASQVYHDLL 150 (314)
Q Consensus 115 AL~~~a~lA~~lG-~~~~a~~~~~~a~~~k~~~~~~l 150 (314)
++-...+... +- +...-+++.+.++++.+++.+..
T Consensus 241 gl~~~l~~l~-~p~~~~~~~~~~~~~~~~a~~~~~~q 276 (382)
T 3pmm_A 241 VIPDFLELVD-LPEGNAVRRYLITVLDAQIAALAECQ 276 (382)
T ss_dssp HHHHHHHHHC-CCTTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhc-CCcchhhHHHHHHHHHHHHHHHHHcC
Confidence 5554444321 21 11234567777777777776653
No 36
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=67.55 E-value=26 Score=32.33 Aligned_cols=106 Identities=15% Similarity=0.102 Sum_probs=63.2
Q ss_pred CcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh----------hCCCCCcccc----cCCCCchH--HhH
Q psy5277 45 SDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCES----------FDKQGLGIVQ----NGGFPDQT--AYC 108 (314)
Q Consensus 45 ~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~----------~d~d~dGL~~----~~g~~d~t--~~~ 108 (314)
..|.|..+ -|.+++.-++.|||.++++.--.++...++.+.+ +| ..+|.+. ..|..|.. +=-
T Consensus 145 ~~iID~mm-ni~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D-~~tG~~~~~~t~qG~~dds~WaRG 222 (377)
T 2ahf_A 145 RIIIDCLL-NLPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFD-PENGNAIRGGTHQGNTDGSTWTRG 222 (377)
T ss_dssp EEEGGGGG-GHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEEC-TTTCCEEEEECSSSSSTTSCBHHH
T ss_pred eEEechHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEee-CCCCCeeeCCCcCCcCCcchhHHH
Confidence 45555544 4889999999999999887655555555554422 11 1266662 33322211 223
Q ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcC-cc-eeeec
Q psy5277 109 GGLHIAALACMVEMSSLLNDTQQQQQFSAKLTKASQVYHDLLWT-GS-YYKFD 159 (314)
Q Consensus 109 ~al~y~AL~~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~-~~-~~~~d 159 (314)
+|..+ .....+.+..+++ +|.+.|+++.+.+.++|.. +. |++++
T Consensus 223 qAw~i---~gl~~ly~~T~d~----~yL~~A~~la~~~l~~~~~d~~pywd~~ 268 (377)
T 2ahf_A 223 QAWGI---YGFALNSRYLGNA----DLLETAKRMARHFLARVPEDGVVYWDFE 268 (377)
T ss_dssp HHHHH---HHHHHHHHHHTCH----HHHHHHHHHHHHHHTTCCTTSSCBSBTT
T ss_pred HHHHH---HHHHHHHHHHCCh----HHHHHHHHHHHHHHHhhHHhCCcccccC
Confidence 44333 3444455556664 6888999999999988853 32 66543
No 37
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=66.51 E-value=57 Score=30.16 Aligned_cols=93 Identities=13% Similarity=0.045 Sum_probs=55.8
Q ss_pred HHHHHHHHHHh---CC--HHHHHHHHHHHHHHHHHHHh--hCCC-CCcccccCC---C-CchH--HhHHHHHHHHHHHHH
Q psy5277 55 IVSIYRDYALH---KD--IRFLTRVYPTCLELIRKCES--FDKQ-GLGIVQNGG---F-PDQT--AYCGGLHIAALACMV 120 (314)
Q Consensus 55 i~~~~~y~~~T---gD--~~fl~~~~p~vk~al~~~~~--~d~d-~dGL~~~~g---~-~d~t--~~~~al~y~AL~~~a 120 (314)
++.+.+.++.+ || .. ++.+..++..+++.+ +|.+ ..|++.... . .+.. ...++ .++.++.
T Consensus 253 ~wlLl~~~~~~~~~~~~~~~---~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~a---ea~~all 326 (421)
T 2zbl_A 253 GRLMLHLHAALEARFETPPA---WLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIV---EAMGTAY 326 (421)
T ss_dssp HHHHHHHHHHHHHTTCCCCT---HHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHcccccccchH---HHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHH---HHHHHHH
Confidence 44556666666 55 31 334466666777655 4444 347765321 0 1100 34454 3556666
Q ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcC---cceee
Q psy5277 121 EMSSLLNDTQQQQQFSAKLTKASQVYHDLLWT---GSYYK 157 (314)
Q Consensus 121 ~lA~~lG~~~~a~~~~~~a~~~k~~~~~~lW~---~~~~~ 157 (314)
.+++..|++ +|.+.++++-+.+.++|.+ |+||.
T Consensus 327 ~l~~~tgd~----~yl~~a~~~~~~~~~~~~d~~~G~w~~ 362 (421)
T 2zbl_A 327 ALYTLTDDS----QYEEWYQKWWDYCIKYLMDYENGSWWQ 362 (421)
T ss_dssp HHHHHHCCH----HHHHHHHHHHHHHHHHTBCTTTSSBCS
T ss_pred HHHHHhCCH----HHHHHHHHHHHHHHHhCCCCCCCeeEe
Confidence 677777875 6788889999999999997 55655
No 38
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=66.16 E-value=22 Score=32.47 Aligned_cols=98 Identities=15% Similarity=0.265 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCcccccCC-CCchHHhHHHHHHHHHHHHHHHHHHcCCcHHH
Q psy5277 54 FIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGLGIVQNGG-FPDQTAYCGGLHIAALACMVEMSSLLNDTQQQ 132 (314)
Q Consensus 54 fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~~g-~~d~t~~~~al~y~AL~~~a~lA~~lG~~~~a 132 (314)
+..++...|+.|||.++++ .+++..+++..+-..++|-..... ...+ ..+=+++ -++-.++.+++..|++
T Consensus 92 ~g~~ll~lY~~Tgd~~yl~----~a~~la~~l~~~~r~~~G~fw~~~~~~~~-~w~D~l~-m~~p~L~~l~~~tgd~--- 162 (373)
T 1nc5_A 92 AGLILFPLYEQTKDERYVK----AAKRLRSLYGTLNRTSEGGFWHKDGYPYQ-MWLDGLY-MGGPFALKYANLKQET--- 162 (373)
T ss_dssp GGGGHHHHHHHHCCHHHHH----HHHHHHGGGGTSCBCTTSCBCSCTTSTTE-EETHHHH-HHHHHHHHHHHHHTCT---
T ss_pred HHHHHHHHHHHhCCHHHHH----HHHHHHHHHHhccCCCCCCeeccCCCCCe-EEeCcHH-HHHHHHHHHHHHHCCH---
Confidence 4456677788999987654 456666666443223445444321 1122 2232332 4455678888999987
Q ss_pred HHHHHHHHHHHHHHHHhCcC---cceee-ecCC
Q psy5277 133 QQFSAKLTKASQVYHDLLWT---GSYYK-FDSS 161 (314)
Q Consensus 133 ~~~~~~a~~~k~~~~~~lW~---~~~~~-~d~~ 161 (314)
+|.+.|.+.-..+.+.++| |.+|. +|..
T Consensus 163 -~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~~~ 194 (373)
T 1nc5_A 163 -ELFDQVVLQESLMRKHTKDAKTGLFYHAWDEA 194 (373)
T ss_dssp -HHHHHHHHHHHHHHHHHBCTTTSCBCSEEETT
T ss_pred -HHHHHHHHHHHHHHHHhcCCCCCCEEeecCCc
Confidence 4666676666677777886 33544 6543
No 39
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=65.40 E-value=31 Score=31.53 Aligned_cols=86 Identities=9% Similarity=0.016 Sum_probs=53.7
Q ss_pred HHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhhCCCC--C-ccccc---CCCC-chH--HhHHHHHHHHHHHHHHH
Q psy5277 55 IVSIYRDYALH---KDIRFLTRVYPTCLELIRKCESFDKQG--L-GIVQN---GGFP-DQT--AYCGGLHIAALACMVEM 122 (314)
Q Consensus 55 i~~~~~y~~~T---gD~~fl~~~~p~vk~al~~~~~~d~d~--d-GL~~~---~g~~-d~t--~~~~al~y~AL~~~a~l 122 (314)
|.+..+-++.+ |+.+++ ..++++++|+.+.-.|. . |+... .|.+ +.+ .+.++.+..| ++++
T Consensus 62 l~~~a~a~~~~~~~~~~~~l----~~A~~~~~fl~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a---~~~~ 134 (402)
T 1fp3_A 62 VWMYCRLYRKLERFHRPELL----DAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMA---MNEL 134 (402)
T ss_dssp HHHHHHHHHHCGGGCCHHHH----HHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHH---HHHH
T ss_pred HHHHHHHHHHhcccCCHHHH----HHHHHHHHHHHHhccCcCCCCceEEEECCCCCccccccchHHHHHHHHH---HHHH
Confidence 55555557765 887655 47899999998842332 2 55532 1111 101 5667766555 4556
Q ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhCc
Q psy5277 123 SSLLNDTQQQQQFSAKLTKASQVYHDLLW 151 (314)
Q Consensus 123 A~~lG~~~~a~~~~~~a~~~k~~~~~~lW 151 (314)
++..|++ .|.+.|.++-+.+.+++|
T Consensus 135 ~~atgd~----~~~~~A~~l~~~~~~~~~ 159 (402)
T 1fp3_A 135 WRVTAEA----RYQSEAVDMMDQIVHWVR 159 (402)
T ss_dssp HHHHCCH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCH----HHHHHHHHHHHHHHHHhc
Confidence 6666765 577778888888888888
No 40
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=63.55 E-value=42 Score=31.76 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=62.8
Q ss_pred CCcccccChhHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHhhCCCCCcccccCC-----C--C-chHHhHHHHHH
Q psy5277 44 VSDWKDLNLKFIVSIYRDYALHKDIR--FLTRVYPTCLELIRKCESFDKQGLGIVQNGG-----F--P-DQTAYCGGLHI 113 (314)
Q Consensus 44 ~~~w~D~~~~fi~~~~~y~~~TgD~~--fl~~~~p~vk~al~~~~~~d~d~dGL~~~~g-----~--~-d~t~~~~al~y 113 (314)
...|.|....-+..+.++.+.|||.+ ++++....++...+++ +| .++||+.+.. . . -| +--|+.+.
T Consensus 197 ~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~l--~D-~~tGL~~Hg~~~~~~~~~~~~W-aRGnGW~~ 272 (445)
T 3k11_A 197 NTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADRM--FI-PEKGLYRHGWVESSTDHPAFCW-ARANGWAL 272 (445)
T ss_dssp TEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHH--EE-TTTTEECSEEETTCSSCCCCCB-HHHHHHHH
T ss_pred CceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHHhc--cc-CCCCCEeeeecCCCCCCCccee-cccchHHH
Confidence 45899985455667778899999999 8888877777666654 33 3578886431 1 1 13 45677665
Q ss_pred HHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHHHHHHhC
Q psy5277 114 AALACMVEMSSLLNDT-QQQQQFSAKLTKASQVYHDLL 150 (314)
Q Consensus 114 ~AL~~~a~lA~~lG~~-~~a~~~~~~a~~~k~~~~~~l 150 (314)
.++- ++.+.+.+. ..-+++.+.++++.+++.+..
T Consensus 273 ~gl~---~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q 307 (445)
T 3k11_A 273 LTAC---ELLDVLPEDYPQRPKVMDYFRAHVRGVTALQ 307 (445)
T ss_dssp HHHH---HHHHHSCTTCTTHHHHHHHHHHHHHHHHTTC
T ss_pred HHHH---HHHHhcccccccHHHHHHHHHHHHHHHHHhC
Confidence 5543 444444321 124567777777777776544
No 41
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=62.30 E-value=15 Score=34.28 Aligned_cols=93 Identities=5% Similarity=-0.124 Sum_probs=56.4
Q ss_pred cChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCC-CcccccCCCCch-----HHhHHHHHHHHHHHHHHHH
Q psy5277 50 LNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQG-LGIVQNGGFPDQ-----TAYCGGLHIAALACMVEMS 123 (314)
Q Consensus 50 ~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~-dGL~~~~g~~d~-----t~~~~al~y~AL~~~a~lA 123 (314)
++.+.|.++-. |+.|||..+++ .+++..+++.++-.|+ +|........+. ....|+.- .++.++++++
T Consensus 112 d~Af~i~al~~-~~~tg~~~~l~----~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m-~~~~al~~l~ 185 (421)
T 2zbl_A 112 QHFFALLGAAS-AVTTGHPEARK----LLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANM-HAVEAFLIVY 185 (421)
T ss_dssp HHHHHHHHHHH-HHTTTCTTHHH----HHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHhCCccHHH----HHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHH-HHHHHHHHHH
Confidence 34445556666 89999987764 4556677777632232 454332110111 02233322 3467778888
Q ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHhCcC
Q psy5277 124 SLLNDTQQQQQFSAKLTKASQVYHDLLWT 152 (314)
Q Consensus 124 ~~lG~~~~a~~~~~~a~~~k~~~~~~lW~ 152 (314)
+..|++ +|.+.|+++-+.+.+.+++
T Consensus 186 ~~tgd~----~~~~~A~~~~~~~~~~~~~ 210 (421)
T 2zbl_A 186 DVTHDK----KWLDRALRIASVIIHDVAR 210 (421)
T ss_dssp HTTCCT----HHHHHHHHHHHHHCCCCCG
T ss_pred HhhCCH----HHHHHHHHHHHHHHHHhcc
Confidence 889886 5778888888888887776
No 42
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=52.35 E-value=39 Score=31.07 Aligned_cols=100 Identities=12% Similarity=-0.009 Sum_probs=66.7
Q ss_pred ccCCcccccChhHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhhCCCCCcccccC----CCCchHHhHHHHHHH
Q psy5277 42 FDVSDWKDLNLKFIVSIYRDYALHK---DIRFLTRVYPTCLELIRKCESFDKQGLGIVQNG----GFPDQTAYCGGLHIA 114 (314)
Q Consensus 42 ~D~~~w~D~~~~fi~~~~~y~~~Tg---D~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~~----g~~d~t~~~~al~y~ 114 (314)
.+.+.|.-.+-|+++++-+.++... +..--+++...+++.++++.++ .+++|+-... ..... +-.+|++..
T Consensus 226 ~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~-q~~~G~W~~~~d~~~~y~E-sSatA~~ay 303 (382)
T 3pmm_A 226 FARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAEC-QDDSGLWHTLLDDPHSYLE-ASATAGFAY 303 (382)
T ss_dssp TTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHH-CCTTSCEESBTTCTTSCEE-HHHHHHHHH
T ss_pred CCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHc-CCCCCChhhccCCCCCCcc-ccHHHHHHH
Confidence 4788899999999999999988731 2233345556788888888886 4578875521 00112 345556666
Q ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHh
Q psy5277 115 ALACMVEMSSLLNDTQQQQQFSAKLTKASQVYHDL 149 (314)
Q Consensus 115 AL~~~a~lA~~lG~~~~a~~~~~~a~~~k~~~~~~ 149 (314)
+|..++++. .|. ++|...|+++-+++.++
T Consensus 304 ~ll~~~~~g-~l~-----~~Y~~~a~ka~~~l~~~ 332 (382)
T 3pmm_A 304 GILKAVRKR-YVG-----QHYAGVAEKAIRGIVQN 332 (382)
T ss_dssp HHHHHHHTT-SSC-----GGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC-CCc-----HHHHHHHHHHHHHHHhh
Confidence 666655532 232 46999999999988865
No 43
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=49.82 E-value=59 Score=29.56 Aligned_cols=99 Identities=11% Similarity=0.036 Sum_probs=58.9
Q ss_pred CcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCcccccCC--------------CC--chHHhH
Q psy5277 45 SDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESFDKQGLGIVQNGG--------------FP--DQTAYC 108 (314)
Q Consensus 45 ~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~d~d~dGL~~~~g--------------~~--d~t~~~ 108 (314)
..|.|....-+..+.++++.|||.++++.....+...++.+ .| .++||+.+.. .. -| +--
T Consensus 139 ~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l--~D-~~tGl~~h~~~~~~~~~w~d~~tg~~~~~W-aRg 214 (373)
T 1nc5_A 139 QMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHT--KD-AKTGLFYHAWDEAKKMPWANEETGCSPEFW-ARS 214 (373)
T ss_dssp EEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHH--BC-TTTSCBCSEEETTCCSTTSCTTTCBCSCCB-HHH
T ss_pred eEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHh--cC-CCCCCEEeecCCccccccccccCCCCCCcc-cch
Confidence 57888866566777899999999998876655554444432 33 3578886421 00 11 344
Q ss_pred HHHHHHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHHHHHHhC
Q psy5277 109 GGLHIAALACMVEMSSLLNDT-QQQQQFSAKLTKASQVYHDLL 150 (314)
Q Consensus 109 ~al~y~AL~~~a~lA~~lG~~-~~a~~~~~~a~~~k~~~~~~l 150 (314)
|+....+ +.++.+.+-+. ..-++|.+.++++.+++.+..
T Consensus 215 ~gW~~~g---l~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q 254 (373)
T 1nc5_A 215 IGWYVMS---LADMIEELPKKHPNRHVWKNTLQDMIKSICRYQ 254 (373)
T ss_dssp HHHHHHH---HHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HhHHHHH---HHHHHHhCCccchhHHHHHHHHHHHHHHHHHhc
Confidence 5544433 33444444221 224678888888888877554
No 44
>1l1y_A Cellobiohydrolase; alpha/alpha barrel; HET: BGC; 2.40A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1l2a_A*
Probab=42.61 E-value=42 Score=32.68 Aligned_cols=57 Identities=12% Similarity=-0.021 Sum_probs=42.0
Q ss_pred cCCCccccccCCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhh-CCCCCc
Q psy5277 34 SLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESF-DKQGLG 94 (314)
Q Consensus 34 ~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~-d~d~dG 94 (314)
...|.|.......|.--+.|=+--|.+||..|||.. .-..|+|.+.|..+. .++++|
T Consensus 426 d~~PVYhDPpSN~WfG~QaWsmeRvAeyYY~tGd~~----Ak~ildKWv~W~~~~~~~~~~G 483 (678)
T 1l1y_A 426 VPHPVYADPGSNQWFGFQAWSMQRVMEYYLETGDSS----VKNLIKKWVDWVMSEIKLYDDG 483 (678)
T ss_dssp ESSCSCBTTBTTCBTHHHHHHHHHHHHHHHHHCCGG----GHHHHHHHHHHHHTTCEECTTS
T ss_pred ccCCccCCCCCCCccccchhhHHHHHHHHHhcccHH----HHHHHHHHHHHHHhceEECCCC
Confidence 356777777788997777777888889999999963 345678899999872 344454
No 45
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=31.62 E-value=59 Score=31.36 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=35.3
Q ss_pred CCCccHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhCC
Q psy5277 237 EVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRTVYERTGL 276 (314)
Q Consensus 237 ~vW~~~~~~lA~~~~~~G~~~~A~~l~~~~~~~~~~~~g~ 276 (314)
++|.|++++.+.++...|+.+.|+.+++.+...+ ++.|.
T Consensus 125 ~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~-~~~G~ 163 (535)
T 2jg0_A 125 EVYYWDSYFTMLGLAESGHWDKVADMVANFAHEI-DTYGH 163 (535)
T ss_dssp SCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHSS
T ss_pred ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh-ccCCc
Confidence 6899999999999999999999999999988887 77886
No 46
>4fus_A RTX toxins and related Ca2+-binding protein; glycosyl hydrolase, GH48, hydrolase; HET: OHI CBI GOL; 1.75A {Hahella chejuensis}
Probab=31.00 E-value=1.1e+02 Score=29.97 Aligned_cols=50 Identities=12% Similarity=-0.023 Sum_probs=38.6
Q ss_pred cCCCccccccCCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh
Q psy5277 34 SLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCES 87 (314)
Q Consensus 34 ~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~ 87 (314)
...|.|.......|.--+.|=+--|.+||..|||.. .-..|.|.+.|.++
T Consensus 425 d~~PVYhDPpSN~WfG~QaWsmeRvAeyYY~tGd~~----Ak~ildKWv~W~~~ 474 (695)
T 4fus_A 425 DENPVYHDPGSGTWFGWQAWSMQRVAEYYYLKGDAQ----AKQLMDKWAPWVLS 474 (695)
T ss_dssp ESSCSCBTTBTTTBTHHHHHHHHHHHHHHHHHCCHH----HHHHHHHHHHHHHH
T ss_pred ccCccccCCCCCCccccccccHHHHHHHHHHcccHH----HHHHHHHHHHHHHh
Confidence 456777777788897777777888889999999953 33467888888877
No 47
>1g9g_A Cellulase CEL48F; processive-endo, hydrolase; 1.90A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1f9o_A* 1fbo_A* 1fce_A* 1fae_A 1fbw_A* 1f9d_A* 2qno_A* 1g9j_A*
Probab=23.73 E-value=1.6e+02 Score=28.57 Aligned_cols=57 Identities=11% Similarity=-0.023 Sum_probs=41.9
Q ss_pred cCCCccccccCCcccccChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhh-CCCCCc
Q psy5277 34 SLINGYNVFDVSDWKDLNLKFIVSIYRDYALHKDIRFLTRVYPTCLELIRKCESF-DKQGLG 94 (314)
Q Consensus 34 ~~~~~y~~~D~~~w~D~~~~fi~~~~~y~~~TgD~~fl~~~~p~vk~al~~~~~~-d~d~dG 94 (314)
...|.|.......|.--+.|=+--|.+||..|||.. .-..|+|.+.|..+. ..+++|
T Consensus 398 d~~PVYhDPpSN~WfG~QaWsmeRvAeyYY~tGd~~----Ak~ildKWv~W~~~~~~~~~~G 455 (629)
T 1g9g_A 398 VENPVYADPGSNTWFGMQVWSMQRVAELYYKTGDAR----AKKLLDKWAKWINGEIKFNADG 455 (629)
T ss_dssp ESSCSCBTTBTTSBTHHHHHHHHHHHHHHHHHCCHH----HHHHHHHHHHHHHTSCEECTTS
T ss_pred ccCCccCCCCCCCccccchhhHHHHHHHHHhcccHH----HHHHHHHHHHHHHhceEECCCC
Confidence 356777776788997777777888889999999963 345688899999872 234443
Done!